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Sample records for brook trout population

  1. Simulated effects of YY-male stocking and manual suppression for eradicating nonnative Brook Trout populations

    Science.gov (United States)

    Schill, Daniel J.; Meyer, Kevin A.; Hansen, Michael J.

    2017-01-01

    Eradication of nonnative Brook Trout Salvelinus fontinalis populations is difficult to achieve with standard techniques, such as electrofishing removal or piscicides; new approaches are needed. A novel concept is to stock “supermale” hatchery fish with wild conspecifics. Supermales (MYY) have two Y-chromosomes, resulting in offspring that are all males; over time, successful supermale reproduction could eradicate the wild population. We constructed an age-structured stochastic model to investigate the effects of manually suppressing wild fish and stocking MYY fingerlings on the long-term viability of hypothetical nonnative Brook Trout populations. In streams, an annual stocking rate of supermales equivalent to 50% of wild age-0 Brook Trout density combined with an annual selective suppression rate equivalent to 50% of wild Brook Trout density resulted in a time to extirpation of only 2–4 years if supermale fitness was equivalent to wild male fitness. However, time to extirpation in streams was 5–15 years if supermale fitness was 80% lower than wild male fitness. In alpine lakes, higher supermale stocking rates and nonselective gillnetting were required to eradicate Brook Trout populations. If supermales were assumed to be as fit as wild males, however, any supermale stocking rate greater than 49% in alpine lakes or 60% in streams achieved eradication in 10 years or less, regardless of the suppression rate. Because manual suppression and the stocking of MYY fingerlings can readily be conducted at the levels assumed in our simulations, use of such an integrated pest management (IPM) approach could extirpate undesirable Brook Trout populations within reasonably short periods of time. Given the recent successful development of an MYY Brook Trout broodstock capable of producing large numbers of MYY fingerlings and given the positive results of the present simulations for both streams and alpine lakes, field testing of MYY stocking is warranted within an

  2. Dynamics and regulation of the southern brook trout (Salvelinus fontinalis) population in an Appalachian stream

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    Gary D. Grossman; Robert E. Ratajczak; C. Michael Wagner; J. Todd Petty

    2010-01-01

    1. We used information theoretic statistics [Akaike’s Information Criterion (AIC)] and regression analysis in a multiple hypothesis testing approach to assess the processes capable of explaining long-term demographic variation in a lightly exploited brook trout population in Ball Creek, NC. We sampled a 100-m-long second-order site during both spring and autumn 1991–...

  3. Broad-scale patterns of Brook Trout responses to introduced Brown Trout in New York

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    McKenna, James E.; Slattery, Michael T.; Kean M. Clifford,

    2013-01-01

    Brook Trout Salvelinus fontinalis and Brown Trout Salmo trutta are valuable sport fish that coexist in many parts of the world due to stocking introductions. Causes for the decline of Brook Trout within their native range are not clear but include competition with Brown Trout, habitat alteration, and repetitive stocking practices. New York State contains a large portion of the Brook Trout's native range, where both species are maintained by stocking and other management actions. We used artificial neural network models, regression, principal components analysis, and simulation to evaluate the effects of Brown Trout, environmental conditions, and stocking on the distribution of Brook Trout in the center of their native range. We found evidence for the decline of Brook Trout in the presence of Brown Trout across many watersheds; 22% of sampled reaches where both species were expected to occur contained only Brown Trout. However, a model of the direct relationship between Brook Trout and Brown Trout abundance explained less than 1% of data variation. Ordination showed extensive overlap of Brook Trout and Brown Trout habitat conditions, with only small components of the hypervolume (multidimensional space) being distinctive. Subsequent analysis indicated higher abundances of Brook Trout in highly forested areas, while Brown Trout were more abundant in areas with relatively high proportions of agriculture. Simulation results indicated that direct interactions and habitat conditions were relatively minor factors compared with the effects of repeated stocking of Brown Trout into Brook Trout habitat. Intensive annual stocking of Brown Trout could eliminate resident Brook Trout in less than a decade. Ecological differences, harvest behavior, and other habitat changes can exacerbate Brook Trout losses. Custom stocking scenarios with Brown Trout introductions at relatively low proportions of resident Brook Trout populations may be able to sustain healthy populations of both

  4. Sibship reconstruction for inferring mating systems, dispersal and effective population size in headwater brook trout (Salvelinus fontinalis) populations

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    Kanno, Yoichiro; Vokoun, Jason C.; Letcher, Benjamin H.

    2011-01-01

    Brook trout Salvelinus fontinalis populations have declined in much of the native range in eastern North America and populations are typically relegated to small headwater streams in Connecticut, USA. We used sibship reconstruction to infer mating systems, dispersal and effective population size of resident (non-anadromous) brook trout in two headwater stream channel networks in Connecticut. Brook trout were captured via backpack electrofishing using spatially continuous sampling in the two headwaters (channel network lengths of 4.4 and 7.7 km). Eight microsatellite loci were genotyped in a total of 740 individuals (80–140 mm) subsampled in a stratified random design from all 50 m-reaches in which trout were captured. Sibship reconstruction indicated that males and females were both mostly polygamous although single pair matings were also inferred. Breeder sex ratio was inferred to be nearly 1:1. Few large-sized fullsib families (>3 individuals) were inferred and the majority of individuals were inferred to have no fullsibs among those fish genotyped (family size = 1). The median stream channel distance between pairs of individuals belonging to the same large-sized fullsib families (>3 individuals) was 100 m (range: 0–1,850 m) and 250 m (range: 0–2,350 m) in the two study sites, indicating limited dispersal at least for the size class of individuals analyzed. Using a sibship assignment method, the effective population size for the two streams was estimated at 91 (95%CI: 67–123) and 210 (95%CI: 172–259), corresponding to the ratio of effective-to-census population size of 0.06 and 0.12, respectively. Both-sex polygamy, low variation in reproductive success, and a balanced sex ratio may help maintain genetic diversity of brook trout populations with small breeder sizes persisting in headwater channel networks.

  5. Population response to habitat fragmentation in a stream-dwelling brook trout population

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    Letcher, B.H.; Nislow, K.H.; Coombs, J.A.; O'Donnell, M. J.; Dubreuil, T.L.

    2007-01-01

    Fragmentation can strongly influence population persistence and expression of life-history strategies in spatially-structured populations. In this study, we directly estimated size-specific dispersal, growth, and survival of stream-dwelling brook trout in a stream network with connected and naturally-isolated tributaries. We used multiple-generation, individual-based data to develop and parameterize a size-class and location-based population projection model, allowing us to test effects of fragmentation on population dynamics at local (i.e., subpopulation) and system-wide (i.e., metapopulation) scales, and to identify demographic rates which influence the persistence of isolated and fragmented populations. In the naturally-isolated tributary, persistence was associated with higher early juvenile survival (-45% greater), shorter generation time (one-half) and strong selection against large body size compared to the open system, resulting in a stage-distribution skewed towards younger, smaller fish. Simulating barriers to upstream migration into two currently-connected tribuory populations caused rapid (2-6 generations) local extinction. These local extinctions in turn increased the likelihood of system-wide extinction, as tributaries could no longer function as population sources. Extinction could be prevented in the open system if sufficient immigrants from downstream areas were available, but the influx of individuals necessary to counteract fragmentation effects was high (7-46% of the total population annually). In the absence of sufficient immigration, a demographic change (higher early survival characteristic of the isolated tributary) was also sufficient to rescue the population from fragmentation, suggesting that the observed differences in size distributions between the naturally-isolated and open system may reflect an evolutionary response to isolation. Combined with strong genetic divergence between the isolated tributary and open system, these results

  6. Experimental test of genetic rescue in isolated populations of brook trout

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    Robinson, Zachary L.; Coombs, Jason A.; Hudy, Mark; Nislow, Keith H.; Letcher, Benjamin H.; Whiteley, Andrew R.

    2017-01-01

    Genetic rescue is an increasingly considered conservation measure to address genetic erosion associated with habitat loss and fragmentation. The resulting gene flow from facilitating migration may improve fitness and adaptive potential, but is not without risks (e.g., outbreeding depression). Here, we conducted a test of genetic rescue by translocating ten (five of each sex) brook trout (Salvelinus fontinalis) from a single source to four nearby and isolated stream populations. To control for the demographic contribution of translocated individuals, ten resident individuals (five of each sex) were removed from each recipient population. Prior to the introduction of translocated individuals, the two smallest above-barrier populations had substantially lower genetic diversity, and all populations had reduced effective number of breeders relative to adjacent below-barrier populations. In the first reproductive bout following translocation, 31 of 40 (78%) translocated individuals reproduced successfully. Translocated individuals contributed to more families than expected under random mating and generally produced larger full-sibling families. We observed relatively high (>20%) introgression in three of the four recipient populations. The translocations increased genetic diversity of recipient populations by 45% in allelic richness and 25% in expected heterozygosity. Additionally, strong evidence of hybrid vigour was observed through significantly larger body sizes of hybrid offspring relative to resident offspring in all recipient populations. Continued monitoring of these populations will test for negative fitness effects beyond the first generation. However, these results provide much-needed experimental data to inform the potential effectiveness of genetic rescue-motivated translocations.

  7. Evaluation of an Unsuccessful Brook Trout Electrofishing Removal Project in a Small Rocky Mountain Stream.

    Energy Technology Data Exchange (ETDEWEB)

    Meyer, Kevin A.; Lamansky, Jr., James A.; Schill, Daniel J.

    2006-01-26

    In the western United States, exotic brook trout Salvelinus fontinalis frequently have a deleterious effect on native salmonids, and biologists often attempt to remove brook trout from streams by means of electrofishing. Although the success of such projects typically is low, few studies have assessed the underlying mechanisms of failure, especially in terms of compensatory responses. A multiagency watershed advisory group (WAG) conducted a 3-year removal project to reduce brook trout and enhance native salmonids in 7.8 km of a southwestern Idaho stream. We evaluated the costs and success of their project in suppressing brook trout and looked for brook trout compensatory responses, such as decreased natural mortality, increased growth, increased fecundity at length, and earlier maturation. The total number of brook trout removed was 1,401 in 1998, 1,241 in 1999, and 890 in 2000; removal constituted an estimated 88% of the total number of brook trout in the stream in 1999 and 79% in 2000. Although abundance of age-1 and older brook trout declined slightly during and after the removals, abundance of age-0 brook trout increased 789% in the entire stream 2 years after the removals ceased. Total annual survival rate for age-2 and older brook trout did not decrease during the removals, and the removals failed to produce an increase in the abundance of native redband trout Oncorhynchus mykiss gairdneri. Lack of a meaningful decline and unchanged total mortality for older brook trout during the removals suggest that a compensatory response occurred in the brook trout population via reduced natural mortality, which offset the removal of large numbers of brook trout. Although we applaud WAG personnel for their goal of enhancing native salmonids by suppressing brook trout via electrofishing removal, we conclude that their efforts were unsuccessful and suggest that similar future projects elsewhere over such large stream lengths would be costly, quixotic enterprises.

  8. Brook trout use of thermal refugia and foraging habitat influenced by brown trout

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    Hitt, Nathaniel P.; Snook, Erin; Massie, Danielle L.

    2017-01-01

    The distribution of native brook trout (Salvelinus fontinalis) in eastern North America is often limited by temperature and introduced brown trout (Salmo trutta), the relative importance of which is poorly understood but critical for conservation and restoration planning. We evaluated effects of brown trout on brook trout behavior and habitat use in experimental streams across increasing temperatures (14–23 °C) with simulated groundwater upwelling zones providing thermal refugia (6–9 °C below ambient temperatures). Allopatric and sympatric trout populations increased their use of upwelling zones as ambient temperatures increased, demonstrating the importance of groundwater as thermal refugia in warming streams. Allopatric brook trout showed greater movement rates and more even spatial distributions within streams than sympatric brook trout, suggesting interference competition by brown trout for access to forage habitats located outside thermal refugia. Our results indicate that removal of introduced brown trout may facilitate native brook trout expansion and population viability in downstream reaches depending in part on the spatial configuration of groundwater upwelling zones.

  9. Density-dependent regulation of brook trout population dynamics along a core-periphery distribution gradient in a central Appalachian watershed.

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    Brock M Huntsman

    Full Text Available Spatial population models predict strong density-dependence and relatively stable population dynamics near the core of a species' distribution with increasing variance and importance of density-independent processes operating towards the population periphery. Using a 10-year data set and an information-theoretic approach, we tested a series of candidate models considering density-dependent and density-independent controls on brook trout population dynamics across a core-periphery distribution gradient within a central Appalachian watershed. We sampled seven sub-populations with study sites ranging in drainage area from 1.3-60 km(2 and long-term average densities ranging from 0.335-0.006 trout/m. Modeled response variables included per capita population growth rate of young-of-the-year, adult, and total brook trout. We also quantified a stock-recruitment relationship for the headwater population and coefficients of variability in mean trout density for all sub-populations over time. Density-dependent regulation was prevalent throughout the study area regardless of stream size. However, density-independent temperature models carried substantial weight and likely reflect the effect of year-to-year variability in water temperature on trout dispersal between cold tributaries and warm main stems. Estimated adult carrying capacities decreased exponentially with increasing stream size from 0.24 trout/m in headwaters to 0.005 trout/m in the main stem. Finally, temporal variance in brook trout population size was lowest in the high-density headwater population, tended to peak in mid-sized streams and declined slightly in the largest streams with the lowest densities. Our results provide support for the hypothesis that local density-dependent processes have a strong control on brook trout dynamics across the entire distribution gradient. However, the mechanisms of regulation likely shift from competition for limited food and space in headwater streams to

  10. Maintenance of phenotypic variation: repeatibility, heritability, and size-dependent processes in a wild brook trout population

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    Benjamin H. Letcher; Jason A Coombs; Keith H. Nislow

    2011-01-01

    Phenotypic variation in body size can result from within-cohort variation in birth dates, among-individual growth variation and size-selective processes. We explore the relative effects of these processes on the maintenance of wide observed body size variation in stream-dwelling brook trout (Salvelinus fontinalis). Based on the analyses of multiple...

  11. The evolutionary consequences of habitat fragmentation: Body morphology and coloration differentiation among brook trout populations of varying size.

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    Zastavniouk, Carol; Weir, Laura K; Fraser, Dylan J

    2017-09-01

    A reduction in population size due to habitat fragmentation can alter the relative roles of different evolutionary mechanisms in phenotypic trait differentiation. While deterministic (selection) and stochastic (genetic drift) mechanisms are expected to affect trait evolution, genetic drift may be more important than selection in small populations. We examined relationships between mature adult traits and ecological (abiotic and biotic) variables among 14 populations of brook trout. These naturally fragmented populations have shared ancestry but currently exhibit considerable variability in habitat characteristics and population size (49 habitat variation or operational sex ratio than to population size, suggesting that selection may overcome genetic drift at small population size. Phenotype-environment associations were also stronger in females than males, suggesting that natural selection due to abiotic conditions may act more strongly on females than males. Our results suggest that natural and sexual-selective pressures on phenotypic traits change during the process of habitat fragmentation, and that these changes are largely contingent upon existing habitat conditions within isolated fragments. Our study provides an improved understanding of the ecological and evolutionary consequences of habitat fragmentation and lends insight into the ability of some small populations to respond to selection and environmental change.

  12. Induction and viability of tetraploids in brook trout (Salvelinus fontinalis)

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    Brook trout (Salvelinus fontinalis) populations are threatened by introduction of invasive species, habitat loss, and habitat degradation in their native range; and are a problem invasive species in western Unites States and Canada, and in Europe. Stocking sterile triploids has been promoted as an ...

  13. Brook trout passage performance through culverts

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    Goerig, Elsa; Castro-Santos, Theodore R.; Bergeron, Normand

    2016-01-01

    Culverts can restrict access to habitat for stream-dwelling fishes. We used passive integrated transponder telemetry to quantify passage performance of >1000 wild brook trout (Salvelinus fontinalis) attempting to pass 13 culverts in Quebec under a range of hydraulic and environmental conditions. Several variables influenced passage success, including complex interactions between physiology and behavior, hydraulics, and structural characteristics. The probability of successful passage was greater through corrugated metal culverts than through smooth ones, particularly among smaller fish. Trout were also more likely to pass at warmer temperatures, but this effect diminished above 15 °C. Passage was impeded at higher flows, through culverts with steep slopes, and those with deep downstream pools. This study provides insight on factors influencing brook trout capacity to pass culverts as well as a model to estimate passage success under various conditions, with an improved resolution and accuracy over existing approaches. It also presents methods that could be used to investigate passage success of other species, with implications for connectivity of the riverscape.

  14. Feeding habits of the alien brook trout Salvelinus fontinalis and the native brown trout Salmo trutta in Czech mountain streams

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    Horká Petra

    2017-01-01

    Full Text Available Quantifying patterns of prey resource use is fundamental to identify mechanisms enabling the coexistence of related fish species. Trophic interactions between the native brown trout, Salmo trutta, and the introduced brook trout, Salvelinus fontinalis, were studied monthly from May to October in three mountain streams in Central Europe (Czech Republic. To evaluate whether the feeding habits differ between separated and coexisting populations of these species, one locality where both species coexist, and two allopatric populations of either species were studied. Across the study period, the mean stomach fullness of fish varied, being highest in spring and declining through autumn. The diet overlap (Schoener's overlap index between the species increased through the studied season (from 54.5% in July to 81.5% in October. In allopatry, both species had nearly the same feeding habits. However, in sympatry, brook trout consumed higher proportion of terrestrial invertebrates, while brown trout showed no changes either in the proportions of aquatic and terrestrial prey utilized or in the selectivity for prey categories in comparison to allopatric conditions. The dietary shift observed for brook trout, but not for brown trout, suggests that brown trout is a stronger competitor in the studied sympatric locality, leading the brook trout to change its feeding habits to reduce interspecific competition.

  15. Environmental contaminants in brook trout from Aroostook National Wildlife Refuge

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    US Fish and Wildlife Service, Department of the Interior — In June 2012, four brook trout (Salvelinus fontinalis) were collected by angling from Chapman Pond and East Loring Lake at Aroostook NWR in northeast Maine. Two...

  16. Great Smoky Mountains National Park Brook Trout Genetics

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    National Park Service, Department of the Interior — Great Smoky Mountains National Park (GRSM) is committed to monitoring ecological and evolutionary functions and processes of park ecosystems. Brook trout (Salvelinus...

  17. Brook Trout Distribution, Pacific Northwest (updated March, 2006)

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    Pacific States Marine Fisheries Commission — This dataset is a record of fish distribution and activity for BROOK TROUT contained in the StreamNet database. This feature class was created based on linear event...

  18. Conservation genetics of Lake Superior brook trout: Issues, questions, and directions

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    Wilson, C.C.; Stott, W.; Miller, L.; D'Amelio, S.; Jennings, Martin J.; Cooper, A.M.

    2008-01-01

    Parallel efforts by several genetic research groups have tackled common themes relating to management concerns about and recent rehabilitation opportunities for coaster brook trout Salvelinus fontinalis in Lake Superior. The questions that have been addressed include the evolutionary and genetic status of coaster brook trout, the degree of relatedness among coaster populations and their relationship to riverine tributary brook trout populations, and the role and effectiveness of stocking in maintaining and restoring coasters to Lake Superior. Congruent genetic results indicate that coasters are an ecotype (life history variant) rather than an evolutionarily significant unit or genetically distinct strain. Regional structure exists among brook trout stocks, coasters being produced from local populations. Introgression of hatchery genes into wild populations appears to vary regionally and may relate to local population size, habitat integrity, and anthropogenic pressures. Tracking the genetic diversity and integrity associated with captive breeding programs is helping to ensure that the fish used for stocking are representative of their source populations and appropriate for rehabilitation efforts. Comparative analysis of shared samples among collaborating laboratories is enabling standardization of genotype scoring and interpretation as well as the development of a common toolkit for assessing genetic structure and diversity. Incorporation of genetic data into rehabilitation projects will facilitate monitoring efforts and subsequent adaptive management. Together, these multifaceted efforts provide comprehensive insights into the biology of coaster brook trout and enhance restoration options. ?? Copyright by the American Fisheries Society 2008.

  19. Movement patterns of Brook Trout in a restored coastal stream system in southern Massachusetts

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    Snook, Erin L.; Letcher, Benjamin H.; Dubreuil, Todd L.; Zydlewski, Joseph; O'Donnell, Matthew J.; Whiteley, Andrew R.; Hurley, Stephen T.; Danylchuk, Andy J.

    2016-01-01

    Coastal Brook Trout (Salvelinus fontinalis) populations are found from northern Canada to New England. The extent of anadromy generally decreases with latitude, but the ecology and movements of more southern populations are poorly understood. We conducted a 33-month acoustic telemetry study of Brook Trout in Red Brook, MA, and adjacent Buttermilk Bay (marine system) using 16 fixed acoustic receivers and surgically implanting acoustic transmitters in 84 individuals. Tagged Brook Trout used the stream, estuary (50% of individuals) and bay (10% of individuals). Movements into full sea water were brief when occurring. GAMM models revealed that transitions between habitat areas occurred most often in spring and fall. Environmental data suggest that use of the saline environment is limited by summer temperatures in the bay. Movements may also be related to moon phase. Compared to more northern coastal populations of Brook Trout, the Red Brook population appears to be less anadromous overall, yet the estuarine segment of the system may have considerable ecological importance as a food resource.

  20. Brook trout (Salvelinus fontinalis extinction in small boreal lakes revealed by ephippia pigmentation: a preliminary analysis

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    Alexandre Bérubé Tellier

    2016-12-01

    Full Text Available Ephippium pigmentation is a plastic trait which can be related to a trade-off between visual predation pressure and better protection of cladoceran eggs against different types of stress. Experimental studies showed that planktivorous fish exert a greater predation pressure on individuals carrying darker ephippia, but little is known about the variation of ephippium pigmentation along gradients of fish predation pressure in natural conditions. For this study, our experimental design included four small boreal lakes with known fish assemblages. Two of the lakes have viable brook trout (Salvelinus fontinalis populations, whereas the other two lakes experienced brook trout extinctions during the 20th century. Cladoceran ephippia were extracted from sediment cores at layers corresponding to the documented post- extinction phase (1990's and from an older layer (1950's for which the brook trout population status is not known precisely. Our first objective was to determine whether brook trout extinction has a direct effect on both ephippium pigmentation and size. Our second objective was to give a preliminary assessment of the status of brook trout populations in the 1950's by comparing the variation in ephippia traits measured from this layer to those measured in the 1990's, for which the extinction patterns are well known. Cost-effective image analysis was used to assess variation in pigmentation levels in ephippia. This approach provided a proxy for the amount of melanin invested in each ephippium analysed. Our study clearly shows that ephippium pigmentation may represent a better indicator of the presence of fish predators than ephippium size, a trait that showed a less clear pattern of variation between lakes with and without fish. For the 1990's period, ephippia from fishless lakes were darker and showed a slight tendency to be larger than ephippia from lakes with brook trout. However, no clear differences in either ephippium size or pigmentation

  1. Genetic identity of brook trout in Lake Superior south shore streams: Potential for genetic monitoring of stocking and rehabilitation efforts

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    Sloss, Brian L.; Jennings, Martin J.; Franckowiak, R.; Pratt, D.M.

    2008-01-01

    Rehabilitation of migratory ('coaster') brook trout Salvelinus fontinalis along Lake Superior's south shore is a topic of high interest among resource stakeholders and management agencies. Proposed strategies for rehabilitation of this brook trout life history variant in Wisconsin include supplemental stocking, watershed management, habitat rehabilitation, harvest regulations, or a combination thereof. In an effort to evaluate the success of coaster brook trout rehabilitation efforts, we collected genetic data from four populations of interest (Whittlesey Creek, Bois Brule River, Bark River, and Graveyard Creek) and the hatchery sources used in the Whittlesey Creek supplementation experiment. We characterized the genetic diversity of 30 individuals from each of four populations using 13 microsatellite DNA loci. Levels of genetic variation were consistent with those in similar studies conducted throughout the basin. Significant genetic variation among the populations was observed, enabling adequate population delineation through assignment tests. Overall, 208 of the 211 sampled fish (98.6%) were correctly assigned to their population of origin. Simulated F1 hybrids between two hatchery strains and the Whittlesey Creek population were identifiable in the majority of attempts (90.5-100% accuracy with 0-2.5% error). The genetic markers and analytical techniques described provide the ability to monitor the concurrent coaster brook trout rehabilitation efforts along Wisconsin's Lake Superior south shore, including the detection of hybridization between hatchery and native populations. ?? Copyright by the American Fisheries Society 2008.

  2. Histopathology of fish. IV. A granuloma of brook trout

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    Wood, E.M.; Yasutake, W.T.

    1956-01-01

    In the summer of 1952, Snieszko and Griffin (1955) diagnosed kidney disease in brook trout from the Fish and Wildlife Service's station at Berlin, New Hampshire. During the examination of these fish, a peculiar lesion was observed in the vicinity of the gastric caeca. In very advanced cases, hard, glistening, white masses of tissue bearing a striking resemblance to mature testes often filled the abdominal cavity. In the initial examinations, the material was actually mistaken for normal testicular tissue. Subsequently, it was recognized as an entirely aberrant, proliferating tumor-like mass.

  3. Spatial structure of morphological and neutral genetic variation in Brook Trout

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    Kazyak, David C.; Hilderbrand, Robert H.; Keller, Stephen R.; Colaw, Mark C.; Holloway, Amanda E.; Morgan, Raymond P.; King, Timothy L.

    2015-01-01

    Brook Trout Salvelinus fontinalis exhibit exceptional levels of life history variation, remarkable genetic variability, and fine-scale population structure. In many cases, neighboring populations may be highly differentiated from one another to an extent that is comparable with species-level distinctions in other taxa. Although genetic samples have been collected from hundreds of populations and tens of thousands of individuals, little is known about whether differentiation at neutral markers reflects phenotypic differences among Brook Trout populations. We compared differentiation in morphology and neutral molecular markers among populations from four geographically proximate locations (all within 24 km) to examine how genetic diversity covaries with morphology. We found significant differences among and/or within streams for all three morphological axes examined and identified the source stream of many individuals based on morphology (52.3% classification efficiency). Although molecular and morphological differentiation among streams ranged considerably (mean pairwise FST: 0.023–0.264; pairwise PST: 0.000–0.339), the two measures were not significantly correlated. While in some cases morphological characters appear to have diverged to a greater extent than expected by neutral genetic drift, many traits were conserved to a greater extent than were neutral genetic markers. Thus, while Brook Trout exhibit fine-scale spatial patterns in both morphology and neutral genetic diversity, these types of biological variabilities are being structured by different ecological and evolutionary processes. The relative influences of genetic drift versus selection and phenotypic plasticity in shaping morphology appear to vary among populations occupying nearby streams.

  4. Landscape models of brook trout abundance and distribution in lotic habitat with field validation

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    McKenna, James E.; Johnson, James H.

    2011-01-01

    Brook trout Salvelinus fontinalis are native fish in decline owing to environmental changes. Predictions of their potential distribution and a better understanding of their relationship to habitat conditions would enhance the management and conservation of this valuable species. We used over 7,800 brook trout observations throughout New York State and georeferenced, multiscale landscape condition data to develop four regionally specific artificial neural network models to predict brook trout abundance in rivers and streams. Land cover data provided a general signature of human activity, but other habitat variables were resistant to anthropogenic changes (i.e., changing on a geological time scale). The resulting models predict the potential for any stream to support brook trout. The models were validated by holding 20% of the data out as a test set and by comparison with additional field collections from a variety of habitat types. The models performed well, explaining more than 90% of data variability. Errors were often associated with small spatial displacements of predicted values. When compared with the additional field collections (39 sites), 92% of the predictions were off by only a single class from the field-observed abundances. Among “least-disturbed” field collection sites, all predictions were correct or off by a single abundance class, except for one where brown trout Salmo trutta were present. Other degrading factors were evident at most sites where brook trout were absent or less abundant than predicted. The most important habitat variables included landscape slope, stream and drainage network sizes, water temperature, and extent of forest cover. Predicted brook trout abundances were applied to all New York streams, providing a synoptic map of the distribution of brook trout habitat potential. These fish models set benchmarks of best potential for streams to support brook trout under broad-scale human influences and can assist with planning and

  5. The effects of varied densities on the growth and emigration of adult cutthroat trout and brook trout in fenced stream enclosures

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    Buys, D.J.; Hilderbrand, R.H.; Kershner, J.L.

    2009-01-01

    We evaluated the effects of various density treatments on adult fish growth and emigration rates between Bonneville cutthroat trout Oncorhynchus clarki utah and brook trout Salvelinus fontinalis in stream enclosures in Beaver Creek, Idaho, We used 3 density treatments (low, ambient, and high fish densities) to evaluate density-related effects and to ensure a response. Intraspecific ambient-density tests using cutthroat trout only were also performed. Results indicated an absence of cage effects in the stream enclosures and no differences in fish growth between ambient-density stream-enclosure fish and free-range fish. Brook trout outgrew and moved less than cutthroat trout in the stream enclosures, especially as density increased, In all 3 density treatments, brook trout gained more weight than cutthroat trout, with brook trout gaining weight in each density treatment and cutthroat trout losing weight at the highest density. At high densities, cutthroat trout attempted to emigrate more frequently than brook trout in sympatry and allopatry. We observed a negative correlation between growth and emigration for interspecific cutthroat trout, indicating a possible competitive response due to the presence of brook trout. We observed similar responses for weight and emigration in trials of allopatric cutthroat trout, indicating strong intraspecific effects as density increased. While cutthroat trout showed a response to experimental manipulation with brook trout at different densities, there has been long-term coexistence between these species in Beaver Creek, This system presents a unique opportunity to study the mechanisms that lead cutthroat trout to coexist with rather than be replaced by nonnative brook trout.

  6. Changes in seasonal climate outpace compensatory density-dependence in eastern brook trout

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    Bassar, Ronald D.; Letcher, Benjamin H.; Nislow, Keith H.; Whiteley, Andrew R.

    2016-01-01

    Understanding how multiple extrinsic (density-independent) factors and intrinsic (density-dependent) mechanisms influence population dynamics has become increasingly urgent in the face of rapidly changing climates. It is particularly unclear how multiple extrinsic factors with contrasting effects among seasons are related to declines in population numbers and changes in mean body size and whether there is a strong role for density-dependence. The primary goal of this study was to identify the roles of seasonal variation in climate driven environmental direct effects (mean stream flow and temperature) versus density-dependence on population size and mean body size in eastern brook trout (Salvelinus fontinalis). We use data from a 10-year capture-mark-recapture study of eastern brook trout in four streams in Western Massachusetts, USA to parameterize a discrete-time population projection model. The model integrates matrix modeling techniques used to characterize discrete population structures (age, habitat type and season) with integral projection models (IPMs) that characterize demographic rates as continuous functions of organismal traits (in this case body size). Using both stochastic and deterministic analyses we show that decreases in population size are due to changes in stream flow and temperature and that these changes are larger than what can be compensated for through density-dependent responses. We also show that the declines are due mostly to increasing mean stream temperatures decreasing the survival of the youngest age class. In contrast, increases in mean body size over the same period are the result of indirect changes in density with a lesser direct role of climate-driven environmental change.

  7. A comparative and experimental evaluation of performance of stocked diploid and triploid brook trout

    Science.gov (United States)

    Budy, Phaedra E.; Thiede, G.P.; Dean, A.; Olsen, D.; Rowley, G.

    2012-01-01

    Despite numerous negative impacts, nonnative trout are still being stocked to provide economically and socially valuable sport fisheries in western mountain lakes. We evaluated relative performance and potential differences in feeding strategy and competitive ability of triploid versus diploid brook trout Salvelinus fontinalis in alpine lakes, as well as behavioral and performance differences of diploid and triploid brook trout in two controlled experimental settings: behavioral experiments in the laboratory and performance evaluations in ponds. Across lakes, catch per unit effort (CPUE) and relative weight (Wr ) were not significantly different between ploidy levels. Mean sizes were also similar between ploidy levels except in two of the larger lakes where diploids attained slightly larger sizes (approximately 20 mm longer). We observed no significant differences between diploids and triploids in diet, diet preference, or trophic structure. Similarly, growth and condition did not differ between ploidy levels in smaller-scale pond experiments, and aggressive behavior did not differ between ploidy levels (fed or unfed fish trials) in the laboratory. Independent of ploidy level, the relative performance of brook trout varied widely among lakes, a pattern that appeared to be a function of lake size or a factor that covaries with lake size such as temperature regime or carrying capacity. In summary, we observed no significant differences in the relative performance of brook trout from either ploidy level across a number of indices, systems, and environmental conditions, nor any indication that one group is more aggressive or a superior competitor than the other. Collectively, these results suggest that triploid brook trout will offer a more risk-averse and promising management opportunity when they are stocked to these lakes and elsewhere to simultaneously meet the needs for the sport fishery and conservation objectives.

  8. Endocrine disruption in brook trout (Salvelinus fontinalis) exposed to leachate from a public refuse dump

    NARCIS (Netherlands)

    Noaksson, E.; Linderoth, M.; Bosveld, A.T.C.; Norrgren, L.; Zebühr, Y.; Balk, L.

    2003-01-01

    Lake Molnbyggen was previously found to harbour a large number of sexually immature female perch (Perca fluviatilis) suffering from endocrine disruption. In an attempt to pin-point the source of the endocrine-disrupting substance(s) (EDSs), brook trout (Salvelinus fontinalis) from Vadbacken, a strea

  9. Hiding in Plain Sight: A Case for Cryptic Metapopulations in Brook Trout (Salvelinus fontinalis.

    Directory of Open Access Journals (Sweden)

    David C Kazyak

    Full Text Available A fundamental issue in the management and conservation of biodiversity is how to define a population. Spatially contiguous fish occupying a stream network have often been considered to represent a single, homogenous population. However, they may also represent multiple discrete populations, a single population with genetic isolation-by-distance, or a metapopulation. We used microsatellite DNA and a large-scale mark-recapture study to assess population structure in a spatially contiguous sample of Brook Trout (Salvelinus fontinalis, a species of conservation concern. We found evidence for limited genetic exchange across small spatial scales and in the absence of barriers to physical movement. Mark-recapture and stationary passive integrated transponder antenna records demonstrated that fish from two tributaries very seldom moved into the opposite tributary, but movements between the tributaries and mainstem were more common. Using Bayesian genetic clustering, we identified two genetic groups that exhibited significantly different growth rates over three years of study, yet survival rates were very similar. Our study highlights the importance of considering the possibility of multiple genetically distinct populations occurring within spatially contiguous habitats, and suggests the existence of a cryptic metapopulation: a spatially continuous distribution of organisms exhibiting metapopulation-like behaviors.

  10. Influence of species, size and relative abundance on the outcomes of competitive interactions between brook trout and juvenile coho salmon

    Science.gov (United States)

    Thornton, Emily J; Duda, Jeff; Quinn, Thomas P

    2016-01-01

    Resource competition between animals is influenced by a number of factors including the species, size and relative abundance of competing individuals. Stream-dwelling animals often experience variably available food resources, and some employ territorial behaviors to increase their access to food. We investigated the factors that affect dominance between resident, non-native brook trout and recolonizing juvenile coho salmon in the Elwha River, WA, USA, to see if brook trout are likely to disrupt coho salmon recolonization via interference competition. During dyadic laboratory feeding trials, we hypothesized that fish size, not species, would determine which individuals consumed the most food items, and that species would have no effect. We found that species, not size, played a significant role in dominance; coho salmon won 95% of trials, even when only 52% the length of their brook trout competitors. As the pairs of competing fish spent more time together during a trial sequence, coho salmon began to consume more food, and brook trout began to lose more, suggesting that the results of early trials influenced fish performance later. In group trials, we hypothesized that group composition and species would not influence fish foraging success. In single species groups, coho salmon consumed more than brook trout, but the ranges overlapped. Brook trout consumption remained constant through all treatments, but coho salmon consumed more food in treatments with fewer coho salmon, suggesting that coho salmon experienced more intra- than inter-specific competition and that brook trout do not pose a substantial challenge. Based on our results, we think it is unlikely that competition from brook trout will disrupt Elwha River recolonization by coho salmon.

  11. Breaking the speed limit--comparative sprinting performance of brook trout (Salvelinus fontinalis) and brown trout (Salmo trutta)

    Science.gov (United States)

    Castro-Santos, Theodore; Sanz-Ronda, Francisco Javier; Ruiz-Legazpi, Jorge

    2013-01-01

    Sprinting behavior of free-ranging fish has long been thought to exceed that of captive fish. Here we present data from wild-caught brook trout (Salvelinus fontinalis) and brown trout (Salmo trutta), volitionally entering and sprinting against high-velocity flows in an open-channel flume. Performance of the two species was nearly identical, with the species attaining absolute speeds > 25 body lengths·s−1. These speeds far exceed previously published observations for any salmonid species and contribute to the mounting evidence that commonly accepted estimates of swimming performance are low. Brook trout demonstrated two distinct modes in the relationship between swim speed and fatigue time, similar to the shift from prolonged to sprint mode described by other authors, but in this case occurring at speeds > 19 body lengths·s−1. This is the first demonstration of multiple modes of sprint swimming at such high swim speeds. Neither species optimized for distance maximization, however, indicating that physiological limits alone are poor predictors of swimming performance. By combining distributions of volitional swim speeds with endurance, we were able to account for >80% of the variation in distance traversed by both species.

  12. Can personality predict individual differences in brook trout spatial learning ability?

    Science.gov (United States)

    White, S L; Wagner, T; Gowan, C; Braithwaite, V A

    2017-08-01

    While differences in individual personality are common in animal populations, understanding the ecological significance of variation has not yet been resolved. Evidence suggests that personality may influence learning and memory; a finding that could improve our understanding of the evolutionary processes that produce and maintain intraspecific behavioural heterogeneity. Here, we tested whether boldness, the most studied personality trait in fish, could predict learning ability in brook trout. After quantifying boldness, fish were trained to find a hidden food patch in a maze environment. Stable landmark cues were provided to indicate the location of food and, at the conclusion of training, cues were rearranged to test for learning. There was a negative relationship between boldness and learning as shy fish were increasingly more successful at navigating the maze and locating food during training trials compared to bold fish. In the altered testing environment, only shy fish continued using cues to search for food. Overall, the learning rate of bold fish was found to be lower than that of shy fish for several metrics suggesting that personality could have widespread effects on behaviour. Because learning can increase plasticity to environmental change, these results have significant implications for fish conservation. Copyright © 2016 Elsevier B.V. All rights reserved.

  13. Intraspecific growth variation among rainbow trout and brook trout: Impact of initial body weight and feeding level

    DEFF Research Database (Denmark)

    Rasmussen, Richard Skøtt; Ostenfeld, T.

    2010-01-01

    for RT-L (5.91) than for all other groups (RT-H: 1.50, P feed was restricted. Overall, ration level had large impact on slopes (H: 1.63, L: 4.39, P ...This study describes growth variation within groups of salmonids and the relation to initial fish weights and feeding levels. PIT-tagged rainbow trout (RT) and brook trout (BT) of start weight 120–170 g were reared in separate tanks for 9 weeks. Both species were fed each day either a high ration...... in each tank in each period was applied as indicator for this propensity (termed “slope”). All calculated slopes in the experiment were positive which indicates the general ability of weighty fish to gain more weight than smaller individuals. The average slope during all 9 weeks was 2–4 times higher...

  14. Effect of postthaw storage time and sperm-to-egg ratio on fertility of cryopreserved brook trout sperm.

    Science.gov (United States)

    Nynca, J; Dietrich, G J; Dobosz, S; Zalewski, T; Ciereszko, A

    2015-01-15

    The aim of this study was to test the influence of postthaw storage time on sperm motility parameters of brook trout (n = 9). Furthermore, we examined the effect of sperm-to-egg ratios of 300,000:1 and 600,000:1 on fertility of postthaw, cryopreserved, brook trout sperm. The application of a cryopreservation procedure produced very high postthaw sperm motility (56.8 ± 4.0%). The cryopreserved sperm of brook trout could be stored up to 60 minutes without loss of the percentage of sperm motility (52.0 ± 9.0%). The fertilization capacity of brook trout postthaw sperm was comparable with the fertilization rate of fresh semen at a sperm-to-egg ratio as low as 300,000:1 (42.4 ± 14.0% and 36.5 ± 11.0% for eyed and hatched stages, respectively). The possibility of postthaw semen storage for the prolonged time and the obtainment of high fertilization rate at low sperm-to-egg ratio can lead to the significant improvement of brook trout semen cryopreservation procedure.

  15. Intraspecific variation in thermal tolerance and acclimation capacity in brook trout (Salvelinus fontinalis): physiological implications for climate change.

    Science.gov (United States)

    Stitt, Bradley C; Burness, Gary; Burgomaster, Kirsten A; Currie, Suzanne; McDermid, Jenni L; Wilson, Chris C

    2014-01-01

    Cold-water fishes are becoming increasingly vulnerable as changing thermal conditions threaten their future sustainability. Thermal stress and habitat loss from increasing water temperatures are expected to impact population viability, particularly for inland populations with limited adaptive resources. Although the long-term persistence of cold-adapted species will depend on their ability to cope with and adapt to changing thermal conditions, very little is known about the scope and variation of thermal tolerance within and among conspecific populations and evolutionary lineages. We studied the upper thermal tolerance and capacity for acclimation in three captive populations of brook trout (Salvelinus fontinalis) from different ancestral thermal environments. Populations differed in their upper thermal tolerance and capacity for acclimation, consistent with their ancestry: the northernmost strain (Lake Nipigon) had the lowest thermal tolerance, while the strain with the most southern ancestry (Hill's Lake) had the highest thermal tolerance. Standard metabolic rate increased following acclimation to warm temperatures, but the response to acclimation varied among strains, suggesting that climatic warming may have differential effects across populations. Swimming performance varied among strains and among acclimation temperatures, but strains responded in a similar way to temperature acclimation. To explore potential physiological mechanisms underlying intraspecific differences in thermal tolerance, we quantified inducible and constitutive heat shock proteins (HSP70 and HSC70, respectively). HSPs were associated with variation in thermal tolerance among strains and acclimation temperatures; HSP70 in cardiac and white muscle tissues exhibited similar patterns, whereas expression in hepatic tissue varied among acclimation temperatures but not strains. Taken together, these results suggest that populations of brook trout will vary in their ability to cope with a

  16. DETECTION OF RENIBACTERIUM SALMONINARUM IN TISSUE OF BROOK TROUT (SALVELINUS FONTINALIS BY NESTED RT–PCR

    Directory of Open Access Journals (Sweden)

    Irena Vardić

    2007-01-01

    Full Text Available Pathogenic bacterium Renibacterium salmoninarum causes kidney disease with high mortality rate and considerable economic losses in salmonid farming. Thus, application of fast and sensitive method for R. salmoninarum diagnosis is of great importance. This paper describes detection of R. salmoninarum in brook trout tissue with gross clinical signs of disease by nested RT–PCR. Determination of partial sequence of bacterial msa gene was done prior to comparison with similar sequences from different R. salmoninarum isolates. Nested RT–PCR proved to be a rapid and valuable diagnostic tool for R. salmoninarum detection, and sequence analysis confirmed previously reported genetic uniformity of this bacteria

  17. Genome evolution in the fish family salmonidae: generation of a brook charr genetic map and comparisons among charrs (Arctic charr and brook charr with rainbow trout

    Directory of Open Access Journals (Sweden)

    Moghadam Hooman K

    2011-07-01

    Full Text Available Abstract Background Salmonids are regarded as 4R derivative species, having experienced 4 whole genome duplication events in their ancestry. Many duplicated chromosome regions still share extensive homology with one another which is maintained primarily through male-based homeologous chromosome pairings during meiosis. The formation of quadrivalents during meiosis leads to pseudolinkage. This phenomenon is more prevalent within 5 of the 12 ancestral teleost linkage groups in salmonids. Results We constructed a genetic linkage map for brook charr and used this in combination with the genetic map from Arctic charr, to make comparisons with the genetic map of rainbow trout. Although not all chromosome arms are currently mapped, some homologous chromosome rearrangements were evident between Arctic charr and brook charr. Notably, 10 chromosome arms in brook charr representing 5 metacentric chromosomes in Arctic charr have undergone rearrangements. Three metacentrics have one arm translocated and fused with another chromosome arm in brook charr to a make a new metacentrics while two metacentrics are represented by 4 acrocentric pairs in brook charr. In two cases (i.e., BC-4 and BC-16, an apparent polymorphism was observed with the identification of both a putative metacentric structure (similar to metacentric AC-4 = BC-4 and a joining of acrocentric AC-16 + one arm of AC-28 = BC-16, as well as two separate acrocentric linkage groups evident in the mapping parents. Forty-six of the expected 50 karyotypic arms could be inter-generically assigned. SEX in brook charr (BC-4 was localized to the same homologous linkage group region as in Arctic charr (AC-4. The homeologous affinities detected in the two charr species facilitated the identification of 20 (expected number = 25 shared syntenic regions with rainbow trout, although it is likely that some of these regions were partial or overlapping arm regions. Conclusions Inter-generic comparisons among 2

  18. SEX-LINKED CHANGES IN PHASE 1 BIOTRANSFORMATION OF PHENOL IN BROOK TROUT OVER AN ANNUAL REPRODUCTIVE CYCLE

    Science.gov (United States)

    The microsomal metabolism of phenol (11 degrees C) over an annual reproductive cycle from June to December has been studied using fall spawning adult brook trout (Salvelinus fontinalis). Incubations were optimized for time, cofactor connection, pH, and microsomal protein concentr...

  19. Thermal onset of cellular and endocrine stress responses correspond to ecological limits in brook trout, an iconic cold-water fish

    Science.gov (United States)

    Chadwick, Joseph G; Nislow, Kieth H; McCormick, Stephen

    2015-01-01

    Climate change is predicted to change the distribution and abundance of species, yet underlying physiological mechanisms are complex and methods for detecting populations at risk from rising temperature are poorly developed. There is increasing interest in using physiological mediators of the stress response as indicators of individual and population-level response to environmental stressors. Here, we use laboratory experiments to show that the temperature thresholds in brook trout (Salvelinus fontinalis) for increased gill heat shock protein-70 (20.7°C) and plasma glucose (21.2°C) are similar to their proposed thermal ecological limit of 21.0°C. Field assays demonstrated increased plasma glucose, cortisol and heat shock protein-70 concentrations at field sites where mean daily temperature exceeded 21.0°C. Furthermore, population densities of brook trout were lowest at field sites where temperatures were warm enough to induce a stress response, and a co-occurring species with a higher thermal tolerance showed no evidence of physiological stress at a warm site. The congruence of stress responses and proposed thermal limits supports the use of these thresholds in models of changes in trout distribution under climate change scenarios and suggests that the induction of the stress response by elevated temperature may play a key role in driving the distribution of species.

  20. Physiological and biochemical responses of rainbow trout and brook trout exposed to elevated selenium from coal mines

    Energy Technology Data Exchange (ETDEWEB)

    Miller, L.; Rasmussen, J.; Hontela, A. [Lethbridge Univ., Lethbridge, AB (Canada); Palace, V.; Carroll, L. [Fisheries and Oceans Canada, Winnipeg, MB (Canada); Wang, F. [Manitoba Univ., Winnipeg, MB (Canada)

    2009-07-01

    Since selenium (Se) is an element that bioaccumulates, anthropogenic activities in areas that already have high Se in parent rock can result in an increase in Se in aquatic systems. Se causes reproductive deformities in rainbow trout (RT), at lower concentrations than for brook trout (BT). This presentation reported on a study conducted at coal mines in northeastern Alberta in which juvenile hatchery-reared RT and BT were stocked into 2 reference and 2 Se contaminated end pit lakes. Fish were sampled at 0, 6, and 12 months after stocking, and will be sampled at 18 and 24 months. Water Se levels were found to be high in contaminated lakes. Selenite, the more toxic form of Se, was the highest in Pit C4. Liver glutathione levels were similar in the 2 fish species, and cellular damage in the fish was beginning to increase. At 6 months, liver glycogen levels were higher in the BT than in the RT, but no tangible site specific patterns emerged. At all sites except Pit C4, the RT were in better condition than BT. BT from Pit C4 also had a lower ability to secrete cortisol, suggesting that the elevated selenite levels may negatively affect fish. Se accumulation results from 28 fish sampled at 12 months were also discussed.

  1. The physiological response of diploid and triploid brook trout to exhaustive exercise.

    Science.gov (United States)

    Hyndman, C A; Kieffer, J D; Benfey, T J

    2003-01-01

    Using triploidy as an experimental model, we examined whether cell size limits the post-exercise recovery process in fish. Because triploids generally possess larger cells, which could affect many physiological and biochemical processes, we hypothesized that triploids would take longer to recover from exhaustive exercise compared to diploids. To test this, we measured plasma lactate, glucose and osmolality, and white muscle energy stores (glycogen, phosphocreatine and ATP) and lactate before and immediately following exhaustive exercise and during recovery at 2 and 4 h post-exercise. In addition, oxygen consumption and ammonia excretion rates were determined before and after exhaustive exercise. Overall, diploid and triploid brook trout showed similar metabolic responses exercise, but plasma osmolality, white muscle lactate, white muscle ATP and post-exercise oxygen consumption rates recovered earlier in triploids compared to diploids. The results of this study suggest that the characteristic larger cell size of triploidy does not limit the physiological response to, or recovery from, exhaustive exercise.

  2. Concomitant Antibiotic and Mercury Resistance Among Gastrointestinal Microflora of Feral Brook Trout, Salvelinus fontinalis

    Science.gov (United States)

    Meredith, Matthew M.; Parry, Erin M.; Guay, Justin A.; Markham, Nicholas O.; Danner, G. Russell; Johnson, Keith A.; Barkay, Tamar; Fekete, Frank A.

    2013-01-01

    Twenty-nine bacterial isolates representing eight genera from the gastrointestinal tracts of feral brook trout Salvelinus fontinalis (Mitchell) demonstrated multiple maximal antibiotic resistances and concomitant broad-spectrum mercury (Hg) resistance. Equivalent viable plate counts on tryptic soy agar supplemented with either 0 or 25 μM HgCl2 verified the ubiquity of mercury resistance in this microbial environment. Mercury levels in lake water samples measured 1.5 ng L−1; mercury concentrations in fish filets ranged from 81.8 to 1,080 ng g−1 and correlated with fish length. The presence of similar antibiotic and Hg resistance patterns in multiple genera of gastrointestinal microflora supports a growing body of research that multiple selective genes can be transferred horizontally in the presence of an unrelated individual selective pressure. We present data that bioaccumulation of non-point source Hg pollution could be a selective pressure to accumulate both antibiotic and Hg resistant bacteria. PMID:22850694

  3. Pseudolinkage of the duplicate loci for supernatant aspartate aminotransferase in brook trout, Salvelinus fontinalis.

    Science.gov (United States)

    Wright, J E; May, B; Stoneking, M; Lee, G M

    1980-01-01

    Electrophoretic variation involving three alleles is described for the duplicated loci for supernatant aspartate aminotransferase (AAT-1,2), from muscle extracts of brook trout. Both loci exhibit largely disomic inheritance. Exceptional progeny types are proposed to be the result of a form of tetrasomic inheritance. Nonrandom segregation was found among the progeny of males doubly heterozygous for AAT markers; where so-called linkage phase was known, this nonrandom assortment was shown to be pseudolinkage (78.9 percent recombination). Analyses of joint segregation of triply heterozygous males for the AAT-(1,2) loci and for the single alpha glycerophosphate dehydrogenase locus (AGP-1) revealed true linkage of AGP-1 with one AAT locus (mean r = 11 percent), but pseudolinkage with the other AAT locus (r = 74 percent). Intraindividual variation for homoeologous multivalent pairing of two acrocentric with two metacentric chromosomes in males, but with bivalent pairing in females, is proposed to account for pseudolinkage and for the tetrasomically inherited types.

  4. pH preference and avoidance responses of adult brook trout Salvelinus fontinalis and brown trout Salmo trutta.

    Science.gov (United States)

    Fost, B A; Ferreri, C P

    2015-03-01

    The pH preferred and avoided by wild, adult brook trout Salvelinus fontinalis and brown trout Salmo trutta was examined in a series a laboratory tests using gradual and steep-gradient flow-through aquaria. The results were compared with those published for the observed segregation patterns of juvenile S. fontinalis and S. trutta in Pennsylvania streams. The adult S. trutta tested showed a preference for pH 4·0 while adult S. fontinalis did not prefer any pH within the range tested. Salmo trutta are not found in Pennsylvania streams with a base-flow pH pH well above 4·0. Adult S. trutta displayed a lack of avoidance at pH below 5·0, as also reported earlier for juveniles. The avoidance pH of wild, adult S. fontinalis (between pH 5·5 and 6·0) and S. trutta (between pH 6·5 and 7·0) did not differ appreciably from earlier study results for the avoidance pH of juvenile S. fontinalis and S. trutta. A comparison of c.i. around these avoidance estimates indicates that avoidance pH is similar among adult S. fontinalis and S. trutta in this study. The limited overlap of c.i. for avoidance pH values for the two species, however, suggests that some S. trutta will display avoidance at a higher pH when S. fontinalis will not. The results of this study indicate that segregation patterns of adult S. fontinalis and S. trutta in Pennsylvania streams could be related to pH and that competition with S. trutta could be mediating the occurrence of S. fontinalis at some pH levels.

  5. The physiological stress response and oxidative stress biomarkers in rainbow trout and brook trout from selenium-impacted streams in a coal mining region

    Energy Technology Data Exchange (ETDEWEB)

    Miller, L.L.; Rasmussen, J.B.; Palace, V.P.; Hontela, A. [University of Lethbridge, Lethbridge, AB (Canada). Dept. of Biological Science

    2009-11-15

    Selenium (Se) is an essential element that can be toxic at concentrations slightly greater than those required for homeostasis. The main chronic toxic effects of Se in fish are teratogenic deformities, but Se can also activate the physiological stress response and redox cycle with reduced glutathione causing oxidative damage. Rainbow trout, Oncorhynchus mykiss, appear to be more sensitive to Se than brook trout, Salvelinus fontinalis. The objective of this study was to compare the physiological stress response (plasma cortisol, glucose, triiodothyronine, thyroxine, gill Na+/K+ ATPase, cortisol secretory capacity, K and liver somatic index) and oxidative stress biomarkers (liver GSH, GPx, lipid peroxidation, vitamin A and vitamin E) in rainbow trout (RNTR) and brook trout (BKTR) collected from reference and Se-exposed streams. The physiological stress response was not impaired (cortisol secretory capacity unchanged); although there were species differences in plasma cortisol and plasma glucose levels. Liver GSH, GPx and vitamin levels were higher in RNTR than BKTR, but lipid peroxidation levels were not different. The elevated GSH reserves may make RNTR more sensitive to Se-induced lipid peroxidation, but this may be offset by the RNTR's higher antioxidant (GPx and vitamin) levels. Species-specific biochemical differences may mediate differences in Se sensitivity and be used in aquatic Se risk assessments.

  6. Can brook trout survive climate change in large rivers? If it rains.

    Science.gov (United States)

    Merriam, Eric R; Fernandez, Rodrigo; Petty, J Todd; Zegre, Nicolas

    2017-12-31

    We provide an assessment of thermal characteristics and climate change vulnerability for brook trout (Salvelinus fontinalis) habitats in the upper Shavers Fork sub-watershed, West Virginia. Spatial and temporal (2001-2015) variability in observed summer (6/1-8/31) stream temperatures was quantified in 23 (9 tributary, 14 main-stem) reaches. We developed a mixed effects model to predict site-specific mean daily stream temperature from air temperature and discharge and coupled this model with a hydrologic model to predict future (2016-2100) changes in stream temperature under low (RCP 4.5) and high (RCP 8.5) emissions scenarios. Observed mean daily stream temperature exceeded the 21°C brook trout physiological threshold in all but one main-stem site, and 3 sites exceeded proposed thermal limits for either 63- and 7-day mean stream temperature. We modeled mean daily stream temperature with a high degree of certainty (R(2)=0.93; RMSE=0.76°C). Predicted increases in mean daily stream temperature in main-stem and tributary reaches ranged from 0.2°C (RCP 4.5) to 1.2°C (RCP 8.5). Between 2091 and 2100, the average number of days with mean daily stream temperature>21°C increased within main-stem sites under the RCP 4.5 (0-1.2days) and 8.5 (0-13) scenarios; however, no site is expected to exceed 63- or 7-day thermal limits. During the warmest 10years, ≥5 main-stem sites exceeded the 63- or 7-day thermal tolerance limits under both climate emissions scenarios. Years with the greatest increases in stream temperature were characterized by low mean daily discharge. Main-stem reaches below major tributaries never exceed thermal limits, despite neighboring reaches having among the highest observed and predicted stream temperatures. Persistence of thermal refugia within upper Shavers Fork would enable persistence of metapopulation structure and life history processes. However, this will only be possible if projected increases in discharge are realized and offset expected

  7. Are brook trout streams in Western Virginia and Shenandoah National Park recovering from acidification?

    Energy Technology Data Exchange (ETDEWEB)

    James R. Webb; Bernard J. Cosby; Frank A. Deviney, Jr.; James N. Galloway; Suzanne W. Maben; Arthur J. Bulger [University of Virginia, Charlottesville, VA (United States). Department of Environmental Sciences

    2004-08-01

    Streamwater composition data obtained through periodic sampling of streams that support brook trout (Salvelinus fontinalis) in the mountains of western Virginia were examined for evidence of recovery from acidification during the 1988-2001 period. Measurements of sulfate deposition in precipitation indicate that sulfate deposition in the region declined approximately 40% between 1985 and 2000. While no significant regional trends in acid-base constituents were observed for the set (n = 65) of western Virginia study streams, significant regional trends were observed for a subset (n = 14) of streams in Shenandoah National Park (SNP). For the subset of SNP streams, the median increase in acid-neutralizing capacity (ANC) was 0.168 {mu} equiv L{sup -1} year{sup -1} and the median decrease in sulfate concentration was -0.229 {mu}equiv L{sup -1} year{sup -1}. Although these trends are consistent with recovery from acidification, the degree of apparent recovery is small compared to estimates of historic acidification in SNP streams and much less than observed in other, more northern regions in the United States. Correlation between sulfate concentration trends and current sulfate concentrations in streamwater suggests that recovery from stream acidification in the western Virginia region is determined by sulfur retention processes in watershed soils. A transient increase in nitrate concentrations that occurred among some western Virginia streams following forest defoliation by the gypsy moth (Lymantria dispar) complicates interpretation of the observed patterns of change in acid-base status. 28 refs., 6 figs., 1 tab.

  8. Analysis of brook trout spatial behavior during passage attempts in corrugated culverts using near-infrared illumination video imagery

    Science.gov (United States)

    Bergeron, Normand E.; Constantin, Pierre-Marc; Goerig, Elsa; Castro-Santos, Theodore R.

    2016-01-01

    We used video recording and near-infrared illumination to document the spatial behavior of brook trout of various sizes attempting to pass corrugated culverts under different hydraulic conditions. Semi-automated image analysis was used to digitize fish position at high temporal resolution inside the culvert, which allowed calculation of various spatial behavior metrics, including instantaneous ground and swimming speed, path complexity, distance from side walls, velocity preference ratio (mean velocity at fish lateral position/mean crosssectional velocity) as well as number and duration of stops in forward progression. The presentation summarizes the main results and discusses how they could be used to improve fish passage performance in culverts.

  9. Geomorphic, flood, and groundwater-flow characteristics of Bayfield Peninsula streams, Wisconsin, and implications for brook-trout habitat

    Science.gov (United States)

    Fitzpatrick, Faith A.; Peppler, Marie C.; Saad, David A.; Pratt, Dennis M.; Lenz, Bernard N.

    2015-01-01

    In 2002–03, the U.S. Geological Survey conducted a study of the geomorphic, flood, and groundwater-flow characteristics of five Bayfield Peninsula streams, Wisconsin (Cranberry River, Bark River, Raspberry River, Sioux River, and Whittlesey Creek) to determine the physical limitations for brook-trout habitat. The goals of the study were threefold: (1) to describe geomorphic characteristics and processes, (2) to determine how land-cover characteristics affect flood peaks, and (3) to determine how regional groundwater flow patterns affect base flow.

  10. Bull Trout Life History, Genetics, Habitat Needs, and Limiting Factors in Central and Northeast Oregon. Annual Report 1996.

    Energy Technology Data Exchange (ETDEWEB)

    Bellerud, Blane L.; Gunckel, Stephanie; Hemmingsen, Alan R.; Buchanan, David V.; Howell, Philip J.

    1997-10-01

    This study is part of a multi-year research project studying aspects of bull trout life history, ecology and genetics. This report covers the activities of the project in 1996. Results and analysis are presented in the following five areas: (1) analysis of the genetic structure of Oregon bull trout populations; (2) distribution and habitat use of bull trout and brook trout in streams containing both species; (3) bull trout spawning surveys; (4) summary and analysis of historical juvenile bull trout downstream migrant trap catches in the Grande Ronde basin; and (5) food habits and feeding behavior of bull trout alone and in sympatry with brook trout.

  11. Bull Trout Life History, Genetics, Habitat Needs, and Limiting Factors in Central and Northeast Oregon. Annual Report 1996.

    Energy Technology Data Exchange (ETDEWEB)

    Bellerud, Blane L.; Gunckel, Stephanie; Hemmingsen, Alan R.; Buchanan, David V.; Howell, Philip J.

    1997-10-01

    This study is part of a multi-year research project studying aspects of bull trout life history, ecology and genetics. This report covers the activities of the project in 1996. Results and analysis are presented in the following five areas: (1) analysis of the genetic structure of Oregon bull trout populations; (2) distribution and habitat use of bull trout and brook trout in streams containing both species; (3) bull trout spawning surveys; (4) summary and analysis of historical juvenile bull trout downstream migrant trap catches in the Grande Ronde basin; and (5) food habits and feeding behavior of bull trout alone and in sympatry with brook trout.

  12. Exotic "Gill Lice" Species (Copepoda: Lernaeopodidae: Salmincola SPP.) Infect Rainbow Trout (Oncorhynchus mykiss) and Brook Trout (Salvelinus fontinalis) in the Southeastern United States.

    Science.gov (United States)

    Ruiz, Carlos F; Rash, Jacob M; Besler, Doug A; Roberts, Jackson R; Warren, Micah B; Arias, Cova R; Bullard, Stephen A

    2017-08-01

    Salmincola californiensis infected 25 of 31 (prevalence 0.8; intensity 2-35 [mean 6.6 ± standard deviation 7.7; n = 25]) rainbow trout, Oncorhynchus mykiss, from a private trout farm connected to the Watauga River, North Carolina. Salmincola edwardsii infected all of 9 (1.0; 2-43 [9.3 ± 13.0; 9]) brook trout, Salvelinus fontinalis, from Big Norton Prong, a tributary of the Little Tennessee River, North Carolina. Both lernaeopodids are well-known salmonid pathogens, but neither is native to, nor has been previously taxonomically confirmed from, the southeastern United States. Herein, we (1) use light and scanning electron microscopy to identify and provide supplemental morphological observations of these lernaeopodids, (2) furnish complementary molecular sequence data from the 28S rDNA (28S), and (3) document the pathological effects of gill infections. We identified and differentiated these lernaeopodids by the second antenna (exopod tip with large [S. californiensis] vs. slender [S. edwardsii] spines; endopod terminal segment with subequal ventral processes shorter than [S. californiensis] vs. longer than or equal to [S. edwardsii] dorsal hook), maxilliped palp (length typically ≤1/3 [S. californiensis] vs. 1/3-1/2 [S. edwardsii] subchela length exclusive of claw), and bulla (sub-circular and concave on manubrium's side [S. californiensis] vs. non-stellate [S. edwardsii]). Analysis of the 28S rDNA sequences confirmed our taxonomic assignments as demonstrated by 100% sequence similarity among the sympatric, morphologically-conspecific isolates. Histopathology revealed focal gill epithelial hyperplasia, obstruction of interlamellar water channels, lamellar fusion, and crypting of gill filaments. High intensity infections by either lernaeopodid are surveillance-worthy because they are potentially pathogenic to trout in the southeastern United States.

  13. Are brown trout replacing or displacing bull trout populations in a changing climate?

    Science.gov (United States)

    Al-Chokhachy, Robert K.; Schmetterling, David A.; Clancy, Chris; Saffel, Pat; Kovach, Ryan; Nyce, Leslie; Liermann, Brad; Fredenberg, Wade A.; Pierce, Ron

    2016-01-01

    Understanding how climate change may facilitate species turnover is an important step in identifying potential conservation strategies. We used data from 33 sites in western Montana to quantify climate associations with native bull trout (Salvelinus confluentus) and non-native brown trout (Salmo trutta) abundance and population growth rates (λ). We estimated λ using exponential growth state space models and delineated study sites based on bull trout use for either Spawning and Rearing (SR) or Foraging, Migrating, and Overwintering (FMO) habitat. Bull trout abundance was negatively associated with mean August stream temperatures within SR habitat (r = -0.75). Brown trout abundance was generally highest at temperatures between 12 and 14°C. We found bull trout λ were generally stable at sites with mean August temperature below 10°C but significantly decreasing, rare, or extirpated at 58% of the sites with temperatures exceeding 10°C. Brown trout λ were highest in SR and sites with temperatures exceeding 12°C. Declining bull trout λs at sites where brown trout were absent suggests brown trout are likely replacing bull trout in a warming climate.

  14. Chromosomal characteristics and distribution of rDNA sequences in the brook trout Salvelinus fontinalis (Mitchill, 1814).

    Science.gov (United States)

    Śliwińska-Jewsiewicka, A; Kuciński, M; Kirtiklis, L; Dobosz, S; Ocalewicz, K; Jankun, Malgorzata

    2015-08-01

    Brook trout Salvelinus fontinalis (Mitchill, 1814) chromosomes have been analyzed using conventional and molecular cytogenetic techniques enabling characteristics and chromosomal location of heterochromatin, nucleolus organizer regions (NORs), ribosomal RNA-encoding genes and telomeric DNA sequences. The C-banding and chromosome digestion with the restriction endonucleases demonstrated distribution and heterogeneity of the heterochromatin in the brook trout genome. DNA sequences of the ribosomal RNA genes, namely the nucleolus-forming 28S (major) and non-nucleolus-forming 5S (minor) rDNAs, were physically mapped using fluorescence in situ hybridization (FISH) and primed in situ labelling. The minor rDNA locus was located on the subtelo-acrocentric chromosome pair No. 9, whereas the major rDNA loci were dispersed on 14 chromosome pairs, showing a considerable inter-individual variation in the number and location. The major and minor rDNA loci were located at different chromosomes. Multichromosomal location (3-6 sites) of the NORs was demonstrated by silver nitrate (AgNO3) impregnation. All Ag-positive i.e. active NORs corresponded to the GC-rich blocks of heterochromatin. FISH with telomeric probe showed the presence of the interstitial telomeric site (ITS) adjacent to the NOR/28S rDNA site on the chromosome 11. This ITS was presumably remnant of the chromosome rearrangement(s) leading to the genomic redistribution of the rDNA sequences. Comparative analysis of the cytogenetic data among several related salmonid species confirmed huge variation in the number and the chromosomal location of rRNA gene clusters in the Salvelinus genome.

  15. Environmental contaminants in brook trout (Salvelinus fontinalis) from Cove Brook and two tributaries of the Sheepscot River

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — The Atlantic salmon (Salmo salar) is a federally-listed endangered species with a Distinct Population Segment (DPS) designated in Maine. In July 2006, thirty-six...

  16. Bull Trout Distribution and Abundance in the Waters on and Bordering the Warm Springs Indian Reservation, 2000 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Brun, Christopher

    2000-01-01

    The range of bull trout (Salvelinus confluentus) in the Deschutes River basin has decreased from historic levels due to many factors including dam construction, habitat degradation, brook trout introduction and eradication efforts. While the bull trout population appears to be stable in the Metolius River-Lake Billy Chinook system they have been largely extirpated from the upper Deschutes River (Buchanan et al. 1997). Little was known about bull trout in the lower Deschutes basin until BPA funded project No.9405400 began during 1998. In this progress report we describe the findings from the third year (2000) of the multi-year study aimed at determining the life history, genetics, habitat needs and limiting factors of bull trout in the lower Deschutes subbasin. Juvenile bull trout and brook trout (Salvelinus fontinalis) relative abundance was assessed in the Warm Springs River and Shitike Creek by night snorkeling. In the Warm Springs R. juvenile bull trout were slightly more numerous than brook trout, however, both were found in low densities. Relative densities of both species declined from 1999 observations. Juvenile bull trout vastly out numbered brook trout in Shitike Cr. Relative densities of juvenile bull trout increased while brook trout abundance was similar to 1999 observations in eight index reaches. The utility of using index reaches to monitor trends in juvenile bull trout and brook trout relative abundance was assessed in the Warm Springs R. for the second year. Mean relative densities of both species, within the index reaches was slightly higher than what was observed in a 2.4 km control reach. Mill Creek was surveyed for the presence of juvenile bull trout. The American Fisheries Society ''Interim protocol for determining bull trout presence'' methodology was field tested. No bull trout were found in the 2 km survey area.

  17. Nature and time course of acclimation to aluminum in juvenile brook trout (Salvelinus fontinalis): II. Gill histology

    Science.gov (United States)

    Mueller, M.E.; Sanchez, D.A.; Bergman, H.L.; McDonald, D.G.; Rhem, R.G.; Wood, C.M.

    1991-01-01

    Gill samples from juvenile brook trout (Salvelinus fontinalis) acclimated to low-level aluminum at pH 5.2 showed severe damage by day 4, with necrosis and fusion of secondary lamellae and hyperplasia and hypertrophy of mucous cells. Over the following 20 d, there was a continual process of repair with proliferation and hypertrophy of mucous cells. Qualitative analysis of gill samples plus physiology and mortality data collected in a companion study indicated progressive development (by day 10 onward) of increasing acclimation to Al. Quantitative analysis of gill samples on day 13 showed that mucous cell volume density had tripled and mucous cell area had doubled in Al-exposed fish compared with control fish. A lamellar fusion index showed evidence of fusion in Al-exposed fish by day 4 with recovery to nearly control levels by day 13. Physiological disturbances appear to be directly related to the histological changes observed in the gill epithelium. At the cellular level, changes in either mucous cell production and secretion or changes in mucus chemistry contribute, in part, to acclimation to Al.

  18. An assessment of the development and survival of wild rainbow trout (Oncorhynchus mykiss) and brook trout (Salvelinus fontinalis) exposed to elevated selenium in an area of active coal mining

    Energy Technology Data Exchange (ETDEWEB)

    Holm, J.; Palace, V.P.; Wautier, K.; Evans, R.E.; Baron, C.L.; Podemski, C.; Siwik, P.; Sterling, G.

    2003-07-01

    Elevated levels of selenium (Se) have recently been detected downstream from uranium and coal mining activity in Canada. While Se is an essential dietary element, elevated concentrations can lead to decreased growth, reproductive impairment and increased mortality. A hallmark of Se toxicity is the appearance of teratogenic deformities in the progeny of exposed females that result from the deposition of Se to their eggs. Teratogenesis is an effective indicator of Se toxicity in fish communities. This study compares three methods of evaluating deformities in the larvae of rainbow trout and brook trout inhabiting seleniferous waters downstream from active coal mining activity in the Northern East Slopes Region of Alberta, Canada. Gametes were stripped from adult fish and transported to the laboratory where they were fertilized and reared to the swim-up stage. Fry were assessed for deformities using frequency analysis, a graduated severity index (GS), and morphometric analysis. Adults show no signs of Se toxicity but accumulated higher concentration of Se in muscle and eggs compared to fish from the reference sites. There were increased incidences of edema and spinal deformities in rainbow trout fry and increased frequency of craniofacial deformities in brook trout fry from the seleniferous site compared to those from the reference sites. Of the three methods used to assess deformities in larval fish, frequency analysis was found to be the most practical, rapid, and produced the most meaningful results.

  19. Level II scour analysis for Bridge 19 (SHEFTH00440019) on Town Highway 44, crossing Trout Brook, Sheffield, Vermont

    Science.gov (United States)

    Wild, Emily C.; Medalie, Laura

    1997-01-01

    This report provides the results of a detailed Level II analysis of scour potential at structure SHEFTH00440019 on Town Highway 44 crossing Trout Brook, Sheffield, Vermont (figures 1–8). A Level II study is a basic engineering analysis of the site, including a quantitative analysis of stream stability and scour (U.S. Department of Transportation, 1993). Results of a Level I scour investigation also are included in Appendix E of this report. A Level I investigation provides a qualitative geomorphic characterization of the study site. Information on the bridge, gleaned from Vermont Agency of Transportation (VTAOT) files, was compiled prior to conducting Level I and Level II analyses and is found in Appendix D. The site is in the White Mountain section of the New England physiographic province in northeastern Vermont. The 3.0-mi2 drainage area is in a predominantly rural and forested basin. In the vicinity of the study site, the surface cover is grass on the upstream and downstream right overbanks, while the immediate banks have dense woody vegetation. The surface cover of the upstream and downstream left overbanks is shrub and brushland. In the study area, Trout Brook has an incised, sinuous channel with a slope of approximately 0.03 ft/ft, an average channel top width of 45 ft and an average bank height of 6 ft. The channel bed material ranges from sand to boulder with a median grain size (D50) of 116 mm (0.381 ft). The geomorphic assessment at the time of the Level I and Level II site visit on July 31, 1995, indicated that the reach was stable. The Town Highway 44 crossing of Trout Brook is a 24-ft-long, one-lane bridge consisting of a 22-foot steel-stringer span (Vermont Agency of Transportation, written communication, March 28, 1994). The opening length of the structure parallel to the bridge face is 19.8 ft. The bridge is supported by vertical, concrete abutments with wingwalls. The channel is skewed approximately 10 degrees to the opening while the opening

  20. Bull Trout Population Assessment in the Columbia River Gorge : Annual Report 2000.

    Energy Technology Data Exchange (ETDEWEB)

    Byrne, Jim; McPeak, Ron

    2001-02-01

    We summarized existing knowledge regarding the known distribution of bull trout (Salvelinus confluentus) across four sub-basins in the Columbia River Gorge in Washington. The Wind River, Little White Salmon River, White Salmon River, and the Klickitat River sub-basins were analyzed. Cold water is essential to the survival, spawning, and rearing of bull trout. We analyzed existing temperature data, installed Onset temperature loggers in the areas of the four sub-basins where data was not available, and determined that mean daily water temperatures were <15 C and appropriate for spawning and rearing of bull trout. We snorkel surveyed more than 74 km (46.25 mi.) of rivers and streams in the four sub-basins (13.8 km at night and 60.2 km during the day) and found that night snorkeling was superior to day snorkeling for locating bull trout. Surveys incorporated the Draft Interim Protocol for Determining Bull Trout Presence (Peterson et al. In Press). However, due to access and safety issues, we were unable to randomly select sample sites nor use block nets as recommended. Additionally, we also implemented the Bull Trout/Dolly Varden sampling methodology described in Bonar et al. (1997). No bull trout were found in the Wind River, Little White Salmon, or White Salmon River sub-basins. We found bull trout in the West Fork Klickitat drainage of the Klickitat River Sub-basin. Bull trout averaged 6.7 fish/100m{sup 2} in Trappers Creek, 2.6 fish/100m{sup 2} on Clearwater Creek, and 0.4 fish/100m{sup 2} in Little Muddy Creek. Bull trout was the only species of salmonid encountered in Trappers Creek and dominated in Clearwater Creek. Little Muddy Creek was the only creek where bull trout and introduced brook trout occurred together. We found bull trout only at night and typically in low flow regimes. A single fish, believed to be a bull trout x brook trout hybrid, was observed in the Little Muddy Creek. Additional surveys are needed in the West Fork Klickitat and mainstem

  1. The effects of low-speed swimming following exhaustive exercise on metabolic recovery and swimming performance in brook trout (Salvelinus fontinalis).

    Science.gov (United States)

    Kieffer, James D; Kassie, Roshini S; Taylor, Susan G

    2011-01-01

    Experiments were conducted to determine whether low-speed swimming during recovery from exhaustive exercise improved both metabolic recovery and performance during a swimming challenge. For these experiments, brook trout were allowed to recover from exhaustive exercise for 2 h while swimming at 0, 0.5, 1.0, or 1.5 body length (BL) s(-1) or allowed to recover from exhaustive exercise for 1, 2, or 3 h while swimming at 1.0 BL s(-1). At the appropriate interval, either (i) muscle and blood samples were removed from the fish or (ii) fish were assessed for performance (i.e., fatigue time) during a fixed-interval swimming test. Low-speed swimming during recovery from exhaustive exercise resulted in significantly longer fatigue times compared with fish recovering in still water (i.e., 0 BL s(-1)). However, swimming during recovery did not expedite recovery of muscle lactate or blood variables (e.g., lactate, osmolarity, glucose). These observations suggest that metabolic recovery and subsequent swimming performance may not be directly linked and that other factors play a role in swimming recovery in brook trout.

  2. Structured decision making for conservation of bull trout (Salvelinus confluentus) in Long Creek, Klamath River Basin, south-central Oregon

    Science.gov (United States)

    Benjamin, Joseph R.; McDonnell, Kevin; Dunham, Jason B.; Brignon, William R.; Peterson, James T.

    2017-06-21

    With the decline of bull trout (Salvelinus confluentus), managers face multiple, and sometimes contradictory, management alternatives for species recovery. Moreover, effective decision-making involves all stakeholders influenced by the decisions (such as Tribal, State, Federal, private, and non-governmental organizations) because they represent diverse objectives, jurisdictions, policy mandates, and opinions of the best management strategy. The process of structured decision making is explicitly designed to address these elements of the decision making process. Here we report on an application of structured decision making to a population of bull trout believed threatened by high densities of nonnative brook trout (S. fontinalis) and habitat fragmentation in Long Creek, a tributary to the Sycan River in the Klamath River Basin, south-central Oregon. This involved engaging stakeholders to identify (1) their fundamental objectives for the conservation of bull trout, (2) feasible management alternatives to achieve their objectives, and (3) biological information and assumptions to incorporate in a decision model. Model simulations suggested an overarching theme among the top decision alternatives, which was a need to simultaneously control brook trout and ensure that the migratory tactic of bull trout can be expressed. More specifically, the optimal management decision, based on the estimated adult abundance at year 10, was to combine the eradication of brook trout from Long Creek with improvement of downstream conditions (for example, connectivity or habitat conditions). Other top decisions included these actions independently, as well as electrofishing removal of brook trout. In contrast, translocating bull trout to a different stream or installing a barrier to prevent upstream spread of brook trout had minimal or negative effects on the bull trout population. Moreover, sensitivity analyses suggested that these actions were consistently identified as optimal across

  3. Adaptive Management of Bull Trout Populations in the Lemhi Basin

    Science.gov (United States)

    Peterson, James T.; Tyre, Andrew J.; Converse, Sarah J.; Bogich, Tiffany L.; Miller, Damien; Post van der Burg, Max; Thomas, Carmen; Thompson, Ralph J.; Wood, Jeri; Brewer, Donna; Runge, Michael C.

    2011-01-01

    The bull trout Salvelinus confluentus, a stream-living salmonid distributed in drainages of the northwestern United States, is listed as threatened under the Endangered Species Act because of rangewide declines. One proposed recovery action is the reconnection of tributaries in the Lemhi Basin. Past water use policies in this core area disconnected headwater spawning sites from downstream habitat and have led to the loss of migratory life history forms. We developed an adaptive management framework to analyze which types of streams should be prioritized for reconnection under a proposed Habitat Conservation Plan. We developed a Stochastic Dynamic Program that identified optimal policies over time under four different assumptions about the nature of the migratory behavior and the effects of brook trout Salvelinus fontinalis on subpopulations of bull trout. In general, given the current state of the system and the uncertainties about the dynamics, the optimal policy would be to connect streams that are currently occupied by bull trout. We also estimated the value of information as the difference between absolute certainty about which of our four assumptions were correct, and a model averaged optimization assuming no knowledge. Overall there is little to be gained by learning about the dynamics of the system in its current state, although in other parts of the state space reducing uncertainties about the system would be very valuable. We also conducted a sensitivity analysis; the optimal decision at the current state does not change even when parameter values are changed up to 75% of the baseline values. Overall, the exercise demonstrates that it is possible to apply adaptive management principles to threatened and endangered species, but logistical and data availability constraints make detailed analyses difficult.

  4. Salamander populations and biomass in the Hubbard Brook Experimental Forest, New Hampshire

    Energy Technology Data Exchange (ETDEWEB)

    Burton, T.M.; Likens, G.E.

    1975-01-01

    There were about 2950 salamanders per ha (1770 g/ha wet wt) in the Hubbard Brook Experimental Forest in New Hampshire. The terrestrial species, Plethodon cinereus, accounted for about 93.5% of the total biomass while the streamside species, Desmognathus fuscus, Eurycea bislineata and Gyrinophilus porphyriticus, accounted for the remaining 6.5%. Notophthalmus viridescens was present, but was rare and insignificant in the biomass calculations. The population size of salamanders at Hubbard Brook appears to be stable. The biomass of salamanders is about twice that of birds during the bird's peak (breeding) season and is about equal to the biomass of small mammals.

  5. Reliability of the Suchey-Brooks method for a French contemporary population.

    Science.gov (United States)

    Savall, Frédéric; Rérolle, Camille; Hérin, Fabrice; Dédouit, Fabrice; Rougé, Daniel; Telmon, Norbert; Saint-Martin, Pauline

    2016-09-01

    The Suchey-Brooks method is commonly used for pubic symphyseal aging in forensic cases. However, inter-population variability is a problem affected by several factors such as geographical location and secular trends. The aim of our study was to test the reliability of the Suchey-Brooks method on a virtual sample of contemporary French males. We carried out a retrospective study of 680 pubic symphysis from adult males undergoing clinical Multislice Computed Tomography in two hospitals between January 2013 and July 2014 (Toulouse and Tours, France). The reliability of the Suchey-Brooks method was tested by the calculation of inaccuracy and bias between real and estimated ages, and the mean age for each stage and the mean stage for each 10-years age interval were compared. The degree of inaccuracy and bias increased with age and inaccuracy exceeded 20 years for individuals over 65 years of age. The results are consistent with an overestimation of the real age for stages I and II and an underestimation of the real age for stages IV, V and VI. Furthermore, the mean stages of the reference sample were significantly lower for the 14-25 age group and significantly higher for individuals over 35 years old. Age estimation is potentially limited by differential inter-population error rates between geographical locations. Furthermore, the effects of secular trends are also supported by research in European countries showing a reduction in the age of attainment of indicators of biological maturity during the past few decades. The results suggest that the Suchey-Brooks method should be used with caution in France. Our study supports previous findings and in the future, the Suchey-Brooks method could benefit from re-evaluation of the aging standards by the establishment of new virtual reference samples.

  6. Lake trout demographics in relation to burbot and coregonine populations in the Algonquin Highlands, Ontario

    Science.gov (United States)

    Carl, L.M.

    2008-01-01

    The objective of the study was to test the hypothesis that lake trout populations change in relation to cisco, lake whitefish, round whitefish and burbot populations in lakes in the Algonquin Highlands region of Ontario. Lake trout population change is greatest where cisco and lake whitefish are present. Lake trout populations in lakes without either coregonine tend to have small adults and many juveniles. Where cisco or lake whitefish are present, adult lake trout are large, juvenile abundance is low, and the stock-recruit relationship appears to be uncoupled likely due to a larval bottleneck. Lake trout populations in these lakes may be sensitive to overfishing and recruitment failure. Lake trout populations do not appear to change in relation to round whitefish. There appears to be an indirect positive change on juvenile lake trout abundance through reductions in the density of benthic coregonines in the presence of large, hypolimnetic burbot. ?? 2007 Springer Science+Business Media B.V.

  7. Genetic diversity in Chilean populations of rainbow trout, Oncorhynchus mykiss

    Directory of Open Access Journals (Sweden)

    Claudia B Cárcamo

    2015-03-01

    Full Text Available The rainbow trout Oncorhynchus mykiss, was first introduced in Chile between 1905 and 1920 and is currently widely distributed in Chile from Antofagasta (23°S to Patagonia (55°S. The broad range of the geographic and climatic distributions of this species in Chile offers a unique opportunity to study the effect of naturalization of an introduced species on its genetic variability. It is of particular importance to observe the genetic variability of populations in the northern range of this species distribution, in a transition zone where a Mediterranean-type climate changes to an arid climate. The present study analyzed allozymic variability and distribution within and between populations of O. mykiss from the river basins of Elqui and Limari rivers, and six culture strains, using starch-gel protein electrophoresis. Populations were found to be in Hardy-Weinberg equilibrium and the average values of He (0.045, polymorphism (13.9% and allele per locus (1.19 are similar to rainbow trout in its native distributional range. About 77.8% of the genetic variability was within population, similar to the variability reported for wild populations in the northern hemisphere. However, a marked genetic differentiation between wild populations was also found. This is likely to be the consequence of initial founder effects followed by subsequent introgression of resident populations caused by reseeding with trout of different origins in both basins.

  8. Introgression and susceptibility to disease in a wild population of rainbow trout

    Science.gov (United States)

    Currens, K.P.; Hemmingsen, A.R.; French, R.A.; Buchanan, D.V.; Schreck, C.B.; Li, H.W.

    1997-01-01

    We examined susceptibility of wild rainbow trout Oncorhynchus mykiss from the Metolius River, a tributary of the Deschutes River, Oregon, to genetic introgression and ceratomyxosis as a result of stocking nonnative hatchery rainbow trout. Ceratomyxa shasta, an enzootic myxosporean parasite that can be lethal to nonnative hatchery rainbow trout, might have been limiting the interbreeding of hatchery and wild rainbow trout in the river. However, rainbow trout from the Metolius River had allozyme frequencies intermediate between those of wild and hatchery fish at LDH-B2* and sSOD-1*, two diagnostic genetic loci that allow the inland subspecies of rainbow trout to be distinguished from hatchery strains of coastal origin. They also had notable frequencies of ADA-1*85, an allele documented in hatchery rainbow trout but rarely seen in wild populations. We also found that rainbow trout in the Metolius River averaged 138.9 scales in the lateral series, intermediate between the counts for 9 coastal or nonnative hatchery populations, which always had fewer than 140 scales, and 10 inland populations, which always had more than 140 scales. Disease challenges revealed that rainbow trout from the Metolius River had much greater susceptibility to C. shasta than rainbow trout from the Deschutes River, which have genetic resistance to the lethal disease. Based on these data, we concluded that introgression with nonnative hatchery rainbow trout has reduced the abilities of wild rainbow trout in the Metolius River to survive when conditions for ceratomyxosis infection occur.

  9. Developing recreational harvest regulations for an unexploited lake trout population

    Science.gov (United States)

    Lenker, Melissa A; Weidel, Brian C.; Jensen, Olaf P.; Solomon, Christopher T.

    2016-01-01

    Developing fishing regulations for previously unexploited populations presents numerous challenges, many of which stem from a scarcity of baseline information about abundance, population productivity, and expected angling pressure. We used simulation models to test the effect of six management strategies (catch and release; trophy, minimum, and maximum length limits; and protected and exploited slot length limits) on an unexploited population of Lake Trout Salvelinus namaycush in Follensby Pond, a 393-ha lake located in New York State’s Adirondack Park. We combined field and literature data and mark–recapture abundance estimates to parameterize an age-structured population model and used the model to assess the effects of each management strategy on abundance, catch per unit effort (CPUE), and harvest over a range of angler effort (0–2,000 angler-days/year). Lake Trout density (3.5 fish/ha for fish ≥ age 13, the estimated age at maturity) was similar to densities observed in other unexploited systems, but growth rate was relatively slow. Maximum harvest occurred at levels of effort ≤ 1,000 angler-days/year in all the scenarios considered. Regulations that permitted harvest of large postmaturation fish, such as New York’s standard Lake Trout minimum size limit or a trophy size limit, resulted in low harvest and high angler CPUE. Regulations that permitted harvest of small and sometimes immature fish, such as a protected slot or maximum size limit, allowed high harvest but resulted in low angler CPUE and produced rapid declines in harvest with increases in effort beyond the effort consistent with maximum yield. Management agencies can use these results to match regulations to management goals and to assess the risks of different management options for unexploited Lake Trout populations and other fish species with similar life history traits.

  10. Analysis of trade-offs between threats of invasion by nonnative brook trout (Salvelinus fontinalis) and intentional isolation for native westslope cutthroat trout (Oncorhynchus clarkii lewisi)

    Science.gov (United States)

    Douglas P. Peterson; Bruce E. Reiman; Jason B. Dunham; Kurt D. Fausch; Michael K. Young

    2008-01-01

    Native salmonid fishes often face simultaneous threats from habitat fragmentation and invasion by nonnative trout species. Unfortunately, management actions to address one may create or exacerbate the other. A consistent decision process would include a systematic analysis of when and where intentional use or removal of barriers is the most appropriate action. We...

  11. Demographic characteristics of an adfluvial bull trout population in Lake Pend Oreille, Idaho

    Science.gov (United States)

    McCubbins, Jonathan L; Hansen, Michael J.; DosSantos, Joseph M; Dux, Andrew M

    2016-01-01

    Introductions of nonnative species, habitat loss, and stream fragmentation have caused the Bull Trout Salvelinus confluentus to decline throughout much of its native distribution. Consequently, in June 1998, the Bull Trout was listed under the U.S. Endangered Species Act as threatened. The Bull Trout has existed in Lake Pend Oreille and its surrounding tributaries since the last ice age, and the lake once supported a world-renowned Bull Trout fishery. To quantify the current status of the Bull Trout population in Lake Pend Oreille, Idaho, we compared the mean age, growth, maturity, and abundance with reports in a study conducted one decade earlier. Abundance was estimated by mark–recapture for Bull Trout caught in trap nets and gill nets set in Lake Pend Oreille during ongoing suppression netting of Lake Trout S. namaycushin 2007–2008. Bull Trout sampled in 2006–2008 were used to estimate age structure, survival, growth, and maturity. Estimated Bull Trout abundance was similar to that estimated one decade earlier in Lake Pend Oreille. Bull Trout residing in Lake Pend Oreille between 2006 and 2008 were between ages 4 and 14 years; their growth was fastest between ages 1 and 2 and slowed thereafter. Male and female Bull Trout matured at a similar age, but females grew faster than males, thereby maturing at a larger size. Our findings suggest that management has effectively addressed current threats to increase the likelihood of long-term persistence of the Bull Trout population in Lake Pend Oreille.

  12. Behavioural and physiological responses of brook trout Salvelinus fontinalis to midwinter flow reduction in a small ice-free mountain stream.

    Science.gov (United States)

    Krimmer, A N; Paul, A J; Hontela, A; Rasmussen, J B

    2011-09-01

    This study presents an experimental analysis of the effects of midwinter flow reduction (50-75%, reduction in discharge in 4 h daily pulses) on the physical habitat and on behaviour and physiology of overwintering brook trout Salvelinus fontinalis in a small mountain stream. Flow reduction did not result in significant lowering of temperature or formation of surface or subsurface ice. The main findings were (1) daily movement by S. fontinalis increased (c. 2·5-fold) during flow reduction, but was limited to small-scale relocations (banks were the preferred habitat and availability of these habitats was reduced during flow reduction. (3) Although both experimental and reference fish did lose mass and condition during the experiment, no effects of flow reduction on stress indicators (blood cortisol or glucose) or bioenergetics (total body fat, water content or mass loss) were detected, probably because access to the preferred type of cover remained available. Like other salmonids, S. fontinalis moves little and seeks physical cover during winter. Unlike many of the more studied salmonids, however, this species overwinters successfully in small groundwater-rich streams that often remain ice-free, and this study identifies undercut banks as the critical winter habitat rather than substratum cover.

  13. Perturbation in protein expression of the sterile salmonid hybrids between female brook trout Salvelinus fontinalis and male masu salmon Oncorhynchus masou during early spermatogenesis.

    Science.gov (United States)

    Zheng, Liang; Senda, Yoshie; Abe, Syuiti

    2013-05-01

    Most males and females of intergeneric hybrid (BM) between female brook trout (Bt) Salvelinus fontinalis and male masu salmon (Ms) Oncorhynchus masou had undeveloped gonads, with abnormal germ cell development shown by histological examination. To understand the cause of this hybrid sterility, expression profiles of testicular proteins in the BM and parental species were examined with 2-DE coupled with MALDI-TOF/TOF MS. Compared with the parental species, more than 60% of differentially expressed protein spots were down-regulated in BM. A total of 16 up-regulated and 48 down-regulated proteins were identified in BM. Up-regulated were transferrin and other somatic cell-predominant proteins, whereas down-regulated were some germ cell-specific proteins such as DEAD box RNA helicase Vasa. Other pronouncedly down-regulated proteins included tubulins and heat shock proteins that are supposed to have roles in spermatogenesis. The present findings suggest direct association of the observed perturbation in protein expression with the failure of spermatogenesis and the sterility in the examined salmonid hybrids.

  14. Incidence of pigmented skin tumors in a population of wild Montseny brook newt (Calotriton arnoldi).

    Science.gov (United States)

    Martínez-Silvestre, Albert; Amat, Fèlix; Bargalló, Ferran; Carranza, Salvador

    2011-04-01

    We report the presence of pigmented skin tumors in three populations of the endangered amphibian Montseny brook newt, Calotriton arnoldi, one of the European amphibian species with the smallest distribution range (40 km(2) in the Montseny Natural Park, Catalonia, Spain). Examination of one of the tumors by light microscopy was consistent with chromatophoroma and was most suggestive of a melanophoroma. Tumors were not found in juveniles. In adults, only two of three populations were affected. The proportions of males and females affected were not significantly different, but there was a positive correlation between body size and presence of tumors in both sexes. The etiology of chromatophoromas remains unknown but, in our study, they do not appear to have been caused by water quality or Ultraviolet B.

  15. Genetic structure and demographic history of brown trout ( Salmo trutta ) populations from the southern Balkans

    DEFF Research Database (Denmark)

    Apostolidis, A.P.; Madeira, M.J.; Hansen, Michael Møller

    2008-01-01

    1. The present study was designed to characterize the genetic structure of brown trout (Salmo trutta) populations from the southern Balkans and to assess the spread of non-native strains and their introgression into native trout gene pools. We analysed polymorphism at nine microsatellite loci in ...

  16. Founder effects and genetic population structure of brown trout (Salmo trutta) in a Danish river system

    DEFF Research Database (Denmark)

    Hansen, Michael Møller; Mensberg, Karen-Lise Dons

    1996-01-01

    The influence of founder effects on the genetic population structure of brown trout (Salmo trutta) was studied in a small Danish river system. Samples of trout from seven locations were analysed by allozyme electrophoresis and mitochondrial DNA restriction fragment length polymorphism analysis...

  17. Influence of small hydropower plants on brown trout (Salmo trutta L. population in Mislinja River

    Directory of Open Access Journals (Sweden)

    Blaž Cokan

    2013-12-01

    Full Text Available The brown trout (Salmo trutta L. in the Mislinja River has been endangered for years because of small hydroelectric power plants. To find out how they are affecting the population of the brown trout in the Mislinja River, we conducted a sampling of the brown trout, using a generating set. We measured the length and weight of all caught specimens and analysed the obtained data. The results are presented in this paper, e.g., biomass, estimations of abundance, average weight, average length and number of captured brown trout. We discovered that the population of the brown trout has decreased in all the sections where water has been taken away for small hydroelectric power plants.

  18. Estimating the long-term effects of stocking domesticated trout into wild brown trout ( Salmo trutta ) populations : an approach using microsatellite DNA analysis of historical and contemporary samples

    DEFF Research Database (Denmark)

    Hansen, Michael Møller

    2002-01-01

    . The study was based on analysis of two historical samples (194556), represented by old scale collections, and seven contemporary samples (1986-2000). In one population historical and contemporary samples were remarkably genetically similar despite more than a decade of intense stocking. Estimation...... equal survival and reproductive performance of wild and domesticated trout. This demonstrates poor performance and low fitness of domesticated trout in the wild. In another population there was a strong genetic contribution from domesticated trout (between 57% and 88% in different samples), both...... in samples from a broodstock thought to represent the indigenous population and in a sample of wild spawners. Survival of domesticated trout and admixture with indigenous fish in the broodstock and subsequent stocking into the river, combined with a low population size of native trout relative to the number...

  19. Potential population and assemblage influences of non-native trout on native nongame fish in Nebraska headwater streams

    Science.gov (United States)

    Turek, Kelly C.; Pegg, Mark A.; Pope, Kevin L.; Schainost, Steve

    2014-01-01

    Non-native trout are currently stocked to support recreational fisheries in headwater streams throughout Nebraska. The influence of non-native trout introductions on native fish populations and their role in structuring fish assemblages in these systems is unknown. The objectives of this study were to determine (i) if the size structure or relative abundance of native fish differs in the presence and absence of non-native trout, (ii) if native fish-assemblage structure differs in the presence and absence of non-native trout and (iii) if native fish-assemblage structure differs across a gradient in abundances of non-native trout. Longnose dace Rhinichthys cataractae were larger in the presence of brown trout Salmo trutta and smaller in the presence of rainbow trout Oncorhynchus mykiss compared to sites without trout. There was also a greater proportion of larger white suckers Catostomus commersonii in the presence of brown trout. Creek chub Semotilus atromaculatus and fathead minnow Pimephales promelas size structures were similar in the presence and absence of trout. Relative abundances of longnose dace, white sucker, creek chub and fathead minnow were similar in the presence and absence of trout, but there was greater distinction in native fish-assemblage structure between sites with trout compared to sites without trout as trout abundances increased. These results suggest increased risk to native fish assemblages in sites with high abundances of trout. However, more research is needed to determine the role of non-native trout in structuring native fish assemblages in streams, and the mechanisms through which introduced trout may influence native fish populations.

  20. Seasonal temperature and precipitation regulate brook trout young-of-the-year abundance and population dynamics

    Science.gov (United States)

    Kanno, Yoichiro; Pregler, Kasey C.; Hitt, Nathaniel P.; Letcher, Benjamin H.; Hocking, Daniel; Wofford, John E.B.

    2015-01-01

    Abundance of the young-of-the-year (YOY) fish can vary greatly among years and it may be driven by several key biological processes (i.e. adult spawning, egg survival and fry survival) that span several months. However, the relative influence of seasonal weather patterns on YOY abundance is poorly understood.

  1. Founder effects and genetic population structure of brown trout (Salmo trutta) in a Danish river system

    DEFF Research Database (Denmark)

    Hansen, Michael Møller; Mensberg, Karen-Lise Dons

    1996-01-01

    The influence of founder effects on the genetic population structure of brown trout (Salmo trutta) was studied in a small Danish river system. Samples of trout from seven locations were analysed by allozyme electrophoresis and mitochondrial DNA restriction fragment length polymorphism analysis....... For comparison, allozyme data from other Danish trout populations and mtDNA data from two hatchery strains were included. Genetic differentiation among populations was found to be small but significant. Pairwise tests for homogeneity of allele and haplotype frequencies between samples showed that significance...... was predominantly due to a single population. In two of the locations studied, extinction-recolonization events had taken place. In one of the populations, founding had not resulted in divergence, while the other founded population was the one that had diverged significantly from the remaining populations. Computer...

  2. Population structure of Phalloceros caudimaculatus (Hensel, 1868 (Cyprinodontiformes, Poeciliidae collected in a brook in Guarapuava, PR

    Directory of Open Access Journals (Sweden)

    Luciano Lazzarini Wolff

    2007-05-01

    Full Text Available The population structure of Phalloceros caudimaculatus was studied in a brook (sites A and B existing in the CEDETEG - Guarapuava/PR. Fourteen length classes of 3 mm amplitude were defined for P. caudimaculatus. The widest length amplitude and the average and maximum sizes were observed in females. Females were significantly more predominant in the whole sample and more frequent in all length classes. The sexual proportion data, showed that the number of females was superior to that of males throughout most of the year. Young occurrence peaks were registered in November and March. Pregnant females were present from March to April, from July to August and in January, characterizing the reproductive season. At sampling site A, a higher occurrence of pregnant females and young was observed.A estrutura populacional de Phalloceros caudimaculatus foi estudada em um riacho (pontos A e B existente no CEDETEG - Guarapuava/PR. Para P. caudimaculatus foram encontradas 14 classes de comprimento com amplitude de 3,0mm. A maior amplitude de comprimento e os maiores tamanhos médios e máximos foram observados nas fêmeas. As fêmeas foram significativamente predominantes na amostra total e mais abundantes em todas as classes de comprimento. Pela proporção sexual pode-se detectar que o número de fêmeas é superior ao de machos a maior parte do ano. Os picos de ocorrência de jovens foram registrados nos meses de novembro e março. As fêmeas grávidas estiveram presentes nos bimestres de março-abril, julho-agosto e no mês de janeiro, caracterizando a época reprodutiva. No ponto de coleta A foi observado uma maior ocorrência de fêmeas grávidas e de jovens.

  3. Local variability mediates vulnerability of trout populations to land use and climate change

    Science.gov (United States)

    Penaluna, Brooke E.; Dunham, Jason B.; Railsback, Steve F.; Arismendi, Ivan; Johnson, Sherri L.; Bilby, Robert E; Safeeq, Mohammad; Skaugset, Arne E.

    2015-01-01

    Land use and climate change occur simultaneously around the globe. Fully understanding their separate and combined effects requires a mechanistic understanding at the local scale where their effects are ultimately realized. Here we applied an individual-based model of fish population dynamics to evaluate the role of local stream variability in modifying responses of Coastal Cutthroat Trout (Oncorhynchus clarkii clarkii) to scenarios simulating identical changes in temperature and stream flows linked to forest harvest, climate change, and their combined effects over six decades. We parameterized the model for four neighboring streams located in a forested headwater catchment in northwestern Oregon, USA with multi-year, daily measurements of stream temperature, flow, and turbidity (2007–2011), and field measurements of both instream habitat structure and three years of annual trout population estimates. Model simulations revealed that variability in habitat conditions among streams (depth, available habitat) mediated the effects of forest harvest and climate change. Net effects for most simulated trout responses were different from or less than the sum of their separate scenarios. In some cases, forest harvest countered the effects of climate change through increased summer flow. Climate change most strongly influenced trout (earlier fry emergence, reductions in biomass of older trout, increased biomass of young-of-year), but these changes did not consistently translate into reductions in biomass over time. Forest harvest, in contrast, produced fewer and less consistent responses in trout. Earlier fry emergence driven by climate change was the most consistent simulated response, whereas survival, growth, and biomass were inconsistent. Overall our findings indicate a host of local processes can strongly influence how populations respond to broad scale effects of land use and climate change.

  4. Local Variability Mediates Vulnerability of Trout Populations to Land Use and Climate Change.

    Science.gov (United States)

    Penaluna, Brooke E; Dunham, Jason B; Railsback, Steve F; Arismendi, Ivan; Johnson, Sherri L; Bilby, Robert E; Safeeq, Mohammad; Skaugset, Arne E

    2015-01-01

    Land use and climate change occur simultaneously around the globe. Fully understanding their separate and combined effects requires a mechanistic understanding at the local scale where their effects are ultimately realized. Here we applied an individual-based model of fish population dynamics to evaluate the role of local stream variability in modifying responses of Coastal Cutthroat Trout (Oncorhynchus clarkii clarkii) to scenarios simulating identical changes in temperature and stream flows linked to forest harvest, climate change, and their combined effects over six decades. We parameterized the model for four neighboring streams located in a forested headwater catchment in northwestern Oregon, USA with multi-year, daily measurements of stream temperature, flow, and turbidity (2007-2011), and field measurements of both instream habitat structure and three years of annual trout population estimates. Model simulations revealed that variability in habitat conditions among streams (depth, available habitat) mediated the effects of forest harvest and climate change. Net effects for most simulated trout responses were different from or less than the sum of their separate scenarios. In some cases, forest harvest countered the effects of climate change through increased summer flow. Climate change most strongly influenced trout (earlier fry emergence, reductions in biomass of older trout, increased biomass of young-of-year), but these changes did not consistently translate into reductions in biomass over time. Forest harvest, in contrast, produced fewer and less consistent responses in trout. Earlier fry emergence driven by climate change was the most consistent simulated response, whereas survival, growth, and biomass were inconsistent. Overall our findings indicate a host of local processes can strongly influence how populations respond to broad scale effects of land use and climate change.

  5. Local Variability Mediates Vulnerability of Trout Populations to Land Use and Climate Change.

    Directory of Open Access Journals (Sweden)

    Brooke E Penaluna

    Full Text Available Land use and climate change occur simultaneously around the globe. Fully understanding their separate and combined effects requires a mechanistic understanding at the local scale where their effects are ultimately realized. Here we applied an individual-based model of fish population dynamics to evaluate the role of local stream variability in modifying responses of Coastal Cutthroat Trout (Oncorhynchus clarkii clarkii to scenarios simulating identical changes in temperature and stream flows linked to forest harvest, climate change, and their combined effects over six decades. We parameterized the model for four neighboring streams located in a forested headwater catchment in northwestern Oregon, USA with multi-year, daily measurements of stream temperature, flow, and turbidity (2007-2011, and field measurements of both instream habitat structure and three years of annual trout population estimates. Model simulations revealed that variability in habitat conditions among streams (depth, available habitat mediated the effects of forest harvest and climate change. Net effects for most simulated trout responses were different from or less than the sum of their separate scenarios. In some cases, forest harvest countered the effects of climate change through increased summer flow. Climate change most strongly influenced trout (earlier fry emergence, reductions in biomass of older trout, increased biomass of young-of-year, but these changes did not consistently translate into reductions in biomass over time. Forest harvest, in contrast, produced fewer and less consistent responses in trout. Earlier fry emergence driven by climate change was the most consistent simulated response, whereas survival, growth, and biomass were inconsistent. Overall our findings indicate a host of local processes can strongly influence how populations respond to broad scale effects of land use and climate change.

  6. Population and family structure of brown trout, Salmo trutta, in a Mediterranean stream

    DEFF Research Database (Denmark)

    Vera, Manuel; Sanz, Nuria; Hansen, Michael Møller

    2010-01-01

    The physical arrangement of closely related individuals is expected to significantly influence the pattern of population genetic structure. For example, if related individuals are non-randomly distributed and included in samples, this may lead to exaggerated conclusions about genetic differentiat......The physical arrangement of closely related individuals is expected to significantly influence the pattern of population genetic structure. For example, if related individuals are non-randomly distributed and included in samples, this may lead to exaggerated conclusions about genetic...... differentiation. In the present study, we compared population structure v. family relationships of brown trout (Salmo trutta L.) along a Mediterranean stream (Pyrenees) by using eight microsatellite loci. Results showed low levels of genetic (FST) differentiation between collections in a 6.5-km transect along...... with limited dispersal of younger brown trout from spawning redds. Family relationships provided evidence, however, for movement of adult trout over distances of a few kilometres that probably contributed to the low observed differentiation. Dispersal of adult Mediterranean trout contrasts with the clustering...

  7. Population and family structure of brown trout, Salmo trutta, in a Mediterranean stream

    DEFF Research Database (Denmark)

    Vera, Manuel; Sanz, Nuria; Hansen, Michael Møller

    2010-01-01

    The physical arrangement of closely related individuals is expected to significantly influence the pattern of population genetic structure. For example, if related individuals are non-randomly distributed and included in samples, this may lead to exaggerated conclusions about genetic differentiat......The physical arrangement of closely related individuals is expected to significantly influence the pattern of population genetic structure. For example, if related individuals are non-randomly distributed and included in samples, this may lead to exaggerated conclusions about genetic...... differentiation. In the present study, we compared population structure v. family relationships of brown trout (Salmo trutta L.) along a Mediterranean stream (Pyrenees) by using eight microsatellite loci. Results showed low levels of genetic (FST) differentiation between collections in a 6.5-km transect along...... with limited dispersal of younger brown trout from spawning redds. Family relationships provided evidence, however, for movement of adult trout over distances of a few kilometres that probably contributed to the low observed differentiation. Dispersal of adult Mediterranean trout contrasts with the clustering...

  8. Movement patterns and spatial segregation of two populations of lake trout Salvelinus namaycush in Lake Huron

    Science.gov (United States)

    Binder, Thomas; Marsden, J. Ellen; Riley, Stephen; Johnson, James E.; Johnson, Nicholas; He, Ji; Ebener, Mark P.; Holbrook, Christopher; Bergstedt, Roger A.; Bronte, Charles R.; Hayden, Todd A.; Krueger, Charles C.

    2017-01-01

    Movement ecology is an important component of life history and population dynamics, and consequently its understanding can inform successful fishery management decision-making. While lake trout populations in Lake Huron have shown signs of recovery from near extinction in recent years, knowledge of their movement behavior remains incomplete. We used acoustic telemetry to describe and compare movement patterns of two Lake Huron lake trout populations: Drummond Island and Thunder Bay. Both populations showed high spawning site fidelity, with no evidence of co-mingling during non-spawning season. Detections between spawning periods were mainly limited to receivers within 100 km of spawning locations, and suggested that the two populations likely remained segregated throughout the year. Drummond Island fish, which spawn inside the Drummond Island Refuge, primarily dispersed east into Canadian waters of Lake Huron, with 79–92% of fish being detected annually on receivers outside the refuge. In contrast, Thunder Bay fish tended to disperse south towards Saginaw Bay. Large proportions (i.e., > 80%) of both populations were available to fisheries outside the management zone containing their spawning location. Thunder Bay fish moved relatively quickly to overwinter habitat after spawning, and tended to repeat the same post-spawning movement behavior each year. The consistent, predictable movement of both populations across management zones highlights the importance of understanding population dynamics to effective management of Lake Huron lake trout.

  9. Genetic variation underlying resistance to infectious hematopoietic necrosis virus in a steelhead trout (Oncorhynchus mykiss) population

    Science.gov (United States)

    Brieuc, Marine S. O.; Purcell, Maureen K.; Palmer, Alexander D.; Naish, Kerry A.

    2015-01-01

    Understanding the mechanisms of host resistance to pathogens will allow insights into the response of wild populations to the emergence of new pathogens. Infectious hematopoietic necrosis virus (IHNV) is endemic to the Pacific Northwest and infectious to Pacific salmon and trout (Oncorhynchus spp.). Emergence of the M genogroup of IHNV in steelhead trout O. mykiss in the coastal streams of Washington State, between 2007 and 2011, was geographically heterogeneous. Differences in host resistance due to genetic change were hypothesized to be a factor influencing the IHNV emergence patterns. For example, juvenile steelhead trout losses at the Quinault National Fish Hatchery (QNFH) were much lower than those at a nearby facility that cultures a stock originally derived from the same source population. Using a classical quantitative genetic approach, we determined the potential for the QNFH steelhead trout population to respond to selection caused by the pathogen, by estimating the heritability for 2 traits indicative of IHNV resistance, mortality (h2 = 0.377 (0.226 - 0.550)) and days to death (h2 = 0.093 (0.018 - 0.203)). These results confirm that there is a genetic basis for resistance and that this population has the potential to adapt to IHNV. Additionally, genetic correlation between days to death and fish length suggests a correlated response in these traits to selection. Reduction of genetic variation, as well as the presence or absence of resistant alleles, could affect the ability of populations to adapt to the pathogen. Identification of the genetic basis for IHNV resistance could allow the assessment of the susceptibility of other steelhead populations.

  10. Genetic variation underlying resistance to infectious hematopoietic necrosis virus in a steelhead trout (Oncorhynchus mykiss) population.

    Science.gov (United States)

    Brieuc, Marine S O; Purcell, Maureen K; Palmer, Alexander D; Naish, Kerry A

    2015-11-17

    Understanding the mechanisms of host resistance to pathogens will allow insights into the response of wild populations to the emergence of new pathogens. Infectious hematopoietic necrosis virus (IHNV) is endemic to the Pacific Northwest and infectious to Pacific salmon and trout (Oncorhynchus spp.). Emergence of the M genogroup of IHNV in steelhead trout O. mykiss in the coastal streams of Washington State, between 2007 and 2011, was geographically heterogeneous. Differences in host resistance due to genetic change were hypothesized to be a factor influencing the IHNV emergence patterns. For example, juvenile steelhead trout losses at the Quinault National Fish Hatchery (QNFH) were much lower than those at a nearby facility that cultures a stock originally derived from the same source population. Using a classical quantitative genetic approach, we determined the potential for the QNFH steelhead trout population to respond to selection caused by the pathogen, by estimating the heritability for 2 traits indicative of IHNV resistance, mortality (h² = 0.377 (0.226 - 0.550)) and days to death (h² = 0.093 (0.018 - 0.203)). These results confirm that there is a genetic basis for resistance and that this population has the potential to adapt to IHNV. Additionally, genetic correlation between days to death and fish length suggests a correlated response in these traits to selection. Reduction of genetic variation, as well as the presence or absence of resistant alleles, could affect the ability of populations to adapt to the pathogen. Identification of the genetic basis for IHNV resistance could allow the assessment of the susceptibility of other steelhead populations.

  11. Bull Trout Population Assessment in the White Salmon and Klickitat Rivers, Columbia River Gorge, Washington, 2001 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Thiesfeld, Steven L.; McPeak, Ronald H.; McNamara, Brian S. (Washington Department of Fish and Wildlife); Honanie, Isadore (Confederated Tribes and Bands, Yakama Nation)

    2002-01-01

    We utilized night snorkeling and single pass electroshocking to determine the presence or absence of bull trout Salvelinus confluentus in 26 stream reaches (3,415 m) in the White Salmon basin and in 71 stream reaches (9,005 m) in the Klickitat River basin during summer and fall 2001. We did not find any bull trout in the White Salmon River basin. In the Klickitat River basin, bull trout were found only in the West Fork Klickitat River drainage. We found bull trout in two streams not previously reported: Two Lakes Stream and an unnamed tributary to Fish Lake Stream (WRIA code number 30-0550). We attempted to capture downstream migrant bull trout in the West Fork Klickitat River by fishing a 1.5-m rotary screw trap at RM 4.3 from July 23 through October 17. Although we caught other salmonids, no bull trout were captured. The greatest limiting factor for bull trout in the West Fork Klickitat River is likely the small amount of available habitat resulting in a low total abundance, and the isolation of the population. Many of the streams are fragmented by natural falls, which are partial or complete barriers to upstream fish movement. To date, we have not been able to confirm that the occasional bull trout observed in the mainstem Klickitat River are migrating upstream into the West Fork Klickitat River.

  12. Genetic Background and Population Genetics of Hungarian Brown Trout Populations Using PCR-RFLP and Microsatellite Markers

    Directory of Open Access Journals (Sweden)

    Ágnes Ősz

    2015-12-01

    4 University of West Hungary, Mosonmagyaróvár Vár 2., 9200 Mosonmagyaróvár, Hungary Based on the analyses of the mitochondrial DNA of several European brown trout populations, five evolutionary lineages of brown trout were indentified (Atlantic, Danubian, Mediterranean, Adriatic, Marble. The species is bred primarily for stock enhancement of natural waters, however the most hatchery-maintained broodstocks originate from the Atlantic lineage. Due to the hydrogeography of Hungary our stocks should theoretically belong to the Danubian lineage; however, this has not been investigated earlier by genetic studies. For our genetic analysis, 702 fin clips were collected from two brown trout broodstocks (Lillafüred and Szilvásvárad as well as populations of natural streams (Bán, Jósva, Kemence, Apátkút, Bittva and Kölöntés in Hungary. Sequencing of the control region in mitochondrial DNA, three PCR-RFLP (mitochondrial DNA control region, lactate dehydrogenase and somatolactin genes and five microsatellite markers were used to distinguish between Danubian and Atlantic lineages of brown trout. The proportion of the mitochondrial haplotype of the Danubian lineage was low, with the exception of the Apátkúti, Kölöntés streams and Szilvásvárad broodstock. Analyses of nuclear PCR-RFLP and microsatellites markers showed various distributions of alleles characteristic of the Atlantic or Danubian lineages, although the Atlantic genotype has dominated in all population. In case of the analyses of microsatellites the polymorphism varied greatly at all locations. In addition we found several alleles that were not described earlier in other populations. Those alleles probably would be typical of Hungarian brown trout populations. Overall the populations were effectively in Hardy-Weinberg equilibrium for both PCR-RFLP and microsatellite markers. The remarkably high proportion of allochthonous Atlantic alleles in the analyzed sites is a clear indicator of the import

  13. Local Variability Mediates Vulnerability of Trout Populations to Land Use and Climate Change

    OpenAIRE

    Brooke E Penaluna; Dunham, Jason B.; Railsback, Steve F.; Ivan Arismendi; Johnson, Sherri L.; Robert E Bilby; Mohammad Safeeq; Arne E Skaugset

    2015-01-01

    Land use and climate change occur simultaneously around the globe. Fully understanding their separate and combined effects requires a mechanistic understanding at the local scale where their effects are ultimately realized. Here we applied an individual-based model of fish population dynamics to evaluate the role of local stream variability in modifying responses of Coastal Cutthroat Trout (Oncorhynchus clarkii clarkii) to scenarios simulating identical changes in temperature and stream flows...

  14. Nonnative trout invasions combined with climate change threaten persistence of isolated cutthroat trout populations in the southern Rocky Mountains

    Science.gov (United States)

    Roberts, James J.; Kurt D. Fausch,; Hooten, Mevin B.; Peterson, Douglas P.

    2017-01-01

    Effective conservation of Cutthroat Trout Oncorhynchus clarkii lineages native to the Rocky Mountains will require estimating effects of multiple stressors and directing management toward the most important ones. Recent

  15. New insight into the spawning behavior of lake trout, Salvelinus namaycush, from a recovering population in the Laurentian Great Lakes

    Science.gov (United States)

    Binder, Thomas R.; Thompson, Henry T.; Muir, Andrew M.; Riley, Stephen C.; Marsden, J. Ellen; Bronte, Charles R.; Krueger, Charles C.

    2015-01-01

    Spawning behavior of lake trout, Salvelinus namaycush, is poorly understood, relative to stream-dwelling salmonines. Underwater video records of spawning in a recovering population from the Drummond Island Refuge (Lake Huron) represent the first reported direct observations of lake trout spawning in the Laurentian Great Lakes. These observations provide new insight into lake trout spawning behavior and expand the current conceptual model. Lake trout spawning consisted of at least four distinct behaviors: hovering, traveling, sinking, and gamete release. Hovering is a new courtship behavior that has not been previously described. The apparent concentration of hovering near the margin of the spawning grounds suggests that courtship and mate selection might be isolated from the spawning act (i.e., traveling, sinking, and gamete release). Moreover, we interpret jockeying for position displayed by males during traveling as a unique form of male-male competition that likely evolved in concert with the switch from redd-building to itinerant spawning in lake trout. Unlike previous models, which suggested that intra-sexual competition and mate selection do not occur in lake trout, our model includes both and is therefore consistent with evolutionary theory, given that the sex ratio on spawning grounds is skewed heavily towards males. The model presented in this paper is intended as a working hypothesis, and further revision may become necessary as we gain a more complete understanding of lake trout spawning behavior.

  16. Study Regarding the Conformation in Four Populations of Reproduction - Female - Rainbow Trout (Oncorhynchus Mykiss From Trout Farm Fiad, County of Bistrita-Nasaud

    Directory of Open Access Journals (Sweden)

    Daniel Cocan

    2010-10-01

    Full Text Available Rainbow trout (Oncorhynchus mykiss is the main specie exploited in the salmon complexes. The reason is the plasticity and resistance to changes in environmental and disease factors, and due to fast growth rate obtained by the processes of selection and improvement that specie has undergone. In order to achieve the highest production and appropriate quality, a special role has the breeders and their performance. In addition to environmental conditions and nutrition, very important features which contribute to achieving valuable production, are: breeding age, physiological state and morphological indices. In this context, the authors propose to characterize the four populations of breeding females, taking into consideration the following factors: age, body mass index and the main morphological traits. It was followed by dynamic growth and development of breeding females aged three, four, six or eight years. The results obtained, on the reproductive performance of rainbow trout (Oncorhynchus mykiss, may help the formation of competitive breeding groups in the context of increasing economic efficiency of trout in Romania. The experiment was conducted in Fiad trout farm, Bistrita-Nasaud County, in June 2009.

  17. Thermal regimes, nonnative trout, and their influences on native Bull Trout in the Upper Klamath River Basin, Oregon

    Science.gov (United States)

    Benjamin, Joseph R.; Heltzel, Jeannie; Dunham, Jason; Heck, Michael; Banish, Nolan P.

    2016-01-01

    The occurrence of fish species may be strongly influenced by a stream’s thermal regime (magnitude, frequency, variation, and timing). For instance, magnitude and frequency provide information about sublethal temperatures, variability in temperature can affect behavioral thermoregulation and bioenergetics, and timing of thermal events may cue life history events, such as spawning and migration. We explored the relationship between thermal regimes and the occurrences of native Bull Trout Salvelinus confluentus and nonnative Brook Trout Salvelinus fontinalis and Brown Trout Salmo trutta across 87 sites in the upper Klamath River basin, Oregon. Our objectives were to associate descriptors of the thermal regime with trout occurrence, predict the probability of Bull Trout occurrence, and estimate upper thermal tolerances of the trout species. We found that each species was associated with a different suite of thermal regime descriptors. Bull Trout were present at sites that were cooler, had fewer high-temperature events, had less variability, and took longer to warm. Brook Trout were also observed at cooler sites with fewer high-temperature events, but the sites were more variable and Brook Trout occurrence was not associated with a timing descriptor. In contrast, Brown Trout were present at sites that were warmer and reached higher temperatures faster, but they were not associated with frequency or variability descriptors. Among the descriptors considered, magnitude (specifically June degree-days) was the most important in predicting the probability of Bull Trout occurrence, and model predictions were strengthened by including Brook Trout occurrence. Last, all three trout species exhibited contrasting patterns of tolerating longer exposures to lower temperatures. Tolerance limits for Bull Trout were lower than those for Brook Trout and Brown Trout, with contrasts especially evident for thermal maxima. Our results confirm the value of exploring a suite of thermal

  18. Experimental tests for heritable morphological color plasticity in non-native brown trout (Salmo trutta populations.

    Directory of Open Access Journals (Sweden)

    Peter A H Westley

    Full Text Available The success of invasive species is frequently attributed to phenotypic plasticity, which facilitates persistence in novel environments. Here we report on experimental tests to determine whether the intensity of cryptic coloration patterns in a global invader (brown trout, Salmo trutta was primarily the result of plasticity or heritable variation. Juvenile F1 offspring were created through experimental crosses of wild-caught parents and reared for 30 days in the laboratory in a split-brood design on either light or dark-colored gravel substrate. Skin and fin coloration quantified with digital photography and image analysis indicated strong plastic effects in response to substrate color; individuals reared on dark substrate had both darker melanin-based skin color and carotenoid-based fin colors than other members of their population reared on light substrate. Slopes of skin and fin color reaction norms were parallel between environments, which is not consistent with heritable population-level plasticity to substrate color. Similarly, we observed weak differences in population-level color within an environment, again suggesting little genetic control on the intensity of skin and fin colors. Taken as whole, our results are consistent with the hypothesis that phenotypic plasticity may have facilitated the success of brown trout invasions and suggests that plasticity is the most likely explanation for the variation in color intensity observed among these populations in nature.

  19. Differential susceptibility in steelhead trout populations to an emergent MD strain of infectious hematopoietic necrosis virus

    Science.gov (United States)

    Breyta, R.; Jones, Amelia; Kurath, Gael

    2014-01-01

    A significant emergence of trout-adapted MD subgroup infectious hematopoietic necrosis virus (IHNV) began in the coastal region of Washington State, USA, in 2007. This emergence event lasted until 2011 and caused both asymptomatic adult fish infection and symptomatic epidemic disease and mortality in juvenile fish. Incidence of virus during this emergence demonstrated a heterogeneous distribution among rivers of the coastal region, leaving fish populations of some rivers apparently untouched while others suffered significant and recurrent infection and mortality (Breyta et. al. 2013; Dis Aquat Org 104:179-195). In this study, we examined the possible contribution of variations in susceptibility of fish populations, age-related resistance, and virus virulence to the observed landscape heterogeneity. We found that the most significant variable was host susceptibility: by controlled experimental challenge studies steelhead trout populations with no history of IHNV infection were 1 to 3 orders of magnitude more sensitive than a fish population with a long history of IHNV infection. In addition, 2 fish populations from the same river, which descended relatively recently from a common ancestral population, demonstrated 1 to 2 orders of magnitude difference in susceptibility. Fish age-related development of resistance was most evident in the more susceptible of 2 related fish populations. Finally, the strain of virus involved in the 2007 coastal Washington emergence had high virulence but was within the range of other known M group viruses tested. These results suggest that one major driver of landscape heterogeneity in the 2007 coastal Washington IHNV emergence was variation in fish population susceptibility and that this trait may have a heritable component.

  20. High temperature increases the masculinization rate of the all-female (XX rainbow trout "Mal" population.

    Directory of Open Access Journals (Sweden)

    Karina Valdivia

    Full Text Available Salmonids are generally considered to have a robust genetic sex determination system with a simple male heterogamety (XX/XY. However, spontaneous masculinization of XX females has been found in a rainbow trout population of gynogenetic doubled haploid individuals. The analysis of this masculinization phenotype transmission supported the hypothesis of the involvement of a recessive mutation (termed mal. As temperature effect on sex differentiation has been reported in some salmonid species, in this study we investigated in detail the potential implication of temperature on masculinization in this XX mal-carrying population. Seven families issued from XX mal-carrying parents were exposed from the time of hatching to different rearing water temperatures ((8, 12 and 18°C, and the resulting sex-ratios were confirmed by histological analysis of both gonads. Our results demonstrate that masculinization rates are strongly increased (up to nearly two fold at the highest temperature treatment (18°C. Interestingly, we also found clear differences between temperatures on the masculinization of the left versus the right gonads with the right gonad consistently more often masculinized than the left one at lower temperatures (8 and 12°C. However, the masculinization rate is also strongly dependent on the genetic background of the XX mal-carrying families. Thus, masculinization in XX mal-carrying rainbow trout is potentially triggered by an interaction between the temperature treatment and a complex genetic background potentially involving some part of the genetic sex differentiation regulatory cascade along with some minor sex-influencing loci. These results indicate that despite its rather strict genetic sex determinism system, rainbow trout sex differentiation can be modulated by temperature, as described in many other fish species.

  1. Population biology of coral trout species in eastern Torres Strait: Implications for fishery management

    Science.gov (United States)

    Williams, Ashley J.; Currey, Leanne M.; Begg, Gavin A.; Murchie, Cameron D.; Ballagh, Aaron C.

    2008-09-01

    Coral trout ( Plectropomus spp.) are the main target species for commercial fishers in the eastern Torres Strait Reef Line Fishery (ETS RLF). The four species of coral trout known to occur in Torres Strait: Plectropomus leopardus, Plectropomus maculatus, Plectropomus areolatus and Plectropomus laevis are currently managed as a single species in Torres Strait, as there is no species-specific biological information available for the region which could be used to assess whether species differ in their response to fishing pressure. The aim of our study was to determine whether it is appropriate (biologically) to manage coral trout in the ETS RLF as a single species group or whether different management arrangements are required for some species. We used catch data and biological data from samples collected by commercial fishers to examine the distribution within Torres Strait and estimate a range of biological parameters for P. leopardus, P. maculatus and P. areolatus. Insufficient P. laevis samples were collected to reliably examine this species. Results indicated that the population biology, particularly the reproductive biology, of P. areolatus was substantially different to both P. leopardus and P. maculatus. Although it is difficult to predict the response to fishing, P. areolatus may be more vulnerable to fishing than P. leopardus and P. maculatus, due to the larger size at sex change observed for this species and the very low proportion of males protected by the current minimum size limit. Therefore, while the common management arrangements for P. leopardus and P. maculatus appear to be adequate for these species, separate management arrangements are needed for the sustainable harvest of P. areolatus populations in the ETS. Specifically, we recommend the introduction of a maximum size limit for P. areolatus, in addition to the current minimum size limit, which may allow a proportion of males some protection from fishing.

  2. Successional change in the Lake Superior fish community: population trends in ciscoes, rainbow smelt, and lake trout, 1958-2008

    Science.gov (United States)

    Gorman, Owen T.

    2012-01-01

    The Lake Superior fish community underwent massive changes in the second half of the 20th century. Those changes are largely reflected in changes in abundance of the adults of principal prey species, the ciscoes (Coregonus spp.), the invasive rainbow smelt (Osmerus mordax), and the principal predator, lake trout (Salvelinus namaycush). To better understand changes in species abundances, a comprehensive series of gillnet and bottom trawl data collected from 1958 to 2008 were examined. In the late 1950s/early 1960s, smelt abundance was at its maximum, wild lake trout was at its minimum, and an abundance of hatchery lake trout was increasing rapidly. The bloater (Coregonus hoyi) was the prevalent cisco in the lake; abundance was more than 300% greater than the next most abundant cisco, shortjaw cisco (C. zenithicus), followed by kiyi (C. kiyi) and lake cisco (C. artedi). By the mid-1960s, abundance of hatchery lake trout was nearing maximum, smelt abundance was beginning to decline, and abundances of all ciscoes declined, but especially that of shortjaw cisco and kiyi. By the late 1970s, recovery of wild lake trout stocks was well underway and abundances of hatchery lake trout and smelt were declining and the ciscoes were reaching their nadir. During 1980–1990, the fish community underwent a dramatic shift in organization and structure. The rapid increase in abundance of wild lake trout, concurrent with a rapid decline in hatchery lake trout, signaled the impending recovery. Rainbow smelt abundance dropped precipitously and within four years, lake cisco and bloater populations rebounded on the heels of a series of strong recruitment events. Kiyi populations showed signs of recovery by 1989, and shortjaw by 2000, though well below historic maximum abundances. High abundance of adult smelt prior to 1980 appears to be the only factor linked to recruitment failure in the ciscoes. Life history traits of the cisco species were examined to better understand their different

  3. The problem of sampling families rather than populations: Relatedness among individuals in samples of juvenile brown trout Salmo trutta L

    DEFF Research Database (Denmark)

    Hansen, Michael Møller; Eg Nielsen, Einar; Mensberg, Karen-Lise Dons

    1997-01-01

    In species exhibiting a nonrandom distribution of closely related individuals, sampling of a few families may lead to biased estimates of allele frequencies in populations. This problem was studied in two brown trout populations, based on analysis of mtDNA and microsatellites. In both samples mt......DNA haplotype frequencies differed significantly between age classes, and in one sample 17 out of 18 individuals less than 1 year of age shared one particular mtDNA haplotype. Estimates of relatedness showed that these individuals most likely represented only three full-sib families. Older trout exhibiting...

  4. Bull Trout life History, Genetics, Habitat Needs, and Limiting Factors in Central and Northeast Oregon, Annual Report 1995.

    Energy Technology Data Exchange (ETDEWEB)

    Hemmingsen, Alan R.; Buchanan, David V.; Howell, Philip J.

    1996-03-01

    To fulfill one objective of the present study, genetic characteristics of Oregon bull trout will be determined by analysis of mitochondrial and nuclear DNA. During 1995, the authors collected and sampled a total of 1,217 bull trout from 46 streams in the Columbia River Basin. DNA analysis of those samples will be conducted at University of Montana. They primarily sampled juvenile fish near natal areas to increase the likelihood of identifying discrete populations while minimizing risk of injury to large spawners. Fork lengths of all fish sampled ranged from 2.6 to 60.5 cm with a median of 12 cm. Eighty-four percent of all bull trout sampled were less than 19 cm while two percent were larger than 27 cm. Bull trout were collected by several methods, mostly by electrofishing. Eighty-six percent of all bull trout sampled were collected by electrofishing with a programmable waveform electrofisher. They observed injuries caused by electrofishing to 8% of that proportion. Based on preliminary analysis, no waveform combination used appeared less injurious than others. Highest voltages appeared less injurious than some that were lower. Frequency of electrofishing injury was significantly correlated to fork length over the range-from 4 to 26 cm. There were indications for substantial risk for such injury to bull trout larger than 26 cm. Other species found in association with bull trout included chinook salmon Oncorhynchus tshawytscha, mountain whitefish Prosopium williamsoni, rainbow trout Oncorhynchus mykiss, sculpins Cottus spp., cutthroat trout Oncorhynchus clarki, non-native brook trout Salvelinus fontinalis, and tailed frogs Ascaphus truei. Rainbow trout was the species most frequently associated with bull trout. No injury or mortality was observed for any of the associated species captured.

  5. Ongoing effects of no-take marine reserves on commercially exploited coral trout populations on the Great Barrier Reef.

    Science.gov (United States)

    Miller, Ian; Cheal, Alistair J; Emslie, Michael J; Logan, Murray; Sweatman, Hugh

    2012-08-01

    Networks of no-take marine reserves (NTMRs) are widely used for managing marine resources. Because they restrict fishing, managers need to monitor reserves to reassure stakeholders that they are achieving the intended results. In 2004, the Great Barrier Reef (GBR) Marine Park was rezoned and the area of NTMRs was greatly increased. Using manta tow we assessed the effectiveness of the new NTMRs in conserving coral trout (Plectropomus and Variola spp.), the principle targets of the GBR reef line fishery. Over a six year period, we sampled regional groups of matched pairs of similar reefs, ones closed to fishing under the rezoning and ones that remained open. Coral trout populations were significantly higher in NTMRs. While coral trout populations declined on reefs open to fishing, stocks were maintained in NTMRs, highlighting the ongoing benefits of marine reserves.

  6. Distribution of individual inbreeding coefficients, relatedness and influence of stocking on native anadromous brown trout ( Salmo trutta ) population structure

    DEFF Research Database (Denmark)

    Ruzzante, D.E.; Hansen, Michael Møller; Meldrup, Dorte

    2001-01-01

    , the proportion of locally assigned trout correlates with the populations' stocking histories, with rivers presently subjected to stocking (hatchery trout) showing low mean similar to0.73), and rivers where stocking was discontinued showing high (mean similar to0.84) proportions of local fish, probably reflecting......We examined polymorphism at seven microsatellite loci in 4023 brown trout (Salmo trutta) collected from 32 tributaries to the Limfjord, Denmark (similar to 200 km) and from two hatcheries used for stocking. Populations differ in their estimated sizes and stocking histories. Mean individual......, suggesting structure within locations. Five per cent of the genetic variance is distributed among rivers (F-ST = 0.049), but in the western, less heavily stocked, area of the Limfjord a higher proportion of the genetic variance is distributed among rivers than among locations within rivers. The reverse...

  7. First Proliferative Kidney Disease outbreak in Austria, linking to the aetiology of Black Trout Syndrome threatening autochthonous trout populations.

    Science.gov (United States)

    Gorgoglione, Bartolomeo; Kotob, Mohamed H; Unfer, Günter; El-Matbouli, Mansour

    2016-05-01

    Proliferative Kidney Disease (PKD) was diagnosed in juvenile autochthonous brown trout Salmo trutta for the first time in Austria during summer 2014. Cytology showed Tetracapsuloides bryosalmonae sporoblasts, and histology revealed sporogonic (coelozoic) and extrasporogonic (histozoic) stages. Analysis of malacosporean ribosomal small subunit revealed that this strain is closely related to European isolates, although its source is unknown. Infection and high pathogenicity were reproduced upon a pre-restocking test with specific pathogen free (SPF) juvenile trout, resulting in 100% mortality between 28 and 46 d post exposure (dpe), with high ectoparasitosis. Fish showed grade 2 of the Kidney Swelling Index and grade 3 of the PKD histological assessment. T. bryosalmonae enzootic waters were demonstrated in further locations along the River Kamp, with infected bryozoans retrieved up to 6 km upstream of the farm with the PKD outbreak. Fredericella sultana colonies collected from these locations were cultivated in laboratory conditions. Released malacospores successfully induced PKD, and contextually Black Trout Syndrome (BTS), in SPF brown trout. In the absence of co-infections mortality occurred between 59 and 98 dpe, with kidneys enlarged up to 6.74% of total body weight (normal 1.23%). This study confirms the first isolation of a pathogenic myxozoan from an Austrian river tributary of the Danube, where its 2-host life cycle is fully occurring. Its immunosuppressant action could link PKD as a key factor in the multifactorial aetiology of BTS. This T. bryosalmonae isolation provides an impetus to undertake further multi-disciplinary research, aiming to assess the impact of PKD and BTS spreading to central European regions.

  8. The effect of metal pollution on the population genetic structure of brown trout (Salmo trutta L.) residing in the River Hayle, Cornwall, UK

    Energy Technology Data Exchange (ETDEWEB)

    Durrant, Christopher J. [King' s College London, Metals Metabolism Group, Division of Diabetes and Nutritional Sciences, Franklin Wilkins Building, 150 Stamford Street, London SE1 9NH (United Kingdom); Stevens, Jamie R. [University of Exeter, Biosciences, College of Life and Environmental Sciences, Geoffrey Pope Building, Stocker Road, Exeter EX4 4QD (United Kingdom); Hogstrand, Christer [King' s College London, Metals Metabolism Group, Division of Diabetes and Nutritional Sciences, Franklin Wilkins Building, 150 Stamford Street, London SE1 9NH (United Kingdom); Bury, Nicolas R., E-mail: nic.bury@kcl.ac.uk [King' s College London, Metals Metabolism Group, Division of Diabetes and Nutritional Sciences, Franklin Wilkins Building, 150 Stamford Street, London SE1 9NH (United Kingdom)

    2011-12-15

    The River Hayle in south-west England is impacted with metals and can be divided into three regions depending on the copper and zinc concentrations: a low-metal upper section; a highly-contaminated middle section and a moderately contaminated lower section. Hayle river water is toxic to metal-naive brown trout, but brown trout are found in the upper and lower regions. The study aimed to evaluate the population genetic structure of River Hayle brown trout and to determine if the highly-contaminated section acts as a chemical barrier to migration. Population genetic analysis indicated that metals were not a barrier to gene flow within the river, but there was a high level of differentiation observed between fish sampled at two sites in the upper region, despite being separated by only 1 km. The metal tolerance trait exhibited by this brown trout population may represent an important component of the species genetic diversity in this region. - Highlights: > River Hayle, Cornwall, UK, water is toxic to metal-naive brown trout. > Some brown trout populations resident in the River Hayle are tolerant of elevated metals (e.g. copper and zinc). > Elevated metals do not affect the gene flow between sites on the river. > The population genetic structure of the brown trout in the River Hayle appears unaffected by elevated metals. - Aquatic metal pollution does not affect the gene flow between brown trout resident below and above a metal mining waste discharge point in the River Hayle, Cornwall, UK.

  9. Sixty years of anthropogenic pressure: a spatio-temporal genetic analysis of brown trout populations subject to stocking and population declines

    DEFF Research Database (Denmark)

    Hansen, Michael Møller; Fraser, Dylan J.; Meier, Kristian

    2009-01-01

    trutta) from six neighbouring rivers in Denmark, to compare the genetic structure of wild populations before and after population declines and stocking with nonlocal strains of hatchery trout. We show that all populations have been strongly affected by stocking, with admixture proportions ranging from 14...... to 64%. Historical population genetic structure was characterized by isolation by distance and by positive correlations between historical effective population sizes and habitat area within river systems. Contemporary population genetic structure still showed isolation by distance, but also reflected...... differences among populations in hatchery trout admixture proportions. Despite significant changes to the genetic composition within populations over time, dispersal rates among populations were roughly similar before and after stocking. We also assessed whether population declines or introgression...

  10. Age at sexual maturity, sex ratio, fecundity, and longevity of isolated headwater populations of westslope cutthroat trout

    Science.gov (United States)

    Christopher C. Downs; Robert G. White; Bradley B. Shepard

    1997-01-01

    We sampled 19 isolated headwater populations of westslope cutthroat trout Oncorhynchus clarki lewisi in Montana to provide estimates of fecundity, longevity, sex ratio, and age at sexual maturity. Fecundity was estimated for 31 fish collected from two streams in the upper Missouri River drainage. Females smaller than 149 mm fork length (FL) were generally immature and...

  11. Garter snakes distributions in high elevation aquatic ecosystems: Is there a link with declining amphibian populations and nonnative trout introductions?

    Science.gov (United States)

    K.R. Matthews; R.A. Knapp; K.L. Pope

    2002-01-01

    ABSTRACT.—The dramatic amphibian population declines reported worldwide likely have important effects on their predators. In the Sierra Nevada, where amphibian declines are well documented and some are closely tied to the introduction of nonnative trout, the mountain garter snake, Thamnophis elegans elegans, preys predominately on amphibians. We surveyed 2103 high-...

  12. Genetic Inventory of Bull Trout and Westslope Cutthroat Trout in the Pend Oreille Subbasin, 2002-2003 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Maroney, Joseph R. (Kalispel Tribe of Indians, Usk, WA); Shaklee, James B.; Young, Sewall F. (Washington Department of Fish and Wildlife, Olympia, WA)

    2003-10-01

    In 2002, the Kalispel Natural Resource Department (KNRD) collected tissue samples for genetic analysis from 280 bull trout and 940 westslope cutthroat. The Washington Department of Fish and Wildlife developed and applied microsatellite DNA screening protocols for the analysis of bull trout at 13 loci and 24 loci for cutthroat trout. This project will continue collection and analysis of additional samples for the next 2 years. At that time, a final annual report will be compiled for the three-year study that will describe the genetic characteristics for bull trout and westslope cutthroat trout. The extent of hybridization of bull trout (with brook trout) and westslope cutthroat trout (with Yellowstone cutthroat trout and rainbow trout) in the Priest Lake and Lower Pend Oreille subbasins will also be examined.

  13. Genetic Inventory of Bull Trout and Westslope Cutthroat Trout in Pend Oreille Subbasin, 2003-2004 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Olson, Jason; Maroney, Joseph R.; Andersen, Todd (Kalispel Department of Natural Resources, Usk, WA)

    2004-11-01

    In 2003, the Kalispel Natural Resource Department (KNRD) collected tissue samples for genetic analysis from 209 bull trout and 1,276 westslope cutthroat. The Washington Department of Fish and Wildlife developed and applied microsatellite DNA screening protocols for the analysis of bull trout at 13 loci and 24 loci for cutthroat trout. This project will continue collection and analysis of additional samples next year. At that time, a final annual report will be compiled for the three-year study that will describe the genetic characteristics for bull trout and westslope cutthroat trout. The extent of hybridization of bull trout (with brook trout) and westslope cutthroat trout (with Yellowstone cutthroat trout and rainbow trout) in the Priest Lake and Lower Pend Oreille subbasins will also be examined.

  14. Genetic restoration of a stocked brown trout Salmo trutta population using microsatellite DNA analysis of historical and contemporary samples

    DEFF Research Database (Denmark)

    Hansen, Michael Møller; Bekkevold, Dorte; Jensen, L.F.;

    2006-01-01

    -admixed individuals nevertheless remained in the wild-caught samples. In addition, two resident populations in isolated tributaries were found to be indigenous. The indigenous anadromous individuals from the Skjern River were unlikely to have been recruited from either the isolated tributary populations......1. Gene flow from domesticated to wild populations is a major threat to wild salmonid fish. However, few studies have addressed how populations could be restored after admixture has occurred. We analysed the prospects for restoring the previously intensively stocked brown trout population...... of the Skjern River, Denmark, by identifying remaining non-admixed individuals to be used for supportive breeding. 2. We analysed microsatellite DNA markers in historical (1940-50s) and contemporary (1992-2004) samples from the Skjern River system, from the strain of domesticated trout previously used...

  15. Ulcer disease of trout

    Science.gov (United States)

    Fish, F.F.

    1934-01-01

    During the summer of 1933, lesions of a disease were noted among some fingerling brook, rainbow, blackspotted, and lake trout at the Cortland (New York) trout hatchery. Although these lesions bore a marked superficial resemblance to those of furunculosis, they were sufficiently atypical to warrant further investigation. A more detailed examination of the lesions proved them to be of a distinct disease, which for lack of a better name is herein called "ulcer disease," for the lesions closely resemble those described by Calkins (1899) under this name. Because of the marked resemblance to furunculosis, ulcer disease has not been generally recognized by trout culturists, and any ulcer appearing on fish has been ascribed by them to furunculosis without further question.

  16. Genetic and Phenotypic Catalog of Native Resident Trout of the interior Columbia River Basin : FY-2001 Report : Populations in the Wenatchee, Entiat, Lake Chelan and Methow River Drainages.

    Energy Technology Data Exchange (ETDEWEB)

    Trotter, Patrick C.

    2001-10-01

    The 1994 Fish and Wildlife Program of the Northwest Power Planning Council specifies the recovery and preservation of population health of native resident fishes of the Columbia River Basin. Among the native resident species of concern are interior rainbow trout of the Columbia River redband subspecies Oncorhynchus mykiss gairdneri 1 and westslope cutthroat trout O. clarki lewisi. The westslope cutthroat trout has been petitioned for listing under the U. S. Endangered Species Act (American Wildlands et al. 1997). Before at-risk populations can be protected, their presence and status must be established. Where introgression from introduced species is a concern, as in the case of both westslope cutthroat trout and redband rainbow trout, genetic issues must be addressed as well. As is true with native trout elsewhere in the western United States (Behnke 1992), most of the remaining pure populations of these species in the Columbia River Basin are in relatively remote headwater reaches. The objective of this project was to photo-document upper Columbia Basin native resident trout populations in Washington, and to ascertain their species or subspecies identity and relative genetic purity using a nonlethal DNA technique. FY-2001 was year three (and final year) of a project in which we conducted field visits to remote locations to seek out and catalog these populations. In FY-2001 we worked in collaboration with the Wenatchee National Forest to catalog populations in the Wenatchee, Entiat, Lake Chelan, and Methow River drainages of Washington State.

  17. Genetic and phenotypic population divergence on a microgeographic scale in brown trout.

    Science.gov (United States)

    Stelkens, Rike B; Jaffuel, Geoffrey; Escher, Matthias; Wedekind, Claus

    2012-06-01

    Salmonid populations of many rivers are rapidly declining. One possible explanation is that habitat fragmentation increases genetic drift and reduces the populations' potential to adapt to changing environmental conditions. We measured the genetic and eco-morphological diversity of brown trout (Salmo trutta) in a Swiss stream system, using multivariate statistics and Bayesian clustering. We found large genetic and phenotypic variation within only 40 km of stream length. Eighty-eight percent of all pairwise F(ST) comparisons and 50% of the population comparisons in body shape were significant. High success rates of population assignment tests confirmed the distinctiveness of populations in both genotype and phenotype. Spatial analysis revealed that divergence increased with waterway distance, the number of weirs, and stretches of poor habitat between sampling locations, but effects of isolation-by-distance and habitat fragmentation could not be fully disentangled. Stocking intensity varied between streams but did not appear to erode genetic diversity within populations. A lack of association between phenotypic and genetic divergence points to a role of local adaptation or phenotypically plastic responses to habitat heterogeneity. Indeed, body shape could be largely explained by topographic stream slope, and variation in overall phenotype matched the flow regimes of the respective habitats.

  18. Allelic frequencies of two microsatellite loci in four populations of brown trout (Salmo trutta

    Directory of Open Access Journals (Sweden)

    EDIT VARDHAMI

    2014-06-01

    Full Text Available Two microsatellite loci, Str60Inra and Ssa197, were PCR amplified on 30 individuals for each populations of brown trout (Salmo trutta. A total of 120 individuals were selected from rivers of the Florence province (Italy, Valbona and Cen (Albania, Lepenci (Kosovo. There were identified 32 different alleles for Str60Inra and 41 for the locus Ssa197. Mean number of alleles ranged from 9 (Cen to 20.5 (Florence. The mean observed and expected heterosygosities values were 0.329 and 0.755, respectively. Both microsatellite loci were polymorphic. The highest value of heterozygosity was observed in Lepenci. Significant deviations from Hardy Weinberg were found in both loci.

  19. Genetic diversity and differentiation of sea trout (Salmo trutta) populations in Lithuanian rivers assessed by microsatellite DNA variation.

    Science.gov (United States)

    Samuiloviene, Aurelija; Kontautas, Antanas; Gross, Riho

    2009-11-01

    The genetic diversity and differentiation of sea trout were studied in three river basins in Lithuania: Akmena-Dane, Bartuva, and Nemunas. A total of 282 individuals were genotyped at eight microsatellite loci. A similar level of genetic diversity was found in all of the populations studied: mean allelic richness ranged from 3.64 to 5.03, and average expected heterozygosity ranged from 0.588 to 0.721. Significant genetic divergence was observed among the different river basins as well as between populations within the drainages. All pairwise F (ST) values were highly significant, ranging from 0.027 to 0.197. The analysis of molecular variance showed rather weak hierarchical population structuring within the Nemunas basin, which may be explained by extensive gene flow among different river basins or, alternatively, reflect the influence of artificial breeding. Information on genetic diversity and differentiation of the Lithuanian sea trout populations will be useful for future management decisions.

  20. The effect of recurrent floods on genetic composition of marble trout populations.

    Directory of Open Access Journals (Sweden)

    José Martin Pujolar

    Full Text Available A changing global climate can threaten the diversity of species and ecosystems. We explore the consequences of catastrophic disturbances in determining the evolutionary and demographic histories of secluded marble trout populations in Slovenian streams subjected to weather extremes, in particular recurrent flash floods and debris flows causing massive mortalities. Using microsatellite data, a pattern of extreme genetic differentiation was found among populations (global F(ST of 0.716, which exceeds the highest values reported in freshwater fish. All locations showed low levels of genetic diversity as evidenced by low heterozygosities and a mean of only 2 alleles per locus, with few or no rare alleles. Many loci showed a discontinuous allele distribution, with missing alleles across the allele size range, suggestive of a population contraction. Accordingly, bottleneck episodes were inferred for all samples with a reduction in population size of 3-4 orders of magnitude. The reduced level of genetic diversity observed in all populations implies a strong impact of genetic drift, and suggests that along with limited gene flow, genetic differentiation might have been exacerbated by recurrent mortalities likely caused by flash flood and debris flows. Due to its low evolutionary potential the species might fail to cope with an intensification and altered frequency of flash flood events predicted to occur with climate change.

  1. The Effect of Recurrent Floods on Genetic Composition of Marble Trout Populations

    Science.gov (United States)

    Pujolar, José Martin; Vincenzi, Simone; Zane, Lorenzo; Jesensek, Dusan; De Leo, Giulio A.; Crivelli, Alain J.

    2011-01-01

    A changing global climate can threaten the diversity of species and ecosystems. We explore the consequences of catastrophic disturbances in determining the evolutionary and demographic histories of secluded marble trout populations in Slovenian streams subjected to weather extremes, in particular recurrent flash floods and debris flows causing massive mortalities. Using microsatellite data, a pattern of extreme genetic differentiation was found among populations (global FST of 0.716), which exceeds the highest values reported in freshwater fish. All locations showed low levels of genetic diversity as evidenced by low heterozygosities and a mean of only 2 alleles per locus, with few or no rare alleles. Many loci showed a discontinuous allele distribution, with missing alleles across the allele size range, suggestive of a population contraction. Accordingly, bottleneck episodes were inferred for all samples with a reduction in population size of 3–4 orders of magnitude. The reduced level of genetic diversity observed in all populations implies a strong impact of genetic drift, and suggests that along with limited gene flow, genetic differentiation might have been exacerbated by recurrent mortalities likely caused by flash flood and debris flows. Due to its low evolutionary potential the species might fail to cope with an intensification and altered frequency of flash flood events predicted to occur with climate change. PMID:21931617

  2. Analysis of regional scale risk to whirling disease in populations of Colorado and Rio Grande cutthroat trout using Bayesian belief network model

    Science.gov (United States)

    Kolb Ayre, Kimberley; Caldwell, Colleen A.; Stinson, Jonah; Landis, Wayne G.

    2014-01-01

    Introduction and spread of the parasite Myxobolus cerebralis, the causative agent of whirling disease, has contributed to the collapse of wild trout populations throughout the intermountain west. Of concern is the risk the disease may have on conservation and recovery of native cutthroat trout. We employed a Bayesian belief network to assess probability of whirling disease in Colorado River and Rio Grande cutthroat trout (Oncorhynchus clarkii pleuriticus and Oncorhynchus clarkii virginalis, respectively) within their current ranges in the southwest United States. Available habitat (as defined by gradient and elevation) for intermediate oligochaete worm host, Tubifex tubifex, exerted the greatest influence on the likelihood of infection, yet prevalence of stream barriers also affected the risk outcome. Management areas that had the highest likelihood of infected Colorado River cutthroat trout were in the eastern portion of their range, although the probability of infection was highest for populations in the southern, San Juan subbasin. Rio Grande cutthroat trout had a relatively low likelihood of infection, with populations in the southernmost Pecos management area predicted to be at greatest risk. The Bayesian risk assessment model predicted the likelihood of whirling disease infection from its principal transmission vector, fish movement, and suggested that barriers may be effective in reducing risk of exposure to native trout populations. Data gaps, especially with regard to location of spawning, highlighted the importance in developing monitoring plans that support future risk assessments and adaptive management for subspecies of cutthroat trout.

  3. The effects of global warming on the distribution of steelhead trout (Oncorhynchus mykiss) populations on the Alaska Peninsula, Alaska, 1992 progress report.

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — An investigation to determine the distribution, age and size structure, and sex composition of steelhead trout (Oncorhynchus mykiss) populations of the Alaska...

  4. The effects of global warming on the distribution of steelhead trout (Oncorhynchus mykiss) populations on the Alaska Peninsula, Alaska, 1995 final report.

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — An investigation to determine the distribution and population characteristics of steelhead trout (Oncorhynchus mykiss) on the Alaska Peninsula, Alaska, was conducted...

  5. Genetic and Phenotypic Catalog of Native Resident Trout of the Interior Columbia River Basin; Populations of the Upper Yakima Basin, 1997-1998 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Trotter, Patrick C. (Fishery Science Consultant, Seattle, WA); McMillan, Bill; Gayeski, Nick (Washington Trout, Duvall, WA)

    1999-10-01

    The objective of this project is to photo-document upper Columbia Basin native resident trout populations in Washington, and to ascertain their species or subspecies identity and relative genetic purity using a nonlethal DNA technique.

  6. Long-term trends in naturalized rainbow trout (Oncorhynchus mykiss) populations in the upper Esopus Creek, Ulster County, New York, 2009–15

    Science.gov (United States)

    George, Scott D.; Baldigo, Barry P.

    2016-05-13

    The U.S. Geological Survey, in cooperation with Cornell Cooperative Extension of Ulster County, New York State Energy Research and Development Authority, the New York State Department of Environmental Conservation, and the New York City Department of Environmental Protection, surveyed fish communities annually on the main stem and tributaries of the upper Esopus Creek, Ulster County, New York, from 2009 to 2015. This report summarizes the density, biomass, and size structure of rainbow trout (Oncorhynchus mykiss) and brown trout (Salmo trutta) populations from the 2015 surveys along with data from the preceding 6 years. The mean density of rainbow trout populations in 2015 was 98 fish per 0.1 hectare, which was the highest value observed since 2010, and the mean biomass of rainbow trout populations in 2015 was 864 grams per 0.1 hectare, which was the highest value observed since 2012.

  7. Bull Trout (Salvelinus Confluentus) Population and Habitat Surveys in the McKenzie and Middle Fork Willamette Basins, 2000 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Taylor, Greg

    2000-11-28

    Prior to 1978, Dolly Varden Salvelinus malma were classified into an anadromous and interior form. Cavender (1978) classified the interior form as a distinct species, Salvelinus confluentus, the bull trout. Bull trout are large char weighing up to 18 kg and growing to over one meter in length (Goetz 1989). They are distinguished by a broad flat head, large downward curving maxillaries that extend beyond the eye, a well developed fleshy knob and a notch in the lower terminus of the snout, and light colored spots normally smaller than the pupil of the eye (Cavender 1978). Bull trout are found throughout northwestern North America from lat. 41{sup o}N to lat. 60{sup o}N. In Oregon, bull trout were once distributed throughout 12 basins in the Klamath and Columbia River systems including the Clackamas, Santiam, McKenzie and Middle Fork Willamette sub-basins west of the Cascades (Buchanan et al. 1997). However, it is believed bull trout have been extirpated from west of the Cascades with the exception of the McKenzie sub-basin. Before 1963, bull trout in the McKenzie sub-basin were a contiguous population from the mouth to Tamolitch Falls. Following the construction of Cougar and Trail Bridge Reservoirs there are three isolated populations: (1) mainstem McKenzie and tributaries from the mouth to Trail Bridge Reservoir. (2) mainstem McKenzie and tributaries above Trail Bridge Reservoir to Tamolitch Falls. (3) South Fork McKenzie and tributaries above Cougar Reservoir. The study area includes the three aforementioned McKenzie populations, and the Middle Fork Willamette and tributaries above Hills Creek Reservoir. We monitored bull trout populations in the McKenzie and Middle Fork Willamette basins using a combination of sampling techniques including: spawning surveys, standard pool counts, juvenile trapping, radio tracking, electronic fish counters, and a modified Hankin and Reeves protocol to estimate juvenile abundance and density. In addition, we continued to

  8. A legacy of divergent fishery management regimes and the resilience of rainbow and cutthroat trout populations in Lake Crescent, Olympic National Park, Washington

    Science.gov (United States)

    Brenkman, Samuel J.; Duda, Jeffrey J.; Kennedy, Philip R.; Baker, Bruce M.

    2014-01-01

    As a means to increase visitation, early fisheries management in the National Park Service (NPS) promoted sport harvest and hatchery supplementation. Today, NPS management objectives focus on the preservation of native fish. We summarized management regimes of Olympic National Park's Lake Crescent, which included decades of liberal sport harvest and hatchery releases of 14.3 million salmonids. Notably, nonnative species failed to persist in the lake. Complementary analyses of annual redd counts (1989–2012) and genetics data delineated three sympatric trout (one rainbow; two cutthroat) populations that exhibited distinct spatial and temporal spawning patterns, variable emergence timings, and genetic distinctiveness. Allacustrine rainbow trout spawned in the lake outlet from January to May. Cutthroat trout spawned in the major inlet tributary (Barnes Creek) from February to June and in the outlet river (Lyre) from September to March, an unusual timing for coastal cutthroat trout. Redd counts for each species were initially low (rainbow = mean 89; range 37–159; cutthroat = mean 93; range 18–180), and significantly increased for rainbow trout (mean 306; range 254–352) after implementation of catch-and-release regulations. Rainbow and cutthroat trout reached maximum sizes of 10.4 kg and 5.4 kg, respectively, and are among the largest throughout their native ranges. Morphometric analyses revealed interspecific differences but no intraspecific differences between the two cutthroat populations. Genetic analyses identified three distinct populations and low levels (9–17%) of interspecific hybridization. Lake Crescent rainbow trout were genetically divergent from 24 nearby Oncorhynchus mykiss populations, and represented a unique evolutionary legacy worthy of protection. The indigenous and geographically isolated Lake Crescent trout populations were resilient to overharvest and potential interactions with introduced fish species.

  9. Bull Trout (Salvelinus Confluentus) Population and Habitat Surveys in the McKenzie and Middle Fork Willamette Basins, 2001 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Taylor, Greg

    2003-02-01

    Prior to 1978, bull trout were commonly known as dolly varden (Salvelinus malma) and were classified into an anadromous and interior form. Cavender (1978) described the interior form as a distinct species, classifying it as Salvelinus confluentus, the bull trout. Bull trout are large char weighing up to 18 kg and growing to over one meter in length (Goetz 1994). They are distinguished by a broad flat head, large downward curving maxillaries that extend beyond the eye, a fleshy knob and a notch in the lower terminus of the snout, and light colored spots normally smaller than the pupil of the eye (Cavender 1978). Bull trout are found throughout northwestern North America from latitude 41{sup o}N to 60{sup o}N. In Oregon, bull trout were once distributed throughout 12 basins in the Klamath and Columbia River systems including the Clackamas, Santiam, McKenzie and Middle Fork Willamette subbasins west of the Cascades (Buchanan et al. 1997). However, it is likely that bull trout have been extirpated from west of the Cascades with the exception of the McKenzie sub-basin. McKenzie River bull trout were a contiguous population from the mouth to Tamolitch Falls prior to 1963. Three populations were isolated following the construction of Cougar and Trail Bridge Reservoirs which include the mainstem McKenzie and tributaries from the mouth to Trail Bridge Reservoir, mainstem McKenzie and tributaries above Trail Bridge Reservoir to Tamolitch Falls, and the South Fork McKenzie and tributaries above Cougar Reservoir. On June 10, 1998 the U.S. Fish and Wildlife Service (USFWS) listed the Columbia River bull trout population segment as Threatened under the federal Endangered Species Act and Buchanan et al. (1997) listed the bull trout population in the mainstem McKenzie as ''of special concern'', the South Fork McKenzie population as ''high risk of extinction,'' and the population above Trail Bridge Reservoir as ''high risk of

  10. Distribution of individual inbreeding coefficients, relatedness and influence of stocking on native anadromous brown trout ( Salmo trutta ) population structure

    DEFF Research Database (Denmark)

    Ruzzante, D.E.; Hansen, Michael Møller; Meldrup, Dorte

    2001-01-01

    We examined polymorphism at seven microsatellite loci in 4023 brown trout (Salmo trutta) collected from 32 tributaries to the Limfjord, Denmark (similar to 200 km) and from two hatcheries used for stocking. Populations differ in their estimated sizes and stocking histories. Mean individual...... inbreeding coefficients do not differ among locations within rivers. Relatedness varies between sites within rivers indicating varied local dynamics at a very small geographical scale. Relatedness is sometimes lower than expected among an equal number of simulated individuals with randomized genotypes...... is true of the eastern, more heavily stocked, area of the Limfjord. Here, a higher proportion of the genetic variance is distributed among locations within rivers than among rivers. Assignment tests reveal that the majority of trout (mean 77% of all fish) are more probably of local origin than hatchery...

  11. Population Structure of Columbia River Basin Chinook Salmon and Steelhead Trout, Technical Report 2001.

    Energy Technology Data Exchange (ETDEWEB)

    Brannon, E.L.; National Science Foundation (U.S.)

    2002-08-01

    The population structure of chinook salmon and steelhead trout is presented as an assimilation of the life history forms that have evolved in synchrony with diverse and complex environments over their Pacific range. As poikilotherms, temperature is described as the overwhelming environmental influence that determines what life history options occur and where they are distributed. The different populations represent ecological types referred to as spring-, summer-, fall, and winter-run segments, as well as stream- and ocean-type, or stream- and ocean-maturing life history forms. However, they are more correctly described as a continuum of forms that fall along a temporal cline related to incubation and rearing temperatures that determine spawn timing and juvenile residence patterns. Once new habitats are colonized, members of the founding populations spread through adaptive evolution to assume complementary life history strategies. The related population units are collectively referred to as a metapopulation, and members most closely associated within common temporal and geographic boundaries are designated as first-order metapopulations. Population structure of chinook salmon and steelhead in the Columbia Basin, therefore, is the reflection of the genetic composition of the founding source or sources within the respective region, shaped by the environment, principally temperature, that defines life history evolutionary strategy to maximize fitness under the conditions delineated. The complexity of structure rests with the diversity of opportunities over the elevations that exist within the Basin. Consistent with natural selection, rather than simply attempting to preserve populations, the challenge is to provide opportunities to expand their range to new or restored habitat that can accommodate genetic adaptation as directional environmental changes are elaborated. Artificial propagation can have a critical role in this process, and the emphasis must be placed on

  12. Life history, population viability, and the potential for local adaptation in isolated trout populations

    Science.gov (United States)

    K. J. Carim; Y. Vindenes; L. A. Eby; C. Barfoot; L. A. Vollestad

    2017-01-01

    Habitat loss and fragmentation have caused population decline across taxa through impacts on life history diversity, dispersal patterns, and gene flow. Yet, intentional isolation of native fish populations is a frequently used management strategy to protect against negative interactions with invasive fish species. We evaluated the population viability and genetic...

  13. Genetic variation for growth rate, feed conversion efficiency, and disease resistance exists within a farmed population of rainbow trout

    DEFF Research Database (Denmark)

    Henryon, Mark; Jokumsen, Alfred; Berg, Peer

    2002-01-01

    The objective of this study was to test that additive genetic (co)variation for survival, growth rate, feed conversion efficiency, and resistance to viral haemorrhagic septicaemia (VHS) exists within a farmed population of rainbow trout. Thirty sires and 30 dams were mated by a partly factorial...... the predicted breeding values for VHS resistance and the predicted breeding values for the body weights, body length, and feed conversion efficiencies. These results demonstrate that additive genetic (co)variation for growth rate, feed conversion efficiency, and VHS resistance does exist within the farmed...

  14. Investigating the phenology of seaward migration of juvenile brown trout (Salmo trutta) in two European populations

    DEFF Research Database (Denmark)

    Winter, E R.; Tummers, J. S.; Aarestrup, Kim;

    2016-01-01

    Recent evidence supports the existence of a downstream autumn-migratory phenotype in juvenile anadromous brown trout (Salmo trutta), however the precise timing, extent and ecological significance of such behaviour remains ambiguous. We investigated the phenology of downstream migration of wild...

  15. The effects of medieval dams on genetic divergence and demographic history in brown trout populations

    DEFF Research Database (Denmark)

    Hansen, Michael Møller; Limborg, Morten; Ferchaud, A.-L.;

    2014-01-01

    genetically differentiated from anadromous trout for thousands of years, or have diverged recently due to the establishment of dams. Results: Divergence time estimates were based on 1) Approximate Bayesian Computation and 2) a coalescent-based isolation-with-gene-flow model. Both methods suggested divergence...

  16. Brooke-Spiegler syndrome.

    Science.gov (United States)

    Szepietowski, J C; Wasik, F; Szybejko-Machaj, G; Bieniek, A; Schwartz, R A

    2001-07-01

    The Brooke-Spiegler syndrome is an autosomal dominant one characterized by cylindromas, trichoepitheliomas and occasionally spiradenomas. Within a given family, some members may have cylindromas whereas others may have trichoepitheliomas or both. We describe the coexistence of trichoepithelioma papulosum multiplex (also known as epithelioma adenoides cysticum of Brooke) and cylindromas in a 30-year-old man, and discuss the relationship between these two autosomal dominant syndromes.

  17. Temporal changes in allele frequencies in a small marble trout Salmo marmoratus population threatened by extreme flood events.

    Science.gov (United States)

    Pujolar, J M; Vincenzi, S; Zane, L; Crivelli, A J

    2016-03-01

    The effect of extreme floods on the genetic composition of marble trout Salmo marmoratus living in Lipovscek, a tributary of the Soca River in Slovenia, which has been affected by multiple destructive flood events for centuries was investigated. By monitoring genetic variability during the period 2004-2011, apparent signatures of genetic erosion including a decline in observed and expected heterozygosities and allelic richness were observed. Contemporary effective population size was estimated between 11 and 55 individuals, which is congruent with census data. The data suggest asymmetric gene flow between the two sections of the river. The existence of substantial downstream migration (15-19%) was confirmed by paternity analysis. A small (1-3%) upstream migration was also suggested, which was confirmed by tagging data. Overall, low genetic diversity has not prevented the survival of the Lipovscek population, which might be a common feature of salmonid freshwater populations.

  18. Screening procedure to assess the impact of urban stormwater temperature to populations of brown trout in receiving water.

    Science.gov (United States)

    Rossi, Luca; Hari, Renata E

    2007-07-01

    The discharge of urban stormwater may cause a sudden temperature increase in receiving waters that may be harmful to fish and other aquatic organisms. A screening procedure is proposed with temperature thresholds for the runoff from roofs and roads as well as for the receiving water system to protect brown trout from thermal damage. The stormwater temperature is calculated on the basis of a simple thermodynamic estimate for different latitudes. Only receiving waters with maximum daily mean temperatures of 22 degrees C (T1) are considered potential habitats for brown trout. The maximum temperature for a 1-h exposure time with a safety margin for 100% survival is 25 degrees C (T2), the sudden temperature change at the beginning of a rain event must not exceed 7 degrees C (T3), and fish-egg development requires the daily maximum temperature in winter to be below 12 degrees C (T4). Examples of stormwater runoff from roof or road surfaces from Switzerland validate our approach within +/-0.5 degrees C. Effects of runoff into receiving waters without detailed data can be predicted within +/-0.8 degrees C. With the restriction by T1, T2 seems not to be an acute problem at Swiss latitudes. T3 could play a role, especially if a large amount of runoff is discharged in small and rather cool rivers and streams. Finally, T4 deserves more attention than hitherto given. The proposed procedure may be a useful tool for assessing the influence of urban stormwater on the temperature of the receiving waters, particularly with regard to predicting the thermal impacts of urban or suburban runoff to populations of brown trout.

  19. Patterns of hybridization of nonnative cutthroat trout and hatchery rainbow trout with native redband trout in the Boise River, Idaho

    Science.gov (United States)

    Neville, Helen M.; Dunham, Jason B.

    2011-01-01

    Hybridization is one of the greatest threats to native fishes. Threats from hybridization are particularly important for native trout species as stocking of nonnative trout has been widespread within the ranges of native species, thus increasing the potential for hybridization. While many studies have documented hybridization between native cutthroat trout Oncorhynchus clarkii and nonnative rainbow trout O. mykiss, fewer have focused on this issue in native rainbow trout despite widespread threats from introductions of both nonnative cutthroat trout and hatchery rainbow trout. Here, we describe the current genetic (i.e., hybridization) status of native redband trout O. mykiss gairdneri populations in the upper Boise River, Idaho. Interspecific hybridization was widespread (detected at 14 of the 41 sampled locations), but high levels of hybridization between nonnative cutthroat trout and redband trout were detected in only a few streams. Intraspecific hybridization was considerably more widespread (almost 40% of sampled locations), and several local populations of native redband trout have been almost completely replaced with hatchery coastal rainbow trout O. mykiss irideus; other populations exist as hybrid swarms, some are in the process of being actively invaded, and some are maintaining genetic characteristics of native populations. The persistence of some redband trout populations with high genetic integrity provides some opportunity to conserve native genomes, but our findings also highlight the complex decisions facing managers today. Effective management strategies in this system may include analysis of the specific attributes of each site and population to evaluate the relative risks posed by isolation versus maintaining connectivity, identifying potential sites for control or eradication of nonnative trout, and long-term monitoring of the genetic integrity of remaining redband trout populations to track changes in their status.

  20. The research of Recovery technology of natural populations of Dolly Varden trout%花羔红点鲑自然种群恢复技术研究

    Institute of Scientific and Technical Information of China (English)

    周旭昌; 赵莹

    2013-01-01

    This paper discusses the restoration mode of natural populations of the Dolly Varden trout spawning grounds and ecological habitats ,through constructed walls in the pond to make water stability in the forest basin of Wangqing county of Jilin province ,effectively increased the amount of Dolly varden trout ,improved natural populations of Dolly Varden trout spawning grounds and their ecological habitats environment ,itgreatly improved the Dolly Varden trout speed of recovery of natural populations.%本文讨论了花羔红点鲑自然种群产卵场和栖息地的生态修复模式,通过在吉林省汪清县南沟林场流域内修建稳汀子和稳水墙,有效的增加了花羔红点鲑在稳汀子中的数量,修复和改善了花羔红点鲑自然种群产卵场和栖息地的生态环境,极大地提高了花羔红点鲑自然种群的恢复速度。

  1. Genetic and Phenotype [Phenotypic] Catalog of Native Resident Trout of the interior Columbia River Basin : FY-99 Report : Populations of the Pend Oreille, Kettle, and Sanpoil River Basins of Colville National Forest.

    Energy Technology Data Exchange (ETDEWEB)

    Trotter, Patrick C.

    2001-05-01

    The 1994 Fish and Wildlife Program of the Northwest Power Planning Council specifies the recovery and preservation of population health of native resident fishes of the Columbia River Basin. Among the native resident species of concern are interior rainbow trout of the Columbia River redband subspecies Oncorhynchus mykiss gairdneri 1 and westslope cutthroat trout O. clarki lewisi. The westslope cutthroat trout has been petitioned for listing under the U. S. Endangered Species Act (American Wildlands et al. 1997). Before at-risk populations can be protected, their presence and status must be established. Where introgression from introduced species is a concern, as in the case of both westslope cutthroat trout and redband rainbow trout, genetic issues must be addressed as well. As is true with native trout elsewhere in the western United States (Behnke 1992), most of the remaining pure populations of these species in the Columbia River Basin are in relatively remote headwater reaches. The objective of this project is to photo-document upper Columbia Basin native resident trout populations in Washington, and to ascertain their species or subspecies identity and relative genetic purity using a nonlethal DNA technique. FY-99 was year two of a five-year project in which we conducted field visits to remote locations to seek out and catalog these populations. In FY-99 we worked in collaboration with the Colville National Forest and Kalispel Indian Tribe to catalog populations in the northeastern corner of Washington State.

  2. Diet overlap of top-level predators in recent sympatry: bull trout and nonnative lake trout

    Science.gov (United States)

    Guy, Christopher S.; McMahon, Thomas E.; Fredenberg, Wade A.; Smith, Clinton J.; Garfield, David W.; Cox, Benjamin S.

    2011-01-01

    The establishment of nonnative lake trout Salvelinus namaycush in lakes containing lacustrine–adfluvial bull trout Salvelinus confluentus often results in a precipitous decline in bull trout abundance. The exact mechanism for the decline is unknown, but one hypothesis is related to competitive exclusion for prey resources. We had the rare opportunity to study the diets of bull trout and nonnative lake trout in Swan Lake, Montana during a concomitant study. The presence of nonnative lake trout in Swan Lake is relatively recent and the population is experiencing rapid population growth. The objective of this study was to evaluate the diets of bull trout and lake trout during the early expansion of this nonnative predator. Diets were sampled from 142 bull trout and 327 lake trout during the autumn in 2007 and 2008. Bull trout and lake trout had similar diets, both consumed Mysis diluviana as the primary invertebrate, especially at juvenile stages, and kokanee Oncorhynchus nerka as the primary vertebrate prey, as adults. A diet shift from primarily M. diluviana to fish occurred at similar lengths for both species, 506 mm (476–545 mm, 95% CI) for bull trout and 495 mm (470–518 mm CI) for lake trout. These data indicate high diet overlap between these two morphologically similar top-level predators. Competitive exclusion may be a possible mechanism if the observed overlap remains similar at varying prey densities and availability.

  3. Corroborating Structural/Spatial Treatments A Brook Trout Habitat Suitability Index Case Study%动物栖息地结构、场地整治方法论证 溪红点鲑栖息地适宜性指标案例研究

    Institute of Scientific and Technical Information of China (English)

    乔·布莱恩·布雷; 杨云峰

    2011-01-01

    规划师、设计师、环境保护论者、市民以及政府官员都对环境的评估和管理方法感兴趣。其中一种评估和管理野生动物栖息地的方法最先由美国政府机构研发的数值/定量栖息地模型技术。在笔者的研究课题中,调查了美国密歇根州三条河流中溪红点鲑的栖息地适宜性模型。该研究结果表明栖息地适宜性模型的平方乘以系数208.069所预测的每一研究河段的鱼类生物量的数值,在79.5%的研究区域有效。经过验证,该模型能够用于监测在研究区域内的溪红点鲑。%Planners,designers,environmentalists,citizens,and government officials are interested in methods to assess and manage the environment.One method to assess and manage wildlife habitat is the numerical/quantitative habitat modeling technique developed primarily by governmental agencies in the United States of America.In my study I investigated the habitat suitability model of the Brook Trout(Salvelinus fontinals,Mitchill 1814) in three Michigan rivers.The results of the study indicated that the habitat suitability model squared times the coefficient of 208.069 predicts the amount of fish biomass per study reach(p0.001),explaining 79.5% of the variance.The validation of this equation suggests that the model can be employed to manage Brook Trout within the study area.

  4. Long-term effective population sizes, temporal stability of genetic composition and potential for local adaptation in anadromous brown trout ( Salmo trutta ) populations

    DEFF Research Database (Denmark)

    Hansen, Michael Møller; Ruzzante, D.E.; Eg Nielsen, Einar;

    2002-01-01

    (3 km) river showed Ne greater than or equal to 300. Assuming a stepping-stone model of gene flow we considered the relative roles of gene flow, random genetic drift and selection to assess the possibilities for local adaptation. The requirements for local adaptation were fulfilled, but only......We examined the long-term temporal (1910s to 1990s) genetic variation at eight microsatellite DNA loci in brown trout (Salmo trutta L) collected from five anadromous populations in Denmark to assess the long-term stability of genetic composition and to estimate effective population sizes (N......-e). Contemporary and historical samples consisted of tissue and archived scales, respectively. Pairwise Theta(ST) estimates, a hierarchical analysis of molecular variance (AMOVA) and multidimensional scaling analysis of pairwise genetic distances between samples revealed much closer genetic relationships among...

  5. Status and trends of the rainbow trout population in the Lees Ferry reach of the Colorado River downstream from Glen Canyon Dam, Arizona, 1991–2009

    Science.gov (United States)

    Makinster, Andrew S.; Persons, William R.; Avery, Luke A.

    2011-01-01

    The Lees Ferry reach of the Colorado River, a 25-kilometer segment of river located immediately downstream from Glen Canyon Dam, has contained a nonnative rainbow trout (Oncorhynchus mykiss) sport fishery since it was first stocked in 1964. The fishery has evolved over time in response to changes in dam operations and fish management. Long-term monitoring of the rainbow trout population downstream of Glen Canyon Dam is an essential component of the Glen Canyon Dam Adaptive Management Program. A standardized sampling design was implemented in 1991 and has changed several times in response to independent, external scientific-review recommendations and budget constraints. Population metrics (catch per unit effort, proportional stock density, and relative condition) were estimated from 1991 to 2009 by combining data collected at fixed sampling sites during this time period and at random sampling sites from 2002 to 2009. The validity of combining population metrics for data collected at fixed and random sites was confirmed by a one-way analysis of variance by fish-length class size. Analysis of the rainbow trout population metrics from 1991 to 2009 showed that the abundance of rainbow trout increased from 1991 to 1997, following implementation of a more steady flow regime, but declined from about 2000 to 2007. Abundance in 2008 and 2009 was high compared to previous years, which was likely the result of increased early survival caused by improved habitat conditions following the 2008 high-flow experiment at Glen Canyon Dam. Proportional stock density declined between 1991 and 2006, reflecting increased natural reproduction and large numbers of small fish in samples. Since 2001, the proportional stock density has been relatively stable. Relative condition varied with size class of rainbow trout but has been relatively stable since 1991 for fish smaller than 152 millimeters (mm), except for a substantial decrease in 2009. Relative condition was more variable for larger

  6. Consistent loss of genetic diversity in isolated cutthroat trout populations independent of habitat size and quality

    Science.gov (United States)

    Kellie J. Carim; Lisa A. Eby; Craig A. Barfoot; Matthew C. Boyer

    2016-01-01

    Fragmentation and isolation of wildlife populations has reduced genetic diversity worldwide, leaving many populations vulnerable to inbreeding depression and local extinction. Nonetheless, isolation is protecting many native aquatic species from interactions with invasive species, often making reconnection an unrealistic conservation strategy. Isolation management is...

  7. Agonistic behavior among three stocked trout species in a novel reservoir fish community

    Science.gov (United States)

    Budy, Phaedra; Hafen, Konrad

    2015-01-01

    The popularity of reservoirs to support sport fisheries has led to the stocking of species that did not co-evolve, creating novel reservoir fish communities. In Utah, the Bear Lake strain of Bonneville Cutthroat Trout Oncorhynchus clarkii utah and tiger trout (female Brown Trout Salmo trutta × male Brook Trout Salvelinus fontinalis) are being more frequently added to a traditional stocking regimen consisting primarily of Rainbow TroutO. mykiss. Interactions between these three predatory species are not well understood, and studies evaluating community interactions have raised concern for an overall decrease of trout condition. To evaluate the potential for negative interactions among these species, we tested aggression in laboratory aquaria using three-species and pairwise combinations at three densities. Treatments were replicated before and after feeding. During the three-species trials Rainbow Trout initiated 24.8 times more aggressive interactions than Cutthroat Trout and 10.2 times more aggressive interactions than tiger trout, and tiger trout exhibited slightly (1.9 times) more aggressive initiations than Cutthroat Trout. There was no significant difference in behavior before versus after feeding for any species, and no indication of increased aggression at higher densities. Although Rainbow Trout in aquaria may benefit from their bold, aggressive behavior, given observations of decreased relative survival in the field, these benefits may be outweighed in reservoirs, possibly through unnecessary energy expenditure and exposure to predators.

  8. Lake trout (Salvelinus namaycush) suppression for bull trout (Salvelinus confluentus) recovery in Flathead Lake, Montana, North America

    Science.gov (United States)

    Hansen, Michael J.; Hansen, Barry S; Beauchamp, David A.

    2016-01-01

    Non-native lake trout Salvelinus namaycush displaced native bull trout Salvelinus confluentus in Flathead Lake, Montana, USA, after 1984, when Mysis diluviana became abundant following its introduction in upstream lakes in 1968–1976. We developed a simulation model to determine the fishing mortality rate on lake trout that would enable bull trout recovery. Model simulations indicated that suppression of adult lake trout by 75% from current abundance would reduce predation on bull trout by 90%. Current removals of lake trout through incentivized fishing contests has not been sufficient to suppress lake trout abundance estimated by mark-recapture or indexed by stratified-random gill netting. In contrast, size structure, body condition, mortality, and maturity are changing consistent with a density-dependent reduction in lake trout abundance. Population modeling indicated total fishing effort would need to increase 3-fold to reduce adult lake trout population density by 75%. We conclude that increased fishing effort would suppress lake trout population density and predation on juvenile bull trout, and thereby enable higher abundance of adult bull trout in Flathead Lake and its tributaries.

  9. Defining terminally differentiating B cell populations in rainbow trout immune tissues using the transcription factor XbpI.

    Science.gov (United States)

    Barr, Maggie; Mott, Katrina; Zwollo, Patty

    2011-12-01

    The nature of antibody-secreting cells in the rainbow trout is poorly defined. Here we describe a flow cytometric approach to help differentiate between four major trout B cell subsets present during terminal B cell differentiation: resting B cells, activated B cells, plasmablasts, and plasma cells. To aid in the identification of B cell subsets, the LPS-inducible transcription factor XbpI-S was used as a marker. An antibody specific to the stable form of inducible transcription factor X-box protein I (XbpI) was generated, which detects XbpI-S protein expression for species within the Oncorhyncus genus, including rainbow trout. Combinatorial expression patterns, or B cell signatures, were established using antibodies to XbpI-S, Pax5, and IgM in combination with a proliferation marker. We show that XbpI-S induction in trout splenic B cells increases throughout a 10-day in vitro LPS-induction period and that increased XbpI-S expression correlates with increased HCmu expression in the cell. PBLs displayed a lower level of XbpI-S induction during this incubation period, compared to spleen. We conclude that trout B cells follow a highly conserved B cell activation pathway, albeit slower than what has been observed in mammalian species. The use of XbpI-S as an activation marker for trout humoral immune activation promises to be useful for future in vivo studies, and can be applied to a broad range of teleost species. Copyright © 2011 Elsevier Ltd. All rights reserved.

  10. Use of an annular chamber for testing thermal preference of westslope cutthroat trout and rainbow trout

    Science.gov (United States)

    McMahon, T.E.; Bear, E.A.; Zale, A.V.

    2008-01-01

    Remaining populations of westslope cutthroat trout (Oncorhynchus clarkii lewisi) in western North America are primarily confined to cold headwaters whereas nonnative rainbow trout (Oncorhynchus mykiss) predominate in warmer, lower elevation stream sections historically occupied by westslope cutthroat trout. We tested whether differing thermal preferences could account for the spatial segregation observed in the field. Thermal preferences of age-1 westslope cutthroat trout and rainbow trout (125 to 150 mm total length) were assessed in the laboratory using a modified annular preference chamber at acclimation temperatures of 10, 12, 14, and 16??C Final preferred temperature of westslope cutthroat trout (14.9??C) was similar to that of rainbow trout (14.8??C) when tested in a thermal gradient of 11-17??C The high degree of overlap in thermal preference indicates the two species have similar thermal niches and a high potential for competition. We suggest several modifications to the annular preference chamber to improve performance in future studies.

  11. Local variability mediates vulnerability of trout populations to land use and climate change

    Science.gov (United States)

    Brooke E. Penaluna; Jason B. Dunham; Steve F. Railsback; Ivan Arismendi; Sherri L. Johnson; Robert E. Bilby; Mohammad Safeeq; Arne E. Skaugset; James P. Meador

    2015-01-01

    Land use and climate change occur simultaneously around the globe. Fully understanding their separate and combined effects requires a mechanistic understanding at the local scale where their effects are ultimately realized. Here we applied an individual-based model of fish population dynamics to evaluate the role of local stream variability in modifying responses of...

  12. Effects of passage barriers on demographics and stability properties of a virtual trout populations

    Science.gov (United States)

    Bret Harvey; Steven Railsback

    2011-01-01

    Habitat fragmentation is widely assumed to have negative effects on populations and communities, but some effects of fragmentation are subtle, difficult to measure and not always negative. For stream fish, barriers to upstream passage, such as waterfalls or culverts with perched outlets, are a common cause of fragmentation. We explored the effects of barriers on a...

  13. Spatially and temporally fluctuating selection at non-MHC immune genes: evidence from TAP polymorphism in populations of brown trout ( Salmo trutta , L.)

    DEFF Research Database (Denmark)

    Jensen, L.F.; Hansen, Michael Møller; Mensberg, Karen-Lise Dons;

    2008-01-01

    Temporal samples of Danish brown trout (Salmo trutta) from populations representing varying geographical scales were analysed using eight putatively neutral microsatellite loci and two microsatellite loci embedded in TAP genes (Transporter associated with Antigen Processing). These genes encode....... Moreover, signals of divergent selection among temporal samples within localities suggest that selection also might fluctuate at a temporal scale. These results suggest that immune genes other than the classical MHC class I and II might be subject to selection and warrant further studies of functional...

  14. Patterns of hybridization among cutthroat trout and rainbow trout in northern Rocky Mountain streams.

    Science.gov (United States)

    McKelvey, Kevin S; Young, Michael K; Wilcox, Taylor M; Bingham, Daniel M; Pilgrim, Kristine L; Schwartz, Michael K

    2016-02-01

    Introgressive hybridization between native and introduced species is a growing conservation concern. For native cutthroat trout and introduced rainbow trout in western North America, this process is thought to lead to the formation of hybrid swarms and the loss of monophyletic evolutionary lineages. Previous studies of this phenomenon, however, indicated that hybrid swarms were rare except when native and introduced forms of cutthroat trout co-occurred. We used a panel of 86 diagnostic, single nucleotide polymorphisms to evaluate the genetic composition of 3865 fish captured in 188 locations on 129 streams distributed across western Montana and northern Idaho. Although introgression was common and only 37% of the sites were occupied solely by parental westslope cutthroat trout, levels of hybridization were generally low. Of the 188 sites sampled, 73% contained ≤5% rainbow trout alleles and 58% had ≤1% rainbow trout alleles. Overall, 72% of specimens were nonadmixed westslope cutthroat trout, and an additional 3.5% were nonadmixed rainbow trout. Samples from seven sites met our criteria for hybrid swarms, that is, an absence of nonadmixed individuals and a random distribution of alleles within the sample; most (6/7) were associated with introgression by Yellowstone cutthroat trout. In streams with multiple sites, upstream locations exhibited less introgression than downstream locations. We conclude that although the widespread introduction of nonnative trout within the historical range of westslope cutthroat trout has increased the incidence of introgression, sites containing nonadmixed populations of this taxon are common and broadly distributed.

  15. Evidence of climate-induced range contractions in bull trout Salvelinus confluentus in a Rocky Mountain watershed, U.S.A.

    Directory of Open Access Journals (Sweden)

    Lisa A Eby

    Full Text Available Many freshwater fish species are considered vulnerable to stream temperature warming associated with climate change because they are ectothermic, yet there are surprisingly few studies documenting changes in distributions. Streams and rivers in the U.S. Rocky Mountains have been warming for several decades. At the same time these systems have been experiencing an increase in the severity and frequency of wildfires, which often results in habitat changes including increased water temperatures. We resampled 74 sites across a Rocky Mountain watershed 17 to 20 years after initial samples to determine whether there were trends in bull trout occurrence associated with temperature, wildfire, or other habitat variables. We found that site abandonment probabilities (0.36 were significantly higher than colonization probabilities (0.13, which indicated a reduction in the number of occupied sites. Site abandonment probabilities were greater at low elevations with warm temperatures. Other covariates, such as the presence of wildfire, nonnative brook trout, proximity to areas with many adults, and various stream habitat descriptors, were not associated with changes in probability of occupancy. Higher abandonment probabilities at low elevation for bull trout provide initial evidence validating the predictions made by bioclimatic models that bull trout populations will retreat to higher, cooler thermal refuges as water temperatures increase. The geographic breadth of these declines across the region is unknown but the approach of revisiting historical sites using an occupancy framework provides a useful template for additional assessments.

  16. Genetic detection of sex-specific dispersal in historical and contemporary populations of anadromous brown trout Salmo trutta

    DEFF Research Database (Denmark)

    Bekkevold, Dorte; Hansen, Michael Møller; Mensberg, Karen-Lise Dons

    2004-01-01

    The study of sex-biased dispersal has attracted considerable attention in birds and mammals, but less in other taxa, including fishes. We analysed sex-specific dispersal in historical (1910s and 1950s) and contemporary (1990s) samples of anadromous brown trout Salmo trutta. We tested the hypothesis...

  17. Changes in Habitat and Populations of Steelhead Trout, Coho Salmon, and Chinook Salmon in Fish Creek, Oregon; Habitat Improvement, 1983-1987 Final Report.

    Energy Technology Data Exchange (ETDEWEB)

    Everest, Fred H. (Oregon State University, Pacific Northwest Forest and Range Experiment Station, Corvallis, OR); Hohler, David B.; Cain, Thomas C. (Mount Hood National Forest, Clackamas River Ranger District, Estacada, OR)

    1988-03-01

    Construction and evaluation of salmonid habitat improvements on Fish Creek, a tributary of the upper Clackamas River, began in 1982 as a cooperative venture between the Estacada Ranger District, Mt. Hood National Forest, and the Anadromous Fish Habitat Research Unit of the Pacific Northwest Research Station (PNW), USDA Forest Service. The project was initially conceived as a 5-year effort (1982-1987) to be financed with Forest Service funds. The habitat improvement program and the evaluation of improvements were both expanded in mid-1983 when the Bonneville Power Administration (BPA) entered into an agreement with the Mt. Hood National Forest to cooperatively fund work on Fish Creek. Habitat improvement work in the basin is guided by the Fish Creek Habitat Rehabilitation-Enhancement Framework developed cooperatively by the Estacada Ranger District, the Oregon Department of Fish and Wildlife, and the Pacific Northwest Research Station. The framework examines potential factors limiting production of salmonids in the basin, and the appropriate habitat improvement measures needed to address the limiting factors. Habitat improvement work in the basin has been designed to: (1) improve quantity, quality, and distribution of spawning habitat for coho and spring chinook salmon and steelhead trout, (2) increase low flow rearing habitat for steelhead trout and coho salmon, (3) improve overwintering habitat for coho salmon and steelhead trout, (4) rehabilitate riparian vegetation to improve stream shading to benefit all species, and (5) evaluate improvement projects from a drainage wide perspective. The objectives of the evaluation include: (1) Drainage-wide evaluation and quantification of changes in salmonid spawning and rearing habitat resulting from a variety of habitat improvements. (2) Evaluation and quantification of changes in fish populations and biomass resulting from habitat improvements. (3) Benefit-cost analysis of habitat improvements.

  18. Brown Trout removal effects on short-term survival and movement of Myxobolus cerebralis-resistant rainbow trout

    Science.gov (United States)

    Fetherman, Eric R.; Winkelman, Dana L.; Bailey, Larissa L.; Schisler, George J.; Davies, K.

    2015-01-01

    Following establishment of Myxobolus cerebralis (the parasite responsible for salmonid whirling disease) in Colorado, populations of Rainbow Trout Oncorhynchus mykissexperienced significant declines, whereas Brown Trout Salmo trutta densities increased in many locations across the state, potentially influencing the success of M. cerebralis-resistant Rainbow Trout reintroductions. We examined the effects of Brown Trout removal on the short-term (3-month) survival and movement of two crosses of reintroduced, M. cerebralis-resistant Rainbow Trout in the Cache la Poudre River, Colorado. Radio frequency identification passive integrated transponder tags and antennas were used to track movements of wild Brown Trout and stocked Rainbow Trout in reaches where Brown Trout had or had not been removed. Multistate mark–recapture models were used to estimate tagged fish apparent survival and movement in these sections 3 months following Brown Trout removal. A cross between the German Rainbow Trout and Colorado River Rainbow Trout strains exhibited similar survival and movement probabilities in the reaches, suggesting that the presence of Brown Trout did not affect its survival or movement. However, a cross between the German Rainbow Trout and Harrison Lake Rainbow Trout exhibited less movement from the reach in which Brown Trout had been removed. Despite this, the overall short-term benefits of the removal were equivocal, suggesting that Brown Trout removal may not be beneficial for the reintroduction of Rainbow Trout. Additionally, the logistical constraints of conducting removals in large river systems are substantial and may not be a viable management option in many rivers.

  19. Otter ( Lutra lutra ) predation on stocked brown trout ( Salmo trutta ) in two Danish lowland rivers

    DEFF Research Database (Denmark)

    Jacobsen, Lene

    2005-01-01

    This study aimed to evaluate otter predation on stocked trout. Large hatchery-reared trout (16-30 cm) were stocked into two Danish rivers with different fish populations. Otter diet before and after trout stocking was determined by analysing 685 spraints, collected regularly during the 35-day study...... period. Fish composition in the rivers before stocking was assessed by electrofishing. In River Trend, a typical trout river, the proportion of trout in the otter diet increased from 8% before stocking to 33% a few days after stocking. Moreover, trout lengths in the diet changed significantly towards...... the lengths of stocked trout, indicating that newly stocked trout were preferred to wild trout. In River Skals, dominated by cyprinids, there was no change in otter diet after stocking of hatchery trout, i.e., these were ignored by otter. Otter predation should be taken into account together with fish...

  20. Variations in water temperature and implications for trout populations in the Upper Schoharie Creek and West Kill, New York, USA

    Science.gov (United States)

    George, Scott D.; Baldigo, Barry P.; Smith, Martyn J.; Mckeown, Donald M; Faulringer, Jason

    2016-01-01

    Water temperature is a key component of aquatic ecosystems because it plays a pivotal role in determining the suitability of stream and river habitat to most freshwater fish species. Continuous temperature loggers and airborne thermal infrared (TIR) remote sensing were used to assess temporal and spatial temperature patterns on the Upper Schoharie Creek and West Kill in the Catskill Mountains, New York, USA. Specific objectives were to characterize (1) contemporary thermal conditions, (2) temporal and spatial variations in stressful water temperatures, and (3) the availability of thermal refuges. In-stream loggers collected data from October 2010 to October 2012 and showed summer water temperatures exceeded the 1-day and 7-day thermal tolerance limits for trout survival at five of the seven study sites during both summers. Results of the 7 August 2012 TIR indicated there was little thermal refuge at the time of the flight. About 690,170 m2 of water surface area were mapped on the Upper Schoharie, yet only 0.009% (59 m2) was more than 1.0 °C below the median water surface temperature (BMT) at the thalweg and no areas were more than 2.0 °C BMT. On the West Kill, 79,098 m2 were mapped and 0.085% (67 m2) and 0.018% (14 m2) were BMT by 1 and 2 °C, respectively. These results indicate that summer temperatures in the majority of the study area are stressful for trout and may adversely affect growth and survival. Validation studies are needed to confirm the expectation that resident trout are in poor condition or absent from the downstream portion of the study area during warm-water periods.

  1. Low genetic variation in the salmon and trout parasite Loma salmonae (Microsporidia) supports marine transmission and clarifies species boundaries.

    Science.gov (United States)

    Brown, Amanda M V; Kent, Michael L; Adamson, Martin L

    2010-07-26

    Loma salmonae is a microsporidian parasite prevalent in wild and farmed salmon species of the genus Oncorhynchus. This study compared ribosomal RNA (rDNA) and elongation factor-1 alpha (EF-1alpha) gene sequences to look for variation that may provide a basis for distinguishing populations. Specimens were collected from laboratory, captive (sea netpen farm and freshwater hatchery) and wild populations of fish. The host range included rainbow trout O. mykiss, Pacific salmon Oncorhynchus spp. and brook trout Salvelinus fontinalis from British Columbia, Prince Edward Island, Canada, from California, Colorado, Idaho, U.S.A. and from Chile. Both loci suggested that a variant in S. fontinalis (named 'SV') was a separate species. This was supported by the absence of similar variants in the source material (isolated from laboratory-held O. tshawytscha) and high divergence (1.4 to 2.3% in the rDNA and EF-1alpha) from L. salmonae in the type host and locality (0. mykiss in California). L. salmonae from freshwater and anadromous Oncorhynchus spp. were distinguished, providing a basis on which to evaluate possible sources of infection and suggesting geographic boundaries are important. Higher genetic variation occurred among samples of freshwater origin and from a sea netpen farm in Chile, suggesting these environments may present greater population diversity. Invariance in rDNA sequence across 17 samples from anadromous salmon in rivers, lakes, ocean, farms and hatcheries supports the hypothesis that marine transmission occurs and effectively prevents population substructuring caused by freshwater transmission.

  2. Hydrography - Class A Wild Trout Streams - points

    Data.gov (United States)

    NSGIC GIS Inventory (aka Ramona) — Class A streams are streams that support a population of wild (natural reproduction) trout of sufficient size and abundance to support a long-term and rewarding...

  3. Hydrography - Class A Wild Trout Streams

    Data.gov (United States)

    NSGIC GIS Inventory (aka Ramona) — Class A streams are streams that support a population of wild (natural reproduction) trout of sufficient size and abundance to support a long-term and rewarding...

  4. Studies of the sea trout (Salmo trutta) population in river Tjoestelseroedsbaecken, a small lime-treated stream in south-west Sweden. Studier av havsoeringbestaandet i den kalkade Tjoestelseroedsbaecken. Elfisken och vattenkemi

    Energy Technology Data Exchange (ETDEWEB)

    Hoeglind, K. (Gothenburg and Bohus County Administration Board (Sweden). Environment Dept.)

    1993-01-01

    Tjoestelseroedsbaecken is one of several small streams inhabited by sea trout and affected by acidification in south-west Sweden. Roach (Rutilus rutilus) disappeared from one of the largest head water lakes already in the end of the 1950's probably as a result of acidification. In the early 1970's, electro-fishing indicated that trout reproduction failed in the upper parts of the stream. Liming in lakes was initiated in 1975, but re-acidification occurred rapidly. After additional wetland liming the water quality was stabilized from 1987 and onwards. Alkalinities below 0.1 meq/l has occurred only occasionally thereafter. In the present report the results of electro fishing between 1971 and 1992 are presented. Quantitative fishing was performed at seven stations. Two downstream locations were easily accessible by the sea trout, while before 1990 the others were accessible only during favourable conditions. In the autumn 1990 these partial migration obstacles were removed. Abundance of trout increased to normal levels after liming and with normal population fluctuations. Reproduction occurred in all parts of the stream. Trout reproduction responded successfully to the removal of migration obstacles. The outflow areas affected by salt water offered were good foraging localities for trout and probably important for growth and survival. Emigration estimate of smolts from Tjoestelseroedsbaecken gave appr. 55 ind/year or 18 ind/m[sup 2]. Mean length of returning adults was 35 cm between 1985 and 1992. 25% of these fish were >40 cm. Movements between different parts of the stream were extensive. 15 refs, 14 figs, 10 tabs

  5. Trout in the Classroom

    Science.gov (United States)

    Heath, Thomas

    2014-05-01

    Trout in the Classroom (TIC) is a conservation-oriented environmental education program for elementary, middle, and high school students. During the year each teacher tailors the program to fit his or her curricular needs. Therefore, each TIC program is unique. TIC has interdisciplinary applications in science, social studies, mathematics, language arts, fine arts, and physical education. In the program, students and teachers raise trout from fertilized eggs supplied by Virginia Department of Game and Inland Fisheries (VGIF) hatcheries, in aquariums equipped with special chillers designed to keep the water near 50 degrees F. The students make daily temperature measurements, and monitor pH, dissolved oxygen, conductivity, and ammonia levels. They record their data, plot trends, and make sure that the water quality is sufficient to support trout development. The fingerlings, which hatch in late October, are almost an inch and a half long by mid-January. And towards the end of the school year, students will release the fry into VGIF approved watersheds. TIC programs have been in place all across the country for more than 20 years, and are the result of numerous collaborations between teachers, volunteers, government agencies, and local organizations like Trout Unlimited. The programs were designed specifically for teachers who wanted to incorporate more environmental education into their curriculum. While the immediate goal of Trout in the Classroom is to increase student knowledge of water quality and cold water conservation, its long-term goal is to reconnect an increasingly urbanized population of youth to the system of streams, rivers, and watersheds that sustain them. Successful programs have helped: connect students to their local environments and their local watersheds; teach about watershed health and water quality, and; get students to care about fish and the environment. In Virginia, the TIC program is now in its 8th year. Over the past year, the program

  6. Status of Oregon's Bull Trout.

    Energy Technology Data Exchange (ETDEWEB)

    Buchanan, David V.; Hanson, Mary L.; Hooton, Robert M.

    1997-10-01

    Limited historical references indicate that bull trout Salvelinus confluentus in Oregon were once widely spread throughout at least 12 basins in the Klamath River and Columbia River systems. No bull trout have been observed in Oregon's coastal systems. A total of 69 bull trout populations in 12 basins are currently identified in Oregon. A comparison of the 1991 bull trout status (Ratliff and Howell 1992) to the revised 1996 status found that 7 populations were newly discovered and 1 population showed a positive or upgraded status while 22 populations showed a negative or downgraded status. The general downgrading of 32% of Oregon's bull trout populations appears largely due to increased survey efforts and increased survey accuracy rather than reduced numbers or distribution. However, three populations in the upper Klamath Basin, two in the Walla Walla Basin, and one in the Willamette Basin showed decreases in estimated population abundance or distribution.

  7. Microsatellite analyses of the trout of northwest Mexico

    Science.gov (United States)

    Nielsen, J.L.; Sage, G.K.

    2001-01-01

    The trout of northwest Mexico represent an undescribed group of fish considered part of the Oncorhynchus mykiss (Pacific trout) complex of species and subspecies. Recent genetic studies have shown these fish to have important genetic diversity and a unique evolutionary history when compared to coastal rainbow trout. Increased levels of allelic diversity have been found in this species at the southern extent of its range. In this study we describe the trout in the Sierra Madre Occidental from the rios Yaqui, Mayo, Casas Grandes and de Bavispe, and their relationship to the more southern distribution of Mexican golden trout (O. chrysogaster) using 11 microsatellite loci. Microsatellite allelic diversity in Mexican trout was high with a mean of 6.6 alleles/locus, average heterozygosity = 0.35, and a mean Fst = 0.43 for all loci combined. Microsatellite data were congruent with previously published mtDNA results showing unique panmictic population structure in the Rio Yaqui trout that differs from Pacific coastal trout and Mexican golden trout. These data also add support for the theory of headwaters transfer of trout across the Continental Divide from tributaries of the Rio de Bavispe into the Rio Casas Grandes. Rio Mayo trout share a close genetic relationship to trout in Rio Yaqui, but sample sizes from the Rio Mayo prevent significant comparisons in this study. Microsatellite analyses show significant allelic frequency differences between Rio Yaqui trout and O. chrysogaster in Sinaloa and Durango Mexico, adding further support for a unique evolutionary status for this group of northwestern Mexican trout.

  8. Morphometric and molecular characterization of Gyrodactylus teuchis Lautraite, Blanc, Thiery, Daniel & Vigneulle, 1999 (Monogenea: Gyrodactylidae) from an Austrian brown trout population.

    Science.gov (United States)

    Hahn, Christoph; Bakke, Tor A; Bachmann, Lutz; Weiss, Steven; Harris, Phil D

    2011-12-01

    Gyrodactylus teuchis is a widespread parasite of wild and farmed salmonids throughout Europe. It has been frequently confused with the notifiable pathogen G. salaris, to which it bears a striking morphological similarity. The species is frequently referred to as 'cryptic', and diagnoses are primarily based on molecular evidence. We provide the first comprehensive re-description of G. teuchis from a natural wild brown trout population in the Danube watershed, based on the state of the art morphometrics in addition to standard molecular markers. We demonstrate that despite the lack of uni-variate diagnostic character measurements, G. teuchis can be reliably distinguished from G. salaris using multivariate morphological approaches such as Principal Component Analysis or Canonical Variate Analysis, suggesting that automated diagnostic approaches for G. salaris can be modified to take account of potential G. teuchis in samples. This is the first record of G. teuchis from a host population unlikely to have been modified by human stocking efforts. The morphological variability observed in the samples collected from one site on 1 day reflects the overall level of variation reported for European G. teuchis. We also report new sequence variants of the internal transcribed spacer (ITS-1) of the nuclear ribosomal gene cluster with evidence for intra-individual heterogeneity of ITS-1 within this population of G. teuchis.

  9. Bacterial lipopolysaccharide induces apoptosis in the trout ovary

    Directory of Open Access Journals (Sweden)

    Krasnov Aleksei

    2006-08-01

    Full Text Available Abstract Background In mammals it is well known that infections can lead to alterations in reproductive function. As part of the innate immune response, a number of cytokines and other immune factors is produced during bacterial infection or after treatment with lipopolysaccharide (LPS and acts on the reproductive system. In fish, LPS can also induce an innate immune response but little is known about the activation of the immune system by LPS on reproduction in fish. Therefore, we conducted studies to examine the in vivo and in vitro effects of lipopolysaccharide (LPS on the reproductive function of sexually mature female trout. Methods In saline- and LPS -injected brook trout, we measured the concentration of plasma steroids as well as the in vitro steroidogenic response (testosterone and 17alpha-hydroxyprogesterone of ovarian follicles to luteinizing hormone (LH, the ability of 17alpha,20beta-dihydroxy-4-pregnen-3-one to induce germinal vesicle breakdown (GVBD in vitro, and that of epinephrine to stimulate follicular contraction in vitro. We also examined the direct effects of LPS in vitro on steroid production, GVBD and contraction in brook trout ovarian follicles. The incidence of apoptosis was evaluated by TUNEL analysis. Furthermore, we examined the gene expression pattern in the ovary of saline- and LPS-injected rainbow trout by microarray analysis. Results LPS treatment in vivo did not affect plasma testosterone concentration or the basal in vitro production of steroids, although a small but significant potentiation of the effects of LH on testosterone production in vitro was observed in ovarian follicles from LPS-treated fish. In addition, LPS increased the plasma concentration of cortisol. LPS treatment in vitro did not affect the basal or LH-stimulated steroid production in brook trout ovarian follicles. In addition, we did not observe any effects of LPS in vivo or in vitro on GVBD or follicular contraction. Therefore, LPS did not

  10. Effects on the trout and the evertebrate population in the stream Vulluelva during the first year following mass mortality by oil spill; Effekter paa oerret og bunndyr i Vulluelva foerste aaret etter et massivt oljeutslipp

    Energy Technology Data Exchange (ETDEWEB)

    Lund, R.A.; Noest, T.; Finstad, B.

    1996-12-31

    Following the crash of a tanker truck in the autumn of 1994, 27000 litres of petrol, paraffin and diesel oil accidentally spilt into the river Vulluelva, Norway. This report discusses the observed biological effects of the spill. The spill immediately killed the entire brown trout parr population in the lower half of the stream and 30% of the sea trout spawning population. A few weeks later, after extensive clean-up and of heavy flood, significant numbers of trout spawned within a limited river stretch in the lowest part of the stream and not in the normally more favoured spawning habitats further upstream. Analyses of the chloride content of blood plasma of parr and spawners sampled at the final phase of the spawning period showed only a few cases of stressed physiological condition. The significant variation in the observed egg survival in the river stretch preferred for spawning may be related to possible negative impacts by hydrocarbons. The study demonstrates no negative impacts on fry growth during the first season following the contamination. Mass mortality of the zoobenthos followed the oil spill in October 1994 and the populations of the dominating groups were reduced to a very low level. The recovery of zoobenthos was not complete until 9-10 months later. 62 refs., 8 figs., 11 tabs.

  11. Spawning and rearing behavior of bull trout in a headwaterlake ecosystem

    Science.gov (United States)

    Lora B. Tennant,; Gresswell, Bob; Guy, Christopher S.; Michael H. Meeuwig,

    2015-01-01

    Numerous life histories have been documented for bull trout Salvelinus confluentus. Lacustrine-adfluvial bull trout populations that occupy small, headwater lake ecosystems and migrate short distances to natal tributaries to spawn are likely common; however, much of the research on potamodromous bull trout has focused on describing the spawning and rearing characteristics of bull trout populations that occupy large rivers and lakes and make long distance spawning migrations to natal headwater streams. This study describes the spawning and rearing characteristics of lacustrine-adfluvial bull trout in the Quartz Lake drainage, Glacier National Park, USA, a small headwater lake ecosystem. Many spawning and rearing characteristics of bull trout in the Quartz Lake drainage are similar to potamodromous bull trout that migrate long distances. For example, subadult bull trout distribution was positively associated with slow-water habitat unit types and maximum wetted width, and negatively associated with increased stream gradient. Bull trout spawning also occurred when water temperatures were between 5 and 9 °C, and redds were generally located in stream segments with low stream gradient and abundant gravel and cobble substrates. However, this study also elucidated characteristics of bull trout biology that are not well documented in the literature, but may be relatively widespread and have important implications regarding general characteristics of bull trout ecology, use of available habitat by bull trout, and persistence of lacustrine-adfluvial bull trout in small headwater lake ecosystems.

  12. Effect of stocking sub-yearling Atlantic salmon on the habitat use of sub-yearling rainbow trout

    Science.gov (United States)

    Johnson, James H.

    2016-01-01

    Atlantic salmon (Salmo salar) restoration in the Lake Ontario watershed may depend on the species' ability to compete with naturalized non-native salmonids, including rainbow trout (Oncorhynchus mykiss) in Lake Ontario tributaries. This study examined interspecific habitat associations between sub-yearling Atlantic salmon and rainbow trout as well as the effect of salmon stocking on trout habitat in two streams in the Lake Ontario watershed. In sympatry, Atlantic salmon occupied significantly faster velocities and deeper areas than rainbow trout. However, when examining the habitat use of rainbow trout at all allopatric and sympatric sites in both streams, trout habitat use was more diverse at the sympatric sites with an orientation for increased cover and larger substrate. In Grout Brook, where available habitat remained constant, there was evidence suggesting that trout may have shifted to slower and shallower water in the presence of salmon. The ability of sub-yearling Atlantic salmon to affect a habitat shift in rainbow trout may be due to their larger body size and/or larger pectoral fin size. Future studies examining competitive interactions between these species during their first year of stream residence should consider the size advantage that earlier emerging Atlantic salmon will have over rainbow trout.

  13. 36 CFR 13.1226 - Brooks Falls area.

    Science.gov (United States)

    2010-07-01

    ... 36 Parks, Forests, and Public Property 1 2010-07-01 2010-07-01 false Brooks Falls area. 13.1226... Developed Area § 13.1226 Brooks Falls area. The area within 50 yards of the ordinary high water marks of the Brooks River from the Riffles Bear Viewing Platform to a point 100 yards above Brooks Falls is closed...

  14. Monitor and Protect Wigwam River Bull Trout for Koocanusa Reservoir : Summary of the Skookumchuck Creek Bull Trout Enumeration Project, Annual Report 2000.

    Energy Technology Data Exchange (ETDEWEB)

    Baxter, James S.; Baxter, Jeremy

    2001-02-01

    An enumeration fence and traps were installed on Skookumchuck Creek from September 7 th to October 16 th to enable the capture of post-spawning bull trout emigrating out of the watershed. During the study period, a total of 252 bull trout were sampled through the enumeration fence. Length, weight, and sex were determined for all but one of the 252 bull trout captured. In total, one fish of undetermined sex, 63 males and 188 females were processed through the fence. A total of 67 bull trout were observed on a snorkel survey prior to the fence being removed on October 16 th . Coupled with the fence count, the total bull trout count during this project was 319 fish. Several other species of fish were captured at the enumeration fence including westslope cutthroat trout, Rocky Mountain whitefish, kokanee, sucker, and Eastern brook trout. Redds were observed during ground surveys in three different locations (river km 27.5- 28.5, km 29-30, and km 24-25). The largest concentration of redds were noted in the upper two sections which have served as the index sections over the past four years. A total of 197 bull trout redds were enumerated on the ground on October 4 th . The majority of redds (n=189) were observed in the 3.0 km index section (river km 27.5-30.5) that has been surveyed over the past four years. The additional 8 redds were observed in a 1.5 km section (river km 24.0-25.5). Summary plots of water temperature for Bradford Creek, Sandown Creek, Skookumchuck Creek at km 39.5, and Skookumchuck Creek at the fence site suggested that water temperatures were within the range preferred by bull trout for spawning, egg incubation, and rearing.

  15. ANALYSE DE LA VARIABILITÉ DE LA CROISSANCE D'UNE POPULATION DE TRUITE COMMUNE (SALMO TRUTTA L. DANS UN TORRENT PYRÉNÉEN. GROWTH VARIABILITY ANALYSIS OF A BROWN TROUT (SALMO TRUTTA L. POPULATION IN A PYRENEAN MOUNTAIN STREAM.

    Directory of Open Access Journals (Sweden)

    LAGARRIGUE T.

    2008-05-01

    discuté. The brown trout population of the Neste d'Oueil, a Pyrenean tributary of the Garonne river, was studied between July 1996 and March 1999. During the period of two years and nine months, nine sampling experiments were carried out in February-March, July and September on two sectors of the river. Thus, we could follow the seasonal variation of growth, total density and total biomass of brown trout. Moreover, 652 brown trouts of age ranging between 1+ and 6+ years, for sizes ranging between 100 and 290 mm, were marked individually by visible implants in March 1998. The recapture rates observed varied from 19.5 to 74%, following the season considered. Growth rates showed a strong seasonal variability, validated by individual tagging experiments. Because of reproduction and rigorous temperatures experienced by trout during autumn and winter, growth rates observed were almost null and individuals >1+ lost weight during this period. In spite of theoretically non-optimal thermal conditions, growth occurred almost exclusively in spring. Poor growth rates observed during summer are not due to thermal factor which was theoretically optimal for growth in this season and could be attributed to the sexual maturation, to the saturation of the carrying capacity of physical habitat and to the strong intraspecific competition caused by i likely arrivals of 1+ and 2+ individuals emigrating from tributaries and ii reduction in "quantity and quality" of physical habitat at low-flow limiting accessibility and availability of energetically profitable prey. The role of growth in the dynamics of the brown trout population of the Neste d'Oueil River is discussed.

  16. 2012 USGS Lidar: Brooks Camp (AK)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The U.S. Geological Survey (USGS) had a requirement for high resolution Lidar needed for mapping the Brooks Camp region of Katmai National Park in Alaska....

  17. Katherine Brooke'ist / Tiina Lepiste

    Index Scriptorium Estoniae

    Lepiste, Tiina

    2007-01-01

    Ameerika teleseriaali "Vaprad ja ilusad" ("The Bold and the Beautiful") osatäitja Katherine Kelly Lang (Brooke). Artikli aluseks on Soap Opera Weekly ajakirjaniku Linda Susmani vestlus näitlejannaga

  18. Katherine Brooke'ist / Tiina Lepiste

    Index Scriptorium Estoniae

    Lepiste, Tiina

    2007-01-01

    Ameerika teleseriaali "Vaprad ja ilusad" ("The Bold and the Beautiful") osatäitja Katherine Kelly Lang (Brooke). Artikli aluseks on Soap Opera Weekly ajakirjaniku Linda Susmani vestlus näitlejannaga

  19. Genetics Home Reference: Brooke-Spiegler syndrome

    Science.gov (United States)

    ... gene (CYLD) mutations in Brooke-Spiegler syndrome: novel insights into the role of deubiquitination in cell signaling. ... healthcare professional . About Genetics Home Reference Site Map Customer Support Selection Criteria for Links USA.gov Copyright ...

  20. Suppression of invasive lake trout in an isolated backcountry lake in Glacier National Park

    Science.gov (United States)

    Fredenberg, C. R.; Muhlfeld, Clint C.; Guy, Christopher S.; D'Angelo, Vincent S.; Downs, Christopher C.; Syslo, John M.

    2017-01-01

    Fisheries managers have implemented suppression programmes to control non-native lake trout, Salvelinus namaycush (Walbaum), in several lakes throughout the western United States. This study determined the feasibility of experimentally suppressing lake trout using gillnets in an isolated backcountry lake in Glacier National Park, Montana, USA, for the conservation of threatened bull trout, Salvelinus confluentus (Suckley). The demographics of the lake trout population during suppression (2009–2013) were described, and those data were used to assess the effects of suppression scenarios on population growth rate (λ) using an age-structured population model. Model simulations indicated that the population was growing exponentially (λ = 1.23, 95% CI: 1.16–1.28) prior to suppression. However, suppression resulted in declining λ(0.61–0.79) for lake trout, which was concomitant with stable bull trout adult abundances. Continued suppression at or above observed exploitation levels is needed to ensure continued population declines.

  1. Study of Meat Physical-Chemical Composition of Three Trout Breeds Farmed in Salmonid Exploitations from Moldova

    Directory of Open Access Journals (Sweden)

    Cătălin Emilian NISTOR

    2014-11-01

    Full Text Available For all trout breeds, especially regarding brown trout, data from local and foreign literature consulted are less conclusive and sometimes controversial in terms of physical-chemical composition of trout meat, so our research represents a first for Romanian literature and aims to bring new information to enrich it.Our research aimed to evaluate the physical-chemical composition of the meat gathered from brook, rainbow and brown trout breed, by analyzing 50 individuals, 10 individuals in each batch (F1, F2, C1 C2 and I1, from two trout farms from Moldova, being determine the pH of meat, dry matter, content in proteins, lipids, ash and water/protein ratio for all three trout breeds. The obtained values for pH at warm ranged between 6.91 at batch F1, and 7.09 for batch I1. As regarding the pH at cold, this one had and descendant evolution ranging between: 6.78 for trout from batch F1 respectively a value of 6.88 for individuals from batch I1. The obtained values were between 23.95 and 27.12 for dry matter. Content in proteins recorded the best values (19.21% at individuals from batch F2, and content in lipids oscillated between 4.14% and 5.62%. The obtained values regarding physical-chemical composition highlighted that all trout breeds have a good nutritional value.

  2. Assembling a dual purpose TaqMan-based panel of single-nucleotide polymorphism markers in rainbow trout and steelhead (Oncorhynchus mykiss) for association mapping and population genetics analysis

    DEFF Research Database (Denmark)

    Hansen, Mette H H; Young, Sewall; Jørgensen, Hanne Birgitte Hede;

    2011-01-01

    We establish a TaqMan-based assay panel for genotyping single-nucleotide polymorphisms in rainbow trout and steelhead (Oncorhynchus mykiss). We develop 22 novel single-nucleotide polymorphism markers based on new steelhead sequence data and on assays from sister taxa. Additionally, we adapt 154...... previously developed markers to the TaqMan platform. At the beginning of this study, 59 SNPs with TaqMan assays were available to the scientific community. By adding 176 additional TaqMan assays to this number, we greatly expand the biological applications of TaqMan genotyping within both population genetics...... and quantitative genetics...

  3. Genome-wide association studies reveal similar genetic architecture with shared and unique QTL for Bacterial Cold Water Disease resistance in two rainbow trout (Oncorhynchus mykiss) breeding populations

    Science.gov (United States)

    Bacterial cold water disease (BCWD) causes significant mortality and economic losses in salmonid aquaculture. In previous studies, we identified moderate-large effect QTL for BCWD resistance in rainbow trout (Oncorhynchus mykiss). However, the recent availability of a 57K SNP array and a genome phys...

  4. Kootenai River Fisheries Investigations; Rainbow and Bull Trout Recruitment, 2002-2003 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Walters, Jody P.

    2004-01-01

    Rainbow trout Oncorhynchus mykiss provide the most important sport fishery in the Kootenai River, Idaho, but densities and catch rates are low. Low recruitment is one possible factor limiting the rainbow trout population. Bull trout Salvelinus confluentus also exist in the Kootenai River, but little is known about this population. Research reported here addresses the following objectives for the Kootenai River, Idaho: increase rainbow trout recruitment, identify rainbow and bull trout spawning tributaries and migration timing, establish baseline data on bull trout redd numbers in tributaries, and improve the rainbow trout population size structure. Six adult rainbow trout were moved to spawning habitat upstream of a potential migration barrier on Caboose Creek, but numbers of redds and age-0 out-migrants did not appear to increase relative to a reference stream. Measurements taken on the Moyie River indicated the gradient is inadequate to deliver suitable flows to a proposed rainbow trout spawning channel. Summer water temperatures measured in the Deep Creek drainage sometimes exceeded 24 C, higher than those reported as suitable for rainbow trout. Radio-tagged rainbow trout were located in Boulder Creek during the spring spawning season, and bull trout were located in the Moyie River and O'Brien Creek, Montana in the fall. Bull trout spawning migration timing was related to increases in Kootenai River flows. Bull trout redd surveys documented 19 redds on Boulder Creek and North and South Callahan creeks. Fall 2002 electrofishing showed that the Kootenai River rainbow trout proportional stock density was 54, higher than prior years when more liberal fishing regulations were in effect. Boulder Creek produces the highest number of age-0 rainbow trout out-migrants upstream of Bonners Ferry, but the survival rate of these out-migrants upon reaching the Kootenai River is unknown. Determining juvenile survival rates and sources of mortality could aid management

  5. Reevaluation of lake trout and lake whitefish bioenergetics models

    Science.gov (United States)

    Madenjian, Charles P.; Pothoven, Steve A.; Kao, Yu-Chun

    2013-01-01

    Using a corrected algorithm for balancing the energy budget, we reevaluated the Wisconsin bioenergetics model for lake trout (Salvelinus namaycush) in the laboratory and for lake whitefish (Coregonus clupeaformis) in the laboratory and in the field. For lake trout, results showed that the bioenergetics model slightly overestimated food consumption by the lake trout when they were fed low and intermediate rations, whereas the model predicted food consumption by lake trout fed ad libitum without any detectable bias. The slight bias in model predictions for lake trout on restricted rations may have been an artifact of the feeding schedule for these fish, and we would therefore recommend application of the Wisconsin lake trout bioenergetics model to lake trout populations in the field without any revisions to the model. Use of the Wisconsin bioenergetics model for coregonids resulted in overestimation of food consumption by lake whitefish both in the laboratory and in the field by between 20 and 30%, on average. This overestimation of food consumption was most likely due to overestimation of respiration rate. We therefore adjusted the respiration component of the bioenergetics model to obtain a good fit to the observed consumption in our laboratory tanks. The adjusted model predicted the consumption in the laboratory and the field without any detectable bias. Until a detailed lake whitefish respiration study can be conducted, we recommend application of our adjusted version of the Wisconsin generalized coregonid bioenergetics model to lake whitefish populations in the field.

  6. Trout Stream Special Regulations

    Data.gov (United States)

    Minnesota Department of Natural Resources — This layer shows Minnesota trout streams that have a special regulation as described in the 2006 Minnesota Fishing Regulations. Road crossings were determined using...

  7. Investigations of Bull Trout (Salvelinus Confluentus), Steelhead Trout (Oncorhynchus Mykiss), and Spring Chinook Salmon (O. Tshawytscha) Interactions in Southeast Washington Streams : 1991 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Martin, Steven W.

    1992-07-01

    Bull trout (Salvelinus confluentus) are native to many tributaries of the Snake River in southeast Washington. The Washington Department of Wildlife (WDW) and the American Fisheries Society (AFS) have identified bull trout as a species of special concern which means that they may become threatened or endangered by relatively, minor disturbances to their habitat. Steelhead trout/rainbow trout (Oncorhynchus mykiss) and spring chinook salmon (O.tshawytscha) are also native to several tributaries of the Snake river in southeast Washington. These species of migratory fishes are depressed, partially due to the construction of several dams on the lower Snake river. In response to decreased run size, large hatchery program were initiated to produce juvenile steelhead and salmon to supplement repressed tributary stocks, a practice known as supplementation. There is a concern that supplementing streams with artificially high numbers of steelhead and salmon may have an impact on resident bull trout in these streams. Historically, these three species of fish existed together in large numbers, however, the amount of high-quality habitat necessary for reproduction and rearing has been severely reduced in recent years, as compared to historic amounts. The findings of the first year of a two year study aimed at identifying species interactions in southeast Washington streams are presented in this report. Data was collected to assess population dynamics; habitat utilization and preference, feeding habits, fish movement and migration, age, condition, growth, and the spawning requirements of bull trout in each of four streams. A comparison of the indices was then made between the study streams to determine if bull trout differ in the presence of the putative competitor species. Bull trout populations were highest in the Tucannon River (supplemented stream), followed by Mill Creek (unsupplemented stream). Young of the year bull trout utilized riffle and cascade habitat the most in all

  8. Peter Brook y el pensamiento tradicional

    OpenAIRE

    Nicolescu, Basarab

    2014-01-01

    La trayectoria creativa de Peter Brook tiene su fuente en la investigación sobre la tradición. En este ensayo se hace un recorrido por su concepción teatral y se revisan los diversos sentidos del concepto “tradición”. Desde la perspectiva transdiciplinaria se analizan los componentes centrales del teatro de Brook: energía, movimiento e interrelación, así como la estructura ternaria del espacio, la relación entre determinismo y espontaneidad y la imposibilidad de un lenguaje universal. El pens...

  9. Physical, biotic, and sampling influences on diel habitat use by stream-dwelling bull trout

    Science.gov (United States)

    Banish, N.P.; Peterson, J.T.; Thurow, R.F.

    2008-01-01

    We used daytime and nighttime underwater observation to assess microhabitat use by bull trout Salvelinus confluentus (N = 213) in streams of the intermountain western USA during the summers of 2001 and 2002. We recorded fish focal points and measured a set of habitat characteristics as well as habitat availability via line transects. Bull trout were benthic and solitary; most (88%) were observed at night. We developed a conditional logistic regression model to account for the effect of fish movement in response to snorkeling, and we fitted 18 candidate models to evaluate the relative influences of biotic and abiotic factors on habitat use. The candidate models were also fitted with a naive logistic regression (i.e., no movement) to evaluate the effects of movement on inferences of microhabitat use. The most plausible model describing bull trout habitat use was the same for the conditional and nai??ve regressions and included depth, velocity, percent rubble substratum, and the day X depth, body size X depth, and body size X day X depth interactions. The presence of brook trout S. fontinalis and the abundance of conspecifics did not strongly influence microhabitat use by bull trout. The relative rankings of the remaining models differed substantially between the conditional and nai??ve models. Relative to the conditional models, the naive models overestimated the importance of diurnal differences in habitat use and overestimated the use of deepwater habitats, particularly during the day. Both model types suggested that all sizes of bull trout were generally found in deeper, low-velocity habitat at night, whereas small bull trout (70-90 mm total length) were found in shallower habitats during the day. We recommend lhat biologists account for fish movement in response to sampling to avoid biasing modeled habitat use patterns by bull trout. ?? Copyright by the American Fisheries Society 2008.

  10. Investigations of Bull Trout (Salvelinus Confluentus), Steelhead Trout (Oncorhynchus Mykiss), and Spring Chinook Salmon (O. Tshawytscha) Interactions in Southeast Washington Streams. Final Report 1992.

    Energy Technology Data Exchange (ETDEWEB)

    Underwood, Keith D.

    1995-01-01

    The goal of this two year study was to determine if supplementation with hatchery reared steelhead trout (Oncorhynchus mykiss) and spring chinook salmon (O. tshawytscha) negatively impacted wild native bull trout (Salvelinus confluentus) through competitive interactions. Four streams with varying levels of fish supplementation activity were sampled in Southeast Washington. Tasks performed during this study were population density, relative abundance, microhabitat utilization, habitat availability, diet analysis, bull trout spawning ground surveys, radio telemetry of adult bull trout, and growth analysis. Results indicate that bull trout overlapped geographically with the supplemented species in each of the study streams suggesting competition among species was possible. Within a stream, bull trout and the supplemented species utilized dissimilar microhabitats and microhabitat utilization by each species was the same among streams suggesting that there was no shifts in microhabitat utilization among streams. The diet of bull trout and O. mykiss significantly overlapped in each of the study streams. The stream most intensely supplemented contained bull trout with the slowest growth and the non-supplemented stream contained bull trout with the fastest growth. Conversely, the stream most intensely supplemented contain steelhead with the fastest growth and the non-supplemented stream contained steelhead with the slowest growth. Growth indicated that bull trout may have been negatively impacted from supplementation, although other factors may have contributed. At current population levels, and current habitat quantity and quality, no impacts to bull trout as a result of supplementation with hatchery reared steelhead trout and spring chinook salmon were detected. Project limitations and future research recommendations are discussed.

  11. Factors influencing the distribution of native bull trout and westslope cutthroat trout in western Glacier National Park, Montana

    Science.gov (United States)

    D'Angelo, Vincent S.; Muhlfeld, Clint C.

    2013-01-01

    The widespread declines of native bull trout (Salvelinus confluentus) and westslope cutthroat trout (Oncorhynchus clarkii lewisi) populations prompted researchers to investigate factors influencing their distribution and status in western Glacier National Park, Montana. We evaluated the association of a suite of abiotic factors (stream width, elevation, gradient, large woody debris density, pool density, August mean stream temperature, reach surface area) with the occurrence (presence or absence) of bull trout and westslope cutthroat trout in 79 stream reaches in five sub-drainages containing glacial lakes. We modeled the occurrence of each species using logistic regression and evaluated competing models using an information theoretic approach. Westslope cutthroat trout were widely distributed (47 of 79 reaches), and there appeared to be no restrictions on their distribution other than physical barriers. Westslope cutthroat trout were most commonly found in relatively warm reaches downstream of lakes and in headwater reaches with large amounts of large woody debris and abundant pools. By contrast, bull trout were infrequently detected (10 of 79 reaches), with 7 of the 10 (70%) detections in sub-drainages that have not been compromised by non-native lake trout (S. namaycush). Bull trout were most often found in cold, low-gradient reaches upstream of glacial lakes. Our results indicate that complex stream habitats in sub-drainages free of non-native species are important to the persistence of native salmonids in western Glacier National Park. Results from this study may help managers monitor and protect important habitats and populations, inform conservation and recovery programs, and guide non-native species suppression efforts in Glacier National Park and elsewhere.

  12. Lake trout rehabilitation in Lake Erie: a case history

    Science.gov (United States)

    Cornelius, Floyd C.; Muth, Kenneth M.; Kenyon, Roger

    1995-01-01

    Native lake trout (Salvelinus namaycush) once thrived in the deep waters of eastern Lake Erie. The impact of nearly 70 years of unregulated exploitation and over 100 years of progressively severe cultural eutrophication resulted in the elimination of lake trout stocks by 1950. Early attempts to restore lake trout by stocking were unsuccessful in establishing a self-sustaining population. In the early 1980s, New York's Department of Environmental Conservation, Pennsylvania's Fish and Boat Commission, and the U.S. Fish and Wildlife Service entered into a cooperative program to rehabilitate lake trout in the eastern basin of Lake Erie. After 11 years of stocking selected strains of lake trout in U.S. waters, followed by effective sea lamprey control, lake trout appear to be successfully recolonizing their native habitat. Adult stocks have built up significantly and are expanding their range in the lake. Preliminary investigations suggest that lake trout reproductive habitat is still adequate for natural reproduction, but natural recruitment has not been documented. Future assessments will be directed toward evaluation of spawning success and tracking age-class cohorts as they move through the fishery.

  13. Short-and long term niche segregation and individual specialization of brown trout (Salmo trutta) in species poor Faroese lakes

    DEFF Research Database (Denmark)

    Brodersen, Jakob; Malmquist, Hilmar J.; Landkildehus, Frank

    2012-01-01

    by comparing relative abundance, stable isotope ratios and diet in multiple habitats. In the presence of three-spined sticklebacks (Gasterosteus aculeatus), a higher proportion of the trout population was found in the pelagic habitat, and trout in general relied on a more pelagic diet base as compared to trout...... living in allopatry or in sympatry with Arctic charr (Salvelinus alpinus). Diet analyses revealed, however, that niche-segregation may be more complex than described on a one-dimensional pelagic-littoral axis. Trout from both littoral and offshore benthic habitats had in the presence of sticklebacks...... a less benthic diet as compared to trout living in allopatry or in sympatry with charr. Furthermore, we found individual habitat specialization between littoral/benthic and pelagic trout in deep lakes. Hence, our findings indicate that for trout populations interspecific competition can drive shifts...

  14. Microsatellite and mitochondrial DNA polymorphism reveals life history dependent interbreeding between hatchery and wild brown trout ( Salmo trutta L.)

    DEFF Research Database (Denmark)

    Hansen, Michael Møller; Ruzzante, D.E.; Eg Nielsen, Einar

    2000-01-01

    The effects of stocking hatchery trout into wild populations were studied in a Danish river, using microsatellite and mitochondrial DNA (mtDNA) markers. Baseline samples were taken from hatchery trout and wild trout assumed to be unaffected by previous stocking. Also, samples were taken from...... resident and sea trout from a stocked section of the river. Genetic differentiation between the hatchery strain and the local wild population was modest (microsatellite F-ST = 0.06). Using assignment tests, more than 90% of individuals from the baseline samples were classified correctly. Assignment tests...... to the hatchery strain suggested that interbreeding took place between hatchery and wild trout. The latter result also indicated that male hatchery trout contributed more to interbreeding than females. We suggest that stronger selection acts against stocked hatchery trout that become anadromous compared...

  15. Distribution and Movement of Bull Trout in the Upper Jarbidge River Watershed, Nevada

    Science.gov (United States)

    Allen, M. Brady; Connolly, Patrick J.; Mesa, Matthew G.; Charrier, Jodi; Dixon, Chris

    2010-01-01

    In 2006 and 2007, we surveyed the occurrence of bull trout (Salvelinus confluentus), the relative distributions of bull trout and redband trout (Oncorhynchus mykiss), and stream habitat conditions in the East and West Forks of the Jarbidge River in northeastern Nevada and southern Idaho. We installed passive integrated transponder (PIT) tag interrogation systems at strategic locations within the watershed, and PIT-tagged bull trout were monitored to evaluate individual fish growth, movement, and the connectivity of bull trout between streams. Robust bull trout populations were found in the upper portions of the East Fork Jarbidge River, the West Fork Jarbidge River, and in the Pine, Jack, Dave, and Fall Creeks. Small numbers of bull trout also were found in Slide and Cougar Creeks. Bull trout were numerically dominant in the upper portions of the East Fork Jarbidge River, and in Fall, Dave, Jack, and Pine Creeks, whereas redband trout were numerically dominant throughout the rest of the watershed. The relative abundance of bull trout was notably higher at altitudes above 2,100 m. This study was successful in documenting bull trout population connectivity within the West Fork Jarbidge River, particularly between West Fork Jarbidge River and Pine Creek. Downstream movement of bull trout to the confluence of the East Fork and West Fork Jarbidge River both from Jack Creek (rkm 16.6) in the West Fork Jarbidge River and from Dave Creek (rkm 7.5) in the East Fork Jarbidge River was detected. Although bull trout exhibited some downstream movement during the spring and summer, much of their emigration occurred in the autumn, concurrent with decreasing water temperatures and slightly increasing flows. The bull trout that emigrated were mostly age-2 or older, but some age-1 fish also emigrated. Upstream movement by bull trout was detected less than downstream movement. The overall mean annual growth rate of bull trout in the East Fork and West Fork Jarbidge River was 36 mm

  16. Kootenai River Fisheries Investigations; Rainbow and Bull Trout Recruitment, 1999 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Walters, Jody P.; Downs, Christopher C.

    2001-08-01

    Our 1999 objectives were to determine sources of rainbow trout Oncorhynchus mykiss and bull trout Salvelinus confluentus spawning and recruitment in the Idaho reach of the Kootenai River. We used a rotary-screw trap to capture juvenile trout to determine age at out-migration and to estimate total out-migration from the Boundary Creek drainage to the Kootenai River. The out-migrant estimate for March through August 1999 was 1,574 (95% C. I. = 825-3,283) juvenile rainbow trout. Most juveniles out-migrated at age-2 and age-3. No out-migrating bull trout were caught. Five of 17 rainbow trout radio-tagged in Idaho migrated upstream into Montana waters during the spawning season. Five bull trout originally radio-tagged in O'Brien Creek, Montana in early October moved downstream into Idaho and British Columbia by mid-October. Annual angler exploitation for the rainbow trout population upstream of Bonners Ferry, Idaho was estimated to be 58%. Multi-pass depletion estimates for index reaches of Caboose, Curley, and Debt creeks showed 0.20, 0.01, and 0.13 rainbow trout juveniles/m{sup 2}, respectively. We estimated rainbow trout (180-415 mm TL) standing stock of 1.6 kg/ha for the Hemlock Bar reach (29.4 ha) of the Kootenai River, similar to the 1998 estimate. Recruitment of juvenile rainbow and bull trout from Idaho tributaries is not sufficient to be the sole source of subsequent older fish in the mainstem Kootenai River. These populations are at least partly dependent on recruitment from Montana waters. The low recruitment and high exploitation rate may be indicators of a rainbow trout population in danger of further decline.

  17. Flow regime, temperature, and biotic interactions drive differential declines of trout species under climate change

    Science.gov (United States)

    Wenger, S.J.; Isaak, D.J.; Luce, C.H.; Neville, H.M.; Fausch, K.D.; Dunham, J.B.; Dauwalter, D.C.; Young, M.K.; Elsner, M.M.; Rieman, B.E.; Hamlet, A.F.; Williams, J.E.

    2011-01-01

    Broad-scale studies of climate change effects on freshwater species have focused mainly on temperature, ignoring critical drivers such as flow regime and biotic interactions. We use downscaled outputs from general circulation models coupled with a hydrologic model to forecast the effects of altered flows and increased temperatures on four interacting species of trout across the interior western United States (1.01 million km2), based on empirical statistical models built from fish surveys at 9,890 sites. Projections under the 2080s A1B emissions scenario forecast a mean 47% decline in total suitable habitat for all trout, a group of fishes of major socioeconomic and ecological significance. We project that native cutthroat trout Oncorhynchus clarkii, already excluded from much of its potential range by nonnative species, will lose a further 58% of habitat due to an increase in temperatures beyond the species' physiological optima and continued negative biotic interactions. Habitat for nonnative brook trout Salvelinus fontinalis and brown trout Salmo trutta is predicted to decline by 77% and 48%, respectively, driven by increases in temperature and winter flood frequency caused by warmer, rainier winters. Habitat for rainbow trout, Oncorhynchus mykiss, is projected to decline the least (35%) because negative temperature effects are partly offset by flow regime shifts that benefit the species. These results illustrate how drivers other than temperature influence species response to climate change. Despite some uncertainty, large declines in trout habitat are likely, but our findings point to opportunities for strategic targeting of mitigation efforts to appropriate stressors and locations.

  18. Wild Estonian and Russian sea trout (Salmo trutta) in Finnish coastal sea trout catches: results of genetic mixed-stock analysis.

    Science.gov (United States)

    Koljonen, Marja-Liisa; Gross, Riho; Koskiniemi, Jarmo

    2014-12-01

    For responsible fisheries management of threatened species, it is essential to know the composition of catches and the extent to which fisheries exploit weak wild populations. The threatened Estonian, Finnish and Russian sea trout populations in the Gulf of Finland are targets of mixed-stock fisheries. The fish may originate from rivers with varying production capacities, from different countries, and they may also have either a wild or hatchery origin. In order to resolve the composition of Finnish coastal sea trout catches, we created a standardized baseline dataset of 15 DNA microsatellite loci for 59 sea trout populations around the Gulf of Finland and tested its resolution for mixed-stock analysis of 1372 captured fish. The baseline dataset provided sufficient resolution for reliable mixture analysis at regional group level, and also for most of the individual rivers stocks. The majority (76-80%) of the total catch originated from Finnish sea trout populations, 6-9% came from Russian and 12-15% from Estonian populations. Nearly all Finnish trout in the catch were of hatchery origin, while the Russian and Estonian trout were mostly of wild origin. The proportion of fish in the Finnish catches that originated from rivers with natural production was at least one fifth (22%, 19-23%). Two different spotting patterns were observed among the captured trout, with a small and sparsely spotted form being markedly more common among individuals of Russian (28%) and Estonian origin (22%) than among fish assigned to a Finnish origin (0.7%).

  19. Lake trout rehabilitation in Lake Ontario

    Science.gov (United States)

    Elrod, Joseph H.; O'Gorman, Robert; Schneider, Clifford P.; Eckert, Thomas H.; Schaner, Ted; Bowlby, James N.; Schleen, Larry P.

    1995-01-01

    Attempts to maintain the native lake trout (Salvelinus namaycush) population in Lake Ontario by stocking fry failed and the species was extirpated by the 1950s. Hatchery fish stocked in the 1960s did not live to maturity because of sea lamprey (Petromyzon marinus) predation and incidental commercial harvest. Suppression of sea lampreys began with larvicide treatments of Lake Ontario tributaries in 1971 and was enhanced when the tributaries of Oneida Lake and Lake Erie were treated in the 1980s. Annual stocking of hatchery fish was resumed with the 1972 year class and peaked at about 1.8 million yearlings and 0.3 million fingerlings from the 1985–1990 year classes. Survival of stocked yearlings declined over 50% in the 1980 s and was negatively correlated with the abundance of lake trout > 550 mm long (r = −0.91, P < 0.01, n = 12). A slot length limit imposed by the State of New York for the 1988 fishing season reduced angler harvest. Angler harvest in Canadian waters was 3 times higher in eastern Lake Ontario than in western Lake Ontario. For the 1977–1984 year classes, mean annual survival rate of lake trout age 6 and older was 0.45 (range: 0.35–0.56). In U.S. waters during 1985–1992, the total number of lake trout harvested by anglers was about 2.4 times greater than that killed by sea lampreys. The number of unmarked lake trout < 250 mm long in trawl catches in 1978–1992 was not different from that expected due to loss of marks and failure to apply marks at the hatchery, and suggested that recruitment of naturally-produced fish was nil. However, many of the obstacles which may have impeded lake trout rehabilitation in Lake Ontario during the 1980s are slowly being removed, and there are signs of a general ecosystem recovery. Significant recruitment of naturally produced lake trout by the year 2000, one interim objective of the rehabilitation plan for the Lake, may be achieved.

  20. Kootenai River Fisheries Investigations; Rainbow and Bull Trout Recruitment, 2003-2004 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Walters, Jody P.

    2005-08-01

    Rainbow trout Oncorhynchus mykiss provide the most important sport fishery in the Kootenai River, Idaho, but densities and catch rates are low. Low recruitment is one possible factor limiting the rainbow trout population. Bull trout Salvelinus confluentus also exist in the Kootenai River, but little is known about this population. Research reported here addresses the following objectives for the Kootenai River, Idaho: identify sources of rainbow and bull trout recruitment, monitor the rainbow trout population size structure to evaluate regulation changes initiated in 2002, and identify factors potentially limiting rainbow trout recruitment. A screw trap was used to estimate juvenile redband and bull trout out-migration from the Callahan Creek drainage, and electrofishing was conducted to estimate summer densities of bull trout rearing in the Idaho portion of the drainage. An estimated 1,132 juvenile redband trout and 68 juvenile bull trout out-migrated from Callahan Creek to the Kootenai River from April 7 through July 15, 2003. Densities of bull trout {ge} age-1 in North and South Callahan creeks ranged from 1.6 to 7.7 fish/100m{sup 2} in August. Bull trout redd surveys were conducted in North and South Callahan creeks, Boulder Creek, and Myrtle Creek. Thirty-two bull trout redds were located in North Callahan Creek, while 10 redds were found in South Callahan Creek. No redds were found in the other two streams. Modeling of culverts in the Deep Creek drainage identified two as upstream migration barriers, preventing rainbow trout from reaching spawning and rearing habitat. Water temperature monitoring in Deep Creek identified two sites where maximum temperatures exceeded those suitable for rainbow trout. Boulder Creek produces the most rainbow trout recruits to the Kootenai River in Idaho upstream of Deep Creek, but may be below carrying capacity for rearing rainbow trout due to nutrient limitations. Monthly water samples indicate Boulder Creek is nutrient limited

  1. Population size, habitat fragmentation, and the nature of adaptive variation in a stream fish.

    Science.gov (United States)

    Fraser, Dylan J; Debes, Paul V; Bernatchez, Louis; Hutchings, Jeffrey A

    2014-09-07

    Whether and how habitat fragmentation and population size jointly affect adaptive genetic variation and adaptive population differentiation are largely unexplored. Owing to pronounced genetic drift, small, fragmented populations are thought to exhibit reduced adaptive genetic variation relative to large populations. Yet fragmentation is known to increase variability within and among habitats as population size decreases. Such variability might instead favour the maintenance of adaptive polymorphisms and/or generate more variability in adaptive differentiation at smaller population size. We investigated these alternative hypotheses by analysing coding-gene, single-nucleotide polymorphisms associated with different biological functions in fragmented brook trout populations of variable sizes. Putative adaptive differentiation was greater between small and large populations or among small populations than among large populations. These trends were stronger for genetic population size measures than demographic ones and were present despite pronounced drift in small populations. Our results suggest that fragmentation affects natural selection and that the changes elicited in the adaptive genetic composition and differentiation of fragmented populations vary with population size. By generating more variable evolutionary responses, the alteration of selective pressures during habitat fragmentation may affect future population persistence independently of, and perhaps long before, the effects of demographic and genetic stochasticity are manifest. © 2014 The Author(s) Published by the Royal Society. All rights reserved.

  2. Wigwam River Juvenile Bull Trout and Fish Habitat Monitoring Program : 2002 Data Report.

    Energy Technology Data Exchange (ETDEWEB)

    Cope, R.S. [Westslope Fisheries, Cranbrook, BC, Canada

    2003-03-01

    The Wigwam River bull trout (Salvelinus confluentus) and fish habitat monitoring program is a trans-boundary initiative implemented by the British Columbia Ministry of Water, Land, and Air Protection (MWLAP), in cooperation with Bonneville Power Administration (BPA). The Wigwam River is an important fisheries stream located in southeastern British Columbia that supports healthy populations of both bull trout and Westslope cutthroat trout (Figure 1). This river has been characterized as the single most important bull trout spawning stream in the Kootenay Region (Baxter and Westover 2000, Cope 1998). In addition, the Wigwam River supports some of the largest Westslope cutthroat trout (Oncorhynchus clarki lewisi) in the Kootenay Region. These fish are highly sought after by anglers (Westover 1999a, 1999b). Bull trout populations have declined in many areas of their range within Montana and throughout the northwest including British Columbia. Bull trout were blue listed as vulnerable in British Columbia by the B.C. Conservation Data Center (Cannings 1993) and although there are many healthy populations of bull trout in the East Kootenay they remain a species of special concern. Bull trout in the United States portion of the Columbia River were listed as threatened in 1998 under the Endangered Species Act by the U.S. Fish and Wildlife Service. The upper Kootenay River is within the Kootenai sub-basin of the Mountain Columbia Province, one of the eleven Eco-provinces that make up the Columbia River Basin. MWLAP applied for and received funding from BPA to assess and monitor the status of wild, native stocks of bull trout in tributaries to Lake Koocanusa (Libby Reservoir) and the upper Kootenay River. This task is one of many that were undertaken to ''Monitor and Protect Bull Trout for Koocanusa Reservoir'' (BPA Project Number 2000-04-00).

  3. Wigwam River Juvenile Bull Trout and Fish Habitat Monitoring Program : 2000 Data Report.

    Energy Technology Data Exchange (ETDEWEB)

    Cope, R.S.; Morris, K.J.

    2001-03-01

    The Wigwam River bull trout (Salvelinus confluentus) and fish habitat monitoring program is a trans-boundary initiative implemented by the British Columbia Ministry of Environment, Lands and Parks (MOE), in cooperation with Bonneville Power Administration (BPA). The Wigwam River is an important fisheries stream located in southeastern British Columbia that supports healthy populations of both bull trout and Westslope cutthroat trout (Figure 1.1). This river has been characterized as the single most important bull trout spawning stream in the Kootenay Region (Baxter and Westover 2000, Cope 1998). In addition, the Wigwam River supports some of the largest Westslope cutthroat trout (Oncorhynchus clarki lewisi) in the Kootenay Region. These fish are highly sought after by anglers (Westover 1999a, 1999b). Bull trout populations have declined in many areas of their range within Montana and throughout the northwest including British Columbia. Bull trout were blue listed as vulnerable in British Columbia by the B.C. Conservation Data Center (Cannings 1993) and although there are many healthy populations of bull trout in the East Kootenays they remain a species of special concern. Bull trout in the United States portion of the Columbia River were listed as threatened in 1998 under the Endangered Species Act by the U.S. Fish and Wildlife Service. The upper Kootenay River is within the Kootenai sub-basin of the Mountain Columbia Province, one of the eleven Eco-provinces that make up the Columbia River Basin. MOE applied for and received funding from BPA to assess and monitor the status of wild, native stocks of bull trout in tributaries to Lake Koocanusa (Libby Reservoir) and the upper Kootenay River. This task is one of many that was undertaken to ''Monitor and Protect Bull Trout for Koocanusa Reservoir'' (BPA Project Number 2000-04-00).

  4. The fishing and natural mortality of large, piscivorous Bull Trout and Rainbow Trout in Kootenay Lake, British Columbia (2008–2013

    Directory of Open Access Journals (Sweden)

    Joseph L. Thorley

    2017-01-01

    Full Text Available Background Estimates of fishing and natural mortality are important for understanding, and ultimately managing, commercial and recreational fisheries. High reward tags with fixed station acoustic telemetry provides a promising approach to monitoring mortality rates in large lake recreational fisheries. Kootenay Lake is a large lake which supports an important recreational fishery for large Bull Trout and Rainbow Trout. Methods Between 2008 and 2013, 88 large (≥500 mm Bull Trout and 149 large (≥500 mm Rainbow Trout were marked with an acoustic transmitter and/or high reward ($100 anchor tags in Kootenay Lake. The subsequent detections and angler recaptures were analysed using a Bayesian individual state-space Cormack–Jolly–Seber (CJS survival model with indicator variable selection. Results The final CJS survival model estimated that the annual interval probability of being recaptured by an angler was 0.17 (95% CRI [0.11–0.23] for Bull Trout and 0.14 (95% CRI [0.09–0.19] for Rainbow Trout. The annual interval survival probability for Bull Trout was estimated to have declined from 0.91 (95% CRI [0.76–0.97] in 2009 to just 0.46 (95% CRI [0.24–0.76] in 2013. Rainbow Trout survival was most strongly affected by spawning. The annual interval survival probability was 0.77 (95% CRI [0.68–0.85] for a non-spawning Rainbow Trout compared to 0.41 (95% CRI [0.30–0.53] for a spawner. The probability of spawning increased with the fork length for both species and decreased over the course of the study for Rainbow Trout. Discussion Fishing mortality was relatively low and constant while natural mortality was relatively high and variable. The results indicate that angler effort is not the primary driver of short-term population fluctations in the Rainbow Trout abundance. Variation in the probability of Rainbow Trout spawning suggests that the spring escapement at the outflow of Trout Lake may be a less reliable index of abundance than

  5. Behavioral avoidance: Possible mechanism for explaining abundanc and distribution of trout species in a metal-impacted river

    Science.gov (United States)

    Hansen, James A.; Woodward, Daniel F.; Little, Edward E.; DeLonay, Aaron J.; Bergman, Harold L.

    1999-01-01

    Behavioral avoidance of metal mixtures by rainbow trout (Oncorhynchus mykiss) was determined in the laboratory under water quality conditions that simulated the upper Clark Fork River, Montana, USA. A metal mixture with a fixed ratio of observed ambient metal concentrations (12 μg/L Cu:1.1 μg/L Cd:3.2 μg/L Pb:50 μg/L Zn) was used to determine avoidance in a countercurrent avoidance chamber. Rainbow trout avoided all metal concentrations tested from 10 to 1,000% of the simulated ambient metal mixture. The behavioral response of rainbow trout to the metal mixture was more sensitive than the response of brown trout (Salmo trutta) previously reported from the same laboratory under the same experimental conditions. Additionally, rainbow trout that were acclimated to the simulated ambient metal mixture for 45 d preferred clean water and avoided higher metal concentrations. Therefore, our laboratory experiments on the behavioral avoidance responses of rainbow trout, as well as previously reported experiments on brown trout, show that both species will avoid typical metal concentrations observed on the Clark Fork River. And the greater sensitivity of rainbow trout to the metal mixture may explain, in part, why rainbow trout populations appear to be more severely affected, compared to brown trout populations, in the upper Clark Fork River.

  6. A Long-Term Comparison of Yellowstone Cutthroat Trout Abundance and Size Structure in Their Historical Range in Idaho.

    Energy Technology Data Exchange (ETDEWEB)

    Meyer, Kevin A.; Schill, Daniel J.; Elle, F. Steven

    2002-05-23

    We compared estimates of population abundance and size structure for Yellowstone cutthroat trout Oncorhynchus clarki bouvieri obtained by electrofishing 77 stream segments across southeastern Idaho in the 1980s and again in 1999-2000 to test whether populations of Yellowstone cutthroat trout had changed. Sites sampled in the 1980s were relocated in 1999-2000 by using maps and photographs or by finding original site-boundary stakes, so that the same reach of stream was sampled during both periods. Abundance of Yellowstone cutthroat trout longer than 10 cm did not change, averaging 41 fish/100 m of stream during both the 1980s and 1999-2000. The proportion of the total catch of trout composed of Yellowstone cutthroat trout also did not change, averaging 82% in the 1980s and 78% in 1999-2000. At the 48 sites where size structure could be estimated for both periods, the proportion of Yellowstone cutthroat trout that were 10-20 cm long declined slightly (74% versus 66%), but the change was due entirely to the shift in size structure at the Teton River sites. The number of sites that contained rainbow trout O. mykiss or cutthroat trout 3 rainbow trout hybrids rose from 23 to 37, but the average proportion of the catch composed of rainbow trout and hybrids did not increase (7% in both the 1980s and 1999-2000). Although the distribution and abundance of Yellowstone cutthroat trout have been substantially reduced in Idaho over the last century, our results indicate that Yellowstone cutthroat trout abundance and size structure in Idaho have remained relatively stable at a large number of locations for the last 10-20 years. The expanding distribution of rainbow trout and hybrids in portions of the upper Snake River basin, however, calls for additional monitoring and active management actions.

  7. Study of Some Morphological Characters of Three Trout Breed Farmed in Salmonid Exploitations from Moldova

    Directory of Open Access Journals (Sweden)

    Cătălin Emilian Nistor

    2014-05-01

    Full Text Available Study of morphological characters at fish by means of biometry is a frequently utilized method and consists in determining the variability of characters in groups of individuals, by direct measurement, weighting and statistical processing of obtained data.Effectuation of body measurements and weighting is used to determine the increase in length of fish and to evaluate the general physiological condition. Brook trout, rainbow trout, and brown trout were the object of the current study by analyzing of 50 individuals, 10 individuals in each batch (F1, F2, C1 C2 and I1, from two trout farms from Moldova. After processing the obtained data were calculated the most representative indexes and maintenance coefficients. The obtained values were between 3.49 at batch F1 and 3.94 at batch I1 for profile index; 1.5 at batch I1 and 1.75 at batch F1 for Fulton coefficient; 1.47 at batch F2 and 1.6 at batch I1 for Kiselev index; 41.36 for batch F1 and 47.94 at batch C2 for thickness index; 19.94 C1 batch and 22.08 at F1 batch for fleshy index I, and 19.05 C2 batch and 21.2 at I1 batch for fleshy index II. Having in view the obtained results we can conclude that the analyzed fishes had a good state of maintenance.

  8. Embryotoxicity of an extract from Great Lakes lake trout to rainbow trout and lake trout

    Energy Technology Data Exchange (ETDEWEB)

    Wright, P.J.; Tillitt, D.E. [National Biological Service, Columbia, MO (United States). Midwest Science Center

    1995-12-31

    Aquatic ecosystems such as the Great Lakes are known to be contaminated with chemicals that are toxic to fish. However, the role of these contaminants in reproductive failures of fishes, such as lake trout recruitment, has remained controvertible. It was the objective to evaluate dioxin-like embryotoxicity of a complex mixture of chemicals and predict their potential to cause the lack of recruitment in Great Lakes lake trout. Graded doses of a complex environmental extract were injected into eggs of both rainbow trout and lake trout. The extract was obtained from whole adult lake trout collected from Lake Michigan in 1988. The extract was embryotoxic in rainbow trout, with LD50 values for Arlee strain and Erwin strain of 33 eggEQ and 14 eggEQ respectively. The LOAEL for hemorrhaging, yolk-sac edema, and craniofacial deformities in rainbow trout were 2, 2, and 4 eggEQ, respectively. Subsequent injections of the extract into lake trout eggs were likewise embryotoxic, with an LD50 value of 7 eggEQ. The LOAEL values for the extract in lake trout for hemorrhaging, yolk-sac edema, and craniofacial deformities were 0.1, 1, and 2 eggEQ, respectively. The current levels of contaminants in lake trout eggs are above the threshold for hemorrhaging and yolk-sac edema. The results also support the use of an additive model of toxicity to quantify PCDDs, PCDFs, Non-o-PCBs, and Mono-o-PCBs in relation to early life stage mortality in Lake Michigan lake trout.

  9. Bull Trout Life History, Genetics, Habitat Needs, and Limiting Fact in Central and Northeast Oregon. Annual Report 1999.

    Energy Technology Data Exchange (ETDEWEB)

    Hemmingsen, Alan R.; Gunckel, Stephanie L.; Howell, Philip J.

    2001-08-01

    This section describes work accomplished in 1999 that continued to address two objectives of this project. These objectives are (1) determine the distribution of juvenile and adult bull trout Salvelinus confluentus and habitats associated with that distribution, and (2) determine fluvial and resident bull trout life history patterns. Completion of these objectives is intended through studies of bull trout in the Grande Ronde, Walla Walla, and John Day basins. These basins were selected because they provide a variety of habitats, from relatively degraded to pristine, and bull trout populations were thought to vary from relatively depressed to robust. In all three basins we used radio telemetry to determine the seasonal movements of bull trout. In the John Day and Walla Walla basins we also used traps to capture migrant bull trout. With these traps, we intended to determine the timing of bull trout movements both upstream and downstream, determine the relative abundance, size and age of migrant fish, and capture bull trout to be implanted with radio transmitters. In the John Day basin, we captured adult and juvenile bull trout from the upper John Day River and its tributaries, Call Creek, Reynolds Creek, and Roberts Creek. In the Walla Walla basin, we captured adult and juvenile bull trout from Mill Creek.

  10. Complex interaction between proliferative kidney disease, water temperature and concurrent nematode infection in brown trout.

    Science.gov (United States)

    Schmidt-Posthaus, Heike; Steiner, Pascale; Müller, Barbara; Casanova-Nakayama, Ayako

    2013-04-29

    Proliferative kidney disease (PKD) is a temperature-dependent disease caused by the myxozoan Tetracapsuloides bryosalmonae. It is an emerging threat to wild brown trout Salmo trutta fario populations in Switzerland. Here we examined (1) how PKD prevalence and pathology in young-of-the-year (YOY) brown trout relate to water temperature, (2) whether wild brown trout can completely recover from T. bryosalmonae-induced renal lesions and eliminate T. bryosalmonae over the winter months, and (3) whether this rate and/or extent of the recovery is influenced by concurrent infection. A longitudinal field study on a wild brown trout cohort was conducted over 16 mo. YOY and age 1+ fish were sampled from 7 different field sites with various temperature regimes, and monitored for infection with T. bryosalmonae and the nematode Raphidascaris acus. T. bryosamonae was detectable in brown trout YOY from all sampling sites, with similar renal pathology, independent of water temperature. During winter months, recovery was mainly influenced by the presence or absence of concurrent infection with R. acus larvae. While brown trout without R. acus regenerated completely, concurrently infected brown trout showed incomplete recovery, with chronic renal lesions and incomplete translocation of T. bryosalmonae from the renal interstitium into the tubular lumen. Water temperature seemed to influence complete excretion of T. bryosalmonae, with spores remaining in trout from summer-warm rivers, but absent in trout from summer-cool rivers. In the following summer months, we found PKD infections in 1+ brown trout from all investigated river sites. The pathological lesions indicated a re-infection rather than a proliferation of remaining T. bryosalmonae. However, disease prevalence in 1+ trout was lower than in YOY.

  11. Stocking impact and migration pattern in an anadromous brown trout ( Salmo trutta ) complex: where have all the stocked spawning sea trout gone?

    DEFF Research Database (Denmark)

    Ruzzante, D.E.; Hansen, Michael Møller; Meldrup, Dorte

    2004-01-01

    We examined polymorphism at seven microsatellite loci among sea trout (Salmo trutta) (n = 846) collected from three areas in the Limfjord (Denmark). We then assessed their potential population source by comparing, using a mixed stock analysis (MSA) Bayesian framework, their genetic composition...... to that of brown trout collected from 32 tributaries pooled into nine geographical regions (n = 3801) and two hatcheries (n = 222) used for stocking. For each of the three regional sea trout groups (western, central and eastern Limfjord, n = 91, n = 426, n = 329, respectively), MSA was conducted with (i) all...

  12. Predicting spatial distribution of postfire debris flows and potential consequences for native trout in headwater streams

    Science.gov (United States)

    Sedell, Edwin R; Gresswell, Bob; McMahon, Thomas E.

    2015-01-01

    Habitat fragmentation and degradation and invasion of nonnative species have restricted the distribution of native trout. Many trout populations are limited to headwater streams where negative effects of predicted climate change, including reduced stream flow and increased risk of catastrophic fires, may further jeopardize their persistence. Headwater streams in steep terrain are especially susceptible to disturbance associated with postfire debris flows, which have led to local extirpation of trout populations in some systems. We conducted a reach-scale spatial analysis of debris-flow risk among 11 high-elevation watersheds of the Colorado Rocky Mountains occupied by isolated populations of Colorado River Cutthroat Trout (Oncorhynchus clarkii pleuriticus). Stream reaches at high risk of disturbance by postfire debris flow were identified with the aid of a qualitative model based on 4 primary initiating and transport factors (hillslope gradient, flow accumulation pathways, channel gradient, and valley confinement). This model was coupled with a spatially continuous survey of trout distributions in these stream networks to assess the predicted extent of trout population disturbances related to debris flows. In the study systems, debris-flow potential was highest in the lower and middle reaches of most watersheds. Colorado River Cutthroat Trout occurred in areas of high postfire debris-flow risk, but they were never restricted to those areas. Postfire debris flows could extirpate trout from local reaches in these watersheds, but trout populations occupy refugia that should allow recolonization of interconnected, downstream reaches. Specific results of our study may not be universally applicable, but our risk assessment approach can be applied to assess postfire debris-flow risk for stream reaches in other watersheds.

  13. Larval long-toed salamanders incur nonconsumptive effects in the presence of nonnative trout

    Science.gov (United States)

    Kenison, Erin K.; Litt, Andrea R.; Pilliod, David; McMahon, Thomas E.

    2016-01-01

    Predators can influence prey directly through consumption or indirectly through nonconsumptive effects (NCEs) by altering prey behavior, morphology, and life history. We investigated whether predator-avoidance behaviors by larval long-toed salamanders (Ambystoma macrodactylum) in lakes with nonnative trout result in NCEs on morphology and development. Field studies in lakes with and without trout were corroborated by experimental enclosures, where prey were exposed only to visual and chemical cues of predators. We found that salamanders in lakes with trout were consistently smaller than in lakes without trout: 38% lower weight, 24% shorter body length, and 29% shorter tail length. Similarly, salamanders in protective enclosures grew 2.9 times slower when exposed to visual and olfactory trout cues than when no trout cues were present. Salamanders in trout-free lakes and enclosures were 22.7 times and 1.48 times, respectively, more likely to metamorphose during the summer season than those exposed to trout in lakes and/or their cues. Observed changes in larval growth rate and development likely resulted from a facultative response to predator-avoidance behavior and demonstrate NCEs occurred even when predation risk was only perceived. Reduced body size and growth, as well as delayed metamorphosis, could have ecological consequences for salamander populations existing with fish if those effects carry-over into lower recruitment, survival, and fecundity.

  14. Heavy metal contamination and hepatic toxicological responses in brown trout (Salmo trutta from the Kerguelen Islands

    Directory of Open Access Journals (Sweden)

    Ali Jaffal

    2015-09-01

    Full Text Available The Kerguelen Islands include various species of freshwater fish such as brown trout (Salmo trutta. These trout are among the most isolated from direct anthropogenic impact worldwide. This study was designed to analyse cadmium (Cd and copper (Cu concentrations in the liver of Kerguelen brown trout, and to assess the possible impacts of these metals on hepatic histopathology and oxidative stress parameters (superoxide dismutase and catalase activity and glutathione levels. Trout were caught in the Château River, the Studer Lakes and the Ferme Pond, close to the scientific station of the Kerguelen Islands, corresponding to three morphotypes (river, lake and station. Kerguelen trouts’ hepatic concentrations of Cd and Cur were similar to those reported in previous studies in salmonids populations from areas under anthropological impacts. Clear hepatic disturbances (fibrosis, nuclear alteration, increased immune response, melanomacrophage centres [MMCs] were observed in all tested trout. A similar histo-pathological trend was observed among the trout from the three morphotypes but anti-oxidative responses were higher in the trout from the “station” morphotype. Hepatic alterations and the presence of MMCs in the livers of Kerguelen brown trout may be related to the high levels of Cd and Cu measured in this fish at all sampling sites.

  15. Use of naturally occurring mercury to determine the importance of cutthroat trout to Yellowstone grizzly bears

    Science.gov (United States)

    Felicetti, L.A.; Schwartz, C.C.; Rye, R.O.; Gunther, K.A.; Crock, J.G.; Haroldson, M.A.; Waits, L.; Robbins, C.T.

    2004-01-01

    Spawning cutthroat trout (Oncorhynchus clarki (Richardson, 1836)) are a potentially important food resource for grizzly bears (Ursus arctos horribilis Ord, 1815) in the Greater Yellowstone Ecosystem. We developed a method to estimate the amount of cutthroat trout ingested by grizzly bears living in the Yellowstone Lake area. The method utilized (i) the relatively high, naturally occurring concentration of mercury in Yellowstone Lake cutthroat trout (508 ± 93 ppb) and its virtual absence in all other bear foods (6 ppb), (ii) hair snares to remotely collect hair from bears visiting spawning cutthroat trout streams between 1997 and 2000, (iii) DNA analyses to identify the individual and sex of grizzly bears leaving a hair sample, (iv) feeding trials with captive bears to develop relationships between fish and mercury intake and hair mercury concentrations, and (v) mercury analyses of hair collected from wild bears to estimate the amount of trout consumed by each bear. Male grizzly bears consumed an average of 5 times more trout/kg bear than did female grizzly bears. Estimated cutthroat trout intake per year by the grizzly bear population was only a small fraction of that estimated by previous investigators, and males consumed 92% of all trout ingested by grizzly bears.

  16. Assessment of genetic correlation between bacterial cold water disease resistance and spleen index in a domesticated population of rainbow trout: identification of QTL on chromosome Omy19.

    Directory of Open Access Journals (Sweden)

    Gregory D Wiens

    Full Text Available Selective breeding of animals for increased disease resistance is an effective strategy to reduce mortality in aquaculture. However, implementation of selective breeding programs is limited by an incomplete understanding of host resistance traits. We previously reported results of a rainbow trout selection program that demonstrated increased survival following challenge with Flavobacterium psychrophilum, the causative agent of bacterial cold water disease (BCWD. Mechanistic study of disease resistance identified a positive phenotypic correlation between post-challenge survival and spleen somatic-index (SI. Herein, we investigated the hypothesis of a genetic correlation between the two traits influenced by colocalizing QTL. We evaluated the inheritance and calculated the genetic correlation in five year-classes of odd- and even-year breeding lines. A total of 322 pedigreed families (n = 25,369 fish were measured for disease resistance, and 251 families (n = 5,645 fish were evaluated for SI. Spleen index was moderately heritable in both even-year (h(2  = 0.56±0.18 and odd-year (h(2  = 0.60±0.15 lines. A significant genetic correlation between SI and BCWD resistance was observed in the even-year line (rg  = 0.45±0.20, P = 0.03 but not in the odd-year line (rg  = 0.16±0.12, P = 0.19. Complex segregation analyses of the even-year line provided evidence of genes with major effect on SI, and a genome scan of a single family, 2008132, detected three significant QTL on chromosomes Omy19, 16 and 5, in addition to ten suggestive QTL. A separate chromosome scan for disease resistance in family 2008132 identified a significant BCWD QTL on Omy19 that was associated with time to death and percent survival. In family 2008132, Omy19 microsatellite alleles that associated with higher disease resistance also associated with increased spleen size raising the hypothesis that closely linked QTL contribute to the correlation between

  17. Assessing effects of stocked trout on nongame fish assemblages in southern Appalachian Mountain streams

    Science.gov (United States)

    Weaver, D.; Kwak, Thomas J.

    2013-01-01

    Fisheries managers are faced with the challenge of balancing the management of recreational fisheries with that of conserving native species and preserving ecological integrity. The negative effects that nonnative trout species exert on native trout are well documented and include alteration of competitive interactions, habitat use, and production. However, the effects that nonnative trout may exert on nongame fish assemblages are poorly understood. Our objectives were to quantify the effects of trout stocking on native nongame fish assemblages intensively on one newly stocked river, the North Toe River, North Carolina, and extensively on other southern Appalachian Mountain streams that are annually stocked with trout. In the intensive study, we adopted a before-after, control-impact (BACI) experimental design to detect short-term effects on the nongame fish assemblage and found no significant differences in fish density, species richness, species diversity, or fish microhabitat use associated with trout stocking. We observed differences in fish microhabitat use between years, however, which suggests there is a response to environmental changes, such as the flow regime, which influence available habitat. In the extensive study, we sampled paired stocked and unstocked stream reaches to detect long-term effects from trout stocking; however, we detected no differences in nongame fish density, species richness, species diversity, or population size structure between paired sites. Our results revealed high inherent system variation caused by natural and anthropogenic factors that appear to overwhelm any acute or chronic effect of stocked trout. Furthermore, hatchery-reared trout may be poor competitors in a natural setting and exert a minimal or undetectable impact on native fish assemblages in these streams. These findings provide quantitative results necessary to assist agencies in strategic planning and decision making associated with trout fisheries, stream

  18. Impacts of Northern Pike on stocked Rainbow Trout in Pactola Reservoir, South Dakota

    Science.gov (United States)

    Scheibel, Natalie C.; Dembkowski, Daniel J.; Davis, Jacob L.; Chipps, Steven R.

    2016-01-01

    Establishment of nonnative Northern Pike Esox lucius in Pactola Reservoir, South Dakota, has prompted concern among biologists about the influence of this species on the lake’s intensively managed salmonid fisheries. Ancedotal information suggests that catch rates of Rainbow Trout Oncorhynchus mykiss have declined while mean size and abundance of Northern Pike has increased, although quantitative information on diet and growth of the Northern Pike population is lacking. To address potential interactions between Northern Pike and Rainbow Trout, we assessed size-dependent predation by Northern Pike on Rainbow Trout and determined the relative energetic contribution of stocked Rainbow Trout to Northern Pike growth using bioenergetics modeling. Stable isotopes combined with traditional diet analyses revealed that smaller Northern Pike (<600 mm TL) consumed primarily centrarchids and Rainbow Smelt Osmerus mordax, and Rainbow Trout contributed less than 10% to their annual energy consumption. In contrast, larger Northern Pike (≥600 mm TL) consumed primarily Rainbow Trout, which accounted for 56% of their annual energy consumption. Combining estimates of Northern Pike predation with production costs of catchable-size Rainbow Trout revealed that annual economic losses ranged from US$15,259 to $24,801 per year. Over its lifespan, an age-10 Northern Pike was estimated to consume ~117 Rainbow Trout worth approximately $340. Thus, Northern Pike predation substantially influences salmonid management initiatives and is likely a primary factor contributing to reduced Rainbow Trout abundance and return to anglers in Pactola Reservoir. Strategies for reducing Northern Pike predation on Rainbow Trout include increasing the size of stocked fish or altering the timing and spatial distribution of stocking events.

  19. Foote Brook Macroinvertebrate Biomonitoring - Phase 2 in Johnson, Vermont

    Data.gov (United States)

    Vermont Center for Geographic Information — In 2000, Foote Brook was identified as a high priority site for restoration after the extensive countywide stream stability study, Stream Stability Assessment of...

  20. VT Foote Brook Natural Channel Design Restoration 2001-2002

    Data.gov (United States)

    Vermont Center for Geographic Information — (Link to Metadata) The Foote Brook, located in Johnson, Vermont, is known to biologists and anglers as a high quality stream with significant natural reproduction of...

  1. Foote Brook Macroinvertebrate Biomonitoring-Phase I in Johnson, Vermont

    Data.gov (United States)

    Vermont Center for Geographic Information — The Foote Brook Biomonitoring Project, Phase I geospatial dataset consists of data from the biomonitoring of benthic macroinvertebrates at three sites located along...

  2. VT Foote Brook Natural Channel Design Restoration 2003

    Data.gov (United States)

    Vermont Center for Geographic Information — (Link to Metadata) The Foote Brook, located in Johnson, Vermont, is known to biologists and anglers as a high quality stream with significant natural reproduction of...

  3. Mitochondrial dysfunction in Brooks-Wisniewski-Brown syndrome.

    NARCIS (Netherlands)

    Morava, E.; Rodenburg, R.J.T.; Hol, F.A.; Meirleir, L. de; Seneca, S.; Busch, R.; Heuvel, L.P.W.J. van den; Smeitink, J.A.M.

    2006-01-01

    Brooks, Wisniewski, and Brown described a familial presentation of severe developmental retardation, speech delay, static encephalopathy with atrophic hydrocephalus, microcephaly, progressive spastic diplegia, a characteristic facial appearance, optic atrophy, and growth retardation associated with

  4. Increasing thiamine concentrations in lake trout eggs from Lakes Huron and Michigan coincide with low alewife abundance

    Science.gov (United States)

    Riley, Stephen C.; Rinchard, Jacques; Honeyfield, Dale C.; Evans, Allison N.; Begnoche, Linda

    2011-01-01

    Lake trout Salvelinus namaycush in the Laurentian Great Lakes suffer from thiamine deficiency as a result of adult lake trout consuming prey containing thiaminase, a thiamine-degrading enzyme. Sufficiently low egg thiamine concentrations result in direct mortality of or sublethal effects on newly hatched lake trout fry. To determine the prevalence and severity of low thiamine in lake trout eggs, we monitored thiamine concentrations in lake trout eggs from 15 sites in Lakes Huron and Michigan from 2001 to 2009. Lake trout egg thiamine concentrations at most sites in both lakes were initially low and increased over time at 11 of 15 sites, and the proportion of females with egg thiamine concentrations lower than the recommended management objective of 4 nmol/g decreased over time at eight sites. Egg thiamine concentrations at five of six sites in Lakes Huron and Michigan were significantly inversely related to site-specific estimates of mean abundance of alewives Alosa pseudoharengus, and successful natural reproduction of lake trout has been observed in Lake Huron since the alewife population crashed. These results support the hypothesis that low egg thiamine in Great Lakes lake trout is associated with increased alewife abundance and that low alewife abundance may currently be a prerequisite for successful reproduction by lake trout in the Great Lakes.

  5. BACTERIAL FLORA OF RAINBOW TROUT LARVAE AND FRY (ONCORHYNCHUS MYKISS

    Directory of Open Access Journals (Sweden)

    Damir Kapetanović

    2003-09-01

    Full Text Available There are no information in available literature about the structure of bacterial flora in rainbow trout larvae and fry in the first days of their lives. The objective of our work has been to follow bacteroflora between the third and the eighth week of their lives. During 35 days of experiment bacteroflora of rainbow trout has been examined, along with following physico–chemical characteristics of water quality as well as it’s influence on health. Samples for bacteriological examination were taken from gill, heart and kidney areas and innoculated on the plates. Bacterial colonies were examined macroscopically, slides with Gram staining, and afterwords biochemical tests were performed. For identification, APILAB Plus programme (bio Mérieux, France was used. Bacterial population of rainbow trout larvae and fry changed in dependence with their age. Physico–chemical characteristics of water ranged within optimal values. Most of bacterial colonies originated from gill isolates (64,4 %, than from heart (21,8 % and kidney areas (13,8 %. The bacterial flora of larvae in incubator was composed mostly of Gram–positive bacteria (75,1 %, genera: Renibacterium (25 %, Lactobacillus (16,7 %, Staphilococcus (16,7 % and Corynebacterium (16,7 %. The transfer of larvae from incubator into the pools resulted in reducing bacterial flora (–66,7 % after 45 minute stay in the pool. Gram–negative bacteria, which have been represented in larvae in incubator with low percent (24, 9 %, after the transfer of larvae to the pools became dominant and represented more than 95 % of rainbow trout larvae and fry bacterial flora. Flavobacterium, Acinetobacter and Yersinia were the predominant Gram–negative genera in larvae in incubator, whereas Aeromonas, Pseudomonas, Flavobacterium and Pasteurella were the main isolates from rainbow trout larvae and fry until the end of experiment. Bacterial flora of larvae in incubator mostly consists of Gram–positive bacteria

  6. Influence of barriers to movement on within-watershed genetic variation of coastal cutthroat trout

    Science.gov (United States)

    Wofford, John E.B.; Gresswell, Robert E.; Banks, M.A.

    2005-01-01

    Because human land use activities often result in increased fragmentation of aquatic and terrestrial habitats, a better understanding of the effects of fragmentation on the genetic heterogeneity of animal populations may be useful for effective management. We used eight microsatellites to examine the genetic structure of coastal cutthroat trout (Oncorhynchus clarki clarki) in Camp Creek, an isolated headwater stream in western Oregon. Our objectives were to determine if coastal cutthroat trout were genetically structured within streams and to assess the effects of natural and anthropogenic barriers on coastal cutthroat trout genetic variation. Fish sampling occurred at 10 locations, and allele frequencies differed significantly among all sampling sections. Dispersal barriers strongly influenced coastal cutthroat trout genetic structure and were associated with reduced genetic diversity and increased genetic differentiation. Results indicate that Camp Creek coastal cutthroat trout exist as many small, partially independent populations that are strongly affected by genetic drift. In headwater streams, barriers to movement can result in genetic and demographic isolation leading to reduced coastal cutthroat trout genetic diversity, and potentially compromising long-term population persistence. When habitat fragmentation eliminates gene flow among small populations, similar results may occur in other species.

  7. Kootenai River Fisheries Investigations; Chapter 3 : Mainstem Habitat Use and Recruitment Estimates of Rainbow Trout, 1996 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Fredericks, James P.; Hendricks, Steve

    1997-09-01

    The objective of this study was to determine if recruitment is limiting the population of rainbow trout Oncorhynchus mykiss in the mainstem Kootenai River. The authors used snorkeling and electrofishing techniques to estimate juvenile rainbow trout density and total numbers in Idaho tributaries, and they trapped juvenile outmigrants to identify the age at which juvenile trout migrate from tributaries to the Kootenai River. The authors radio and reward-tagged post-spawn adult rainbow trout captured in Deep Creek to identify river reach and habitat used by those fish spawning and rearing in the Deep Creek drainage. They also conducted redd surveys in the Kootenai River to determine the extent of mainstem spawning. Based on the amount of available habitat and juvenile rainbow trout densities, the Deep Creek drainage was the most important area for juvenile production. Population estimates of age 0, age 1+, and age 2+ rainbow trout indicated moderate to high densities in several streams in the Deep Creek drainage whereas other streams, such as Deep Creek, had very low densities of juvenile trout. The total number of age 0, age 1+, and age 2+ rainbow trout in Deep Creek drainage in 1996 was estimated to be 63,743, 12,095, and 3,095, respectively. Radio telemetry efforts were hindered by the limited range of the transmitters, but movements of a radio-tagged trout and a returned reward tag indicated that at least a portion of the trout utilizing the Deep Creek drainage migrated downriver from the mouth of Deep Creek to the meandering section of river. They found no evidence of mainstem spawning by rainbow trout, but redd counting efforts were hindered by high flows from mid-April through June.

  8. The abundance of large, piscivorous Ferox Trout (Salmo trutta in Loch Rannoch, Scotland

    Directory of Open Access Journals (Sweden)

    Alastair Thorne

    2016-11-01

    Full Text Available Background Ferox Trout are large, long-lived piscivorous Brown Trout (Salmo trutta. Due to their exceptionally large size, Ferox Trout are highly sought after by anglers while their life-history strategy, which includes delayed maturation, multiphasic growth and extended longevity, is of interest to ecological and evolutionary modelers. However, despite their recreational and theoretical importance, little is known about the typical abundance of Ferox Trout. Methods To rectify this situation a 16 year angling-based mark-recapture study was conducted on Loch Rannoch, which at 19 km2 is one of the largest lakes in the United Kingdom. Results A hierarchical Bayesian Jolly-Seber analysis of the data suggest that if individual differences in catchability are negligible the population of Ferox Trout in Loch Rannoch in 2009 was approximately 71 fish. The results also suggest that a single, often unaccompanied, highly-experienced angler was able to catch roughly 8% of the available fish on an annual basis. Discussion It is recommended that anglers adopt a precautionary approach and release all trout with a fork length ≥400 mm caught by trolling in Loch Rannoch. There is an urgent need to assess the status of Ferox Trout in other lakes.

  9. Proliferative kidney disease in brown trout: infection level, pathology and mortality under field conditions.

    Science.gov (United States)

    Schmidt-Posthaus, Heike; Hirschi, Regula; Schneider, Ernst

    2015-05-21

    Proliferative kidney disease (PKD) is an emerging disease threatening wild salmonid populations. In temperature-controlled aquaria, PKD can cause mortality rates of up to 85% in rainbow trout. So far, no data about PKD-related mortality in wild brown trout Salmo trutta fario are available. The aim of this study was to investigate mortality rates and pathology in brown trout kept in a cage within a natural river habitat known to harbor Tetracapsuloides bryosalmonae. Young-of-the-year (YOY) brown trout, free of T. bryosalmonae, were exposed in the River Wutach, in the northeast of Switzerland, during 3 summer months. Samples of wild brown trout caught by electrofishing near the cage location were examined in parallel. The incidence of PKD in cage-exposed animals (69%) was not significantly different to the disease prevalence of wild fish (82 and 80% in the upstream and downstream locations, respectively). The mortality in cage-exposed animals, however, was as low as 15%. At the termination of the exposure experiment, surviving fish showed histological lesions typical for PKD regression, suggesting that many YOY brown trout survive the initial infection. Our results at the River Wutach suggest that PKD in brown trout does not always result in high mortality under natural conditions.

  10. Intra-strain dioxin sensitivity and morphometric effects in swim-up rainbow trout (Oncorhynchus mykiss)

    Science.gov (United States)

    Carvalho, Paulo S. M.; Noltie, Douglas B.; Tillitt, D.E.

    2004-01-01

    Inter and intra-specific differences in sensitivity of early life stage salmonids to 2,3,7,8-TCDD exposure have been reported, but intra-strain differences have not been found in the literature. Our results indicate that intra-strain variability in terms of embryo mortality (LD50) is small in Eagle Lake strain of rainbow trout, LD50 values ranging from 285 to 457 pg TCDD egg g-1. These results confirm Eagle Lake as a less sensitive strain within rainbow trout, and do not indicate overlap with reported LD50 values for brook or lake trout. Our results also demonstrate that although generalized edema in regions including the yolk-sac are frequently associated with mortality following dioxin exposure, not all edematous fish die. We detected dose-dependent decreases in cranial length, eye diameter, mass, and total length (Pmetabolism of rats and chicken embryos (wasting syndrome). This syndrome could be contributing to the reduced growth that we observed. ?? 2004 Elsevier Inc. All rights reserved.

  11. Using genetic with stable isotope analyses to investigate hybridization between Atlantic salmon, sea-run and stream resident brown trout in a small stream

    OpenAIRE

    Roussel, Jean-Marc; Charles, Katia; Baglinière, Jean-Luc; Guyomard, René; Ombredane, Dominique

    2005-01-01

    Brown trout Salmo trutta and Atlantic salmon Salmo salar can interbreed and produce viable hybrid offspring. Literature indicates that maternal species can either be brown trout (North America) or Atlantic salmon (South- ern Europe and Ireland), and bidirectional hybridization has also been reported (England, Northern Europe and subantarctic French Territory). In coastal rivers where both species are sympatric, brown trout populations often split into two morphs, stream residents ...

  12. Determining vaccination frequency in farmed rainbow trout using Vibrio anguillarum O1 specific serum antibody measurements.

    Directory of Open Access Journals (Sweden)

    Lars Holten-Andersen

    Full Text Available BACKGROUND: Despite vaccination with a commercial vaccine with a documented protective effect against Vibrio anguillarum O1 disease outbreaks caused by this bacterium have been registered among rainbow trout at Danish fish farms. The present study examined specific serum antibody levels as a valid marker for assessing vaccination status in a fish population. For this purpose a highly sensitive enzyme-linked immunosorbent assay (ELISA was developed and used to evaluate sera from farmed rainbow trout vaccinated against V. anguillarum O1. STUDY DESIGN: Immune sera from rainbow trout immunised with an experimental vaccine based on inactivated V. anguillarum O1 bacterin in Freund's incomplete adjuvant were used for ELISA optimisation. Subsequently, sera from farmed rainbow trout vaccinated with a commercial vaccine against V. anguillarum were analysed with the ELISA. The measured serum antibody levels were compared with the vaccine status of the fish (vaccinated/unvaccinated as evaluated through visual examination. RESULTS: Repeated immunisation with the experimental vaccine lead to increasing levels of specific serum antibodies in the vaccinated rainbow trout. The farmed rainbow trout responded with high antibody levels to a single injection with the commercial vaccine. However, the diversity in responses was more pronounced in the farmed fish. Primary visual examinations for vaccine status in rainbow trout from the commercial farm revealed a large pool of unvaccinated specimens (vaccination failure rate=20% among the otherwise vaccinated fish. Through serum analyses using the ELISA in a blinded set-up it was possible to separate samples collected from the farmed rainbow trout into vaccinated and unvaccinated fish. CONCLUSIONS: Much attention has been devoted to development of new and more effective vaccines. Here we present a case from a Danish rainbow trout farm indicating that attention should also be directed to the vaccination procedure in

  13. Monitor and Protect Wigwam River Bull Trout for Koocanusa Reservoir; White River Bull Trout Enumeration Project Summary, Progress Report 2003.

    Energy Technology Data Exchange (ETDEWEB)

    Cope, R.

    2004-02-01

    This report summarizes the first year of a three-year bull trout (Salvelinus confluentus) enumeration project on the White River and is a co-operative initiative of the British Columbia Ministry of Water, Land, and Air Protection and Bonneville Power Administration. The White River has been identified as an important bull trout spawning tributary of the upper Kootenay River in southeastern British Columbia. The objective was to collect information on the returning adult spawning population to the White River through the use of a fish fence and traps, and to conduct redd surveys at the conclusion of spawning to provide an index of spawning escapement and distribution. The fence was installed on September 9th, 2003 and was operated continuously (i.e. no high-water or breaching events) until the fence was removed on October 9th, 2003. Estimation of the spawning population of White River bull trout was incomplete. This was due to a larger and more protracted out-migration than expected. As a result, the bull trout spawning population of the White River was estimated to be somewhere above 899 fish. In comparison, this represents approximately one third the population estimate of the 2003 Wigwam River bull trout spawning population. Based on redd index data, the number of bull trout per redd was over twice that of the Wigwam River or Skookumchuck Creek. This was expected as the index sites on the Wigwam River and Skookumchuck Creek cover the majority of the spawning area. This is not true on the White River. From previous redd counts, it is known that there are approximately twice as many redds in Blackfoot Creek as there are in the index site. Additionally, given the large size of the White River watershed and in particular, the large number of tributaries, there is a high likelihood that important bull trout spawning areas remain unidentified. Both floy tag and radio-telemetry data for the White River bull trout have identified extensive life history migrations

  14. Monitor and Protect Wigwam River Bull Trout for Koocanusa Reservoir : Summary of the Skookumchuck Creek Bull Trout Enumeration Project Final Report 2000-2002.

    Energy Technology Data Exchange (ETDEWEB)

    Baxter, Jeremy; Baxter, James S.

    2002-12-01

    This report summarizes the third and final year of a bull trout (Salvelinus confluentus) enumeration project on Skookumchuck Creek in southeastern British Columbia. The fence and traps were operated from September 6th to October 11th 2002 in order to enumerate post-spawning bull trout. During the study period a total of 309 bull trout were captured at the fence. In total, 16 fish of undetermined sex, 114 males and 179 females were processed at the fence. Length and weight data, as well as recapture information, were collected for these fish. An additional 41 bull trout were enumerated upstream of the fence by snorkeling prior to fence removal. Coupled with the fence count, the total bull trout enumerated during the project was 350 individuals. Several fish that were tagged in the lower Bull River were recaptured in 2002, as were repeat and alternate year spawners previously enumerated in past years at the fence. A total of 149 bull trout redds were enumerated on the ground in 2002, of which 143 were in the 3.0 km index section (river km 27.5-30.5) that has been surveyed over the past six years. The results of the three year project are summarized, and population characteristics are discussed.

  15. GEOGRAPHICAL DISTRIBUTION OF TROUT FARMING IN TURKEY

    Directory of Open Access Journals (Sweden)

    Güven ŞAHİN

    2011-06-01

    Full Text Available Turkey is a peninsula, surrounded by seas on three sides, with a total coastline of 8.333km. As a result of its heritage from ancient inland living culture, Turkey has a limited development in fishery production. However, there have been significant efforts in developing Trout Farming, compared to the other aquaculture products in Turkey. The recent developments in trout farming in Turkey have led to an increase in trout productions, providing alternatives for public nutrition. This study aims to assess the geographical distribution of trout farming and trout fish consumption in Turkey.

  16. Evaluation of the Life History of Native Salmonids in the Malheur River Basin; Cooperative Bull Trout/Redband Trout Research Project, 1999-2000 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Schwabe, Lawrence; Tiley, Mark (Burns Paiute Tribe, Department of Fish and Wildlife, Burns, OR); Perkins, Raymond R. (Oregon Department of Fish and Wildlife, Ontario, OR)

    2000-11-01

    The purpose of this study is to document the seasonal distribution of adult/sub-adult bull trout (Salvelinus confluentus) in the Malheur River basin. Due to the decline of bull trout in the Columbia Basin, the United States Fish and Wildlife Service listed bull trout as a threatened species in June 1998. Past land management activities; construction of dams; and fish eradication projects in the North Fork and Middle Fork Malheur River by poisoning have worked in concert to cumulatively impact native species in the Malheur Basin (Bowers et. al. 1993). Survival of the remaining bull trout populations is severely threatened (Buchanan 1997). 1999 Research Objects are: (1) Document the migratory patterns of adult/sub-adult bull trout in the North Fork Malheur River; (2) Determine the seasonal bull trout use of Beulah Reservoir and bull trout entrainment; and (3) Timing and location of bull trout spawning in the North Fork Malheur River basin. The study area includes the Malheur basin from the mouth of the Malheur River located near Ontario, Oregon to the headwaters of the North Fork Malheur River (Map 1). All fish collected and most of the telemetry effort was done on the North Fork Malheur River subbasin (Map 2). Fish collection was conducted on the North Fork Malheur River at the tailwaters of Beulah Reservoir (RK 29), Beulah Reservoir (RK 29-RK 33), and in the North Fork Malheur River at Crane Crossing (RK 69) to the headwaters of the North Fork Malheur. Radio telemetry was done from the mouth of the Malheur River in Ontario, Oregon to the headwaters of the North Fork Malheur. This report will reflect all migration data collected from 3/1/99 to 12/31/99.

  17. Does dispersal from landlocked trout explain the coexistence of resident and migratory trout females in a small stream?

    DEFF Research Database (Denmark)

    Pettersson, J.C.E.; Hansen, Michael Møller; Bohlin, T.

    2001-01-01

    The hypothesis that stream-resident females of brown trout Salmo trutta occurring in sympatry with sea-migrant females in a small stream were immigrants from an up-stream allopatric landlocked population was rejected. Genetic differentiation was not detected between the sympatric forms whereas...... the landlocked population into the down-stream population, However. it cannot be precluded that a modest degree of gene Row takes place from the landlocked population and that this may play a role in maintaining the two co-existing life-history forms among females in the down-stream population. (C) 2001...

  18. A nematomorph parasite explains variation in terrestrial subsidies to trout streams in Japan

    Science.gov (United States)

    Sato, Takuya; Watanabe, Katsutoshi; Tokuchi, Naoko; Kamauchi, Hiromitsu; Harada, Yasushi; Lafferty, Kevin D.

    2011-01-01

    Nematomorph parasites alter the behavior of their orthopteran hosts, driving them to water and creating a source of food for stream salmonids. We investigated whether nematomorphs could explain variation in terrestrial subsidies across several streams. In nine study streams, orthopterans comprise much of the stomach contents of trout (46 +/- 31% on average). Total mass of ingested prey per trout biomass positively correlated with the mass of orthopterans ingested, suggesting that the orthopterans enhanced absolute mass of prey consumption by the trout population. The orthopterans ingested per trout biomass positively correlated with the abundance of nematomorphs in the stream, but not with the abundance of camel crickets (the dominant hosts) around the streams. Streams in conifer plantations had fewer nematomorphs than streams in natural deciduous forests. These results provide the first quantitative evidence that a manipulative parasite can explain variation in the allochthonous energy flow through and across ecosystems.

  19. Larger eggs in resident brown trout living in sympatry with anadromous brown trout

    DEFF Research Database (Denmark)

    Olofsson, H.; Mosegaard, Henrik

    1999-01-01

    ) or migratory populations (44.5-121.9 mg), after accounting for differences in body size. In Jorlandaan, some resident females even had a larger absolute mean egg weight than any of the migratory females found in the stream Resident trout had low absolute fecundity, and our data suggest that resident females...... in Jorlandan produce large eggs at the expense of their fecundity The extremely large relative egg size in resident Jorlandaan females suggests that the production of large offspring enhances fitness, possibly through increased fry survival....

  20. Radio-transmitted electromyogram signals as indicators of swimming speed in lake trout and brown trout

    DEFF Research Database (Denmark)

    Thorstad, E.B.; Økland, F.; Koed, Anders

    2000-01-01

    Swimming speed and average electromyogram (EMG) pulse intervals were highly correlated in individual lake trout Salvelinus namaycush (r(2)=0.52-0.89) and brown trout Salmo trutta (r(2)=0.45-0.96). High correlations were found also for pooled data in both lake trout (r(2)=0.90) and brown trout...... of the Ema stock (r(2)=0.96) and Laerdal stock (r(2)=0.96). The linear relationship between swimming speed and average EMG pulse intervals differed significantly among lake trout and the brown trout stocks. This successful calibration of EMGs to swimming speed opens the possibility of recording swimming...

  1. Effects of lake trout refuges on lake whitefish and cisco in the Apostle Islands Region of Lake Superior

    Science.gov (United States)

    Zuccarino-Crowe , Chiara M.; Taylor, William W.; Hansen, Michael J.; Seider, Michael J.; Krueger, Charles C.

    2016-01-01

    Lake trout refuges in the Apostle Islands region of Lake Superior are analogous to the concept of marine protected areas. These refuges, established specifically for lake trout (Salvelinus namaycush) and closed to most forms of recreational and commercial fishing, were implicated as one of several management actions leading to successful rehabilitation of Lake Superior lake trout. To investigate the potential significance of Gull Island Shoal and Devils Island Shoal refuges for populations of not only lake trout but also other fish species, relative abundances of lake trout, lake whitefish (Coregonus clupeaformis), and cisco (Coregonus artedi) were compared between areas sampled inside versus outside of refuge boundaries. During 1982–2010, lake trout relative abundance was higher and increased faster inside the refuges, where lake trout fishing was prohibited, than outside the refuges. Over the same period, lake whitefish relative abundance increased faster inside than outside the refuges. Both evaluations provided clear evidence that refuges protected these species. In contrast, trends in relative abundance of cisco, a prey item of lake trout, did not differ significantly between areas inside and outside the refuges. This result did not suggest indirect or cascading refuge effects due to changes in predator levels. Overall, this study highlights the potential of species-specific refuges to benefit other fish species beyond those that were the refuges' original target. Improved understanding of refuge effects on multiple species of Great Lakes fishes can be valuable for developing rationales for refuge establishment and predicting associated fish community-level effects.

  2. Life+ Trout Project (LIFE12 NAT/IT/0000940 for the recovery and conservation of Mediterranean trout (Salmo trutta complex in the central Apennines (Italy.

    Directory of Open Access Journals (Sweden)

    Vincenzo Caputo Barucchi

    2015-11-01

    At present the genetic and demographic characterization of the trout populations is completed. Table 1 and Figures 1-2 show the results of abundance analysis of the fish assemblages divided by basin. The standing crop’s mean values can be considered in the standard range, according to the small size and the limited productivity that generally characterized the watercourses analyzed, as most of the Apennine rivers. The differences of the mean values among basins were highly statistically significant according to the ANOVA analysis (density: F= 5.24, p=0.001; standing crop: F=12.42, p=0.001. The results of genetic analysis separated clearly native and aliene genomes (K = 2, Fig. 3a and showed the presence of three distinct genetic stocks of native Apennine trout (K = 4, Fig. 3b: i Tevere (green bars, ii Tenna (red and iii Chienti /Potenza/Metauro/Esino (yellow. Populations characterized by very low introgression values will be the source of wild individuals to produce pure juvenile trouts in captivity. Four moderately introgressed populations will be subject to supportive breeding activities. Finally, six stream, where trouts showed almost exclusively an alien genetic make-up will be selected for the eradication activities. The data collected are the indispensable premise for the adoption of the necessary strategies for conservation of the Apennine trout in Central Italy.

  3. SUPPLEMENTAL STOCKING OF EYED BROWN TROUT EGGS (SALMO TRUTTA M. FARIO L., 1758 WITH THE USE OF WHITLOCK–VIBERT BOXES

    Directory of Open Access Journals (Sweden)

    Manuela Turković

    2006-07-01

    Full Text Available The research was carried out in the Upper Kupa valley at three different locations–brooks, Lešnički potok, Lešnički jarak and Grčac. During the research efficiency of stocking with Whitlock Vibert boxes were studied. During the three month research period (January 2005 — April 2005 4000 eyed brown trout eggs from 3 different sources were placed in 14 Whitlock–Vibert boxes. During the research resultes from Grčac brook were excluded from the final analysis of efficiency of Whitlock–Vibert boxes because of technical problems, so resultes for the final analysis were used from 2800 eyed brown trout eggs that were placed in 10 Whitlock–Vibert boxes where 99,53% of the eggs had successfully hatched. The results have shown that the use of Whitlock–Vibert boxes with eyed brown trout eggs is prosperous and that the efficiency of Whitlock–Vibert boxes depends on the quality of eggs and choice of box burial in the stream bed. The research was conducted in the context of the regular management obligations of the fishing right owner on the research area.

  4. Cleanth Brooks at the United States Air Force Academy April 11-12, 1978,

    Science.gov (United States)

    1980-01-01

    April 1966. The Writer and His Community. Glasgow: Jackson , 1968. The Twenty-First W. P. Fer Memorial Lecture delivered in the University of Glasgow...Brooks & Warren. N. Y.: Crofts 119431. The Correspondence of Thomas Percy . General Editors, David Nichol Smith & Brooks. 5 vols. Baton Rouge: LSU Press...1944-57. Brooks edited vol. 11, The Correspondence of Thomas Percy and Richard Farmer [19461. Understanding Drama. By Brooks & Robert B. Heilman. N

  5. Aerospace medicine at Brooks AFB, TX: hail and farewell.

    Science.gov (United States)

    Nunneley, Sarah A; Webb, James T

    2011-05-01

    With the impending termination of USAF operations at Brooks Air Force Base (AFB) in San Antonio, TX, it is time to consider its historic role in Aerospace Medicine. The base was established in 1917 as a flight training center for the U.S. Army Air Service and in 1926 became home to its School of Aviation Medicine. The school moved to San Antonio's Randolph Field in 1931, but in 1959 it returned to Brooks where it occupied new facilities to support its role as a national center for U.S. Air Force aerospace medicine, including teaching, clinical medicine, and research. The mission was then expanded to encompass support of U.S. military and civilian space programs. With the abrupt termination of the military space program in 1969, research at Brooks focused on clinical aviation medicine and support of advanced military aircraft while continuing close cooperation with NASA in support of orbital spaceflight and the journey to the Moon. Reorganization in the 1990s assigned all research functions at Brooks to the Human Systems Division and its successors, leaving to USAFSAM the missions related to clinical work and teaching. In 2002 the USAF and the city of San Antonio implemented shared operation of Brooks as a "City-Base" in the hope of deflecting threatened closure. Nevertheless, under continuing pressure to consolidate military facilities in the United States, the 2005 Base Closure and Realignment Commission ordered Brooks closed by 2011, with its aerospace medicine functions relocated to new facilities at Wright-Patterson AFB in Dayton, OH.

  6. Endoparasites of plethodontid salamanders from Paradise Brook, New Hampshire.

    Science.gov (United States)

    Muzzall, P M; Peebles, C R; Burton, T M

    1997-12-01

    Totals of 52 dusky salamanders Desmognathus fuscus, 51 two-lined salamanders Eurycea bislineata, 54 red-backed salamanders Plethodon cinereus, and 3 spring salamanders Gyrinophilus porphyriticus (Plethodontidae) collected in June and August 1995 from Paradise Brook, a tributary to Hubbard Brook, New Hampshire, were examined for parasites. Parasites found were Brachycoelium storeriae, Brachycoelium sp., Bothriocephalus rarus, Falcaustra sp., Omeia sp., Batracholandros magnavulvaris, and Cepedietta michiganensis. Eighty-six percent of the red-backed salamanders, a terrestrial species, harbored 1 or more parasites. Among the aquatic and semiaquatic species, 27% of the dusky and 45% of the two-lined salamanders were infected with 1 or more parasites.

  7. Mujeres malditas pintadas de gris : el arte de Romaine Brooks

    OpenAIRE

    Serrano de Haro, Amparo

    1994-01-01

    A pesar de su morbosa elegancia y fatídica sensualidad, los retratos de Romaine Brooks, grises como la nostalgia, son aceptados y considerados dignos de atención crítica desde hace muy poco tiempo. Romaine Brooks,norteamericana nacida en Roma en 1874, cuyas pinturas gozaron de una gran popularidad en el París de principios de siglo XX, fue prácticamente olvidada a partir de los años treinta. La donación de buena parte de su obra al Museo Nacional de Washington a fines de los...

  8. Effects of different water qualities on the early development of Atlantic salmon and brown trout exposed in situ

    Energy Technology Data Exchange (ETDEWEB)

    Norrgren, L. (Swedish Univ. of Agricultural Sciences, Uppsala (Sweden). Dept. of Pathology); Degerman, E. (Inst. of Freshwater Research, Drottningholm (Sweden))

    1993-01-01

    Early developmental stages of Atlantic salmon and brown trout were exposed in situ to different water qualities in a river affected by acidification and wetland liming. Mortality, hatching frequency, histopathology and whole-body electrolytes were investigated. The hatching frequency was low in acidic aluminium-rich water, and the whole-body concentration of potassium and sodium decreased as early as after 13 days of exposure. Prolonged exposure caused 100% mortality of Atlantic salmon at this locality. A histochemical study disclosed Al precipitates in the gills of fish exposed to the acidic brooks. The precipitates were associated with the apical plasma membrane, and were also occasionally present intracellularly. The latter observation was confirmed by ultrastructural studies in which electron-dense precipitates were found in the cytoplasm of chloride cells. Chorions from non- to incompletely hatched eggs exposed in the acidic part of Torskabaecken were compared with the chorions from fry hatched in the limed part of the same brook. Eggs which failed to hatch had an intact inner chorion surface. Atlantic salmon were more sensitive to acidic Al-rich waters than brown trout, both at hatching and as yolksac fry. Wetland liming effectively protected salmonid fish reproducing in such waters. (27 refs., 13 figs., 1 tab.)

  9. Clarification to Brook and Willoughby (2016).

    Science.gov (United States)

    2016-07-01

    Reports an error in "Social anxiety and alcohol use across the university years: Adaptive and maladaptive groups" by Christina A. Brook and Teena Willoughby (Developmental Psychology, 2016[May], Vol 52[5], 835-845). In the article, Figures 1 and 2 and Tables 1, 2, 3, and 4 were inadvertently designated as supplemental material. The figures and tables are present in the erratum. (The following abstract of the original article appeared in record 2016-13161-001.) University/college can be a challenging time as students face developmental tasks such as building new social networks and achieving academically. Social anxiety may be disadvantageous in this setting given that social situations often include drinking and individuals with social anxiety tend to self-medicate through alcohol use. However, findings are mixed as to whether the association between social anxiety and alcohol use is positive or negative. To clarify the nature of this association, we used a person-centered longitudinal analysis to identify student groups based on levels of social anxiety symptoms and alcohol consumption. Undergraduates (N = 1132, 70.5% female, Mage = 19.06 at Time 1) enrolled in university completed a survey assessing social anxiety and alcohol use over 3 years, and psychosocial functioning and emotion coping behaviors at Time 1. Two out of 5 groups were identified with higher levels of social anxiety, 1 with moderately low alcohol use, and the other with moderately high alcohol use. Both groups reported higher levels of general anxiety, depressive symptoms, behavioral inhibition, emotional reactivity, daily hassles, and lower levels of social ties at Time 1 than the 3 groups with lower levels of social anxiety. Furthermore, the social anxiety-alcohol use group reported significantly lower academic grades and was more likely to endorse problematic emotion coping behaviors (e.g., self-injury) than the social anxiety-low alcohol use group. These results not only help explain the

  10. Assessing the impact of swimming exercise and the relative susceptibility of rainbow trout oncorhynchus mykiss (walbaum) and atlantic salmon salmo salar L. following injection challenge with weissella ceti

    Science.gov (United States)

    All-female rainbow trout and mixed-sex Atlantic salmon (approximately 200 g and 120 g initial weight, respectively) were maintained in small circular tanks in a flow-through system under study conditions for a period of five months. The four tank populations consisted of rainbow trout exposed to ei...

  11. Radio-transmitted electromyogram signals as indicators of swimming speed in lake trout and brown trout

    DEFF Research Database (Denmark)

    Thorstad, E.B.; Økland, F.; Koed, Anders

    2000-01-01

    Swimming speed and average electromyogram (EMG) pulse intervals were highly correlated in individual lake trout Salvelinus namaycush (r(2)=0.52-0.89) and brown trout Salmo trutta (r(2)=0.45-0.96). High correlations were found also for pooled data in both lake trout (r(2)=0.90) and brown trout...... of the Ema stock (r(2)=0.96) and Laerdal stock (r(2)=0.96). The linear relationship between swimming speed and average EMG pulse intervals differed significantly among lake trout and the brown trout stocks. This successful calibration of EMGs to swimming speed opens the possibility of recording swimming...... speed of free swimming lake trout and brown trout in situ. EMGs can also be calibrated to oxygen consumption to record energy expenditure. (C) 2000 The Fisheries Society of the British Isles...

  12. Review of potential interactions between stocked rainbow trout and listed Snake River sockeye salmon in Pettit Lake Idaho

    Energy Technology Data Exchange (ETDEWEB)

    Teuscher, D.

    1996-05-01

    The objective of this study was to determine if hatchery rainbow trout compete with or prey on juvenile Snake River sockeye salmon Oncorhynchus nerka in Pettit Lake, Idaho. In 1995, a total of 8,570 age-0 sockeye and 4,000 hatchery rainbow trout were released in Pettit Lake. After releasing the fish, gillnets were set in the pelagic and littoral zones to collected diet and spatial distribution data. Interactions were assessed monthly from June 1995 through March 1996. Competition for food was discounted based on extremely low diet overlap results observed throughout the sample period. Conversely, predation interactions were more significant. A total of 119 rainbow trout stomachs were analyzed, two contained O. nerka. The predation was limited to one sample period, but when extrapolated to the whole rainbow trout populations results in significant losses. Total consumption of O. nerka by rainbow trout ranged from an estimated 10 to 23% of initial stocking numbers. Predation results contradict earlier findings that stocked rainbow trout do not prey on wild kokanee or sockeye in the Sawtooth Lakes. The contradiction may be explained by a combination of poorly adapted hatchery sockeye and a littoral release site that forced spatial overlap that was not occurring in the wild populations. Releasing sockeye in the pelagic zone may have reduced or eliminated predation losses to rainbow trout.

  13. HABITAT USE BY NATIVE AND STOCKED TROUT (SALMO TRUTTA L. IN TWO NORTHEAST STREAMS, PORTUGAL

    Directory of Open Access Journals (Sweden)

    TEIXEIRA A.

    2006-04-01

    Full Text Available Habitat use by stocked and native brown trout (Salmo trutta L. was assessed in two headwater streams of North-eastern Portugal. Underwater observations were made during the summer season in three successive years to evaluate the effect of supplemental trout stocking. Multivariate analysis techniques applied to data sets on microhabitat use were exploited to identify the focal elevation (distance of fish from the bottom, total depth and cover as the variables that contribute most to the discrimination between stocked and native trout. Preference curves computed for native and stocked trout of the same age (1+, showed a distinct pattern in their ability to explore the available microhabitat resources. Stocked trout tended to occupy deeper pools (total depth > 100 cm vs. 60-100 cm for native trout, holding higher focal elevations (140-160 cm vs. 22.5 cm and cover (combination of boulders and overhanging vegetation or undercut banks. Furthermore, a high poststocking movement of 80% hatchery-reared fish was verified just one month after their release, suggesting that stocking did not contribute to the sustainable populations in either stream, and is far from being an adequate management technique.

  14. Trophic ecology of northern pike and their effect on conservation of westslope cutthroat trout.

    Science.gov (United States)

    Walrath, John D.; Quist, Michael; Firehammer, Jon A.

    2015-01-01

    Westslope Cutthroat Trout Oncorhynchus clarkii lewisi in Coeur d’Alene Lake, Idaho, have declined in recent years; predation by Northern Pike Esox lucius, a nonnative sport fish, is thought to be a causative mechanism. The goal of this study was to describe the seasonal food habits of Northern Pike and determine their influence on Westslope Cutthroat Trout in Coeur d’Alene Lake by using a bioenergetics modeling approach. Fish were sampled monthly from March 2012 to May 2013 using pulsed-DC electrofishing and experimental gillnetting in four bays. Northern Pike catch rates from electrofishing were generally low but increased slightly each season and were highest in the southern portion of the lake; catch rates from gillnetting were approximately 50% higher during the two spring sampling periods compared with the summer and fall. Seasonal growth and food habits of 695 Northern Pike (TL = 16.2–108.0 cm; weight = 24–9,628 g) were analyzed. Diets primarily consisted of kokanee O. nerka, Westslope Cutthroat Trout, and Yellow PerchPerca flavescens. Results of a bioenergetics model estimated that Westslope Cutthroat Trout represented approximately 2–30% of the biomass consumed by age-1–4 Northern Pike. Total Westslope Cutthroat Trout biomass consumed by Northern Pike (2008–2011 year-classes) across all seasons sampled was estimated to be 1,231 kg (95% CI = 723–2,396 kg), and the total number consumed was 5,641 (95% CI = 3,311–10,979). The highest occurrence of Westslope Cutthroat Trout in Northern Pike diets was observed during spring. Thus, reducing Northern Pike predation on Westslope Cutthroat Trout would be one tool worth considering for conserving Westslope Cutthroat Trout populations in Coeur d’Alene Lake.

  15. Feasibility of target communities in a Dutch brook valley system

    NARCIS (Netherlands)

    Prins, AH; Bekker, RM

    As a reaction to the ongoing deterioration of nature conservation interest in The Netherlands, an offensive nature strategy was formulated in the 1990 Nature Policy Plan. In this Plan, target communities and target plant species are mentioned. For the 'Drentse A brook valley system', target

  16. Feasibility of target communities in a Dutch brook valley system

    NARCIS (Netherlands)

    Prins, AH; Bekker, RM

    1998-01-01

    As a reaction to the ongoing deterioration of nature conservation interest in The Netherlands, an offensive nature strategy was formulated in the 1990 Nature Policy Plan. In this Plan, target communities and target plant species are mentioned. For the 'Drentse A brook valley system', target communit

  17. Patterns of streamwater acidity in Lye Brook Wilderness, Vermont, USA

    Science.gov (United States)

    John L. Campbell; Christopher Eagar; William H. McDowell

    2002-01-01

    Under the United States Clean Air Act Amendments of 1977, a class I designation safeguards wilderness areas from the negative effects of new sources of air pollution. We monitored streamwater chemistry in the class I Lye Brook Wilderness in southwestern Vermont from May 1994 through August 1995. Stream samples were collected biweekly at nine sampling locations...

  18. Documentary Linguistics and Computational Linguistics: A Response to Brooks

    Science.gov (United States)

    Bird, Steven; Chiang, David; Frowein, Friedel; Hanke, Florian; Vaswani, Ashish

    2015-01-01

    In mid-2012, the authors organized a two-week workshop in Papua New Guinea to provide training in basic techniques and technologies for language documentation, and to gain understanding of how these technologies might be improved in the future. An assessment of the workshop was conducted by Brooks with the central idea that the workshop's…

  19. Biology, status, and management of the yellowstone cutthroat trout

    Science.gov (United States)

    Gresswell, R.E.

    2011-01-01

    Yellowstone cutthroat trout Oncorhynchus clarkii bouvieri were historically distributed in the Yellowstone River drainage (Montana and Wyoming) and the Snake River drainage (Wyoming, Idaho, Utah, Nevada, and probably Washington). Individual populations evolved distinct life history characteristics in response to the diverse environments in which they were isolated after the last glaciation. Anthropogenic activities have resulted in a substantial decline (42% of the historical range is currently occupied; 28% is occupied by core [genetically unaltered] populations), but the number of extant populations, especially in headwater streams, has precluded listing of this taxon under the Endangered Species Act. Primary threats to persistence of Yellowstone cutthroat trout include (1) invasive species, resulting in hybridization, predation, disease, and interspecific competition; (2) habitat degradation from human activities such as agricultural practices, water diversions, grazing, dam construction, mineral extraction, grazing, timber harvest, and road construction; and (3) climate change, including an escalating risk of drought, wildfire, winter flooding, and rising temperatures. Extirpation of individual populations or assemblages has led to increasing isolation and fragmentation of remaining groups, which in turn raises susceptibility to the demographic influences of disturbance (both human and stochastic) and genetic factors. Primary conservation strategies include (1) preventing risks associated with invasive species by isolating populations of Yellowstone cutthroat trout and (2) connecting occupied habitats (where possible) to preserve metapopulation function and the expression of multiple life histories. Because persistence of isolated populations may be greater in the short term, current management is focused on isolating individual populations and restoring habitats; however, this approach implies that humans will act as dispersal agents if a population is

  20. Status and conservation of interior Redband Trout in the western United States

    Science.gov (United States)

    Muhlfeld, Clint C.; Albeke, Shannon E.; Gunckel, Stephanie L; Writer, Benjamin J; Shepard, Bradley B.; May, Bruce E

    2015-01-01

    In this article we describe the current status and conservation of interior (potamodromous) Redband Trout Oncorhynchus mykiss sspp. throughout its range in the western United States using extant data and expert opinion provided by fish managers. Redband Trout historically occupied 60,295 km of stream habitat and 152 natural lakes. Currently, Redband Trout occupy 25,417 km of stream habitat (42% of their historical range) and 124 lakes or reservoirs. Nonhybridized populations are assumed to occupy 11,695 km (46%) of currently occupied streams; however, fish from only 4,473 km (18%) have been genetically tested. Approximately 47% of the streams occupied by Redband Trout occur on private land, 45% on government lands, and 8% in protected areas. A total of 210 Redband Trout populations, occupying 15,252 km of stream habitat (60% of the current distribution) and 95,158 ha of lake habitat (52%), are being managed as “conservation populations.” Most conservation populations have been designated as weakly to strongly connected metapopulations (125; 60%) and occupy much more stream length (14,112 km; 93%) than isolated conservation populations (1,141 km; 7%). The primary threats to Redband Trout include invasive species, habitat degradation and fragmentation, and climate change. Although the historical distribution of interior Redband Trout has declined dramatically, we conclude that the species is not currently at imminent risk of extinction because it is still widely distributed with many populations isolated by physical barriers and active conservation efforts are occurring for many populations. However, the hybridization status of many populations has not been well quantified, and introgression may be more prevalent than documented here. We recommend (1) collecting additional genetic data and estimating distribution and abundance by means of a more rigorous spatial sampling design to reduce uncertainties, (2) collecting additional information to assess and

  1. Use of cover habitat by bull trout Salvelinus confluentus and lake trout Salvelinus namaycush in a laboratory environment

    Science.gov (United States)

    Meeuwig, Michael H.; Guy, Christopher S.; Fredenberg, Wade A.

    2011-01-01

    Lacustrine-adfluvial bull trout, Salvelinus confluentus, migrate from spawning and rearing streams to lacustrine environments as early as age 0. Within lacustrine environments, cover habitat pro- vides refuge from potential predators and is a resource that is competed for if limiting. Competitive inter- actions between bull trout and other species could result in bull trout being displaced from cover habitat, and bull trout may lack evolutionary adaptations to compete with introduced species, such as lake trout, Salvelinus namaycush. A laboratory experiment was performed to examine habitat use and interactions for cover by juvenile (i.e., bull trout and lake trout. Differences were observed between bull trout and lake trout in the proportion of time using cover (F1,22.6=20.08, Pbull trout using cover and bottom habitats more than lake trout. Habitat selection ratios indicated that bull trout avoided water column habitat in the presence of lake trout and that lake trout avoided bottom habitat. Intraspecific and interspecific agonistic interactions were infrequent, but approximately 10 times greater for intraspecific inter- actions between lake trout. Results from this study provide little evidence that juvenile bull trout and lake trout compete for cover, and that species-specific differences in habitat use and selection likely result in habitat partitioning between these species.

  2. Evaluation of offshore stocking of Lake Trout in Lake Ontario

    Science.gov (United States)

    Lantry, B.F.; O'Gorman, R.; Strang, T.G.; Lantry, J.R.; Connerton, M.J.; Schanger, T.

    2011-01-01

    Restoration stocking of hatchery-reared lake trout Salvelinus namaycush has occurred in Lake Ontario since 1973. In U.S. waters, fish stocked through 1990 survived well and built a large adult population. Survival of yearlings stocked from shore declined during 1990–1995, and adult numbers fell during 1998–2005. Offshore stocking of lake trout was initiated in the late 1990s in response to its successful mitigation of predation losses to double-crested cormorants Phalacrocorax auritus and the results of earlier studies that suggested it would enhance survival in some cases. The current study was designed to test the relative effectiveness of three stocking methods at a time when poststocking survival for lake trout was quite low and losses due to fish predators was a suspected factor. The stocking methods tested during 2000–2002 included May offshore, May onshore, and June onshore. Visual observations during nearshore stockings and hydroacoustic observations of offshore stockings indicated that release methods were not a direct cause of fish mortality. Experimental stockings were replicated for 3 years at one site in the southwest and for 2 years at one site in the southeast. Offshore releases used a landing craft to transport hatchery trucks from 3 to 6 km offshore out to 55–60-m-deep water. For the southwest site, offshore stocking significantly enhanced poststocking survival. Among the three methods, survival ratios were 1.74 : 1.00 : 1.02 (May offshore : May onshore : June onshore). Although not statistically significant owing to the small samples, the trends were similar for the southeast site, with survival ratios of 1.67 : 1.00 : 0.72. Consistent trends across years and sites indicated that offshore stocking of yearling lake trout during 2000–2002 provided nearly a twofold enhancement in survival; however, this increase does not appear to be great enough to achieve the 12-fold enhancement necessary to return population abundance to restoration

  3. 不同群体山女鳟及其杂交F1的生产性能比较%Production Performance of Different Populations of Rainbow Trout Oncorhynchus masou masou and Their Cross-breeding F1

    Institute of Scientific and Technical Information of China (English)

    张玉勇; 张永泉; 贾智英; 贾忠贺; 白庆利

    2013-01-01

    本文系统研究了我国引进的两个山女鳟(Oncorhynchus masou masou)群体及其杂交F1代的生产性能.结果表明,(1)两个杂交组合的早期生产性能,如授精率、发眼率和孵化率等不存在显著优势,自交组合BH 08♀×BH08♂的最终成活率为63.37%,远低于其他三组的成活率(P<0.01);(2)378d的生长对比试验表明,杂交组合与自交组合的体质量、绝对增重率、特定生长率和肥满度等存在一定差异,养殖时间对这些指标的影响达到极显著水平(P<0.01),但组间差异仅为显著水平(P<0.05)或没有差异(P>0.05);(3)378d的生长对比试验结束时,两个杂交组合均表现出一定的杂种优势.方差分析表明,不同生长阶段对杂交组合杂种优势率的影响极显著(P<0.01),不同组合间的杂种优势率也存在极显著差异(P<0.01).%In this paper, the production performance were studied in two populations of rainbow trout Oncorhynchus masou masou and their cross-breeding Fl. The results showed that firstly there were no significant differences in production performance including fertil ization, eyed embryonic rate, and hatching success between the cross-breeding F1 (BH 96 9 ♀×BH 08 6 and BH 08 9 ♂ BH 96 5 ) and the controls (BH 96 ♀× BH 96 6 and BH 08 9 × BH 08 5 (P>0.05), with survival rate of only 63.3% in BH 08 9 ♀× BH 08 ♂ , very significantly lower than in the others (P0.05 ).Thirdly after a 378-day experi ment the cross-breeding Fl appeared some growth heterosis. The analysis of variance showed that the heterosis difference was affected not only by culture-time, but also among different groups (P<0.01).

  4. Seasonal and spatial patterns of growth of rainbow trout in the Colorado River in Grand Canyon, AZ

    Science.gov (United States)

    Yard, Micheal D.; Korman, Josh; Walters, Carl J.; Kennedy, T.A.

    2016-01-01

    Rainbow trout (Oncorhynchus mykiss) have been purposely introduced in many regulated rivers, with inadvertent consequences on native fishes. We describe how trout growth rates and condition could be influencing trout population dynamics in a 130 km section of the Colorado River below Glen Canyon Dam based on a large-scale mark–recapture program where ∼8000 rainbow trout were recaptured over a 3-year period (2012–2014). There were strong temporal and spatial variations in growth in both length and weight as predicted from von Bertalanffy and bioenergetic models, respectively. There was more evidence for seasonal variation in the growth coefficient and annual variation in the asymptotic length. Bioenergetic models showed more variability for growth in weight across seasons and years than across reaches. These patterns were consistent with strong seasonal variation in invertebrate drift and effects of turbidity on foraging efficiency. Highest growth rates and relative condition occurred in downstream reaches with lower trout densities. Results indicate that reduction in rainbow trout abundance in Glen Canyon will likely increase trout size in the tailwater fishery and may reduce downstream dispersal into Grand Canyon.

  5. VT Foote Brook Macroinvertebrate Biomonitoring - Phase I

    Data.gov (United States)

    Vermont Center for Geographic Information — (Link to Metadata) 79% similar to the reference stream, then it is in a non-impaired state, reflecting a good population of pollution intolerant organisms and good...

  6. VT Foote Brook Macroinvertebrate Biomonitoring - Phase II

    Data.gov (United States)

    Vermont Center for Geographic Information — (Link to Metadata) 79% similar to the reference stream, then it is in a non-impaired state, reflecting a good population of pollution intolerant organisms and good...

  7. Temporary Restoration of Bull Trout Passage at Albeni Falls Dam

    Energy Technology Data Exchange (ETDEWEB)

    Paluch, Mark; Scholz, Allan; McLellan, Holly [Eastern Washington University Department of Biology; Olson, Jason [Kalispel Tribe of Indians Natural Resources Department

    2009-07-13

    This study was designed to monitor movements of bull trout that were provided passage above Albeni Falls Dam, Pend Oreille River. Electrofishing and angling were used to collect bull trout below the dam. Tissue samples were collected from each bull trout and sent to the U. S. Fish and Wildlife Service Abernathy Fish Technology Center Conservation Genetics Lab, Washington. The DNA extracted from tissue samples were compared to a catalog of bull trout population DNA from the Priest River drainage, Lake Pend Oreille tributaries, and the Clark Fork drainage to determine the most probable tributary of origin. A combined acoustic radio or radio tag was implanted in each fish prior to being transported and released above the dam. Bull trout relocated above the dam were able to volitionally migrate into their natal tributary, drop back downstream, or migrate upstream to the next dam. A combination of stationary radio receiving stations and tracking via aircraft, boat, and vehicle were used to monitor the movement of tagged fish to determine if the spawning tributary it selected matched the tributary assigned from the genetic analysis. Seven bull trout were captured during electrofishing surveys in 2008. Of these seven, four were tagged and relocated above the dam. Two were tagged and left below the dam as part of a study monitoring movements below the dam. One was immature and too small at the time of capture to implant a tracking tag. All four fish released above the dam passed by stationary receivers stations leading into Lake Pend Oreille and no fish dropped back below the dam. One of the radio tags was recovered in the tributary corresponding with the results of the genetic test. Another fish was located in the vicinity of its assigned tributary, which was impassable due to low water discharge at its mouth. Two fish have not been located since entering the lake. Of these fish, one was immature and not expected to enter its natal tributary in the fall of 2008. The other

  8. Lice pressure from salmon farms on wild sea trout (Salmo trutta in a Norwegian fjord

    Directory of Open Access Journals (Sweden)

    Pablo Arechavala-Lopez

    2015-11-01

    Full Text Available Salmon lice Lepeophtheirus salmonis are external parasites on salmonids in the marine environment. However, during recent years, salmon lice abundance has increased due to the presence of salmon farming. Scientific studies shows that salmon farming increases the abundance of lice in the marine habitat and that salmon lice in the most intensively farmed areas have negatively affected wild fish populations. The present study assesses the spatiotemporal distribution of salmon lice infestations on wild sea trout population in the Romsdalsfjord region (Norway, and the potential relationship with fish-farming activity and environmental parameters in this area. Salmon lice at farms varied among localities or farming areas, although infestation levels were under the safety established thresholds (max: 0.5 adult females per fish in most of the cases. However, salmon farms with these levels might produce and release millions of copepods, potentially infecting wild salmonids. In accordance, low lice loads were recorded on wild sea trout captured in areas with low farming activity, while higher mean loads were recorded in areas with higher farming activity. A clear seasonal pattern and a positive correlation between lice on sea trout and sea water temperature were observed throughout the study period. The estimated production of copepods at farms and the mobile lice counted on wild sea trout one month later were correlated, suggesting the potential use of lice monitoring on sea trout as a proxy indicator of salmon lice infestation risks.

  9. Farming of Freshwater Rainbow Trout in Denmark

    DEFF Research Database (Denmark)

    Jokumsen, Alfred; Svendsen, Lars Moeslund

    Textbook on Farming of Freshwater Rainbow Trout in Denmark. Danish edition with the title: Opdræt af regnbueørred i Danmark......Textbook on Farming of Freshwater Rainbow Trout in Denmark. Danish edition with the title: Opdræt af regnbueørred i Danmark...

  10. Farming of Freshwater Rainbow Trout in Denmark

    DEFF Research Database (Denmark)

    Jokumsen, Alfred; Svendsen, Lars Moeslund

    Textbook on Farming of Freshwater Rainbow Trout in Denmark. Danish edition with the title: Opdræt af regnbueørred i Danmark......Textbook on Farming of Freshwater Rainbow Trout in Denmark. Danish edition with the title: Opdræt af regnbueørred i Danmark...

  11. Wigwam River Juvenile Bull Trout and Fish Habitat Monitoring Program : 2001 Data Report.

    Energy Technology Data Exchange (ETDEWEB)

    Cope, R.S.; Morris, K.J.; Bisset, J.E.

    2002-03-01

    The Wigwam River juvenile bull trout and fish habitat monitoring program is a co-operative initiative of the British Columbia Ministry of Water, Land, and Air Protection and Bonneville Power Administration. The Wigwam River has been characterized as the single most important bull trout spawning stream in the Kootenay Region. This report provides a summary of results obtained during the second year (2001) of the juvenile bull trout enumeration and fish habitat assessment program. This project was commissioned in planning for fish habitat protection and forest development within the upper Wigwam River valley. The broad intent is to develop a better understanding of juvenile bull trout and Westslope cutthroat trout recruitment and the ongoing hydrologic and morphologic processes in the upper Wigwam River, especially as they relate to spawning and rearing habitat quality. Five permanent sampling sites were established August 2000 in the Wigwam river drainage (one site on Bighorn Creek and four sites on the mainstem Wigwam River). At each site, juvenile (0{sup +}, 1{sup +} and 2{sup +} age classes) fish densities and stream habitat conditions were measured over two stream meander wavelengths. Bull trout represented 95.1% of the catch and the mean density of juvenile bull trout was estimated to be 20.7 fish/100m{sup 2} (range 0.9 to 24.0 fish/100m{sup 2}). This compares to 17.2 fish/100m{sup 2} (+20%) for the previous year. Fry (0{sup +}) dominated the catch and this was a direct result of juvenile bull trout ecology and habitat partitioning among life history stages. Site selection was biased towards sample sites which favored high bull trout fry capture success. Comparison of fry density estimates replicated across both the preliminary survey (1997) and the current study (Cope and Morris 2001) illustrate the stable nature of these high densities. Bull trout populations have been shown to be extremely susceptible to habitat degradation and over-harvest and are

  12. Mujeres malditas pintadas de gris : el arte de Romaine Brooks

    Directory of Open Access Journals (Sweden)

    Amparo Serrano de Haro

    1994-01-01

    Full Text Available A pesar de su morbosa elegancia y fatídica sensualidad, los retratos de Romaine Brooks, grises como la nostalgia, son aceptados y considerados dignos de atención crítica desde hace muy poco tiempo. Romaine Brooks,norteamericana nacida en Roma en 1874, cuyas pinturas gozaron de una gran popularidad en el París de principios de siglo XX, fue prácticamente olvidada a partir de los años treinta. La donación de buena parte de su obra al Museo Nacional de Washington a fines de los años 60 y la exposición antológica de su obra en 1971 (un año después de su muerte, iniciaron lo que sería un proceso de recuperación de su figura y su pintura.

  13. Bath vaccination of rainbow trout against yersiniosis

    DEFF Research Database (Denmark)

    Raida, Martin Kristian; Buchmann, Kurt

    2007-01-01

    Studies have been conducted on the temperature-dependent effect of bath vaccination of rainbow trout against Yersinia ruckeri O1. Protection of rainbow trout fry against challenge, following bath vaccination with a bacterin of Yersinia ruckeri O1, the bacterial pathogen causing enteric red mouth...... disease (ERM), was investigated at 5, 15 and 25° C. Rainbow trout fry were kept at controlled temperatures for two month before they were immersed in a commercial Yersinia ruckeri O1 bacterin for 10 minutes. Control groups were sham vaccinated using pure water. Fish were challenged with Yersinia ruckeri O......1 one and two month post vaccination at the three temperatures. Protection of vaccinated fish was seen one and two month post vaccination in rainbow trout reared at 15° C. There was no effect of vaccination in rainbow trout reared at 5 and 25° C. Spleen tissue was sampled from 5 vaccinated and 5...

  14. BROOKS GLYCERINE 10缓震基因

    Institute of Scientific and Technical Information of China (English)

    中底为王

    2012-01-01

    在跑鞋品牌里要论谁最具专业科技性,身为“四大跑鞋品牌”之一的BROOKS 相信是很多跑步迷心中的首选。2011年BROOKS推出了极具创新精神的中底缓震技术DNA,为整个跑步界投下了重磅炸弹,

  15. A geologic framework for mineralization in the western Brooks Range

    Science.gov (United States)

    Young, Lorne E.

    2004-01-01

    The Brooks Range is a 950-km-long north-vergent fold and thrust belt, which was formed during Mesozoic convergence of the continental Arctic Alaska terrane and the oceanic Angayucham terrane and was further shortened and uplifted in Tertiary time. The Arctic Alaska terrane consists of parautochthonous rocks and the Endicott Mountains and De Long Mountains subterranes. The Endicott Mountains allochthon of the western Brooks Range is the setting for many sulfide and barite occurrences, such as the supergiant Red Dog zinc-lead mine. Mineralization is sediment hosted and most commonly is present in black shale and carbonate turbidites of the Mississippian Kuna Formation. The reconstructed Kuna basin is a 200 by +600 km feature that represents the culmination of a remarkable chain of events that includes three fluvial-deltaic and two or more orogenic cycles, Middle Devonian to Mississippian episodes of extension and igneous activity, and the emergence of a seaward Lower Proterozoic landmass that may have constituted a barrier to marine circulation. Mississippian extension and related horst-and-graben architecture in the western Brooks Range is manifested in part by strong facies variability between coeval units of allochthons and structural plates. Shallow marine to possibly nonmarine arkose, platform to shelf carbonate, slope-to-basin shale, chert and carbonate turbidites, and submarine volcanic rocks are all represented in Mississippian time. The structural setting of Mississippian sedimentation, volcanism, and mineralization in the Kuna basin may be comparable to documented Devono-Mississippian extensional sags or half-grabens in the subsurface north of the Brooks Range. Climate, terrestrial ecosystems, multiple fluvial-deltaic aquifers, and structural architecture affected the liberation, movement, and redeposition of metals in ways that are incompletely understood.

  16. Comparative transcriptomics of anadromous and resident brook charr Salvelinus fontinalis before their first salt water transition

    Directory of Open Access Journals (Sweden)

    Marylène BOULET, Éric NORMANDEAU, Bérénice BOUGAS, Céline AUDET,Louis BERNATCHEZ

    2012-02-01

    Full Text Available Most salmonid taxa have an anadromous life history strategy, whereby fish migrate to saltwater habitats for a growth period before returning to freshwater habitats for spawning. Moreover, several species are characterized by different life history tactics whereby resident and anadromous forms may occur in genetically differentiated populations within a same species, as well as polymorphism within a population. The molecular mechanisms underlying the physiological differences between anadromous and resident forms during the first transition from freshwater to saltwater environments are only partially understood. Insofar research has typically focused on species of the genus Salmo. Here, using a 16,000 cDNA array, we tested the hypothesis that anadromous brook charr Salvelinus fontinalis are characterized by differences in their transcriptome relative to resident brook charr before the anadromous fish migration. Families originating from parapatric populations of anadromous and resident charr were reared in controlled environments mimicking natural temperature and photoperiod, and sampled in spring, while still in fresh water. While anadromous and resident charr showed similar transcriptome profiles in white muscle, they were characterized by striking differences in their gill transcriptome profiles. Genes that were upregulated in the gills of anadromous charr were principally involved in metabolism (mitochondrial electron transport chain, glucose metabolism, and protein synthesis, development (tissue differentiation and innate immunity. We discuss the nature of these transcriptomic differences in relation to molecular mechanisms underlying the expression of anadromous and resident life history tactics and suggest that the anadromous charr express some of the molecular processes present in other migratory salmonids [Current Zoology 58 (1: 158–170, 2012].

  17. Comparative transcriptomics of anadromous and resident brook charr Salvelinus fontinalis before their first salt water transition

    Institute of Scientific and Technical Information of China (English)

    Marylène BOULET; (E)ric NORMANDEAU; Bérénice BOUGAS; Cé1ine AUDET; Louis BERNATCHEZ

    2012-01-01

    Most salmonid taxa have an anadromous life history strategy,whereby fish migrate to saltwater habitats for a growth period before returning to freshwater habitats for spawning.Moreover,several species are characterized by different life history tactics whereby resident and anadromous forms may occur in genetically differentiated populations within a same species,as well as polymorphism within a population.The molecular mechanisms underlying the physiological differences between anadromous and resident forms during the first transition from freshwater to saltwater environments are only partially understood.Insofar research has typically focused on species of the genus Salmo.Here,using a 16,000 cDNA array,we tested the hypothesis that anadromous brook charr Salvelinus fontinalis are characterized by differences in their transcriptome relative to resident brook charr before the anadromous fish migration.Families originating from parapatric populations of anadromous and resident charr were reared in controlled environments mimicking natural temperature and photoperiod,and sampled in spring,while still in fresh water.While anadromous and resident charr showed similar transcriptome profdes in white muscle,they were characterized by striking differences in their gill transcriptome profiles.Genes that were upregulated in the gills of anadromous charr were principally involved in metabolism (mitochondrial electron transport chain,glucose metabolism,and protein synthesis),development (tissue differentiation) and innate immunity.We discuss the nature of these transcriptomic differences in relation to molecular mechanisms underlying the expression of anadromous and resident life history tactics and suggest that the anadromous chart express some of the molecular processes present in other migratory salmonids [Current Zoology 58 (1):158-170,2012].

  18. A second generation genetic map for rainbow trout (Oncorhynchus mykiss

    Directory of Open Access Journals (Sweden)

    Gahr Scott A

    2008-11-01

    Full Text Available Abstract Background Genetic maps characterizing the inheritance patterns of traits and markers have been developed for a wide range of species and used to study questions in biomedicine, agriculture, ecology and evolutionary biology. The status of rainbow trout genetic maps has progressed significantly over the last decade due to interest in this species in aquaculture and sport fisheries, and as a model research organism for studies related to carcinogenesis, toxicology, comparative immunology, disease ecology, physiology and nutrition. We constructed a second generation genetic map for rainbow trout using microsatellite markers to facilitate the identification of quantitative trait loci for traits affecting aquaculture production efficiency and the extraction of comparative information from the genome sequences of model fish species. Results A genetic map ordering 1124 microsatellite loci spanning a sex-averaged distance of 2927.10 cM (Kosambi and having 2.6 cM resolution was constructed by genotyping 10 parents and 150 offspring from the National Center for Cool and Cold Water Aquaculture (NCCCWA reference family mapping panel. Microsatellite markers, representing pairs of loci resulting from an evolutionarily recent whole genome duplication event, identified 180 duplicated regions within the rainbow trout genome. Microsatellites associated with genes through expressed sequence tags or bacterial artificial chromosomes produced comparative assignments with tetraodon, zebrafish, fugu, and medaka resulting in assignments of homology for 199 loci. Conclusion The second generation NCCCWA genetic map provides an increased microsatellite marker density and quantifies differences in recombination rate between the sexes in outbred populations. It has the potential to integrate with cytogenetic and other physical maps, identifying paralogous regions of the rainbow trout genome arising from the evolutionarily recent genome duplication event, and

  19. Impacts of climatic variation on trout: A global synthesis and path forward

    Science.gov (United States)

    Kovach, Ryan; Muhlfeld, Clint C.; Al-Chokhachy, Robert K.; Dunham, Jason; Letcher, Benjamin; Kershner, Jeffrey L.

    2016-01-01

    Despite increasing concern that climate change may negatively impact trout—a globally distributed group of fish with major economic, ecological, and cultural value—a synthetic assessment of empirical data quantifying relationships between climatic variation and trout ecology does not exist. We conducted a systematic review to describe how temporal variation in temperature and streamflow influences trout ecology in freshwater ecosystems. Few studies (n = 42) have quantified relationships between temperature or streamflow and trout demography, growth, or phenology, and nearly all estimates (96 %) were for Salvelinus fontinalis and Salmo trutta. Only seven studies used temporal data to quantify climate-driven changes in trout ecology. Results from these studies were beset with limitations that prohibited quantitatively rigorous meta-analysis, a concerning inadequacy given major investment in trout conservation and management worldwide. Nevertheless, consistent patterns emerged from our synthesis, particularly a positive effect of summer streamflow on trout demography and growth; 64 % of estimates were positive and significant across studies, age classes, species, and locations, highlighting that climate-induced changes in hydrology may have numerous consequences for trout. To a lesser degree, summer and fall temperatures were negatively related to population demography (51 and 53 % of estimates, respectively), but temperature was rarely related to growth. To address limitations and uncertainties, we recommend: (1) systematically improving data collection, description, and sharing; (2) appropriately integrating climate impacts with other intrinsic and extrinsic drivers over the entire lifecycle; (3) describing indirect consequences of climate change; and (4) acknowledging and describing intrinsic resiliency.

  20. Characterisation of a low pathogenic form of Gyrodactylus salaris from rainbow trout.

    Science.gov (United States)

    Jørgensen, Thomas R; Larsen, Thomas B; Jørgensen, Louise G; Bresciani, José; Kania, Per W; Buchmann, Kurt

    2007-01-18

    Gyrodactylus salaris was isolated from rainbow trout in a Danish freshwater trout farm, and a laboratory population of this particular parasite form was established on rainbow trout. Challenge infections were performed using different salmonid strains and species, including East Atlantic salmon Salmo salar (from the Danish River Skjernå), Baltic salmon S. salar (from the Swedish River Ume Alv) and rainbow trout Oncorhynchus mykiss (from the Danish rainbow trout farm Fousing). These were compared to infection studies on the Norwegian Laerdalselva parasite form kept under exactly the same conditions in the laboratory. The Danish G. salaris form had low virulence towards both Atlantic and Baltic salmon, whereas rainbow trout proved susceptible to the parasite. The Danish G. salaris form was able to maintain a very low infection on East Atlantic salmon, but not on the Baltic salmon, which eliminated the infection within 2 wk. Rainbow trout developed infection intensities ranging up to several hundred parasites per host. The host colonization patterns of the parasite differed clearly from those of previous studies on microhabitats of the Norwegian form of G. salaris. A comparative study on morphological characters (opisthaptoral hard parts) from the Danish parasite form and Norwegian G. salaris showed no significant differences. Selected genes comprising internal transcribed spacers 1 and 2 (ITS), ribosomal RNA intergenic spacer (IGS) and cytochrome c oxidase subunit I (COI) regions were cloned and sequenced. Five sequenced ITS clones from 5 individuals of the Danish strain consistently revealed a single base substitution compared to ITS sequences from all other known species and strains of Gyrodactylus. Mitochondrial COI gene sequences demonstrated that the Danish G. salaris form is closely similar to the Laerdalselva parasite form found in Norway. The IGS sequences were highly variable, but very similar to those obtained from German isolates of G. salaris.

  1. Interpopulation differences in expression of candidate genes for salinity tolerance in winter migrating anadromous brown trout ( Salmo trutta L.)

    DEFF Research Database (Denmark)

    Larsen, Peter Foged; Eg Nielsen, Einar; Koed, Anders

    2008-01-01

    Background: Winter migration of immature brown trout (Salmo trutta) into freshwater rivers has been hypothesized to result from physiologically stressful combinations of high salinity and low temperature in the sea. Results: We sampled brown trout from two Danish populations entering different...... was found in trout from the river entering high saline conditions, while a temperature independent up-regulation of both genes in full-strength seawater was found for trout entering marine conditions with lower salinities. Conclusion: Overall our results support the hypothesis that physiologically stressful...... saline conditions and quantified expression of the hsp70 and Na/K-ATPases alpha 1b genes following acclimation to freshwater and full-strength seawater at 2 degrees C and 10 degrees C. An interaction effect of low temperature and high salinity on expression of both hsp70 and Na/K-ATPase alpha 1b...

  2. 基于细胞色素b基因序列分析我国鲑亚科鱼类系统发育关系和不同虹鳟养殖群体遗传变异%Phylogenetic Relationships among Members in Salmoninae and Genetic Variation amongDifferent Populationsof Rainbow Trout Farmedin China Basedon Cytb Sequence

    Institute of Scientific and Technical Information of China (English)

    王伟伟

    2015-01-01

    采用PCR技术扩增了中国不同虹鳟群体的细胞色素b基因,对虹鳟不同养殖群体进行了遗传多样性分析,并与鲑亚科中其他5属11个物种的细胞色素b基因进行同源性比较,建立了主要养殖鲑亚科鱼类的系统关系。试验结果显示,虹鳟种内本地虹鳟群体遗传距离最小(0.001),道氏群体最高(0.004)。种间遗传距离以哲罗鲑与马苏大麻哈鱼的遗传距离最大(0.127),其次为哲罗鲑与银大麻哈鱼(0.123),以远东红点鲑和美洲红点鲑的最近(0.003)。聚类分析表明,同属的鱼均能单独聚类,哲罗鱼属和细鳞鱼属聚在一起,鲑属与红点鲑属聚在一起。虹鳟不同群体间并没有单独聚类,提示不同虹鳟群体间没有发生明显的遗传分化。%The Cytb sequences were amplified by PCR technique ,and genetic diversity was analyzed in different populations of rainbow trout Oncorhynchus mykiss farmed in China . The phylogenetic relationships among members in Salmoninae were established by comparing with the sequences from eleven other species representing five genera in subfamily Salmoninae .The results showed that the local rainbow trout population (0 .001 ) had the minimal intraspecies genetic distance ,and Donaldsons population the maximal (0 .004) .In the interspecies ,however ,there was the maximal genetic distance (0 .127) between taimen Hucho taimen and masou salmon O . masou ,followed by between taimen and coho salmon O . kisutch(0 .123)and the minimal genetic distances between Siberian char Salvelinus leucomaenis and brook trout S .fontinalis (0 .003) .Clustering analysis revealed that fish in the same genus was separately clustered ,lenok Brachymystax and H ucho being clustered together ,and Oncorhynchus and Salvelinus being clustered together .No clustering was observed in the individuals of different rainbow trout populations ,indicating that different populations of rainbow

  3. NASA's Hydrogen Outpost: The Rocket Systems Area at Plum Brook Station

    Science.gov (United States)

    Arrighi, Robert S.

    2016-01-01

    Oklahoma oil field tradition." Besides the Rocket Systems Area, Plum Brook Station also included a nuclear test reactor, a large vacuum tank, a hypersonic wind tunnel, and a full-scale upper-stage rocket stand. The Rocket Systems Area operated from 1961 until NASA shut down all of Plum Brook in 1974. The center reopened Plum Brook in the late 1980s and continues to use several test facilities. The Rocket Systems Area, however, was not restored. Today Plum Brook resembles a nature preserve more than an oil refinery. Lush fields and forests separate the large test facilities. Until recently, the abandoned Rocket Systems Area structures and equipment were visible amongst the greenery. These space-age ruins, particularly the three towers, stood as silent sentinels over the sparsely populated reservation. Few knew the story of these mysterious facilities when NASA removed them in the late 2000s.

  4. Assessing the impacts of river regulation on native bull trout (Salvelinus confluentus) and westslope cutthroat trout (Oncorhynchus clarkii lewisi) habitats in the upper Flathead River, Montana, USA

    Science.gov (United States)

    Muhlfeld, Clint C.; Jones, Leslie A.; Kotter, D.; Miller, William J.; Geise, Doran; Tohtz, Joel; Marotz, Brian

    2012-01-01

    Hungry Horse Dam on the South Fork Flathead River, Montana, USA, has modified the natural flow regimen for power generation, flood risk management and flow augmentation for anadromous fish recovery in the Columbia River. Concern over the detrimental effects of dam operations on native resident fishes prompted research to quantify the impacts of alternative flow management strategies on threatened bull trout (Salvelinus confluentus) and westslope cutthroat trout (Oncorhynchus clarkii lewisi) habitats. Seasonal and life‐stage specific habitat suitability criteria were combined with a two‐dimensional hydrodynamic habitat model to assess discharge effects on usable habitats. Telemetry data used to construct seasonal habitat suitability curves revealed that subadult (fish that emigrated from natal streams to the river system) bull trout move to shallow, low‐velocity shoreline areas at night, which are most sensitive to flow fluctuations. Habitat time series analyses comparing the natural flow regimen (predam, 1929–1952) with five postdam flow management strategies (1953–2008) show that the natural flow conditions optimize the critical bull trout habitats and that the current strategy best resembles the natural flow conditions of all postdam periods. Late summer flow augmentation for anadromous fish recovery, however, produces higher discharges than predam conditions, which reduces the availability of usable habitat during this critical growing season. Our results suggest that past flow management policies that created sporadic streamflow fluctuations were likely detrimental to resident salmonids and that natural flow management strategies will likely improve the chances of protecting key ecosystem processes and help to maintain and restore threatened bull trout and westslope cutthroat trout populations in the upper Columbia River Basin.

  5. Temporal Genetic Variance and Propagule-Driven Genetic Structure Characterize Naturalized Rainbow Trout (Oncorhynchus mykiss) from a Patagonian Lake Impacted by Trout Farming

    Science.gov (United States)

    Seeb, Lisa W.; Seeb, James E.; Arismendi, Ivan; Hernández, Cristián E.; Gajardo, Gonzalo; Galleguillos, Ricardo; Cádiz, Maria I.; Musleh, Selim S.

    2015-01-01

    Knowledge about the genetic underpinnings of invasions—a theme addressed by invasion genetics as a discipline—is still scarce amid well documented ecological impacts of non-native species on ecosystems of Patagonia in South America. One of the most invasive species in Patagonia’s freshwater systems and elsewhere is rainbow trout (Oncorhynchus mykiss). This species was introduced to Chile during the early twentieth century for stocking and promoting recreational fishing; during the late twentieth century was reintroduced for farming purposes and is now naturalized. We used population- and individual-based inference from single nucleotide polymorphisms (SNPs) to illuminate three objectives related to the establishment and naturalization of Rainbow Trout in Lake Llanquihue. This lake has been intensively used for trout farming during the last three decades. Our results emanate from samples collected from five inlet streams over two seasons, winter and spring. First, we found that significant intra- population (temporal) genetic variance was greater than inter-population (spatial) genetic variance, downplaying the importance of spatial divergence during the process of naturalization. Allele frequency differences between cohorts, consistent with variation in fish length between spring and winter collections, might explain temporal genetic differences. Second, individual-based Bayesian clustering suggested that genetic structure within Lake Llanquihue was largely driven by putative farm propagules found at one single stream during spring, but not in winter. This suggests that farm broodstock might migrate upstream to breed during spring at that particular stream. It is unclear whether interbreeding has occurred between “pure” naturalized and farm trout in this and other streams. Third, estimates of the annual number of breeders (Nb) were below 73 in half of the collections, suggestive of genetically small and recently founded populations that might experience

  6. Climate change and vulnerability of bull trout (Salvelinus confluentus ) in a fire-prone landscape

    Science.gov (United States)

    Jeffrey A. Falke; Rebecca L. Flitcroft; Jason B. Dunham; Kristina M. McNyset; Paul F. Hessburg; Gordon H. Reeves; C. Tara Marshall

    2015-01-01

    Linked atmospheric and wildfire changes will complicate future management of native coldwater fishes in fire-prone landscapes, and new approaches to management that incorporate uncertainty are needed to address this challenge. We used a Bayesian network (BN) approach to evaluate population vulnerability of bull trout (Salvelinus confluentus) in the Wenatchee River...

  7. Pre-migratory differentiation of wild brown trout into migrant and resident individuals

    DEFF Research Database (Denmark)

    Nielsen, C.; Aarestrup, Kim; Norum, U.;

    2003-01-01

    a smolt-like appearance before the onset of migration and had higher rate of change of gill Na+,K+-ATPase activity than fish remaining residents. The rate of change of gill Na+,K+-ATPase activity was independent of the distance migrated to the trap (3-28 km). Thus in bimodal wild brown trout populations...

  8. Overwintering of sea trout (Salmo trutta) in freshwater

    DEFF Research Database (Denmark)

    Thomsen, Dennis; Koed, Anders; Nielsen, Christian;

    2007-01-01

    for reproduction. However, immature fish may leave the ocean during their first or second winter at sea and overwinter in freshwater. The question is why does this occur? We tested the hypothesis that hypo-osmoregulatory capacity is compromised by low temperature in two coastal sea trout populations, one......Brown trout (Salmo trutta) show large phenotypic plasticity. Juveniles may reside in their native freshwater habitat until maturation or migrate into the ocean as 1- to 3-year-old smolts. Sea-going fish (sea trout) reside at sea for 2-3 years until migrating back to their native stream....... Low temperature compromised the hypo-osmoregulatory ability, as indicated by insufficient compensatory adjustments of ion-transport mechanisms. Tagging experiments revealed that descent of overwintering fish into the ocean occurred over a narrow time period coincident with increasing water temperature...

  9. Selection and preference of benthic habitat by small and large ammocoetes of the least brook lamprey (Lampetra aepyptera)

    Science.gov (United States)

    Smith, D.M.; Welsh, S.A.; Turk, P.J.

    2011-01-01

    In this laboratory study, we quantified substrate selection by small (large (100-150 mm) ammocoetes of the least brook lamprey (Lampetra aepyptera). In aquaria, ammocoetes were given a choice to burrow into six equally-available substrate types: small gravel (2.360-4.750 mm), coarse sand (0.500-1.400 mm), fine sand (0.125-0.500 mm), organic substrate (approximately 70% decomposing leaves/stems and organic sediment particles, and 30% silt and fine sand), an even mixture of silt, clay, and fine sand, and silt/clay (population sizes. ?? 2011 Springer Science+Business Media B.V.

  10. Episodic acidification of small streams in the northeastern united states: Effects on fish populations

    Science.gov (United States)

    Baker, J.P.; Van Sickle, J.; Gagen, C.J.; DeWalle, David R.; Sharpe, W.E.; Carline, R.F.; Baldigo, Barry P.; Murdoch, Peter S.; Bath, D.W.; Kretser, W.A.; Simonin, H.A.; Wigington, P.J.

    1996-01-01

    As part of the Episodic Response Project (ERP), we studied the effects of episodic acidification on fish in 13 small streams in the northeastern United States: four streams in the Adirondack region of New York, four streams in the Catskills, New York, and five streams in the northern Appalachian Plateau, Pennsylvania. In situ bioassays with brook trout (Salvelinus fontinalis) and a forage fish species (blacknose dace (Rhinichthys atratulus], mottled sculpin (Cottus bairdi), or slimy sculpin (Cottus cognatus), depending on the region) measured direct toxicity. Movements of individual brook trout, in relation to stream chemistry, were monitored using radiotelemetry. Electrofishing surveys assessed fish community status and the density and biomass of brook trout in each stream. During low flow, all streams except one had chemical conditions considered suitable for the survival and reproduction of most fish species (median pH 6.0-7.2 during low flow; inorganic Al 100-200 ??g/L. We conclude that episodic acidification can have long-term effects on fish communities in small streams.

  11. Who’s your mama? Riverine hybridisation of threatened freshwater Trout Cod and Murray Cod

    Science.gov (United States)

    Unmack, Peter J.; Dyer, Fiona J.; Lintermans, Mark

    2016-01-01

    Rates of hybridization and introgression are increasing dramatically worldwide because of translocations, restocking of organisms and habitat modifications; thus, determining whether hybridization is occuring after reintroducing extirpated congeneric species is commensurately important for conservation. Restocking programs are sometimes criticized because of the genetic consequences of hatchery-bred fish breeding with wild populations. These concerns are important to conservation restocking programs, including those from the Australian freshwater fish family, Percichthyidae. Two of the better known Australian Percichthyidae are the Murray Cod, Maccullochella peelii and Trout Cod, Maccullochella macquariensis which were formerly widespread over the Murray Darling Basin. In much of the Murrumbidgee River, Trout Cod and Murray Cod were sympatric until the late 1970s when Trout Cod were extirpated. Here we use genetic single nucleotide polymorphism (SNP) data together with mitochondrial sequences to examine hybridization and introgression between Murray Cod and Trout Cod in the upper Murrumbidgee River and consider implications for restocking programs. We have confirmed restocked riverine Trout Cod reproducing, but only as inter-specific matings, in the wild. We detected hybrid Trout Cod–Murray Cod in the Upper Murrumbidgee, recording the first hybrid larvae in the wild. Although hybrid larvae, juveniles and adults have been recorded in hatcheries and impoundments, and hybrid adults have been recorded in rivers previously, this is the first time fertile F1 have been recorded in a wild riverine population. The F1 backcrosses with Murray cod have also been found to be fertile. All backcrosses noted were with pure Murray Cod. Such introgression has not been recorded previously in these two species, and the imbalance in hybridization direction may have important implications for restocking programs.

  12. Who's your mama? Riverine hybridisation of threatened freshwater Trout Cod and Murray Cod.

    Science.gov (United States)

    Couch, Alan J; Unmack, Peter J; Dyer, Fiona J; Lintermans, Mark

    2016-01-01

    Rates of hybridization and introgression are increasing dramatically worldwide because of translocations, restocking of organisms and habitat modifications; thus, determining whether hybridization is occuring after reintroducing extirpated congeneric species is commensurately important for conservation. Restocking programs are sometimes criticized because of the genetic consequences of hatchery-bred fish breeding with wild populations. These concerns are important to conservation restocking programs, including those from the Australian freshwater fish family, Percichthyidae. Two of the better known Australian Percichthyidae are the Murray Cod, Maccullochella peelii and Trout Cod, Maccullochella macquariensis which were formerly widespread over the Murray Darling Basin. In much of the Murrumbidgee River, Trout Cod and Murray Cod were sympatric until the late 1970s when Trout Cod were extirpated. Here we use genetic single nucleotide polymorphism (SNP) data together with mitochondrial sequences to examine hybridization and introgression between Murray Cod and Trout Cod in the upper Murrumbidgee River and consider implications for restocking programs. We have confirmed restocked riverine Trout Cod reproducing, but only as inter-specific matings, in the wild. We detected hybrid Trout Cod-Murray Cod in the Upper Murrumbidgee, recording the first hybrid larvae in the wild. Although hybrid larvae, juveniles and adults have been recorded in hatcheries and impoundments, and hybrid adults have been recorded in rivers previously, this is the first time fertile F1 have been recorded in a wild riverine population. The F1 backcrosses with Murray cod have also been found to be fertile. All backcrosses noted were with pure Murray Cod. Such introgression has not been recorded previously in these two species, and the imbalance in hybridization direction may have important implications for restocking programs.

  13. Incorporating movement patterns to improve survival estimates for juvenile bull trout

    Science.gov (United States)

    Bowerman, Tracy; Budy, Phaedra

    2012-01-01

    Populations of many fish species are sensitive to changes in vital rates during early life stages, but our understanding of the factors affecting growth, survival, and movement patterns is often extremely limited for juvenile fish. These critical information gaps are particularly evident for bull trout Salvelinus confluentus, a threatened Pacific Northwest char. We combined several active and passive mark–recapture and resight techniques to assess migration rates and estimate survival for juvenile bull trout (70–170 mm total length). We evaluated the relative performance of multiple survival estimation techniques by comparing results from a common Cormack–Jolly–Seber (CJS) model, the less widely used Barker model, and a simple return rate (an index of survival). Juvenile bull trout of all sizes emigrated from their natal habitat throughout the year, and thereafter migrated up to 50 km downstream. With the CJS model, high emigration rates led to an extreme underestimate of apparent survival, a combined estimate of site fidelity and survival. In contrast, the Barker model, which allows survival and emigration to be modeled as separate parameters, produced estimates of survival that were much less biased than the return rate. Estimates of age-class-specific annual survival from the Barker model based on all available data were 0.218±0.028 (estimate±SE) for age-1 bull trout and 0.231±0.065 for age-2 bull trout. This research demonstrates the importance of incorporating movement patterns into survival analyses, and we provide one of the first field-based estimates of juvenile bull trout annual survival in relatively pristine rearing conditions. These estimates can provide a baseline for comparison with future studies in more impacted systems and will help managers develop reliable stage-structured population models to evaluate future recovery strategies.

  14. Assessment of Native Salmonids Above Hells Canyon Dam, Idaho, 2004-2005 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Meyer, Kevin A.; Lamansky, Jr., James A. (Idaho Department of Fish and Game, Boise, ID)

    2005-08-01

    years but recovered by 2003. Few other brook trout demographic parameters changed appreciably over the course of the project. Electrofishing removals required 210 person-days of effort. Despite experiencing slight changes in abundance, growth, and survival, brook trout in Pikes Fork appeared little affected by three years of intensive removal efforts, most likely because mortality within the population was high prior to initiation of the project such that the removal efforts merely replaced natural mortality with exploitation.

  15. Snorkeling as an alternative to depletion electrofishing for assessing cutthroat trout and brown trout in stream pools

    Science.gov (United States)

    Joyce, M.P.; Hubert, W.A.

    2003-01-01

    We compared abundance and length structure estimates of cutthroat trout (Oncorhynchus clarki) and brown trout (Salmo trutta) of 15 cm total length or greater obtained by snorkeling in stream pools with estimates obtained by depletion electrofishing. We sampled 12 pools in each of two streams formed by large springs in the Salt River Valley of western Wyoming. Snorkeling counts provided a relatively accurate index of depletion electrofishing estimates of abundance of cutthroat trout, but not brown trout. Linear regression analysis showed that snorkeling counts were significantly related to depletion electrofishing estimates for both cutthroat trout (P snorkeling and depletion electrofishing were close to being significantly different for cutthroat trout (P = 0.066) and substantially different for brown trout (P = 0.005). Snorkeling frequently failed to observe fish in the shortest length class (15-29 cm total length) of both cutthroat trout and brown trout.

  16. Influences of summer water temperatures on the movement, distribution, and resources use of fluvial Westslope Cutthroat Trout in the South Fork Clearwater River basin

    Science.gov (United States)

    Dobos, Marika E.; Corsi, Matthew P.; Schill, Daniel J.; DuPont, Joseph M.; Quist, Michael

    2016-01-01

    Although many Westslope Cutthroat Trout Oncorhynchus clarkii lewisi populations in Idaho are robust and stable, population densities in some systems remain below management objectives. In many of those systems, such as in the South Fork Clearwater River (SFCR) system, environmental conditions (e.g., summer temperatures) are hypothesized to limit populations of Westslope Cutthroat Trout. Radiotelemetry and snorkeling methods were used to describe seasonal movement patterns, distribution, and habitat use of Westslope Cutthroat Trout in the SFCR during the summers of 2013 and 2014. Sixty-six radio transmitters were surgically implanted into Westslope Cutthroat Trout (170–405 mm TL) from May 30–June 25, 2013, and June 20–July 6, 2014. Sedentary and mobile summer movement patterns by Westslope Cutthroat Trout were observed in the SFCR. Westslope Cutthroat Trout were generally absent from the lower SFCR. In the upper region of the SFCR, fish generally moved from the main-stem SFCR into tributaries as water temperatures increased during the summer. Fish remained in the middle region of the SFCR where water temperatures were cooler than in the upper or lower regions of the SFCR. A spatially explicit water temperature model indicated that the upper and lower regions of the SFCR exceeded thermal tolerance levels of Westslope Cutthroat Trout throughout the summer. During snorkeling, 23 Westslope Cutthroat Trout were observed in 13 sites along the SFCR and at low density (mean ± SD, 0.0003 ± 0.0001 fish/m2). The distribution of fish observed during snorkeling was consistent with the distribution of radio-tagged fish in the SFCR during the summer. Anthropogenic activities (i.e., grazing, mining, road construction, and timber harvest) in the SFCR basin likely altered the natural flow dynamics and temperature regime and thereby limited stream habitat in the SFCR system for Westslope Cutthroat Trout.

  17. Multiscale Genetic Structure of Yellowstone Cutthroat Trout in the Upper Snake River Basin.

    Energy Technology Data Exchange (ETDEWEB)

    Cegelski, Christine C.; Campbell, Matthew R.

    2006-05-30

    Populations of Yellowstone cutthroat trout Oncorhynchus clarkii bouvierii have declined throughout their native range as a result of habitat fragmentation, overharvest, and introductions of nonnative trout that have hybridized with or displaced native populations. The degree to which these factors have impacted the current genetic population structure of Yellowstone cutthroat trout populations is of primary interest for their conservation. In this study, we examined the genetic diversity and genetic population structure of Yellowstone cutthroat trout in Idaho and Nevada with data from six polymorphic microsatellite loci. A total of 1,392 samples were analyzed from 45 sample locations throughout 11 major river drainages. We found that levels of genetic diversity and genetic differentiation varied extensively. The Salt River drainage, which is representative of the least impacted migration corridors in Idaho, had the highest levels of genetic diversity and low levels of genetic differentiation. High levels of genetic differentiation were observed at similar or smaller geographic scales in the Portneuf River, Raft River, and Teton River drainages, which are more altered by anthropogenic disturbances. Results suggested that Yellowstone cutthroat trout are naturally structured at the major river drainage level but that habitat fragmentation has altered this structuring. Connectivity should be restored via habitat restoration whenever possible to minimize losses in genetic diversity and to preserve historical processes of gene flow, life history variation, and metapopulation dynamics. However, alternative strategies for management and conservation should also be considered in areas where there is a strong likelihood of nonnative invasions or extensive habitat fragmentation that cannot be easily ameliorated.

  18. Genetic diversity is related to climatic variation and vulnerability in threatened bull trout

    Science.gov (United States)

    Kovach, Ryan; Muhlfeld, Clint C.; Wade, Alisa A.; Hand, Brian K.; Whited, Diane C.; DeHaan, Patrick W.; Al-Chokhachy, Robert K.; Luikart, Gordon

    2015-01-01

    Understanding how climatic variation influences ecological and evolutionary processes is crucial for informed conservation decision-making. Nevertheless, few studies have measured how climatic variation influences genetic diversity within populations or how genetic diversity is distributed across space relative to future climatic stress. Here, we tested whether patterns of genetic diversity (allelic richness) were related to climatic variation and habitat features in 130 bull trout (Salvelinus confluentus) populations from 24 watersheds (i.e., ~4–7th order river subbasins) across the Columbia River Basin, USA. We then determined whether bull trout genetic diversity was related to climate vulnerability at the watershed scale, which we quantified on the basis of exposure to future climatic conditions (projected scenarios for the 2040s) and existing habitat complexity. We found a strong gradient in genetic diversity in bull trout populations across the Columbia River Basin, where populations located in the most upstream headwater areas had the greatest genetic diversity. After accounting for spatial patterns with linear mixed models, allelic richness in bull trout populations was positively related to habitat patch size and complexity, and negatively related to maximum summer temperature and the frequency of winter flooding. These relationships strongly suggest that climatic variation influences evolutionary processes in this threatened species and that genetic diversity will likely decrease due to future climate change. Vulnerability at a watershed scale was negatively correlated with average genetic diversity (r = −0.77;P bull trout and other imperiled species. Genetic diversity is already depressed where climatic vulnerability is highest; it will likely erode further in the very places where diversity may be most needed for future persistence.

  19. Brooks Range and eastern Alps: a tectonic comparison

    Energy Technology Data Exchange (ETDEWEB)

    Helwig, J.A.

    1985-04-01

    A comparison of the tectonic evolution of the Brooks Range (BR) and the Eastern Alps (EA) reveals a remarkable parallelism. Both of these Mesozoic-Cenozoic orogenic belts are underlain by sialic crust formed in an earlier Paleozoic orogenic cycle. The old basement is revealed in major tectonic windows: the Tauern Fenster (EA) and the Doonerak Window-Schwatka Mountains (BR) - which are unconformably overlapped by transgressive, neritic marine clastic to carbonate successions - the Permo-Triassic through Hochstegenkalk sequence (EA), and the Kekiktuk-Kayak-Lisburne sequence (BR). These successions are passive-margin sequences that pass southward, in palinspastically restored cross sections, to synchronous deep-water facies deposited on ophiolitic basement - Bunderschiefer on Triassic-Jurassic ophiolites (EA) and Kuna facies or Etivluk sequence on upper Paleozoic ophiolites (BR). Onset of subduction-collision is marked by olistostromal facies - Cretaceous wildflysch (EA) and Jura-Cretaceous Okpikruak Formation (BR) - and the development of major flysch-molasse successions in the foreland basins of the collisional fold and thrust belts. Important major contrasts between these two mountain ranges reside in their colliding blocks and their post-orogenic histories. Alpine orogenesis was driven by continent-continent collision, closing out a young, narrow ocean, whereas Brooks Range deformation appears to have originated by arc-continent collision, closing out an older, broad (.)ocean. Younger Cenozoic deformation is extensional and strike-slip in the Eastern Alps, producing disjunctive basins, but Cenozoic deformation in the Brooks Range is diverse and includes compression in the east and extension in the far west.

  20. Toxicokinetics of PFOS in rainbow trout

    Data.gov (United States)

    U.S. Environmental Protection Agency — This ScienceHub entry was developed for the published paper: Consoer et al., 2016, Toxicokinetics of perfluorooctane sulfonate in rainow trout (Oncorhynchus mykiss),...

  1. Linking movement and reproductive history of brook trout to assess habitat connectivity in a heterogeneous stream network

    Science.gov (United States)

    Kanno, Yoichiro; Letcher, Benjamin H.; Coombs, Jason A.; Nislow, Keith H.; Whiteley, Andrew R.

    2013-01-01

    1. Defining functional connectivity between habitats in spatially heterogeneous landscapes is a particular challenge for small-bodied aquatic species. Traditional approaches (e.g. mark–recapture studies) preclude an assessment of animal movement over the life cycle (birth to reproduction), and movement of individuals may not represent the degree of gene movement for fecund species.

  2. The Why, What, and Impact of GPA at Oxford Brookes University

    Science.gov (United States)

    Andrews, Matthew

    2016-01-01

    This paper examines the introduction at Oxford Brookes University of a Grade Point Average (GPA) scheme alongside the traditional honours degree classification. It considers the reasons for the introduction of GPA, the way in which the scheme was implemented, and offers an insight into the impact of GPA at Brookes. Finally, the paper considers…

  3. Adaptive trade-offs in juvenile salmonid metabolism associated with habitat partitioning between coho salmon and steelhead trout in coastal streams.

    Science.gov (United States)

    Van Leeuwen, Travis E; Rosenfeld, Jordan S; Richards, Jeffrey G

    2011-09-01

    1. Adaptive trade-offs are fundamental to the evolution of diversity and the coexistence of similar taxa and occur when complimentary combinations of traits maximize efficiency of resource exploitation or survival at different points on environmental gradients. 2. Standard metabolic rate (SMR) is a key physiological trait that reflects adaptations to baseline metabolic performance, whereas active metabolism reflects adaptations to variable metabolic output associated with performance related to foraging, predator avoidance, aggressive interactions or migratory movements. Benefits of high SMR and active metabolism may change along a resource (productivity) gradient, indicating that a trade-off exists among active metabolism, resting metabolism and energy intake. 3. We measured and compared SMR, maximal metabolic rate (MMR), aerobic scope (AS), swim performance (UCrit) and growth of juvenile hatchery and wild steelhead and coho salmon held on high- and low-food rations in order to better understand the potential significance of variation in SMR to growth, differentiation between species, and patterns of habitat use along a productivity gradient. 4. We found that differences in SMR, MMR, AS, swim performance and growth rate between steelhead trout and coho salmon were reduced in hatchery-reared fish compared with wild fish. Wild steelhead had a higher MMR, AS, swim performance and growth rate than wild coho, but adaptations between species do not appear to involve differences in SMR or to trade-off increased growth rate against lower swim performance, as commonly observed for high-growth strains. Instead, we hypothesize that wild steelhead may be trading off higher growth rate for lower food consumption efficiency, similar to strategies adopted by anadromous vs. resident brook trout and Atlantic salmon vs. brook trout. This highlights potential differences in food consumption and digestion strategies as cryptic adaptations ecologically differentiating salmonid species

  4. RAD sequencing yields a high success rate for westslope cutthroat and rainbow trout species-diagnostic SNP assays

    Science.gov (United States)

    Stephen J. Amish,; Paul A. Hohenlohe,; Sally Painter,; Robb F. Leary,; Muhlfeld, Clint C.; Fred W. Allendorf,; Luikart, Gordon

    2012-01-01

    Hybridization with introduced rainbow trout threatens most native westslope cutthroat trout populations. Understanding the genetic effects of hybridization and introgression requires a large set of high-throughput, diagnostic genetic markers to inform conservation and management. Recently, we identified several thousand candidate single-nucleotide polymorphism (SNP) markers based on RAD sequencing of 11 westslope cutthroat trout and 13 rainbow trout individuals. Here, we used flanking sequence for 56 of these candidate SNP markers to design high-throughput genotyping assays. We validated the assays on a total of 92 individuals from 22 populations and seven hatchery strains. Forty-six assays (82%) amplified consistently and allowed easy identification of westslope cutthroat and rainbow trout alleles as well as heterozygote controls. The 46 SNPs will provide high power for early detection of population admixture and improved identification of hybrid and nonhybridized individuals. This technique shows promise as a very low-cost, reliable and relatively rapid method for developing and testing SNP markers for nonmodel organisms with limited genomic resources.

  5. Life history characteristics and vital rates of Yellowstone Cutthroat Trout in two headwater basins

    Science.gov (United States)

    Uthe, Patrick; Al-Chokhachy, Robert K.; Zale, Alexander V.; Shepard, Bradley B.; McMahon, Thomas E.; Stephens, Tracy

    2016-01-01

    The Yellowstone Cutthroat Trout Oncorhynchus clarkii bouvieri is native to the Rocky Mountains and has declined in abundance and distribution as a result of habitat degradation and introduced salmonid species. Many of its remaining strongholds are in headwater basins with minimal human disturbances. Understanding the life histories, vital rates, and behaviors of Yellowstone Cutthroat Trout within headwater stream networks remains limited yet is critical for effective management and conservation. We estimated annual relative growth in length and weight, annual survival rates, and movement patterns of Yellowstone Cutthroat Trout from three tributaries of Spread Creek, Wyoming, and two tributaries of Shields River, Montana, from 2011 through 2013 using PIT tag antennas within a mark–recapture framework. Mean annual growth rates varied among tributaries and size-classes, but were slow compared with populations of Yellowstone Cutthroat Trout from large, low-elevation streams. Survival rates were relatively high compared with those of other Cutthroat Trout subspecies, but we found an inverse relationship between survival and size, a pattern contrary to what has been reported for Cutthroat Trout in large streams. Mean annual survival rates ranged from 0.32 (SE = 0.04) to 0.68 (SE = 0.05) in the Spread Creek basin and from 0.30 (SE = 0.07) to 0.69 (SE = 0.10) in the Shields River basin. Downstream movements from tributaries were substantial, with as much as 26.5% of a tagging cohort leaving over the course of the study. Integrating our growth, survival, and movement results demonstrates the importance of considering strategies to enhance headwater stream habitats and highlights the importance of connectivity with larger stream networks.

  6. Bull Trout Spawning Surveys: Kootenai National Wildlife Refuge

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — Bull trout are listed as threatened under the Endangered Species Act and Myrtle Creek was designated as critical habitat for bull trout this year. Myrtle Creek flows...

  7. 2016 Lake Michigan Lake Trout Working Group Report

    Science.gov (United States)

    Madenjian, Charles P.; Breidert, Brian; Boyarski, David; Bronte, Charles R.; Dickinson, Ben; Donner, Kevin; Ebener, Mark P.; Gordon, Roger; Hanson, Dale; Holey, Mark; Janssen, John; Jonas, Jory; Kornis, Matthew; Olsen, Erik; Robillard, Steve; Treska, Ted; Weldon, Barry; Wright, Greg D.

    2017-01-01

    This report provides a review on the progression of lake trout rehabilitation towards meeting the Salmonine Fish Community Objectives (FCOs) for Lake Michigan (Eshenroder et. al. 1995) and the interim goal and evaluation objectives articulated in A Fisheries Management Implementation Strategy for the Rehabilitation of Lake Trout in Lake Michigan (Dexter et al. 2011); we also include data describing lake trout stocking and mortality to portray the present state of progress towards lake trout rehabilitation.

  8. Local adaptation in brown trout early life-history traits: implications for climate change adaptability

    DEFF Research Database (Denmark)

    Jensen, L.F.; Hansen, Michael Møller; Pertoldi, C.

    2008-01-01

    to adapt. Temperature-related adaptability in traits related to phenology and early life history are expected to be particularly important in salmonid fishes. We focused on the latter and investigated whether four populations of brown trout (Salmo trutta) are locally adapted in early life-history traits...... and heritable variation in phenotypic plasticity suggest that although increasing temperatures are likely to affect some populations negatively, they may have the potential to adapt to changing temperature regimes.  ...

  9. EFFECT OF CULTURE CONDITIONS ON REPRODUCTIVE TRAITS OF BROWN TROUT SALMO TRUTTA L.

    OpenAIRE

    RANDÁK T.; KOCOUR M.; ŽLÁBEK V.; POLICAR T.; JARKOVSKÝ J.

    2006-01-01

    Progeny from artificial propagation of wild brown trout (Salmo trutta L.) of the Blanice river, Czech Republic, were farmed to maturity and spawned at ages three, four and five during 2002-2004. Reproductive parameters and biological quality of eggs in this farmed population were compared to those of the original wild population. ANCOVA showed no differences between wild and farmed fish in weight of eggs per female, total fecundity, or relative fecundity in any year. Significantly higher egg ...

  10. Analysis of Microhabitat Use for Two Trout Species Using a Combination of Remote Sensing and Passive Integrated transponder Tags

    Science.gov (United States)

    Lokteff, R.; Wheaton, J. M.; Roper, B.; DeMeurichy, K.; Randall, J.

    2011-12-01

    The Logan River and its tributaries in northern Utah sustain a significant population of the imperiled Bonneville cutthroat trout (Oncorhynchus clarki Utah) as well as invasive brown trout (Salmo trutta). In general, the upper reaches of the system are populated by cutthroat trout and the lower reaches by brown trout. Spawn Creek is a unique tributary in that it supports both of these species throughout the year. The purpose of this study is to identify differences in fine-scale microhabitat that explain utilization patterns of each species of fish. Passive integrated transponder (PIT) tags have been placed in trout over the last 3 years throughout Spawn Creek. Repeat GPS observations of these fish in their habitat during both spawning and non-spawning periods have been acquired over the last 4 years. Non-spawning activity has been captured using mobile PIT tag antennae. GPS observations of cutthroat trout spawning locations have also been recorded. From these observations both spawning and non-spawning "hotspots" have emerged, which appear to be highly correlated with specific microhabitat characteristics. The entire 2.5 km study reach on lower Spawn Creek has been scanned using ground-based light detection and ranging (LiDAR) which covers all observed "hotspots." LiDAR data provides sub-centimeter resolution point clouds from which detailed geometric measurements and topographic analyses can be used to reveal specific aspects of trout habitat. Where bathymetric data is needed, total station bathymetric surveys have been completed at sub-meter resolution. The combination of these data types at known "hotspot" locations provides an opportunity to quantify aspects of the physical environment at a uniquely fine scale relevant to individual fish. New metrics, as well as old metrics resolved at finer scales, will be presented to explain species and life-stage specific habitat "hotspots" in mountain streams.

  11. Metabolism, swimming performance, and tissue biochemistry of high desert redband trout (Oncorhynchus mykiss ssp.): evidence for phenotypic differences in physiological function.

    Science.gov (United States)

    Gamperl, A Kurt; Rodnick, Kenneth J; Faust, Heather A; Venn, Emilee C; Bennett, Max T; Crawshaw, Larry I; Keeley, Ernest R; Powell, Madison S; Li, Hiram W

    2002-01-01

    50% higher lactate dehydrogenase activity in white muscle and presumably a greater potential for anaerobic metabolism. Both populations exhibited a preferred temperature of approximately 13 degrees C and identical mitochondrial haplotypes and p53 gene allele frequencies. However, Bridge Creek trout had a more robust body form, with a relatively larger head and a deeper body and caudal peduncle. In summary, despite the short distance ( approximately 10 km) and genotypic similarity between study streams, our results indicate that phenotypic reorganization of anatomical characteristics, swimming ability at environmentally pertinent temperatures and white axial muscle ATP-producing pathways occurs in redband trout.

  12. Factors controlling the abundance of rainbow trout in the Colorado River in Grand Canyon in a reach utilized by endangered humpback chub

    Science.gov (United States)

    Korman, Josh; Yard, Michael D.; Yackulic, Charles B.

    2015-01-01

    We estimated the abundance, survival, movement, and recruitment of non-native rainbow trout in the Colorado River in Grand Canyon to determine what controls their abundance near the Little Colorado River (LCR) confluence where endangered humpback chub rear. Over a 3-year period, we tagged more than 70,000 trout and recovered over 8,200 tagged fish. Trout density was highest (10,000-25,000 fish/km) in the reach closest to Glen Canyon Dam where the majority of trout recruitment occurs, and was 30-50-fold lower (200-800 fish/km) in reaches near the LCR confluence ~100 km downstream. The extent of rainbow trout movement was limited with less than 1% of recaptures making movements greater than 20 km. However, due to high trout densities in upstream source areas, this small dispersal rate was sufficient to explain the 3-fold increase in the relatively small population near the LCR. Reducing dispersal rates of trout from upstream sources is the most feasible solution to maintain low densities near the LCR to minimize negative effects of competition and predation on humpback chub.

  13. Morphological variation of siscowet lake trout in Lake Superior

    Science.gov (United States)

    Bronte, C.R.; Moore, S.A.

    2007-01-01

    Historically, Lake Superior has contained many morphologically distinct forms of the lake trout Salvelinus namaycush that have occupied specific depths and locations and spawned at specific times of the year. Today, as was probably the case historically, the siscowet morphotype is the most abundant. Recent interest in harvesting siscowets to extract oil containing omega-3 fatty acids will require additional knowledge of the biology and stock structure of these lightly exploited populations. The objective of this study was to determine whether shape differences exist among siscowet populations across Lake Superior and whether these shape differences can be used to infer stock structure. Morphometric analysis (truss protocol) was used to differentiate among siscowets sampled from 23 locations in Lake Superior. We analyzed 31 distance measurements among 14 anatomical landmarks taken from digital images of fish recorded in the field. Cluster analysis of size-corrected data separated fish into three geographic groups: The Isle Royale, eastern (Michigan), and western regions (Michigan). Finer scales of stock structure were also suggested. Discriminant function analysis demonstrated that head measurements contributed to most of the observed variation. Cross-validation classification rates indicated that 67–71% of individual fish were correctly classified to their region of capture. This is the first study to present shape differences associated with location within a lake trout morphotype in Lake Superior.

  14. Effects of increased discharge on spawning and age-0 recruitment of rainbow trout in the Colorado River at Lees Ferry, Arizona

    Science.gov (United States)

    Avery, Luke A.; Korman, Josh; Persons, William R.

    2015-01-01

    Negative interactions of Rainbow Trout Oncorhynchus mykiss with endangered Humpback Chub Gila cypha pose challenges to the operation of Glen Canyon Dam (GCD) to manage for both species in the Colorado River. Operations to enhance the Rainbow Trout tailwater fishery may lead to an increase in downstream movement of the trout to areas where they are likely to interact with Humpback Chub. We evaluated the effects of dam operations on age-0 Rainbow Trout in the tailwater fishery to inform managers about how GCD operations could benefit a tailwater fishery for Rainbow Trout; although this could affect a Humpback Chub population farther downstream. A near year-long increase in discharge at GCD in 2011 enabled us to evaluate whether high and stable flows led to increased spawning and production of age-0 Rainbow Trout compared with other years. Rainbow Trout spawning was monitored by fitting a model to observed redd counts to estimate the number of redds created over a spawning season. Data collected during electrofishing trips in July–September and November were used to acquire age-0 trout population and mortality rate estimates. We found that high and stable flows in 2011 resulted in 3,062 redds (1.7 times the mean of all survey years) and a population estimate of 686,000 age-0 Rainbow Trout (second highest on record). Despite high initial abundance, mortality remained low through the year (0.0043%/d) resulting in significant recruitment with a record high November population estimate of 214,000 age-0 Rainbow Trout. Recent monitoring indicates this recruitment event was followed by an increase in downstream migration, which may lead to increased interactions with downstream populations of Humpback Chub. Consequently, while our results indicate that manipulating flow at GCD can be used to manage Rainbow Trout spawning and recruitment, fisheries managers should use flow manipulation in moderation to minimize downstream migration in order to reduce negative

  15. Minimum Pool and Bull Trout Prey Base Investigations at Beulah Reservoir - Final Report for 2008

    Science.gov (United States)

    Rose, Brien P.; Mesa, Matthew G.

    2009-01-01

    Beulah Reservoir in southeastern Oregon provides irrigation water to nearby farms and supports an adfluvial population of threatened bull trout (Salvelinus confluentus). Summer drawdowns in the reservoir could affect forage fish production and overwintering bull trout. To assess the impacts of drawdown, we sampled fish, invertebrates, and water-quality variables seasonally during 2006-08. In 2006, the summer drawdown was about 68 percent of full pool, which was less than a typical drawdown of 85 percent. We detected few changes in pelagic invertebrate densities, and catch rates, abundance, and sizes of fish when comparing values from spring to values from fall. We did note that densities of benthic insects in areas that were dewatered annually were lower than those from areas that were not dewatered annually. In 2007, the drawdown was 100 percent (to run-of-river level) and resulted in decreases in abundance of invertebrates as much as 96 percent, decreases in catch rates of fish as much as 80 percent, decreases in abundance of redside shiners (Richardsonius balteatus) and northern pikeminnow (Ptychocheilus oregonensis) as much as 93 percent, and decreased numbers of small fish in catches. In the fall 2007, we estimated the total biomass of forage fish to be 76 kilograms, or about one-quarter of total biomass of forage fish in 2006. Bioenergetics modeling suggested that ample forage for about 1,000 bull trout would exist after a moderate drawdown, but that forage remaining after a complete dewatering would not be sufficient for a population one-fifth the size. Our results indicate that drawdowns in Beulah Reservoir affect the aquatic community and perhaps the health and well-being of bull trout. The severity of effects depends on the extent of drawdown, population size of bull trout, and perhaps other factors.

  16. Movement and mortality of stocked brown trout in a stream

    DEFF Research Database (Denmark)

    Aarestrup, Kim; Jepsen, Niels; Koed, Anders;

    2005-01-01

    The movement and mortality of stocked brown trout Salmo trutta were investigated using radio telemetry. Four brown trout left the study area whereas the remaining fish were stationary. After 5 weeks, 13 out of 50 tagged brown trout were still alive in the stream. Surviving fish had a significantly...

  17. Biology and management of threatened and endangered western trouts

    Science.gov (United States)

    R. J. Behnke; Mark Zarn

    1976-01-01

    Discusses taxonomy, reasons for decline, life history and ecology, and suggestions for preservation and management of six closely related trouts native to western North America: Colorado River cutthroat, Salmo clarki pleuriticus; greenback trout, S. c. stomias; Lahontan cutthroat, S. c. henshawi; Paiute trout,...

  18. Sensitivity of Trout to Chronic Acute Exposure to Selenium

    DEFF Research Database (Denmark)

    Nielsen, Gunnar Gissel; Nielsen, M. Gissel

    1978-01-01

    Trout were exposed to selenite (Na2SeO3) solutions of varying concentrations (0.1-100 ppm Se) for periods of up to 4 wk. A chronic exposure to 0.1 ppm Se or less is non-lethal to trout. Lethality at higher concentrations depends on the length of exposure. Trout that survive for 10 days in tap...

  19. Contrasting past and current numbers of bears visiting Yellowstone cutthroat trout streams

    Science.gov (United States)

    Haroldson, Mark A.; Schwartz, Charles C.; , JUSTIN E. TEISBERG; , Kerry A. Gunther; , JENNIFER K. FORTIN; , CHARLES T. ROBBINS

    2014-01-01

    Spawning cutthroat trout (Oncorhynchus clarkii bouvieri) were historically abundant within tributary streams of Yellowstone Lake within Yellowstone National Park and were a highly digestible source of energy and protein for Yellowstone’s grizzly bears (Ursus arctos) and black bears (U. americanus). The cutthroat trout population has subsequently declined since the introduction of non-native lake trout (Salvelinus namaycush), and in response to effects of drought and whirling disease (Myxobolus cerebralis). The trout population, duration of spawning runs, and indices of bear use of spawning streams had declined in some regions of the lake by 1997–2000. We initiated a 3-year study in 2007 to assess whether numbers of spawning fish, black bears, and grizzly bears within and alongside stream corridors had changed since 1997– 2000. We estimated numbers of grizzly bears and black bears by first compiling encounter histories of individual bears visiting 48 hair-snag sites along 35 historically fished streams.We analyzed DNA encounter histories with Pradel-recruitment and Jolly-Seber (POPAN) capture-mark-recapture models. When compared to 1997–2000, the current number of spawning cutthroat trout per stream and the number of streams with cutthroat trout has decreased. We estimated that 48 (95% CI¼42–56) male and 23 (95% CI¼21–27) female grizzly bears visited the historically fished tributary streams during our study. In any 1- year, 46 to 59 independent grizzly bears (8–10% of estimated Greater Yellowstone Ecosystem population) visited these streams. When compared with estimates from the 1997 to 2000 study and adjusted for equal effort, the number of grizzly bears using the stream corridors decreased by 63%. Additionally, the number of black bears decreased between 64% and 84%. We also document an increased proportion of bears of both species visiting front-country (i.e., near human development) streams. With the recovery of cutthroat trout, we suggest bears

  20. Effect of high pressure treatment on the quality of rainbow trout (Oncorhynchus mykiss) and mahi mahi (Coryphaena hippurus).

    Science.gov (United States)

    Yagiz, Y; Kristinsson, H G; Balaban, M O; Marshall, M R

    2007-11-01

    High pressure processing (HPP) is becoming a promising seafood preservation method. The objective was to investigate the effect of HPP on quality of rainbow trout and mahi mahi during cold storage. Skinless fillets treated with different pressures (150, 300, 450, and 600 MPa for 15 min) and stored at 4 degrees C were analyzed at 1, 3, and 6 d storage. Red muscle was analyzed for lipid oxidation products by measuring thiobarbituric reactive substances (TBARS) and whole muscle was analyzed for total aerobic count, texture profile analysis, and color. A pressure of 300 MPa effectively inactivated the initial microbial population in rainbow trout (6-log reduction). However, inactivation of the initial population on mahi mahi was only about 4-log reduction at the same pressure. Microbial growth was significantly retarded after HPP. Color results showed that redness (a* value) of rainbow trout at 300 MPa and above was significantly (P < 0.05) lower compared to mahi mahi. TBARS values for rainbow trout increased with increased pressure, whereas the same trend was not seen for mahi mahi where maximum oxidation was found at 300 MPa and then declined. This study demonstrates the usefulness of HPP in seafood processing and the influence of species variation on processing parameters. The optimum HPP conditions for influencing lipid oxidation, microbial load, and color changes were found to be 300 MPa for rainbow trout and 450 MPa for mahi mahi.

  1. Simulation analysis of within-day flow fluctuation effects on trout below flaming Gorge Dam.

    Energy Technology Data Exchange (ETDEWEB)

    Railsback, S. F.; Hayse, J. W.; LaGory, K. E.; Environmental Science Division; EPRI

    2006-01-01

    In addition to being renewable, hydropower has the advantage of allowing rapid load-following, in that the generation rate can easily be varied within a day to match the demand for power. However, the flow fluctuations that result from load-following can be controversial, in part because they may affect downstream fish populations. At Flaming Gorge Dam, located on the Green River in northeastern Utah, concern has been raised about whether flow fluctuations caused by the dam disrupt feeding at a tailwater trout fishery, as fish move in response to flow changes and as the flow changes alter the amount or timing of the invertebrate drift that trout feed on. Western Area Power Administration (Western), which controls power production on submonthly time scales, has made several operational changes to address concerns about flow fluctuation effects on fisheries. These changes include reducing the number of daily flow peaks from two to one and operating within a restricted range of flows. These changes significantly reduce the value of the power produced at Flaming Gorge Dam and put higher load-following pressure on other power plants. Consequently, Western has great interest in understanding what benefits these restrictions provide to the fishery and whether adjusting the restrictions could provide a better tradeoff between power and non-power concerns. Directly evaluating the effects of flow fluctuations on fish populations is unfortunately difficult. Effects are expected to be relatively small, so tightly controlled experiments with large sample sizes and long study durations would be needed to evaluate them. Such experiments would be extremely expensive and would be subject to the confounding effects of uncontrollable variations in factors such as runoff and weather. Computer simulation using individual-based models (IBMs) is an alternative study approach for ecological problems that are not amenable to analysis using field studies alone. An IBM simulates how a

  2. Relative susceptibility and effects on performance of Rio Grande cutthroat trout and rainbow trout challenged with Myxobolus cerebralis

    Science.gov (United States)

    DuBey, R.J.; Caldwell, C.A.; Gould, W.R.

    2007-01-01

    We evaluated the susceptibility of Rio Grande cutthroat trout (RGCT) Oncorhynchus clarkii virginalis to infection by Myxobolus cerebralis in a laboratory experiment. In the same experiment, rainbow trout (RBT) O. mykiss were similarly exposed to M. cerebralis as a reference of known sensitivity to the parasite. Treatments consisting of six parasite concentrations (0, 50, 100, 250, 500, and 1,000 triactinomyxons [TAMS] per fish) were randomized within a complete block design using RGCT and RBT fry beginning at 60 d posthatch (600 degree-days at 10??C). The laboratory experiment was terminated at 130 d postexposure (1,900 degree-days at 10??C). Diagnostic metrics included clinical signs (behavioral and black tail), survival, myxospore counts, histology, and a swimming performance challenge. Clinical signs of whirling disease were observed within both species at 500 and 1,000 TAMs/fish by 66 d postexposure to the disease. Rio Grande cutthroat trout exhibited significantly lower survival (50% cumulative mortality at 1,000 TAMs/fish) and a significant concentration response compared with RBT (8% cumulative mortality at 1,000 TAMs/fish). Histological scoring of cranial sections using a 0-5 scale of increasing pathogenic effect revealed greater disease severity in RGCT (3.20) than in RBT (2.43) at 100 TAMs/fish but no difference at 1,000 TAMs/fish (4.15 and 4.12, respectively). Swimming performance revealed detectably lower critical swimming speed in both RGCT and RBT in relation to increased parasite concentrations, the RGCT exhibiting detectably lower critical swimming speeds than the RBT at increased parasite concentration. If M. cerebralis were to spread to areas supporting RGCT, population-level effects may occur. ?? Copyright by the American Fisheries Society 2007.

  3. Critical swimming speeds of wild bull trout

    Science.gov (United States)

    Mesa, M.G.; Weiland, L.K.; Zydlewski, G.B.

    2004-01-01

    We estimated the critical swimming speeds (Ucrit) of wild bull trout at 6??, 11??, and 15??C in laboratory experiments. At 11??C, 5 fish ranging from 11 to 19 cm in length had a mean Ucrit of 48.24 cm/s or 3.22 body lengths per second (BL/s). Also at 11??C , 6 fish from 32 to 42 cm had a mean Ucrit of 73.99 cm/s or 2.05 BL/s. At 15??C, 5 fish from 14 to 23 cm had a mean Ucrit of 54.66 cm/s or 2.88 BL/s. No fish successfully swam at 6??C. Swim speed was significantly influenced by fish length. Many bull trout performed poorly in our enclosed respirometers: of 71 Ucrit tests we attempted, only the 16 described above were successful. Bull trout that refused to swim held station within tunnels by using their pectoral fins as depressors, or they rested and later became impinged against a downstream screen. Several common techniques did not stimulate consistent swimming activity in these fish. Our estimates of U crit for bull trout provide an understanding of their performance capacity and will be useful in modeling efforts aimed at improving fish passage structures. We recommend that fishway or culvert designers concerned with bull trout passage maintain velocities within their structures at or below our estimates of Ucrit, thus taking a conservative approach to ensuring that these fish can ascend migratory obstacles safely.

  4. Stony Brook's Graduate Courses in Clear, Vivid, Conversational Communication

    Science.gov (United States)

    Bass, E.

    2011-12-01

    Graduate students in the sciences at Stony Brook University are taking for-credit courses to learn to communicate more effectively about science with people outside their disciplines, including public officials, the press, students, potential funders and employers, colleagues in other fields, and the general public. Five Communicating Science courses are offered; two more will be added in January, 2012. The courses are offered by the School of Journalism and developed by the Center for Communicating Science (CCS). This interdisciplinary center was founded in 2009, with the participation of Alan Alda, the actor, writer, director and longtime advocate for science, who is a Visiting Professor at Stony Brook. At the core of the program are three 1-credit (14-hour) modules that rely on experiential learning, repeated practice and immediate, interactive feedback. In Distilling Your Message, students practice speaking clearly, vividly and conversationally about their work at different levels of complexity and formality to different audiences, using storytelling techniques where appropriate. In Writing for the Public, they extend these skills into writing. In Improvisation for Scientists, the most unconventional of the courses, students play improvisational theater games to help themselves connect more directly, personally and responsively with their audiences. In their first two semesters, the courses are expected to serve about 90 students, taking a total of about 180 credits. Most of the courses have filled quickly, mixing master's and doctoral students from more than a dozen fields, including marine and atmospheric sciences. Three to six credits of Communicating Science courses are required for students in two programs, an MA in Marine Conservation and Policy and an Advanced Certificate in Health Communications. The content and methods of the courses are based largely on lessons learned from evaluations of all-day workshops that CCS has conducted for more than 250

  5. Occurrence, size, and tag retention of sneaker male hatchery rainbow trout

    Science.gov (United States)

    Isely, J.J.; Grabowski, T.B.

    2004-01-01

    One alternative reproductive tactic involving early-maturing, cryptic males is referred to as "sneaking." Although sneakers tend to be easily detectable upon close inspection, little is known about the proportion of a fish population consisting of sneakers. We examined 15,400 age-1 rainbow trout Oncorhynchus mykiss in a hatchery. Total length (mm), wet weight (g), and sex (sneaker male or unknown) were recorded for each fish. We also individually tagged each sneaker male with soft visual implant alphanumeric (VIalpha) tags that were sequentially numbered and held the fish for 25 d before inspection. Sneakers constituted 2.8% of the hatchery rainbow trout population and were smaller in total length and weight than typical rainbow trout of the same age. Retention of the VIalpha tags in sneakers was 58.9%, significantly lower than has been reported under similar circumstances. We found that sneaker males may contribute substantially to hatchery populations. Reduced tag retention in sneakers may bias studies evaluating the effect of hatchery fish on wild populations. We believe that hatchery-produced sneaker males have the potential to contribute importantly to the genetic composition of wild populations.

  6. Electrofishing mark-recapture and depletion methodologies evoke behavioral and physiological changes in cutthroat trout

    Science.gov (United States)

    Mesa, M. G.; Schreck, C.B.

    1989-01-01

    We examined the behavioral and physiological responses of wild and hatchery-reared cutthroat trout Oncorhynchus clarki subjected to a single electroshock, electroshock plus marking, and multiple electroshocks in natural and artificial streams. In a natural stream, cutthroat trout released after capture by electrofishing and marking showed distinct behavioral changes: fish immediately sought cover, remained relatively inactive, did not feed, and were easily approached by a diver. An average of 3–4 h was required for 50% of the fish to return to a seemingly normal mode of behavior, although responses varied widely among collection sites. Using the depletion method, we observed little change in normal behavior offish remaining in the stream section (i.e., uncaptured fish) after successive passes with electrofishing gear. In an artificial stream, hatchery-reared and wild cutthroat trout immediately decreased their rates of feeding and aggression after they were electroshocked and marked. Hatchery fish generally recovered in 2–3 h; wild fish required at least 24 h to recover. Analysis of feeding and aggression data by hierarchical rank revealed no distinct recovery trends among hatchery fish of different ranks; among wild cutthroat trout, however, socially dominant fish seemed to recover faster than intermediate and subordinate fish. Physiological indicators of stress (plasma cortisol and blood lactic acid) increased significantly in cutthroat trout subjected to electroshock plus marking or single or multiple electroshocks. As judged by the magnitude of the greatest change in cortisol and lactate, multiple electroshocks elicited the most severe stress response; however, plasma concentrations of both substances had returned to unstressed control levels by 6 h after treatment. It was evident that electrofishing and the procedures involved with estimating fish population size elicited a general stress response that was manifested not only physiologically but also

  7. Schubert in Stony Brook and Kinks in Vienna

    Science.gov (United States)

    van Nieuwenhuizen, P.

    Wolfgang Kummer became my friend during the many years I have been visiting Vienna in January. He created a marvellous Institute for Theoretical Physics with an enthusiastic group of students, postdocs and colleagues. Great Institutes need a central person to grow around. Two such Institutes I have been attached to are Utrecht where M. Veltman created a school of field theorists, and Stony Brook where C.N. Yang was the natural leader. In Vienna Wolfgang played a similar role. His mere presence during seminars gave a sense of enthusiasm and direction, and his active participation was an example for younger physicists not to be shy and also ask further clarifications when needed. In particular I was impressed by his collaboration with students. Almost every afternoon I would find him sitting with one or two students at his desk or in the conference room, trying to understand new problems in dilaton gravity, and discussing and calculating with them on equal footing. I invited Wolfgang to visit Stony Brook, but he was noncommittal, and I soon found out that he was seriously ill. Yet, he would come in everyday, and be the life of the Institute. Every year with his wife Lore we would go out one evening in Vienna, either to a play or a concert. These were great evenings as I will describe below. Near the end, I would phone him at his home, and we would talk physics. He remained optimistic about his chances, but then suddenly all went wrong and he died. I miss a dear friend. Below is the story of how we became friends…

  8. Trends in Rainbow Trout recruitment, abundance, survival, and growth during a boom-and-bust cycle in a tailwater fishery

    Science.gov (United States)

    Korman, Josh; Yard, Micheal D.; Kennedy, Theodore A.

    2017-01-01

    Data from a large-scale mark-recapture study was used in an open population model to determine the cause for long-term trends in growth and abundance of a Rainbow Trout Oncorhynchus mykiss population in the tailwater of Glen Canyon Dam, AZ. Reduced growth affected multiple life stages and processes causing negative feedbacks that regulated the abundance of the population, including: higher mortality of larger fish; lower rates of recruitment (young of year) in years when growth was reduced; and lower rates of sexual maturation the following year. High and steady flows during spring and summer of 2011 resulted in very large recruitment event. The population declined 10-fold by 2016 due a combination of lower recruitment and reduced survival of larger trout. Survival rates for trout ≥ 225 mm in 2014, 2015, and 2016 were 11%, 21%, and 22% lower than average survival rates between 2012 and 2013, respectively. Abundance at the end of the study would have been three- to five-fold higher had survival rates for larger trout remained at the elevated levels estimated for 2012 and 2013. Growth declined between 2012 and 2014 owing to reduced prey availability, which led to very poor fish condition by fall of 2014 (~0.9-0.95). Poor condition in turn resulted in low survival rates of larger fish during fall of 2014 and winter of 2015, which contributed to the population collapse. In Glen Canyon, large recruitment events driven by high flows can lead to increases in the population that cannot be sustained due to limitations in prey supply. In the absence of being able to regulate prey supply, flows which reduce the probability of large recruitment events can be used to avoid boom-and-bust population cycles. Our study demonstrates that mark-recapture is a very informative approach for understanding the dynamics of tailwater trout populations.

  9. Reconstructing the demographic history of divergence between European river and brook lampreys using approximate Bayesian computations

    Directory of Open Access Journals (Sweden)

    Quentin Rougemont

    2016-04-01

    Full Text Available Inferring the history of isolation and gene flow during species divergence is a central question in evolutionary biology. The European river lamprey (Lampetra fluviatilis and brook lamprey (L. planeri show a low reproductive isolation but have highly distinct life histories, the former being parasitic-anadromous and the latter non-parasitic and freshwater resident. Here we used microsatellite data from six replicated population pairs to reconstruct their history of divergence using an approximate Bayesian computation framework combined with a random forest model. In most population pairs, scenarios of divergence with recent isolation were outcompeted by scenarios proposing ongoing gene flow, namely the Secondary Contact (SC and Isolation with Migration (IM models. The estimation of demographic parameters under the SC model indicated a time of secondary contact close to the time of speciation, explaining why SC and IM models could not be discriminated. In case of an ancient secondary contact, the historical signal of divergence is lost and neutral markers converge to the same equilibrium as under the less parameterized model allowing ongoing gene flow. Our results imply that models of secondary contacts should be systematically compared to models of divergence with gene flow; given the difficulty to discriminate among these models, we suggest that genome-wide data are needed to adequately reconstruct divergence history.

  10. Identification of Larval Pacific Lampreys (Lampetra tridentata), River Lampreys (L. ayresi), and Western Brook Lampreys (L. richardsoni) and Thermal Requirements of Early Life History Stages of Lampreys, Annual Report 2002-2003.

    Energy Technology Data Exchange (ETDEWEB)

    Meeuwig, Michael

    2004-01-01

    Two fundamental aspects of lamprey biology were examined to provide tools for population assessment and determination of critical habitat needs of Columbia River Basin (CRB) lampreys (the Pacific lamprey, Lampetra tridentata, and the western brook lamprey, L. richardsoni). We evaluated the usefulness of current diagnostic characteristics for identification of larval lampreys (i.e., pigment patterns) and collected material for development of meristic and morphometric descriptions of early life stage CRB lampreys, and we determined the effects of temperature on survival and development of early life stage CRB lampreys. Thirty-one larval lampreys were collected from locations throughout the CRB and transported to the Columbia River Research Laboratory. Lampreys were sampled at six-week intervals at which time they were identified to the species level based on current diagnostic characteristics. Sampling was repeated until lampreys metamorphosed, at which time species identification was validated based on dentition, or until they died, at which time they were preserved for genetic examination. These lampreys were sampled 30 times with two individuals metamorphosing, both of which were consistently identified, and subsequently validated, as Pacific lampreys. Of the remaining lampreys, only one was inconsistently identified (Pacific lamprey in 83% of the sampling events and western brook lamprey in 17% of the sampling events). These data suggest that pigmentation patterns do not change appreciably through time. In 2001 and 2002 we artificially spawned Pacific and western brook lampreys in the laboratory to provide material for meristic and morphometric descriptions. We collected, digitized, preserved, and measured the mean chorion diameter of Pacific and western brook lamprey embryos. Embryos ranged in development from 1 d post fertilization to just prior to hatch, and were incubated at 14 C. Mean chorion diameter was greater and more variable for Pacific lampreys (mean

  11. Identification of larval Pacific lampreys (Lampetra tridentata), river lampreys (L. ayresi), and western brook lampreys (L. richardsoni) and thermal requirements of early life history stages of lampreys. Annual report 2002-2003

    Science.gov (United States)

    Meeuwig, M.H.; Bayer, J.M.; Seelye, J.G.; Reiche, R.A.

    2003-01-01

    Two fundamental aspects of lamprey biology were examined to provide tools for population assessment and determination of critical habitat needs of Columbia River Basin (CRB) lampreys (the Pacific lamprey, Lampetra tridentata, and the western brook lamprey, L. richardsoni). We evaluated the usefulness of current diagnostic characteristics for identification of larval lampreys (i.e., pigment patterns) and collected material for development of meristic and morphometric descriptions of early life stage CRB lampreys, and we determined the effects of temperature on survival and development of early life stage CRB lampreys. Thirty-one larval lampreys were collected from locations throughout the CRB and transported to the Columbia River Research Laboratory. Lampreys were sampled at six-week intervals at which time they were identified to the species level based on current diagnostic characteristics. Sampling was repeated until lampreys metamorphosed, at which time species identification was validated based on dentition, or until they died, at which time they were preserved for genetic examination. These lampreys were sampled 30 times with two individuals metamorphosing, both of which were consistently identified, and subsequently validated, as Pacific lampreys. Of the remaining lampreys, only one was inconsistently identified (Pacific lamprey in 83% of the sampling events and western brook lamprey in 17% of the sampling events). These data suggest that pigmentation patterns do not change appreciably through time. In 2001 and 2002 we artificially spawned Pacific and western brook lampreys in the laboratory to provide material for meristic and morphometric descriptions. We collected, digitized, preserved, and measured the mean chorion diameter of Pacific and western brook lamprey embryos. Embryos ranged in development from 1 d post fertilization to just prior to hatch, and were incubated at 14 C. Mean chorion diameter was greater and more variable for Pacific lampreys (mean

  12. Immunity to VHS virus in rainbow trout

    DEFF Research Database (Denmark)

    Lorenzen, Niels; Olesen, Niels Jørgen; Koch, C.

    1999-01-01

    Viral hemorrhagic septicemia virus (VHSV) is the rhabdovirus that causes most disease problems in farmed rainbow trout in Europe. Survivors of infection are usually immune to reinfection but as with other fish viruses, development of a modern recombinant vaccine has been complicated by the limited...... knowledge of the immune mechanisms and antigens involved in induction of immunity. Neutralizing and protective monoclonal antibodies recognize the envelope glycoprotein (G protein) which is the only viral protein known to be present on the surface of the virus particle. Immunoblotting analyses...... with monoclonal antibodies as well as with sera from immunized trout have indicated that protein conformation plays an important role in neutralization epitopes. The virus neutralizing activity often found in sera from convalescent trout is highly dependent on a poorly defined complementing activity in normal...

  13. Status and opportunities for genomics research with rainbow trout

    Science.gov (United States)

    Thorgaard, G.H.; Bailey, G.S.; Williams, D.; Buhler, D.R.; Kaattari, S.L.; Ristow, S.S.; Hansen, J.D.; Winton, J.R.; Bartholomew, J.L.; Nagler, J.J.; Walsh, P.J.; Vijayan, M.M.; Devlin, R.H.; Hardy, R.W.; Overturf, K.E.; Young, W.P.; Robison, B.D.; Rexroad, C.; Palti, Y.

    2002-01-01

    The rainbow trout (Oncorhynchus mykiss) is one of the most widely studied of model fish species. Extensive basic biological information has been collected for this species, which because of their large size relative to other model fish species are particularly suitable for studies requiring ample quantities of specific cells and tissue types. Rainbow trout have been widely utilized for research in carcinogenesis, toxicology, comparative immunology, disease ecology, physiology and nutrition. They are distinctive in having evolved from a relatively recent tetraploid event, resulting in a high incidence of duplicated genes. Natural populations are available and have been well characterized for chromosomal, protein, molecular and quantitative genetic variation. Their ease of culture, and experimental and aquacultural significance has led to the development of clonal lines and the widespread application of transgenic technology to this species. Numerous microsatellites have been isolated and two relatively detailed genetic maps have been developed. Extensive sequencing of expressed sequence tags has begun and four BAC libraries have been developed. The development and analysis of additional genomic sequence data will provide distinctive opportunities to address problems in areas such as evolution of the immune system and duplicate genes. ?? 2002 Elsevier Science Inc. All rights reserved.

  14. Water temperature and baseflow discharge of streams throughout the range of Rio Grande cutthroat trout in Colorado and New Mexico—2010 and 2011

    Science.gov (United States)

    Zeigler, Matthew P.; Todd, Andrew S.; Caldwell, Colleen A.

    2013-01-01

    This study characterized the thermal regime in a number of Colorado and New Mexico streams that contain populations of Rio Grande cutthroat trout (Oncorhynchus clarkii virginalis) and had no previous record of continual temperature records. When compared to Colorado’s water temperature criteria (Cold Tier 1), a portion of these populations appeared to be at risk from elevated stream temperatures, as indicated by exceedance of both acute (17–22 percent) and chronic (2–9 percent) water quality metrics. Summer water temperature profiles recorded at sites within current Rio Grande cutthroat trout habitat indicated that although the majority of currently occupied conservation streams have temperatures that fall well below these biologically based acute and chronic thermal thresholds, several sites may be at or approaching water temperatures considered stressful to cutthroat trout. Further, water temperatures should be considered in decisions regarding the current and future thermal suitability of potential Rio Grande cutthroat trout restoration sites. Additionally, baseflow discharge sampling indicated that a majority of the sampled stream segments containing Rio Grande cutthroat trout have flows less than 1.0 cubic feet per second (cfs) in both 2010 (74 percent) and 2011 (77 percent). The relative drought sensitivity of these low baseflow streams containing Rio Grande cutthroat trout could be further evaluated to assess their probable sustainability under possible future drought conditions.

  15. Flume length and post-exercise impingement affect anaerobic metabolism in brook charr Salvelinus fontinalis.

    Science.gov (United States)

    Tudorache, C; O'Keefe, R A; Benfey, T J

    2010-02-01

    The effect of flume length and impingement time on post-exercise lactate concentrations in brook charr Salvelinus fontinalis were examined. Swimming in longer flumes increased lactate concentrations, as does impingement after swimming in short flumes.

  16. 75 FR 38716 - Safety Zone; Vietnam Veterans of America Fireworks Display, Brookings, OR

    Science.gov (United States)

    2010-07-06

    ...-9319, e-mail D13-SG-SecPortlandWWM@uscg.mil . If you have questions on viewing the docket, call Renee V... America are holding a fireworks display near Brookings, Oregon on July 4, 2010. Due to the...

  17. Environmental contaminants in fish from Mere Brook - U.S. Naval Air Station, Brunswick, Maine

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — Mere Brook bisects three former landfills at the U.S. Naval Air Station in Brunswick, Maine (NASB). Leachate, soil, and sediment analyzed during Superfund remedial...

  18. Olemuse teater. Kantor ja Brook / Jan Kott ; tõlk. Eva-Liisa Linder

    Index Scriptorium Estoniae

    Kott, Jan

    2004-01-01

    T. Kantori lavastustest "Surnud klass" ja "Wielopole Wielopole" ning P. Brooki "Carmeni" lavastusest. Tõlgitud raamatust : Jan Kott. The Theatre of Essence: Kantor and Brook.- The Theatre of Essence and other Essays. Evanston, Northwestern University Press, 1984, lk. 159-165

  19. Olemuse teater. Kantor ja Brook / Jan Kott ; tõlk. Eva-Liisa Linder

    Index Scriptorium Estoniae

    Kott, Jan

    2004-01-01

    T. Kantori lavastustest "Surnud klass" ja "Wielopole Wielopole" ning P. Brooki "Carmeni" lavastusest. Tõlgitud raamatust : Jan Kott. The Theatre of Essence: Kantor and Brook.- The Theatre of Essence and other Essays. Evanston, Northwestern University Press, 1984, lk. 159-165

  20. The Foote Brook Natural Channel Design Restoration Project (2001) and Post Monitoring Project (2002)--Johnson, Vermont

    Data.gov (United States)

    Vermont Center for Geographic Information — The Foote Brook, located in Johnson, Vermont, is known to biologists and anglers as a high quality stream with significant natural reproduction of rainbow, brown,...

  1. Post Monitoring (2003) of the Foote Brook Natural Channel Design Restoration Project--Johnson, Vermont

    Data.gov (United States)

    Vermont Center for Geographic Information — The Foote Brook, located in Johnson, Vermont, is known to biologists and anglers as a high quality stream with significant natural reproduction of rainbow, brown,...

  2. CRED 5 m Gridded bathymetry of Brooks Banks, Hawaii, USA (Arc ASCII format)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Gridded bathymetry (5m) of the shelf and slope environments of Brooks Banks, Hawaii, USA. The ASCII includes multibeam bathymetry from the Simrad EM300, Simrad...

  3. Plasticity of boldness in rainbow trout, Oncorhynchus mykiss: do hunger and predation influence risk-taking behaviour?

    Science.gov (United States)

    Thomson, Jack S; Watts, Phillip C; Pottinger, Tom G; Sneddon, Lynne U

    2012-05-01

    Boldness, a measure of an individual's propensity for taking risks, is an important determinant of fitness but is not necessarily a fixed trait. Dependent upon an individual's state, and given certain contexts or challenges, individuals may be able to alter their inclination to be bold or shy in response. Furthermore, the degree to which individuals can modulate their behaviour has been linked with physiological responses to stress. Here we attempted to determine whether bold and shy rainbow trout, Oncorhynchus mykiss, can exhibit behavioural plasticity in response to changes in state (nutritional availability) and context (predation threat). Individual trout were initially assessed for boldness using a standard novel object paradigm; subsequently, each day for one week fish experienced either predictable, unpredictable, or no simulated predator threat in combination with a high (2% body weight) or low (0.15%) food ration, before being reassessed for boldness. Bold trout were generally more plastic, altering levels of neophobia and activity relevant to the challenge, whereas shy trout were more fixed and remained shy. Increased predation risk generally resulted in an increase in the expression of three candidate genes linked to boldness, appetite regulation and physiological stress responses - ependymin, corticotrophin releasing factor and GABA(A) - but did not produce a significant increase in plasma cortisol. The results suggest a divergence in the ability of bold and shy trout to alter their behavioural profiles in response to internal and exogenous factors, and have important implications for our understanding of the maintenance of different behavioural phenotypes in natural populations.

  4. Modeling Exposure to Electromagnetic Fields with Realistic Anatomical Models: The Brooks Finite Difference Time Domain (FDTD)

    Science.gov (United States)

    2008-02-01

    Both versions of Brooks FDTD are parallelized for Beowulf clusters and have run on more than one hundred processors. In addition to code, a number of...rewritten in C. Both versions of Brooks FDTD are parallelized for Beowulf clusters and have run on more than one hundred processors. In addition to...have made significant contributions include: Aldon Lyssy, who volunteered to scavenge and build the first Beowulf : Peter Gajsek who lead the first

  5. Charles Lewis Brook: third Director of the BAA Variable Star Section

    CERN Document Server

    Shears, Jeremy

    2011-01-01

    Charles Lewis Brook, MA, FRAS, FRMetS (1855 - 1939) served as Director of the BAA Variable Star Section from 1910 to 1921. During this time he was not merely interested in collecting the observations of the members (to which he also contributed), but he also spent considerable amounts of time analysing the data and preparing numerous publications on the findings. This paper discusses Brook's life and work, with a particular focus on his contribution to variable star astronomy.

  6. Pre-migratory differentiation of wild brown trout Salmo trutta into migrant and resident individuals

    DEFF Research Database (Denmark)

    Nielsen, Christian; Aarestrup, Kim; Nørum, Ulrik;

    2003-01-01

    a smolt-like appearance before the onset of migration and had higher rate of change of gill Na+,K+-ATPase activity than fish remaining residents. The rate of change of gill Na+,K+-ATPase activity was independent of the distance migrated to the trap (3-28 km). Thus in bimodal wild brown trout populations...

  7. Evaluation of Bull Trout Movements in the Tucannon and Lower Snake Rivers, 2002-2006 Project Completion Summary.

    Energy Technology Data Exchange (ETDEWEB)

    Faler, Michael P. [U.S. Fish and Wildlife Service; Mendel, Glen; Fulton, Carl [Washington Department of Fish and Wildlife

    2008-11-20

    The Columbia River Distinct Population Segment of bull trout (Salvelinus confluentus) was listed as threatened under the Endangered Species Act in 1998. One of the identified major threats to the species is fragmentation resulting from dams on over-wintering habitats of migratory subpopulations. A migratory subgroup in the Tucannon River appeared to utilize the Snake River reservoirs for adult rearing on a seasonal basis. As a result, a radio telemetry study was conducted on this subgroup from 2002-2006, to help meet Reasonable and Prudent Measures, and Conservation Recommendations associated with the lower Snake River dams in the FCRPS Biological Opinion, and to increase understanding of bull trout movements within the Tucannon River drainage. We sampled 1,109 bull trout in the Tucannon River; 124 of these were surgically implanted with radio tags and PIT tagged, and 681 were only PIT tagged. The remaining 304 fish were either recaptures, or released unmarked. Bull trout seasonal movements within the Tucannon River were similar to those described for other migratory bull trout populations. Bull trout migrated upstream in spring and early summer to the spawning areas in upper portions of the Tucannon River watershed. They quickly moved off the spawning areas in the fall, and either held or continued a slower migration downstream through the winter until early the following spring. During late fall and winter, bull trout were distributed in the lower half of the Tucannon River basin, down to and including the mainstem Snake River below Little Goose Dam. We were unable to adequately radio track bull trout in the Snake River and evaluate their movements or interactions with the federal hydroelectric dams for the following reasons: (1) none of our radio-tagged fish were detected attempting to pass a Snake River dam, (2) our radio tags had poor transmission capability at depths greater than 12.2 m, and (3) the sample size of fish that actually entered the Snake River

  8. Effects on water chemistry, benthic invertebrates and brown trout following forest fertilization in central Sweden

    Energy Technology Data Exchange (ETDEWEB)

    Goethe, L.; Soederberg, H.; Sjoelander, E. (County Administrative Board of Vaesternorrland, Haernoesand (Sweden). Environmental Unit); Nohrstedt, H.Oe. (Inst. for Forest Improvement, Uppsala (Sweden))

    1993-01-01

    Two coniferous forest drainage areas in central Sweden were partially fertilized with ammonium nitrate and calcium ammonium nitrate respectively, both at a dose of 150 kg N per ha. During the following years observations were made on stream water chemistry, invertebrates and brown trout (Salmo trutta L.). Upstream stations were used as controls. Very high concentrations of inorganic N (up to 45 mg l[sup -1]) were recorded immediately after the fertilization. Thereafter, concentration decreased rapidly but remained elevated during the whole study period. Acidity conditions (pH, alkalinity, aluminium) were unaffected by both treatments. The only registered effect on the benthic fauna was a three- to five-fold increase of drifting invertebrates during the first four-five days after the treatment. However, this did not reduce the population density at the treated stations. No effects on population of trout were recorded. (22 refs., 6 figs., 3 tabs.).

  9. Experimental infection with epizootic haematopoietic necrosis virus (EHNV of rainbow trout (Oncorhynchus mykiss Walbaum and European perch (Perca fluviatilis L.

    Directory of Open Access Journals (Sweden)

    Borzym Ewa

    2015-12-01

    Full Text Available The aim of this study was the determination of the susceptibility of Polish farmed redfin perch (Perca fluviatilis L. and rainbow trout (Oncorhynchus mykiss Walbaum to experimental infection with haematopoietic necrosis virus (EHNV. A bath challenge model was tested at two temperature ranges: 13-15°C and 20-22°C. After 7 d, the first clinical signs and mortality were observed in fish kept at these temperatures. Significantly more mortality cases were reported in the redfin perch population, reaching a maximum of 24% compared with 12% in the rainbow trout group at 20-22°C. EHNV was reisolated from redfin perch and rainbow trout tissue in cell culture and the infection was confirmed by a molecular method and histopathology during the duration of the experiment. This study revealed that fish from Polish farms can be susceptible to EHNV even at lower temperatures.

  10. Bull trout (Salvelinus confluentus) telemetry and associated habitat data collected in a geodatabase from the upper Boise River, southwestern Idaho

    Science.gov (United States)

    MacCoy, Dorene E.; Shephard, Zachary M.; Benjamin, Joseph R.; Vidergar, Dmitri T.; Prisciandaro, Anthony F.

    2017-03-23

    Bull trout (Salvelinus confluentus), listed as threatened under the Endangered Species Act, are among the more thermally sensitive of coldwater species in North America. The Boise River upstream of Arrowrock Dam in southwestern Idaho (including Arrowrock Reservoir) provides habitat for one of the southernmost populations of bull trout. The presence of the species in Arrowrock Reservoir poses implications for dam and reservoir operations. From 2011 to 2014, the Bureau of Reclamation and the U.S. Geological Survey collected fish telemetry data to improve understanding of bull trout distribution and movement in Arrowrock Reservoir and in the upper Boise River tributaries. The U.S. Geological Survey compiled the telemetry (fish location) data, along with reservoir elevation, river discharge, precipitation, and water-quality data in a geodatabase. The geodatabase includes metadata compliant with Federal Geographic Data Committee content standards. The Bureau of Reclamation plans to incorporate the data in a decision‑support tool for reservoir management.

  11. The production of fluorescent transgenic trout to study in vitro myogenic cell differentiation

    Directory of Open Access Journals (Sweden)

    Rescan Pierre-Yves

    2010-05-01

    Full Text Available Abstract Background Fish skeletal muscle growth involves the activation of a resident myogenic stem cell population, referred to as satellite cells, that can fuse with pre-existing muscle fibers or among themselves to generate a new fiber. In order to monitor the regulation of myogenic cell differentiation and fusion by various extrinsic factors, we generated transgenic trout (Oncorhynchus mykiss carrying a construct containing the green fluorescent protein reporter gene driven by a fast myosin light chain 2 (MlC2f promoter, and cultivated genetically modified myogenic cells derived from these fish. Results In transgenic trout, green fluorescence appeared in fast muscle fibers as early as the somitogenesis stage and persisted throughout life. Using an in vitro myogenesis system we observed that satellite cells isolated from the myotomal muscle of transgenic trout expressed GFP about 5 days post-plating as they started to fuse. GFP fluorescence persisted subsequently in myosatellite cell-derived myotubes. Using this in vitro myogenesis system, we showed that the rate of muscle cell differentiation was strongly dependent on temperature, one of the most important environmental factors in the muscle growth of poikilotherms. Conclusions We produced MLC2f-gfp transgenic trout that exhibited fluorescence in their fast muscle fibers. The culture of muscle cells extracted from these trout enabled the real-time monitoring of myogenic differentiation. This in vitro myogenesis system could have numerous applications in fish physiology to evaluate the myogenic activity of circulating growth factors, to test interfering RNA and to assess the myogenic potential of fish mesenchymal stem cells. In ecotoxicology, this system could be useful to assess the impact of environmental factors and marine pollutants on fish muscle growth.

  12. Summer habitat use by Columbia River redband trout in the Kootenai River drainage, Montana

    Science.gov (United States)

    Muhlfeld, Clint C.; Bennett, David H.

    2001-01-01

    The reported decline in the abundance, distribution, and genetic diversity of Columbia River redband trout Oncorhynchus mykiss gairdneri (a rainbow trout subspecies) has prompted fisheries managers to investigate their habitat requirements, identify critical habitat, and develop effective conservation and recovery programs. We analyzed the microhabitat, mesohabitat, and macrohabitat use and distribution of Columbia River redband trout by means of snorkel surveys in two watersheds in the Kootenai River drainage, Montana and Idaho, during the summers of 1997 and 1998. Juvenile (36–125 mm total length, TL) and adult (>=126 mm TL) fish preferred deep microhabitats (>=0.4 m) with low to moderate velocities (<=0.5 m/s) adjacent to the thalweg. Conversely, age-0 (<=35 mm) fish selected slow water (<=0.1 m/s) and shallow depths (<=0.2 m) located in lateral areas of the channel. Age-0, juvenile, and adult fish strongly selected pool mesohabitats and avoided riffles; juveniles and adults generally used runs in proportion to their availability. At the macrohabitat scale, density of Columbia River redband trout (35 mm) was positively related to the abundance of pools and negatively related to stream gradient. The pool: riffle ratio, gradient, and stream size combined accounted for 80% of the variation in density among 23 stream reaches in five streams. Our results demonstrate that low-gradient, medium-elevation reaches with an abundance of complex pools are critical areas for the production of Columbia River redband trout. These data will be useful in assessing the impacts of land-use practices on the remaining populations and may assist with habitat restoration or enhancement efforts.

  13. Gene expression and pathologic alterations in juvenile rainbow trout due to chronic dietary TCDD exposure.

    Science.gov (United States)

    Liu, Qing; Rise, Matthew L; Spitsbergen, Jan M; Hori, Tiago S; Mieritz, Mark; Geis, Steven; McGraw, Joseph E; Goetz, Giles; Larson, Jeremy; Hutz, Reinhold J; Carvan, Michael J

    2013-09-15

    validations are consistent and showed significant induction in the 100 ppb group at 28 days (p<0.05). Overall, lesion in nasal epithelium is a novel and significant result in this study, and TCDD-responsive rainbow trout transcripts identified in the present study may lead to the development of new molecular biomarkers for assessing the potential impacts of environmental TCDD on rainbow trout populations. Copyright © 2013 Elsevier B.V. All rights reserved.

  14. Single nucleotide polymorphism discovery in rainbow trout by deep sequencing of a reduced representation library

    Directory of Open Access Journals (Sweden)

    Salem Mohamed

    2009-11-01

    Full Text Available Abstract Background To enhance capabilities for genomic analyses in rainbow trout, such as genomic selection, a large suite of polymorphic markers that are amenable to high-throughput genotyping protocols must be identified. Expressed Sequence Tags (ESTs have been used for single nucleotide polymorphism (SNP discovery in salmonids. In those strategies, the salmonid semi-tetraploid genomes often led to assemblies of paralogous sequences and therefore resulted in a high rate of false positive SNP identification. Sequencing genomic DNA using primers identified from ESTs proved to be an effective but time consuming methodology of SNP identification in rainbow trout, therefore not suitable for high throughput SNP discovery. In this study, we employed a high-throughput strategy that used pyrosequencing technology to generate data from a reduced representation library constructed with genomic DNA pooled from 96 unrelated rainbow trout that represent the National Center for Cool and Cold Water Aquaculture (NCCCWA broodstock population. Results The reduced representation library consisted of 440 bp fragments resulting from complete digestion with the restriction enzyme HaeIII; sequencing produced 2,000,000 reads providing an average 6 fold coverage of the estimated 150,000 unique genomic restriction fragments (300,000 fragment ends. Three independent data analyses identified 22,022 to 47,128 putative SNPs on 13,140 to 24,627 independent contigs. A set of 384 putative SNPs, randomly selected from the sets produced by the three analyses were genotyped on individual fish to determine the validation rate of putative SNPs among analyses, distinguish apparent SNPs that actually represent paralogous loci in the tetraploid genome, examine Mendelian segregation, and place the validated SNPs on the rainbow trout linkage map. Approximately 48% (183 of the putative SNPs were validated; 167 markers were successfully incorporated into the rainbow trout linkage map. In

  15. Learning to Communicate Science: Stony Brook University's Approach

    Science.gov (United States)

    Bass, E.

    2012-12-01

    Stony Brook University offers an unusual series of short courses to help science graduate students learn to communicate more effectively about science with people outside their disciplines, including the public, public officials, potential funders and employers, students, the press, and colleagues in other fields. The courses include six 1-credit (14-hour) modules in oral and written communication that rely on practice and interactive feedback. More than 120 master's and PhD students, from more than 16 departments, have taken at least one of the courses since spring 2011. Most students who try one module end up taking two or three. An additional course for medical and nursing students was added in fall 2012. The courses are offered in the School of Journalism and were developed by the Center for Communicating Science (CCS). CCS was founded in 2009, with the participation of Alan Alda, the actor, writer, and longtime advocate for science, who is a Visiting Professor at Stony Brook. The Communicating Science courses have received strong institutional support and enthusiastic reviews. They are required by two programs, an MA in Marine Conservation and Policy and an Advanced Certificate in Health Communications. Two successive Provosts have subsidized course costs for PhD students, and Graduate School leaders are working to establish a steady funding stream to allow expansion of the program. Our aspiration at CCS is for every science graduate student to receive some training in communicating about science to the public. Several factors have helped in establishing the program: --CCS' multidisciplinary nature helped build support, with participation by faculty from across the campus, including not only the natural sciences, engineering, and medicine, but journalism, theatre arts, and the Writing Program, as well as nearby Brookhaven National Laboratory and Cold Spring Harbor Laboratory. --Before offering courses, CCS conducted all-day workshops and high

  16. Lake trout in northern Lake Huron spawn on submerged drumlins

    Science.gov (United States)

    Riley, Stephen C.; Binder, Thomas; Wattrus, Nigel J.; Faust, Matthew D.; Janssen, John; Menzies, John; Marsden, J. Ellen; Ebener, Mark P.; Bronte, Charles R.; He, Ji X.; Tucker, Taaja R.; Hansen, Michael J.; Thompson, Henry T.; Muir, Andrew M.; Krueger, Charles C.

    2014-01-01

    Recent observations of spawning lake trout Salvelinus namaycush near Drummond Island in northern Lake Huron indicate that lake trout use drumlins, landforms created in subglacial environments by the action of ice sheets, as a primary spawning habitat. From these observations, we generated a hypothesis that may in part explain locations chosen by lake trout for spawning. Most salmonines spawn in streams where they rely on streamflows to sort and clean sediments to create good spawning habitat. Flows sufficient to sort larger sediment sizes are generally lacking in lakes, but some glacial bedforms contain large pockets of sorted sediments that can provide the interstitial spaces necessary for lake trout egg incubation, particularly if these bedforms are situated such that lake currents can penetrate these sediments. We hypothesize that sediment inclusions from glacial scavenging and sediment sorting that occurred during the creation of bedforms such as drumlins, end moraines, and eskers create suitable conditions for lake trout egg incubation, particularly where these bedforms interact with lake currents to remove fine sediments. Further, these bedforms may provide high-quality lake trout spawning habitat at many locations in the Great Lakes and may be especially important along the southern edge of the range of the species. A better understanding of the role of glacially-derived bedforms in the creation of lake trout spawning habitat may help develop powerful predictors of lake trout spawning locations, provide insight into the evolution of unique spawning behaviors by lake trout, and aid in lake trout restoration in the Great Lakes.

  17. Enterococcus rivorum sp. nov., from water of pristine brooks.

    Science.gov (United States)

    Niemi, R Maarit; Ollinkangas, Tuula; Paulin, Lars; Svec, Pavel; Vandamme, Peter; Karkman, Antti; Kosina, Marcel; Lindström, Kristina

    2012-09-01

    A significant number of Enterococcus strains from pristine waters of two brooks in Finland formed a distinct cluster on the basis of whole-cell protein fingerprinting by one-dimensional SDS-PAGE. The strains shared the following characteristics. Cells were ovoid, Gram-positive-staining and non-spore-forming, appearing singly or in pairs or chains. They were facultatively anaerobic and catalase-negative. Growth in broth containing 6.5 % NaCl or at 45 °C was weak or absent. Production of D antigen was variable. The strains tolerated 60 °C for 30 min, 40 % bile and tellurite, hydrolysed aesculin strongly and gelatin weakly, produced no acid from hippurate and did not reduce it, grew weakly at 10 °C, showed a strong reaction for the Voges-Proskauer test and produced acid from methyl α-d-glucoside, mannitol, sorbitol and sucrose, with weak or no production of acid from methyl α-d-mannoside, l-arabinose, gluconate and l-xylose. Several of the strains were selected for identification on the basis of sequencing of almost the whole 16S rRNA gene and partial atpA and pheS genes and of (GTG)(5)-PCR fingerprints. Partial atpA and pheS gene sequencing was also performed for those type strains of Enterococcus species without available sequences in the database. The pristine brook isolates formed a novel species, for which the name Enterococcus rivorum sp. nov. (type strain S299(T) = HAMBI 3055(T) = LMG 25899(T) = CCM 7986(T)) is proposed. On the basis of 16S rRNA gene sequence similarity, E. rivorum sp. nov. is related to the Enterococcus faecalis genogoup. It is distinguished from described Enterococcus species on the basis of 16S rRNA, atpA and pheS gene sequences and whole-cell protein and (GTG)(5)-PCR fingerprints. It is most closely related to E. faecalis, but DNA-DNA hybridization confirms it to represent a novel species.

  18. Simulating the effect of climate change on stream temperature in the Trout Lake Watershed, Wisconsin

    Energy Technology Data Exchange (ETDEWEB)

    Selbig, William R., E-mail: wrselbig@usgs.gov

    2015-07-15

    The potential for increases in stream temperature across many spatial and temporal scales as a result of climate change can pose a difficult challenge for environmental managers, especially when addressing thermal requirements for sensitive aquatic species. This study evaluates simulated changes to the thermal regime of three northern Wisconsin streams in response to a projected changing climate using a modeling framework and considers implications of thermal stresses to the fish community. The Stream Network Temperature Model (SNTEMP) was used in combination with a coupled groundwater and surface water flow model to assess forecasts in climate from six global circulation models and three emission scenarios. Model results suggest that annual average stream temperature will steadily increase approximately 1.1 to 3.2 °C (varying by stream) by the year 2100 with differences in magnitude between emission scenarios. Daily mean stream temperature during the months of July and August, a period when cold-water fish communities are most sensitive, showed excursions from optimal temperatures with increased frequency compared to current conditions. Projections of daily mean stream temperature, in some cases, were no longer in the range necessary to sustain a cold water fishery. - Highlights: • A stream temperature model was calibrated for three streams in northern Wisconsin. • The effect of climate change on stream temperature was simulated in each stream. • Annual average stream temperature was projected to rise from 1 to 3 °C by 2100. • Forecasts of stream temperature exceeded optimal ranges for brook trout.

  19. Superfund Record of Decision (EPA Region 5): Fields Brook sediment operable unit, Ashtabula, Ohio, September 1986. Final report

    Energy Technology Data Exchange (ETDEWEB)

    1986-09-30

    Fields Brook is located in the City of Ashtabula, Ohio and drains a 5.6-square mile watershed (defined as the 'site'). The 3.5 mile main channel of Fields Brook flows through an industrial area that is one of the largest and most diversified concentrations of chemical plants in Ohio. Industrial sources have contaminated the sediment in Fields Brook with a variety of organic and heavy metal pollutants, including TCE, PCE, chlorobenzene, vinyl chloride, arsenic, zinc, mercury and chromium. Base-neutral compounds including hexachloroethane, toluenediamine and toluene diisocyanate also were detected in Fields Brook sediments. Sediments taken from the Ashtabula River in the vicinity of Fields Brook are contaminated with PCBs. The U.S. EPA believes that the amount of contamination entering the brook at this time has been substantially reduced due to the recent development of pollution control laws and discharge-permitting requirements.

  20. Infectious pancreatic necrosis the trout farmers' dilemma

    Science.gov (United States)

    Parisot, T.J.

    1965-01-01

    Induction of the innate immune pathways is critical for early anti-viral defense but there is limited understanding of how teleost fish recognize viral molecules and activate these pathways. In mammals, Toll-like receptors (TLR) 7 and 8 bind single-stranded RNA of viral origin and are activated by synthetic anti-viral imidazoquinoline compounds. Herein, we identify and describe the rainbow trout (Oncorhynchus mykiss) TLR7 and TLR8 gene orthologs and their mRNA expression. Two TLR7/8 loci were identified from a rainbow trout bacterial artificial chromosome (BAC) library using DNA fingerprinting and genetic linkage analyses. Direct sequencing of two representative BACs revealed intact omTLR7and omTLR8a1 open reading frames (ORFs) located on chromosome 3 and a second locus on chromosome 22 that contains an omTLR8a2 ORF and a putative TLR7pseudogene. We used the omTLR8a1/2 nomenclature for the two trout TLR8 genes as phylogenetic analysis revealed that they and all the other teleost TLR8 genes sequenced to date are similar to the zebrafish TLR8a, but are distinct from the zebrafish TLR8b. The duplicated trout loci exhibit conserved synteny with other fish genomes extending beyond the tandem of TLR7/8 genes. The trout TLR7 and 8a1/2 genes are composed of a single large exon similar to all other described TLR7/8 genes. The omTLR7 ORF is predicted to encode a 1049 amino acid (aa) protein with 84% similarity to the Fugu TLR7and a conserved pattern of predicted leucine-rich repeats (LRR). The omTLR8a1 andomTLR8a2 are predicted to encode 1035- and 1034-aa proteins, respectively, and have 86% similarity to each other. omTLR8a1 is likely the ortholog of the only Atlantic salmonTLR8 gene described to date as they have 95% aa sequence similarity. The tissue expression profiles of omTLR7, omTLR8a1 and omTLR8a2 in healthy trout were highest in spleen tissue followed by anterior and then posterior kidney tissues. Rainbow trout anterior kidney leukocytes produced elevated levels of

  1. Amplification of rainbow trout microsatellites in Brachymystax lenok.

    Science.gov (United States)

    Jia, Z Y; Zhang, Y Y; Shi, L Y; Bai, Q L; Jin, S B; Mou, Z B

    2008-11-01

    Brachymystax lenok is a cold freshwater fish accustomed to inhabit relatively high concentration of dissolved oxygen and clean upper streams. Here we present 13 polymorphic microsatellite primer pairs from rainbow trout to amplify in 32 B. lenok individuals from Ussuri River of China. The number of alleles ranged from two to seven with an average of 3.9 per locus. Observed heterozygosity ranged from 0.0625 to 0.9677. One locus showed significant deviation from Hardy-Weinberg equilibrium. These 13 loci will provide a good basis for investigation of B. lenok population structure and genetic diversity in different distribution region. © 2008 The Authors. Journal compilation © 2008 Blackwell Publishing Ltd.

  2. CONSUMER PERCEPTIONS OF TROUT AS A FOOD ITEM

    OpenAIRE

    Foltz, John C.; Dasgupta, Siddhartha; Devadoss, Stephen

    1999-01-01

    The impacts of socioeconomic/demographic characteristics, experiences and preferences of consumers on trout purchasing decisions were estimated using Probit and Ordered Probit regression techniques. Data from a survey of consumer purchasing behavior and personal attributes were used to deduce factors that led to either a high or low likelihood of purchasing trout products. Analysis of data pertaining to whole trout and value-added products yielded consistently different characteristics of con...

  3. Metabolism of 2-acetylaminofluorene by Shasta rainbow trout

    Energy Technology Data Exchange (ETDEWEB)

    Sikka, H.C.; Elmarakaby, S.A.; Steward, R.; Maslanka, R.; Shappell, N.; Kumar, S. [State University of New York, Buffalo, NY (United States); Devanaboyina, U.; Gupta, R.C. [Univ. of Kentucky, Lexington, KY (United States)

    1994-12-31

    In contrast to several mammalian species, Shasta strain rainbow trout (Oncorhynchus mykiss), is resistant to the hepatocarcinogenic effects of 2-acetylaminofluorene (AAF). In order to understand the mechanism underlying this resistance, the authors have investigated the in vitro metabolism of AAF by trout liver and examined the formation of AAF-DNA adducts in the liver of Shasta trout treated with AAF. The major AAF metabolites produced by trout liver microsomes were 7-hydroxy-AAF and 5-hydroxy-AAF which accounted for more than 95% of the total AAF metabolites. N-hydroxy-AAF was a minor metabolite representing about 1% of total AAF metabolites. The levels of N-hydroxy-AAF sulfotransferase and N-hydroxy-AAF acyltransferase, the cytosolic enzymes implicated in the metabolic activation of N-hydroxy-AAF to reactive intermediates capable of binding to cellular macromolecules were extremely low in trout liver. AAF exhibited a low degree of binding to the liver DNA of trout treated with 15 mg AAF/kg body wt. The total AAF-DNA adduct level reached a maximum 24 hours after treatment, persisted until 11 days and declined to nearly 20% of the maximum level after 18 days. N-deoxyguanosin-8-yl-2-aminofluorene was the major AAF-DNA adduct in the trout liver. The ability of trout liver to form relatively large amounts of detoxification products of AAF with little formation of activation products may partly explain the resistance of Shasta trout to AAF-induced hepatocarcinogenesis.

  4. Climate change and vulnerability of bull trout (Salvelinus confluentus) in a fire-prone landscape.

    Science.gov (United States)

    Falke, Jeffrey A.; Flitcroft, Rebecca L; Dunham, Jason B.; McNyset, Kristina M.; Hessburg, Paul F.; Reeves, Gordon H.

    2015-01-01

    Linked atmospheric and wildfire changes will complicate future management of native coldwater fishes in fire-prone landscapes, and new approaches to management that incorporate uncertainty are needed to address this challenge. We used a Bayesian network (BN) approach to evaluate population vulnerability of bull trout (Salvelinus confluentus) in the Wenatchee River basin, Washington, USA, under current and future climate and fire scenarios. The BN was based on modeled estimates of wildfire, water temperature, and physical habitat prior to, and following, simulated fires throughout the basin. We found that bull trout population vulnerability depended on the extent to which climate effects can be at least partially offset by managing factors such as habitat connectivity and fire size. Moreover, our analysis showed that local management can significantly reduce the vulnerability of bull trout to climate change given appropriate management actions. Tools such as our BN that explicitly integrate the linked nature of climate and wildfire, and incorporate uncertainty in both input data and vulnerability estimates, will be vital in effective future management to conserve native coldwater fishes.

  5. Traditional ecological knowledge reveals the extent of sympatric lake trout diversity and habitat preferences

    Directory of Open Access Journals (Sweden)

    Kia Marin

    2017-06-01

    Full Text Available Multidisciplinary approaches to conservation have become increasingly important in northern regions. Because many First Nations communities have relied on freshwater fish populations for essential food over millennia, community members often possess traditional ecological knowledge (TEK. We consulted Cree First Nation fishers to collate TEK for one of Canada's most important subsistence fishes (lake trout in Québec's largest lake (Mistassini, 2335 km2. We further integrated TEK with what was regionally known scientifically about the species, toward effective fisheries conservation. Cree fishers described a richer diversity of sympatric lake trout forms than did scientific research that was conducted simultaneously, based on color, size, fin accent patterns, scale texture and depth, and spatial preferences. Traditional ecological knowledge also provided descriptions of lake trout seasonal movements, spawning locations, and reproductive timing that were not captured by scientific research, and highlighted several concerns or temporal changes of import to future management initiatives. Our study highlights the wealth of TEK on harvested species in First Nations communities. It further illustrates how TEK can reveal not only distinctions within species of relevance to natural resource management and taxonomy, but also informs upon the extent of such population differentiation, thereby providing important conservation benefits for remote and northern regions.

  6. Science in Flux: NASA's Nuclear Program at Plum Brook Station 1955-2005

    Science.gov (United States)

    Bowles, Mark D.

    2006-01-01

    Science in Flux traces the history of one of the most powerful nuclear test reactors in the United States and the only nuclear facility ever built by NASA. In the late 1950's NASA constructed Plum Brook Station on a vast tract of undeveloped land near Sandusky, Ohio. Once fully operational in 1963, it supported basic research for NASA's nuclear rocket program (NERVA). Plum Brook represents a significant, if largely forgotten, story of nuclear research, political change, and the professional culture of the scientists and engineers who devoted their lives to construct and operate the facility. In 1973, after only a decade of research, the government shut Plum Brook down before many of its experiments could be completed. Even the valiant attempt to redefine the reactor as an environmental analysis tool failed, and the facility went silent. The reactors lay in costly, but quiet standby for nearly a quarter-century before the Nuclear Regulatory Commission decided to decommission the reactors and clean up the site. The history of Plum Brook reveals the perils and potentials of that nuclear technology. As NASA, Congress, and space enthusiasts all begin looking once again at the nuclear option for sending humans to Mars, the echoes of Plum Brook's past will resonate with current policy and space initiatives.

  7. HPLC and ELISA analyses of larval bile acids from Pacific and western brook lampreys

    Science.gov (United States)

    Yun, S.-S.; Scott, A.P.; Bayer, J.M.; Seelye, J.G.; Close, D.A.; Li, W.

    2003-01-01

    Comparative studies were performed on two native lamprey species, Pacific lamprey (Lampetra tridentata) and western brook lamprey (Lampetra richardsoni) from the Pacific coast along with sea lamprey (Petromyzon marinus) from the Great Lakes, to investigate their bile acid production and release. HPLC and ELISA analyses of the gall bladders and liver extract revealed that the major bile acid compound from Pacific and western brook larval lampreys was petromyzonol sulfate (PZS), previously identified as a migratory pheromone in larval sea lamprey. An ELISA for PZS has been developed in a working range of 20pg-10ng per well. The tissue concentrations of PZS in gall bladder were 127.40, 145.86, and 276.96??g/g body mass in sea lamprey, Pacific lamprey, and western brook lamprey, respectively. Releasing rates for PZS in the three species were measured using ELISA to find that western brook and sea lamprey released PZS 20 times higher than Pacific lamprey did. Further studies are required to determine whether PZS is a chemical cue in Pacific and western brook lampreys. ?? 2003 Elsevier Inc. All rights reserved.

  8. Diagenesis of the Lisburne Group, northeastern Brooks Range, Alaska

    Energy Technology Data Exchange (ETDEWEB)

    Carlson, R.C.; Goldstein, R.H.; Enos, P. [and others

    1995-05-01

    Petrographic cathodoluminescence studies of the cement stratigraphy of the Lisburne Group yield insights on its diagenetic history. Crosscutting relationships between features of subaerial exposure and calcite cements show that early generations of nonferroan, nonluminescent and multibanded-luminescent calcites are synchronous with or postdated by subaerial exposure surfaces within the Lisburne. Surfaces of subaerial exposure occur at 18 horizons within the Lisburne and are distinguished by features as laminated crusts, rhizoliths, autoclastic breccia, fissure fills, mud cracks, and erosional surfaces. Crosscutting relationships also occur between calcite cements and clasts in karst breccias and conglomerates that formed along the sub-Permian unconformity at the top of the Lisburne. The sub-Permian unconformity postdates later generations of calcite cement. These cements formed in the following sequence: nonferroan to low-ferroan, dully luminescent calcite; ferroan, very-dully luminescent calcite; and second generation of nonferroan, multibanded calcite. The crosscutting relationships not only constrain the timing of cement precipitation, but also suggest that the cements probably were precipitated from meteoric groundwaters introduced during subaerial exposure of the Lisburne platform. Late cements in the Lisburne postdate the Permian Echooka Formation. These cements are low-ferroan, moderately-bright to dully luminescent calcite, followed by a second generation of ferroan, very-dully luminescent calcite. Features of compaction and pressure solution are coincident with the precipitation of the late ferroan calcite and further constrain its timing to deep burial of the Lisburne. The youngest phase of calcite cement precipitated in the Lisburne Group is nonferroan, very-dully luminescent calcite. It commonly fills tectonically-induced shear fractures, indicating precipitation after the onset of Cretaceous (and/or Cenozoic) tectonism in the northeastern Brooks Range.

  9. Discovery and characterization of single-nucleotide polymorphisms in steelhead/rainbow trout, Oncorhynchus mykiss.

    Science.gov (United States)

    Abadía-Cardoso, Alicia; Clemento, Anthony J; Garza, John Carlos

    2011-03-01

    Single-nucleotide polymorphisms (SNPs) have several advantages over other genetic markers, including lower mutation and genotyping error rates, ease of inter-laboratory standardization, and the prospect of high-throughput, low-cost genotyping. Nevertheless, their development and use has only recently moved beyond model organisms to groups such as salmonid fishes. Oncorhynchus mykiss is a salmonid native to the North Pacific rim that has now been introduced throughout the world for fisheries and aquaculture. The anadromous form of the species is known as steelhead. Native steelhead populations on the west coast of the United States have declined and many now have protected status. The nonanadromous, or resident, form of the species is termed rainbow, redband or golden trout. Additional life history and morphological variation, and interactions between the forms, make the species challenging to study, monitor and evaluate. Here, we describe the discovery, characterization and assay development for 139 SNP loci in steelhead/rainbow trout. We used EST sequences from existing genomic databases to design primers for 480 genes. Sanger-sequencing products from these genes provided 130 KB of consensus sequence in which variation was surveyed for 22 individuals from steelhead, rainbow and redband trout groups. The resulting TaqMan assays were surveyed in five steelhead populations and three rainbow trout stocks, where they had a mean minor allele frequency of 0.15-0.26 and observed heterozygosity of 0.18-0.35. Mean F(ST) was 0.204. The development of SNPs for O. mykiss will help to provide highly informative genetic tools for individual and stock identification, pedigree reconstruction, phylogeography and ecological investigation. © 2011 Blackwell Publishing Ltd.

  10. A Computational Model of the Rainbow Trout Hypothalamus-Pituitary-Ovary-Liver Axis.

    Directory of Open Access Journals (Sweden)

    Kendall Gillies

    2016-04-01

    Full Text Available Reproduction in fishes and other vertebrates represents the timely coordination of many endocrine factors that culminate in the production of mature, viable gametes. In recent years there has been rapid growth in understanding fish reproductive biology, which has been motivated in part by recognition of the potential effects that climate change, habitat destruction and contaminant exposure can have on natural and cultured fish populations. New approaches to understanding the impacts of these stressors are being developed that require a systems biology approach with more biologically accurate and detailed mathematical models. We have developed a multi-scale mathematical model of the female rainbow trout hypothalamus-pituitary-ovary-liver axis to use as a tool to help understand the functioning of the system and for extrapolation of laboratory findings of stressor impacts on specific components of the axis. The model describes the essential endocrine components of the female rainbow trout reproductive axis. The model also describes the stage specific growth of maturing oocytes within the ovary and permits the presence of sub-populations of oocytes at different stages of development. Model formulation and parametrization was largely based on previously published in vivo and in vitro data in rainbow trout and new data on the synthesis of gonadotropins in the pituitary. Model predictions were validated against several previously published data sets for annual changes in gonadotropins and estradiol in rainbow trout. Estimates of select model parameters can be obtained from in vitro assays using either quantitative (direct estimation of rate constants or qualitative (relative change from control values approaches. This is an important aspect of mathematical models as in vitro, cell-based assays are expected to provide the bulk of experimental data for future risk assessments and will require quantitative physiological models to extrapolate across

  11. Genetic Diversity and Conservation of the Prespa Trout in the Balkans

    Directory of Open Access Journals (Sweden)

    Patrick Berrebi

    2013-11-01

    Full Text Available The Balkans are known to have a high level of biodiversity and endemism. No less than 15 taxa have been recorded in salmonids of the Salmo genus. Among them, the Prespa trout is found in only four river systems flowing into Lake Macro Prespa, three in the Former Yugoslav Republic of Macedonia and one in Greece. This is the first comprehensive survey of all streams located within the Macro Prespa Basin, encompassing the whole taxon range. A large genetic sample of 536 Prespa trout was collected mainly between 2005 and 2007. The sampling included 59 individuals from the Golema river system, 93 from the Kranska, 260 from the Brajcinska, 119 from the Agios Germanos, and five individuals from the lake itself. These specimens were analyzed with six microsatellite markers and by sequencing the mitochondrial control region. Nuclear data were examined through multidimensional analysis and assignment tests. Five clusters were detected by assignment: Golema, Kranska, Brajcinska upstream, Rzanska Brajcinska tributary and Brajcinska downstream. Most of these river systems thus hosted differentiated Prespa trout populations (with past gene flows likely dating before the construction of dams, except Agios Germanos, which was found to be composed of 5% to 32% of each cluster. Among the five trout individuals from the lake, four originated from Kranska River and one was admixed. Supported parsimonious hypotheses are proposed to explain these specificities. Conservation of this endemic taxon should take these results into account. No translocation should be performed between different tributaries of the lake and preservation of the Brajcinska populations should address the upstream-downstream differentiation described.

  12. Risk of Myxobolus cerebralis infection to rainbow trout in the Madison River, Montana, USA

    Science.gov (United States)

    Krueger, R.C.; Kerans, B.L.; Vincent, E.R.; Rasmussen, C.

    2006-01-01

    Myxobolus cerebralis, the parasite that causes salmonid whirling disease, has had detrimental effects on several salmonid populations in the Intermountain West, including the rainbow trout in the Madison River, Montana, USA. The goal of this study was to examine relationships among characteristics of the environment, Tubifex tubifex (the alternate host) populations, and rainbow trout whirling disease risk in the Madison River. Environmental characteristics were measured in side channels of the Madison River, and differences were described with a principal components analysis. The density of T. tubifex, the prevalence of infection in T. tubifex, and the density of infected T. tubifex were determined for the side channels using benthic core samples and examination of live tubificids for infection. The site-specific contribution to whirling disease risk in the side channels was determined using in situ exposures of sentinel rainbow trout. Regression analyses were used to determine correlations among these characteristics. Side channels differed in site-specific contribution to rainbow trout whirling disease risk, which was positively correlated to the density of infected T. tubifex. Side channels with fine sediments and lower water temperatures made greater site-specific contribution to whirling disease risk and had higher densities of infected T. tubifex than side channels with coarser sediments and higher temperatures. The ability to characterize areas of high whirling disease risk is essential for improving our understanding of the dynamics of M. cerebralis such that appropriate management strategies can be implemented. In addition, this study provides a model of how the disease ecology of complex aquatic parasites can be examined when the influential processes operate on different spatial scales. ?? 2006 by the Ecological Society of America.

  13. Morphological Divergence of Snow Trout (Schizothorax Richardsonii, Gray 1932) from Rivers of Nepal with Insights from a Morphometric Analysis

    OpenAIRE

    Suresh Kumar Wagle; Neeta Pradhan; Madhav Kumar Shrestha

    2015-01-01

    Asala or snow trout (Schizothorax richardsonii, Cyprinidae), one of highly valued freshwater fish of Transhimalayan regions, is distributed in upper reaches of all major river systems of Nepal. Morphometric diversification between six river populations of S. richardsonii was examined to identify intraspecific unit for enabling better management of the resources. Significant differences were observed in 17 measured morphometric characters of 207 specimens among the six river populations. Multi...

  14. Morphological variation in a secondary contact between divergent lineages of brown trout (Salmo trutta) from the Iberian Peninsula

    OpenAIRE

    Miguel Hermida; Eduardo San Miguel; Carmen Bouza; Jaime Castro; Paulino Martínez

    2009-01-01

    The aim of this study was to analyze the morphological variation of brown trout (Salmo trutta) in the Duero basin, an Atlantic river basin in the Iberian Peninsula, where a spatial segregation of two divergent lineages was previously reported, based on isozyme, microsatellite and mtDNA data. In these studies, two divergent pure regions (Pisuerga and Lower-course) and several hybrid populations between them were identified. Morphological variation was evaluated in 11 populations representative...

  15. Comparison of biochemical parameters of rainbow trout (Oncorhynchus mykiss) reared in two different trout farms'

    Science.gov (United States)

    Karatas, Tayfun

    2016-04-01

    The aim of this study was to compare biochemical parameters of cultured rainbow trouts (Oncorhynchus mykiss, Walbaum, 1972) reared in two different trout farms' (Agri and Erzurum). The average weights of fish were 150±10gr for first station (Agri), 230±10gr for second station (Erzurum). Fishes used in research were randomly caught from pools, and fifteen pieces were used for each group. Fishes were fed with commercial trout feed with 45-50% crude protein twice a day. The levels of AST, ALT, LDL, total cholesterol and triglyceride in the second station (Erzurum) were found to be higher (pHDL in the second station (Erzurum) were found to be lower (pHDL, LDL, triglyceride may be associated with size, sex, sexual maturity and environmental conditions (temperature, pH, hardness and dissolved oxygen).

  16. LopheliaII2012: Coral Research on Oil Rigs in the Gulf of Mexico on TDI-Brooks Vessel Brooks McCall between 2012-07-12 and 2012-07-24

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The final year of a multi-year effort to study Lophelia coral communities in the Gulf of Mexico is occurring on the TDI-Brooks research vessel, Brooks McCall,...

  17. Evolution and origin of sympatric shallow-water morphotypes of Lake Trout, Salvelinus namaycush, in Canada's Great Bear Lake.

    Science.gov (United States)

    Harris, L N; Chavarie, L; Bajno, R; Howland, K L; Wiley, S H; Tonn, W M; Taylor, E B

    2015-01-01

    Range expansion in north-temperate fishes subsequent to the retreat of the Wisconsinan glaciers has resulted in the rapid colonization of previously unexploited, heterogeneous habitats and, in many situations, secondary contact among conspecific lineages that were once previously isolated. Such ecological opportunity coupled with reduced competition likely promoted morphological and genetic differentiation within and among post-glacial fish populations. Discrete morphological forms existing in sympatry, for example, have now been described in many species, yet few studies have directly assessed the association between morphological and genetic variation. Morphotypes of Lake Trout, Salvelinus namaycush, are found in several large-lake systems including Great Bear Lake (GBL), Northwest Territories, Canada, where several shallow-water forms are known. Here, we assess microsatellite and mitochondrial DNA variation among four morphotypes of Lake Trout from the five distinct arms of GBL, and also from locations outside of this system to evaluate several hypotheses concerning the evolution of morphological variation in this species. Our data indicate that morphotypes of Lake Trout from GBL are genetically differentiated from one another, yet the morphotypes are still genetically more similar to one another compared with populations from outside of this system. Furthermore, our data suggest that Lake Trout colonized GBL following dispersal from a single glacial refugium (the Mississippian) and support an intra-lake model of divergence. Overall, our study provides insights into the origins of morphological and genetic variation in post-glacial populations of fishes and provides benchmarks important for monitoring Lake Trout biodiversity in a region thought to be disproportionately susceptible to impacts from climate change.

  18. Testing for local adaptation in brown trout using reciprocal transplants

    Directory of Open Access Journals (Sweden)

    Stelkens Rike B

    2012-12-01

    Full Text Available Abstract Background Local adaptation can drive the divergence of populations but identification of the traits under selection remains a major challenge in evolutionary biology. Reciprocal transplant experiments are ideal tests of local adaptation, yet rarely used for higher vertebrates because of the mobility and potential invasiveness of non-native organisms. Here, we reciprocally transplanted 2500 brown trout (Salmo trutta embryos from five populations to investigate local adaptation in early life history traits. Embryos were bred in a full-factorial design and raised in natural riverbeds until emergence. Customized egg capsules were used to simulate the natural redd environment and allowed tracking the fate of every individual until retrieval. We predicted that 1 within sites, native populations would outperform non-natives, and 2 across sites, populations would show higher performance at ‘home’ compared to ‘away’ sites. Results There was no evidence for local adaptation but we found large differences in survival and hatching rates between sites, indicative of considerable variation in habitat quality. Survival was generally high across all populations (55% ± 3%, but ranged from 4% to 89% between sites. Average hatching rate was 25% ± 3% across populations ranging from 0% to 62% between sites. Conclusion This study provides rare empirical data on variation in early life history traits in a population network of a salmonid, and large-scale breeding and transplantation experiments like ours provide powerful tests for local adaptation. Despite the recently reported genetic and morphological differences between the populations in our study area, local adaptation at the embryo level is small, non-existent, or confined to ecological conditions that our experiment could not capture.

  19. Kilgore Trout - He Tried : en tematisk analyse av Kilgore Trouts rolle i forfatterskapet til Kurt Vonnegut

    OpenAIRE

    Glomsrød, Jannicke Storm

    2007-01-01

    Hvilke roller og funksjoner innehar Kilgore Trout-karakteren i Kurt Vonneguts forfatterskap? Hvilken betydning har han og hva ligger til grunn for denne gjennomgangsfigurens ankomst og endelige avgang i litteraturen? I denne oppgaven søker jeg å undersøke og finne svaret på disse spørsmålene. Kilgore Trout går igjen i syv av Vonneguts fjorten romaner og er en gjennomgangsfigur i drøye 32 år av dennes forfatterskap, som strekker seg over 53 år med Player Piano fra 1952 i den ene enden og A ...

  20. Field report: Exploring the Doonerak fenster of the central Brooks Range, Alaska, USA

    Directory of Open Access Journals (Sweden)

    Justin V. Strauss

    2017-07-01

    Full Text Available Arctic Alaska is a ‘suspect’ terrane that encompasses approximately 20% of Alaska, stretching from the southern Brooks Range all the way to the continental shelves of the Chukchi and Beaufort Seas. Although the origin and subsequent travels of this large crustal fragment are debated among geologists, most researchers agree upon its composite nature and exotic origin. To constrain the early geological history of this terrane, we describe a recent expedition to the Doonerak fenster of the central Brooks Range. This area has long been regarded as a key locality for understanding the structural evolution of the Mesozoic–Cenozoic Brooks Range orogen; however, our target was different: a unique sequence of volcanic and siliciclastic rocks (Apoon assemblage exposed beneath a profound pre-Mississippian unconformity, which we argue is of key importance to understanding the early Paleozoic tectonic history of northern Alaska and the greater Arctic.

  1. William Keith Brooks and the naturalist's defense of Darwinism in the late-nineteenth century.

    Science.gov (United States)

    Nash, Richard

    2015-06-01

    William Keith Brooks was an American zoologist at Johns Hopkins University from 1876 until his death in 1908. Over the course of his career, Brooks staunchly defended Darwinism, arguing for the centrality of natural selection in evolutionary theory at a time when alternative theories, such as neo-Lamarckism, grew prominent in American biology. In his book The Law of Heredity (1883), Brooks addressed problems raised by Darwin's theory of pangenesis. In modifying and developing Darwin's pangenesis, Brooks proposed a new theory of heredity that sought to avoid the pitfalls of Darwin's hypothesis. In so doing he strengthened Darwin's theory of natural selection by undermining arguments for the inheritance of acquired characteristics. In later attacks on neo-Lamarckism, Brooks consistently defended Darwin's theory of natural selection on logical grounds, continued to challenge the idea of the inheritance of acquired characteristics, and argued that natural selection best explained a wide range of adaptations. Finally, he critiqued Galton's statistical view of heredity and argued that Galton had resurrected an outmoded typological concept of species, one which Darwin and other naturalists had shown to be incorrect. Brooks's ideas resemble the "biological species concept" of the twentieth century, as developed by evolutionary biologist Ernst Mayr and others. The late-nineteenth century was not a period of total "eclipse" of Darwinism, as biologists and historians have hitherto seen it. Although the "Modern Synthesis" refers to the reconciliation of post-Mendelian genetics with evolution by natural selection, we might adjust our understanding of how the synthesis developed by seeing it as the culmination of a longer discussion that extends back to the late-nineteenth century.

  2. SuchThatCast Episode 3: J.D. Trout

    NARCIS (Netherlands)

    Soraker, Johnny

    2012-01-01

    SuchThatCast goes mobile in the third episode, as I interview J.D. Trout on the appr. 2 hour train ride between Enschede and Schiphol airport. Trout received his PhD in Philosophy at Cornell University and is currently Professor of Philosophy and Psychology at Loyola University Chicago. He was

  3. Formation of chromosome aberrations in androgenetic rainbow trout Oncorhynchus mykiss.

    Science.gov (United States)

    Ocalewicz, K; Dobosz, S; Kuzminski, H; Goryczko, K

    2009-12-01

    Residues of maternal nuclear DNA in the form of chromosome fragments were observed in the healthy and morphologically normal androgenetic rainbow trout Oncorhynchus mykiss. A hypothetical model for formation of chromosome re-arrangements caused by the incomplete maternal nuclear DNA inactivation in the androgenetic rainbow trout was proposed in the present paper.

  4. SuchThatCast Episode 3: J.D. Trout

    NARCIS (Netherlands)

    Søraker, J.H.

    2012-01-01

    SuchThatCast goes mobile in the third episode, as I interview J.D. Trout on the appr. 2 hour train ride between Enschede and Schiphol airport. Trout received his PhD in Philosophy at Cornell University and is currently Professor of Philosophy and Psychology at Loyola University Chicago. He was recen

  5. Structure of the Red Dog District, western Brooks Range, Alaska

    Science.gov (United States)

    de Vera, Jean-Pierre P.; McClay, K. R.

    2004-01-01

    The Red Dog district of the western Brooks Range of northern Alaska, which includes the sediment-hosted Zn-Pb-Ag ± Ba deposits at Red Dog, Su-Lik, and Anarraaq, contains one of the world's largest reserves of zinc. This paper presents a new model for the structural development of the area and shows that understanding the structure is crucial for future exploration efforts and new mineral discoveries in the district. In the Red Dog district, a telescoped Late Devonian through Jurassic continental passive margin is exposed in a series of subhorizontally stacked, internally imbricated, and regionally folded thrust sheets. These sheets were emplaced during the Middle Jurassic to Late Cretaceous Brookian orogeny and subsequently were uplifted by late tectonic activity in the Tertiary. The thrust sheet stack comprises seven tectonostratigraphically distinct allochthonous sheets, three of which have been subject to regional and detailed structural analysis. The lowermost of these is the Endicott Mountains allochthon, which is overlain by the structurally higher Picnic Creek and Kelly River allochthons. Each individual allochthon is itself internally imbricated into a series of tectonostratigraphically coherent and distinct thrust plates and subplates. This structural style gives rise to duplex development and imbrication at a range of scales, from a few meters to tens of kilometers. The variable mechanical properties of the lithologic units of the ancient passive margin resulted in changes in structural styles and scales of structures across allochthon boundaries. Structural mapping and analysis of the district indicate a dominant northwest to west-northwest direction of regional tectonic transport. Local north to north-northeast transport of thrust sheets is interpreted to reflect the influence of underlying lateral and/or oblique ramps, which may have been controlled by inherited basin margin structures. Some thrust-sheet stacking patterns suggest out

  6. Transcriptional heterogeneity of IgM+ cells in rainbow trout (Oncorhynchus mykiss) tissues.

    Science.gov (United States)

    Abós, Beatriz; Castro, Rosario; Pignatelli, Jaime; Luque, Alfonso; González, Lucia; Tafalla, Carolina

    2013-01-01

    TWO major classes of b lymphocytes have been described to date in rainbow trout: IgM(+) and IgT(+) cells. IgM(+) cells are mainly localized in the spleen, peripheral blood and kidney but are also found in other tissues. However, differences among IgM(+) cell populations attending to its location are poorly defined in fish. Thus, the aim of this work was to characterize the expression of different immune molecules such as chemokine receptors, Toll-like receptors (TLRs) and transcription factors on sorted IgM(+) lymphocytes from different rainbow trout tissues. IgM(+) populations from blood, spleen, kidney, gills, intestine and liver were isolated by cell sorting and the constitutive levels of transcription of these genes evaluated by real-time PCR. To further characterize B cells, we identified an MS4A sequence. In humans, the MS4A family includes several genes with immune functions, such as the B cell marker CD20 or FcRβ. Subsequently, we have also evaluated the mRNA levels of this MS4A gene in the different IgM(+) populations. The relevant differences in transcriptional patterns observed for each of these IgM(+) populations analyzed, point to the presence of functionally different tissue-specific B cell populations in rainbow trout. The data shown provides a pattern of genes transcribed in IgM(+) B cells not previously revealed in teleost fish. Furthermore, the constitutive expression of all the TLR genes analyzed in IgM(+) cells suggests an important role for these cells in innate immunity.

  7. Quality assessment of salted, modified atmosphere packaged rainbow trout under treatment with oregano essential oil.

    Science.gov (United States)

    Pyrgotou, Nikoletta; Giatrakou, Vasiliki; Ntzimani, Athina; Savvaidis, Ioannis N

    2010-09-01

    The present study evaluated the effect of oregano essential oil (EO) on fresh salted, packaged (45%CO(2)/5%O(2)/50%N(2)) rainbow trout fillets and stored for a period of 21 d at 4 °C. Treatments included the following: M1 (control without added EO), M2 (EO 0.2%, v/w), and M3 (0.4%, v/w). Populations of lactic acid bacteria (LAB), H(2)S-producing bacteria (including Shewanella putrefaciens), Enterobacteriaceae, and Pseudomonas spp. reached higher final numbers in control (M1) than for M2 and M3 samples. Under treatments M2 and M3, total volatile basic nitrogen (TVBN) and trimethylamine nitrogen (TMAN) values were lower than for M1 samples, whereas lipid oxidation, as judged by determination of thiobarbituric acid values (TBA), did not occur during the refrigerated storage period. Interestingly, treatment M2 resulted in a shelf-life extension of 7 to 8 d for the fresh trout fillets, whereas treatment M3 proved unsuitable (due to strong odor) for trout fillet preservation, as determined by sensory evaluation. The use of an essential oil such as oregano oil in fresh fish preservation may be considered an alternative "natural" additive, enhancing the sensory characteristics and extending the shelf life of the product.

  8. Hybridization rapidly reduces fitness of a native trout in the wild

    Science.gov (United States)

    Muhlfeld, C.C.; Kalinowski, S.T.; McMahon, T.E.; Taper, M.L.; Painter, S.; Leary, R.F.; Allendorf, F.W.

    2009-01-01

    Human-mediated hybridization is a leading cause of biodiversity loss worldwide. How hybridization affects fitness and what level of hybridization is permissible pose difficult conservation questions with little empirical information to guide policy and management decisions. This is particularly true for salmonids, where widespread introgression among non-native and native taxa has often created hybrid swarms over extensive geographical areas resulting in genomic extinction. Here, we used parentage analysis with multilocus microsatellite markers to measure how varying levels of genetic introgression with non-native rainbow trout (Oncorhynchus mykiss) affect reproductive success (number of offspring per adult) of native westslope cutthroat trout (Oncorhynchus clarkii lewisi) in the wild. Small amounts of hybridization markedly reduced fitness of male and female trout, with reproductive success sharply declining by approximately 50 per cent, with only 20 per cent admixture. Despite apparent fitness costs, our data suggest that hybridization may spread due to relatively high reproductive success of first-generation hybrids and high reproductive success of a few males with high levels of admixture. This outbreeding depression suggests that even low levels of admixture may have negative effects on fitness in the wild and that policies protecting hybridized populations may need reconsideration. ?? 2009 The Royal Society.

  9. Molecular crosstalk between a chemical and a biological stressor and consequences on disease manifestation in rainbow trout

    Energy Technology Data Exchange (ETDEWEB)

    Burki, Richard [Centre for Fish and Wildlife Health, University of Bern, Laenggassstrasse 122, CH-3001 Bern (Switzerland); Krasnov, Aleksei [NOFIMA Marin, Postboks. 5010, 1432As (Norway); Bettge, Kathrin [Centre for Fish and Wildlife Health, University of Bern, Laenggassstrasse 122, CH-3001 Bern (Switzerland); Rexroad, Caird E. [National Center for Cool and Cold Water Aquaculture, USDA-ARS, 11876 Leetown Road, Kearneysville, WV 25430 (United States); Afanasyev, Sergey [Sechenov Institute of Evolutionary Physiology and Biochemistry, M. Toreza av. 44, Peterburg 194223 (Russian Federation); Antikainen, Miia [Institute of Applied Biotechnology, University of Kuopio (Finland); Burkhardt-Holm, Patricia [Man-Society-Environment, University of Basel, Vesalgasse 1, CH-4051 Basel (Switzerland); Wahli, Thomas [Centre for Fish and Wildlife Health, University of Bern, Laenggassstrasse 122, CH-3001 Bern (Switzerland); Segner, Helmut, E-mail: helmut.segner@vetsuisse.unibe.ch [Centre for Fish and Wildlife Health, University of Bern, Laenggassstrasse 122, CH-3001 Bern (Switzerland)

    2013-02-15

    The aim of the present study was to examine the molecular and organism reaction of rainbow trout, Oncorhynchus mykiss, to the combined impact of two environmental stressors. The two stressors were the myxozoan parasite, Tetracapsuloides bryosalmonae, which is the etiological agent of proliferative kidney disease (PKD) and a natural stressor to salmonid populations, and 17{beta}-estradiol (E2) as prototype of estrogen-active chemical stressors in the aquatic environment. Both stressors, the parasite and estrogenic contaminants, co-exist in Swiss rivers and are discussed as factors contributing to the decline of Swiss brown trout populations over the last decades. Using a microarray approach contrasting parasite-infected and non-infected rainbow trout at low or high estrogen levels, it was observed that molecular response patterns under joint exposure differed from those to the single stressors. More specifically, three major response patterns were present: (i) expression responses of gene transcripts to one stressor are weakened by the presence of the second stressor; (ii) expression responses of gene transcripts to one stressor are enhanced by the presence of the second stressor; (iii) expression responses of gene transcripts at joint treatment are dominated by one of the two stressors. Organism-level responses to concurrent E2 and parasite treatment - assessed through measuring parasite loads in the fish host and cumulative mortalities of trout - were dominated by the pathogen, with no modulating influence of E2. The findings reveal function- and level-specific responses of rainbow trout to stressor combinations, which are only partly predictable from the response to the single stressors.

  10. Life history diversity of Snake River finespotted cutthroat trout: managing for persistence in a rapidly changing environment

    Science.gov (United States)

    Homel, Kristen M.; Gresswell, Robert E.; Kershner, Jeffrey L.

    2015-01-01

    Over the last century, native trout have experienced dramatic population declines, particularly in larger river systems where habitats associated with different spawning life history forms have been lost through habitat degradation and fragmentation. The resulting decrease in life history diversity has affected the capacity of populations to respond to environmental variability and disturbance. Unfortunately, because few large rivers are intact enough to permit full expression of life history diversity, it is unclear what patterns of diversity should be a conservation target. In this study, radiotelemetry was used to identify spawning and migration patterns of Snake River Finespotted Cutthroat Trout Oncorhynchus clarkii behnkei in the upper Snake River. Individuals were implanted with radio tags in October 2007 and 2008, and monitored through October 2009. Radio-tagged cutthroat trout in the upper Snake River exhibited variation in spawning habitat type and location, migration distance, spawn timing, postspawning behavior, and susceptibility to mortality sources. Between May and July, Cutthroat Trout spawned in runoff-dominated tributaries, groundwater-dominated spring creeks, and side channels of the Snake River. Individuals migrated up to 101 km from tagging locations in the upper Snake River to access spawning habitats, indicating that the upper Snake River provided seasonal habitat for spawners originating throughout the watershed. Postspawning behavior also varied; by August each year, 28% of spring-creek spawners remained in their spawning location, compared with 0% of side-channel spawners and 7% of tributary spawners. These spawning and migration patterns reflect the connectivity, habitat diversity, and dynamic template of the Snake River. Ultimately, promoting life history diversity through restoration of complex habitats may provide the most opportunities for cutthroat trout persistence in an environment likely to experience increased variability from

  11. Metals-contaminated benthic invertebrates in the Clark Fork River, Montana: Effects on age-0 brown trout and rainbow trout

    Science.gov (United States)

    Woodward, Daniel F.; Farag, Aïda M.; Bergman, Harold L.; Delonay, Aaron J.; Little, Edward E.; Smiths, Charlie E.; Barrows, Frederic T.

    1995-01-01

    Benthic organisms in the upper Clark Fork River have recently been implicated as a dietary source of metals that may be a chronic problem for young-of-the-year rainbow trout (Oncorhynchus mykiss). In this present study, early life stage brown trout (Salmo trutta) and rainbow trout were exposed for 88 d to simulated Clark Fork River water and a diet of benthic invertebrates collected from the river. These exposures resulted in reduced growth and elevated levels of metals in the whole body of both species. Concentrations of As, Cd, Cu, and Pb increased in whole brown trout; in rainbow trout, As and Cd increased in whole fish, and As also increased in liver. Brown trout on the metals-contaminated diets exhibited constipation, gut impaction, increased cell membrane damage (lipid peroxidation), decreased digestive enzyme production (zymogen), and a sloughing of intestinal mucosal epithelial cells. Rainbow trout fed the contaminated diets exhibited constipation and reduced feeding activity. We believe that the reduced standing crop of trout in the Clark Fork River results partly from chronic effects of metals contamination in benthic invertebrates that are important as food for young-of-the-year fish.

  12. Exposure to sublethal levels of PCB-126 impacts fuel metabolism and swimming performance in rainbow trout.

    Science.gov (United States)

    Bellehumeur, Karyne; Lapointe, Dominique; Cooke, Steven J; Moon, Thomas W

    2016-09-01

    Polychlorinated biphenyls (PCBs) are recognized physiological stressors to fish which over time may impair individual performance and perhaps fitness by inducing changes that could have population-level consequences. PCB-126 (3,3',4,4',5-pentachlorobiphenyl) accumulates in lipids and can subsequently be released into the bloodstream during periods of high activity that involve the mobilization of stored fuels to meet with increasing energy demands. The goal of this study was to determine if a sublethal exposure to PCB-126 altered the content of tissue energy supplies (carbohydrates, proteins, amino acids, triglycerides) and impaired swimming performance as well as oxygen consumption in rainbow trout (Oncorhynchus mykiss). Trout were injected intraperitoneally with a single Low (100μgkg(-1)) or High (400μgkg(-1)) dose of PCB-126 then swimming performance and metabolic rates from 1 to 9days post-injection were compared to Control (non-dosed) fish. Liver ethoxyresorufin-O-deethylase (EROD) activity was assessed as an indication of PCB-126 intoxication while plasma and white muscle tissue metabolites were analyzed as an index of physiological disturbance. Swimming performance, assessed using two successive modified critical swimming speed (Ucrit) tests, was highest for fish in the High PCB-126 treatment; however, their initial condition factor (K) was also higher, largely due to their greater body mass. Trout in the High and Low PCB-126 treatments exhibited impaired recovery following intense exercise as they swam comparatively poorly when provided a second challenge. PCB-exposed fish exhibited reduced spleen somatic indices as well as muscle glucose and glycogen contents; whereas plasma cortisol and glucose levels were elevated, indicating higher metabolic costs during recovery and muscle restoration. Overall, this research provides insights into the sublethal effects of a toxic organic compound on swimming performance in trout.

  13. Sensitivity of early life stages of white sturgeon, rainbow trout, and fathead minnow to copper.

    Science.gov (United States)

    Vardy, David W; Oellers, Johanna; Doering, Jon A; Hollert, Henner; Giesy, John P; Hecker, Markus

    2013-01-01

    Populations of white sturgeon (WS; Acipenser transmontanus) are in decline in several parts of the United States and Canada, attributed primarily to poor recruitment caused by degradation of habitats, including pollution with contaminants such as metals. Little is known about sensitivity of WS to contaminants or metals such as copper (Cu). Here, acute (96 h) mortalities of WS early life stages due to exposure to Cu under laboratory conditions are reported. Two standard test species, rainbow trout (Oncorhynchus mykiss) and fathead minnow (Pimephales promelas), were exposed in parallel to determine relative sensitivity among species. Swim-up larvae [15 days post-hatch (dph)] and early juveniles (40-45 dph) of WS were more sensitive to Cu (LC(50) = 10 and 9-17 μg/L, respectively) than were yolksac larvae (8 dph; LC(50) = 22 μg/L) and the later juvenile life stage (100 dph; LC(50) = 54 μg/L). WS were more sensitive to Cu than rainbow trout and fathead minnow at all comparable life stages tested. Yolksac larvae of rainbow trout and fathead minnow were 1.8 and 4.6 times, respectively, more tolerant than WS, while swim-up and juvenile life stages of rainbow trout were between 1.4- and 2.4-times more tolerant than WS. When plotted in a species sensitivity distribution with other fishes, the mean acute toxicity value for early life stage WS was ranked between the 1st and 2nd centile. The WS life stage of greatest Cu sensitivity coincides with the beginning of active feeding and close association with sediment, possibly increasing risk. WS early life stages are sensitive to aqueous copper exposure and site-specific water quality guidelines and criteria should be evaluated closely to ensure adequate protection.

  14. Contrasting PCB bioaccumulation patterns among Lake Huron lake trout reflect basin-specific ecology.

    Science.gov (United States)

    Paterson, Gordon; Ryder, Mark; Drouillard, Ken G; Haffner, G Douglas

    2016-01-01

    This study collected multiple age classes of lake trout from Lake Huron's Main Basin, Georgian Bay, and North Channel regions to compare and contrast top predator polychlorinated biphenyl (PCB) bioaccumulation patterns in separate compartments of the same ecosystem. Sum PCB concentrations were highest for Main Basin (260 ± 24.9 ng g(-1) wet wt) fish, followed by Georgian Bay (74.6 ± 16.2 ng g(-1) ) and North Channel (42.0 ± 3.3 ng g(-1)) fish. Discriminant functions analysis of lake trout PCB profiles and stable carbon (δ(13)C) and nitrogen (δ(15)N) isotope values clearly distinguished fish by location, indicating high degrees of basin fidelity throughout their lifetimes in addition to highly contrasting PCB bioaccumulation profiles. These unique profiles were not attributable to significant differences in lake trout lipid contents (p = 0.856) or trophic position (δ(15)N; p = 0.334), with rainbow smelt representing the primary prey across the basins. Furthermore, significant differences were observed among the basins for the relationships between PCB biomagnification factors and hydrophobicity. An empirical model for predicting PCB biomagnification in Lake Huron lake trout indicated that basin-specific population growth rates and prey abundances were significant for explaining these contrasting patterns of PCB bioaccumulation. The results of the present study are fundamental for understanding the role of ecology in legacy persistent organic pollutant (POP) bioaccumulation. Specifically, ecosystem characteristics such as prey abundances, foraging ecology, and ultimately consumer growth can regulate the variability of legacy POP bioaccumulation as observed within and among a wide range of freshwater ecosystems.

  15. Phylogenetic analysis and in situ identification of the intestinal microbial community of rainbow trout ( Oncorhynchus mykiss , Walbaum)

    DEFF Research Database (Denmark)

    Huber, I.; Spanggaard, Bettina; Appel, K.F.

    2004-01-01

    Aims: To identify the dominant culturable and nonculturable microbiota of rainbow trout intestine.Methods and Results: Microbial density of rainbow trout intestine was estimated by direct microscopic counts (4('),6-diamidino-2-phenylindole, DAPI) and by culturing on tryptone soya agar (TSA). Diff...... was seen between cultivation results and in situ analysis, however, a molecular approach was crucial for the identification of organisms uncultivated on TSA...... of rainbow trout. However, in some samples the microflora was dominated by uncultivated, presumed anaerobic, micro-organisms. The bacterial population structure of rainbow trout intestine, as well as total bacterial counts, varied from fish to fish.Significance and Impact of the Study: Good correlation...... + C content. In most samples, the aerobic count (on TSA) was 50-90% of the direct (DAPI) count. A bacterium representing a previously unknown phylogenetic lineage with only 89% 16S rRNA gene sequence similarity to Anaerofilum pentosovorans was detected in intestinal samples where aerobic counts were...

  16. The genetic approach for assessing sea trout stock enhancement efficiency – An example from the Vistula River

    Directory of Open Access Journals (Sweden)

    Wąs-Barcz Anna

    2017-06-01

    Full Text Available Many countries in the Baltic Sea basin have initiated enhancement programs for Baltic migratory sea trout, Salmo trutta L., to compensate for losses stemming from anthropogenic pressure that has resulted in the declining population abundance of this species. Regular stock enhancement has been conducted in Poland since the 1960s. Currently, over one million sea trout smolts are released into Polish rivers annually. In most Baltic countries, including Poland, stock enhancement depends on hatcheries producing material using spawners caught in native rivers. However, increasing difficulty obtaining spawners in recent years in Poland has meant that stock enhancement performed in the Vistula has been done largely with material obtained from broodstocks. Simultaneously, there is a lack of information regarding the proportion of wild and cultured sea trout in this river basin. This paper is a review of methods applied to identify individuals from natural and artificial sea trout spawning in rivers, and it proposes using genetic techniques as an alternative to traditional marking methods. A set of 13 microsatellite loci are proposed that are characterized by high selectivity. Using negative controls while simulating the assignment of parental pairs revealed that the number of loci in the set was highly significant and should not be reduced. This method could be useful in the proposed assessment of the proportions of wild and cultured fish in Polish rivers.

  17. Over the falls? Rapid evolution of ecotypic differentiation in steelhead/rainbow trout (Oncorhynchus mykiss).

    Science.gov (United States)

    Pearse, Devon E; Hayes, Sean A; Bond, Morgan H; Hanson, Chad V; Anderson, Eric C; Macfarlane, R Bruce; Garza, John Carlos

    2009-01-01

    Adaptation to novel habitats and phenotypic plasticity can be counteracting forces in evolution, but both are key characteristics of the life history of steelhead/rainbow trout (Oncorhynchus mykiss). Anadromous steelhead reproduce in freshwater river systems and small coastal streams but grow and mature in the ocean. Resident rainbow trout, either sympatric with steelhead or isolated above barrier dams or waterfalls, represent an alternative life-history form that lives entirely in freshwater. We analyzed population genetic data from 1486 anadromous and resident O. mykiss from a small stream in coastal California with multiple barrier waterfalls. Based on data from 18 highly variable microsatellite loci (He = 0.68), we conclude that the resident population above one barrier, Big Creek Falls, is the result of a recent anthropogenic introduction from the anadromous population of O. mykiss below the falls. Furthermore, fish from this above-barrier population occasionally descend over the falls and have established a genetically differentiated below-barrier subpopulation at the base of the falls, which appears to remain reproductively isolated from their now-sympatric anadromous ancestors. These results support a hypothesis of rapid evolution of a purely resident life history in the above-barrier population in response to strong selection against downstream movement.

  18. Gene expression and pathologic alterations in juvenile rainbow trout due to chronic dietary TCDD exposure

    Energy Technology Data Exchange (ETDEWEB)

    Liu, Qing [Department of Biological Sciences, University of Wisconsin-Milwaukee, Lapham Hall, 3209 N. Maryland Ave., Milwaukee, WI 53211 (United States); School of Freshwater Sciences, University of Wisconsin-Milwaukee, 600 E Greenfield Ave, Milwaukee, WI 53204 (United States); Rise, Matthew L. [Ocean Sciences Centre, Memorial University of Newfoundland, 1 Marine Lab Road, St. John' s, NL, A1C 5S7 (Canada); Spitsbergen, Jan M. [Department of Microbiology, Oregon State University, 220 Nash Hall, Corvallis, OR 97331 (United States); Hori, Tiago S. [Ocean Sciences Centre, Memorial University of Newfoundland, 1 Marine Lab Road, St. John' s, NL, A1C 5S7 (Canada); Mieritz, Mark; Geis, Steven [Wisconsin State Laboratory of Hygiene, 465 Henry Mall, Madison, WI 53706 (United States); McGraw, Joseph E. [School of Pharmacy, Concordia University Wisconsin, 12800 North Lake Shore Drive, Mequon, WI 53097 (United States); Goetz, Giles [School of Aquatic and Fishery Sciences, University of Washington, 1122 Northeast Boat Street, Seattle, WA 98195 (United States); Larson, Jeremy; Hutz, Reinhold J. [Department of Biological Sciences, University of Wisconsin-Milwaukee, Lapham Hall, 3209 N. Maryland Ave., Milwaukee, WI 53211 (United States); Carvan, Michael J., E-mail: carvanmj@uwm.edu [Department of Biological Sciences, University of Wisconsin-Milwaukee, Lapham Hall, 3209 N. Maryland Ave., Milwaukee, WI 53211 (United States); School of Freshwater Sciences, University of Wisconsin-Milwaukee, 600 E Greenfield Ave, Milwaukee, WI 53204 (United States)

    2013-09-15

    -regulated gene among each group based on microarray data, and their QPCR validations are consistent with microarray data for the 10 and 100 ppb TCDD treatment groups after 28 days exposure (p < 0.05). In addition, in the 100 ppb group at 28 days, expression of complement component C3-1 and trypsin-1 precursor have a more than 10-fold induction from the microarray experiments, and their QPCR validations are consistent and showed significant induction in the 100 ppb group at 28 days (p < 0.05). Overall, lesion in nasal epithelium is a novel and significant result in this study, and TCDD-responsive rainbow trout transcripts identified in the present study may lead to the development of new molecular biomarkers for assessing the potential impacts of environmental TCDD on rainbow trout populations.

  19. The effect of Cu2+ on osmoregulation in rainbow trout (Oncorhynchus mykiss) assayed by changes in plasma salinity and gill lipid metabolism

    DEFF Research Database (Denmark)

    Hansen, Heinz J.M.; Olsen, Allan Gylling; Rosenkilde, Per

    1993-01-01

    Zoofysiologi, Osmoregulation, Lipid metabolism, Ecotoxicology, Rainbow trout, Oncorhynchus mykiss.......Zoofysiologi, Osmoregulation, Lipid metabolism, Ecotoxicology, Rainbow trout, Oncorhynchus mykiss....

  20. Linking water age and solute dynamics in streamflow at the Hubbard Brook Experimental Forest, NH, USA

    Science.gov (United States)

    Paolo Benettin; Scott W. Bailey; John L. Campbell; Mark B. Green; Andrea Rinaldo; Gene E. Likens; Kevin J. McGuire; Gianluca Botter

    2015-01-01

    We combine experimental and modeling results from a headwater catchment at the Hubbard Brook Experimental Forest (HBEF), New Hampshire, USA, to explore the link between stream solute dynamics and water age. A theoretical framework based on water age dynamics, which represents a general basis for characterizing solute transport at the catchment scale, is here applied to...

  1. Chemical and morphological distinctions between vertical and lateral podzolization at Hubbard Brook

    Science.gov (United States)

    Rebecca R. Bourgault; Donald S. Ross; Scott W. Bailey

    2015-01-01

    Classical podzolization studies assumed vertical percolation and pedon-scale horizon development. However, hillslope-scale lateral podzolization also occurs where lateral subsurface water flux predominates. In this hydropedologic study, 99 podzols were observed in Watershed 3, Hubbard Brook Experimental Forest, New Hampshire. Soil horizon samples were extracted with...

  2. SOIL ALUMINUM DISTRIBUTION IN THE NEAR-STREAM ZONE AT THE BEAR BROOK WATERSHED IN MAINE

    Science.gov (United States)

    Near-stream and upslope soil chemical properties were analyzed to infer linkages between soil and surface water chemistry at the Bear Brook Watershed in Maine [BBWM]. Organic and mineral soil samples were collected along six 20 m transects perpendicular to the stream and one 200 ...

  3. The Spine of Literature: A Conversation between Eudora Welty and Cleanth Brooks.

    Science.gov (United States)

    Taylor, Caroline

    1988-01-01

    Describes a discussion between Cleanth Brooks and Eudora Welty about the state of the story in today's fiction. Characterizes the narrative form as the spine of literature. Points out that, too often, contemporary writers neglect this form of writing and instead emphasize a type of prose poetry. Notes that authors today overemphasize the present…

  4. Elevation dependent sensitivity of northern hardwoods to Ca addition at Hubbard Brook Experimental Forest, NH USA

    Science.gov (United States)

    Rakesh Minocha; Stephanie Long; Palaniswamy Thangavel; Subhash C. Minocha; Christopher Eagar; Charles T. Driscoll

    2010-01-01

    Acidic deposition has caused a depletion of calcium (Ca) in the northeastern forest soils. Wollastonite (Ca silicate) was added to watershed 1 (WS1) at the Hubbard Brook Experimental Forest (HBEF) in 1999 to evaluate its effects on various functions of the HBEF ecosystem. The effects of Ca addition on foliar soluble (extractable in 5% HClO4) ions...

  5. The Spine of Literature: A Conversation between Eudora Welty and Cleanth Brooks.

    Science.gov (United States)

    Taylor, Caroline

    1988-01-01

    Describes a discussion between Cleanth Brooks and Eudora Welty about the state of the story in today's fiction. Characterizes the narrative form as the spine of literature. Points out that, too often, contemporary writers neglect this form of writing and instead emphasize a type of prose poetry. Notes that authors today overemphasize the present…

  6. On the identity of Cervus nigricans Brooke, 1877, with remarks upon other deer from the Philippines

    NARCIS (Netherlands)

    Dobroruka, L.J.

    1971-01-01

    A great number of papers deal with the deer of the Philippine Islands but in spite of this fact the taxonomy and the nomenclature are still not clear. The first author who recapitulated all known facts about the Philippine deer was Brooke (1877), who also described a new species, Cervus nigricans.

  7. IMPACTS OF MARINE AEROSOLS ON SURFACE WATER CHEMISTRY AT BEAR BROOK WATERSHED, MAINE USA

    Science.gov (United States)

    The East Bear catchment at Bear Brook Watershed, Maine receives moderate (for the eastern U.S.) amounts of Cl- in wet and dry deposition. In 1989, Cl- in precipitation ranged from 2 to 55 eq/L. Dry, occult, and wet deposition plus evapotranspiration resulted in stream Cl- averagi...

  8. Long-term trends from ecosystem research at the Hubbard Brook Experimental Forest

    Science.gov (United States)

    John L. Campbell; Charles T. Driscoll; Christopher Eagar; Gene E. Likens; Thomas G. Siccama; Chris E. Johnson; Timothy J. Fahey; Steven P. Hamburg; Richard T. Holmes; Amey S. Bailey; Donald C. Buso

    2007-01-01

    Summarizes 52 years of collaborative, long-term research conducted at the Hubbard Brook (NH) Experimental Forest on ecosystem response to disturbances such as air pollution, climate change, forest disturbance, and forest management practices. Also provides explanations of some of the trends and lists references from scientific literature for further reading.

  9. The past as prelude to the future for understanding 21st-century climate effects on Rocky Mountain Trout

    Science.gov (United States)

    Isaak, Daniel J.; Muhlfeld, Clint C.; Todd, Andrew S.; Al-chokhachy, Robert; Roberts, James; Kershner, Jeffrey L.; Fausch, Kurt D.; Hostetler, Steven W.

    2012-01-01

    Bioclimatic models predict large reductions in native trout across the Rocky Mountains in the 21st century but lack details about how changes will occur. Through five case histories across the region, we explore how a changing climate has been affecting streams and the potential consequences for trout. Monitoring records show trends in temperature and hydrographs consistent with a warming climate in recent decades. Biological implications include upstream shifts in thermal habitats, risk of egg scour, increased wildfire disturbances, and declining summer habitat volumes. The importance of these factors depends on the context, but temperature increases are most relevant where population boundaries are mediated by thermal constraints. Summer flow declines and wildfires will be important where trout populations are fragmented and constrained to small refugia. A critical information gap is evidence documenting how populations are adjusting to long-term habitat trends, so biological monitoring is a priority. Biological, temperature, and discharge data from monitoring networks could be used to develop accurate vulnerability assessments that provide information regarding where conservation actions would best improve population resilience. Even with better information, future uncertainties will remain large due to unknowns regarding Earth's ultimate warming trajectory and how effects translate across scales. Maintaining or increasing the size of habitats could provide a buffer against these uncertainties.

  10. A Dense Brown Trout (Salmo trutta) Linkage Map Reveals Recent Chromosomal Rearrangements in the Salmo Genus and the Impact of Selection on Linked Neutral Diversity

    Science.gov (United States)

    Leitwein, Maeva; Guinand, Bruno; Pouzadoux, Juliette; Desmarais, Erick; Berrebi, Patrick; Gagnaire, Pierre-Alexandre

    2017-01-01

    High-density linkage maps are valuable tools for conservation and eco-evolutionary issues. In salmonids, a complex rediploidization process consecutive to an ancient whole genome duplication event makes linkage maps of prime importance for investigating the evolutionary history of chromosome rearrangements. Here, we developed a high-density consensus linkage map for the brown trout (Salmo trutta), a socioeconomically important species heavily impacted by human activities. A total of 3977 ddRAD markers were mapped and ordered in 40 linkage groups using sex- and lineage-averaged recombination distances obtained from two family crosses. Performing map comparison between S. trutta and its sister species, S. salar, revealed extensive chromosomal rearrangements. Strikingly, all of the fusion and fission events that occurred after the S. salar/S. trutta speciation happened in the Atlantic salmon branch, whereas the brown trout remained closer to the ancestral chromosome structure. Using the strongly conserved synteny within chromosome arms, we aligned the brown trout linkage map to the Atlantic salmon genome sequence to estimate the local recombination rate in S. trutta at 3721 loci. A significant positive correlation between recombination rate and within-population nucleotide diversity (π) was found, indicating that selection constrains variation at linked neutral sites in brown trout. This new high-density linkage map provides a useful genomic resource for future aquaculture, conservation, and eco-evolutionary studies in brown trout. PMID:28235829

  11. Protocol for determining bull trout presence

    Science.gov (United States)

    Peterson, James; Dunham, Jason B.; Howell, Philip; Thurow, Russell; Bonar, Scott

    2002-01-01

    The Western Division of the American Fisheries Society was requested to develop protocols for determining presence/absence and potential habitat suitability for bull trout. The general approach adopted is similar to the process for the marbled murrelet, whereby interim guidelines are initially used, and the protocols are subsequently refined as data are collected. Current data were considered inadequate to precisely identify suitable habitat but could be useful in stratifying sampling units for presence/absence surveys. The presence/absence protocol builds on previous approaches (Hillman and Platts 1993; Bonar et al. 1997), except it uses the variation in observed bull trout densities instead of a minimum threshold density and adjusts for measured differences in sampling efficiency due to gear types and habitat characteristics. The protocol consists of: 1. recommended sample sizes with 80% and 95% detection probabilities for juvenile and resident adult bull trout for day and night snorkeling and electrofishing adjusted for varying habitat characteristics for 50m and 100m sampling units, 2. sampling design considerations, including possible habitat characteristics for stratification, 3. habitat variables to be measured in the sampling units, and 3. guidelines for training sampling crews. Criteria for habitat strata consist of coarse, watershed-scale characteristics (e.g., mean annual air temperature) and fine-scale, reach and habitat-specific features (e.g., water temperature, channel width). The protocols will be revised in the future using data from ongoing presence/absence surveys, additional research on sampling efficiencies, and development of models of habitat/species occurrence.

  12. Fish populations in Plynlimon streams

    Directory of Open Access Journals (Sweden)

    D. T. Crisp

    1997-01-01

    Full Text Available In Plynlimon streams, brown trout (Salmo trutta L. are widespread in the upper Wye at population densities of 0.03 to 0.32 fish m-2 and show evidence of successful recruitment in most years. In the upper Severn, brown trout are found only in an area of c. 1670 -2 downstream of Blaenhafren Falls at densities of 0.03 to 0.24 fish -2 and the evidence suggests very variable year to year success in recruitment (Crisp & Beaumont, 1996. Analyses of the data show that temperature differences between afforested and unafforested streams may affect the rates of trout incubation and growth but are not likely to influence species survival. Simple analyses of stream discharge data suggest, but do not prove, that good years for recruitment in the Hafren population were years of low stream discharge. This may be linked to groundwater inputs detected in other studies in this stream. More research is needed to explain the survival of the apparently isolated trout population in the Hafren.

  13. Taxonomy Icon Data: rainbow trout [Taxonomy Icon

    Lifescience Database Archive (English)

    Full Text Available rainbow trout Oncorhynchus mykiss Chordata/Vertebrata/Pisciformes Oncorhynchus_mykiss_L.png Oncorhynchus_my...kiss_NL.png Oncorhynchus_mykiss_S.png Oncorhynchus_mykiss_NS.png http://biosciencedbc.jp/taxonomy..._icon/icon.cgi?i=Oncorhynchus+mykiss&t=L http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Oncorhynchus+my...kiss&t=NL http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Oncorhynchus+my...kiss&t=S http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Oncorhynchus+mykiss&t=NS ...

  14. The chemical disinfection of trout ponds

    Science.gov (United States)

    Fish, F.F.

    1933-01-01

    The need for knowledge concerning the prevention and control of fish diseases has never been greater than it is in this present era of economy when two fish must be raised in the same water which once supported but one. Fish pathologists have contributed a great deal to our knowledge of fish diseases, but there is still much to be learned, particularly concerning better methods of preventing and eliminating diseases among our trout. In this era of circular pools and raceways, our disease elimination is way back in the early days of standard troughs.

  15. South Fork Flathead Watershed Westslope Cutthroat Trout Conservation Program, Annual Report 2002.

    Energy Technology Data Exchange (ETDEWEB)

    Grisak, Grant; Marotz, Brian

    2003-06-01

    In 1999, Montana Fish, Wildlife & Parks (MFWP) began a program aimed at conserving the genetically pure populations of westslope cutthroat trout in the South Fork Flathead River drainage. The objective of this program is to eliminate all of the exotic and hybrid trout that threaten the genetically pure westslope cutthroat populations in the South Fork Flathead. The exotic and hybrid trout populations occur in several headwater lakes and their outflow streams. In 2001 MFWP released a draft environmental assessment, pursuant to the Montana Environmental Policy Act (MEPA), that addressed the use of motorized equipment to deliver personnel and materials to some of these lakes in the Bob Marshall and Great Bear Wildernesses (Grisak 2001). After a 30-day public comment period, MFWP determined that the complexity of issues was too great and warranted a more detailed analysis. These issues included transportation options for personnel, equipment and materials, the use of motorized equipment in wilderness, fish removal methods, fish stocking, and the status and distribution of amphibian populations in the project area. Because the program also involves the U.S. Forest Service (USFS) and Bonneville Power Administration (BPA), the environmental analysis needs to comply with the National Environmental Policy Act (NEPA). In October 2001, pursuant to NEPA, MFWP, along with the USFS and BPA initiated an environmental assessment to address these issues. In June 2002, the three agencies determined that the scope of these issues warranted an Environmental Impact Statement. This specialist report describes the logistical, technical and biological issues associated with this project and provides an analysis of options for fish removal, transportation and fish stocking. It further analyzes issues and concerns associated with amphibian populations and creating new domesticated stocks of westslope cutthroat trout. Finally, this document provides a description of each lake, the best

  16. TOPMODEL simulations of streamflow and depth to water table in Fishing Brook Watershed, New York, 2007-09

    Science.gov (United States)

    Nystrom, Elizabeth A.; Burns, Douglas A.

    2011-01-01

    TOPMODEL, a physically based, variable-source area rainfall-runoff model, was used to simulate streamflow and depth to water table for the period January 2007-September 2009 in the 65.6 square kilometers of Fishing Brook Watershed in northern New York. The Fishing Brook Watershed is located in the headwaters of the Hudson River and is predominantly forested with a humid, cool continental climate. The motivation for applying this model at Fishing Brook was to provide a simulation that would be effective later at this site in modeling the interaction of hydrologic processes with mercury dynamics.

  17. Patterns of δ13 C and δ15 N in wolverine Gulo gulo tissues from the Brooks Range, Alaska

    Institute of Scientific and Technical Information of China (English)

    Fredrik DALERUM; Anders ANGERBJ(O)RN; Kyran KUNKEL; Brad S.SHULTS

    2009-01-01

    Knowledge of carnivore diets is essential to understand hew carnivore populations respond demographically to variations in prey abundance. Analysis of stable isotopes is a useful complement to traditional methods of analyzing carnivore diets. We used data on δ13 C and δ15 N in wolverine tissues to investigate patterns of seasonal and annual diet variation in a wolverine Gulo gulo population in the western Brooks Range, Alaska, USA. The stable isotope ratios in wolverine tissues generally reflected that of terrestrial carnivores, corroborating previous diet studies on wolverines. We also found variation in δ13 C and δ15 N both between muscle samples collected over several years and between tissues with different assimilation rates, even after correcting for isotopic fractionation. This suggests both annual and seasonal diet variation. Our results indicate that data on δ13 C and δ15 N holds promise for qualitative assessments of wolverine diet changes over time. Such temporal variation may be important indicators of ecological responses to environmental perturbations, and we suggest that more refined studies of stable isotopes may be an important tool when studying temporal change in diets of wolverines and similar carnivores.

  18. Wild trout responses to a stress experience following confinement conditions during the spawning season

    Directory of Open Access Journals (Sweden)

    Gilberto Forneris

    2010-01-01

    Full Text Available Salmo (trutta marmoratus is an endemic specie in the North of Italy, subjected to hybridization with domesticated strains of trout. Native populations are managed by supportive release in the rivers. Wild breeders are captured, confined in facility for short periods and then released in the river after artificial fertilization. Premature mortality during confinement and post release mortality in river have been observed in breeders supporting the view that confinement stress could be the cause. Twenty-six adult individuals of trout were captured from a river by electrofishing and stocked in two tanks, the first one (RF provided with artificial refuges to simulate the natural environment and covered by dark panels; the second tank (TR was only partially covered by dark panels and without artificial refuges. All the other conditions were identical and animals were fed ad libitum with natural food collected in the same river. After 50 days, from a third group of 8 trout (WD captured in the same river by a 5 minute electrofishing session, blood samples were sequentially collected for the assessment of serum cortisol response to serial repeated handlings. With the same sequential method, individuals of the RF and TR experimental groups were sampled. Cortisol levels were compared between groups by ANOVA. Biomass densities decreased during the experiment due to premature mortality of the largest individuals in both the RF (7.69% and TR (30.77% groups. At the end of the experiment, data clearly demonstrated that after a stressing confinement, the TR group shown a reduced poststress response to the successive serial handlings. Vice versa the group RF, that experienced a more careful confinement, responded to the second serial acute stressing manipulation in conformity as the group WD that was not confined. Cortisol data support the hypothesis of impaired cortisol response as a consequence of oversecretion due to uneasiness during the short

  19. Grizzly bear predation links the loss of native trout to the demography of migratory elk in Yellowstone

    Science.gov (United States)

    Middleton, Arthur D.; Morrison, Thomas A.; Fortin, Jennifer K.; Robbins, Charles T.; Proffitt, Kelly M.; White, P.J.; McWhirter, Douglas E.; Koel, Todd M.; Brimeyer, Douglas G.; Fairbanks, W. Sue; Kauffman, Matthew J.

    2013-01-01

    The loss of aquatic subsidies such as spawning salmonids is known to threaten a number of terrestrial predators, but the effects on alternative prey species are poorly understood. At the heart of the Greater Yellowstone ecosystem, an invasion of lake trout has driven a dramatic decline of native cutthroat trout that migrate up the shallow tributaries of Yellowstone Lake to spawn each spring. We explore whether this decline has amplified the effect of a generalist consumer, the grizzly bear, on populations of migratory elk that summer inside Yellowstone National Park (YNP). Recent studies of bear diets and elk populations indicate that the decline in cutthroat trout has contributed to increased predation by grizzly bears on the calves of migratory elk. Additionally, a demographic model that incorporates the increase in predation suggests that the magnitude of this diet shift has been sufficient to reduce elk calf recruitment (4–16%) and population growth (2–11%). The disruption of this aquatic–terrestrial linkage could permanently alter native species interactions in YNP. Although many recent ecological changes in YNP have been attributed to the recovery of large carnivores—particularly wolves—our work highlights a growing role of human impacts on the foraging behaviour of grizzly bears.

  20. Grizzly bear predation links the loss of native trout to the demography of migratory elk in Yellowstone.

    Science.gov (United States)

    Middleton, Arthur D; Morrison, Thomas A; Fortin, Jennifer K; Robbins, Charles T; Proffitt, Kelly M; White, P J; McWhirter, Douglas E; Koel, Todd M; Brimeyer, Douglas G; Fairbanks, W Sue; Kauffman, Matthew J

    2013-07-07

    The loss of aquatic subsidies such as spawning salmonids is known to threaten a number of terrestrial predators, but the effects on alternative prey species are poorly understood. At the heart of the Greater Yellowstone ecosystem, an invasion of lake trout has driven a dramatic decline of native cutthroat trout that migrate up the shallow tributaries of Yellowstone Lake to spawn each spring. We explore whether this decline has amplified the effect of a generalist consumer, the grizzly bear, on populations of migratory elk that summer inside Yellowstone National Park (YNP). Recent studies of bear diets and elk populations indicate that the decline in cutthroat trout has contributed to increased predation by grizzly bears on the calves of migratory elk. Additionally, a demographic model that incorporates the increase in predation suggests that the magnitude of this diet shift has been sufficient to reduce elk calf recruitment (4-16%) and population growth (2-11%). The disruption of this aquatic-terrestrial linkage could permanently alter native species interactions in YNP. Although many recent ecological changes in YNP have been attributed to the recovery of large carnivores--particularly wolves--our work highlights a growing role of human impacts on the foraging behaviour of grizzly bears.

  1. Parasitofauna study of the brown trout, Salmo trutta (Pisces, Teleostei from Corsica (Mediterranean island rivers

    Directory of Open Access Journals (Sweden)

    Quilichini Y.

    2007-09-01

    Full Text Available Corsica is a mediterranean island characterised by a great number of rivers. Salmonides are the main fishes which populate these rivers. Very appreciated by fishermen, Salmonides are represented by three species in the insular hydrographical network, among which an autochthonous species, the brown trout (Salmo trutta. In the present work, we have analysed the parasitofauna of this species. According to our knowledge, this research has never been carried out in Corsica. In a first step, we drew up an inventory of the parasites found in this freshwater fish. In a second step, we studied the differences which appeared in the composition of parasite communities of this species.

  2. Redband Trout Distribution, Pacific Northwest (updated March, 2006)

    Data.gov (United States)

    Pacific States Marine Fisheries Commission — This dataset is a record of fish distribution and activity for REDBAND TROUT contained in the StreamNet database. This feature class was created based on linear...

  3. Bull Trout Distribution, Pacific Northwest (updated March, 2006)

    Data.gov (United States)

    Pacific States Marine Fisheries Commission — This dataset is a record of fish distribution and activity for BULL TROUT contained in the StreamNet database. This feature class was created based on linear event...

  4. Challenge models for RTFS in rainbow trout fry (Oncorhynchus mykiss)

    DEFF Research Database (Denmark)

    Henriksen, Maya Maria Mihályi; Madsen, Lone; Dalsgaard, Inger

    2011-01-01

    forms of stress have shown to be reproducible. Bath challenge is more appropriate for vaccine testing, since natural transmission of infection is imitated and is also more suitable due to the small size of the fry. A bath-model using H2O2 as a stressor is currently being tested on 1.4g rainbow trout fry......The fish pathogen Flavobacterium psychrophilum is one of the main causes of mortality in fry of farmed rainbow trout (Oncorhynchus mykiss) and other salmonid fish. The disease following infection is often called bacterial coldwater disease (BCWD) in USA and rainbow trout fry syndrome (RTFS...... of infection. The overall goal is also to examine gene expression and location of transcription products in rainbow trout fry, in order to optimize vaccination or immune-stimulation. The presentation will focus on previous experimental models and the experimental design of the current model as well...

  5. Westslope Cutthroat Trout Distribution, Pacific Northwest (updated March, 2006)

    Data.gov (United States)

    Pacific States Marine Fisheries Commission — This dataset is a record of fish distribution and activity for WESTSLOPE CUTTHROAT TROUT contained in the StreamNet database. This feature class was created based on...

  6. Yellowstone Cutthroat Trout Distribution, Pacific Northwest (updated March, 2006)

    Data.gov (United States)

    Pacific States Marine Fisheries Commission — This dataset is a record of fish distribution and activity for YELLOWSTONE CUTTHROAT TROUT contained in the StreamNet database. This feature class was created based...

  7. Lahontan Cutthroat Trout Distribution, Pacific Northwest (updated March, 2006)

    Data.gov (United States)

    Pacific States Marine Fisheries Commission — This dataset is a record of fish distribution and activity for LAHONTAN CUTTHROAT TROUT contained in the StreamNet database. This feature class was created based on...

  8. Rainbow Trout Distribution, Pacific Northwest (updated March, 2006)

    Data.gov (United States)

    Pacific States Marine Fisheries Commission — This dataset is a record of fish distribution and activity for RAINBOW TROUT contained in the StreamNet database. This feature class was created based on linear...

  9. Brown Trout Distribution, Pacific Northwest (updated March, 2006)

    Data.gov (United States)

    Pacific States Marine Fisheries Commission — This dataset is a record of fish distribution and activity for BROWN TROUT contained in the StreamNet database. This feature class was created based on linear event...

  10. CRED 20 m Gridded bathymetry of Brooks Banks and St.Rogatien Bank, Hawaii, USA (NetCDF format)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Gridded bathymetry (20m) of the shelf and slope environments of Brooks Banks and St. Rogatien, Hawaii, USA. The netCDF grid includes multibeam bathymetry from the...

  11. 2006 Reson 8101ER Multibeam Sonar Data from Cruise AHI-06-12 - Brooks Bank, Northwestern Hawaiian Islands

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Reson 8101ER multibeam Data were collected between 13-15 October 2006 aboard NOAA Survey Launch Acoustic Habitat Investigator (AHI) Brooks Banks in the Northwestern...

  12. CRED 20 m Gridded bathymetry of Brooks Banks and St. Rogatien Bank, Hawaii, USA (Arc ASCII format)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Gridded bathymetry (20m) of the shelf and slope environments of Brooks Banks and St. Rogatien, Hawaii, USA. The ASCII includes multibeam bathymetry from the Simrad...

  13. A Comparison of Some Aspects of Two Extinct Mammals, Mammuthus Brookes, 1828 (Proboscidea: Elephantidae) and Mammut Blumenbach, 1799 (Proboscidea: Mammutidae)

    National Research Council Canada - National Science Library

    Pankaj S. Bhatnagar

    2013-01-01

    The present study aims at extracting the fossil database www.paleodb.org to compare extinct megafauna genera, Mammuthus Brookes, 1828 and Mammut Blumenbach, 1799 along with its close reletive, Zygolophodon (Vacek, 1877...

  14. SuchThatCast Episode 3: J.D. Trout

    OpenAIRE

    Søraker, J.H.

    2012-01-01

    SuchThatCast goes mobile in the third episode, as I interview J.D. Trout on the appr. 2 hour train ride between Enschede and Schiphol airport. Trout received his PhD in Philosophy at Cornell University and is currently Professor of Philosophy and Psychology at Loyola University Chicago. He was recently awarded the prestigious Phi Beta Kappa Romanell Professorship for 2012-13. His chief interests include the nature of scientific explanation, the psychology of human judgment, scientific realism...

  15. Delineation of sympatric morphotypes of lake trout in Lake Superior

    Science.gov (United States)

    Moore, Seth A.; Bronte, Charles R.

    2001-01-01

    Three morphotypes of lake trout Salvelinus namaycush are recognized in Lake Superior: lean, siscowet, and humper. Absolute morphotype assignment can be difficult. We used a size-free, whole-body morphometric analysis (truss protocol) to determine whether differences in body shape existed among lake trout morphotypes. Our results showed discrimination where traditional morphometric characters and meristic measurements failed to detect differences. Principal components analysis revealed some separation of all three morphotypes based on head and caudal peduncle shape, but it also indicated considerable overlap in score values. Humper lake trout have smaller caudal peduncle widths to head length and depth characters than do lean or siscowet lake trout. Lean lake trout had larger head measures to caudal widths, whereas siscowet had higher caudal peduncle to head measures. Backward stepwise discriminant function analysis retained two head measures, three midbody measures, and four caudal peduncle measures; correct classification rates when using these variables were 83% for leans, 80% for siscowets, and 83% for humpers, which suggests the measures we used for initial classification were consistent. Although clear ecological reasons for these differences are not readily apparent, patterns in misclassification rates may be consistent with evolutionary hypotheses for lake trout within the Laurentian Great Lakes.

  16. Conservation of native Pacific trout diversity in western North America

    Science.gov (United States)

    Penaluna, Brooke E.; Abadía-Cardoso, Alicia; Dunham, Jason; García de León, Francisco J; Gresswell, Robert E.; Luna, Arturo Ruiz; Taylor, Eric B.; Shepard, Bradley B.; Al-Chokhachy, Robert K.; Muhlfeld, Clint C.; Bestgen, Kevin R.; Rogers, Kevin H.; Escalante, Marco A; Keeley, Ernest R; Temple, Gabriel; Williams, Jack E.; Matthews, Kathleen; Pierce, Ron; Mayden, Richard L.; Kovach, Ryan; Garza, John Carlos; Fausch, Kurt D.

    2016-01-01

    Pacific trout Oncorhynchus spp. in western North America are strongly valued in ecological, socioeconomic, and cultural views, and have been the subject of substantial research and conservation efforts. Despite this, the understanding of their evolutionary histories, overall diversity, and challenges to their conservation is incomplete. We review the state of knowledge on these important issues, focusing on Pacific trout in the genus Oncorhynchus. Although most research on salmonid fishes emphasizes Pacific salmon, we focus on Pacific trout because they share a common evolutionary history, and many taxa in western North America have not been formally described, particularly in the southern extent of their ranges. Research in recent decades has led to the revision of many hypotheses concerning the origin and diversification of Pacific trout throughout their range. Although there has been significant success at addressing past threats to Pacific trout, contemporary and future threats represented by nonnative species, land and water use activities, and climate change pose challenges and uncertainties. Ultimately, conservation of Pacific trout depends on how well these issues are understood and addressed, and on solutions that allow these species to coexist with a growing scope of human influences.

  17. Kalispel Resident Fish Project : Annual Report, 1995.

    Energy Technology Data Exchange (ETDEWEB)

    Maroney, Joseph; Donley, Christopher; Scott, Jason; Lockwood, Jr., Neil

    1997-06-01

    In 1995 the Kalispel Natural Resource Department (KNRD) in conjunction with the Washington Department of Fish and Wildlife (WDFW) initiated the implementation of a habitat and population enhancement project for bull trout (Salvelinus confluentus), westslope cutthroat trout (Oncorhynchus clarki lewisi) and largemouth bass (Micropterus salmoides). Habitat and population assessments were conducted in seven tributaries of the Box Canyon reach of the Pend Oreille River. Assessments were used to determine the types and quality of habitat that were limiting to native bull trout and cutthroat trout populations. Assessments were also used to determine the effects of interspecific competition within these streams. A bull trout and brook trout (Salvelinus fontinalis) hybridization assessment was conducted to determine the degree of hybridization between these two species. Analysis of the habitat data indicated high rates of sediment and lack of wintering habitat. The factors that contribute to these conditions have the greatest impact on habitat quality for the tributaries of concern. Population data suggested that brook trout have less stringent habitat requirements; therefore, they have the potential to outcompete the native salmonids in areas of lower quality habitat. No hybrids were found among the samples, which is most likely attributable to the limited number of bull trout. Data collected from these assessments were compiled to develop recommendations for enhancement measures. Recommendations for restoration include riparian planting and fencing, instream structures, as well as, removal of non-native brook trout to reduce interspecific competition with native salmonids in an isolated reach of Cee Cee Ah Creek.

  18. Effects of fluctuating flows and a controlled flood on incubation success and early survival rates and growth of age-0 rainbow trout in a large regulated river

    Science.gov (United States)

    Korman, Josh; Kaplinski, Matthew; Melis, Theodore S.

    2011-01-01

    Hourly fluctuations in flow from Glen Canyon Dam were increased in an attempt to limit the population of nonnative rainbow trout Oncorhynchus mykiss in the Colorado River, Arizona, due to concerns about negative effects of nonnative trout on endangered native fishes. Controlled floods have also been conducted to enhance native fish habitat. We estimated that rainbow trout incubation mortality rates resulting from greater fluctuations in flow were 23-49% (2003 and 2004) compared with 5-11% under normal flow fluctuations (2006-2010). Effects of this mortality were apparent in redd excavations but were not seen in hatch date distributions or in the abundance of the age-0 population. Multiple lines of evidence indicated that a controlled flood in March 2008, which was intended to enhance native fish habitat, resulted in a large increase in early survival rates of age-0 rainbow trout. Age-0 abundance in July 2008 was over fourfold higher than expected given the number of viable eggs that produced these fish. A hatch date analysis indicated that early survival rates were much higher for cohorts that hatched about 1 month after the controlled flood (~April 15) relative to those that hatched before this date. The cohorts that were fertilized after the flood were not exposed to high flows and emerged into better-quality habitat with elevated food availability. Interannual differences in age-0 rainbow trout growth based on otolith microstructure supported this hypothesis. It is likely that strong compensation in survival rates shortly after emergence mitigated the impact of incubation losses caused by increases in flow fluctuations. Control of nonnative fish populations will be most effective when additional mortality is applied to older life stages after the majority of density-dependent mortality has occurred. Our study highlights the need to rigorously assess instream flow decisions through the evaluation of population-level responses.

  19. Exploring the potential of life-history key innovation: brook breeding in the radiation of the Malagasy treefrog genus Boophis.

    Science.gov (United States)

    Vences, M; Andreone, F; Glaw, F; Kosuch, J; Meyer, A; Schaefer, H-C; Veith, M

    2002-08-01

    The treefrog genus Boophis is one of the most species-rich endemic amphibian groups of Madagascar. It consists of species specialized to breeding in brooks (48 species) and ponds (10 species). We reconstructed the phylogeny of Boophis using 16S ribosomal DNA sequences (558 bp) from 27 species. Brook-breeders were monophyletic and probably derived from an ancestral pond-breeding lineage. Pond-breeders were paraphyletic. The disparity in diversification among pond-breeders and brook-breeders was notable among endemic Malagasy frogs, although it was not significant when considering Boophis alone. Sibling species which have different advertisement calls but are virtually indistinguishable by morphology were common among brook-breeders; genetic divergence between these species was high (modal 8% total pairwise divergence). Substitution rates in brook-breeding species were significantly higher than in pond-breeders. Speciation of pond-breeders may be hindered by their usually more synchronous reproduction and a higher vagility which enhances gene flow, while a higher potential of spatial segregation and speciation may exist along brooks.

  20. MicroTrout: A comprehensive, genome-wide miRNA target prediction framework for rainbow trout, Oncorhynchus mykiss.

    Science.gov (United States)

    Mennigen, Jan A; Zhang, Dapeng

    2016-12-01

    Rainbow trout represent an important teleost research model and aquaculture species. As such, rainbow trout are employed in diverse areas of biological research, including basic biological disciplines such as comparative physiology, toxicology, and, since rainbow trout have undergone both teleost- and salmonid-specific rounds of genome duplication, molecular evolution. In recent years, microRNAs (miRNAs, small non-protein coding RNAs) have emerged as important posttranscriptional regulators of gene expression in animals. Given the increasingly recognized importance of miRNAs as an additional layer in the regulation of gene expression and hence biological function, recent efforts using RNA- and genome sequencing approaches have resulted in the creation of several resources for the construction of a comprehensive repertoire of rainbow trout miRNAs and isomiRs (variant miRNA sequences that all appear to derive from the same gene but vary in sequence due to post-transcriptional processing). Importantly, through the recent publication of the rainbow trout genome (Berthelot et al., 2014), mRNA 3'UTR information has become available, allowing for the first time the genome-wide prediction of miRNA-target RNA relationships in this species. We here report the creation of the microtrout database, a comprehensive resource for rainbow trout miRNA and annotated 3'UTRs. The comprehensive database was used to implement an algorithm to predict genome-wide rainbow trout-specific miRNA-mRNA target relationships, generating an improved predictive framework over previously published approaches. This work will serve as a useful framework and sequence resource to experimentally address the role of miRNAs in several research areas using the rainbow trout model, examples of which are discussed. Copyright © 2016 Elsevier Inc. All rights reserved.

  1. Early Marine Migration Patterns of Wild Coastal Cutthroat Trout (Oncorhynchus clarki clarki), Steelhead Trout (Oncorhynchus mykiss), and Their Hybrids

    OpenAIRE

    2010-01-01

    BACKGROUND: Hybridization between coastal cutthroat trout (Oncorhynchus clarki clarki) and steelhead or rainbow trout (Oncorhynchus mykiss) has been documented in several streams along the North American west coast. The two species occupy similar freshwater habitats but the anadromous forms differ greatly in the duration of marine residence and migration patterns at sea. Intermediate morphological, physiological, and performance traits have been reported for hybrids but little information has...

  2. Five-year evaluation of habitat remediation in Thunder Bay, Lake Huron: Comparison of constructed reef characteristics that attract spawning lake trout

    Science.gov (United States)

    Marsden, J. Ellen; Binder, Thomas R.; Johnson, James; He, Ji; Dingledine, Natalie; Adams, Janice; Johnson, Nicholas S.; Buchinger, Tyler J.; Krueger, Charles C.

    2016-01-01

    Degradation of aquatic habitats has motivated construction and research on the use of artificial reefs to enhance production of fish populations. However, reefs are often poorly planned, reef design characteristics are not evaluated, and reef assessments are short-term. We constructed 29 reefs in Thunder Bay, Lake Huron, in 2010 and 2011 to mitigate for degradation of a putative lake trout spawning reef. Reefs were designed to evaluate lake trout preferences for height, orientation, and size, and were compared with two degraded natural reefs and a high-quality natural reef (East Reef). Eggs and fry were sampled on each reef for five years post-construction, and movements of 40 tagged lake trout were tracked during three spawning seasons using acoustic telemetry. Numbers of adults and spawning on the constructed reefs were initially low, but increased significantly over the five years, while remaining consistent on East Reef. Adult density, egg deposition, and fry catch were not related to reef height or orientation of the constructed reefs, but were related to reef size and adjacency to East Reef. Adult lake trout visited and spawned on all except the smallest constructed reefs. Of the metrics used to evaluate the reefs, acoustic telemetry produced the most valuable and consistent data, including fine-scale examination of lake trout movements relative to individual reefs. Telemetry data, supplemented with diver observations, identified several previously unknown natural spawning sites, including the high-use portions of East Reef. Reef construction has increased the capacity for fry production in Thunder Bay without apparently decreasing the use of the natural reef. Results of this project emphasize the importance of multi-year reef assessment, use of multiple assessment methods, and comparison of reef characteristics when developing artificial reef projects. Specific guidelines for construction of reefs focused on enhancing lake trout spawning are suggested.

  3. Analysis of the association between spawning time QTL markers and the biannual spawning behavior in rainbow trout (Oncorhynchus mykiss

    Directory of Open Access Journals (Sweden)

    Nelson Colihueque

    2010-01-01

    Full Text Available The rainbow trout is a salmonid fish that occasionally exhibits broodstocks with biannual spawning behavior, a phenomenon known as a double annual reproductive cycle (DARC. Spawning time quantitative trait loci (SPT-QTLs affect the time of the year that female rainbow trout spawn and may influence expression of the DARC trait. In this study, microsatellite markers linked and unlinked to SPT-QTLs were genotyped to investigate the underlying genetics of this trait. SPT-QTLs influenced the DARC trait since in two case-control comparisons three linked markers (OmyFGT12TUF, One3ASC and One19ASC had significant levels of allelic frequency differentiation and marker-character association. Furthermore, alleles of One3ASC and One19ASC had significantly higher frequencies in populations that carried the DARC trait.

  4. Market Assessment of Brooke Army Medical Center - A Strategy for Today and the Future

    Science.gov (United States)

    1985-08-01

    ticipation and representation in communitywide social or sports activi- ties are invited and strongly supported by the BAMC leadership. The purpose of...or individuals with supervisory responsibility in the outpatient setting (e.g., chief of podiatry , chief of occupational therapy, chief of physical... Sports events and activities (e.g., nutrition care run and wellness fair). c. Television and newspaper health spots. II. Increase Brooke Army

  5. EFFECT OF CULTURE CONDITIONS ON REPRODUCTIVE TRAITS OF BROWN TROUT SALMO TRUTTA L.

    Directory of Open Access Journals (Sweden)

    RANDÁK T.

    2006-07-01

    Full Text Available Progeny from artificial propagation of wild brown trout (Salmo trutta L. of the Blanice river, Czech Republic, were farmed to maturity and spawned at ages three, four and five during 2002-2004. Reproductive parameters and biological quality of eggs in this farmed population were compared to those of the original wild population. ANCOVA showed no differences between wild and farmed fish in weight of eggs per female, total fecundity, or relative fecundity in any year. Significantly higher egg diameter (4.57 mm, P = 0.001 and weight (69.3 mg, P = 0.0375 were found in the wild population in 2002 and conversely in 2004, the mean egg weight was higher in the farmed population (94.7 mg, P = 0.0021. Differences in egg diameter in this year (4.64 ± 0.06 and 4.82 ± 0.06 in wild and farmed trout, respectively were close to the level of significance (P = 0.079. Mutual correlations between length or weight and studied reproductive traits were similar in both populations. Fertilization rate, duration of incubation period, egg losses during incubation and mortality of starving hatched fry were monitored in embryos and larvae of farmed population only (FxF, crosses between farmed females and wild males (FxW and wild population only (WxW. Altogether 6.3%, 5.8% and 5.4% of eggs died during incubation period in FxF, FxW and WxW, respectively. There were also no significant differences in duration of incubation period and mortality of starving fry. It can be concluded that farming conditions did not significantly affect the reproductive parameters and quality of eggs in the first generation of farmed broodstock.

  6. Determination of benzocaine in rainbow trout plasma

    Science.gov (United States)

    Bernardy, Jeffery A.; Coleman, K.S.; Stehly, G.R.; Gingerich, William H.

    1996-01-01

    A liquid chromatographic method is described for analysis of benzocaine (BZ), a proposed fish anesthetic, in rainbow trout plasma, Mean recoveries of BZ from plasma samples fortified at 44-10 100 ng/mL were 96-100%. The method detection limit is 10 ng/mL, and the limit of quantitation is 37 ng/mL. Acetylation of BZ occurs in whole blood after storage at room temperature (i.e., 21 degrees C) for 10 min. However, no acetylation of BZ was detected in plasma samples held at room temperature for 4 h, Mean method precision for plasma samples with incurred BZ residue is similar to that for fortified samples in the same concentration range (relative standard deviations of 0.9 and 1.2%, respectively).

  7. Fragmentation and thermal risks from climate change interact to affect persistence of native trout in the Colorado River basin

    Science.gov (United States)

    Roberts, James J.; Fausch, Kurt D.; Peterson, Douglas P.; Hooten, Mevin B.

    2013-01-01

    Impending changes in climate will interact with other stressors to threaten aquatic ecosystems and their biota. Native Colorado River cutthroat trout (CRCT; Oncorhynchus clarkii pleuriticus) are now relegated to 309 isolated high-elevation (>1700 m) headwater stream fragments in the Upper Colorado River Basin, owing to past nonnative trout invasions and habitat loss. Predicted changes in climate (i.e., temperature and precipitation) and resulting changes in stochastic physical disturbances (i.e., wildfire, debris flow, and channel drying and freezing) could further threaten the remaining CRCT populations. We developed an empirical model to predict stream temperatures at the fragment scale from downscaled climate projections along with geomorphic and landscape variables. We coupled these spatially explicit predictions of stream temperature with a Bayesian Network (BN) model that integrates stochastic risks from fragmentation to project persistence of CRCT populations across the upper Colorado River basin to 2040 and 2080. Overall, none of the populations are at risk from acute mortality resulting from high temperatures during the warmest summer period. In contrast, only 37% of populations have a greater than or equal to 90% chance of persistence for 70 years (similar to the typical benchmark for conservation), primarily owing to fragmentation. Populations in short stream fragments risk of extirpation. Therefore, interactions of stochastic disturbances with fragmentation are projected to be greater threats than warming for CRCT populations. The reason for this paradox is that past nonnative trout invasions and habitat loss have restricted most CRCT populations to high-elevation stream fragments that are buffered from the potential consequences of warming, but at risk of extirpation from stochastic events. The greatest conservation need is for management to increase fragment lengths to forestall these risks. 

  8. Fragmentation and thermal risks from climate change interact to affect persistence of native trout in the Colorado River basin.

    Science.gov (United States)

    Roberts, James J; Fausch, Kurt D; Peterson, Douglas P; Hooten, Mevin B

    2013-05-01

    Impending changes in climate will interact with other stressors to threaten aquatic ecosystems and their biota. Native Colorado River cutthroat trout (CRCT; Oncorhynchus clarkii pleuriticus) are now relegated to 309 isolated high-elevation (>1700 m) headwater stream fragments in the Upper Colorado River Basin, owing to past nonnative trout invasions and habitat loss. Predicted changes in climate (i.e., temperature and precipitation) and resulting changes in stochastic physical disturbances (i.e., wildfire, debris flow, and channel drying and freezing) could further threaten the remaining CRCT populations. We developed an empirical model to predict stream temperatures at the fragment scale from downscaled climate projections along with geomorphic and landscape variables. We coupled these spatially explicit predictions of stream temperature with a Bayesian Network (BN) model that integrates stochastic risks from fragmentation to project persistence of CRCT populations across the upper Colorado River basin to 2040 and 2080. Overall, none of the populations are at risk from acute mortality resulting from high temperatures during the warmest summer period. In contrast, only 37% of populations have a ≥90% chance of persistence for 70 years (similar to the typical benchmark for conservation), primarily owing to fragmentation. Populations in short stream fragments fragmentation are projected to be greater threats than warming for CRCT populations. The reason for this paradox is that past nonnative trout invasions and habitat loss have restricted most CRCT populations to high-elevation stream fragments that are buffered from the potential consequences of warming, but at risk of extirpation from stochastic events. The greatest conservation need is for management to increase fragment lengths to forestall these risks. © 2013 Blackwell Publishing Ltd.

  9. The influence of parental effects on transcriptomic landscape during early development in brook charr (Salvelinus fontinalis, Mitchill).

    Science.gov (United States)

    Bougas, B; Audet, C; Bernatchez, L

    2013-05-01

    Parental effects represent an important source of variation in offspring phenotypes. Depending on the specific mechanisms involved, parental effects may be caused to different degrees by either the maternal or the paternal parent, and these effects may in turn act at different stages of development. To detect parental effects acting on gene transcription regulation and length phenotype during ontogeny, the transcriptomic profiles of two reciprocal hybrids from Laval × Rupert and Laval × Domestic populations of brook charr were compared at hatching, yolk sac resorption and 15 weeks after exogenous feeding. Using a salmonid cDNA microarray, our results show that parental effects modulated gene expression among reciprocal hybrids only at the yolk sac resorption stage. In addition, Laval × Domestic and Laval × Rupert reciprocal hybrids differed in the magnitude of theses parental effects, with 199 and 630 differentially expressed transcripts, respectively. This corresponds to a maximum of 18.5% of the analyzed transcripts. These transcripts are functionally related to cell cycle, nucleic acid metabolism and intracellular protein traffic, which is consistent with observed differences associated with embryonic development and growth differences in other fish species. Our results thus illustrate how parental effects on patterns of gene transcription seem dependent on the genetic architecture of the parents. In addition, in absence of transcriptional differences, non-transcript deposits in the yolk sac could contribute to the observed length differences among the reciprocal hybrids before yolk sac resorption.

  10. Intracellular diffusion restrictions in isolated cardiomyocytes from rainbow trout

    Directory of Open Access Journals (Sweden)

    Birkedal Rikke

    2009-12-01

    Full Text Available Abstract Background Restriction of intracellular diffusion of adenine nucleotides has been studied intensively on adult rat cardiomyocytes. However, their cause and role in vivo is still uncertain. Intracellular membrane structures have been suggested to play a role. We therefore chose to study cardiomyocytes from rainbow trout (Oncorhynchus mykiss, which are thinner and have fewer intracellular membrane structures than adult rat cardiomyocytes. Previous studies suggest that trout permeabilized cardiac fibers also have diffusion restrictions. However, results from fibers may be affected by incomplete separation of the cells. This is avoided when studying permeabilized, isolated cardiomyocytes. The aim of this study was to verify the existence of diffusion restrictions in trout cardiomyocytes by comparing ADP-kinetics of mitochondrial respiration in permeabilized fibers, permeabilized cardiomyocytes and isolated mitochondria from rainbow trout heart. Experiments were performed at 10, 15 and 20°C in the absence and presence of creatine. Results Trout cardiomyocytes hypercontracted in the solutions used for mammalian cardiomyocytes. We developed a new solution in which they retained their shape and showed stable steady state respiration rates throughout an experiment. The apparent ADP-affinity of permeabilized cardiomyocytes was different from that of fibers. It was higher, independent of temperature and not increased by creatine. However, it was still about ten times lower than in isolated mitochondria. Conclusions The differences between fibers and cardiomyocytes suggest that results from trout heart fibers were affected by incomplete separation of the cells. However, the lower ADP-affinity of cardiomyocytes compared to isolated mitochondria indicate that intracellular diffusion restrictions are still present in trout cardiomyocytes despite their lower density of intracellular membrane structures. The lack of a creatine effect indicates that

  11. Effects of roads on bull trout (Salvelinus confluentus), a federally threatened species

    OpenAIRE

    Teachout, Emily; Quan, Jennifer

    2001-01-01

    The bull trout (Salvelinus confluentus) is federally listed as threatened under the Endangered Species Act. Bull trout are apex predators requiring a large prey base and a large home range, and are known to move throughout and between basins in search of prey. However, bull trout are dependent upon very cold, clean waters for spawning (below 9 degrees Celsius) and are typically characterized as spawning in the upper-most reaches of watersheds. Bull trout have four life history forms: resident...

  12. Differential metabolic profiles associated to movement behaviour of stream-resident brown trout (Salmo trutta)

    Science.gov (United States)

    Jové, Mariona; Pascual-Pons, Mariona; Royo, Jose Luis; Rocaspana, Rafel; Aparicio, Enric; Pamplona, Reinald; Palau, Antoni; Sanuy, Delfi; Fibla, Joan; Portero-Otin, Manuel

    2017-01-01

    The mechanisms that can contribute in the fish movement strategies and the associated behaviour can be complex and related to the physiology, genetic and ecology of each species. In the case of the brown trout (Salmo trutta), in recent research works, individual differences in mobility have been observed in a population living in a high mountain river reach (Pyrenees, NE Spain). The population is mostly sedentary but a small percentage of individuals exhibit a mobile behavior, mainly upstream movements. Metabolomics can reflect changes in the physiological process and can determine different profiles depending on behaviour. Here, a non-targeted metabolomics approach was used to find possible changes in the blood metabolomic profile of S. trutta related to its movement behaviour, using a minimally invasive sampling. Results showed a differentiation in the metabolomic profiles of the trouts and different level concentrations of some metabolites (e.g. cortisol) according to the home range classification (pattern of movements: sedentary or mobile). The change in metabolomic profiles can generally occur during the upstream movement and probably reflects the changes in metabolite profile from the non-mobile season to mobile season. This study reveals the contribution of the metabolomic analyses to better understand the behaviour of organisms. PMID:28750027

  13. Differential metabolic profiles associated to movement behaviour of stream-resident brown trout (Salmo trutta).

    Science.gov (United States)

    Oromi, Neus; Jové, Mariona; Pascual-Pons, Mariona; Royo, Jose Luis; Rocaspana, Rafel; Aparicio, Enric; Pamplona, Reinald; Palau, Antoni; Sanuy, Delfi; Fibla, Joan; Portero-Otin, Manuel

    2017-01-01

    The mechanisms that can contribute in the fish movement strategies and the associated behaviour can be complex and related to the physiology, genetic and ecology of each species. In the case of the brown trout (Salmo trutta), in recent research works, individual differences in mobility have been observed in a population living in a high mountain river reach (Pyrenees, NE Spain). The population is mostly sedentary but a small percentage of individuals exhibit a mobile behavior, mainly upstream movements. Metabolomics can reflect changes in the physiological process and can determine different profiles depending on behaviour. Here, a non-targeted metabolomics approach was used to find possible changes in the blood metabolomic profile of S. trutta related to its movement behaviour, using a minimally invasive sampling. Results showed a differentiation in the metabolomic profiles of the trouts and different level concentrations of some metabolites (e.g. cortisol) according to the home range classification (pattern of movements: sedentary or mobile). The change in metabolomic profiles can generally occur during the upstream movement and probably reflects the changes in metabolite profile from the non-mobile season to mobile season. This study reveals the contribution of the metabolomic analyses to better understand the behaviour of organisms.

  14. Fluvial rainbow trout contribute to the colonization of steelhead (Oncorhynchus mykiss) in a small stream

    Science.gov (United States)

    Weigel, Dana E.; Connolly, Patrick J.; Powell, Madison S.

    2013-01-01

    Life history polymorphisms provide ecological and genetic diversity important to the long term persistence of species responding to stochastic environments. Oncorhynchus mykiss have complex and overlapping life history strategies that are also sympatric with hatchery populations. Passive integrated transponder (PIT) tags and parentage analysis were used to identify the life history, origin (hatchery or wild) and reproductive success of migratory rainbow/steelhead for two brood years after barriers were removed from a small stream. The fluvial rainbow trout provided a source of wild genotypes to the colonizing population boosting the number of successful spawners. Significantly more parr offspring were produced by anadromous parents than expected in brood year 2005, whereas significantly more parr offspring were produced by fluvial parents than expected in brood year 2006. Although hatchery steelhead were prevalent in the Methow Basin, they produced only 2 parr and no returning adults in Beaver Creek. On average, individual wild steelhead produced more parr offspring than the fluvial or hatchery groups. Yet, the offspring that returned as adult steelhead were from parents that produced few parr offspring, indicating that high production of parr offspring may not be related to greater returns of adult offspring. These data in combination with other studies of sympatric life histories of O. mykiss indicate that fluvial rainbow trout are important to the conservation and recovery of steelhead and should be included in the management and recovery efforts.

  15. Synthetic Musk fragrances in Trout from Danish fish farms and human milk

    DEFF Research Database (Denmark)

    Duedahl-Olesen, Lene; Cederberg, Tommy Licht; Pedersen, K. H.

    2005-01-01

    /HRMS in Danish farmed trout and human milk from primiparous mothers are reported. The polycyclic musk, HHCB, dominated the synthetic musk compounds found in trout samples from 1999 with a median concentration of 5.0 mu g/kg fresh weight (n.d.-52.6 mu g/kg fresh weight) and in trout samples collected in 2003...

  16. Exploring trends, causes, and consequences of declining lipids in Lake Superior lake trout

    Science.gov (United States)

    The ability of lake trout to forage in deepwater habitats is facilitated by high lipid content, which affords buoyancy. In Lake Superior, lean lake trout historically occupied depths < 80 m, and siscowet lake trout occupied depths > 80 m. Siscowets have been known f...

  17. Rainbow trout responses to water temperature and dissolved oxygen stress in two southern California stream pools

    Science.gov (United States)

    K.R. Matthews; N.H. Berg

    1997-01-01

    Habitat use by rainbow trout Oncorhynchus mykiss is described for a southern California stream where the summer water temperatures typically exceed the lethal limits for trout (>25) C). During August 1994, water temperature, dissolved oxygen (DO), and trout distribution were monitored in two adjacent pools in Sespe Creek, Ventura County, where summer water...

  18. Cool Water Formation and Trout Habitat Use in a Deep Pool in the Sierra Nevada, California

    Science.gov (United States)

    KATHLEEN R. MATTHEWS; NEIL H. BERG; AZUMA DAVID L.

    1994-01-01

    We documented temperature stratification in a deep bedrock pool in the North Fork of the American River, described the diel movement of rainbow trout Oncorhynchus mykiss and brown trout Salmo trutta. and determined whether these trout used cooler portions of the pool.From July 30 to October 10, 1992, the main study pool and an adjacent pool were stratified(temperature...

  19. Exploring trends, causes, and consequences of declining lipids in Lake Superior lake trout

    Science.gov (United States)

    The ability of lake trout to forage in deepwater habitats is facilitated by high lipid content, which affords buoyancy. In Lake Superior, lean lake trout historically occupied depths < 80 m, and siscowet lake trout occupied depths > 80 m. Siscowets have been known f...

  20. A framework for assessing the feasibility of native fish conservation translocations: Applications to threatened bull trout

    Science.gov (United States)

    Galloway, Benjamin T.; Muhlfeld, Clint C.; Guy, Christopher S.; Downs, Christopher C.; Fredenberg, Wade A.

    2016-01-01

    There is an urgent need to consider more aggressive and direct interventions for the conservation of freshwater fishes that are threatened by invasive species, habitat loss, and climate change. Conservation introduction (moving a species outside its indigenous range to other areas where conditions are predicted to be more suitable) is one type of translocation strategy that fisheries managers can use to establish new conservation populations in areas of refugia. To date, however, there are few examples of successful conservation-based introductions. Many attempts fail to establish new populations—in part because environmental factors that might influence success are inadequately evaluated before the translocation is implemented. We developed a framework to assess the feasibility of rescuing threatened fish populations through translocation into historically unoccupied stream and lake habitats. The suitability of potential introduction sites was evaluated based on four major components: the recipient habitat, recipient community, donor population, and future threats. Specific questions were then developed to evaluate each major component. The final assessment was based on a scoring system that addressed each question by using criteria developed from characteristics representative of highly suitable habitats and populations. This framework was used to evaluate the proposed within-drainage translocation of three Bull Trout Salvelinus confluentus populations in Glacier National Park, Montana. Our results indicated that within-drainage translocation is a feasible strategy for conserving locally adapted populations of Bull Trout through the creation of new areas of refugia in Glacier National Park. The framework provides a flexible platform that can help managers make informed decisions for moving threatened fishes into new areas of refugia for conservation and recovery programs.

  1. Combined effects of salting, oregano oil and vacuum-packaging on the shelf-life of refrigerated trout fillets.

    Science.gov (United States)

    Frangos, L; Pyrgotou, N; Giatrakou, V; Ntzimani, A; Savvaidis, I N

    2010-02-01

    The present study evaluated the effect of salt, oregano essential oil (EO) and packaging on fresh rainbow trout fillets during storage at 4 degrees C. Treatments included the following: A1 (control samples, unsalted: air packaged), A2 (salted: air packaged), VP1 (salted, vacuum packaged), VP2 (salted, vacuum packaged with added oregano EO 0.2% v/wt), and VP3 salted, vacuum packaged with added oregano EO 0.4% v/wt). Lactic acid bacteria (LAB) (to a greater extent), followed by H(2)S-producing bacteria (including Shewanella putrefaciens), Pseudomonas spp. and Enterobacteriaceae reached higher populations in A1, A2 (as compared to VP1, VP2 and VP3) trout samples. Treatments VP1, VP2 and VP3 produced significantly lower (P TVBN) and trimethylamine nitrogen (TMAN) values as compared to the A1 and A2 samples after day 6 and until end of storage period. Changes in thiobarbituric acid values (TBA) values for A1, A2, VP1, VP2 and VP3 samples were variable, indicative of no specific trend in trout samples, irrespective of packaging in the absence and/or presence of salt and oregano EO. As determined by sensory analysis (overall acceptability attribute) the observed shelf-life of trout fillets was longest for VP2 (16-17 days) followed by VP1 (14 days), A2 (8 days) and control (A1) samples (5 days). The presence of salt and oregano oil (0.2%) in cooked VP1 trout samples produced a distinct but sensorially acceptable pleasant odor, well received by the panellists, in contrast to the combined effect of salt and oregano oil at the higher concentrations (0.4% v/wt) used. Addition of salt (treatment VP1) extended the product's shelf-life by 9 days, whereas the combination of salt, oregano EO (0.2% v/wt) under VP conditions (treatment VP2) resulted in a significant shelf-life extension of trout fillets (11-12 days) according to sensory data, as compared to the control sample, kept under aerobic conditions.

  2. A value orientation approach to assess and compare climate change risk perception among trout anglers in Georgia, USA

    Science.gov (United States)

    Ramesh Paudyal; Neelam C. Poudyal; J.M. Bowker; Adrienne M. Dorison; Stanley J. Zarnoch; Gary T. Green

    2015-01-01

    Trout in Georgia could experience early impacts from climate change as the streams in the region are located at the southern most edge of their North American home range. This study surveyed trout anglers in Georgia to understand how anglers perceive the potential impact of climate change on trout, and whether and how their perception and response to declines in trout...

  3. Intersex occurrence in rainbow trout (Oncorhynchus mykiss male fry chronically exposed to ethynylestradiol.

    Directory of Open Access Journals (Sweden)

    Sophie Depiereux

    Full Text Available This study aimed to investigate the male-to-female morphological and physiological transdifferentiation process in rainbow trout (Oncorhynchus mykiss exposed to exogenous estrogens. The first objective was to elucidate whether trout develop intersex gonads under exposure to low levels of estrogen. To this end, the gonads of an all-male population of fry exposed chronically (from 60 to 136 days post fertilization--dpf to several doses (from environmentally relevant 0.01 µg/L to supra-environmental levels: 0.1, 1 and 10 µg/L of the potent synthetic estrogen ethynylestradiol (EE2 were examined histologically. The morphological evaluations were underpinned by the analysis of gonad steroid (testosterone, estradiol and 11-ketotestosterone levels and of brain and gonad gene expression, including estrogen-responsive genes and genes involved in sex differentiation in (gonads: cyp19a1a, ER isoforms, vtg, dmrt1, sox9a2; sdY; cyp11b; brain: cyp19a1b, ER isoforms. Intersex gonads were observed from the first concentration used (0.01 µg EE2/L and sexual inversion could be detected from 0.1 µg EE2/L. This was accompanied by a linear decrease in 11-KT levels, whereas no effect on E2 and T levels was observed. Q-PCR results from the gonads showed downregulation of testicular markers (dmrt1, sox9a2; sdY; cyp11b with increasing EE2 exposure concentrations, and upregulation of the female vtg gene. No evidence was found for a direct involvement of aromatase in the sex conversion process. The results from this study provide evidence that gonads of male trout respond to estrogen exposure by intersex formation and, with increasing concentration, by morphological and physiological conversion to phenotypic ovaries. However, supra-environmental estrogen concentrations are needed to induce these changes.

  4. Ontogenetic shifts in terrestrial reliance of stream-dwelling brown trout

    Directory of Open Access Journals (Sweden)

    Javier Sánchez-Hernández

    2016-07-01

    Full Text Available This study focuses on terrestrial reliance of brown trout (Salmo trutta and compared it to the potential prey available (macrozoobenthos and drifting invertebrates in three temperate rivers (Galicia, NW Spain, with special emphasis on variations in terrestrial energy intake through the ontogeny of brown trout. Additionally, we paid particular attention to individual variation of terrestrial resource use within and between age classes. Prey items were grouped in four categories: i aquatic invertebrates; ii imagoes of aquatic invertebrates; iii terrestrial invertebrates; and iv fish prey. Next, energy composition was measured according to dry weight-energy equations for each individual in line with above-mentioned prey categories. Our findings illustrate that terrestrial invertebrates appeared to be scarce in the environment, whereas aquatic food resources were rather abundant and accessible. The use of terrestrial invertebrates tended to increase with age, but with a high degree of inter-individual variation in resource use. In fact, the individual reliance of brown trout on terrestrial invertebrates may vary considerably (between 0% and 76.9%. Besides, the frequency of terrestrial foragers, i.e., individuals with terrestrial invertebrates in their stomachs, increased with age, except in one population which had the maximum value in the age-2 class. The acquisition of terrestrial invertebrates thus appears to be a process strongly dependent upon the actual food availability in the environment, but with a high degree of individual variance in resource use within the same age class. Finally, we discuss that terrestrial invertebrates may largely contribute to cover the energy intake of the species, highlighting the interface between terrestrial and aquatic ecosystems, and thereby the importance of riparian canopy cover as a key factor for food supply of stream-dwelling salmonids species.

  5. Genetic and phenotypic variation along an ecological gradient in lake trout Salvelinus namaycush

    Science.gov (United States)

    Baillie, Shauna M.; Muir, Andrew M.; Hansen, Michael J.; Krueger, Charles Conrad; Bentzen, Paul

    2016-01-01

    BackgroundAdaptive radiation involving a colonizing phenotype that rapidly evolves into at least one other ecological variant, or ecotype, has been observed in a variety of freshwater fishes in post-glacial environments. However, few studies consider how phenotypic traits vary with regard to neutral genetic partitioning along ecological gradients. Here, we present the first detailed investigation of lake trout Salvelinus namaycushthat considers variation as a cline rather than discriminatory among ecotypes. Genetic and phenotypic traits organized along common ecological gradients of water depth and geographic distance provide important insights into diversification processes in a lake with high levels of human disturbance from over-fishing.ResultsFour putative lake trout ecotypes could not be distinguished using population genetic methods, despite morphological differences. Neutral genetic partitioning in lake trout was stronger along a gradient of water depth, than by locality or ecotype. Contemporary genetic migration patterns were consistent with isolation-by-depth. Historical gene flow patterns indicated colonization from shallow to deep water. Comparison of phenotypic (Pst) and neutral genetic variation (Fst) revealed that morphological traits related to swimming performance (e.g., buoyancy, pelvic fin length) departed more strongly from neutral expectations along a depth gradient than craniofacial feeding traits. Elevated phenotypic variance with increasing water depth in pelvic fin length indicated possible ongoing character release and diversification. Finally, differences in early growth rate and asymptotic fish length across depth strata may be associated with limiting factors attributable to cold deep-water environments.ConclusionWe provide evidence of reductions in gene flow and divergent natural selection associated with water depth in Lake Superior. Such information is relevant for documenting intraspecific biodiversity in the largest freshwater lake

  6. A comparison of oxolinic acid concentrations in farmed and laboratory held rainbow trout ( Oncorhynchus mykiss ) following oral therapy

    DEFF Research Database (Denmark)

    Coyne, R.; Samuelsen, O.; Kongshaug, H.;

    2004-01-01

    laboratory held rainbow trout (O. mykiss) following the administration of OXA under similar conditions of salinity, temperature and dosing regimen. In these laboratory held fish, the mean plasma OXA concentration was 0.133±0.068 mg/l. The major difference between the distributions of OXA concentrations...... in the farm and laboratory populations was in the extent of fish to fish variation observed. In the healthy farmed fish, the percentage coefficient of variation (%CV) was 97% compared to a %CV of 51% in the laboratory held fish. The patterns of the daily mortality in the farmed population were analysed from...

  7. Integrative Phylogeography of Calotriton Newts (Amphibia, Salamandridae), with Special Remarks on the Conservation of the Endangered Montseny Brook Newt (Calotriton arnoldi)

    Science.gov (United States)

    Valbuena-Ureña, Emilio; Amat, Fèlix; Carranza, Salvador

    2013-01-01

    The genus Calotriton includes two species of newts highly adapted to live in cold and fast-flowing mountain springs. The Pyrenean brook newt (Calotriton asper), restricted to the Pyrenean region, and the Montseny brook newt (Calotriton arnoldi), endemic to the Montseny massif and one of the most endangered amphibian species in Europe. In the present manuscript, we use an integrative approach including species distribution modeling (SDM), molecular analyses of mitochondrial and nuclear DNA sequence data and morphology to unravel the historical processes that have contributed to shaping the biogeography and genetic structure of the genus Calotriton, with special emphasis on the conservation of C. arnoldi. The results of the molecular analyses confirm that, despite having originated recently, being ecologically similar and geographically very close, there is no signal of hybridization between C. asper and C. arnoldi. SDM results suggest that tough environmental conditions on mountains tops during glacial periods, together with subsequent warmer periods could have prevented the contact between the two species. Within the critically endangered C. arnoldi, a high genetic structure is revealed despite its extremely small distribution range compared to C. asper. Haplotype networks, AMOVA and SAMOVA analyses suggest that two distinct groups of populations can be clearly differentiated with absence of gene flow. This is in concordance with morphological differentiation and correlates with its geographical distribution, as the two groups are situated on the eastern and western sides of a river valley that acts as a barrier. The genetic and morphological results are highly important for the ongoing conservation program of C. arnoldi and strongly justify the management of this species into at least two independent evolutionary significant units (eastern and western sectors) to guarantee the long-term population viability. PMID:23750201

  8. Integrative phylogeography of Calotriton newts (Amphibia, Salamandridae, with special remarks on the conservation of the endangered Montseny brook newt (Calotriton arnoldi.

    Directory of Open Access Journals (Sweden)

    Emilio Valbuena-Ureña

    Full Text Available The genus Calotriton includes two species of newts highly adapted to live in cold and fast-flowing mountain springs. The Pyrenean brook newt (Calotriton asper, restricted to the Pyrenean region, and the Montseny brook newt (Calotriton arnoldi, endemic to the Montseny massif and one of the most endangered amphibian species in Europe. In the present manuscript, we use an integrative approach including species distribution modeling (SDM, molecular analyses of mitochondrial and nuclear DNA sequence data and morphology to unravel the historical processes that have contributed to shaping the biogeography and genetic structure of the genus Calotriton, with special emphasis on the conservation of C. arnoldi. The results of the molecular analyses confirm that, despite having originated recently, being ecologically similar and geographically very close, there is no signal of hybridization between C. asper and C. arnoldi. SDM results suggest that tough environmental conditions on mountains tops during glacial periods, together with subsequent warmer periods could have prevented the contact between the two species. Within the critically endangered C. arnoldi, a high genetic structure is revealed despite its extremely small distribution range compared to C. asper. Haplotype networks, AMOVA and SAMOVA analyses suggest that two distinct groups of populations can be clearly differentiated with absence of gene flow. This is in concordance with morphological differentiation and correlates with its geographical distribution, as the two groups are situated on the eastern and western sides of a river valley that acts as a barrier. The genetic and morphological results are highly important for the ongoing conservation program of C. arnoldi and strongly justify the management of this species into at least two independent evolutionary significant units (eastern and western sectors to guarantee the long-term population viability.

  9. Integrative phylogeography of Calotriton newts (Amphibia, Salamandridae), with special remarks on the conservation of the endangered Montseny brook newt (Calotriton arnoldi).

    Science.gov (United States)

    Valbuena-Ureña, Emilio; Amat, Fèlix; Carranza, Salvador

    2013-01-01

    The genus Calotriton includes two species of newts highly adapted to live in cold and fast-flowing mountain springs. The Pyrenean brook newt (Calotriton asper), restricted to the Pyrenean region, and the Montseny brook newt (Calotriton arnoldi), endemic to the Montseny massif and one of the most endangered amphibian species in Europe. In the present manuscript, we use an integrative approach including species distribution modeling (SDM), molecular analyses of mitochondrial and nuclear DNA sequence data and morphology to unravel the historical processes that have contributed to shaping the biogeography and genetic structure of the genus Calotriton, with special emphasis on the conservation of C. arnoldi. The results of the molecular analyses confirm that, despite having originated recently, being ecologically similar and geographically very close, there is no signal of hybridization between C. asper and C. arnoldi. SDM results suggest that tough environmental conditions on mountains tops during glacial periods, together with subsequent warmer periods could have prevented the contact between the two species. Within the critically endangered C. arnoldi, a high genetic structure is revealed despite its extremely small distribution range compared to C. asper. Haplotype networks, AMOVA and SAMOVA analyses suggest that two distinct groups of populations can be clearly differentiated with absence of gene flow. This is in concordance with morphological differentiation and correlates with its geographical distribution, as the two groups are situated on the eastern and western sides of a river valley that acts as a barrier. The genetic and morphological results are highly important for the ongoing conservation program of C. arnoldi and strongly justify the management of this species into at least two independent evolutionary significant units (eastern and western sectors) to guarantee the long-term population viability.

  10. Ontogenetic taurine biosynthesis ability in rainbow trout (Oncorhynchus mykiss).

    Science.gov (United States)

    Wang, Xuan; He, Gen; Mai, Kangsen; Xu, Wei; Zhou, Huihui

    2015-07-01

    Taurine (2-aminoethane sulfonic acid) plays important roles in multiple physiological processes including osmoregulation, bile salt conjugation and membrane protection. It is known that taurine biosynthesis varies in different fish species. However, its ontogenetic regulation has not been clear. In the present study, we found that the hepatic concentrations of taurine increased marginally with rainbow trout growth. The mRNA expression, protein levels and enzyme activities of key enzymes involved in taurine biosynthesis, cysteine dioxygenase (CDO) and cysteine sulfinate decarboxylase (CSD), were analyzed. Our results showed that the mRNA levels and protein abundances of CSD increased dramatically with the development of rainbow trout stages while the enzyme activities showed a slight improvement. However, the expression and activities of CDO decreased with rainbow trout growth. These results provide valuable information on defining the exact supplementation of taurine in diets for different stages of rainbow trout and give new insights into elucidating the regulation of taurine metabolism in rainbow trout. Copyright © 2015 Elsevier Inc. All rights reserved.

  11. Indirect benefits for female salmon from mating with brown trout.

    Science.gov (United States)

    Castillo, Ana G F; Beall, Edward; Morán, Paloma; Martinez, Jose L; Garcia-Vazquez, Eva

    2010-01-01

    By genetic analysis of 1625 samples from 10 south European rivers, we have found that Atlantic salmon Salmo salar hybridize with sympatric brown trout S. trutta in the wild and provide the female in most heterospecific crosses. Hybrids exhibit reduced fertility and could be considered a wasted reproductive effort by salmon females. In 7 experiments involving salmon females, large brown trout males, and small salmon male sneakers, reproductive success of Atlantic salmon females mating with brown trout males was not significantly different from that of 5 experiments of females mating with conspecific males because small Atlantic salmon sneakers fertilized most ova (mean 93%) in salmon x trout matings. Although egg retention tended to be higher in heterospecific than in conspecific crosses (mean 5.7% vs. 20.5% respectively), mean offspring survival was 24.4% and 30.3%, respectively (t = 1.5 x 10(-8), not significant). Brown trout males taking on a courting role may benefit late-maturing females in absence or scarcity of anadromous salmon males because they play a protective role against disturbances from other fishes (including cannibal sneakers).

  12. Sperm in hot water: direct and indirect thermal challenges interact to impact on brown trout sperm quality.

    Science.gov (United States)

    Fenkes, Miriam; Fitzpatrick, John L; Ozolina, Karlina; Shiels, Holly A; Nudds, Robert L

    2017-07-15

    Climate change alters the thermal habitat of aquatic species on a global scale, generating novel environmental challenges during all life stages, including reproduction. Changes in water temperature profoundly influence the performance of ectothermic aquatic organisms. This is an especially crucial issue for migratory fish, because they traverse multiple environments in order to reproduce. In externally fertilizing migratory fish, gametes are affected by water temperature indirectly, within the reproductive organ in which they are produced during migration, as well as directly, upon release into the surrounding medium at the spawning grounds. Both direct (after release) and indirect (during production) thermal impacts on gamete quality have been investigated, but never in conjunction. Here, we assessed the cumulative influence of temperature on brown trout, Salmo trutta, sperm quality during sperm production (male acclimation temperature) as well as upon release (sperm activation water temperature) on two consecutive dates during the brown trout spawning season. Early in the season, warm acclimation of males reduced their fertilization probability (lower sperm velocity) when compared with cold-acclimated males, especially when the activation water temperature was also increased beyond the thermal optimum (resulting in a lower proportion of motile sperm with lower velocity). Later in the season, sperm quality was unaffected by acclimation temperature and thermal sensitivity of sperm was reduced. These results give novel insights into the complex impacts of climate change on fish sperm, with implications for the reproduction and management of hatchery and wild trout populations in future climate scenarios. © 2017. Published by The Company of Biologists Ltd.

  13. Stock Identification of Columbia River Chinook Salmon and Steelhead Trout, 1986 Final Report.

    Energy Technology Data Exchange (ETDEWEB)

    Schreck, Carl B.; Li, Hiran W.; Hjort, Randy C.

    1986-08-01

    For the first time genetic similarities among chinook salmon and among steelhead trout stocks of the Columbia River were determined using a holistic approach including analysis of life history, biochemical, body shape and meristic characters. We examined between year differences for each of the stock characteristics and we also correlated the habitat characteristics with the wild stock characteristics. The most important principle for managing stocks of Columbia River chinook salmon and steelhead trout is that geographically proximal stocks tend to be like each other. Run timing and similarity of the stream systems should be taken into account when managing stocks. There are similarities in the classifications derived for chinook salmon and steelhead trout. Steelhead trout or chinook salmon tend to be genetically similar to other steelhead or chinook stocks, respectively, that originate from natal streams that are geographically close, regardless of time of freshwater entry. The primary exception Lo this trend is between stocks of spring and fall chinook in the upper Columbia River where fish with the different run timings are dissimilar, though geographically proximate stocks within a run form are generally very similar. Spring chinook stocks have stronger affinities to other spring chinook stocks that originate in the same side of the Cascade Range than to these Spring chinook stock: spawned on the other side of the Cascade Range. Spring chinook from west of the Cascades are more closely related to fall chinook than they are to spring chinook from east of the Cascades. Summer chinook can be divided into two main groups: (1) populations in the upper Columbia River that smolt as subyearlings and fall chinook stocks; and (2) summer chinook stocks from the Salmon River, Idaho, which smolt as yearlings and are similar to spring chinook stocks from Idaho. Fall chinook appear to comprise one large diverse group that is not easily subdivided into smaller subgroups. In

  14. Stock Identification of Columbia River Chinook Salmon and Steelhead Trout, 1986 Final Report.

    Energy Technology Data Exchange (ETDEWEB)

    Schreck, Carl B.; Li, Hiran W.; Hjort, Randy C.

    1986-08-01

    For the first time genetic similarities among chinook salmon and among steelhead trout stocks of the Columbia River were determined using a holistic approach including analysis of life history, biochemical, body shape and meristic characters. We examined between year differences for each of the stock characteristics and we also correlated the habitat characteristics with the wild stock characteristics. The most important principle for managing stocks of Columbia River chinook salmon and steelhead trout is that geographically proximal stocks tend to be like each other. Run timing and similarity of the stream systems should be taken into account when managing stocks. There are similarities in the classifications derived for chinook salmon and steelhead trout. Steelhead trout or chinook salmon tend to be genetically similar to other steelhead or chinook stocks, respectively, that originate from natal streams that are geographically close, regardless of time of freshwater entry. The primary exception Lo this trend is between stocks of spring and fall chinook in the upper Columbia River where fish with the different run timings are dissimilar, though geographically proximate stocks within a run form are generally very similar. Spring chinook stocks have stronger affinities to other spring chinook stocks that originate in the same side of the Cascade Range than to these Spring chinook stock: spawned on the other side of the Cascade Range. Spring chinook from west of the Cascades are more closely related to fall chinook than they are to spring chinook from east of the Cascades. Summer chinook can be divided into two main groups: (1) populations in the upper Columbia River that smolt as subyearlings and fall chinook stocks; and (2) summer chinook stocks from the Salmon River, Idaho, which smolt as yearlings and are similar to spring chinook stocks from Idaho. Fall chinook appear to comprise one large diverse group that is not easily subdivided into smaller subgroups. In

  15. Identification of Larval Pacific Lampreys (Lampetra Tridentata), River Lampreys (L. Ayresi) and Western Brook Lampreys (L. Richardson) and Thermal Requirements of Early Life History Stages of Lampreys : Annual Report 2002.

    Energy Technology Data Exchange (ETDEWEB)

    Meeuwig, Michael H.

    2003-02-01

    Two fundamental aspects of lamprey biology were examined to provide tools for population assessment and determination of critical habitat needs of Columbia River Basin lampreys (the Pacific lamprey, Lampetra tridentata, and the western brook lamprey, L. richardsoni). In particular: (1) we examined the usefulness of current diagnostic characteristics in identification of larval lampreys, specifically pigmentation patterns, and collected material for development of meristic and morphometric descriptions of early life stages of lampreys, and (2) we examined the effects of temperature on survival and development of early life stages of Columbia River Basin lampreys.

  16. Toxicity of five forest insecticides to cutthroat trout and two species of aquatic invertebrates

    Science.gov (United States)

    Woodward, D.F.; Mauck, W.L.

    1980-01-01

    The Northern Rocky Mountain region has had scattered infestation of the western spruce budworm Christoneura occidentalis since the early 1900's (U.S. DEPARTMENT OF AGRICULTURE (USDA) 1976b). On the basis of aerial surveys in 1975, TUNNOCK et al. (1976), estimated that budworm defoliation occurred on 2,278,804 acres of six National Forests in Montana. Since the use of DDT was banned in 1972, there has been a need to develop alternative insecticides with the efficacy of DDT but without its environmental risk. These insecticides must be effective in controlling the budworm, but should not persist in the environment or be toxic to other organisms. The organophosphate and carbamate insecticides are relatively nonpersistent and generally present only a moderate hazard to fish when applied according to label recommendations. The USDA Forest Service has been investigating the effectiveness of these two classes of insecticides against the budworm, and the Columbia National Fisheries Research Laboratory of the U.S. Fish and Wildlife Service has been cooperating with the Forest Service conducted pilot control projects in eastern Montana in 1975 and 1976 to determine the efficacy and environmental impact of acephate, carbaryl, and trichlorfon in controlling the western budworm (USDA 1976 b). In 1975, a similar type project was carried out in Maine with aminocarb, fenitrothion, and trichlorfon (USDA 1976 a).Acephate, fenitrothion, and trichlorfon (organophosphate insecticides) and aminocarb and carbaryl (carbamate insecticides) were selected for toxicity tests against cutthroat trout (Salmo clarki), a stonefly (Pteronarcella badia), and a freshwater amphipod (Gammarus pseudolimnaeus) edemic in streams of the northern Rocky Mountains. Populations of cutthroat trout inhabit lakes and streams in the Rocky Mountains which include some of the most pristine habitat and fisheries in North America. Pteronarcella and Gammarus provide forage for cutthroat trout and feed on decaying

  17. A novel member of the family Hepeviridae from cutthroat trout (Oncorhynchus clarkii)

    Science.gov (United States)

    Batts, William; Yun, Susan; Hedrick, Ronald; Winton, James

    2011-01-01

    Beginning in 1988, the Chinook salmon embryo (CHSE-214) cell line was used to isolate a novel virus from spawning adult trout in the state of California, USA. Termed the cutthroat trout (Oncorhynchus clarkii) virus (CTV), the small, round virus was not associated with disease, but was subsequently found to be present in an increasing number of trout populations in the western USA, likely by a combination of improved surveillance activities and the shipment of infected eggs to new locations. Here, we report that the full length genome of the 1988 Heenan Lake isolate of CTV consisted of 7269 nucleotides of positive-sense, single-stranded RNA beginning with a 5' untranslated region (UTR), followed by three open reading frames (ORFs), a 3' UTR and ending in a polyA tail. The genome of CTV was similar in size and organization to that of Hepatitis E virus (HEV) with which it shared the highest nucleotide and amino acid sequence identities. Similar to the genomes of human, rodent or avian hepeviruses, ORF 1 encoded a large, non-structural polyprotein that included conserved methyltransferase, protease, helicase and polymerase domains, while ORF 2 encoded the structural capsid protein and ORF 3 the phosphoprotein. Together, our data indicated that CTV was clearly a member of the family Hepeviridae, although the level of amino acid sequence identity with the ORFs of mammalian or avian hepeviruses (13-27%) may be sufficiently low to warrant the creation of a novel genus. We also performed a phylogenetic analysis using a 262. nt region within ORF 1 for 63 isolates of CTV obtained from seven species of trout reared in various geographic locations in the western USA. While the sequences fell into two genetic clades, the overall nucleotide diversity was low (less than 8.4%) and many isolates differed by only 1-2 nucleotides, suggesting an epidemiological link. Finally, we showed that CTV was able to form persistently infected cultures of the CHSE-214 cell line that may have use

  18. Unraveling the Timing of Fluid Migration and Trap Formation in the Brooks Range Foothills: A Key to Discovering Hydrocarbons

    Energy Technology Data Exchange (ETDEWEB)

    Catherine L. Hanks

    2008-12-31

    Naturally occurring fractures can play a key role in the evolution and producibility of a hydrocarbon accumulation. Understanding the evolution of fractures in the Brooks Range/Colville basin system of northern Alaska is critical to developing a better working model of the hydrocarbon potential of the region. This study addressed this problem by collecting detailed and regional data on fracture distribution and character, structural geometry, temperature, the timing of deformation along the Brooks Range rangefront and adjacent parts of the Colville basin, and the in situ stress distribution within the Colville basin. This new and existing data then were used to develop a model of how fractures evolved in northern Alaska, both spatially and temporally. The results of the study indicate that fractures formed episodically throughout the evolution of northern Alaska, due to a variety of mechanisms. Four distinct fracture sets were observed. The earliest fractures formed in deep parts of the Colville basin and in the underlying Ellesmerian sequence rocks as these rocks experienced compression associated with the growing Brooks Range fold-and-thrust belt. The orientation of these deep basin fractures was controlled by the maximum in situ horizontal stress in the basin at the time of their formation, which was perpendicular to the active Brooks Range thrust front. This orientation stayed consistently NS-striking for most of the early history of the Brooks Range and Colville basin, but changed to NW-striking with the development of the northeastern Brooks Range during the early Tertiary. Subsequent incorporation of these rocks into the fold-and-thrust belt resulted in overprinting of these deep basin fractures by fractures caused by thrusting and related folding. The youngest fractures developed as rocks were uplifted and exposed. While this general order of fracturing remains consistent across the Brooks Range and adjacent Colville basin, the absolute age at any one

  19. Evidence of Lake Trout reproduction at Lake Michigan's mid-lake reef complex

    Science.gov (United States)

    Janssen, J.; Jude, D.J.; Edsall, T.A.; Paddock, R.W.; Wattrus, N.; Toneys, M.; McKee, P.

    2006-01-01

    The Mid-Lake Reef Complex (MLRC), a large area of deep (> 40 m) reefs, was a major site where indigenous lake trout (Salvelinus namaycush) in Lake Michigan aggregated during spawning. As part of an effort to restore Lake Michigan's lake trout, which were extirpated in the 1950s, yearling lake trout have been released over the MLRC since the mid-1980s and fall gill net censuses began to show large numbers of lake trout in spawning condition beginning about 1999. We report the first evidence of viable egg deposition and successful lake trout fry production at these deep reefs. Because the area's existing bathymetry and habitat were too poorly known for a priori selection of sampling sites, we used hydroacoustics to locate concentrations of large fish in the fall; fish were congregating around slopes and ridges. Subsequent observations via unmanned submersible confirmed the large fish to be lake trout. Our technological objectives were driven by biological objectives of locating where lake trout spawn, where lake trout fry were produced, and what fishes ate lake trout eggs and fry. The unmanned submersibles were equipped with a suction sampler and electroshocker to sample eggs deposited on the reef, draw out and occasionally catch emergent fry, and collect egg predators (slimy sculpin Cottus cognatus). We observed slimy sculpin to eat unusually high numbers of lake trout eggs. Our qualitative approaches are a first step toward quantitative assessments of the importance of lake trout spawning on the MLRC.

  20. Changing numbers of spawning cutthroat trout in tributary streams of Yellowstone Lake and estimates of grizzly bears visiting streams from DNA

    Science.gov (United States)

    Haroldson, M.A.; Gunther, K.A.; Reinhart, D.P.; Podruzny, S.R.; Cegelski, C.; Waits, L.; Wyman, T.C.; Smith, J.

    2005-01-01

    Spawning Yellowstone cutthroat trout (Oncorhynchus clarki) provide a source of highly digestible energy for grizzly bears (Ursus arctos) that visit tributary streams to Yellowstone Lake during the spring and early summer. During 1985–87, research documented grizzly bears fishing on 61% of the 124 tributary streams to the lake. Using track measurements, it was estimated that a minimum of 44 grizzly bears fished those streams annually. During 1994, non-native lake trout (Salvelinus namaycush) were discovered in Yellowstone Lake. Lake trout are efficient predators and have the potential to reduce the native cutthr