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Sample records for bronchiolar clara ciliated

  1. Immunohistochemical demonstration of Clara cell antigen in lung tumors of bronchiolar origin induced by N-nitrosodiethylamine in Syrian golden hamsters.

    Science.gov (United States)

    Rehm, S.; Takahashi, M.; Ward, J. M.; Singh, G.; Katyal, S. L.; Henneman, J. R.

    1989-01-01

    Both alveolar type II cells and Clara cells have been suggested as cells of origin of human bronchioloalveolar lung carcinomas and other pulmonary neoplasms, based on the presence of cell specific markers identified by immunocytochemical methods. Alveolar type II cell origin of solid and papillary lung tumors of the mouse has been demonstrated, and Clara cells have been suggested as cell of origin for hamster pulmonary neoplasms. Therefore, chemically induced bronchiolar hyperplasias and pulmonary neoplasms of Syrian golden hamsters were analyzed by avidin-biotin immunohistochemistry to localize a hamster-specific Clara cell antigen (CCA) and keratin. The hamsters had been treated subcutaneously with multiple doses of N-nitrosodiethylamine (NDEA). Proliferative lesions of low cuboidal, tall columnar, or pleomorphic cells were present within bronchioles or adjacent to airways in the alveolar parenchyma. Frequently areas of squamous cell differentiation were present focally or diffusely that were immunoreactive for cytokeratin. Immunoreactivity for cytokeratin was also noted for hyperplastic bronchiolar neuroepithelial bodies. Cellular hyperplasias extending out into the alveolar parenchyma contained ciliated cells and frequently consisted of cells immunoreactive for CCA, showing them to be of bronchiolar Clara cell origin. Tumors developed from bronchiolar cell hyperplasias localized within bronchioles and from bronchiolar cells lining former alveolar walls. Neoplastic growth patterns were tubulo-papillary, forming loose networks or densely cellular areas. Immunoreactivity for cytoplasmic CCA was found in 50% of the tumors and was seen most frequently in small cuboidal cells and larger, vacuolated cells scattered throughout the neoplasms. In summary, evidence is presented that NDEA-induced pulmonary tumors of the Syrian golden hamster originated from cells lining bronchioles and from extrabronchiolar Clara cell hyperplasias of the terminal bronchioles. As the

  2. Mouse bronchiolar cell carcinogenesis. Histologic characterization and expression of Clara cell antigen in lesions induced by N-nitrosobis-(2-chloroethyl) ureas.

    Science.gov (United States)

    Rehm, S.; Lijinsky, W.; Singh, G.; Katyal, S. L.

    1991-01-01

    Female Swiss mice (Cr:NIH(S)) developed bronchiolar cell hyperplasia, dysplasia, metaplasia, and various morphologic types of bronchiolar cell tumors after topical (skin) application of N-nitroso-methyl-bis-chloroethylurea (NMBCU) or N-nitroso-tris-chloroethylurea (NTCU). These compounds are the first found to induce systemically bronchiolar cell tumors in mice in high incidence. Twice a week, with a 3-day interval, a 25-microliter drop of 0.04 mol/l (molar) NMBCU or NTCU in acetone was applied to the shaved interscapular integument for a maximum of 35 to 40 weeks. The earliest lung neoplasms were seen in mice that died after 23 weeks of treatment and affected 11 of 19 with NMBCU and 14 of 19 with NTCU treatment. Tumor growth pattern was nodular or the neoplastic tissue was frequently disseminated throughout the parenchyma, starting from multicentric peribronchiolar foci. The most common tumor types were squamous cell carcinomas and adenosquamous carcinomas, followed by adenocarcinomas with or without secretory cells, and a single ciliated-cell tumor. Histochemical and immunohistochemical studies were carried out on paraffin-embedded lungs using the avidin-biotin immunoperoxidase complex procedure and antisera against keratin, Clara cell antigen, surfactant apoprotein, neuron-specific enolase, bombesin, and chromogranin A. In several mice from both groups, hyperplasias and tumors were composed of cells expressing Clara cell antigen. No tumor cells were found expressing alveolar type II or neuroendocrine cell markers. It appeared that bronchiolar cells, in particular Clara cells, had migrated from terminal bronchioles or invaded bronchiolar walls to extend into the alveolar parenchyma. Squamous cell metaplasia with keratin expression was seen within airways or associated with glandular tumors, especially at the periphery. A unique cell type, with large eosinophilic globules and associated eosinophilic crystals, was seen lining airways or forming hyperplastic and

  3. Prospective Isolation of Bronchiolar Stem Cells Based Upon Immunophenotypic and Autofluorescence Characteristics

    Science.gov (United States)

    Teisanu, Roxana M.; Lagasse, Eric; Whitesides, John F.; Stripp, Barry R.

    2009-01-01

    Bronchiolar stem cells have been functionally defined in vivo on the basis of their resistance to chemical (naphthalene) injury, their infrequent proliferation relative to other progenitor cell types, and their coexpression of the airway and alveolar secretory cell markers Clara cell secretory protein and pro-surfactant protein C, respectively. Cell surface markers that have previously been used for their prospective isolation included Sca-1 and CD34. Using transgenic animal models associated with stem cell expansion, ablation, and lineage tracing, we demonstrate that CD34pos cells do not belong to the airway epithelial lineage and that cell surface Sca-1 immunoreactivity does not distinguish between bronchiolar stem and facultative transit-amplifying (Clara) cell populations. Furthermore, we show that high autofluorescence (AFhigh) is a distinguishing characteristic of Clara cells allowing for the fractionation of AFlow bronchiolar stem cells. On the basis of these data we show that the defining phenotype of the bronchiolar stem cell is CD45neg CD31neg CD34neg Sca-llow AFlow. This refinement in the definition of bronchiolar stem cells provides a critical tool by which to assess functional and molecular distinctions between bronchiolar stem cells and the more abundant pool of facultative transit-amplifying (Clara) cells. PMID:19056905

  4. Novel method for isolation of murine clara cell secretory protein-expressing cells with traces of stemness.

    Directory of Open Access Journals (Sweden)

    Xiao-Yang Wang

    Full Text Available Clara cells are non-ciliated, secretory bronchiolar epithelial cells that serve to detoxify harmful inhaled substances. Clara cells also function as stem/progenitor cells for repair in the bronchioles. Clara cell secretory protein (CCSP is specifically expressed in pulmonary Clara cells and is widely used as a Clara cell marker. In addition CCSP promoter is commonly used to direct gene expression into the lung in transgenic models. The discovery of CCSP immunoreactivity in plasma membranes of airway lining cells prompted us to explore the possibility of enriching Clara cells by flow cytometry. We established a novel and simple method for the isolation of CCSP-expressing cell Clara cells using a combination of mechanical and enzymatic dissociation followed by flow cytometry sorting technology. We showed that ∼25% of dissociated cells from whole lung expressed CCSP. In the resulting preparation, up to 98% of cells expressed CCSP. Notably, we found that several common stem cell markers including CD44, CD133, Sca-1 and Sox2 were expressed in CCSP(+ cells. Moreover, CCSP(+ cells were able to form spheroid colonies in vitro with 0.97‰ efficiency. Parallel studies in vivo confirmed that a small population of CCSP(-expressing cells in mouse airways also demonstrates stem cell-like properties such as label retention and harboring rare bronchioalveolar stem cells (BASCs in terminal bronchioles (TBs. We conclude that CCSP(+ cells exhibit a number of stem cell-like features including stem cell marker expression, bronchosphere colony formation and self-renewal ability. Clara cell isolation by flow cytometry sorting is a useful method for investigating the function of primary Clara cells in stem cell research and mouse models.

  5. Ozone-induced injury and oxidative stress in bronchiolar epithelium are associated with altered pulmonary mechanics.

    Science.gov (United States)

    Sunil, Vasanthi R; Vayas, Kinal N; Massa, Christopher B; Gow, Andrew J; Laskin, Jeffrey D; Laskin, Debra L

    2013-06-01

    In these studies, we analyzed the effects of ozone on bronchiolar epithelium. Exposure of rats to ozone (2 ppm, 3 h) resulted in rapid (within 3 h) and persistent (up to 72 h) histological changes in the bronchiolar epithelium, including hypercellularity, loss of cilia, and necrotizing bronchiolitis. Perivascular edema and vascular congestion were also evident, along with a decrease in Clara cell secretory protein in bronchoalveolar lavage, which was maximal 24 h post-exposure. Ozone also induced the appearance of 8-hydroxy-2'-deoxyguanosine, Ym1, and heme oxygenase-1 in the bronchiolar epithelium. This was associated with increased expression of cleaved caspase-9 and beclin-1, indicating initiation of apoptosis and autophagy. A rapid and persistent increase in galectin-3, a regulator of epithelial cell apoptosis, was also observed. Following ozone exposure (3-24 h), increased expression of cyclooxygenase-2, inducible nitric oxide synthase, and arginase-1 was noted in bronchiolar epithelium. Ozone-induced injury and oxidative stress in bronchiolar epithelium were linked to methacholine-induced alterations in pulmonary mechanics. Thus, significant increases in lung resistance and elastance, along with decreases in lung compliance and end tidal volume, were observed at higher doses of methacholine. This indicates that ozone causes an increase in effective stiffness of the lung as a consequence of changes in the conducting airways. Collectively, these studies demonstrate that bronchiolar epithelium is highly susceptible to injury and oxidative stress induced by acute exposure to ozone; moreover, this is accompanied by altered lung functioning.

  6. Primary bronchiolar disorders: diagnosis and treatment

    Directory of Open Access Journals (Sweden)

    Georgios Patsourakis

    2010-01-01

    Full Text Available SUMMARY. Bronchiolitis is a generic term applied to a variety of inflammatory diseases that affect the bronchioles, sparing a considerable portion of the other parenchymal structures, in which both inflammatory cells and mesenchymal tissue are present. Bronchiolitis occurs in a variety of clinical settings and may be associated with large airway disease and parenchymal disease. The symptoms and signs of bronchiolitis are nonspecific and polymorphous. The course is usually chronic, but it may be acute or subacute. The advent of high resolution computerized tomography scan (HRCT has enabled the identification of more specific patterns that correlate with the involvement of the small airways, and it is clinically useful for confirmation of suspected bronchiolar lesions. Recently, improvement has been noted in the prognosis and clinical outcome of the disease mainly as a result of the application of macrolide treatment. Currently many clinical trials are in progress aimed at the identification of the most appropriate treatment for each specific type of bronchiolitis. Pneumon 2010, 23(1:48-79.

  7. Bronchiolar disease: spectrum and radiological findings

    Energy Technology Data Exchange (ETDEWEB)

    Takahashi, Masashi; Murata, Kiyoshi; Takazakura, Ryutaro; Nakahara, Tetsuro; Shimizu, Kentaro; Minese, Mariko; Itoh, Harumi

    2000-07-01

    Two types of bronchiole, the terminal bronchiole and the respiratory bronchiole, have structural and functional differences. The former is characterized as a conducting airway and the latter is closely related to a gas-exchange function as it has numerous alveoli on the wall. Therefore, the diseases occurring at bronchiole demonstrate different pathological, radiological and clinical pictures depending on which bronchiole is mainly involved. The disease that mainly involves the conducting airway is appreciated as a small airway disease. Constrictive bronchiolitis is a well-recognized entity classified in this category. Whereas the disease mainly involves the respiratory bronchiole and distal alveolar space, it is recognized as an interstitial and parenchymal disease. BOOP or RB-ILD is classified in this category. These two types of bronchiolar diseases reveal the contrast clinical pictures, including incidence, causative disease, response to the treatment, prognosis, respiratory function test as well as the radiological findings. This pictorial essay will illustrate the radiological features of the varieties of bronchiolitis.

  8. Involvement of Igf1r in Bronchiolar Epithelial Regeneration: Role during Repair Kinetics after Selective Club Cell Ablation

    Science.gov (United States)

    López, Icíar P.; Piñeiro-Hermida, Sergio; Pais, Rosete S.; Torrens, Raquel; Hoeflich, Andreas; Pichel, José G.

    2016-01-01

    Regeneration of lung epithelium is vital for maintaining airway function and integrity. An imbalance between epithelial damage and repair is at the basis of numerous chronic lung diseases such as asthma, COPD, pulmonary fibrosis and lung cancer. IGF (Insulin-like Growth Factors) signaling has been associated with most of these respiratory pathologies, although their mechanisms of action in this tissue remain poorly understood. Expression profiles analyses of IGF system genes performed in mouse lung support their functional implication in pulmonary ontogeny. Immuno-localization revealed high expression levels of Igf1r (Insulin-like Growth Factor 1 Receptor) in lung epithelial cells, alveolar macrophages and smooth muscle. To further understand the role of Igf1r in pulmonary homeostasis, two distinct lung epithelial-specific Igf1r mutant mice were generated and studied. The lack of Igf1r disturbed airway epithelial differentiation in adult mice, and revealed enhanced proliferation and altered morphology in distal airway club cells. During recovery after naphthalene-induced club cell injury, the kinetics of terminal bronchiolar epithelium regeneration was hindered in Igf1r mutants, revealing increased proliferation and delayed differentiation of club and ciliated cells. Amid airway restoration, lungs of Igf1r deficient mice showed increased levels of Igf1, Insr, Igfbp3 and epithelial precursor markers, reduced amounts of Scgb1a1 protein, and alterations in IGF signaling mediators. These results support the role of Igf1r in controlling the kinetics of cell proliferation and differentiation during pulmonary airway epithelial regeneration after injury. PMID:27861515

  9. The Story of Clara Pickle

    Institute of Scientific and Technical Information of China (English)

    问号

    2005-01-01

    Everyone in town knew Clara Pickle.She was asdear and sw eet as anyone could be.In fact,it wasClara Pickle's good nature that gother in trouble.O ne day a grey cat w andered into Clara’skitchen.Clara,who lived alone,took the cat in.Shewas glad for the com pany.The nextm orning she letthecat out for a breath of fresh air.W hen the cat cam eback that afternoon,he was no longer alone.H e hadbrought his entire fam ily and m ost ofhis friends.Therewere thirty-four cats in all。Clare,sweet soul that she was,adopte...

  10. CLARA: CLAS12 Reconstruction and Analysis Framework

    Energy Technology Data Exchange (ETDEWEB)

    Gyurjyan, Vardan [Thomas Jefferson National Accelerator Facility (TJNAF), Newport News, VA (United States); Matta, Sebastian Mancilla [Santa Maria U., Valparaiso, Chile; Oyarzun, Ricardo [Santa Maria U., Valparaiso, Chile

    2016-11-01

    In this paper we present SOA based CLAS12 event Reconstruction and Analyses (CLARA) framework. CLARA design focus is on two main traits: real-time data stream processing, and service-oriented architecture (SOA) in a flow based programming (FBP) paradigm. Data driven and data centric architecture of CLARA presents an environment for developing agile, elastic, multilingual data processing applications. The CLARA framework presents solutions capable of processing large volumes of data interactively and substantially faster than batch systems.

  11. CLARA: CLAS12 Reconstruction and Analysis Framework

    Science.gov (United States)

    Gyurgyan, V.; Mancilla, S.; Oyarzún, R.

    2016-10-01

    In this paper we present SOA based CLAS12 event Reconstruction and Analyses (CLARA) framework. CLARA design focus is on two main traits: real-time data stream processing, and service-oriented architecture (SOA) in a flow based programming (FBP) paradigm. Data driven and data centric architecture of CLARA presents an environment for developing agile, elastic, multilingual data processing applications. The CLARA framework presents solutions capable of processing large volumes of data interactively and substantially faster than batch systems.

  12. : a database of ciliate genome rearrangements.

    Science.gov (United States)

    Burns, Jonathan; Kukushkin, Denys; Lindblad, Kelsi; Chen, Xiao; Jonoska, Nataša; Landweber, Laura F

    2016-01-01

    Ciliated protists exhibit nuclear dimorphism through the presence of somatic macronuclei (MAC) and germline micronuclei (MIC). In some ciliates, DNA from precursor segments in the MIC genome rearranges to form transcriptionally active genes in the mature MAC genome, making these ciliates model organisms to study the process of somatic genome rearrangement. Similar broad scale, somatic rearrangement events occur in many eukaryotic cells and tumors. The (http://oxytricha.princeton.edu/mds_ies_db) is a database of genome recombination and rearrangement annotations, and it provides tools for visualization and comparative analysis of precursor and product genomes. The database currently contains annotations for two completely sequenced ciliate genomes: Oxytricha trifallax and Tetrahymena thermophila.

  13. CLARA: an integrated clinical research administration system.

    Science.gov (United States)

    Bian, Jiang; Xie, Mengjun; Hogan, William; Hutchins, Laura; Topaloglu, Umit; Lane, Cheryl; Holland, Jennifer; Wells, Thomas

    2014-10-01

    Administration of human subject research is complex, involving not only the institutional review board but also many other regulatory and compliance entities within a research enterprise. Its efficiency has a direct and substantial impact on the conduct and management of clinical research. In this paper, we report on the Clinical Research Administration (CLARA) platform developed at the University of Arkansas for Medical Sciences. CLARA is a comprehensive web-based system that can streamline research administrative tasks such as submissions, reviews, and approval processes for both investigators and different review committees on a single integrated platform. CLARA not only helps investigators to meet regulatory requirements but also provides tools for managing other clinical research activities including budgeting, contracting, and participant schedule planning.

  14. Clara Maass, yellow fever and human experimentation.

    Science.gov (United States)

    Chaves-Carballo, Enrique

    2013-05-01

    Clara Louise Maass, a 25-year-old American nurse, died of yellow fever on August 24, 1901, following experimental inoculation by infected mosquitoes in Havana, Cuba. The human yellow fever experiments were initially conducted by MAJ Walter Reed, who first used written informed consent and proved the validity of Finlay's mosquito-vector hypothesis. Despite informed consent form and an incentive of $100 in U.S. gold, human subjects were exposed to a deadly virus. The deaths of Clara Maass and two Spanish immigrants resulted in a public outcry and the immediate cessation of yellow fever human experiments in Cuba.

  15. 78 FR 66982 - Santa Clara Pueblo Disaster #NM-00039

    Science.gov (United States)

    2013-11-07

    ... ADMINISTRATION Santa Clara Pueblo Disaster NM-00039 AGENCY: U.S. Small Business Administration. ACTION: Notice... for the Santa Clara Pueblo (FEMA- 4151-DR), dated 10/29/2013. Incident: Severe Storms and Flooding... disaster: Primary Areas: Santa Clara Pueblo. The Interest Rates are: Percent For Physical Damage:...

  16. 27 CFR 9.126 - Santa Clara Valley.

    Science.gov (United States)

    2010-04-01

    ... 27 Alcohol, Tobacco Products and Firearms 1 2010-04-01 2010-04-01 false Santa Clara Valley. 9.126... Santa Clara Valley. (a) Name. The name of the viticultural area described in this section is “Santa Clara Valley.” (b) Approved Maps. The appropriate maps for determining the boundaries of the...

  17. Ciliate communities consistently associated with coral diseases

    Science.gov (United States)

    Sweet, M. J.; Séré, M. G.

    2016-07-01

    Incidences of coral disease are increasing. Most studies which focus on diseases in these organisms routinely assess variations in bacterial associates. However, other microorganism groups such as viruses, fungi and protozoa are only recently starting to receive attention. This study aimed at assessing the diversity of ciliates associated with coral diseases over a wide geographical range. Here we show that a wide variety of ciliates are associated with all nine coral diseases assessed. Many of these ciliates such as Trochilia petrani and Glauconema trihymene feed on the bacteria which are likely colonizing the bare skeleton exposed by the advancing disease lesion or the necrotic tissue itself. Others such as Pseudokeronopsis and Licnophora macfarlandi are common predators of other protozoans and will be attracted by the increase in other ciliate species to the lesion interface. However, a few ciliate species (namely Varistrombidium kielum, Philaster lucinda, Philaster guamense, a Euplotes sp., a Trachelotractus sp. and a Condylostoma sp.) appear to harbor symbiotic algae, potentially from the coral themselves, a result which may indicate that they play some role in the disease pathology at the very least. Although, from this study alone we are not able to discern what roles any of these ciliates play in disease causation, the consistent presence of such communities with disease lesion interfaces warrants further investigation.

  18. The role of Scgb1a1+ Clara cells in the long-term maintenance and repair of lung airway, but not alveolar, epithelium.

    Science.gov (United States)

    Rawlins, Emma L; Okubo, Tadashi; Xue, Yan; Brass, David M; Auten, Richard L; Hasegawa, Hiroshi; Wang, Fan; Hogan, Brigid L M

    2009-06-05

    To directly test the contribution of Scgb1a1(+) Clara cells to postnatal growth, homeostasis, and repair of lung epithelium, we generated a Scgb1a1-CreER "knockin" mouse for lineage-tracing these cells. Under all conditions tested, the majority of Clara cells in the bronchioles both self-renews and generates ciliated cells. In the trachea, Clara cells give rise to ciliated cells but do not self-renew extensively. Nevertheless, they can contribute to tracheal repair. In the postnatal mouse lung, it has been proposed that bronchioalveolar stem cells (BASCs) which coexpress Scgb1a1 (Secretoglobin1a1) and SftpC (Surfactant Protein C), contribute descendants to both bronchioles and alveoli. The putative BASCs were lineage labeled in our studies. However, we find no evidence for the function of a special BASC population during postnatal growth, adult homeostasis, or repair. Rather, our results support a model in which the trachea, bronchioles, and alveoli are maintained by distinct populations of epithelial progenitor cells.

  19. The Cutaneous Ciliated Cyst in Young Male: The Possibility of Ciliated Cutaneous Eccrine Cyst

    Science.gov (United States)

    Kim, Youngjoon; Kim, Hyunjung

    2015-01-01

    Cutaneous ciliated cyst was described as a painless cyst occurring on the lower limbs of women between the ages of 15 and 30 years. The cysts are typically lined by ciliated cuboidal to columnar epithelium with pseudostratified areas and focal squamous metaplasia is occasionally present. Immunohistochemical studies have demonstrated that the cysts are PR and ER positive, similar to the epithelia of the fallopian tubes. However, outliers of cutaneous ciliated cysts, including those in male patients and in unexpected locations such as the scalp, finger, and scapular area, have been reported. Thus, some hypotheses have been proposed including the Mullerian heterotopias, ciliated metaplasia of eccrine sweat glands, and embryonic remnants of the cloacal membrane. We report a rare case of cutaneous ciliated cyst on the left shoulder of a 7-year-old boy and this is the eighth case of cutaneous ciliated cyst in male patients. Moreover, through reviewing the articles, we try to propose the classification of the cutaneous ciliated cysts into the cutaneous Mullerian cysts and the ciliated cutaneous eccrine cysts. PMID:26491452

  20. The Cutaneous Ciliated Cyst in Young Male: The Possibility of Ciliated Cutaneous Eccrine Cyst

    Directory of Open Access Journals (Sweden)

    Youngjoon Kim

    2015-01-01

    Full Text Available Cutaneous ciliated cyst was described as a painless cyst occurring on the lower limbs of women between the ages of 15 and 30 years. The cysts are typically lined by ciliated cuboidal to columnar epithelium with pseudostratified areas and focal squamous metaplasia is occasionally present. Immunohistochemical studies have demonstrated that the cysts are PR and ER positive, similar to the epithelia of the fallopian tubes. However, outliers of cutaneous ciliated cysts, including those in male patients and in unexpected locations such as the scalp, finger, and scapular area, have been reported. Thus, some hypotheses have been proposed including the Mullerian heterotopias, ciliated metaplasia of eccrine sweat glands, and embryonic remnants of the cloacal membrane. We report a rare case of cutaneous ciliated cyst on the left shoulder of a 7-year-old boy and this is the eighth case of cutaneous ciliated cyst in male patients. Moreover, through reviewing the articles, we try to propose the classification of the cutaneous ciliated cysts into the cutaneous Mullerian cysts and the ciliated cutaneous eccrine cysts.

  1. Imaging features of ciliated hepatic foregut cyst

    Institute of Scientific and Technical Information of China (English)

    Song-Hua Fang; Dan-Jun Dong; Shi-Zheng Zhang

    2005-01-01

    Ciliated hepatic foregut cyst (CHFC) is a very rare cystic lesion of the liver that is histologically similar to bronchogenic cyst. We report one case of CHFC that was hard to distinguish from solid-cystic neoplasm in imaging features. Magnetic resonance imaging was helpful in differentiating these cysts from other lesions.

  2. 77 FR 39726 - Land Acquisitions: Pueblo of Santa Clara

    Science.gov (United States)

    2012-07-05

    ... From the Federal Register Online via the Government Publishing Office DEPARTMENT OF THE INTERIOR Bureau of Indian Affairs Land Acquisitions: Pueblo of Santa Clara AGENCY: Bureau of Indian Affairs... into trust for the Pueblo of Santa Clara on January 27, 2012. FOR FURTHER INFORMATION CONTACT:...

  3. Ultrastructure of the rumen ciliate Dasytricha ruminantium.

    Science.gov (United States)

    Gordon Paul, R; Butler, R D; Williams, A G

    1989-04-14

    The ciliate Dasytricha ruminantium possesses cilia over the entire surface. Both the oral and somatic kineties are composed of monokinetids comprising a kinetosome, a tangential ribbon of 5 transverse microtubules, a weakly convergent bundle of 5 postciliary microtubules, a short kinetodesmal fibre, and a single microtubule homologous to T(2) of other litostomate ciliates [15]. The reversed orientation of the kineties within and around the vestibulum may be a consequence of the evolutionary migration of the vestibulum from the anterior to the posterior of the cell. The vestibulum leads to the cytostome and a cytopharynx of the rhabdos type [3]. Microtubules lining the exit canals of the posterior contractile vacuole and cytoproct are believed to originate from somatic kinetids. The ecto-endoplasmic boundary layer (eeb) is composed of two microfibrillar layers. A large extension of the eeb connects the vestibulum to the cell cortex but does not form a karyophore as seen in the closely related genus Isotricha [12].

  4. Ciliates and the rare biosphere: a review.

    Science.gov (United States)

    Dunthorn, Micah; Stoeck, Thorsten; Clamp, John; Warren, Alan; Mahé, Frédéric

    2014-01-01

    Here we provide a brief review of the rare biosphere from the perspective of ciliates and other microbial eukaryotes. We trace research on rarity from its lack of much in-depth focus in morphological and Sanger sequencing projects, to its central importance in analyses using high throughput sequencing strategies. The problem that the rare biosphere is potentially comprised of mostly errors is then discussed in the light of asking community-comparative, novel-diversity, and ecosystem-functioning questions.

  5. First report of folliculinid ciliates affecting Caribbean scleractinian corals

    Science.gov (United States)

    Cróquer, A.; Bastidas, C.; Lipscomp, D.; Rodríguez-Martínez, R. E.; Jordan-Dahlgren, E.; Guzman, H. M.

    2006-05-01

    This is the first report of a ciliate of the genus Halofolliculina infecting hard coral species of six families (Acroporidae, Agaricidae, Astrocoeniidae, Faviidae, Meandrinidae and Poritidae) and milleporids in the Caribbean. Surveys conducted during 2004 2005 in Venezuela, Panama and México confirmed that this ciliate affects up to 25 scleractinian species. The prevalence of this ciliate at the coral community level was variable across sites, being most commonly found at Los Roques, Venezuela, and at Bocas del Toro, Panama (prevalence 0.2 2.5%), but rarely observed in the Mexican Caribbean. Ciliates were more prevalent within populations of acroporids ( Acropora palmata, Acropora cervicornis and Acropora prolifera) in Los Roques. Recent observations also corroborate the presence of these ciliates in Curacao and Puerto Rico. Our observations indicate that ciliates affecting corals have a wider distribution than previously thought, and are no longer exclusively found in the Indo-Pacific and Red Sea.

  6. Biodiversity patterns of soil ciliates along salinity gradients.

    Science.gov (United States)

    Zhao, Feng; Xu, Kuidong

    2016-04-01

    We evaluated ciliate diversity in saline soils with a salinity range from 6.5 to 65 psu by the morphological method of the Ludox-quantitative protargol stain (QPS) and the molecular techniques of ciliate-specific clone library and denaturing gradient gel electrophoresis. No active ciliates could be detected with the Ludox-QPS method, while high molecular diversity of ciliates was found. The highest ciliate molecular diversity was obtained from the soil at salinity of 8.9 psu, moderate diversity was found at salinity of 6.5 psu, and the diversity sharply decreased at salinity of 50.5 psu. By contrast, the number of ciliate classes clearly decreased with increasing soil salinity: six, five, four and two classes from sites with salinity of 6.5 psu, 8.9 psu, 29.5 psu and 50.5 psu, respectively. Ciliate diversity pattern is different from that of bacteria, whose diversity is also high in extremely saline environments. Meanwhile, the composition of ciliate community was significantly different along salinity gradient. Colpodea and Oligohymenophorea were diverse in soils at salinity less than 29.5 psu, while absent in soils with salinity above 50.5 psu. BIOENV analysis indicated soil salinity and water content were the main factors regulating the distribution of ciliates in saline soils.

  7. A plasma wakefield acceleration experiment using CLARA beam

    CERN Document Server

    Xia, G; Clarke, J; Smith, J; Cormier-Michel, E; Jones, J; Williams, P H; Mckenzie, J W; Militsyn, B L; Hanahoe, K; Mete, O; Aimidula, A; Welsch, C P

    2014-01-01

    We propose a Plasma Accelerator Research Station (PARS) based at proposed FEL test facility CLARA (Compact Linear Accelerator for Research and Applications) at Daresbury Laboratory. The idea is to use the relativistic electron beam from CLARA, to investigate some key issues in electron beam transport and in electron beam driven plasma wakefield acceleration, e.g. high gradient plasma wakefield excitation driven by a relativistic electron bunch, two bunch experiment for CLARA beam energy doubling, high transformer ratio, long bunch self-modulation and some other advanced beam dynamics issues. This paper presents the feasibility studies of electron beam transport to meet the requirements for beam driven wakefield acceleration and presents the plasma wakefield simulation results based on CLARA beam parameters. Other possible experiments which can be conducted at the PARS beam line are also discussed.

  8. Estuarine ecology : A report on Santa Clara County Wetlands

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — This report on the Santa Clara County wetlands was written just prior to the establishment of the San Francisco Bay National Wildlife Refuge. The report summarizes...

  9. The 2 MW Santa Clara Project

    Science.gov (United States)

    Eichenberger, Paul H.

    The City of Santa Clara, CA, USA, has hosted the world's first field demonstration of a molten carbonate fuel cell power plant. This US$46 million, 2 MW generator was a joint effort of five US utilities, the federal government, and two US research organizations. The demonstration used sixteen 125 kW stacks placed in four modules. The balance of plant (BOP) is the equipment that prepares and supplies the fuel to the stacks and converts the d.c. current to a.c. BOP construction started in April 1994, and was completed in June 1995. The BOP configuration allowed testing and development before installation of the four modules. The final full-temperature test was completed in February 1996. The four fuel cell modules were installed and cured, and power delivery began in April 1996. The plant operated for approximately 720 h at design output before electrical anomalies occurred and the plant was shut down for repairs. The plant restarted in August, but it soon became obvious that other problems had been caused by the electrical anomalies. The plant shut down and was reconfigured to a 1 MW plant. The restarted plant was ramped to 1 MW, but additional problems began to occur and the plant demonstration ended. The plant produced 2500 MWh, and operated at 1000°F, or higher, for over 5290 h. The plant set operational records, and demonstrated multistack, automatic control, and stable-field operation. Power quality met all standards with no measurable NOx or SOx output. The plant isolated itself from the grid during two major California, USA grid outages. The plant also experienced a shutdown of the automatic control system, and placed itself on hot standby using the mechanical field systems. The plant then restarted without incident.

  10. Reality-and-Desire in Ciliates

    Science.gov (United States)

    Brijder, Robert; Hoogeboom, Hendrik Jan

    The theory of gene assembly in ciliates has a number of similarities with the theory of sorting by reversal. Both theories model processes that are based on splicing, and have a fixed begin and end product. The main difference is the type of splicing operations used to obtain the end product from the begin product. In this overview paper, we show how the concept of breakpoint graph, known from the theory of sorting by reversal, can be used in the theory of gene assembly. Our aim is to present the material in an intuitive and informal manner to allow for an efficient introduction into the subject.

  11. Population dynamics of active and total ciliate populations in arable soil amended with wheat

    DEFF Research Database (Denmark)

    Ekelund, F.; Frederiksen, Helle B.; Ronn, R.

    2002-01-01

    of ciliate growth, the population of cystic ciliates increased 100-fold. We suggest that internal population regulation is the major factor governing ciliate encystment and that the rate of encystment depends on ciliate density. This model provides a quantitative explanation of ciliatostasis and can explain...

  12. SPECIES COMPOSITION OF PSAMMOPHILIC CILIATES OF SUMGAIT CASPIAN COAST

    Directory of Open Access Journals (Sweden)

    I. Kh. Alekperov

    2014-01-01

    Full Text Available Abstract. Comparative data on the species composition and species saprobic indicators of the psammon ciliates from Sumgait coast of the Caspian Sea are given.Methods. “Alive” samples were collected using a small clean plastic wide mouth bottles. Further processing was carried out under laboratory conditions. Small quantities of soil were examined under a binocular microscope MBS-9 . Ciliates detected microvessel caught and fixed castors for further impregnation kinetoma silver nitrate (Chatton et Lwoff, 1930 or silver proteinate. To determine the keys for ciliates used Foyssner’s major publications (Foissner et al., 1991, 1992, 1999 and “Free-living ciliates Atlas” (Alekperov, 2005.Results. We observed 75 species of ciliates during the studies, which species composition and distribution of the collection points are shown in table 1. Diagrams with average data were made relations groups psammophilous ciliates indicators saprobity different zones for each of the sites investigated Sumgait coast.Main conclusions. Environmental analysis using benthic ciliates indicators saprobity different zones showed that as expected, the industrial zone of Sumgayit coast coast, despite the decline in recent years, the total amount of pollution that is still highly contaminated portion of the coastal zone of the Caspian Sea.

  13. En el Cincuentenario del Hospital Santa Clara

    Directory of Open Access Journals (Sweden)

    Gilberto Rueda Pérez

    1992-12-01

    Full Text Available

    El 16 de julio de 1942 nace el Hospital Sanatorio Antituberculoso Santa Clara en Santafé de Bogotá.
    Un siglo atrás, casi a la fecha, en 1843, nace en Alemania Roberto Koch, quien, 60 años antes de la fundación del Hospital, el 24 de marzo de 1882, presenta al mundo el descubrimiento del Micobacterium Tuberculosis, germen causante de la enfermedad que ataca alhombre desde sus más remotos orígenes y que aún nos acompaña, especialmente en los países subdesarrollados, causando severo impacto en la salud de las poblaciones más necesitadas, apesar de los grandes avances alcanzados en el campo de la Medicina a nivel mundial.
    Por haber sido destinado el Hospital altratamiento de los tuberculosos, destino que aún conserva primordialmente aunque, como se verá posteriormente, sus camas reciben enfermos de medicina general dada la evolución de los tratamientos y la modernización de los esquemas terapéuticos, se justifica ampliamente mencionar aquí los principales avances relacionados con el control de la Tuberculosis a través de los tiempos hasta la fundación del Hospital.

    Estos se pueden resumir así:

    • 'HIPOCRATES (460-377 a. C.:describe la consunción y la llama tisis; lanza el concepto de herencia que perdura por siglos.
    • ARISTOTELES(324-284a. C.:habla del contagio a través de la respiración.
    • CELSO (siglo I a. C.: describe el tubérculo y señala tres formas de consunción: atrofia, caquexia y tisis.
    • GALENO(181-261 d. C.: la agrupa con otras enfermedades transmisibles: la peste, la sarna, etc.
    • EDADMEDIA(sigloVII alXIIId. C.:se destaca únicamente como aporte nuevo Maimonides, filósofo judío radicado en Granada (11351204,quien describe la tisis de los animales.

    Posteriormente Girolamo Fracastoro (1478-1553, nacido en Verona,la asimila a la viruela y lanza la teoría microbiana.

    • PARACELSO(1493-1541pregona que: los

    • Plasma wakefield acceleration at CLARA facility in Daresbury Laboratory

      Energy Technology Data Exchange (ETDEWEB)

      Xia, G., E-mail: guoxing.xia@manchester.ac.uk [School of Physics and Astronomy, University of Manchester, Manchester (United Kingdom); The Cockcroft Institute, Sci-Tech Daresbury, Daresbury, Warrington (United Kingdom); Nie, Y. [Deutsche Elektronen-Synchrotron DESY, Hamburg (Germany); Mete, O.; Hanahoe, K. [School of Physics and Astronomy, University of Manchester, Manchester (United Kingdom); The Cockcroft Institute, Sci-Tech Daresbury, Daresbury, Warrington (United Kingdom); Dover, M.; Wigram, M.; Wright, J.; Zhang, J. [School of Physics and Astronomy, University of Manchester, Manchester (United Kingdom); Smith, J. [Tech-X UK Corporation, Daresbury Innovation Centre, Warrington (United Kingdom); Pacey, T.; Li, Y. [School of Physics and Astronomy, University of Manchester, Manchester (United Kingdom); The Cockcroft Institute, Sci-Tech Daresbury, Daresbury, Warrington (United Kingdom); Wei, Y.; Welsch, C. [The Cockcroft Institute, Sci-Tech Daresbury, Daresbury, Warrington (United Kingdom); University of Liverpool, Liverpool (United Kingdom)

      2016-09-01

      A plasma accelerator research station (PARS) has been proposed to study the key issues in electron driven plasma wakefield acceleration at CLARA facility in Daresbury Laboratory. In this paper, the quasi-nonlinear regime of beam driven plasma wakefield acceleration is analysed. The wakefield excited by various CLARA beam settings are simulated by using a 2D particle-in-cell (PIC) code. For a single drive beam, an accelerating gradient up to 3 GV/m can be achieved. For a two bunch acceleration scenario, simulation shows that a witness bunch can achieve a significant energy gain in a 10–50 cm long plasma cell.

    • Studies on experimental culture of a marine ciliate Fabrea salina

      Digital Repository Service at National Institute of Oceanography (India)

      Rattan, R.; Ansari, Z.A.; Chatterji, A.

      Studies were conducted on the culture of a marine ciliate, Fabrea salina in the laboratory condition. Three types of inert feed; commercial yeast, fermented wheat bran and fermented rise bran were tested to study their suitability as artificial feed...

    • 78 FR 67210 - Santa Clara Pueblo Disaster #NM-00038

      Science.gov (United States)

      2013-11-08

      ... ADMINISTRATION Santa Clara Pueblo Disaster NM-00038 AGENCY: U.S. Small Business Administration. ACTION: Notice...: Submit completed loan applications to: U.S. Small Business Administration, Processing and Disbursement... of Disaster Assistance, U.S. Small Business Administration, 409 3rd Street, SW., Suite...

    • ["The piano trio" Robert Schumann, Clara Schumann and Johannes Brahms].

      Science.gov (United States)

      Albretsen, C S

      1998-12-10

      The relationship between the pianist and composer Clara Schumann and the composers Robert Schumann and Johannes Brahms has for a century been an interesting topic. Clara and Robert Schumann both suffered separation from their mothers during early childhood. Johannes Brahms was intensely spoiled by his mother. Robert Schumann needed a structuring wife in his adult life, while Johannes Brahms turned to be afraid of intrusive women. Robert Schumann's psychotic breakdown in February 1854 had a complex background: a hypomanic state, some marital problems, a stressful journey with musical appearances, and possibly a difficulty in differentiating between himself and his new friend Johannes Brahms. As for Clara Schumann, who lost her mother before the age of five, musical activities became her way of overcoming the difficulties of life. She was able to support Robert in his lunatic asylum and their seven children growing up in three separate towns. The chronic diseases of the sons: schizophrenia, polyarthritis and tuberculosis made a deep impression on her and her fingers and hands were periodically immobilised with severe pain. For four decades Johannes was her able "son" and Clara was his "mother", at a safe distance.

    • Impact of Soil Texture on Soil Ciliate Communities

      Science.gov (United States)

      Chau, J. F.; Brown, S.; Habtom, E.; Brinson, F.; Epps, M.; Scott, R.

      2014-12-01

      Soil water content and connectivity strongly influence microbial activities in soil, controlling access to nutrients and electron acceptors, and mediating interactions between microbes within and between trophic levels. These interactions occur at or below the pore scale, and are influenced by soil texture and structure, which determine the microscale architecture of soil pores. Soil protozoa are relatively understudied, especially given the strong control they exert on bacterial communities through predation. Here, ciliate communities in soils of contrasting textures were investigated. Two ciliate-specific primer sets targeting the 18S rRNA gene were used to amplify DNA extracted from eight soil samples collected from Sumter National Forest in western South Carolina. Primer sets 121F-384F-1147R (semi-nested) and 315F-959R were used to amplify soil ciliate DNA via polymerase chain reaction (PCR), and the resulting PCR products were analyzed by gel electrophoresis to obtain quantity and band size. Approximately two hundred ciliate 18S rRNA sequences were obtained were obtained from each of two contrasting soils. Sequences were aligned against the NCBI GenBank database for identification, and the taxonomic classification of best-matched sequences was determined. The ultimate goal of the work is to quantify changes in the ciliate community under short-timescale changes in hydrologic conditions for varying soil textures, elucidating dynamic responses to desiccation stress in major soil ciliate taxa.

    • 78 FR 66756 - Santa Clara Pueblo; Amendment No. 1 to Notice of a Major Disaster Declaration

      Science.gov (United States)

      2013-11-06

      ... SECURITY Federal Emergency Management Agency Santa Clara Pueblo; Amendment No. 1 to Notice of a Major... amends the notice of a major disaster declaration for the Santa Clara Pueblo (FEMA-4147-DR), dated... disaster declaration for the Santa Clara Pueblo is hereby amended to include Public Assistance...

    • 78 FR 64233 - Santa Clara Pueblo; Major Disaster and Related Determinations

      Science.gov (United States)

      2013-10-28

      ... SECURITY Federal Emergency Management Agency Santa Clara Pueblo; Major Disaster and Related Determinations... Presidential declaration of a major disaster for the Santa Clara Pueblo (FEMA-4147-DR), dated September 27... Santa Clara Pueblo resulting from severe storms and flooding during the period of July 19-21, 2013,...

  1. 76 FR 9640 - Prevailing Rate Systems: Santa Clara, CA, Tulsa County, OK, and Angelina County, TX

    Science.gov (United States)

    2011-02-22

    ..., ``Santa Clara,'' which was abolished as a NAF FWS wage area by a final rule (74 FR 9951) published on... MANAGEMENT 5 CFR Part 532 RIN 3206-AM22 Prevailing Rate Systems: Santa Clara, CA, Tulsa County, OK, and... of California by removing the entry for ``Santa Clara.'' 0 3. Appendix D to subpart B is amended...

  2. The lung enriched transcription factor TTF-1 and the ubiquitously expressed proteins Sp1 and Sp3 interact with elements located in the minimal promoter of the rat Clara cell secretory protein gene.

    Science.gov (United States)

    Toonen, R F; Gowan, S; Bingle, C D

    1996-01-01

    The mechanisms that direct expression of the Clara cell secretory protein (CCSP) gene to the bronchiolar epithelial cells of the lung remain to be elucidated. Previous studies have identified a number of proteins which bind to a functionally important region (Region 1) located -132 to -76 bp from the transcription start site in the rat CCSP gene. Subsequently we have shown that while Region 1 is an important positive regulator of CCSP gene expression, sequences 3' of this region (-75 to +38) are sufficient to confer tissue-specific expression of a reporter gene. In the present study we have used transient transfections with a deletion series of CCSP-CAT reporter plasmids (where CAT is chloramphenicol acetyltransferase) and gel mobility shift assays with a series of overlapping oligonucleotides covering the whole minimal promoter region to study protein-DNA interactions within this region. These studies have identified a conserved functional binding site for the lung and thyroid enriched homeodomain transcription factor TTF-1, located between positions -51 and -42 from the transcription start site. CCSP-CAT chimaeric reporters containing this region are specifically activated by TTF-1 in co-transfection assays, and nuclear extracts from cells which express TTF-1 bind to this region, as does in vitro translated rat TTF-1. Three additional conserved regions were identified, and in further gel mobility shift studies with an oligonucleotide spanning the conserved region immediately 5' to the TTF-1 site we identified a binding site for the ubiquitously expressed zinc-finger-containing proteins Sp1 and Sp3. These studies suggest that cell-type-restricted and ubiquitous nuclear proteins may play a combined role in the regulation of the CCSP gene within the bronchiolar epithelium by interacting with the minimal promoter region. PMID:8687389

  3. The role of ciliate protozoa in the rumen

    Directory of Open Access Journals (Sweden)

    Charles James Newbold

    2015-11-01

    Full Text Available First described in 1843, Rumen protozoa with their striking appearance were assumed to be important for the welfare of their host. However, despite contributing up to 50% of the bio-mass in the rumen, the role of protozoa in rumen microbial ecosystem remains unclear.Phylogenetic analysis of 18S rDNA libraries generated from the rumen of cattle, sheep, and goats has revealed an unexpected diversity of ciliated protozoa although variation in gene copy number between species makes it difficult to obtain absolute quantification. Despite repeated attempts it has proven impossible to maintain rumen protozoa in axenic culture. Thus it has been difficult to establish conclusively a role of ciliate protozoa in rumen fibre degradation. The development of techniques to clone and express ciliate genes in  phage, together with bioinformatic indices to confirm the ciliate origin of the genes has allowed the isolation and characterisation of fibrolytic genes from rumen protozoa. Elimination of the ciliate protozoa increases microbial protein supply by up to 30% and reduces methane production by up to 11%. Our recent findings suggest that holotrich protozoa play a disproportionate role in supporting methanogenesis whilst the small entodiniium are responsible for much of the bacterial protein turnover. As yet no method to control protozoa in the rumen that is safe and practically applicable has been developed, however a range of plant extract capable of controlling if not completely eliminating rumen protozoa have been described.

  4. The Role of Ciliate Protozoa in the Rumen.

    Science.gov (United States)

    Newbold, Charles J; de la Fuente, Gabriel; Belanche, Alejandro; Ramos-Morales, Eva; McEwan, Neil R

    2015-01-01

    First described in 1843, Rumen protozoa with their striking appearance were assumed to be important for the welfare of their host. However, despite contributing up to 50% of the bio-mass in the rumen, the role of protozoa in rumen microbial ecosystem remains unclear. Phylogenetic analysis of 18S rDNA libraries generated from the rumen of cattle, sheep, and goats has revealed an unexpected diversity of ciliated protozoa although variation in gene copy number between species makes it difficult to obtain absolute quantification. Despite repeated attempts it has proven impossible to maintain rumen protozoa in axenic culture. Thus it has been difficult to establish conclusively a role of ciliate protozoa in rumen fiber degradation. The development of techniques to clone and express ciliate genes in λ phage, together with bioinformatic indices to confirm the ciliate origin of the genes has allowed the isolation and characterization of fibrolytic genes from rumen protozoa. Elimination of the ciliate protozoa increases microbial protein supply by up to 30% and reduces methane production by up to 11%. Our recent findings suggest that holotrich protozoa play a disproportionate role in supporting methanogenesis whilst the small Entodinium are responsible for much of the bacterial protein turnover. As yet no method to control protozoa in the rumen that is safe and practically applicable has been developed, however a range of plant extract capable of controlling if not completely eliminating rumen protozoa have been described.

  5. Colonization dynamics of ciliate morphotypes modified by shifting sandy sediments.

    Science.gov (United States)

    Risse-Buhl, Ute; Felsmann, Katja; Mutz, Michael

    2014-08-01

    Sandy stream-bed sediments colonized by a diverse ciliate community are subject to various disturbance regimes. In microcosms, we investigated the effect of sediment shifting on the colonization dynamics of 3 ciliate morphotypes differing in morphology, behavior and feeding strategy. The dynamics of the ciliate morphotypes inhabiting sediment pore water and overlying water were observed at 3 sediment shifting frequencies: (1) stable sediments, (2) periodically shifting sediments such as migrating ripples, and (3) continuously shifting sediments as occurring during scour events of the uppermost sediment. Sediment shifting significantly affected the abundance and growth rate of the ciliate morphotypes. The free-swimming filter feeder Dexiostoma campylum was vulnerable to washout by sediment shifting since significantly higher numbers occurred in the overlying water than in pore water. Abundance of D. campylum only increased in pore water of stable sediments. On the contrary, the vagile grasper feeder Chilodonella uncinata and the sessile filter feeder Vorticella convallaria had positive growth rates and successfully colonized sediments that shifted periodically and continuously. Thus, the spatio-temporal pattern of sediment dynamics acts as an essential factor of impact on the structure, distribution and function of ciliate communities in sand-bed streams.

  6. Evaluation of lugol solution used for counting rumen ciliates

    Directory of Open Access Journals (Sweden)

    Marta D'Agosto

    1999-01-01

    Full Text Available The present study proposes a modification of the technique described by PURSER & MOIR (1959 for the quantitative evaluation of rumen ciliate based on an adaptation described by DEHORITY (I984. The modifying process includes: the replacement of two drops of brilliant green dye, for at least four hours, by three drops of lugol solution, for at least 15 minutes. It was made a comparative evaluation of these stainings. It was concluded that lugol solution can replace the brilliant green dye showing the following advantages: staining time reduction and subsequent speeding of sample processing; evidence of skeletal plates of entodiniomorphs making its identification easier; improved observation of small ciliates and inconspicuous structures; improved total counting and generic identification of the ciliates.

  7. Carbon isotope geochemistry of the Santa Clara River

    OpenAIRE

    2001-01-01

    The Santa Clara River is a prototypical small mountainous river, with a headwater height greater than 1000 m and a basin area smaller than 10,000 m 2. Although individual small mountainous rivers export trivial amounts of sediment and carbon to the ocean, as a group these rivers may export a major fraction (as much as 50%) of the total global river sediment flux [Milliman and Syvitski, 1992], making their geochemistry relevant the study of the ocean's carbon cycle. In addition, many small riv...

  8. Clara E. Lida. Caleidoscopio del exilio. Actores, memoria, identidades

    Directory of Open Access Journals (Sweden)

    Rose Duroux

    2010-07-01

    Full Text Available Desde mediados de la década de 1980 he publicado y disertado sobre el exilio español en México en diversos foros académicos. Ello me ha permitido explorar distintas facetas vinculadas con el tema y recibir comentarios y sugerencias valiosas. De alguna manera, con la suma de todas estas miradas se construyeron los fragmentos que, como en los giros de un caleidoscopio, combinan reflexiones e imágenes a la vez complementarias y nuevas.Clara E. Lida Soixante-dix ans après la fin de la Guerre d’Es...

  9. Spectroscopic studies with the PRISMA-CLARA set-up

    Energy Technology Data Exchange (ETDEWEB)

    Fioretto, E; Corradi, L; Angelis, G de; Napoli, D R; Sahin, E; Silvestri, R; Stefanini, A M; Valiente-Dobon, J J [INFN - Laboratori Nazionali di Legnaro, Viale dell' Universita 2, Legnaro (PD), I-35020 (Italy); Bazzacco, D; Beghini, S; Farnea, E; Lenzi, S M; Lunardi, S; Mason, P; Mengoni, D; Montagnoli, G; Scarlassara, F; Ur, C A [Dipartimento di Fisica dell' Universita di Padova and INFN, Via Marzolo 8, Padova, I-35131 (Italy); Gadea, A [Instituto de Fisica Corpuscolar, CSIC-Universidad de Valencia, Valencia, E-46071 (Spain); Pollarolo, G, E-mail: enrico.fioretto@lnl.infn.i [Dipartimento di Fisica Teorica dell' Universita di Torino and INFN, Via P. Giuria 1, Torino, I-10125 (Italy)

    2010-01-01

    The large solid angle magnetic spectrometer for heavy ions PRISMA, installed at Laboratori Nazionali di Legnaro (LNL), was operated up to the end of March 2008 in conjunction with the highly efficient CLARA set-up. It allowed to carry out nuclear structure and reaction mechanism studies in several mass regions of the nuclide chart. Results obtained in the vicinity of the island of inversion and for the heavy iron and chromium isotopes are presented in this contribution. The status of the new focal plane detectors specifically designed for light ions and slow moving heavy ions is also reported.

  10. An approach to measure ciliate grazing on living heterotrophic nanoflagellates

    DEFF Research Database (Denmark)

    Christoffersen, K.; González, J. M.

    2003-01-01

    . Here we present an approach for the assessment of ciliate grazing on living heterotrophic nanoflagellates. Stationary phase cultures of a heterotrophic nanoflagellate (Cafeteria sp.) were live-stained by allowing them to take up fluorescently labelled macromolecules. Controls revealed that this label...

  11. Transposon domestication versus mutualism in ciliate genome rearrangements.

    Directory of Open Access Journals (Sweden)

    Alexander Vogt

    Full Text Available Ciliated protists rearrange their genomes dramatically during nuclear development via chromosome fragmentation and DNA deletion to produce a trimmer and highly reorganized somatic genome. The deleted portion of the genome includes potentially active transposons or transposon-like sequences that reside in the germline. Three independent studies recently showed that transposase proteins of the DDE/DDD superfamily are indispensible for DNA processing in three distantly related ciliates. In the spirotrich Oxytricha trifallax, high copy-number germline-limited transposons mediate their own excision from the somatic genome but also contribute to programmed genome rearrangement through a remarkable transposon mutualism with the host. By contrast, the genomes of two oligohymenophorean ciliates, Tetrahymena thermophila and Paramecium tetraurelia, encode homologous PiggyBac-like transposases as single-copy genes in both their germline and somatic genomes. These domesticated transposases are essential for deletion of thousands of different internal sequences in these species. This review contrasts the events underlying somatic genome reduction in three different ciliates and considers their evolutionary origins and the relationships among their distinct mechanisms for genome remodeling.

  12. Ultrastructural immunohistochemical localization of Clara cell secretory protein in pulmonary epithelium of rabbits.

    OpenAIRE

    Patton, S E; Gupta, R. P.; Nishio, S.; Eddy, E M; Jetten, A. M.; Plopper, C. G.; Nettesheim, P; Hook, G E

    1991-01-01

    Highly purified Clara cells (93 +/- 3%) isolated from the lungs of rabbits were used to produce an antiserum against Clara cell secretory proteins. This antiserum was used to identify and study the biosynthesis and secretion of [35S]methionine-labeled proteins from isolated Clara cells. The antiserum recognized one major secretory protein with apparent molecular weight of 6 kDa and reacted weakly with a higher molecular weight protein of about 180 kDa. Biosynthesis and secretion of these prot...

  13. Documentation of the Santa Clara Valley regional ground-water/surface-water flow model, Santa Clara Valley, California

    Science.gov (United States)

    Hanson, R.T.; Li, Zhen; Faunt, C.C.

    2004-01-01

    The Santa Clara Valley is a long, narrow trough extending about 35 miles southeast from the southern end of San Francisco Bay where the regional alluvial-aquifer system has been a major source of water. Intensive agricultural and urban development throughout the 20th century and related ground-water development resulted in ground-water-level declines of more than 200 feet and land subsidence of as much as 12.7 feet between the early 1900s and the mid-1960s. Since the 1960s, Santa Clara Valley Water District has imported surface water to meet growing demands and reduce dependence on ground-water supplies. This importation of water has resulted in a sustained recovery of the ground-water flow system. To help support effective management of the ground-water resources, a regional ground-water/surface-water flow model was developed. This model simulates the flow of ground water and surface water, changes in ground-water storage, and related effects such as land subsidence. A numerical ground-water/surface-water flow model of the Santa Clara Valley subbasin of the Santa Clara Valley was developed as part of a cooperative investigation with the Santa Clara Valley Water District. The model better defines the geohydrologic framework of the regional flow system and better delineates the supply and demand components that affect the inflows to and outflows from the regional ground-water flow system. Development of the model includes revisions to the previous ground-water flow model that upgraded the temporal and spatial discretization, added source-specific inflows and outflows, simulated additional flow features such as land subsidence and multi-aquifer wellbore flow, and extended the period of simulation through September 1999. The transient-state model was calibrated to historical surface-water and ground-water data for the period 197099 and to historical subsidence for the period 198399. The regional ground-water flow system consists of multiple aquifers that are grouped

  14. Hydrogeologic framework of the Santa Clara Valley, California

    Science.gov (United States)

    Hanson, Randall T.

    2015-01-01

    The hydrologic framework of the Santa Clara Valley in northern California was redefined on the basis of new data and a new hydrologic model. The regional groundwater flow systems can be subdivided into upper-aquifer and lower-aquifer systems that form a convergent flow system within a basin bounded by mountains and hills on three sides and discharge to pumping wells and the southern San Francisco Bay. Faults also control the flow of groundwater within the Santa Clara Valley and subdivide the aquifer system into three subregions.After decades of development and groundwater depletion that resulted in substantial land subsidence, Santa Clara Valley Water District (SCVWD) and the local water purveyors have refilled the basin through conservation and importation of water for direct use and artificial recharge. The natural flow system has been altered by extensive development with flow paths toward major well fields. Climate has not only affected the cycles of sedimentation during the glacial periods over the past million years, but interannual to interdecadal climate cycles also have affected the supply and demand components of the natural and anthropogenic inflows and outflows of water in the valley. Streamflow has been affected by development of the aquifer system and regulated flow from reservoirs, as well as conjunctive use of groundwater and surface water. Interaquifer flow through water-supply wells screened across multiple aquifers is an important component to the flow of groundwater and recapture of artificial recharge in the Santa Clara Valley. Wellbore flow and depth-dependent chemical and isotopic data indicate that flow into wells from multiple aquifers, as well as capture of artificial recharge by pumping of water-supply wells, predominantly is occurring in the upper 500 ft (152 m) of the aquifer system. Artificial recharge represents about one-half of the inflow of water into the valley for the period 1970–1999. Most subsidence is occurring below 250 ft

  15. Groundwater quality in the Santa Clara River Valley, California

    Science.gov (United States)

    Burton, Carmen A.; Landon, Matthew K.; Belitz, Kenneth

    2011-01-01

    The Santa Clara River Valley (SCRV) study unit is located in Los Angeles and Ventura Counties, California, and is bounded by the Santa Monica, San Gabriel, Topatopa, and Santa Ynez Mountains, and the Pacific Ocean. The 460-square-mile study unit includes eight groundwater basins: Ojai Valley, Upper Ojai Valley, Ventura River Valley, Santa Clara River Valley, Pleasant Valley, Arroyo Santa Rosa Valley, Las Posas Valley, and Simi Valley (California Department of Water Resources, 2003; Montrella and Belitz, 2009). The SCRV study unit has hot, dry summers and cool, moist winters. Average annual rainfall ranges from 12 to 28 inches. The study unit is drained by the Ventura and Santa Clara Rivers, and Calleguas Creek. The primary aquifer system in the Ventura River Valley, Ojai Valley, Upper Ojai Valley, and Simi Valley basins is largely unconfined alluvium. The primary aquifer system in the remaining groundwater basins mainly consists of unconfined sands and gravels in the upper portion and partially confined marine and nonmarine deposits in the lower portion. The primary aquifer system in the SCRV study unit is defined as those parts of the aquifers corresponding to the perforated intervals of wells listed in the California Department of Public Health (CDPH) database. Public-supply wells typically are completed in the primary aquifer system to depths of 200 to 1,100 feet below land surface (bls). The wells contain solid casing reaching from the land surface to a depth of about 60-700 feet, and are perforated below the solid casing to allow water into the well. Water quality in the primary aquifer system may differ from the water in the shallower and deeper parts of the aquifer. Land use in the study unit is approximately 40 percent (%) natural (primarily shrubs, grassland, and wetlands), 37% agricultural, and 23% urban. The primary crops are citrus, avocados, alfalfa, pasture, strawberries, and dry beans. The largest urban areas in the study unit are the cities of

  16. 78 FR 67382 - Santa Clara Pueblo; Major Disaster and Related Determinations

    Science.gov (United States)

    2013-11-12

    ... SECURITY Federal Emergency Management Agency Santa Clara Pueblo; Major Disaster and Related Determinations... Presidential declaration of a major disaster for the Santa Clara Pueblo (FEMA-4151-DR), dated October 24, 2013... Act''), as follows: I have determined that the damage to the lands associated with the Santa...

  17. Tar Creek study, Sargent oil field, Santa Clara County, California

    Science.gov (United States)

    Wagner, David L.; Fedasko, Bill; Carnahan, J.R.; Brunetti, Ross; Magoon, Leslie B.; Lillis, Paul G.; Lorenson, T.D.; Stanley, Richard G.

    2002-01-01

    Field work in the Tar Creek area of Sargent oil field was performed June 26 to 28, 2000. The Santa Clara County study area is located in Sections, 30, 31, and 32, Township 11 South, Range 4 East, M.D.B&M; and in Sections 25 and 36, Township 11 South, Range 3 East, M.D.B.&M., north and south of Tar Creek, west of Highway 101. The work was a cooperative effort of the California Department of Conservation's Division of Oil, Gas, and Geothermal Resources (DOGGR), California Geological Survey (CGS), and the United States Geological Survey (USGS). The purpose of the project was to map the stratigraphy and geologic structure (David Wagner, CGS); sample oil for age dating (Les Magoon, USGS); and search for undocumented wells plus conduct a GPS survey of the area (Bill Fedasko, J.P. Carnahan, and Ross Brunetti, DOGGR)

  18. On computational properties of gene assembly in ciliates

    Directory of Open Access Journals (Sweden)

    Vladimir Rogojin

    2010-11-01

    Full Text Available Gene assembly in stichotrichous ciliates happening during sexual reproduction is one of the most involved DNA manipulation processes occurring in biology. This biological process is of high interest from the computational and mathematical points of view due to its close analogy with such concepts and notions in theoretical computer science as permutation and linked list sorting and string rewriting. Studies on computational properties of gene assembly in ciliates represent a good example of interdisciplinary research contributing to both computer science and biology. We review here a number of general results related both to the development of different computational methods enhancing our understanding on the nature of gene assembly, as well as to the development of new biologically motivated computational and mathematical models and paradigms. Those paradigms contribute in particular to combinatorics, formal languages and computability theories.

  19. Ultrastructure of extrusomes in hypotrichous ciliate Pseudourostyla nova

    Institute of Scientific and Technical Information of China (English)

    ZHOU Yao; WANG Zhengjun; ZHANG Jun; GU Fukang

    2011-01-01

    The ultrastructure of extrusomes of the hypotrichous ciliate Pseudourostyla nova was observed in scanning and transmission electron microscopy and enzyme-cytochemistry. The results show that the distribution, morphological characteristics, morphogenesis process, and extrusive process of the extrusomes in P. nova are different from the trichocysts in Paramecium, suggesting that the extrusomes of P. nova can respond to environmental stimuli, play an important role in the defense of this species, and cannot be regarded as "trichocysts". The results also suggest that the extrusomes might be originated from the Golgi apparatus and mature in the cytoplasm; after the extrusion of mature extrusomes, the residual substance might be reabsorbed and reused by the ciliate cell via food vacuoles, and take part in material recycling of the cell.

  20. Phylogeny of intestinal ciliates, including Charonina ventriculi, and comparison of microscopy and 18S rRNA gene pyrosequencing for rumen ciliate community structure analysis.

    Science.gov (United States)

    Kittelmann, Sandra; Devente, Savannah R; Kirk, Michelle R; Seedorf, Henning; Dehority, Burk A; Janssen, Peter H

    2015-04-01

    The development of high-throughput methods, such as the construction of 18S rRNA gene clone or pyrosequencing libraries, has allowed evaluation of ciliate community composition in hundreds of samples from the rumen and other intestinal habitats. However, several genera of mammalian intestinal ciliates have been described based only on morphological features and, to date, have not been identified using molecular methods. Here, we isolated single cells of one of the smallest but widely distributed intestinal ciliates, Charonina ventriculi, and sequenced its 18S rRNA gene. We verified the sequence in a full-cycle rRNA approach using fluorescence in situ hybridization and thereby assigned an 18S rRNA gene sequence to this species previously known only by its morphology. Based on its full-length 18S rRNA gene sequence, Charonina ventriculi was positioned within the phylogeny of intestinal ciliates in the subclass Trichostomatia. The taxonomic framework derived from this phylogeny was used for taxonomic assignment of trichostome ciliate 18S rRNA gene sequence data stemming from high-throughput amplicon pyrosequencing of rumen-derived DNA samples. The 18S rRNA gene-based ciliate community structure was compared to that obtained from microscopic counts using the same samples. Both methods allowed identification of dominant members of the ciliate communities and classification of the rumen ciliate community into one of the types first described by Eadie in 1962. Notably, each method is associated with advantages and disadvantages. Microscopy is a highly accurate method for evaluation of total numbers or relative abundances of different ciliate genera in a sample, while 18S rRNA gene pyrosequencing represents a valuable alternative for comparison of ciliate community structure in a large number of samples from different animals or treatment groups.

  1. Harmful Ciliates and Dominant Genus in Culture Ponds of Young Abalone

    Institute of Scientific and Technical Information of China (English)

    黄建荣; 徐润林; 廖家遗

    2004-01-01

    By using the methods of qualitative and quantitative analysis, the species composition and dominant genus of harmful, ciliates in young abalone culture ponds are studied. Totally 68 species of ciliates, belonging to 3 classes, 16 orders and 46 genus, are found. The dominant ciliate species are Aspidisca leptaspis, Vorticella sp. and Euplotes rariseta. During the young abalone cultivation, the numbers of young abalones increase first,and then show a trend of decreasing. The relationship between the density and composition of ciliates and the density of algae in the young abalone culture ponds is also discussed.

  2. 76 FR 72972 - Notice of Realty Action: Competitive Sale of Public Land in Santa Clara County, CA

    Science.gov (United States)

    2011-11-28

    ... Bureau of Land Management Notice of Realty Action: Competitive Sale of Public Land in Santa Clara County... approximately 23.42 acres, more or less, in Santa Clara County, California. The public land would be sold for... described contains 23.42 acres, more or less, in Santa Clara County, California. Appraised fair market...

  3. 76 FR 16812 - Notice of Realty Action: Modified Competitive Bid Sale of Public Land in Santa Clara County, CA

    Science.gov (United States)

    2011-03-25

    ... Notice of Realty Action: Modified Competitive Bid Sale of Public Land in Santa Clara County, CA AGENCY... approximately 9.27 acres in Santa Clara County, California, for not less than the appraised fair market value of..., more or less, in Santa Clara County. The public land was originally identified as suitable for...

  4. 75 FR 8106 - Don Edwards San Francisco Bay National Wildlife Refuge, Alameda, Santa Clara, and San Mateo...

    Science.gov (United States)

    2010-02-23

    ... Fish and Wildlife Service Don Edwards San Francisco Bay National Wildlife Refuge, Alameda, Santa Clara... located in Alameda, Santa Clara, and San Mateo Counties of California. We provide this notice in... in Alameda, Santa Clara, and San Mateo Counties of California, consists of several non...

  5. Prevalent ciliate symbiosis on copepods: high genetic diversity and wide distribution detected using small subunit ribosomal RNA gene.

    Science.gov (United States)

    Guo, Zhiling; Liu, Sheng; Hu, Simin; Li, Tao; Huang, Yousong; Liu, Guangxing; Zhang, Huan; Lin, Senjie

    2012-01-01

    Toward understanding the genetic diversity and distribution of copepod-associated symbiotic ciliates and the evolutionary relationships with their hosts in the marine environment, we developed a small subunit ribosomal RNA gene (18S rDNA)-based molecular method and investigated the genetic diversity and genotype distribution of the symbiotic ciliates on copepods. Of the 10 copepod species representing six families collected from six locations of Pacific and Atlantic Oceans, 9 were found to harbor ciliate symbionts. Phylogenetic analysis of the 391 ciliate 18S rDNA sequences obtained revealed seven groups (ribogroups), six (containing 99% of all the sequences) belonging to subclass Apostomatida, the other clustered with peritrich ciliate Vorticella gracilis. Among the Apostomatida groups, Group III were essentially identical to Vampyrophrya pelagica, and the other five groups represented the undocumented ciliates that were close to Vampyrophrya/Gymnodinioides/Hyalophysa. Group VI ciliates were found in all copepod species but one (Calanus sinicus), and were most abundant among all ciliate sequences obtained, indicating that they are the dominant symbiotic ciliates universally associated with copepods. In contrast, some ciliate sequences were found only in some of the copepods examined, suggesting the host selectivity and geographic differentiation of ciliates, which requires further verification by more extensive sampling. Our results reveal the wide occurrence and high genetic diversity of symbiotic ciliates on marine copepods and highlight the need to systematically investigate the host- and geography-based genetic differentiation and ecological roles of these ciliates globally.

  6. Prevalent ciliate symbiosis on copepods: high genetic diversity and wide distribution detected using small subunit ribosomal RNA gene.

    Directory of Open Access Journals (Sweden)

    Zhiling Guo

    Full Text Available Toward understanding the genetic diversity and distribution of copepod-associated symbiotic ciliates and the evolutionary relationships with their hosts in the marine environment, we developed a small subunit ribosomal RNA gene (18S rDNA-based molecular method and investigated the genetic diversity and genotype distribution of the symbiotic ciliates on copepods. Of the 10 copepod species representing six families collected from six locations of Pacific and Atlantic Oceans, 9 were found to harbor ciliate symbionts. Phylogenetic analysis of the 391 ciliate 18S rDNA sequences obtained revealed seven groups (ribogroups, six (containing 99% of all the sequences belonging to subclass Apostomatida, the other clustered with peritrich ciliate Vorticella gracilis. Among the Apostomatida groups, Group III were essentially identical to Vampyrophrya pelagica, and the other five groups represented the undocumented ciliates that were close to Vampyrophrya/Gymnodinioides/Hyalophysa. Group VI ciliates were found in all copepod species but one (Calanus sinicus, and were most abundant among all ciliate sequences obtained, indicating that they are the dominant symbiotic ciliates universally associated with copepods. In contrast, some ciliate sequences were found only in some of the copepods examined, suggesting the host selectivity and geographic differentiation of ciliates, which requires further verification by more extensive sampling. Our results reveal the wide occurrence and high genetic diversity of symbiotic ciliates on marine copepods and highlight the need to systematically investigate the host- and geography-based genetic differentiation and ecological roles of these ciliates globally.

  7. Modeling the Cienega de Santa Clara, Sonora, Mexico

    Science.gov (United States)

    Huckelbridge, K. H.; Hidalgo, H.; Dracup, J.; Ibarra Obando, S. E.

    2002-12-01

    The Cienega de Santa Clara is a created wetland located in the Colorado River Delta (CRD), in Sonora, Mexico. It is sustained by agricultural return flows from the Wellton-Mohawk Irrigation District in Arizona and the Mexicali Valley in Mexico. As one of the few wetlands remaining in the CRD, it provides critical habitat for several species of fish and birds, including several endangered species such as the desert pupfish (Cyprinodon macularius) and the Yuma clapper rail (Rallus longirostris yumanensis). However, this habitat may be in jeopardy if the quantity and quality of the agricultural inflows are significantly altered. This study seeks to develop a model that describes the dynamics of wetland hydrology, vegetation, and water quality as a function of inflow variability and salinity loading. The model is divided into four modules set up in sequence. For a given time step, the sequence begins with the first module, which utilizes basic diffusion equations to simulate mixing processes in the shallow wetland when the flow and concentration of the inflow deviate from the baseline. The second module develops a vegetated-area response to the resulting distribution of salinity in the wetland. Using the new area of vegetation cover determined by the second module and various meteorological variables, the third module calculates the evapotranspiration rate for the wetland, using the Penman-Montieth equation. Finally, the fourth module takes the overall evapotranspiration rate, along with precipitation, inflow and outflow and calculates the new volume of the wetland using a water balance. This volume then establishes the initial variables for the next time step. The key outputs from the model are salinity concentration, area of vegetation cover, and wetland volume for each time step. Results from this model will illustrate how the wetland's hydrology, vegetation, and water quality are altered over time under various inflow scenarios. These outputs can ultimately be used

  8. Act together – implications of symbioses in aquatic ciliates

    Directory of Open Access Journals (Sweden)

    Claudia eDziallas

    2012-08-01

    Full Text Available Mutual interactions in form of symbioses can increase the fitness of organisms and provide them with the capacity to occupy new ecological niches. The formation of obligate symbioses allows for rapid evolution of new life forms including multitrophic consortia. Microbes are important components of many known endosymbioses and their short generation times and strong potential for genetic exchange may be important drivers of speciation. Hosts provide endo- and ectosymbionts with stable, nutrient-rich environments and protection from environmental stresses. This is of particular importance in aquatic ecosystems, which are often highly variable, harsh and nutrient-deficient habitats. Thus it is not surprising that symbioses are widespread in both marine and freshwater environments. Symbioses in aquatic ciliates are good model systems for exploring symbiont-host interactions. Many ciliate species are globally distributed and have been intensively studied in the context of plastid evolution. Their relatively large cell size offers an ideal habitat for numerous microorganisms with different functional traits including commensalism and parasitism. Phagocytosis facilitates the formation of symbiotic relationships, particularly since some ingested microorganisms can escape the digestion. For example, photoautotrophic algae and methanogens represent endosymbionts that greatly extend the biogeochemical functions of their hosts. Consequently, symbiotic relationships between protists and prokaryotes are widespread and often result in new ecological functions of symbiotic communities. This enables ciliates to thrive under a wide range of environmental conditions including ultraoligotrophic or anoxic habitats. We summarize the current understanding of this exciting research topic to identify the many areas in which knowledge is lacking and to stimulate future research by providing an overview on new methodologies and by formulating a number of emerging

  9. Bioassay of environmental nickel dusts in a particle feeding ciliate

    Energy Technology Data Exchange (ETDEWEB)

    Smith-Sonneborn, J.; Leibovitz, B.; Donathan, R.; Fisher, G.L.

    1986-01-01

    The ciliated protozoan Paramecium was used to quantitate cytotoxic and genotoxic effects of nickel particles. The biological response of these eukaryotic cells to pure nickel powder and iron-nickel powder was assayed and compared to the effect of the inorganic carcinogen nickel subsulfide. Cytotoxicity was determined by the percent survival of treated cells. Genotoxicity was indicated by significant increases in the fraction of nonviable offspring (presumed index of lethal mutations) found after self-fertilization (autogamy) in parents from the nickel-treated versus neutral control groups. The cells were exposed to the dusts and the biological effects determined. Only the nickel subsulfide consistently showed a significant increase in offspring lethality.

  10. Actin evolution in ciliates (Protist, Alveolata) is characterized by high diversity and three duplication events.

    Science.gov (United States)

    Yi, Zhenzhen; Huang, Lijuan; Yang, Ran; Lin, Xiaofeng; Song, Weibo

    2016-03-01

    Ciliates possess two distinct nuclear genomes and unique genomic features, including highly fragmented chromosomes and extensive chromosomal rearrangements. Recent transcriptomic surveys have revealed that ciliates have several multi-copy genes providing an ideal template to study gene family evolution. Nonetheless, this process remains little studied in ciliated protozoa and consequently, the evolutionary patterns that govern it are not well understood. In this study, we focused on obtaining fine-scale information relative to ciliate species divergence for the first time. A total of 230 actin gene sequences were derived from this study, among which 217 were from four closely related Pseudokeronopsis species and 13 from other hypotrichous ciliates. Our investigation shows that: (1) At least three duplication events occurred in ciliates: diversification of three actin genes (Actin I, II, III) happened after the divergence of ciliate classes but before that of subclasses. And several recent and genus-specific duplications were followed within Actin I (Sterkiella, Oxytricha, Uroleptus, etc.), Actin II (Sterkiella), respectively. (2) Within the genus Pseudokeronopsis, Actin I gene duplication events happened after P. carnea and P. erythrina diverged. In contrast, in the morphologically similar species P. flava and P. rubra, the duplication event preceded diversification of the two species. The Actin II gene duplication events preceded divergence of the genus Pseudokeronopsis. (3) Phylogenetic analyses revealed that actin is suitable for resolving ciliate classes, but may not be used to infer lower taxon relationships.

  11. A BRIEF HISTORY OF CILIATE STUDIES (LATE XVII THE FIRST THIRD OF THE XX CENTURY)

    OpenAIRE

    2004-01-01

    The most prominent protistologists who worked with ciliates from the Leeuwenhoek time up to the beginning of the XX century are mentioned. Their achievements in ciliatology and especially in taxonomy of ciliates are briefly discussed on the basis of the original literature and reviews, published during the last 150 years.

  12. Grazing on autotrophic and heterotrophic picoplankton by ciliates isolated from Lake Kinneret, Israel

    NARCIS (Netherlands)

    Hadas, O.; Malinsky-Rushansky, N.; Pinkas, R.; Cappenberg, T.E.

    1998-01-01

    The rates of ingestion of three ciliates (Colpoda steinii, Cyclidium sp. and Stylonichia sp.) on fluorescently labeled heterotrophic bacteria, picocyanobacteria (Synechococcus P, CN) and a picoeukaryote isolated from Lake Kinneret were measured. Uptake values were 930, 35 and 1210 bacteria ciliate (

  13. The mitochondrial genomes of the ciliates Euplotes minuta and Euplotes crassus.

    NARCIS (Netherlands)

    Graaf, R.M. de; Alen, T.A. van; Dutilh, B.E.; Kuiper, J.W.P.; Zoggel, H.J. van; Huynh, M.B.; Gortz, H.D.; Huynen, M.A.; Hackstein, J.H.P.

    2009-01-01

    BACKGROUND: There are thousands of very diverse ciliate species from which only a handful mitochondrial genomes have been studied so far. These genomes are rather similar because the ciliates analysed (Tetrahymena spp. and Paramecium aurelia) are closely related. Here we study the mitochondrial geno

  14. New Primers Targeting Full-Length Ciliate 18S rRNA Genes and Evaluation of Dietary Effect on Rumen Ciliate Diversity in Dairy Cows.

    Science.gov (United States)

    Zhang, Jun; Zhao, Shengguo; Zhang, Yangdong; Sun, Peng; Bu, Dengpan; Wang, Jiaqi

    2015-12-01

    Analysis of the full-length 18S rRNA gene sequences of rumen ciliates is more reliable for taxonomical classification and diversity assessment than the analysis of partial hypervariable regions only. The objective of this study was to develop new oligonucleotide primers targeting the full-length 18S rRNA genes of rumen ciliates, and to evaluate the effect of different sources of dietary fiber (corn stover or a mixture of alfalfa hay and corn silage) and protein (mixed rapeseed, cottonseed, and/or soybean meals) on rumen ciliate diversity in dairy cows. Primers were designed based on a total of 137 previously reported ciliate 18S rRNA gene sequences. The 3'-terminal sequences of the newly designed primers, P.1747r_2, P.324f, and P.1651r, demonstrated >99% base coverage. Primer pair D (P.324f and P.1747r_2) was selected for the cloning and sequencing of ciliate 18S rRNA genes because it produced a 1423-bp amplicon, and did not amply the sequences of other eukaryotic species, such as yeast. The optimal species-level cutoff value for distinguishing between the operational taxonomic units of different ciliate species was 0.015. The phylogenetic analysis of full-length ciliate 18S rRNA gene sequences showed that distinct ciliate profiles were induced by the different sources of dietary fiber and protein. Dasytricha and Entodinium were the predominant genera in the ruminal fluid of dairy cattle, and Dasytricha was significantly more abundant in cows fed with corn stover than in cows fed with alfalfa hay and corn silage.

  15. SHORT TIME DYNAMICS OF CILIATE ABUNDANCE IN THE BOHAI SEA (CHINA)

    Institute of Scientific and Technical Information of China (English)

    张武昌; 王荣

    2002-01-01

    The ciliate community in the Bohai Sea (China) was studied from23 September to 7 October 1998. A hurricane struck the study area between the two grid station investigations, which were six days apart. Six tintinnid species(Favella panamensis, Leptotintinnus nordqvisti, Tintinnopsis butschlii, T. karajacensis, T. Radix and Wangiella dicollaria) were identified. Total cililate abundance in the surface layer ranged from 20 to 770 ind/l. In the first grid investigation, Tintinnopsis karajacensis dominated in the warm, low salinity waters at the Huanghe River mouth. Aloricate ciliate sp.1 dominated in the cold, high salinity waters in the northwest of the study area and the Bohai Strait. In the second grid investigation, T. Karajacensis almost disappeared. The abundance of aloricate ciliate sp.1 decreased drastically. The aloricate ciliate sp.2 dominatedat the Bohai Strait. The change of ciliate abundance may be due to the disturbance of hurricane.``

  16. Ecological functions of ciliated protozoa in marine ecosystem:effects on accumulation of ambient ammonia

    Institute of Scientific and Technical Information of China (English)

    Xu Henglong; Song Weibo; Zhu Mingzhuang; Wang Mei; Ma Honggang; Hu Xiaozhong

    2005-01-01

    Effects of ciliated protozoa, Euplotes vannus and Uronema marinum, on accumulation of ammonia in marine waters are detected using experimental ecological method, in order to reveal the contributions and functions of ciliates to the marine ecosystem. During experiments, the concentrations of ammonia-N, and the densities of ciliates and bacteria are measured. The results reveal that ciliates can change the procedure of ammonia accumulation by their grazing activity, and maintain ambient ammonium at low levels through interrupting the stationary phase of bacteria population growth and enhancing their growth and metabolism. The present work confirms that ciliates, as bacteria-predators, play positive roles in maintaining and improving water quality in marine ecosystems, especially in intensive mariculture biotopes.

  17. Ciliated protozoa of two antarctic lakes: analysis by quantitative protargol staining and examination of artificial substrates

    Science.gov (United States)

    Kepner, R. L. Jr; Wharton, R. A. Jr; Coats, D. W.; Wharton RA, J. r. (Principal Investigator)

    1999-01-01

    Planktonic and artificial substrate-associated ciliates have been identified in two perennially ice-covered antarctic lakes of the McMurdo Dry Valleys. Abundances estimated by quantitative protargol staining ranged from Vorticella. The taxonomic findings compare favorably with those of previous investigators; however four previously unreported genera were observed in both Lakes Fryxell and Hoare. The variability in the depth distributions of ciliates in Lake Fryxell is explained in terms of lake physicochemical properties and ciliate prey distributions, while factors related to temporal succession in the Lake Hoare assemblage remain unexplained. Local marine or temperate zone freshwater habitats are a more likely source than the surrounding dry valleys soils for present ciliate colonists in these lakes. Although the taxonomic uncertainties require further examination, our results suggest that ciliate populations in these antarctic lakes undergo significant fluctuations and are more diverse than was previously recognized.

  18. Revisiting fifty years of research on pheromone signaling in ciliates.

    Science.gov (United States)

    Luporini, Pierangelo; Pedrini, Bill; Alimenti, Claudio; Vallesi, Adriana

    2016-08-01

    Among protists, pheromones have been identified in a great variety of algal species for their activity in driving gamete-gamete interactions for fertilization. Analogously in ciliates, pheromones have been identified for their activity in inducing the sexual phenomenon of conjugation. Although this identification was pioneered by Kimball more than fifty years ago, an effective isolation and chemical characterization of ciliate pheromones has remained confined to species of Blepharisma, Dileptus and Euplotes. In Euplotes species, in which the molecular structures have been determined, pheromones form species-specific families of structurally homologous helical, cysteine-rich, highly-stable proteins. Being structurally homologous, they can bind cells in competition with one another, raising interesting functional analogies with the families of growth factors and cytokines that regulate cell differentiation and development in higher organisms. In addition to inducing conjugation by binding cells in heterologous fashion, Euplotes pheromones act also as autocrine growth factors by binding to, and promoting the vegetative reproduction of the same cells from which they originate. This autocrine activity is most likely primary, providing a concrete example of how the original function of a molecule can be obscured during evolution by the acquisition of a new one.

  19. REGISTRO HOSPITALARIO DE INFARTO AGUDO DE MIOCARDIO EN SANTA CLARA / Hospital registry of acute miocardial infarction in Santa Clara

    Directory of Open Access Journals (Sweden)

    Alberto Morales Salinas

    2010-09-01

    Full Text Available Resumen Introducción y objetivos: En Cuba las estadísticas vitales de la morbi-mortalidad por infarto agudo de miocardio proceden de pequeñas áreas de salud. El objetivo fue identificar las principales características y conducta hospitalaria de los pacientes con infarto a través de un registro hospitalario de infarto. Métodos: Se monitorizaron los casos de infarto ocurridos en pacientes de 45 a 74 años de edad y residentes en Santa Clara, durante los años 2007 y 2008. Las fuentes de información fueron: listados de egresos hospitalarios, registros hospitalarios de infarto de miocardio, certificados de defunción y registros de autopsias nosocomiales. Se utilizó la metodología MONICA (MONItoring Trends and Determinants in CArdiovascular Disease Project. Resultados: Se registraron 297 pacientes con infarto. El 62,7 % de los varones y el 46,8 % de las mujeres recibieron tratamiento de reperfusión. Las letalidades hospitalarias en varones y mujeres fueron de 25,3 % y 45 %. Las variables que se relacionaron con una mayor mortalidad fueron la edad, el sexo femenino, la frecuencia cardíaca alta, el infarto de topografía anterior, la creatinina elevada, así como los antecedentes personales de cardiopatía isquémica previa y diabetes mellitus. Mientras que el tratamiento con fibrinolíticos y/o betabloqueadores se correlacionaron inversamente con la mortalidad. Conclusiones: Existió una elevada prevalencia de dislipidemia desconocida y letalidad hospitalaria a 28 días; así como una baja utilización de las estrategias cruentas. La hipertensión sistólica al ingreso se relacionó con un mejor pronóstico. / Abstract Introduction and objectives: In Cuba, the vital statistics of morbi-mortality due to acute myocardial infarction come from small health areas. The objective of this study was to identify the main characteristics and hospital management of patients with myocardial infarction, through a hospital registry of infarctions

  20. Diverse modes of reproduction in the marine free-living ciliate Glauconema trihymene

    Directory of Open Access Journals (Sweden)

    Zufall Rebecca A

    2010-04-01

    Full Text Available Abstract Background Most free-living ciliates reproduce by equal fission or budding during vegetative growth. In certain ciliates, reproduction occurs inside the cyst wall, viz. reproductive cysts, but more complex reproductive strategies have generally been thought to be confined to parasitic or symbiotic species, e.g. Radiophrya spp. Results In addition to equal fission, asymmetric binary division and reproductive cysts were discovered in the free-living bacterivorous scuticociliate Glauconema trihymene Thompson, 1966. Asymmetric division is an innate physiological state that can be induced by sufficient food, and the higher the food concentration, the longer the asymmetric division persists. During asymmetric division, nuclear and somatic structures divide with transiently arrested cytokinesis and variable positioning of macronuclei. Phylogenetic analysis, based on the small subunit of ribosomal DNA (SSU rDNA sequences, showed that the G. trihymene isolate studied here nests with typical scuticociliates and is paraphyletic to both the symbiotic apostome and astome ciliates, some of which also produce progeny by asymmetric division. Conclusions The asymmetric division in G. trihymene has no precedent among undisturbed free-living ciliates. The coexistence of multiple modes of reproduction may represent a previously undescribed reproductive strategy for ciliates living on food patches in coastal waters. This may also be indicative of similar reproductive strategies among other polyphenic ciliates, which have not been intensively studied. Asymmetric division provides a special opportunity for studying ciliates' phenotypic plasticity and may also illuminate the origins of multicellularity.

  1. Climate scaling behaviour in the dynamics of the marine interstitial ciliate community

    Science.gov (United States)

    Varotsos, Costas A.; Mazei, Yuri A.; Burkovsky, Igor; Efstathiou, Maria N.; Tzanis, Chris G.

    2016-08-01

    The present paper uses characteristics of the marine interstitial ciliate community in the White Sea intertidal sandflat during the period of 1991-2011, in order to study its long-term dynamics, investigating in particular whether it exhibits scaling behaviour into its fluctuations, which is a characteristic feature of the climate system. To this aim, a recently proposed version of the detrended fluctuation analysis is herewith employed which has been successfully applied to a wide range of simulated and physiologic time series in recent years. In case that the fluctuations of the ciliate community present self-similarity processes, an ideal field test for the currently proposed biological models will be established, allowing to evaluate their reliability. Indeed, we show for the first time that different ciliate species exhibit long-range power-law persistent correlations. This means that ciliate fluctuations in different intervals are positively correlated, obeying a power-law behaviour. Although the origin of power-law temporal evolution of ciliates should be further investigated, this finding is probably associated with the self-organized criticality of ciliates. It should be noted that the long-range correlations obtained do not imply the presence of specific cycles but rather the existence of dynamic links between long-term and short-term temporal evolution. The scaling behaviour found in marine interstitial ciliate community should be taken into account in the investigation of their response to the present or future climate change.

  2. Effect of salt and urban water samples on bacterivory by the ciliate, Tetrahymena thermophila

    Energy Technology Data Exchange (ETDEWEB)

    St Denis, C.H.; Pinheiro, M.D.O.; Power, M.E. [Department of Biology, University of Waterloo, 200 University Ave. W, Waterloo, Ontario N2L 3G1 (Canada); Bols, Niels C., E-mail: ncbols@uwaterloo.c [Department of Biology, University of Waterloo, 200 University Ave. W, Waterloo, Ontario N2L 3G1 (Canada)

    2010-02-15

    The effect of road salt on the eating of bacteria or bacterivory by the ciliate, Tetrahymena thermophila, was followed in non-nutrient Osterhout's solution with Escherichia coli expressing green fluorescent protein. Bacterivory was impaired at between 0.025 and 0.050% w/v but the ciliates appeared to have normal morphologies and motilities, whereas at above 0.1%, bacterivory was blocked and many ciliates died. By contrast, E. coli remained viable, suggesting salt could alter predator-prey relationships in microbial communities. In nutrient medium, salt was not toxic and the ciliates grew. After growth in salt, ciliates consumed bacteria in 0.2% salt, indicating the salt acclimation of bacterivory. Bacteria and ciliates were added to urban creek samples to compare their capacity to support exogenous bacterivory. Even though samples were collected weekly for a year and be expected to have fluctuating salt levels as a result of deicing, all creek samples supported a similar level of bacterivory. - Road salt at some concentrations inhibits bacterivory by ciliates, and thus potentially could alter the microbial food web.

  3. First report of ciliate (Protozoa) epibionts on deep-sea harpacticoid copepods

    Science.gov (United States)

    Sedlacek, Linda; Thistle, David; Fernandez-Leborans, Gregorio; Carman, Kevin R.; Barry, James P.

    2013-08-01

    We report the first observations of ciliate epibionts on deep-sea, benthic harpacticoid copepods. One ciliate epibiont species belonged to class Karyorelictea, one to subclass Suctoria, and one to subclass Peritrichia. Our samples came from the continental rise off central California (36.709°N, 123.523°W, 3607 m depth). We found that adult harpacticoids carried ciliate epibionts significantly more frequently than did subadult copepodids. The reason for the pattern is unknown, but it may involve differences between adults and subadult copepodids in size or in time spent swimming. We also found that the ciliate epibiont species occurred unusually frequently on the adults of two species of harpacticoid copepod; a third harpacticoid species just failed the significance test. When we ranked the 57 harpacticoid species in our samples in order of abundance, three species identified were, as a group, significantly more abundant than expected by chance if one assumes that the abundance of the group and the presence of ciliate epibionts on them were uncorrelated. High abundance may be among the reasons a harpacticoid species carries a ciliate epibiont species disproportionately frequently. For the combinations of harpacticoid species and ciliate epibiont species identified, we found one in which males and females differed significantly in the proportion that carried epibionts. Such a sex bias has also been reported for shallow-water, calanoid copepods.

  4. Wave propagation and site response in the Santa Clara Valley

    Science.gov (United States)

    Fletcher, Joe B.; Boatwright, J.; Lindh, A.G.

    2003-01-01

    Forty-two portable digital instruments were deployed across the Santa Clara Valley from June until early November 1998; this array recorded 14 small and moderate local events and 7 large teleseismic events. We analyze the ground motion from these events to determine station delays and relative site amplification within the Valley. P waves from an event at the southern edge of the valley are early (??t > -0.35 sec) at stations over an axial ridge in the basement interface in the middle of the valley, but late (??t < 0.20 sec) for stations over the Cupertino and Evergreen basins to either side. The S-wave delays are approximately twice as large. Teleseismic P-waves from an M = 7.0 event beneath the Bonin Islands show a similar pattern in travel-time delays. The P waves are amplified by factors of 1.5-3 for frequencies below 2 Hz at stations within either basin, compared with stations on the axial ridge. The P-wave coda appear enhanced at 2-3 sec, but coda Q estimates at frequencies from 0.2 to 1.1 Hz are not markedly different at stations over the basin compared with stations on the ridge with the possible exceptions of consistently high values over the northern end of the Evergreen Basin. We invert the S-wave spectra for site-specific attenuation and amplification from the 14 local events by assuming a common source spectra for each event, 1/r geometrical spreading, and constraining the inversion using the 30-m velocity profile at four stations in the array. The largest amplifications occurred in the 1- to 6-Hz band at stations near the northwest edge of the Evergreen basin. While the highest amplifications occur at stations with the lowest S-wave velocities, the scatter obscures the correlation between velocity and amplification. The stations in the basins are characterized by higher attenuation than the stations on the basement ridge.

  5. Clara Haber, nee Immerwahr (1870-1915): Life, Work and Legacy.

    Science.gov (United States)

    Friedrich, Bretislav; Hoffmann, Dieter

    2016-03-01

    We examine the life, work, and legacy of Clara Haber, nee Immerwahr, who became the first woman to earn a doctorate from the University of Breslau, in 1900. In 1901 she married the chemist Fritz Haber. With no employment available for female scientists, Clara freelanced as an instructor in the continued education of women, mainly housewives, while struggling not to become a housewife herself. Her duties as a designated head of a posh household hardly brought fulfillment to her life. The outbreak of WWI further exacerbated the situation, as Fritz Haber applied himself in extraordinary ways to aid the German war effort. The night that he celebrated the "success" of the first chlorine cloud attack, Clara committed suicide. We found little evidence to support claims that Clara was an outspoken pacifist who took her life because of her disapproval of Fritz Haber's involvement in chemical warfare. We conclude by examining "the myth of Clara Immerwahr" that took root in the 1990s from the perspective offered by the available scholarly sources, including some untapped ones.

  6. Clara Haber, nee Immerwahr (1870–1915): Life, Work and Legacy

    Science.gov (United States)

    2016-01-01

    Abstract We examine the life, work, and legacy of Clara Haber, nee Immerwahr, who became the first woman to earn a doctorate from the University of Breslau, in 1900. In 1901 she married the chemist Fritz Haber. With no employment available for female scientists, Clara freelanced as an instructor in the continued education of women, mainly housewives, while struggling not to become a housewife herself. Her duties as a designated head of a posh household hardly brought fulfillment to her life. The outbreak of WWI further exacerbated the situation, as Fritz Haber applied himself in extraordinary ways to aid the German war effort. The night that he celebrated the “success” of the first chlorine cloud attack, Clara committed suicide. We found little evidence to support claims that Clara was an outspoken pacifist who took her life because of her disapproval of Fritz Haber's involvement in chemical warfare. We conclude by examining “the myth of Clara Immerwahr” that took root in the 1990s from the perspective offered by the available scholarly sources, including some untapped ones. PMID:27099403

  7. Spatially explicit West Nile virus risk modeling in Santa Clara County, California.

    Science.gov (United States)

    Konrad, Sarah K; Miller, Scott N; Reeves, Will K; Tietze, Noor S

    2009-06-01

    A geographic information system model designed to identify regions at risk for West Nile virus (WNV) transmission was calibrated and tested with data collected in Santa Clara County, California. American Crows that died from WNV infection in 2005 provided spatial and temporal ground truth. When the model was run with parameters based on Culex tarsalis infected with the NY99 genotype of the virus, it underestimated WNV occurrence in Santa Clara Co. The parameters were calibrated to fit the field data by reducing the number of degree-days necessary to reach the mosquito's extrinsic incubation period from 109 to 76. The calibration raised model efficiency from 61% to 92% accuracy, and the model performed well the following year in Santa Clara Co.

  8. Ciliated hepatic foregut cyst: report of first case in China and review of literature

    Institute of Scientific and Technical Information of China (English)

    蔡秀军; 黄迪宇; 梁霄; 虞洪; 李伟; 王先法; 彭淑牖

    2004-01-01

    Objective: To report the first case of ciliated hepatic foregut cyst in China, and review of literature to introduce the characteristics of this disease for doctors to recognize this disease.Method: Report the clinical procedure of diagnosis and treatment for the first case of ciliated hepatic foregut cyst in China, and to review the embryologic genesis, incidence,clinical manifestation, radiologic features and therapeutic principle of this disease. Results: We performed the resection for ciliated hepatic foregut cyst under laparoscopy; the patient recovered well after the procedure. Conclusion: Ciliated hepatic foregut cyst is quite rare clinically, belongs to non-parasitic,solitary and unilocular cystic lesion, is always less than 4cm in diameter, mostly seen in the left lobe, and has the tendency of malignant change. It should be removed as soon as diagnosed.

  9. New records of epibiont Ciliates (Ciliophora) from Indian coast with descriptions of six new species

    Digital Repository Service at National Institute of Oceanography (India)

    Chatterjee, T.; Fernandez-Leborans, G.; Ramteke, D.; Ingole, B

    Six epibiont ciliates Cothurnia palkensis, C. nova, C. disper, C. dovgali, C. mannaerensis and C. clampi are described as new for science from the Indian coast. Acineta truncata Collin, 1909 and A. tuberosa Ehrenberg, 1834 are reported here...

  10. Benthic ciliate and meiofaunal communities in two contrasting habitats of an intertidal estuarine wetland

    Science.gov (United States)

    Du, Yongfen; Xu, Kuidong; Warren, Alan; Lei, Yanli; Dai, Renhai

    2012-05-01

    Annual variations in benthic meiofaunal and ciliated protozoan communities were investigated using monthly samplings from June 2006 to May 2007 in two habitats characterized by different vegetal coverage in an estuarine intertidal wetland of Qingdao Jiaozhou Bay, China. The sediment composition was stable at each site: sediments densely covered with seagrass (Suaeda glauca) in the lower estuarine site (Station S) were finer, with higher content of organic matter, phaeopigments and water than sediments at the upper estuarine site (Station S-P) which was unvegetated other than for patches of S. glauca and common reed (Phragmites australis). Chlorophyll a exhibited a similar distribution in the two habitats. A total of 14 meiofaunal groups, and 249 species of ciliates belonging to 37 genera, 28 families and 16 orders, were isolated from the two sites. Univariate and multivariate measures of the communities were significantly different between the two habitats. There were higher abundances of ciliates and meiofauna, and a greater diversity of ciliates, at Station S than Station S-P (223 vs. 61 species). Herbivorous ciliates were numerically predominant in ciliate communities at both sites. The representative ciliates at Station S-P belonged to the Cyrtophorida and appeared to be a reduced subset of the assemblage at Station S, which was characterized by members of the Prostomatida, Cyrtophorida, Hypotrichida and Scuticociliatida. More than 96% of the total meiofauna were nematodes, accounting for 93% of the differences in the abundance compositions of the meiofaunal communities between habitats. The average individual weights of nematodes were nearly 3 times greater at Station S than Station S-P, indicating a distinctive species composition at each site. Temperature, salinity and food availability were key factors that regulated the ciliate and meiofaunal community structure. Nematodes were the dominant group in terms of the combined abundance, biomass and benthic

  11. Clara Barton: teacher, nurse, Civil War heroine, founder of the American Red Cross.

    Science.gov (United States)

    Evans, Gerald D

    2003-01-01

    Clara Barton was a nineteenth century woman driven to greatness. She was a teacher, a nurse, a Civil War heroine and founder of the American Red Cross. In order to cut a path into the future we must know where we have been. The story of Clara Barton is about someone who cut that path. It is about courage, overcoming obstacles, never giving up and doing the job that needs doing. What makes it fascinating is the human side, the weaknesses that coloured her life. We can learn from her journey as we develop our own path into the future.

  12. Ciliated protozoa of two antarctic lakes: analysis by quantitative protargol staining and examination of artificial substrates

    Science.gov (United States)

    Kepner, R. L. Jr; Wharton, R. A. Jr; Coats, D. W.; Wharton RA, J. r. (Principal Investigator)

    1999-01-01

    Planktonic and artificial substrate-associated ciliates have been identified in two perennially ice-covered antarctic lakes of the McMurdo Dry Valleys. Abundances estimated by quantitative protargol staining ranged from < 5 to 31690 cells l-1, levels that are comparable to those previously obtained using other methods. Nineteen ciliate taxa were identified from these lakes, with the most frequently encountered genera being Plagiocampa, Askenasia, Monodinium, Sphaerophrya and Vorticella. The taxonomic findings compare favorably with those of previous investigators; however four previously unreported genera were observed in both Lakes Fryxell and Hoare. The variability in the depth distributions of ciliates in Lake Fryxell is explained in terms of lake physicochemical properties and ciliate prey distributions, while factors related to temporal succession in the Lake Hoare assemblage remain unexplained. Local marine or temperate zone freshwater habitats are a more likely source than the surrounding dry valleys soils for present ciliate colonists in these lakes. Although the taxonomic uncertainties require further examination, our results suggest that ciliate populations in these antarctic lakes undergo significant fluctuations and are more diverse than was previously recognized.

  13. 76 FR 16811 - Notice of Realty Action: Direct Sale of Public Lands in Santa Clara County, CA

    Science.gov (United States)

    2011-03-25

    ... Bureau of Land Management Notice of Realty Action: Direct Sale of Public Lands in Santa Clara County, CA... public land are proposed for direct sale to the Santa Clara County Open Space Authority (Authority) in... parcels, isolated from other public lands. The BLM is proposing a direct sale to the Authority because...

  14. 77 FR 28895 - Don Edwards San Francisco Bay National Wildlife Refuge, Alameda, Santa Clara, and San Mateo...

    Science.gov (United States)

    2012-05-16

    ... Fish and Wildlife Service Don Edwards San Francisco Bay National Wildlife Refuge, Alameda, Santa Clara... Wildlife Refuge, located in the Alameda, Santa Clara, and San Mateo Counties of California, consists of... Federal Register notice of intent on February 23, 2010 (75 FR 8106), to solicit additional comments....

  15. See Us as We Are: Clara Chu--University of California at Los Angeles

    Science.gov (United States)

    Library Journal, 2005

    2005-01-01

    This article highlights the influence of Clara Chu, associate professor in the University of California at Los Angeles's (UCLA) Department of Information Studies. Her influence extends far beyond her campus. She works with many organizations to advance multiculturalism in librarianship. As a prolific researcher, writer, and speaker, Chu has given…

  16. Clara Barton High School Bilingual Program. O.E.E. Evaluation Report, 1982-1983.

    Science.gov (United States)

    Collazo-Levy, Dora; Sica, Michael

    In 1982-83, the program evaluated here provided tutorial and supportive services to approximately 50 Spanish-speaking students of limited English proficiency (LEP) in grades 9-12 at Clara Barton High School, Brooklyn, New York. The program's main objective was to enable LEP students to function successfully in terms of language achievement and…

  17. Spatially Explicit West Nile Virus Risk Modeling in Santa Clara County, CA

    Science.gov (United States)

    A geographic information systems model designed to identify regions of West Nile virus (WNV) transmission risk was tested and calibrated with data collected in Santa Clara County, California. American Crows that died from WNV infection in 2005, provided spatial and temporal ground truth. When the mo...

  18. Ciliate Paramecium is a natural reservoir of Legionella pneumophila

    Science.gov (United States)

    Watanabe, Kenta; Nakao, Ryo; Fujishima, Masahiro; Tachibana, Masato; Shimizu, Takashi; Watarai, Masahisa

    2016-04-01

    Legionella pneumophila, the causative agent of Legionnaires’ disease, replicates within alveolar macrophages and free-living amoebae. However, the lifestyle of L. pneumophila in the environment remains largely unknown. Here we established a novel natural host model of L. pneumophila endosymbiosis using the ciliate Paramecium caudatum. We also identified Legionella endosymbiosis-modulating factor A (LefA), which contributes to the change in life stage from endosymbiosis to host lysis, enabling escape to the environment. We isolated L. pneumophila strains from the environment, and they exhibited cytotoxicity toward P. caudatum and induced host lysis. Acidification of the Legionella-containing vacuole (LCV) was inhibited, and enlarged LCVs including numerous bacteria were observed in P. caudatum infected with L. pneumophila. An isogenic L. pneumophila lefA mutant exhibited decreased cytotoxicity toward P. caudatum and impaired the modification of LCVs, resulting in the establishment of endosymbiosis between them. Our results suggest that L. pneumophila may have a mechanism to switch their endosymbiosis in protistan hosts in the environment.

  19. Hydrodynamical entrapment of ciliates at the air-liquid interface

    Science.gov (United States)

    Ferracci, Jonathan; Ueno, Hironori; Numayama-Tsuruta, Keiko; Imai, Yohsuke; Yamaguchi, Takami; Ishikawa, Takuji

    2012-11-01

    We found the new phenomenon of the entrapment of ciliates at the air-water interface, though they are not trapped by a solid interface. We first characterize the behaviours of cells at the interface by comparing it to those away from interfaces. The results showed that the cell's swimming velocity is considerably reduced at the air-water interface. In order to experimentally verify the possible physiological causes of the entrapment, we observed their behaviours in absence of positive chemotaxis for oxygen and the negative geotaxis. The results illustrated that the entrapment phenomenon was not dependent on these physiological conditions. The experiments using surfactant revealed that the entrapment phenomenon was strongly affected by the velocity-stress conditions at the interface. This fact was confirmed numerically by a boundary element method, i.e. the stress-free condition at the air-liquid interface is one of the main mechanisms of the entrapment phenomenon found in the experiments. Since the entrapment phenomenon found in this study affects the cell-cell interactions and the mass transport at the interface, the knowledge obtained in this study is useful for better understanding the complex behaviours of swimming microorganisms in nature. PhD student in the Physiological Flow Studies Laboratory.

  20. Ciliate Paramecium is a natural reservoir of Legionella pneumophila

    Science.gov (United States)

    Watanabe, Kenta; Nakao, Ryo; Fujishima, Masahiro; Tachibana, Masato; Shimizu, Takashi; Watarai, Masahisa

    2016-01-01

    Legionella pneumophila, the causative agent of Legionnaires’ disease, replicates within alveolar macrophages and free-living amoebae. However, the lifestyle of L. pneumophila in the environment remains largely unknown. Here we established a novel natural host model of L. pneumophila endosymbiosis using the ciliate Paramecium caudatum. We also identified Legionella endosymbiosis-modulating factor A (LefA), which contributes to the change in life stage from endosymbiosis to host lysis, enabling escape to the environment. We isolated L. pneumophila strains from the environment, and they exhibited cytotoxicity toward P. caudatum and induced host lysis. Acidification of the Legionella-containing vacuole (LCV) was inhibited, and enlarged LCVs including numerous bacteria were observed in P. caudatum infected with L. pneumophila. An isogenic L. pneumophila lefA mutant exhibited decreased cytotoxicity toward P. caudatum and impaired the modification of LCVs, resulting in the establishment of endosymbiosis between them. Our results suggest that L. pneumophila may have a mechanism to switch their endosymbiosis in protistan hosts in the environment. PMID:27079173

  1. Application of nested PCR-DGGE (denaturing gradient gel electrophoresis) for the analysis of ciliate communities in soils.

    Science.gov (United States)

    Shimano, Satoshi; Sambe, Mitsuo; Kasahara, Yasuhiro

    2012-01-01

    Ciliates play important roles as prey and predators in ecosystems. Changes in the ciliate community can affect the composition and population of microfauna and microflora in ecosystems. To investigate the structure of ciliate communities, we developed a nested PCR-DGGE method, which combines a universal eukaryotic-specific primer set in the first PCR step with a ciliate-specific primer set in the second PCR step, to amplify 18S rRNA genes from ciliates. The 300 bp DGGE fragments generated more bands on the gel than the 600 bp DGGE fragments. Prior to bead beating, DNA extraction of ciliates from soil samples was optimized with a combination of freeze-thaw cycles and ultrasonication. We applied this nested PCR-DGGE method to agricultural soils amended with 0, 120, 300, and 600 t ha⁻¹ year⁻¹ of livestock slurry. The results from the DGGE profiles and principal component analysis (PCA) revealed that the supplement of slurry to soils influenced the ciliate communities. From phylogenetic analysis, 108 DGGE bands were assigned to six classes, which included Spirotrichea and Colpodea, of the subphylum Intramacronucleata, and one class of the subphylum Postciliodesmatophora. These results indicated that a wide variety of taxonomic groups were detected by DGGE profiling. Thus, the nested PCR-DGGE method described here could clearly differentiate between ciliate communities within soil samples and allowed for the phylogenetic identification of these ciliates at the class level.

  2. First report of predation of Giardia sp. cysts by ciliated protozoa and confirmation of predation of Cryptosporidium spp. oocysts by ciliate species.

    Science.gov (United States)

    Siqueira-Castro, Isabel Cristina Vidal; Greinert-Goulart, Juliane Araújo; Bonatti, Tais Rondello; Yamashiro, Sandra; Franco, Regina Maura Bueno

    2016-06-01

    Ciliated protozoa are important components of the microbial food web in various habitats, especially aquatic environments. These organisms are useful bioindicators for both environmental quality assessment and the wastewater purification process. The pathogenic parasitic protozoan species Giardia and Cryptosporidium represent a significant concern for human health, being responsible for numerous disease outbreaks worldwide. The predation of cysts and oocysts in 15 ciliate species from water and sewage samples collected in Campinas, São Paulo, Brazil were verified under laboratory conditions. The ciliated protozoan species were selected based on their mode of nutrition, and only bacterivorous and suspension-feeders were considered for the experiments. The species Blepharisma sinuosum, Euplotes aediculatus, Sterkiella cavicola, Oxytricha granulifera, Vorticella infusionum, Spirostomum minus, and Stentor coeruleus ingested cysts and oocysts, the resistance forms of Giardia spp. and Cryptosporidium spp., respectively. This is the first time that the ingestion of Giardia cysts by ciliated protozoa has been reported. These findings may contribute to a better understanding of the biological removal of these pathogens from aquatic environments.

  3. First light measurements of the Total Solar Irradiance experiment CLARA on NORSAT-1

    Science.gov (United States)

    Schmutz, Werner

    2016-07-01

    NORSAT-1 is a Norwegian micro-satellite, which will be launched April 22, 2016. (In the future at the time of writing this abstract.) The satellite carries two scientific instruments and an AIS receiver for performing ship detection from space. One of the scientific instruments is a Compact Light-weight Absolute RAdiometer (CLARA) and the other is a Langmuir Probe instrument comprising four probes mounted on booms. The latter experiment will measure electron density and the platform's floating potential along the orbit. The University of Oslo provides the Langmuir probes. The radiometer experiment CLARA has been built by PMOD/WRC funded through the Swiss PRODEX program. It will measure Total Solar Irradiance with an instrument of novel design that is optimized for minimizing mass and size by still ensuring highest measuring accuracy and thermal stability. The radiometers of CLARA have been fully characterized as well as calibrated at the TRF facility. It is expected that the first light accuracy of the absolute measurement of Total Solar Irradiance will be better than pm0.3 W/m^{2, allowing to probe the current TSI composite for its absolute level. The presentation will give an overview of the CLARA instrument and its calibration. It is expected that at the time of the COSPAR conference the first light TSI value of CLARA/NORSAT-1 is ready for publication. Together with a previous absolute TSI measurements available for July 27, 2010 measured by PREMOS/PICARD the new absolute TSI measurement will be used to test the accuracy of long term TSI trend given by the relative TSI composite.

  4. On classical and quantum error-correction in ciliate mate selection.

    Science.gov (United States)

    Clark, Kevin B

    2010-07-01

    Ciliated protozoa sensing pheromones secreted from nonself mating types engage in preconjugal "courtship" dances and contacts. Using simulated "social" trials, I recently showed the heterotrich ciliate, Spirostomum ambiguum, can learn to advertise degrees of mating fitness to "suitors" and "rivals" when serially contracting or (ciliary) reversing at variable rates. Conspicuous consumers signal higher quality reproductive status by playing "harder-to-get" via metabolically wasteful avoidance displays that hinder the exchange of preconjugal touches between "courting" couples. Conversely, prudent savers conserve energy pending situations more favorable for conjugating a partner. These ciliates reply with lower avoidance frequencies, guaranteeing nearby conspecifics of being "easier-to-get". By deciding to switch from behavioral strategies signaling conspicuous consumption to those signaling prudent savings, fitter ciliates learn to altruistically sacrifice net payoffs and persuade suitors to participate in paired reproduction. Less fit ciliates, unable to sustain long periods of high response rates, switch their behavioral strategies of prudent savings to briefly emit conspicuous consumption and thus learn to opportunistically cheat superior rivals. Mating competency depends, in part, on the efficiency of heuristics formed from recursive strategy searches and use. Heuristics represent stored patterns of action which evolve into ordered computational networks supporting entire courting repertoires. As ciliates expand signaling skills over many trials, the connectivity between strategies strengthens from Hebbian-like learning, leading to faster decisions about the appropriateness of courting messages and replies. The best experts master signaling decisions at efficiencies comparable to finding target solutions from superposed states with Grover's quantum search algorithm. I here append these findings with a critique on the feasibility of serial behavioral strategies to

  5. The mitochondrial genomes of the ciliates Euplotes minuta and Euplotes crassus

    Directory of Open Access Journals (Sweden)

    Huynh Minh

    2009-11-01

    Full Text Available Abstract Background There are thousands of very diverse ciliate species from which only a handful mitochondrial genomes have been studied so far. These genomes are rather similar because the ciliates analysed (Tetrahymena spp. and Paramecium aurelia are closely related. Here we study the mitochondrial genomes of the hypotrichous ciliates Euplotes minuta and Euplotes crassus. These ciliates are only distantly related to Tetrahymena spp. and Paramecium aurelia, but more closely related to Nyctotherus ovalis, which possesses a hydrogenosomal (mitochondrial genome. Results The linear mitochondrial genomes of the hypotrichous ciliates Euplotes minuta and Euplotes crassus were sequenced and compared with the mitochondrial genomes of several Tetrahymena species, Paramecium aurelia and the partially sequenced mitochondrial genome of the anaerobic ciliate Nyctotherus ovalis. This study reports new features such as long 5'gene extensions of several mitochondrial genes, extremely long cox1 and cox2 open reading frames and a large repeat in the middle of the linear mitochondrial genome. The repeat separates the open reading frames into two blocks, each having a single direction of transcription, from the repeat towards the ends of the chromosome. Although the Euplotes mitochondrial gene content is almost identical to that of Paramecium and Tetrahymena, the order of the genes is completely different. In contrast, the 33273 bp (excluding the repeat region piece of the mitochondrial genome that has been sequenced in both Euplotes species exhibits no difference in gene order. Unexpectedly, many of the mitochondrial genes of E. minuta encoding ribosomal proteins possess N-terminal extensions that are similar to mitochondrial targeting signals. Conclusion The mitochondrial genomes of the hypotrichous ciliates Euplotes minuta and Euplotes crassus are rather different from the previously studied genomes. Many genes are extended in size compared to mitochondrial

  6. Philasterides dicentrarchi, a histophagous ciliate causing scuticociliatosis in olive flounder, Philasterides dicentrarchi--histopathology investigations.

    Science.gov (United States)

    Harikrishnan, Ramasamy; Jin, Chang-Nam; Kim, Ju-Sang; Balasundaram, Chellam; Heo, Moon-Soo

    2012-03-01

    Philasterides dicentrarchi is a histophagous scuticociliate infecting Korean olive flounder farms in Jeju Island, South Korea, where it causes significant economic losses. However, the route of entry of these parasites in olive flounder is currently unknown. In the present study, we attempted experimental infection with different doses (concentrations) of P. dicentrarchi by intraperitoneal (IP) injection; maximum cumulative mortality of 95% was recorded on the administration of 2.1×10(8) ciliates/ml. In small size group (3 cm length, 24±2 gwt) the ciliates were found in connective tissues of muscle, fins, and nervous tissue while in large size group (5 cm length, 47±3 gwt), the ciliates were predominantly occurred with associated symptoms of liquefaction in the central nervous system. The major clinico-pathological manifestations were loss of scales, appearance of bleached spots that coalesced to form brownish patches, hemorrhagic, and severe dermal necrotic lesion. In addition there was degeneration of muscle fibers, necrosis of the hepatic parenchyma, and severe edema of the intestinal walls, extensive fouling, necrotic degeneration and hyperplasia in the gill bronchial epithelium. In this study, many ciliates were found in the blood vessel, brain, dorsal fins, muscle, kidney, and vertebra of infected flounder. The histopathological investigations are of significant importance in view of possible routes of entry into the host and doses of ciliates that trigger fast infection for potential utility of drugs as a strategy for the control of P. dicentrarchi in farmed olive flounder.

  7. Are freshwater mixotrophic ciliates less sensitive to solar ultraviolet radiation than heterotrophic ones?

    Science.gov (United States)

    Sonntag, Bettina; Summerer, Monika; Sommaruga, Ruben

    2011-01-01

    We tested whether mixotrophic ciliates are more resistant to solar ultraviolet radiation (UVR) than heterotrophic ones because symbiotic algae can provide self-shading by cell matter absorption and eventually by direct UV screening from mycosporine-like amino acids (MAAs). Sensitivity of a natural assemblage to solar radiation was tested in experiments in the original lake and in a more UV transparent alpine lake after transplantation of the ciliates. In both lakes, the assemblage was exposed either to full sunlight, to photosynthetically active radiation only, or kept in the dark. In each lake, exposure was for 5 h at the surface and at the depth corresponding to the 10% attenuation depth at 320 nm. Overall, when the assemblage was exposed to surface UVR, only one out of four dominant mixotrophic ciliates, Vorticella chlorellata, was more resistant than heterotrophic species. The higher UV resistance in V. chlorellata was related to the presence of MAAs and the high percentage of ciliate volume occupied by algal symbionts. Our results indicate that effects of UVR were species-specific and depended on efficient screening of these wavelengths, but also on the depth preference of the ciliates and thus, on their previous exposure history to UVR.

  8. Are Freshwater Mixotrophic Ciliates Less Sensitive to Solar Ultraviolet Radiation than Heterotrophic Ones?1

    Science.gov (United States)

    SONNTAG, BETTINA; SUMMERER, MONIKA; SOMMARUGA, RUBEN

    2011-01-01

    We tested whether mixotrophic ciliates are more resistant to solar ultraviolet radiation (UVR) than heterotrophic ones because symbiotic algae can provide self-shading by cell matter absorption and eventually by direct UV screening from mycosporine-like amino acids (MAAs). Sensitivity of a natural assemblage to solar radiation was tested in experiments in the original lake and in a more UV transparent alpine lake after transplantation of the ciliates. In both lakes, the assemblage was exposed either to full sunlight, to photosynthetically active radiation only, or kept in the dark. In each lake, exposure was for 5 h at the surface and at the depth corresponding to the 10% attenuation depth at 320 nm. Overall, when the assemblage was exposed to surface UVR, only one out of four dominant mixotrophic ciliates, Vorticella chlorellata, was more resistant than heterotrophic species. The higher UV resistance in V. chlorellata was related to the presence of MAAs and the high percentage of ciliate volume occupied by algal symbionts. Our results indicate that effects of UVR were species-specific and depended on efficient screening of these wavelengths, but also on the depth preference of the ciliates and thus, on their previous exposure history to UVR. PMID:21414057

  9. Epithelial Cell Culture from Human Adenoids: A Functional Study Model for Ciliated and Secretory Cells

    Directory of Open Access Journals (Sweden)

    Claudia González

    2013-01-01

    Full Text Available Background. Mucociliary transport (MCT is a defense mechanism of the airway. To study the underlying mechanisms of MCT, we have both developed an experimental model of cultures, from human adenoid tissue of ciliated and secretory cells, and characterized the response to local chemical signals that control ciliary activity and the secretion of respiratory mucins in vitro. Materials and Methods. In ciliated cell cultures, ciliary beat frequency (CBF and intracellular Ca2+ levels were measured in response to ATP, UTP, and adenosine. In secretory cultures, mucin synthesis and secretion were identified by using immunodetection. Mucin content was taken from conditioned medium and analyzed in the presence or absence of UTP. Results. Enriched ciliated cell monolayers and secretory cells were obtained. Ciliated cells showed a basal CBF of 10.7 Hz that increased significantly after exposure to ATP, UTP, or adenosine. Mature secretory cells showed active secretion of granules containing different glycoproteins, including MUC5AC. Conclusion. Culture of ciliated and secretory cells grown from adenoid epithelium is a reproducible and feasible experimental model, in which it is possible to observe ciliary and secretory activities, with a potential use as a model to understand mucociliary transport control mechanisms.

  10. Involvement of Crawling and Attached Ciliates in the Aggregation of Particles in Wastewater Treatment Plants

    Directory of Open Access Journals (Sweden)

    Lucía Arregui

    2008-01-01

    Full Text Available The biological community in activated sludge wastewater plants is organized within this ecosystem as bioaggregates or flocs, in which the biotic component is embedded in a complex matrix comprised of extracellular polymeric substances mainly of microbial origin. The aim of this work is to study the role of different floc-associated ciliates commonly reported in wastewater treatment plants-crawling Euplotes and sessile Vorticella- in the formation of aggregates. Flocs, in experiments with ciliates and latex beads, showed more compactation and cohesion among particles than those in the absence of ciliates. Ciliates have been shown to contribute to floc formation through different mechanisms such as the active secretion of polymeric substances (extrusomes, their biological activities (movement and feeding strategies, or the cysts formation capacity of some species. Staining with lectins coupled to fluorescein showed that carbohydrate of the matrix contained glucose, manose, N-acetyl-glucosamine and galactose. Protein fraction revealed over the latex beads surfaces could probably be of bacterial origin, but nucleic acids represented an important fraction of the extracellular polymeric substances of ciliate origin.

  11. [Comparison of ciliate diversity in biodisc reactors which purify industrial wastewater].

    Science.gov (United States)

    Luna-Pabello, V M; Durán De Bazúa, C; Aladro-Lubel, M A

    1995-01-01

    The comparative study of the ciliate populations present in rotating biological reactors (biodiscs reactors) of 20 l working volume, treating three different wastewaters is the aim of this project. Wastewaters chosen were those of a maize mill, of a sugarcane/ethyl alcohol plant, and of a recycled paper mill. Its dissolved organic contents, measured as soluble chemical oxygen demand (COD) and five-day biochemical oxygen demand (BOD5), were 2040 mg COD/l and 585 mg BOD5/l for maize mill effluents (nejayote), 2000 mg COD/l and 640 mg BOD5/l for sugarcane/ethanol effluents (vinasses), and 960 mg COD/l and 120 mg BOD5/l for whitewaters of the paper industry. Results obtained indicate that ciliate proliferate in all chambers of reactors treating these wastewaters. The ciliates were more abundant in vinasses, followed by nejayote, and then whitewaters. Among protozoa, ciliates were present as follows: 19 species in total. Three of them were common for the three systems. Free swimming ciliates were in higher proportion than pedunculated ones. Its diversity was higher for the whitewaters system, next for nejayote, and the lesser, for vinasses, corroborating the fact that less polluted waters have higher organisms' diversity.

  12. Rumen ciliate protozoa of domestic sheep (Ovis aries) and goat (Capra aegagrus hircus) in Kyrgyzstan.

    Science.gov (United States)

    Gürelli, Gözde; Canbulat, Savaş; Aldayarov, Nurbek; Dehority, Burk A

    2016-03-01

    Species composition and concentration of rumen ciliate protozoa were investigated in the rumen contents of 14 domestic sheep and 1 goat living in Bishkek, Kyrgyzstan. This is the first report on rumen ciliates from ruminants living in Kyrgyzstan. In sheep 12 genera, 28 species and 12 morphotypes were detected, whereas in goat 8 genera, 12 species and 4 morphotypes were detected. The density of ciliates in sheep was (28.1 ± 20.0) × 10(4) cells mL(-1) and in goat was 37.0 × 10(4) cells mL(-1). Dasytricha ruminantium, Isotricha prostoma, Entodinium simulans and Ophryoscolex caudatus were major species (100%) in sheep, and for the first time, Diplodinium rangiferi was detected in a domestic goat.

  13. Efeito de reguladores de crescimento em uva apirênica, cv. BRS Clara Effect of growth regulators on the seedless grape cv. BRS Clara

    Directory of Open Access Journals (Sweden)

    Jair Costa Nachtigal

    2005-08-01

    Full Text Available O presente trabalho teve por objetivo verificar o efeito da aplicação de diferentes concentrações do ácido giberélico (AG3, do thidiazuron (TDZ e do forchlorfenuron (CPPU no aumento do tamanho dos cachos e das bagas e no teor de sólidos solúveis totais de uva sem semente, cv. BRS Clara. As plantas foram conduzidas no sistema de latada, sobre o porta-enxerto IAC 572, no espaçamento 2,5 x 2,0m e com irrigação por microaspersão. Os experimentos foram conduzidos na Estação Experimental de Viticultura Tropical, da Embrapa Uva e Vinho, em Jales-SP. Os reguladores de crescimento foram aplicados via pulverização localizada no cacho, utilizando-se de concentrações de 0 a 4mg.L-1 de CPPU; 0 a 10mg.L-1 de TDZ, e de 0 a 90mg.L-1 de AG3, isolados ou em conjunto. De modo geral, a aplicação dos reguladores de crescimento promove a melhoria da qualidade dos cachos da cv. BRS Clara; o uso do TDZ e do CPPU em conjunto com o AG3 produz um efeito sinérgico, proporcionando melhor resposta do que o uso isolado do AG3; os tratamentos com 60mg.L-1 de AG3; 20mg.L-1 de AG3 + 4mg.L-1 de CPPU, e 10mg.L-1 de AG3 + 5mg.L-1 de TDZ proporcionam os melhores resultados para o aumento do diâmetro das bagas; a aplicação de AG3 antes da floração da cv. BRS Clara provoca abortamento excessivo, reduzindo a qualidade comercial dos cachos; a utilização de concentrações elevadas dos reguladores reduz o teor de sólidos solúveis totais.The objective of this study was to evaluate the effect of different concentrations of gibberellic acid (AG3, thidiazuron (TDZ and forchlorfenuron (CPPU on the size of bunches and berries and on the total soluble solids content, when applied in different concentrations on the seedless grapes, cv. BRS Clara. The grapevines were grafted on the rootstock IAC 572, trained in the pergola system and, spaced 2.5 x 2.0m and irrigated by micro sprinklers. The experiments were carried out at the Embrapa Grape and Wine Experimental

  14. The Architectonics of Luna Clara e Apolo Onze: a Metalinguistic Reflection

    Directory of Open Access Journals (Sweden)

    Marice Fiuza Geletkanicz

    2013-11-01

    Full Text Available This paper proposes a metalinguistic reflection about the methodological process from which resulted a master's degree thesis entitled Luna Clara e Apolo Onze: a creative organization of voices. More specifically, it intends to show how, from the foundations of dialogical discourse analysis, and from a preliminary examination of the corpus, the book of Adriana Falcão entitled Luna Clara e Apolo Onze, the author of the research developed a specific way of describing the authorial architectonics of a verbal work which integrates visual resources. It intends still to consider how, in the context of the dialogic conception of language, one can propose an object of study, and a specific way of studying it by considering a phenomenon such as a book and examining it by means of concepts compatible with this object, instead of applying ready-made categories.

  15. Estimation of carbon sequestration by tree species in three farms in Villa Clara province

    Directory of Open Access Journals (Sweden)

    José Carlos García Hernández

    2016-03-01

    Full Text Available The research took place in two farms of the Cifuentes municipality and in a farm of the Santa Clara municipality, province of Villa Clara. It was carried out from November 2008 to May 2009, with the objective of estimating the capture of Carbon by common arboreal species in these farms. The plant biomass analyses were made according to the methodology of Mercadet and Álvarez (2005. Several parameters were analyzed. Age, height and perimeter of the plants were the most influential parameters on the amount of carbon sequestered. In this regard, we performed a multivariate curve fitting, showing the age of the plants the highest percent of dependence (54.89%. Palma Real with values between 0.81 and 0.84 t / plant and the Mango between 0.60 and 0.81 t /plant of retained Carbon, were the most outstanding in the capture of Carbon.

  16. Physical subdivision and description of the water-bearing sediments of the Santa Clara Valley, California

    Science.gov (United States)

    Wentworth, Carl M.; Jachens, Robert C.; Williams, Robert A.; Tinsley, John C.; Hanson, Randall T.

    2015-01-01

    A thick Quaternary alluvial section fills a sedimentary basin beneath the Santa Clara Valley, California, located within the San Andreas Fault system at the south end of San Francisco Bay. This section consists of an upper sequence about 1,000 feet thick containing eight sedimentary cycles and a lower fine-grained unit as thick as several hundred feet. Together these constitute the Quaternary Santa Clara Basin. The section overlies an irregular unconformity with more than 1,200 feet of relief cut into the underlying bedrock. This stratigraphy is determined through study of new wells and seismic reflection profiles, together with a sample of the many thousands of water wells in the valley. It represents a major change and improvement in understanding of the basin, particularly with regard to the upper cyclic sequence, which forms a large groundwater system that is an important resource in the San Francisco Bay region.

  17. Dealing with the presence of the ciliate Euplotes sp. in cultures of the copepod Acartia tonsa

    DEFF Research Database (Denmark)

    Drillet, Guillaume; Dutz, Jörg

    2014-01-01

    Ciliates in live feed cultures can be a pest that lower production yields. This could dramatically affect the management and success of copepod cultures. In this study, we investigated the effect of the ciliate Euplotes sp. on egg production, specific egg production and egg hatching success...... of Acartia tonsa fed with Rhodomonas salina. We found that at a concentration of 2 cells ml-1, Euplotes sp. had no effect on the production and hatching success of eggs but increased/decreased the mortality/quality of non-subitaneous eggs. Euplotes sp. had a good fatty acid profile containing high proportion...

  18. Evaluation of animal control measures on pet demographics in Santa Clara County, California, 1993–2006

    Directory of Open Access Journals (Sweden)

    Philip H. Kass

    2013-02-01

    Full Text Available The measurable benefits of animal control programs are unknown and the aim of this study was to determine the impact of these programs on pet population changes. A prospective cross-sectional study of 1000 households was implemented in 2005 to evaluate characteristics of the owned and unowned population of dogs and cats in Santa Clara County, California. The same population was previously studied 12 years earlier. During this time period, the county instituted in 1994 and then subsequently disestablished a municipal spay/neuter voucher program for cats. Dog intakes declined from 1992–2005, as they similarly did for an adjacent county (San Mateo. However, cat intakes declined significantly more in Santa Clara County than San Mateo, with an average annual decline of approximately 700 cats for the 12 year period. Time series analysis showed a greater than expected decline in the number of cats surrendered to shelters in Santa Clara County during the years the voucher program was in effect (1994–2005. The net savings to the county by reducing the number of cat shelter intakes was estimated at approximately $1.5 million. The measurable benefits of animal control programs are unknown and the aim of this study was to determine the impact of these programs on pet population changes.

  19. Evaluation of animal control measures on pet demographics in Santa Clara County, California, 1993-2006.

    Science.gov (United States)

    Kass, Philip H; Johnson, Karen L; Weng, Hsin-Yi

    2013-01-01

    The measurable benefits of animal control programs are unknown and the aim of this study was to determine the impact of these programs on pet population changes. A prospective cross-sectional study of 1000 households was implemented in 2005 to evaluate characteristics of the owned and unowned population of dogs and cats in Santa Clara County, California. The same population was previously studied 12 years earlier. During this time period, the county instituted in 1994 and then subsequently disestablished a municipal spay/neuter voucher program for cats. Dog intakes declined from 1992-2005, as they similarly did for an adjacent county (San Mateo). However, cat intakes declined significantly more in Santa Clara County than San Mateo, with an average annual decline of approximately 700 cats for the 12 year period. Time series analysis showed a greater than expected decline in the number of cats surrendered to shelters in Santa Clara County during the years the voucher program was in effect (1994-2005). The net savings to the county by reducing the number of cat shelter intakes was estimated at approximately $1.5 million. The measurable benefits of animal control programs are unknown and the aim of this study was to determine the impact of these programs on pet population changes.

  20. Power conversion and quality of the Santa Clara 2 MW direct carbonate fuel cell demonstration plant

    Energy Technology Data Exchange (ETDEWEB)

    Skok, A.J. [Fuel Cell Engineering Corp., Danbury, CT (United States); Abueg, R.Z. [Basic Measuring Instruments, Santa Clara, CA (United States); Schwartz, P. [Fluor Daniel, Inc., Irvine, CA (United States)] [and others

    1996-12-31

    The Santa Clara Demonstration Project (SCDP) is the first application of a commercial-scale carbonate fuel cell power plant on a US electric utility system. It is also the largest fuel cell power plant ever operated in the United States. The 2MW plant, located in Santa Clara, California, utilizes carbonate fuel cell technology developed by Energy Research Corporation (ERC) of Danbury, Connecticut. The ultimate goal of a fuel cell power plant is to deliver usable power into an electrical distribution system. The power conversion sub-system does this for the Santa Clara Demonstration Plant. A description of this sub-system and its capabilities follows. The sub-system has demonstrated the capability to deliver real power, reactive power and to absorb reactive power on a utility grid. The sub-system can be operated in the same manner as a conventional rotating generator except with enhanced capabilities for reactive power. Measurements demonstrated the power quality from the plant in various operating modes was high quality utility grade power.

  1. Effects of N-acetylcysteine on Clara cells in rats with cigarette smoke exposure

    Institute of Scientific and Technical Information of China (English)

    LIAO Ji-ping; CHI Chun-hua; LI Hai-chao; TANG Xiu-ying

    2010-01-01

    Background The number of Clare cells and the Clara cell 16-kDa protein (CC16) levels of the lung decrease in patients with chronic obstructive pulmonary disease (COPD). N-acetylcysteine (NAC) is a powerful antioxidant and can reduce the frequency of acute exacerbations of COPD. But the exact mechanism is unclear. The present study was designed to investigate the effects of NAC on Clara cells in rats with cigarette smoke exposure.Methods Eighteen adult male Wistar rats were randomly divided into 3 groups, 12 exposed to cigarette smoke (CS) thrice a day, 10 cigarettes for 30 minutes each time for 1 week, without (CS group) or with (CS+NAC group) oral intake of NAC 80 mg·kg~(-1)·d~(-1), and another 6 rats exposed to fresh air (control group). Clara cells were observed by an electron microscope. The Mrna expression of CC16 and CC16 protein in lungs were determined by reverse transcription polymerase chain reaction (RT-PCR) and immunohistochemistry respectively. The glutathion (GSH) level in plasma and lung tissue were tested by fluorimetry assay.Results Compared with the controls, the pathologic score of small airways significantly increased in the CS exposed rats (20.3±14.7 vs. 53.7±11.5, P 0.05). No significant difference was found in the expression of CC16 Mrna among the three groups. Correlation analysis indicated that the percentage of CC16-positive cells in bronchioles negatively correlated with the pathologic score of small airways (r=-0.592, P<0.05), but not with GSH level.Conclusions One-week CS exposure decreased the number of Clara cells and the expression of CC16 in bronchioles in rats. NAC might provide protection of the Clara cells from oxidative damage and possibly through the elevation of the synthesis and secretion of CC16. These data indicate that NAC decreases airway inflammation induced by CS via induction of CC16.

  2. Crescimento e desenvolvimento de frutos do tomateiro 'Santa Clara' e do seu mutante natural 'Firme' Growth and development of 'Santa Clara' tomato fruit and its mutant 'Firme'

    Directory of Open Access Journals (Sweden)

    Marcia Lima Moura

    2004-12-01

    Full Text Available Na região produtora de hortaliças de Viçosa, MG, identificaram-se plantas de tomate da cv. Santa Clara (Lycopersicon esculentum Mill., que apresentam senescência foliar precoce e estigmas amarelados, com frutos de coloração "amarelo-creme" quando imaturos e vermelho quando maduros, de maturação lenta, e mais firmes que o fenótipo normal. Objetivou-se com este trabalho avaliar o crescimento e desenvolvimento dos frutos normais e mutantes. O delineamento experimental foi de blocos casualizados com quatro repetições. Os frutos mutantes apresentaram matéria fresca total e diâmetro transversal e longitudinal menores do que o normal durante todo o seu desenvolvimento. A espessura do pericarpo foi significativamente menor nos frutos mutantes do que nos frutos normais, a partir dos 21 dias após a antese. Folhas medianas e basais de plantas mutantes apresentaram menores teores de clorofila do que o observado em plantas normais. O período de amadurecimento do fruto mutante foi de 14 dias, enquanto dos frutos normais foi de 7 dias, quando ligados à planta-mãe, demonstrando a maior longevidade dos frutos mutantes. Além disso, os frutos mutantes apresentaram atraso na elevação da produção de etileno durante o amadurecimento.'Santa Clara' tomato (Lycopersicon esculentum Mill. plants showing earlier leaf senescence and yellowish stigma, fruits with pale yellow when immature and red when reach full ripe stage, associated to a lower rate of ripening and firmer than the wild type, were found in Viçosa, MG. The objective of this study was to evaluate the fruit growth and development of the mutant and wild type tomatoes. Mutant fruits showed smaller total fresh weight than wild type throughout development and thinner pericarp after 21 days after flowering. Basal and intermediate mutant plant leaves showed lower chlorophyll levels. 'Santa Clara' fruit took 7 days to reach full red ripe stage, while mutant fruits took 14 days. Furthermore

  3. Fisiologia do amadurecimento na planta do tomate 'Santa Clara' e do mutante 'Firme' Physiology of vine-ripened tomato 'Santa Clara' and its mutant 'Firme'

    Directory of Open Access Journals (Sweden)

    Márcia Lima Moura

    2005-03-01

    Full Text Available O mutante natural de tomate 'Firme' da cv. Santa Clara tem frutos com coloração "amarelo-creme" quando imaturos, firmes e com amadurecimento lento. Estudou-se as alterações fisiológicas que ocorrem durante o processo de amadurecimento na planta de frutos de tomate da cv. Santa Clara e do mutante 'Firme'. Os frutos normais e mutantes foram colhidos em 6 diferentes estádios de maturidade, e em cada um deles foram avaliados a produção de etileno e CO2, os teores de açúcares solúveis totais do pericarpo e do tecido locular, e as atividades das enzimas oxidase do ACC e poligalacturonase. Os frutos mutantes apresentaram menores taxas respiratórias e de produção de etileno em todos os estádios de maturidade. A atividade da oxidase do ACC apresentou padrão de comportamento distinto durante o amadurecimento na planta dos frutos mutantes e normais, porém com semelhante atividade final. Os frutos mutantes apresentaram atraso no aumento da atividade da enzima poligalacturonase em relação aos frutos normais nas fases iniciais do amadurecimento. Frutos normais acumularam açúcares solúveis totais durante seu amadurecimento na planta, enquanto que nos frutos mutantes os teores foram inferiores nos estádios mais avançados do amadurecimento quando comparados com aqueles no início do climatério. O pericarpo dos frutos mutantes nos estádios mais avançados do amadurecimento teve teores de açúcares total inferiores.The natural tomato mutant 'Firme' from cv. Santa Clara presents a yellow-pale appearance when immature, firm texture and slow ripening. Some of the physiological changes throughout ripening of cv. Santa Clara and the natural mutant 'Firme' were evaluated on the vine. Fruit ethylene and CO2 production, locular and outer pericarp total soluble sugars content, ACC oxidase and poligalacturonase activities were evaluated in both genotypes at six maturity stages. Mutant fruits presented lower ethylene and CO2 production at all

  4. Ciliate ingestion and digestion: flow cytometric measurements and regrowth of a digestion-resistant campylobacter jejuni

    Science.gov (United States)

    We developed a method to measure ingestion and digestion rates of bacterivorous protists feeding on pathogenic bacteria. We tested this method using the enteric bacteria Campylobacter jejuni and a freshwater colpodid ciliate. Campylobacter and a non-pathogenic bacteria isolated from the environment ...

  5. Experimental identification and analysis of macronuclear non-coding RNAs from the ciliate Tetrahymena thermophila

    DEFF Research Database (Denmark)

    Andersen, Kasper Langebjerg; Nielsen, Henrik

    2012-01-01

    The ciliate Tetrahymena thermophila is an important eukaryotic model organism that has been used in pioneering studies of general phenomena, such as ribozymes, telomeres, chromatin structure and genome reorganization. Recent work has shown that Tetrahymena has many classes of small RNA molecules ...

  6. Modeling the distribution of ciliate protozoa in the reticulo-rumen using linear programming

    NARCIS (Netherlands)

    Hook, S.E.; Dijkstra, J.; Wright, A.G.; McBride, B.W.; France, J.

    2012-01-01

    The flow of ciliate protozoa from the reticulo-rumen is significantly less than expected given the total density of rumen protozoa present. To maintain their numbers in the reticulo-rumen, protozoa can be selectively retained through association with feed particles and the rumen wall. Few mathematic

  7. Ciliated protozoa community of a combined UASB-activated sludge system in southeastern Brazil.

    Science.gov (United States)

    Siqueira-Castro, Isabel Cristina Vidal; Greinert-Goulart, Juliane Araújo; Rossetto, Renato; Guimarães, José Roberto; Franco, Regina Maura Bueno

    2016-12-01

    The aims of the present study were (1) to evaluate the abundance and taxonomic composition of ciliated protozoa in the activated sludge of a full-scale combined anaerobic-aerobic system operating in a tropical country and (2) to study the relationship between the effluent quality, the physicochemical variables, and the ciliates present in the operating system. The total ciliate fauna of the activated sludge of the Piçarrão Wastewater Treatment Plant (Piçarrão WWTP) was composed of 36 morphospecies belonging to 33 genera. These included 21 species observed in the activated sludge samples on the day of collection and 15 species found in cultures. The activated sludge of the Piçarrão WWTP contained a diversified ciliate community composed mainly of indicator organisms. The most frequently occurring morphospecies were Aspidisca cicada, Vorticella spp., Gastronauta aloisi, Acineria uncinata, and Epistylis plicatilis complex. These results showed that satisfactory operating conditions prevailed at the Piçarrão WWTP. In the combined UASB-activated sludge system, the presence of Aspidisca cicada suggests the occurrence of denitrification in the process while the presence of Acineria uncinata and G. alosi indicates the removal of carbonaceous organic matter.

  8. Cycloheptaamylose-dansyl chloride complex as a fluorescent label of surface membranes in living ciliates.

    Science.gov (United States)

    Wyroba, E; Bottiroli, G; Giordano, P

    1981-12-01

    Labelling of surface membrane of living ciliates: Paramecium aurelia and Tetrahymena pyriformis with fluorescent compound--cycloheptaamylose-dansyl chloride complex (CDC) has been achieved. Fluorescence micrographs of the dried samples showed specific localization of CDC on the cell membrane without any intracellular penetration. On the contrary the ciliates which have been dead during labelling revealed a non-specific fluorescence of their whole bodies. Microspectrofluorimetric analysis of labelled Paramecium cells was performed with Leitz microspectrograph. Spectrum of fluorescence emission measured over the cell membrane level had maximum at 450 nm. Strikingly, the emission maximum of the cells dead at the moment of labelling was shifted 10 nm to a longer wavelength. The rate of photofading measured in this case was almost 3-fold higher than for the ciliates labelled as living ones. Fluorescence excitation spectra did not show any difference in the peak position. Thus CDC staining appears to be an useful method of supravital labelling of cell surface enabling also to distinguish--on the basis of spectral characteristics--the ciliates being alive from those dead at the moment of fluorochrome binding.

  9. Effects of histamine on ciliary beat frequency of ciliated cells from guinea pigs nasal mucosa.

    Science.gov (United States)

    An, Fengwei; Xing, Lijun; Zhang, Zhiqiang; Chen, Lei

    2015-10-01

    We aimed to investigate the effect of histamine on ciliary beat frequency (CBF) through combining high-speed digital microscopy and patch-clamp technology. Ciliated cells were obtained from septum and turbinate of 90-120-day-old healthy male guinea pigs. Tight seal was formed by applying negative pressure on the glass electrode after the drawing and pushing progress. Then, we enrolled high-speed digital microscopy to measure CBF before and after treatment with histamine of different concentrations ranging from 10(-6) to 10(-1) mol/L in Hank's solution and D-Hank's solution as well as after administrating adenosine triphosphate. One-way ANOVA, Student's t test or Kruskal-Wallis test was used for statistical comparisons. Glass electrode fix up ciliated cell is available at tip diameter of 2-5 μm and negative pressure of 10-20 cmH2O column. The baseline CBF in Hank's solution was higher than in D-Hank's solution. Treatment with 10(-6)-l0(-3) mol/L histamine of concentrations can stimulate a rise of CBF. Nevertheless, CBF in all groups decreased to baseline CBF within 20 min. Generally, 10(-2) mol/L histamine can stimulate a rise of CBF; meanwhile, the high concentration of histamine killed 50% ciliated cell. Histamine at 10(-1) mol/L killed all ciliated cells. Ciliary beating activity decreased in Ca(2+)-free solution. Moreover, adenosine triphosphate could increase CBF effectively after the stimulation effect of histamine. We construct an effective technology integrating patch-clamp technique with CBF measurements on ciliated cells. Extracellular histamine stimulation could increase CBF effectively.

  10. Bose-Einstein condensates form in heuristics learned by ciliates deciding to signal 'social' commitments.

    Science.gov (United States)

    Clark, Kevin B

    2010-03-01

    Fringe quantum biology theories often adopt the concept of Bose-Einstein condensation when explaining how consciousness, emotion, perception, learning, and reasoning emerge from operations of intact animal nervous systems and other computational media. However, controversial empirical evidence and mathematical formalism concerning decoherence rates of bioprocesses keep these frameworks from satisfactorily accounting for the physical nature of cognitive-like events. This study, inspired by the discovery that preferential attachment rules computed by complex technological networks obey Bose-Einstein statistics, is the first rigorous attempt to examine whether analogues of Bose-Einstein condensation precipitate learned decision making in live biological systems as bioenergetics optimization predicts. By exploiting the ciliate Spirostomum ambiguum's capacity to learn and store behavioral strategies advertising mating availability into heuristics of topologically invariant computational networks, three distinct phases of strategy use were found to map onto statistical distributions described by Bose-Einstein, Fermi-Dirac, and classical Maxwell-Boltzmann behavior. Ciliates that sensitized or habituated signaling patterns to emit brief periods of either deceptive 'harder-to-get' or altruistic 'easier-to-get' serial escape reactions began testing condensed on initially perceived fittest 'courting' solutions. When these ciliates switched from their first strategy choices, Bose-Einstein condensation of strategy use abruptly dissipated into a Maxwell-Boltzmann computational phase no longer dominated by a single fittest strategy. Recursive trial-and-error strategy searches annealed strategy use back into a condensed phase consistent with performance optimization. 'Social' decisions performed by ciliates showing no nonassociative learning were largely governed by Fermi-Dirac statistics, resulting in degenerate distributions of strategy choices. These findings corroborate

  11. De novo transcriptomes of a mixotrophic and a heterotrophic ciliate from marine plankton.

    Directory of Open Access Journals (Sweden)

    Luciana F Santoferrara

    Full Text Available Studying non-model organisms is crucial in the context of the current development of genomics and transcriptomics for both physiological experimentation and environmental characterization. We investigated the transcriptomes of two marine planktonic ciliates, the mixotrophic oligotrich Strombidium rassoulzadegani and the heterotrophic choreotrich Strombidinopsis sp., and their respective algal food using Illumina RNAseq. Our aim was to characterize the transcriptomes of these contrasting ciliates and to identify genes potentially involved in mixotrophy. We detected approximately 10,000 and 7,600 amino acid sequences for S. rassoulzadegani and Strombidinopsis sp., respectively. About half of these transcripts had significant BLASTP hits (E-value <10-6 against previously-characterized sequences, mostly from the model ciliate Oxytricha trifallax. Transcriptomes from both the mixotroph and the heterotroph species provided similar annotations for GO terms and KEGG pathways. Most of the identified genes were related to housekeeping activity and pathways such as the metabolism of carbohydrates, lipids, amino acids, nucleotides, and vitamins. Although S. rassoulzadegani can keep and use chloroplasts from its prey, we did not find genes clearly linked to chloroplast maintenance and functioning in the transcriptome of this ciliate. While chloroplasts are known sources of reactive oxygen species (ROS, we found the same complement of antioxidant pathways in both ciliates, except for one enzyme possibly linked to ascorbic acid recycling found exclusively in the mixotroph. Contrary to our expectations, we did not find qualitative differences in genes potentially related to mixotrophy. However, these transcriptomes will help to establish a basis for the evaluation of differential gene expression in oligotrichs and choreotrichs and experimental investigation of the costs and benefits of mixotrophy.

  12. Epidemiological and ecological characteristics of past dengue virus infection in Santa Clara, Peru.

    Science.gov (United States)

    Reiskind, M H; Baisley, K J; Calampa, C; Sharp, T W; Watts, D M; Wilson, M L

    2001-03-01

    To determine risk factors associated with dengue (DEN) virus infection among residents of Santa Clara, Peru, a rural Amazonian village near Iquitos, a cross-sectional serological, epidemiological and environmental survey was conducted. Demographic, social and behavioural information was obtained by standardized questionnaire from 1225 Santa Clara residents (61.3%) aged 5 years or older. Additional data were obtained on the environmental variables and immature mosquito species and abundance surrounding each household (n = 248). Sera that had been collected previously by the Peruvian Ministry of Health from residents were tested by an enzyme-linked immunosorbent assay (ELISA) for DEN virus IgG antibody. Antibody identity was verified as DEN by plaque reduction neutralization test. Data on individuals were analysed by univariate and multivariable methods, and independent sample t-tests. Spatial clustering was evaluated by comparing distances among DEN positive households. Overall, antibody prevalence was 29.4 % and more than doubled from the youngest to the oldest age groups, but did not differ by sex. Curiously, length of residence in Santa Clara was negatively associated with DEN virus antibodies. More frequent travel to Iquitos was positively associated with seroprevalence. Residents who obtained water from a river source rather than a local well also had significantly higher antibody prevalence. None of the environmental variables measured at each household corresponded to the patterns of antibody distribution. Of the larval mosquitoes found around residences, all were determined to be species other than Aedes. No evidence of spatial autocorrelation among antibody-positive households was detected. These results strongly suggested that recent DEN virus transmission did not occur in the village and that most infections of residents of this rural village were acquired while visiting the city of Iquitos.

  13. Colonization of periphytic ciliated protozoa on an artificial substrate in mariculture waters with notes on responses to environmental factors

    Institute of Scientific and Technical Information of China (English)

    Jiqiu Li; Henglong Xu; Xiaofeng Lin; Weibo Song

    2009-01-01

    Colonization of periphytic ciliates and their usefulness for monitoring water quality were evaluated using the glass slide method in two enclosed mariculture ponds used to culture crab larva and in a natural seawater reservoir. The results revealed that (1) the ciliate species composition and colonizing process differed between the culturing ponds and the natural reservoir and (2) the dominant ciliate species showed a greater distribution in terms of both the abundance and the occurrence frequency. This study also demonstrated that structural parameters were strongly related to water conditions. For example, the abundance was positively associated with NO-3-N and soluble reactive phosphate (P < 0.05), whereas the species number, species diversity and evenness were negatively correlated with nutrients (e.g. NO-3N and NH3-N) and temperature (P < 0.05). These findings support the evidence that periphytic ciliates are useful bioindicators of water quality in enclosed mariculture ecosystems.

  14. Bioaccumulation of selenium (Se) in the Cienega de Santa Clara wetland, Sonora, Mexico.

    Science.gov (United States)

    García-Hernández, J; Glenn, E P; Artiola, J; Baumgartner, D J

    2000-07-01

    The Cienega de Santa Clara, on the east side of the Colorado River delta, is a brackish wetland supported by agricultural drainage water from the United States that provides habitat for endangered fish and bird species. Bioaccumulation of selenium has created toxicity problems for wildlife in similar wetlands in the United States. This is the first selenium survey in the Cienega de Santa Clara. Ten sites were selected to collect water (dissolved), sediments (total), plants, invertebrates, and fish. Samples were collected from October 1996 to March 1997. Selenium was detected in all samples. Concentrations in water ranged from 5 to 19 microg/L and increased along a salinity gradient. Although water levels of selenium exceeded EPA criterion for protection of wildlife, levels in sediments (0.8-1.8 mg/kg), aquatic plants (0.03-0.17 mg/kg), and fish (2.5-5.1 mg/kg whole body, dry wt) did not exceed USFWS recommended levels. It is concluded from this study that the levels of selenium in water did not affect the overall health of the fish sampled. Therefore, it is important to maintain or improve the water quality entering this wetland to continue to have normal levels of Se in the food chain components.

  15. Phenolic composition of the Brazilian seedless table grape varieties BRS Clara and BRS Morena.

    Science.gov (United States)

    Lago-Vanzela, Ellen Silva; Da-Silva, Roberto; Gomes, Eleni; García-Romero, Esteban; Hermosín-Gutiérrez, Isidro

    2011-08-10

    The detailed phenolic composition (anthocyanins, flavonols, hydroxycinnamic acid derivatives, stilbenes, and flavan-3-ols) in the skin and flesh of the new BRS Clara and BRS Morena seedless table grapes has been studied using HPLC-DAD-ESI-MS/MS. The two grapes, especially BRS Morena, contained high amounts of phenolic compounds, mainly located in their skins and qualitatively not different from those found in Vitis vinifera grapes. In addition, BRS Morena (a teinturier variety) showed qualitatively different phenolic compositions in its skin and flesh, mainly affecting the anthocyanin and flavonol profiles. Consistent with high phenolic contents, high antioxidant capacity values were registered for both grape varieties, especially for BRS Morena. Proanthocyanidins and hydroxycinnamoyl-tartaric acids were the major phenolic compounds found in BRS Clara and were also important in BRS Morena, although anthocyanins were the main phenolic compounds in the latter case. These results suggest that the entire grapes, including the skin, may potentially possess properties that are beneficial to human health. In this context, the BRS Morena grape can be considered as a high resveratrol producer.

  16. Santa Clara Valley water district multi-aquifer monitoring-well site, Coyote Creek Outdoor Classroom, San Jose, California

    Science.gov (United States)

    Hanson, R.T.; Newhouse, M.W.; Wentworth, C.M.; Williams, C.F.; Noce, T.E.; Bennett, M.J.

    2002-01-01

    The U.S. Geological Survey (USGS), in cooperation with the Santa Clara Valley Water District (SCVWD), has completed the first of several multiple-aquifer monitoring-well sites in the Santa Clara Valley. This site monitors ground-water levels and chemistry in the one of the major historic subsidence regions south of San Jose, California, at the Coyote Creek Outdoor Classroom (CCOC) (fig. 1) and provides additional basic information about the geology, hydrology, geochemistry, and subsidence potential of the upper- and lower-aquifer systems that is a major source of public water supply in the Santa Clara Valley. The site also serves as a science education exhibit at the outdoor classroom operated by SCVWD.

  17. Molecular evidence that phylogenetically diverged ciliates are active in microbial mats of deep-sea cold-seep sediment.

    Science.gov (United States)

    Takishita, Kiyotaka; Kakizoe, Natsuki; Yoshida, Takao; Maruyama, Tadashi

    2010-01-01

    Cold seeps are areas of the seafloor where hydrogen sulfide- and methane-rich fluid seepage occurs, often sustaining chemosynthetic ecosystems. It is well known that both archaea and bacteria oxidize sulfides and methane to produce chemical energy and that several endemic animals use this energy to thrive in cold seeps. On the other hand, there is little knowledge regarding diversity and ecology of microbial eukaryotes in this ecosystem. In this study we isolated environmental RNA and DNA from microbial mats of cold-seep sediment in Sagami Bay, Japan, and retrieved eukaryotic small-subunit ribosomal RNA sequences with polymerase chain reaction methods followed by clone library construction. Most RNA-derived clones obtained were from ciliates, although DNA-derived clones were mainly from the fungus Cryptococcus curvatus, suggesting that ciliates are active in the environment. The ciliate sequences were phylogenetically diverse, and represented eight known class lineages as well as undesignated lineages. Because most ciliates are bacterivorous, it is highly likely that the ciliates for which sequences were recovered play a role in the food web of this ecosystem as grazers of microbial mats. In addition, given that the environment studied is under highly reduced (anoxic) conditions, based on the prokaryotic community structure deduced from T-RFLP profiles, the ciliates detected may be obligatory or facultative anaerobes.

  18. Horizontal gene transfer from Bacteria to rumen Ciliates indicates adaptation to their anaerobic, carbohydrates-rich environment

    Directory of Open Access Journals (Sweden)

    Takenaka Akio

    2006-02-01

    Full Text Available Abstract Background The horizontal transfer of expressed genes from Bacteria into Ciliates which live in close contact with each other in the rumen (the foregut of ruminants was studied using ciliate Expressed Sequence Tags (ESTs. More than 4000 ESTs were sequenced from representatives of the two major groups of rumen Cilates: the order Entodiniomorphida (Entodinium simplex, Entodinium caudatum, Eudiplodinium maggii, Metadinium medium, Diploplastron affine, Polyplastron multivesiculatum and Epidinium ecaudatum and the order Vestibuliferida, previously called Holotricha (Isotricha prostoma, Isotricha intestinalis and Dasytricha ruminantium. Results A comparison of the sequences with the completely sequenced genomes of Eukaryotes and Prokaryotes, followed by large-scale construction and analysis of phylogenies, identified 148 ciliate genes that specifically cluster with genes from the Bacteria and Archaea. The phylogenetic clustering with bacterial genes, coupled with the absence of close relatives of these genes in the Ciliate Tetrahymena thermophila, indicates that they have been acquired via Horizontal Gene Transfer (HGT after the colonization of the gut by the rumen Ciliates. Conclusion Among the HGT candidates, we found an over-representation (>75% of genes involved in metabolism, specifically in the catabolism of complex carbohydrates, a rich food source in the rumen. We propose that the acquisition of these genes has greatly facilitated the Ciliates' colonization of the rumen providing evidence for the role of HGT in the adaptation to new niches.

  19. The bacterivory of interstitial ciliates in association with bacterial biomass and production in the hyporheic zone of a lowland stream.

    Science.gov (United States)

    Königs, Sascha; Cleven, Ernst-Josef

    2007-07-01

    Rates of bacteria ingestion by interstitial ciliates were estimated and compared to bacterial biomass and production. Investigation was carried out in the hyporheic zone of a lowland stream. FISH was applied to quantitatively determine bacteria within the ciliate's food vacuoles. To estimate bacteria ingestion rates using FISH, we had to strike a new path. When numbers of bacteria in the food vacuoles remains constant with time (bacterial digestion and ingestion are at equilibrium), ingestion rate can be estimated based on the digestion time and the average number of bacteria per cell. Ciliate community was predominantly composed of bacterivorous ciliates. FISH-signals deriving from ingested bacteria were detected in Cinetochilum margaritaceum, 'other small scuticociliates', Pleuronema spp., and Vorticella spp. Ingestion rates for these taxa were 78, 150, 86, and 38 bacteria ind(-1) h(-1), respectively. The grazing impacts on bacterial biomass and carbon production were calculated based on these ingestion rates. Ciliate grazing caused a decrease in bacterial biomass of 0.024% day(-1) and in bacterial carbon production of 1.60%. These findings suggest that interstitial ciliate grazing impact on bacteria biomass and production was too low to represent an important link in the carbon flow of the hyporheic zone under study.

  20. Ciliates and their picophytoplankton-feeding activity in a high-altitude warm-monomictic saline lake.

    Science.gov (United States)

    Pestová, Dana; Macek, Miroslav; Elena Martínez Pérez, María

    2008-02-01

    The impact of feeding on autotrophic picoplankton (APP) on the ciliate composition of the assemblage was surveyed monthly along a depth gradient in the maar crater, athalassohaline, warm monomictic Lake Alchichica (Puebla, Mexico) from June 2003 to December 2005. Numbers of APP were evaluated from their autofluorescence. DAPI staining and the Fluorescently Labeled Bacteria technique were employed to count ciliates and estimate their feeding rates. A total of 38 taxa of ciliates have been identified using Quantitative Protargol Staining. Peritrichs followed by minute spirotrichs (particularly Halteria grandinella) often numerically dominated the ciliate assemblage and emerged as the most efficient APP feeders. A maximum of 54 ciliate cells ml(-1) was observed in the surface layer at the end of the mixing period, during the development of diatoms (Cyclotella alchichicana), the cyanobacterial bloom (Nodularia sp.) and its decay. Vorticellids (Pelagovorticella natans, Vorticella sp.) had the highest APP uptake (median 130 APP cil(-1) h(-1)). Mixotrophic Euplotes cf. daidaleos were important APP grazers near the oxycline. Scuticociliates (Cyclidium glaucoma, Uronema nigricans and an anaerobic cf. Isocyclidium globossum), were numerically dominant within the hypolimnetic assemblages and did not ingest APP. Generally, APP were not an important food source for the majority of the ciliate assemblage, being positively selected by a few species during the APP decay in aerobic and microaerobic conditions.

  1. Horizontal gene transfer from Bacteria to rumen Ciliates indicates adaptation to their anaerobic, carbohydrates-rich environment

    Science.gov (United States)

    Ricard, Guénola; McEwan, Neil R; Dutilh, Bas E; Jouany, Jean-Pierre; Macheboeuf, Didier; Mitsumori, Makoto; McIntosh, Freda M; Michalowski, Tadeusz; Nagamine, Takafumi; Nelson, Nancy; Newbold, Charles J; Nsabimana, Eli; Takenaka, Akio; Thomas, Nadine A; Ushida, Kazunari; Hackstein, Johannes HP; Huynen, Martijn A

    2006-01-01

    Background The horizontal transfer of expressed genes from Bacteria into Ciliates which live in close contact with each other in the rumen (the foregut of ruminants) was studied using ciliate Expressed Sequence Tags (ESTs). More than 4000 ESTs were sequenced from representatives of the two major groups of rumen Cilates: the order Entodiniomorphida (Entodinium simplex, Entodinium caudatum, Eudiplodinium maggii, Metadinium medium, Diploplastron affine, Polyplastron multivesiculatum and Epidinium ecaudatum) and the order Vestibuliferida, previously called Holotricha (Isotricha prostoma, Isotricha intestinalis and Dasytricha ruminantium). Results A comparison of the sequences with the completely sequenced genomes of Eukaryotes and Prokaryotes, followed by large-scale construction and analysis of phylogenies, identified 148 ciliate genes that specifically cluster with genes from the Bacteria and Archaea. The phylogenetic clustering with bacterial genes, coupled with the absence of close relatives of these genes in the Ciliate Tetrahymena thermophila, indicates that they have been acquired via Horizontal Gene Transfer (HGT) after the colonization of the gut by the rumen Ciliates. Conclusion Among the HGT candidates, we found an over-representation (>75%) of genes involved in metabolism, specifically in the catabolism of complex carbohydrates, a rich food source in the rumen. We propose that the acquisition of these genes has greatly facilitated the Ciliates' colonization of the rumen providing evidence for the role of HGT in the adaptation to new niches. PMID:16472398

  2. INCIDENCIA DE CARDIOPATÍAS DURANTE EL EMBARAZO EN LA PROVINCIA DE VILLA CLARA / Incidence of heart disease during pregnancy in Villa Clara province

    Directory of Open Access Journals (Sweden)

    Marilín C. Luna Alonso

    2012-07-01

    Full Text Available ResumenIntroducción y objetivos: Las enfermedades cardiovasculares constituyen la cuarta causa de muerte durante el período gravídico-puerperal, y un indicador de morbilidad y mortalidad para el producto de la concepción. El objetivo de esta investigación fue determinar el comportamiento de la cardiopatía en la embarazada, su atención médica y evolución durante y al final del embarazo. Método: Se realizó un estudio descriptivo, prospectivo, donde se analizaron 283 gestantes con diagnóstico de cardiopatía, atendidas en el Hospital Universitario Gineco-Obstétrico "Mariana Grajales" de Santa Clara, Villa Clara, en el período 2008-2010. La información se obtuvo mediante la revisión de las historias clínicas individuales, interrogatorio, examen físico completo, así como pruebas complementarias para establecer o confirmar el diagnóstico. Resultados: Se obtuvo una incidencia de 17,2 cardiopatías por cada mil gestantes y en el 59,7 % de ellas, la cardiopatía era adquirida; el prolapso valvular mitral fue la más frecuente (45 %. De las congénitas, el 36,8 % se trataba de una comunicación interauricular. Se utilizó antibioprofilaxis en el 96,8 % de las embarazadas y en el 96,1 % de ellas se mantuvo un seguimiento médico. El 92,6 % tenía clase funcional I y 4,6 % presentó complicación por su enfermedad. El 77,4 % parió entre las 37 y 42 semanas, y el 82,7 % tuvo parto eutócico. Conclusiones: Las gestantes cardiópatas fueron más frecuentes en edades entre 20 y 29 años, con predominio de las que no habían parido, captación entre las 13 y 24 semanas, y cardiopatías adquiridas. La atención médica que prevaleció fue la antibioprofilaxis y el seguimiento médico con evolución final del embarazo satisfactoria. / AbstractIntroduction and Objectives: Cardiovascular diseases are the fourth leading cause of death during the gravid-puerperal period, and an indicator of morbidity and mortality for the product of conception

  3. Caballos de tracción de la ciudad de Santa Clara, Cuba. III Glicemia y electrolitros (Traction horses of Santa Clara city, Cuba. III Glycaemia electrolytes

    Directory of Open Access Journals (Sweden)

    Julio César Castillo Cuenca

    2007-07-01

    Full Text Available Se realizó un estudio de bioquímica sanguínea glicemia y electrolitos (Na, K, Ca, Mg en 100 caballos machos castrados seleccionados al azar utilizados en el transporte local de pasajeros en la ciudad de Santa Clara, Cuba. La sangre se extrajo directamente de la yugular determinándose la glicemia mediante la técnica de la glucosa oxidasa y los electrolitos por espectrofotometría de absorción atómica. El análisis estadístico reveló diferencias altamente significativas al comparar los valores medios obtenidos de la glucosa y los electrolitos con los correspondientes a la media referencial para la especie. Exceptuando el potasio, en el resto de los parámetros la media real fue inferior a la referencial, aunque en todos los casos, estos valores se encuentran dentro del rango planteado. Los equinos están sometidos a un trabajo exhaustivo y prolongado, que afecta el correcto funcionamiento de su organismo y el incremento de la concentración de iones potasio en el plasma es un buen indicador del esfuerzo físico a que son sometidos los animales.

  4. Analysis of the radioactivity in the 'Elguea' spa, Villa Clara, Cuba; Analisis de la radiactividad en el balneario 'Elguea' , Villa Clara, Cuba

    Energy Technology Data Exchange (ETDEWEB)

    Fernandez G, I.M.; Zerquera, J.T.; Carrazana G, J.; Capote F, E.; Rodriguez C, G. [CPHR, La Habana (Cuba)]. e-mail: isis@cphr.edu.cu

    2006-07-01

    The 'Elguea' spa, located in the north coast of the county of Villa Clara, Cuba, is considered one of those more important spas of Latin America. The waters of this spa are rich in salts of chlorine, sodium, bromine, sulfides and its contain radon. As a result of measurements of environmental gamma dose rates carried out in the area of the spa, its were considered levels of dose between 0.13 and 2.3 mSv. The obtained results motivated that it was carried out a characterization, from the radiological point of view, of the spa. This characterization is of supreme importance to be able to evaluate the impact that it has and the discharges of its waters on the environment, as well as, those dose that the population potentially affected can receive by these discharges. With this end its were carried out quantitative determinations of those existent natural more significant radionuclides in different environmental objects coming from the area of the spa and its surroundings, as well as one characterization gamma 'in situ' of the same one. The obtained results are present in this work. (Author)

  5. Developing and Integrating Advanced Movement Features Improves Automated Classification of Ciliate Species.

    Directory of Open Access Journals (Sweden)

    Ali Soleymani

    Full Text Available Recent advances in tracking technologies such as GPS or video tracking systems describe the movement paths of individuals in unprecedented details and are increasingly used in different fields, including ecology. However, extracting information from raw movement data requires advanced analysis techniques, for instance to infer behaviors expressed during a certain period of the recorded trajectory, or gender or species identity in case data is obtained from remote tracking. In this paper, we address how different movement features affect the ability to automatically classify the species identity, using a dataset of unicellular microbes (i.e., ciliates. Previously, morphological attributes and simple movement metrics, such as speed, were used for classifying ciliate species. Here, we demonstrate that adding advanced movement features, in particular such based on discrete wavelet transform, to morphological features can improve classification. These results may have practical applications in automated monitoring of waste water facilities as well as environmental monitoring of aquatic systems.

  6. Necessity Is the Mother of Invention: Ciliates, Transposons, and Transgenerational Inheritance.

    Science.gov (United States)

    Allen, Sarah E; Nowacki, Mariusz

    2017-03-01

    Ciliates are a fascinating model system for the study of the interaction between eukaryotic germlines and somatic lines, especially with regard to the invasion and defence against transposable elements. They separate their germline and somatic line into two nuclei within the same cell, and they silence transposons and repetitive elements by way of deleting them from their somatic genome. This large-scale deletion event uses a series of intricate sequence targeting pathways involving small RNAs and transposases, part of which consists of a transnuclear comparison between maternal soma and daughter germline. We present recent progress in this dynamic field, and argue that these DNA targeting pathways provide an optimal system for the transgenerational inheritance of acquired traits. Ciliates thus also demonstrate the evolutionary value of transposable elements, both as sources of sequence diversity and also as drivers of adaptive evolution by necessitating defensive systems.

  7. Dependence of reproductive rate on cell size and temperature in freshwater ciliated protozoa

    Energy Technology Data Exchange (ETDEWEB)

    Finlay, B.J.

    1977-01-01

    Reproductive rates have been calculated for ten species of ciliated protozoa in defined conditions. Interspecific double log regressions of generation time vs. cell volume have been computed at each of three temperatures (8.5/sup 0/C, 15/sup 0/C, and 20/sup 0/C) indicating a significant dependence of reproductive rate on cell size. Recorded generation times varied from 6.38 h in Vorticella microstoma at 20/sup 0/C to 1004 h in Spirostomum teres at 8.5/sup 0/C. These values correspond to a range in r/sub m/ (day)/sup -1/ of 2.607 to 0.017 and lambda (day)/sup -1/ of 13.554 to 1.017. The relationship between these data and similar published data for marine ciliates is examined and the value of such regressions in ecological studies of the protozoa is discussed.

  8. Ciliates learn to diagnose and correct classical error syndromes in mating strategies

    Directory of Open Access Journals (Sweden)

    Kevin Bradley Clark

    2013-08-01

    Full Text Available Preconjugal ciliates learn classical repetition error-correction codes to safeguard mating messages and replies from corruption by rivals and local ambient noise. Because individual cells behave as memory channels with Szilárd engine attributes, these coding schemes also might be used to limit, diagnose, and correct mating-signal errors due to noisy intracellular information processing. The present study, therefore, assessed whether heterotrich ciliates effect fault-tolerant signal planning and execution by modifying engine performance, and consequently entropy content of codes, during mock cell-cell communication. Socially meaningful serial vibrations emitted from an ambiguous artificial source initiated ciliate behavioral signaling performances known to advertise mating fitness with varying courtship strategies. Microbes, employing calcium-dependent Hebbian-like decision making, learned to diagnose then correct error syndromes by recursively matching Boltzmann entropies between signal planning and execution stages via power or refrigeration cycles. All eight serial contraction and reversal strategies incurred errors in entropy magnitude by the execution stage of processing. Absolute errors, however, subtended expected threshold values for single bit-flip errors in three-bit replies, indicating coding schemes protected information content throughout signal production. Ciliate preparedness for vibrations selectively and significantly affected the magnitude and valence of Szilárd engine performance during modal and nonmodal strategy corrective cycles. But entropy fidelity for all replies mainly improved across learning trials as refinements in engine efficiency. Fidelity neared maximum levels for only modal signals coded in resilient three-bit repetition error-correction sequences. Together, these findings demonstrate microbes can elevate survival/reproductive success by learning to implement classical fault-tolerant information processing in

  9. Assessing mariculture water quality with the structural and functional characteristics of a ciliate community

    Institute of Scientific and Technical Information of China (English)

    LI Jiqiu; XU Henglong; LIN Xiaofeng; AL-RASHEID Khaled A.S.

    2011-01-01

    Ciliated protozoa play important roles in micro-ecosystems, especially in marine biotopes. However, few studies have been carried out on the periphytic, or aufwuch, forms in mariculture waters so far. In this study, we sampled periphytic ciliate communities in two closed mariculture ponds (ponds CP1 and CP2) and a natural seawater reservoir (pond RP) using a glass slide method to evaluate their colonizing processes and general ecological features, as well as their application as water quality indicators. We analyzed species compositions, structural parameters (species number, richness, diversity, evenness, abundance and dBP) and functional parameters (G, Seq, and T90%). Pond RP was characterized by higher levels of structural parameters (except for abundance and dBp) and more equal proportion of the major taxonomic groups. The values of 5eq were significantly higher in pond RP and similar in both pond CP1 and CP2. It was also demonstrated that environmental factors, including NO2-H, NO3-H, NH3-H, soluble reactive phosphate, temperature and pH, were the first principal factors affecting the communities. Among them, temperature and chemical factors were all significantly and negatively correlated with species number (P<0.01), richness (P<0.01), diversity (P<0.01), and positive correlated with abundance (P<0.01). Opposite correlations between pH and structural parameters were observed. This study showed that there were significant differences in species composition, structural parameters and functional parameters of the periphytic ciliate communities among the ponds, which were in agreement with the water quality. Results of this study confirmed the periphytic ciliate communities to be useful bioindicators of water quality in intensive mariculture waters.

  10. Morphological Studies on the Infraciliature of a Planktonic Ciliate, Tintinnopsis brasiliensis (Ciliophora: Tintinina)

    Institute of Scientific and Technical Information of China (English)

    2006-01-01

    A poorly-described marine planktonic ciliate, Tintinnopsis brasiliensis Kofoid & Campbell, 1929, collected from the Taiping Cape of Qingdao, China, was morphologically investigated based on permanent preparation after protargol impregnation and was compared with other related congeners. According to the infraciliature, three ciliary groups can be recognized, which reveals a very stable structure among specimens and denotes that the pattern of infraciliature is, apart from the features of the lorica, a highly reliable criterion for species identification.

  11. Lifetime measurements of neutron-rich nuclei around {sup 48}Ca with the CLARA-PRISMA setup

    Energy Technology Data Exchange (ETDEWEB)

    Mengoni, D.; Farnea, E. [Dipartimento di Fisica dell' Universita, Padova (Italy); INFN, Sezione di Padova, Padova (Italy); Valiente-Dobon, J.J.; Latina, A. [Laboratori Nazionali di Legnaro, Istituto Nazionale di Fisica Nucleare, Legnaro (Italy); Gadea, A. [Laboratori Nazionali di Legnaro, Istituto Nazionale di Fisica Nucleare, Legnaro (Italy); CSIC-Universitat de Valencia, IFIC, Valencia (Spain); Dewald, A. [Institut fuer Kernphysik, Koeln Universitaet (Germany)

    2009-12-15

    The lifetimes of excited states in neutron-rich nuclei around the doubly-magic nucleus {sup 48}Ca have been measured using a novel technique that combines the Recoil Distance Doppler Shift method with the CLARA-PRISMA spectrometers. This is the first time such a method is applied to measure lifetimes of neutron-rich nuclei populated via a multinucleon transfer reaction. The experimental method are discussed and the results for Ca nuclei are compared with realistic simulations of the CLARA and PRISMA spectrometers. (orig.)

  12. Lethal giant larvae 2 regulates development of the ciliated organ Kupffer's vesicle.

    Science.gov (United States)

    Tay, Hwee Goon; Schulze, Sabrina K; Compagnon, Julien; Foley, Fiona C; Heisenberg, Carl-Philipp; Yost, H Joseph; Abdelilah-Seyfried, Salim; Amack, Jeffrey D

    2013-04-01

    Motile cilia perform crucial functions during embryonic development and throughout adult life. Development of organs containing motile cilia involves regulation of cilia formation (ciliogenesis) and formation of a luminal space (lumenogenesis) in which cilia generate fluid flows. Control of ciliogenesis and lumenogenesis is not yet fully understood, and it remains unclear whether these processes are coupled. In the zebrafish embryo, lethal giant larvae 2 (lgl2) is expressed prominently in ciliated organs. Lgl proteins are involved in establishing cell polarity and have been implicated in vesicle trafficking. Here, we identified a role for Lgl2 in development of ciliated epithelia in Kupffer's vesicle, which directs left-right asymmetry of the embryo; the otic vesicles, which give rise to the inner ear; and the pronephric ducts of the kidney. Using Kupffer's vesicle as a model ciliated organ, we found that depletion of Lgl2 disrupted lumen formation and reduced cilia number and length. Immunofluorescence and time-lapse imaging of Kupffer's vesicle morphogenesis in Lgl2-deficient embryos suggested cell adhesion defects and revealed loss of the adherens junction component E-cadherin at lateral membranes. Genetic interaction experiments indicate that Lgl2 interacts with Rab11a to regulate E-cadherin and mediate lumen formation that is uncoupled from cilia formation. These results uncover new roles and interactions for Lgl2 that are crucial for both lumenogenesis and ciliogenesis and indicate that these processes are genetically separable in zebrafish.

  13. Lethal giant larvae 2 regulates development of the ciliated organ Kupffer’s vesicle

    Science.gov (United States)

    Tay, Hwee Goon; Schulze, Sabrina K.; Compagnon, Julien; Foley, Fiona C.; Heisenberg, Carl-Philipp; Yost, H. Joseph; Abdelilah-Seyfried, Salim; Amack, Jeffrey D.

    2013-01-01

    Motile cilia perform crucial functions during embryonic development and throughout adult life. Development of organs containing motile cilia involves regulation of cilia formation (ciliogenesis) and formation of a luminal space (lumenogenesis) in which cilia generate fluid flows. Control of ciliogenesis and lumenogenesis is not yet fully understood, and it remains unclear whether these processes are coupled. In the zebrafish embryo, lethal giant larvae 2 (lgl2) is expressed prominently in ciliated organs. Lgl proteins are involved in establishing cell polarity and have been implicated in vesicle trafficking. Here, we identified a role for Lgl2 in development of ciliated epithelia in Kupffer’s vesicle, which directs left-right asymmetry of the embryo; the otic vesicles, which give rise to the inner ear; and the pronephric ducts of the kidney. Using Kupffer’s vesicle as a model ciliated organ, we found that depletion of Lgl2 disrupted lumen formation and reduced cilia number and length. Immunofluorescence and time-lapse imaging of Kupffer’s vesicle morphogenesis in Lgl2-deficient embryos suggested cell adhesion defects and revealed loss of the adherens junction component E-cadherin at lateral membranes. Genetic interaction experiments indicate that Lgl2 interacts with Rab11a to regulate E-cadherin and mediate lumen formation that is uncoupled from cilia formation. These results uncover new roles and interactions for Lgl2 that are crucial for both lumenogenesis and ciliogenesis and indicate that these processes are genetically separable in zebrafish. PMID:23482490

  14. Unfolding Thermodynamics of Cysteine-Rich Proteins and Molecular Thermal-Adaptation of Marine Ciliates

    Directory of Open Access Journals (Sweden)

    Giorgia Cazzolli

    2013-11-01

    Full Text Available Euplotes nobilii and Euplotes raikovi are phylogenetically closely allied species of marine ciliates, living in polar and temperate waters, respectively. Their evolutional relation and the sharply different temperatures of their natural environments make them ideal organisms to investigate thermal-adaptation. We perform a comparative study of the thermal unfolding of disulfide-rich protein pheromones produced by these ciliates. Recent circular dichroism (CD measurements have shown that the two psychrophilic (E. nobilii and mesophilic (E. raikovi protein families are characterized by very different melting temperatures, despite their close structural homology. The enhanced thermal stability of the E. raikovi pheromones is realized notwithstanding the fact that these proteins form, as a rule, a smaller number of disulfide bonds. We perform Monte Carlo (MC simulations in a structure-based coarse-grained (CG model to show that the higher stability of the E. raikovi pheromones is due to the lower locality of the disulfide bonds, which yields a lower entropy increase in the unfolding process. Our study suggests that the higher stability of the mesophilic E. raikovi phermones is not mainly due to the presence of a strongly hydrophobic core, as it was proposed in the literature. In addition, we argue that the molecular adaptation of these ciliates may have occurred from cold to warm, and not from warm to cold. To provide a testable prediction, we identify a point-mutation of an E. nobilii pheromone that should lead to an unfolding temperature typical of that of E. raikovi pheromones.

  15. Chromosome copy number variation and control in the ciliate Chilodonella uncinata.

    Directory of Open Access Journals (Sweden)

    Kevin J Spring

    Full Text Available Copy number variations are widespread in eukaryotes. The unusual genome architecture of ciliates, in particular, with its process of amitosis in macronuclear division, provides a valuable model in which to study copy number variation. The current model of amitosis envisions stochastic distribution of macronuclear chromosomes during asexual reproduction. This suggests that amitosis is likely to result in high levels of copy number variation in ciliates, as dividing daughter cells can have variable copy numbers of chromosomes if chromosomal distribution during amitosis is a stochastic process. We examined chromosomal distribution during amitosis in Chilodonella uncinata, a ciliate with gene-size macronuclear chromosomes. We quantified 4 chromosomes in evolving populations of C. uncinata and modeled the amitotic distribution process. We found that macronuclear chromosomes differ in copy number from one another but that copy number does not change as expected under a stochastic process. The chromosome carrying SSU increased in copy number, which is consistent with selection to increase abundance; however, two other studied chromosomes displayed much lower than expected among-line variance. Our models suggest that balancing selection is sufficient to explain the observed maintenance of chromosome copy during asexual reproduction.

  16. Integrative taxonomy of ciliates: Assessment of molecular phylogenetic content and morphological homology testing.

    Science.gov (United States)

    Vďačný, Peter

    2017-02-24

    The very diverse and comparatively complex morphology of ciliates has given rise to numerous taxonomic concepts. However, the information content of the utilized molecular markers has seldom been explored prior to phylogenetic analyses and taxonomic decisions. Likewise, robust testing of morphological homology statements and the apomorphic nature of diagnostic characters of ciliate taxa is rarely carried out. Four phylogenetic techniques that may help address these issues are reviewed. (1) Split spectrum analysis serves to determine the exact number and quality of nucleotide positions supporting individual nodes in phylogenetic trees and to discern long-branch artifacts that cause spurious phylogenies. (2) Network analysis can depict all possible evolutionary trajectories inferable from the dataset and locate and measure the conflict between them. (3) A priori likelihood mapping tests the suitability of data for reconstruction of a well resolved tree, visualizes the tree-likeness of quartets, and assesses the support of an internal branch of a given tree topology. (4) Reconstruction of ancestral morphologies can be applied for analyzing homology and apomorphy statements without circular reasoning. Since these phylogenetic tools are rarely used, their principles and interpretation are introduced and exemplified using various groups of ciliates. Finally, environmental sequencing data are discussed in this light.

  17. Methods for the cultivation of ciliated protozoa from the large intestine of horses.

    Science.gov (United States)

    Bełżecki, Grzegorz; Miltko, Renata; Michałowski, Tadeusz; McEwan, Neil R

    2016-01-01

    This paper describes cultivation methods for ciliates from the digestive tract of horses. Members of three different genera were successfully grown in vitro for short periods of time. However, only cells belonging to the genus Blepharocorys, which resides in the horse's large intestine, were maintained for longer periods. This Blepharocorys culture was successfully grown in vitro after inoculation of freshly excreted horse faeces in culture medium containing a population of bacteria. The ciliates survived for over six months, and the density of their population varied between 1.7 × 10(3) and 2.4 × 10(3) cells mL(-1). Favourable conditions for the prolonged cultivation of this ciliate were observed when the medium was prepared by mixing horse faeces and 'caudatum' salt solution in a 1:1 V/V ratio together with food (60% powdered meadow hay, 16% wheat gluten, 12% barley flour and 12% microcrystalline cellulose) supplied as 0.20 mg mL(-1) culture per day.

  18. The ability of the rumen ciliate protozoan Diploplastron affine to digest and ferment starch.

    Science.gov (United States)

    Wereszka, K; Michałowski, T

    2012-07-01

    The ciliate Diploplastron affine is known as a common species of the rumen fauna in cattle and sheep. This protozoon is able to digest cellulose, whereas its amylolytic activity is not well known. The objective of the reported studies was to examine the ability of D. affine to digest starch and to use this polysaccharide to cover the requirement for energy. The enzymatic studies showed that the protozoal cell extract degraded starch to reducing products with the rate being equivalent to 2.4 ± 0.47 μmol/L glucose per mg protein per min. Maltose, maltotriose and a small quantity of glucose were the end products of starch degradation. The degradation rate of maltose was only 0.05 μmol/L glucose per mg protein per min. Two peaks in α-amylase and a single peak in maltase activity were found following molecular filtration of ciliate cell extract, whereas three starch-degrading enzymes were identified by a zymographic technique. Incubation of the bacteria-free ciliates with starch in the presence of antibiotics resulted in a release of volatile fatty acids with the net rate of 25 pmol per protozoan per h. Acetic acid followed by butyric acid was the main product of starch fermentation. The results confirmed the ability of D. affine to utilize starch in energy-yielding processes.

  19. Ciliate biogeography in Antarctic and Arctic freshwater ecosystems: endemism or global distribution of species?

    Science.gov (United States)

    Petz, Wolfgang; Valbonesi, Alessandro; Schiftner, Uwe; Quesada, Antonio; Cynan Ellis-Evans, J

    2007-02-01

    Ciliate diversity was investigated in situ in freshwater ecosystems of the maritime (South Shetland Islands, mainly Livingston Island, 63 degrees S) and continental Antarctic (Victoria Land, 75 degrees S), and the High Arctic (Svalbard, 79 degrees N). In total, 334 species from 117 genera were identified in both polar regions, i.e. 210 spp. (98 genera) in the Arctic, 120 spp. (73 genera) in the maritime and 59 spp. (41 genera) in the continental Antarctic. Forty-four species (13% of all species) were common to both Arctic and Antarctic freshwater bodies and 19 spp. to both Antarctic areas (12% of all species). Many taxa are cosmopolitans but some, e.g. Stentor and Metopus spp., are not, and over 20% of the taxa found in any one of the three areas are new to science. Cluster analysis revealed that species similarity between different biotopes (soil, moss) within a study area was higher than between similar biotopes in different regions. Distinct differences in the species composition of freshwater and terrestrial communities indicate that most limnetic ciliates are not ubiquitously distributed. These observations and the low congruence in species composition between both polar areas, within Antarctica and between high- and temperate-latitude water bodies, respectively, suggest that long-distance dispersal of limnetic ciliates is restricted and that some species have a limited geographical distribution.

  20. Ciliates and the rare biosphere-community ecology and population dynamics.

    Science.gov (United States)

    Weisse, Thomas

    2014-01-01

    Application of deep sequencing technologies to environmental samples and some detailed morphological studies suggest that there is a vast, yet unexplored rare ciliate biosphere, tentatively defined in terms of operational taxonomic units. However, very few studies complemented molecular and phylogenetic data with morphological and ecological descriptions of the species inventory. This is mainly because the sampling effort increases strongly with decreasing species abundance. In spite of this limited knowledge, it is clear that species that are rare under certain environmental conditions (temporal rare biosphere) may become abundant when the physical, chemical, and biological variables of their habitat change. Furthermore, some species may always be present in low numbers if their dispersal rates are exceedingly high (accidental rare biosphere). An intriguing question is whether there are some species that are always rare, i.e., in every suitable environment. This permanent rare biosphere is conceptually different from the temporal rare biosphere. This review characterizes typical aquatic habitats of the rare ciliate biosphere, portrays different scenarios under which some or even many species may be permanently rare (background fauna), and identifies some fundamental questions that need to be addressed to achieve a better understanding of the population dynamics of the rare ciliate biosphere.

  1. Chloroplast symbiosis in a marine ciliate: ecophysiology and the risks and rewards of hosting foreign organelles.

    Science.gov (United States)

    McManus, George B; Schoener, Donald M; Haberlandt, Katharine

    2012-01-01

    Simultaneous use of both heterotrophic and autotrophic metabolism ("mixotrophy") is common among protists. Strombidium rassoulzadegani is a planktonic mixotrophic marine ciliate that saves chloroplasts from its algal food and obtains a nutritional subsidy via photosynthesis. Cultures from the northeast, northwest, and southwest Atlantic Ocean show similar numerical response parameters (maximum growth rate, food concentration at which growth is half its maximum, and threshold food concentration for growth), and some isolates have been maintained in vitro for over 3 years. This ciliate grows equally well when fed on the green alga Tetraselmis chui (strain PLY429) or the cryptophyte Rhodomonas lens (strain RHODO). It appears to be an obligate mixotroph, requiring both food and light to achieve positive growth, when feeding on either of these algae. However, it has also been grown for several weeks (>10 generations) heterotrophically on the dinoflagellate Prorocentrum minimum (strain EXUV) during which it grows better in dark than in light. In this paper, we review the ecology of S. rassoulzadegani, discuss some aspects of its photo- and feeding physiology, and speculate on benefits and costs to the ciliate of chloroplast symbiosis.

  2. Myosin Id is required for planar cell polarity in ciliated tracheal and ependymal epithelial cells.

    Science.gov (United States)

    Hegan, Peter S; Ostertag, Eric; Geurts, Aron M; Mooseker, Mark S

    2015-10-01

    In wild type (WT) tracheal epithelial cells, ciliary basal bodies are oriented such that all cilia on the cell surface beat in the same upward direction. This precise alignment of basal bodies and, as a result, the ciliary axoneme, is termed rotational planar cell polarity (PCP). Rotational PCP in the multi-ciliated epithelial cells of the trachea is perturbed in rats lacking myosin Id (Myo1d). Myo1d is localized in the F-actin and basal body rich subapical cortex of the ciliated tracheal epithelial cell. Scanning and transmission electron microscopy of Myo1d knock out (KO) trachea revealed that the unidirectional bending pattern is disrupted. Instead, cilia splay out in a disordered, often radial pattern. Measurement of the alignment axis of the central pair axonemal microtubules was much more variable in the KO, another indicator that rotational PCP is perturbed. The asymmetric localization of the PCP core protein Vangl1 is lost. Both the velocity and linearity of cilia-driven movement of beads above the tracheal mucosal surface was impaired in the Myo1d KO. Multi-ciliated brain ependymal epithelial cells exhibit a second form of PCP termed translational PCP in which basal bodies and attached cilia are clustered at the anterior side of the cell. The precise asymmetric clustering of cilia is disrupted in the ependymal cells of the Myo1d KO rat. While basal body clustering is maintained, left-right positioning of the clusters is lost.

  3. Water resources development in Santa Clara Valley, California: insights into the human-hydrologic relationship

    Energy Technology Data Exchange (ETDEWEB)

    Reynolds, Jesse L. [Univ. of California, Berkeley, CA (United States)

    2000-06-01

    Groundwater irrigation is critical to food production and, in turn, to humankind's relationship with its environment. The development of groundwater in Santa Clara Valley, California during the early twentieth century is instructive because (1) responses to unsustainable resource use were largely successful; (2) the proposals for the physical management of the water, although not entirely novel, incorporated new approaches which reveal an evolving relationship between humans and the hydrologic cycle; and (3) the valley serves as a natural laboratory where natural (groundwater basin, surface watershed) and human (county, water district) boundaries generally coincide. Here, I investigate how water resources development and management in Santa Clara Valley was influenced by, and reflective of, a broad understanding of water as a natural resource, including scientific and technological innovations, new management approaches, and changing perceptions of the hydrologic cycle. Market demands and technological advances engendered reliance on groundwater. This, coupled with a series of dry years and laissez faire government policies, led to overdraft. Faith in centralized management and objective engineering offered a solution to concerns over resource depletion, and a group dominated by orchardists soon organized, fought for a water conservation district, and funded an investigation to halt the decline of well levels. Engineer Fred Tibbetts authored an elaborate water salvage and recharge plan that optimized the local water resources by integrating multiple components of the hydrologic cycle. Informed by government investigations, groundwater development in Southern California, and local water law cases, it recognized the limited surface storage possibilities, the spatial and temporal variability, the relatively closed local hydrology, the interconnection of surface and subsurface waters, and the value of the groundwater basin for its storage, transportation, and

  4. Caracterización de la mortalidad fetal tardía en Villa Clara. Characterization of Late Fetal Mortality in Villa Clara.

    Directory of Open Access Journals (Sweden)

    Juan Antonio Suárez González

    2011-10-01

    Full Text Available

    Fundamento: Eventos como la mortalidad fetal tardía agreden la evolución normal esperada en el embarazo, con una connotación en la mujer, la pareja y la comunidad. Objetivo: Caracterizar la mortalidad fetal tardía según factores asociados. Métodos: Se realizó un estudio descriptivo de las 74 muertes fetales registradas en el Hospital Universitario Ginecoobstétrico Mariana Grajales de Santa Clara, durante los años 2009 y 2010. Se analizaron las variables: edad materna, antecedentes patológicos personales maternos, edad gestacional al momento de la muerte fetal, lugar y momento de ocurrencia y causas de la muerte. Resultados: El 67,6 % de las gestantes tenían entre 20 y 35 años. La hipertensión arterial crónica y el asma bronquial fueron los antecedentes patológicos personales de mayor incidencia entre las gestantes. Ocurrieron los óbitos fetales en una edad gestacional entre 28 y 36,6 semanas fundamentalmente. El 52,7 % de las muertes ocurrieron fuera del hospital y antes del parto en 55 casos (74,3 %. Resultaron las causas más frecuentes las idiopáticas y los trastornos hipertensivos de la gestación. Conclusiones: Es necesario intensificar el control del riesgo reproductivo preconcepcional y la atención prenatal, pues sin dudas, aunque mucho se ha logrado en este sentido, los resultados del estudio muestran que en alguna medida las causas de los óbitos fetales fueron prevenibles.

    Background: Events like late fetal mortality alter the regular, expected course of pregnancy. This carries a negative connotation for the woman, the couple and the community. Objective: To characterize late fetal mortality according to associated factors. Methods: A descriptive study of the 74 fetal deaths registered in the ’Mariana Grajales’ Gynecological and Obstetric University Hospital of Santa

  5. Modeling Nitrogen Deposition for the Santa Clara County Habitat Conservation Plan

    Science.gov (United States)

    Weiss, S. B.; Meyers, T.; Held, T.; Zippen, D.

    2009-12-01

    Nutrient-poor serpentine soils in Santa Clara County, CA, support numerous rare, threatened, and endangered species such as the Bay checkerspot butterfly. Serpentine grasslands are particularly vulnerable to atmospheric nitrogen deposition, which provides a competitive advantage to invasive annual grasses which overrun the flower-filled grasslands and degrade habitat for the protected species. The effects of N-deposition on these grasslands was first scientifically documented in 1999, and led to a series of mitigation projects for powerplants and road improvements that include habitat acquisition, monitoring, and grazing management. In 2005, a Habitat Conservation Plan/Natural Communities Conservation Plan (HCP/NCCP) was initiated to consolidate project-by-project mitigation into a regional plan covering impacts, especially indirect impacts on N-deposition, from development within the 209,500 ha study area (62% of Santa Clara County) and the cities therein. This HCP/NCCP is the first to address N-deposition effects on biodiversity. To understand the origins of the nitrogen being deposited in Santa Clara grasslands, IFC Jones & Stokes used multiple air quality modeling approaches including Gaussian line-source modeling of major highways and regional Community Multiscale Air Quality (CMAQ) modeling. Line-source modeling allowed for the estimation of N-deposition resulting from increased traffic. Gaussian modeling results indicate that the major highways closest to serpentine habitats result in the greatest environmental impact. The CMAQ modeling used the Particle and Precursor Tagging Methodology (PPTM) source apportionment technique to partition sources. In the base period (Dec 2000- Jan 2001), the CMAQ PPTM simulation estimates that 30% of the total nitrogen deposition is associated with mobile sources operating within the study area; an additional 16% emanates from stationary sources in the study area. Therefore, 46% of nitrogen deposition on the habitat areas

  6. Migration, Memory and Hong Kong as a 'Space of Transit' in Clara Law's Autumn Moon

    Directory of Open Access Journals (Sweden)

    Tony Mitchell

    2013-09-01

    Full Text Available Macau-born and Melbourne-based film maker Clara Law and her screenwriter-producer-director husband Eddie Fong have produced a transnational output of films which are beginning to receive critical recognition as major contributions to contemporary cinema. These ‘films of migration’ explore what Gina Marchetti has encapsulated as ‘the Chinese experience of dislocation, relocation, emigration, immigration, cultural hybridity, migrancy, exile, and nomadism—together termed the “Chinese diaspora”’. The self-imposed ‘relocation’ of Law and Fong to Australia in 1994 was the result of increasing frustration with the rampantly commercial imperatives of Hong Kong cinema and its lack of appreciation for the auteur cinema they wanted to pursue.

  7. Comportamento do camarão em diferentes substratos nas fases clara e escura do dia

    Directory of Open Access Journals (Sweden)

    Daniele Bezerra dos Santos

    2013-08-01

    Full Text Available O objetivo deste trabalho foi avaliar o efeito do tipo de substrato sobre a preferência, o enterramento e a atividade natatória de camarões (Litopenaeus vannamei. Juvenis (0,93±0,29 g e adultos machos e fêmeas (10,05±1,18 g foram observados durante 24 horas, por meio do método animal focal, com registros instantâneos. Foram testadas as seguintes granulometrias (tratamentos dos substratos: I, 100% C; II, 50% C + 50% B; III, 50% A + 50% C; IV, 100% B; V, 50% B + 50% A; e VI, 100% A, em que as letras referemse ao diâmetro médio das partículas, A = 0,25-2,0 mm; B = 0,0625-0,25 mm; e C = <0,0625 mm. Foram aplicados seis tratamentos com 18 repetições para cada categoria: camarões juvenis, machos e fêmeas. Cada indivíduo foi exposto por 24 horas aos seis tipos de substrato, simultaneamente, e o seu comportamento foi observado nas fases clara e escura do dia. A natação ocorreu principalmente na fase escura e o enterramento, na fase clara, no substrato IV. Os camarões juvenis e adultos (machos ou fêmeas preferem o substrato composto de areia fina e muito fina (0,0625-0,25 mm, tanto para permanência quanto para enterramento.

  8. Nutrient contributions to the Santa Barbara Channel, California, from the ephemeral Santa Clara River

    Science.gov (United States)

    Warrick, J.A.; Washburn, L.; Brzezinski, Mark A.; Siegel, D.A.

    2005-01-01

    The Santa Clara River delivers nutrient rich runoff to the eastern Santa Barbara Channel during brief (???1-3 day) episodic events. Using both river and oceanographic measurements, we evaluate river loading and dispersal of dissolved macronutrients (silicate, inorganic N and P) and comment on the biological implications of these nutrient contributions. Both river and ocean observations suggest that river nutrient concentrations are inversely related to river flow rates. Land use is suggested to influence these concentrations, since runoff from a subwatershed with substantial agriculture and urban areas had much higher nitrate than runoff from a wooded subwatershed. During runoff events, river nutrients were observed to conservatively mix into the buoyant, surface plume immediately seaward of the Santa Clara River mouth. Dispersal of these river nutrients extended 10s of km into the channel. Growth of phytoplankton and nutrient uptake was low during our observations (1-3 days following runoff), presumably due to the very low light levels resulting from high turbidity. However, nutrient quality of runoff (Si:N:P = 16:5:1) was found to be significantly different than upwelling inputs (13:10:1), which may influence different algal responses once sediments settle. Evaluation of total river nitrate loads suggests that most of the annual river nutrient fluxes to the ocean occur during the brief winter flooding events. Wet winters (such as El Nin??o) contribute nutrients at rates approximately an order-of-magnitude greater than "average" winters. Although total river nitrate delivery is considerably less than that supplied by upwelling, the timing and location of these types of events are very different, with river discharge (upwelling) occurring predominantly in the winter (summer) and in the eastern (western) channel. ?? 2004 Elsevier Ltd. All rights reserved.

  9. Startup, testing, and operation of the Santa Clara 2MW direct carbonate fuel cell demonstration plant

    Energy Technology Data Exchange (ETDEWEB)

    Skok, A.J.; Leo, A.J. [Fuel Cell Engineering Corp., Danbury, CT (United States); O`Shea, T.P. [Santa Clara Demonstration Project, CA (United States)

    1996-12-31

    The Santa Clara Demonstration Project (SCDP) is a collaboration between several utility organizations, Fuel Cell Engineering Corporation (FCE), and the U.S. Dept. Of Energy aimed at the demonstration of Energy Research Corporation`s (ERC) direct carbonate fuel cell (DFC) technology. ERC has been pursuing the development of the DFC for commercialization near the end of this decade, and this project is an integral part of the ERC commercialization effort. The objective of the Santa Clara Demonstration Project is to provide the first full, commercial scale demonstration of this technology. The approach ERC has taken in the commercialization of the DFC is described in detail elsewhere. An aggressive core technology development program is in place which is focused by ongoing interaction with customers and vendors to optimize the design of the commercial power plant. ERC has selected a 2.85 MW power plant unit for initial market entry. Two ERC subsidiaries are supporting the commercialization effort: the Fuel Cell Manufacturing Corporation (FCMC) and the Fuel Cell Engineering Corporation (FCE). FCMC manufactures carbonate stacks and multi-stack modules, currently from its production facility in Torrington, CT. FCE is responsible for power plant design, integration of all subsystems, sales/marketing, and client services. FCE is serving as the prime contractor for the design, construction, and testing of the SCDP Plant. FCMC has manufactured the multi-stack submodules used in the DC power section of the plant. Fluor Daniel Inc. (FDI) served as the architect-engineer subcontractor for the design and construction of the plant and provided support to the design of the multi-stack submodules. FDI is also assisting the ERC companies in commercial power plant design.

  10. 76 FR 68784 - Notice of Realty Action: Direct Sale of Public Land in Santa Clara County, CA

    Science.gov (United States)

    2011-11-07

    ....EU0000; CACA 50168 12] Notice of Realty Action: Direct Sale of Public Land in Santa Clara County, CA....html . SUPPLEMENTARY INFORMATION: The following parcel of public land is being proposed for direct sale... legal access. The BLM is proposing a direct sale to Mariposa Peak, LLC. Mariposa Peak, LLC, owns...

  11. Mapping Typha Domingensis in the Cienega de Santa Clara Using Satellite Images, Global Positioning System, and Spectrometry

    Science.gov (United States)

    Sanchez, Richard D.; Burnett, Earl E.; Croxen, Fred

    2000-01-01

    The Cienega de Santa Clara, Sonora, Mexico, a brackish wetland area created near the delta of the Colorado River from drainage effluent flowing from the United States since 1977, may undergo changes owing to the operation of the Yuma Desalting Plant in the United States. This has become the largest wetland in the delta region containing rare and endangered species, yet little is known about the environmental impact of these changes. The water quality of the marsh is of growing concern to the Bureau of Reclamation (BOR) which operates the Desalting Plant. Consequently, the BOR solicited the U.S. Geological Survey to investigate the limits and usefulness of satellite, global positioning system (GPS), and spectra data to map the Typha domingensis (cattail) of the Cienega de Santa Clara. Typha domingensis was selected by the BOR as the Cienega de Santa Clara indicator species to best predict the environmental effects of effl uent from the Yuma Desalting Plant. The successful base mapping of Typha domingensis will provide a viable tool for long-term monitoring and stress detection in the Cienega de Santa Clara.

  12. Phylogenetic position of Licnophora, Lechriopyla, and Schizocaryum, three unusual ciliates (phylum Ciliophora) endosymbiotic in echinoderms (phylum Echinodermata).

    Science.gov (United States)

    Lynn, Denis H; Strüder-Kypke, Michaela

    2002-01-01

    Various echinoderms are colonized by species from several classes of the Phylum Ciliophora, indicating that the echinoderm "habitat" has been invaded independently on numerous occasions throughout evolutionary history. Two "echinoderm" ciliates whose phylogenetic positions have been problematic are Licnophora macfarlandi Stevens, 1901 and Schizocaryum dogieli Poljansky and Golikova, 1957. Licnophora macfarlandi is an endosymbiont of the respiratory trees of holothuroids, and S. dogieli is found in the esophagus of echinoids. A third species, Lechriopyla mystax Lynch, 1930, is a plagiopylid ciliate found in the intestine of echinoids. Host echinoderms were collected near the Friday Harbor Laboratories, San Juan Island, WA. Specimens of S. dogieli and L. mystax were obtained from the esophagus and intestine, respectively, of the sea urchin Strongylocentrotus pallidus. Specimens of L. macfarlandi were collected from the fluid obtained from the respiratory trees of Parastichopus californicus. Using small subunit ribosomal RNA (SSrRNA) sequences of these three ciliates and a global alignment of SSrRNA sequences of other ciliates, we established the following. 1) Licnophora is a spirotrich ciliate, clearly related to the hypotrichs and stichotrichs; this is corroborated by its possession of macronuclear replication bands. 2) Lechriopyla is the sister genus to Plagiopyla and is a member of the Class Plagiopylea, which was predicted based on its cytology. 3) Schizocaryum clusters in the Class Oligohymenophorea and is most closely related to the scuticociliates; there are currently no morphological features known to relate Schizocaryum to the scuticociliates.

  13. Macronuclear genome structure of the ciliate Nyctotherus ovalis: Single-gene chromosomes and tiny introns

    Directory of Open Access Journals (Sweden)

    Landweber Laura F

    2008-12-01

    Full Text Available Abstract Background Nyctotherus ovalis is a single-celled eukaryote that has hydrogen-producing mitochondria and lives in the hindgut of cockroaches. Like all members of the ciliate taxon, it has two types of nuclei, a micronucleus and a macronucleus. N. ovalis generates its macronuclear chromosomes by forming polytene chromosomes that subsequently develop into macronuclear chromosomes by DNA elimination and rearrangement. Results We examined the structure of these gene-sized macronuclear chromosomes in N. ovalis. We determined the telomeres, subtelomeric regions, UTRs, coding regions and introns by sequencing a large set of macronuclear DNA sequences (4,242 and cDNAs (5,484 and comparing them with each other. The telomeres consist of repeats CCC(AAAACCCCn, similar to those in spirotrichous ciliates such as Euplotes, Sterkiella (Oxytricha and Stylonychia. Per sequenced chromosome we found evidence for either a single protein-coding gene, a single tRNA, or the complete ribosomal RNAs cluster. Hence the chromosomes appear to encode single transcripts. In the short subtelomeric regions we identified a few overrepresented motifs that could be involved in gene regulation, but there is no consensus polyadenylation site. The introns are short (21–29 nucleotides, and a significant fraction (1/3 of the tiny introns is conserved in the distantly related ciliate Paramecium tetraurelia. As has been observed in P. tetraurelia, the N. ovalis introns tend to contain in-frame stop codons or have a length that is not dividable by three. This pattern causes premature termination of mRNA translation in the event of intron retention, and potentially degradation of unspliced mRNAs by the nonsense-mediated mRNA decay pathway. Conclusion The combination of short leaders, tiny introns and single genes leads to very minimal macronuclear chromosomes. The smallest we identified contained only 150 nucleotides.

  14. Using Sorting by Reversal: Breakpoint Graph for Gene Assembly in Ciliates

    Science.gov (United States)

    Brijder, Robert; Jan Hoogeboom, Hendrik

    2007-09-01

    The theory of gene assembly in ciliates has much in common with the theory of sorting by reversal. Both model processes that are based on splicing, and have a fixed begin and end product. The main difference is the type of splicing operations used to obtain the end product from the begin product. In this overview paper we show that the concept of breakpoint graph, known from the theory of sorting by reversal, has many uses in the theory of gene assembly. Our aim is to present the material in an intuitive and informal manner to allow for an efficient introduction into the subject.

  15. On the marine ciliate, Pseudocohnilembus hargisi (Protozoa, ciliophora, scuticociliatida) with comparison of its related species

    Science.gov (United States)

    Gong, Jun; Ma, Hong-Wei; Song, Wei-Bo

    2002-09-01

    The living morphology, nuclear apparatus, infraciliature and silverline system of the poorly-known ciliate Pseudocohnilembus hargisi Evans & Thompson, 1964, collected from a shrimp culture pond in Qingdao, China, were examined by observation of the live specimen; and by the pyridinated carbonate method and Chatton-Lwoff technique. The main characteristics: 13 14 (usually 13) longitudinal or slightly spirally arranged somatic kineties; single contractile vacuole with usually 2 (1 2) pores at posterior ends of the fourth and fifth somatic kineties to the right of the buccal cavity. Several related congeners were compared and morphometrically tabulated.

  16. ON THE MARINE CILIATE, Pseudocohnilembus hargisi (PROTOZOA,CILIOPHORA, SCUTICOCILIATIDA) WITH COMPARISON OF ITS RELATED SPECIES

    Institute of Scientific and Technical Information of China (English)

    龚骏; 马宏伟; 宋微波

    2002-01-01

    The living morphology, nuclear apparatus, infraciliature and silverline system o f the poorly-known ciliate Pseudocohnilembus hargisi Evans & Thompson, 1964 , collected from a shrimp culture pond in Qingdao, China, were examined by obser vation of the live specimen; and by the pyridinated carbonate method and Chatton -Lwoff technique. The main characteristics: 13-14 (usually 13) longitudinal or slightly spirally arranged somatic kineties; single contractile vacuole with usually 2 ( 1-2) pores at posterior ends of the fourth and fifth somatic kineties to the rig ht of the buccal cavity. Several related congeners were compared and morphometri cally tabulated.

  17. Mechanical strain determines the axis of planar polarity in ciliated epithelia

    OpenAIRE

    2015-01-01

    Epithelia containing multiciliated cells align beating cilia along a common planar axis specified by the conserved planar cell polarity (PCP) pathway. Specification of the planar axis is also thought to require a long-range cue to align the axis globally, but the nature of this cue in ciliated and other epithelia remains poorly understood. We examined this issue using the Xenopus larval skin where ciliary flow aligns to the anterior-posterior (A-P) axis. We first show that a planar axis initi...

  18. Ciliate protozoa in the rumen of Kafue lechwe, Kobus leche kafuensis, in Zambia, with the description of four new species.

    Science.gov (United States)

    Imai, S; Tsutsumi, Y; Yumura, S; Mulenga, A

    1992-01-01

    The composition of the rumen ciliate fauna in 76 Kafue lechwe inhabiting a limited area in Zambia was surveyed and five genera containing 24 species with 16 formae belonging to the family Ophryoscolecidae were identified. Four new species belonging to Diplodiniinae were recognized and described as Diplodinium lochinvarense n. sp., Diplodinium leche n. sp., Diplodinium zambiense n. sp., and Metadinium ossiculi n. sp. In addition, Ostracodinium gracile form fissilaminatum Dogiel, 1932 was found for the second time and described as Metadinium fissilaminatum n. comb. The species composition was fairly unusual. Seven of the species have been found only in African wild antelopes and these species were found more frequently than cosmopolitan species. There was no evidence of isotrichid species. The average density of ciliates per 1 ml of the rumen fluid was 25.7 x 10(4), and the number of ciliate species per head of host was 10.8.

  19. Subsurface and petroleum geology of the southwestern Santa Clara Valley ("Silicon Valley"), California

    Science.gov (United States)

    Stanley, Richard G.; Jachens, Robert C.; Lillis, Paul G.; McLaughlin, Robert J.; Kvenvolden, Keith A.; Hostettler, Frances D.; McDougall, Kristin A.; Magoon, Leslie B.

    2002-01-01

    Gravity anomalies, historical records of exploratory oil wells and oil seeps, new organic-geochemical results, and new stratigraphic and structural data indicate the presence of a concealed, oil-bearing sedimentary basin beneath a highly urbanized part of the Santa Clara Valley, Calif. A conspicuous isostatic-gravity low that extends about 35 km from Palo Alto southeastward to near Los Gatos reflects an asymmetric, northwest-trending sedimentary basin comprising low-density strata, principally of Miocene age, that rest on higher-density rocks of Mesozoic and Paleogene(?) age. Both gravity and well data show that the low-density rocks thin gradually to the northeast over a distance of about 10 km. The thickest (approx 4 km thick) accumulation of low-density material occurs along the basin's steep southwestern margin, which may be controlled by buried, northeast-dipping normal faults that were active during the Miocene. Movement along these hypothetical normal faults may been contemporaneous (approx 17–14 Ma) with sedimentation and local dacitic and basaltic volcanism, possibly in response to crustal extension related to passage of the northwestward-migrating Mendocino triple junction. During the Pliocene and Quaternary, the normal faults and Miocene strata were overridden by Mesozoic rocks, including the Franciscan Complex, along northeastward-vergent reverse and thrust faults of the Berrocal, Shannon, and Monte Vista Fault zones. Movement along these fault zones was accompanied by folding and tilting of strata as young as Quaternary and by uplift of the modern Santa Cruz Mountains; the fault zones remain seismically active. We attribute the Pliocene and Quaternary reverse and thrust faulting, folding, and uplift to compression caused by local San Andreas Fault tectonics and regional transpression along the Pacific-North American Plate boundary. Near the southwestern margin of the Santa Clara Valley, as many as 20 exploratory oil wells were drilled between 1891

  20. SRTM Perspective View with Landsat Overlay: Santa Paula, and Santa Clara River Valley, California

    Science.gov (United States)

    2000-01-01

    Rectangular fields of the agriculturally rich Santa Clara River Valley are visible in this perspective view generated using data from the Shuttle Radar Topography Mission and an enhanced Landsat image. The Santa Clara River, which lends its name to this valley, flows from headwaters near Acton, California, 160 km (100 miles) to the Pacific Ocean, and is one of only two natural river systems remaining in southern California. In the foreground of this image, the largely dry riverbed can be seen as a bright feature as it winds its way along the base of South Mountain. The bright region at the right end of this portion of the valley is the city of Santa Paula, California. Founded in 1902, this small, picturesque town at the geographic center of Ventura County is referred to as the 'Citrus Capital of the World.' The city is surrounded by orange, lemon, and avocado groves and is a major distribution point for citrus fruits in the United States. The bright, linear feature in the center of the valley is State Highway 126, the valley's 'main drag.' For visualization purposes, topographic heights displayed in this image are exaggerated two times. Colors, from Landsat data, approximate natural color.The elevation data used in this image was acquired by SRTM aboard the Space Shuttle Endeavour, launched on February 11, 2000. SRTM used the same radar instrument that comprised the Spaceborne Imaging Radar-C/X-Band Synthetic Aperture Radar (SIR-C/X-SAR) that flew twice on Endeavour in 1994. SRTM was designed to collect three-dimensional measurements of Earth's land surface. To collect the 3-D SRTM data, engineers added a mast 60 meters (about 200 feet)long, installed additional C-band and X-band antennas, and improved tracking and navigation devices. The mission is a cooperative project between the NASA, the National Imagery and Mapping Agency (NIMA) of the U.S. Department of Defense, and the German and Italian space agencies. It is managed by NASA's Jet Propulsion Laboratory

  1. Phosphorus, nitrogen and chlorophyll-a are significant factors controlling ciliate communities in summer in the northern Beibu Gulf, South China Sea.

    Science.gov (United States)

    Wang, Yibo; Zhang, Wenjing; Lin, Yuanshao; Cao, Wenqing; Zheng, Lianming; Yang, Jun

    2014-01-01

    Ciliates (protozoa) are ubiquitous components of plankton community and play important roles in aquatic ecosystems in regards of their abundance, biomass, diversity and energy turnover. Based on the stratified samples collected from the northern Beibu Gulf in August 2011, species composition, abundance, biomass, diversity and spatial pattern of planktonic ciliates were studied. Furthermore the main environmental factors controlling ciliate communities were determined. A total of 101 species belonging to 44 genera and 7 orders (i.e., Oligotrichida, Haptorida, Euplotida, Sessilida, Pleurostomatida, Scuticociliatida and Tintinnida) were identified. The variation of ciliate communities was significant at horizontal level, but that was not at vertical level. Based on cluster analysis, ciliate communities were divided into three main groups. Redundancy analysis (RDA) revealed that Group A, existing in the waters with higher concentration of phosphorus and nitrogen, was dominated by Tintinnidium primitivum. Group B in the waters with lower temperature and chlorophyll-a concentration, was dominated by Leegaardiella ovalis. Group C, existing in the waters with higher temperature and chlorophyll-a concentration, was dominated by large Strombidium spp. and Mesodinium rubrum. Combining multiple analytic methods, our results strongly supported that phosphorus, nitrogen and chlorophyll-a were the most significant factors affecting the ciliate communities in the northern Beibu Gulf in summer. Concentration of phosphorus and nitrogen primarily influenced ciliate biomass, implying a potential impact of eutrophication on ciliate growth. The correlation with chlorophyll-a concentration, on one hand indicate the response of ciliates to the food availability, and on the other hand, the ciliates containing chloroplasts or endosymbionts may contribute greatly to the chlorophyll-a.

  2. Phosphorus, nitrogen and chlorophyll-a are significant factors controlling ciliate communities in summer in the northern Beibu Gulf, South China Sea.

    Directory of Open Access Journals (Sweden)

    Yibo Wang

    Full Text Available Ciliates (protozoa are ubiquitous components of plankton community and play important roles in aquatic ecosystems in regards of their abundance, biomass, diversity and energy turnover. Based on the stratified samples collected from the northern Beibu Gulf in August 2011, species composition, abundance, biomass, diversity and spatial pattern of planktonic ciliates were studied. Furthermore the main environmental factors controlling ciliate communities were determined. A total of 101 species belonging to 44 genera and 7 orders (i.e., Oligotrichida, Haptorida, Euplotida, Sessilida, Pleurostomatida, Scuticociliatida and Tintinnida were identified. The variation of ciliate communities was significant at horizontal level, but that was not at vertical level. Based on cluster analysis, ciliate communities were divided into three main groups. Redundancy analysis (RDA revealed that Group A, existing in the waters with higher concentration of phosphorus and nitrogen, was dominated by Tintinnidium primitivum. Group B in the waters with lower temperature and chlorophyll-a concentration, was dominated by Leegaardiella ovalis. Group C, existing in the waters with higher temperature and chlorophyll-a concentration, was dominated by large Strombidium spp. and Mesodinium rubrum. Combining multiple analytic methods, our results strongly supported that phosphorus, nitrogen and chlorophyll-a were the most significant factors affecting the ciliate communities in the northern Beibu Gulf in summer. Concentration of phosphorus and nitrogen primarily influenced ciliate biomass, implying a potential impact of eutrophication on ciliate growth. The correlation with chlorophyll-a concentration, on one hand indicate the response of ciliates to the food availability, and on the other hand, the ciliates containing chloroplasts or endosymbionts may contribute greatly to the chlorophyll-a.

  3. Osmotic Effect of Conditioning on Seeds of Tomato (Solanum Lycopersicum L. Santa Clara Variety

    Directory of Open Access Journals (Sweden)

    Brigitte Liliana Moreno Medina

    2013-12-01

    Full Text Available The tomato (Solanum lycopersicum L. is one of the most important vegetables in the world, taking into account its nutritional potential and high economic value. In this crop the quality of seed depends on various factors, one of which is its physiology, which is determined by a germination and viability test. Osmotic seed conditioning is reported to be a technique for improving the physiological quality through the uniformity of the germination percentage. For this reason, the objective of this research was to evaluate the osmotic conditioning on tomato seeds of the Santa Clara variety. Using treatments of four doses of potassium nitrate (0, 100, 200 and 400 mg L-1 , the seeds were imbibitioned for 24 hours in solution and then washed with distilled water. They were placed in petri dishes in random order with three replications for a total of 12 experimental units, consisting of 35 seeds. The method seeks to hydrate the seeds with a solution of given concentration and for a period of time, in order to activate the seed metabolism. The best result was obtained with the treatment of 200 mg L-1 of potassium nitrate, followed by 400 mg L-1 , represented by a lower TMG , lower and higher PG VMG.

  4. Chromium geochemistry of serpentinous sediment in the Willow core, Santa Clara County, California

    Science.gov (United States)

    Oze, Christopher J.; LaForce, Matthew J.; Wentworth, Carl M.; Hanson, Randall T.; Bird, Dennis K.; Coleman, Robert G.

    2003-01-01

    A preliminary investigation of Cr geochemistry in serpentinous sediment completed for a multiple-aquifer ground-water monitoring well (Willow core of Santa Clara County, CA) determined sediment at depths >225 meters contains Cr concentrations ranging from 195 to 1155 mg/kg. Serpentinous sediment from this site is a potential source of non-anthropogenic Cr contamination. Chromium-bearing minerals such as Cr-spinel appear to be the main source of Cr in the sediment; however, Cr-bearing silicates and clay minerals are additional Cr sources. Aqueous Cr concentrations in the sediment are <4.6 mg/L; however, the valence of Cr was not identified in the solutions or in the sediment. Although there is no indication of Cr(VI) contamination derived from the serpentinous sediment, elevated Cr concentrations in the sediment, the observed ‘dissolution’ textures of the Cr-bearing minerals, the estimated redox environment, and water chemistry indicate the formation of Cr(VI) is potentially favorable.

  5. Seasonal trends of atmospheric nitrogen dioxide and sulfur dioxide over North Santa Clara, Cuba.

    Science.gov (United States)

    Alejo, Daniellys; Morales, Mayra C; de la Torre, Jorge B; Grau, Ricardo; Bencs, László; Van Grieken, René; Van Espen, Piet; Sosa, Dismey; Nuñez, Vladimir

    2013-07-01

    Atmospheric nitrogen dioxide (NO2) and sulfur dioxide (SO2) levels were monitored simultaneously by means of Radiello passive samplers at six sites of Santa Clara city, Cuba, in the cold and the warm seasons in 2010. The dissolved ionic forms of NO2 and SO2 as nitrate and sulfite plus sulfate, respectively, were determined by means of ion chromatography. Analysis of NO2 as nitrite was also performed by UV-Vis spectrophotometry. For NO2, significant t tests show good agreement between the results of IC and UV-Vis methods. The NO2 and SO2 concentrations peaked in the cold season, while their minimum levels were experienced in the warm season. The pollutant levels do not exceed the maximum allowable limit of the Cuban Standard 39:1999, i.e., 40 μg/m(3) and 50 μg/m(3) for NO2 and SO2, respectively. The lowest pollutant concentrations obtained in the warm season can be attributed to an increase in their removal via precipitation (scavenging) while to the decreased traffic density and industrial emission during the summer holidays (e.g., July and August).

  6. Elastic stresses and plastic deformations in 'Santa Clara' tomato fruits caused by package dependent compression

    Directory of Open Access Journals (Sweden)

    PEREIRA ADRIANA VARGAS

    2000-01-01

    Full Text Available The objective of this work was to study the fruit compression behavior aiming to develop new tomato packages. Deformations caused by compression forces were observed inside packages and in individual 'Santa Clara' tomato fruit. The forces applied by a transparent acrylic lever to the fruit surface caused pericarp deformation and the flattened area was proportional to the force magnitude. The deformation was associated to the reduction in the gas volume (Vg, caused by expulsion of the air from the loculus cavity and reduction in the intercellular air volume of the pericarp. As ripening advanced, smaller fractions of the Vg reduced by the compressive force were restored after the stress was relieved. The lack of complete Vg restoration was an indication of permanent plastic deformations of the stressed cells. Vg regeneration (elastic recovery was larger in green fruits than in the red ones. The ratio between the applied force and the flattened area (flattening pressure, which depends on cell turgidity, decreased during ripening. Fruit movements associated with its depth in the container were observed during storage in a transparent glass container (495 x 355 x 220 mm. The downward movement of the fruits was larger in the top layers because these movements seem to be driven by a summation of the deformation of many fruits in all layers.

  7. Land subsidence in the Santa Clara Valley, California as of 1980

    Science.gov (United States)

    Poland, J.F.; Ireland, R.L.

    1984-01-01

    From 1916 to 1966 in the San Jose area of Santa Clara Valley, California, deficient rainfall and runoff was accompanied by a fourfold increase in groundwater withdrawals. In response the artesian head declined 180-240 ft. The land surface subsided 12.7 ft in San Jose, due to compaction of the fine-grained compressible beds. The subsidence resulted in flooding of lands, and the compaction of the sediments caused compressional failure of many well casings. From 1967 to 1975, the artesian head recovered 70 to 100 feet due to a fivefold increase in surface water imports, favorable local water supply, decreased withdrawal, and increased recharge. In 1960, the Geological Survey installed extensometers in core holes 1,000 ft deep in San Jose and Sunnyvale. Measurements of compaction of the confined aquifer system obtained from these extensometers demonstrate the marked decrease in rate of compaction in response to the major head recovery since 1967. In San Jose the rate decreased from about 1 ft/yr in 1961 to 0.1 ft/yr in 1973. The subsidence has been stopped by raising the artesian head in the aquifers until it equaled or exceeded the maximum pore pressures in the fine-grained beds. However, the subsidence will recommence if the artesian head is drawn down appreciably below the levels of 1971-73. (USGS)

  8. The Ecological Footprint of the Agrarian Sector in Villa Clara. A qualitative approximation

    Directory of Open Access Journals (Sweden)

    Mario Reinoso Pérez

    2015-01-01

    Full Text Available This research deals with the environmental impacts and aspects and their relationship to the ecological footprint of the agrarian sector in Villa Clara. In order to achieve this goal, 23 enterprises were used as study cases, which were clustered according to the main land use: (i succession planting (17 and (ii livestock and animal production (6. The information collected was used to develop the environmental aspects and impacts matrixes associated to the productive processes in each enterprise. The environmental aspects with higher relative frequencies (> 0.60 were water and energy consumption, the existence of invasive plants, the soil use, the greenhouse gas emissions, the use of forest resources, the generation of solid wastes and the use of agro-chemicals. Such aspects are causing negative impacts on the environment, and consequently they are increasing the ecological print of the sector in this province. The use of heavy machineries, the generation of liquid and dangerous residues, the continuous grazing and the use of alien species had a significant impact with a relative frequency below 0.55. However, these environmental aspects should be under control. It is concluded that, in all of the studied cases, the environmental aspects had a negative incidence on the environment. And they contribute in many ways to increase the ecological footprint of the agrarian sector in the territory. The implementation of the Environmental Management System, according to the international standards, is recommended.

  9. Novel insights into the genetic diversity of Balantidium and Balantidium-like cyst-forming ciliates.

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    Kateřina Pomajbíková

    Full Text Available Balantidiasis is considered a neglected zoonotic disease with pigs serving as reservoir hosts. However, Balantidium coli has been recorded in many other mammalian species, including primates. Here, we evaluated the genetic diversity of B. coli in non-human primates using two gene markers (SSrDNA and ITS1-5.8SDNA-ITS2. We analyzed 49 isolates of ciliates from fecal samples originating from 11 species of captive and wild primates, domestic pigs and wild boar. The phylogenetic trees were computed using Bayesian inference and Maximum likelihood. Balantidium entozoon from edible frog and Buxtonella sulcata from cattle were included in the analyses as the closest relatives of B. coli, as well as reference sequences of vestibuliferids. The SSrDNA tree showed the same phylogenetic diversification of B. coli at genus level as the tree constructed based on the ITS region. Based on the polymorphism of SSrDNA sequences, the type species of the genus, namely B. entozoon, appeared to be phylogenetically distinct from B. coli. Thus, we propose a new genus Neobalantidium for the homeothermic clade. Moreover, several isolates from both captive and wild primates (excluding great apes clustered with B. sulcata with high support, suggesting the existence of a new species within this genus. The cysts of Buxtonella and Neobalantidium are morphologically indistinguishable and the presence of Buxtonella-like ciliates in primates opens the question about possible occurrence of these pathogens in humans.

  10. Evaluation of Enrichment Protocols for Bacterial Endosymbionts of Ciliates by Real-Time PCR.

    Science.gov (United States)

    Castelli, Michele; Lanzoni, Olivia; Rossi, Leonardo; Potekhin, Alexey; Schrallhammer, Martina; Petroni, Giulio

    2016-06-01

    Large-scale studies on obligate bacterial endosymbionts may frequently require preliminary purification and enrichment protocols, which are often elaborate to set up and to evaluate, especially if the host organism is a protist. The purpose of this study was to develop a real-time PCR-based strategy and employ it for assessing two of such enrichment protocols for Holospora caryophila, hosted by the ciliate Paramecium. Four SSU rRNA gene-targeted real-time PCR assays were designed, which allowed to compare the amount of H. caryophila to other organisms, namely the host, its food bacterium (Raoultella planticola), and free-living bacteria present in the culture medium. By the use of the real-time PCR assays in combination, it was possible to conclude that the "cell fractionation" protocol was quite successful in the enrichment of the symbiont, while the "Percoll gradient" protocol will need further refinements to be fully repeatable. The proposed approach has the potential to facilitate and encourage future studies on the yet underexplored field of bacterial endosymbionts of ciliates and other protists. It can also find valuable applications for experimental questions other than those tested, such as fast and precise assessment of symbiont abundance in natural populations and comparison among multiple coexisting symbionts.

  11. Differential localization and functional specialization of centrin analogs in the parasitic ciliate Trichodina pediculus.

    Science.gov (United States)

    Viguès, Bernard; Colombet, Jonathan; Damaj, Raghida

    2016-09-01

    Trichodinids are ciliated protozoans that reversibly attach to the tegument of marine and freshwater host-organisms via an adhesive disc. In this study, we have used permeabilized cell models of Trichodina pediculus to examine the distribution of centrins, a Ca(2+)-binding protein associated with centrioles and/or contractile filamentous structures in a large number of protists. The previous finding that filamentous material of the adhesive disc comprised a 23-kDa centrin analog suggested that this protein might be a disc-specific isoform. This possibility was explored through immunolabeling methods using two distinct antibodies, anti-ecto-endoplasmic boundary (EEB) and anti-Hscen2 previously shown to react respectively with centrin-based filament networks and with centrioles. Immunofluorescence microscopy showed that anti-EEB reacts with filamentous material of the disc but not with basal bodies. Conversely, anti-Hscen2 cross-reacted with basal bodies but failed to label any type of structure occurring in the disc area. More detailed data on localization of this protein was obtained by immunoelectron microscopy showing gold particles deposits in the lumen of basal bodies. The different patterns revealed by this immunochemical approach suggest that the two protein antigens concerned by this study are distinct centrin isoforms that presumably perform organelle-specific function in the ciliate T. pediculus.

  12. Evolutionary relationship and species separation of four morphologically similar stichotrichous ciliates (Protozoa,Ciliophora)

    Institute of Scientific and Technical Information of China (English)

    Zhenzhen Yi; John Clamp; Khaled A.S.A1-Rasheid; Abdulaziz A.Al-Khedhairy; Zigui Chen; Weibo Song

    2009-01-01

    Phylogenetic and taxonomic studies on ciliate protists using molecular approaches have been demonstrated to be very reliable to form strong conclusions and results.In the present work,species separation of some morphologically similar stichotrichous ciliates,two species of Pseudokeronopsis and two species of Apokeronopsis,was reexamined using amplified ribosomal DNA restriction analysis (PCRRFLP).Five of 10 restriction enzymes revealed species-specific polymorphic patterns,of which four similar stichotrichs could be significantly separated and identified.Among them,EcoR I offered almost no significantly different restriction fragment patterns,but the four species could be separated from one another and identified with Hae III.Distinctly different restriction digestion haplotypes and similarity indices separated the species,and were used to construct a phylogeny.Phylogenies based on ITS2 nucleotide sequences and ITS2 secondary structures supported the separation of Pseudokeronopsis and Apokeronopsis using RFLP analysis,although three Pseudokeronopsis carnea populations did not cluster together.In addition,phylogenetic analyses using multiple algorithms confirmed that these two genera formed two distinct groups within the urostylids.(C) 2008 National Natural Science Foundation of China and Chinese Academy of Sciences.Published by Elsevier Limited and Science in China Press.All rights reserved.

  13. Structures, biological activities and phylogenetic relationships of terpenoids from marine ciliates of the genus Euplotes.

    Science.gov (United States)

    Guella, Graziano; Skropeta, Danielle; Di Giuseppe, Graziano; Dini, Fernando

    2010-07-08

    In the last two decades, large scale axenic cell cultures of the marine species comprising the family Euplotidae have resulted in the isolation of several new classes of terpenoids with unprecedented carbon skeletons including the (i) euplotins, highly strained acetylated sesquiterpene hemiacetals; (ii) raikovenals, built on the bicyclo[3.2.0]heptane ring system; (iii) rarisetenolides and focardins containing an octahydroazulene moiety; and (iv) vannusals, with a unique C30 backbone. Their complex structures have been elucidated through a combination of nuclear magnetic resonance spectroscopy, mass spectrometry, molecular mechanics and quantum chemical calculations. Despite the limited number of biosynthetic experiments having been performed, the large diversity of ciliate terpenoids has facilitated the proposal of biosynthetic pathways whereby they are produced from classical linear precursors. Herein, the similarities and differences emerging from the comparison of the classical chemotaxonomy approach based on secondary metabolites, with species phylogenesis based on genetic descriptors (SSU-rDNA), will be discussed. Results on the interesting ecological and biological properties of ciliate terpenoids are also reported.

  14. Structures, Biological Activities and Phylogenetic Relationships of Terpenoids from Marine Ciliates of the Genus Euplotes

    Directory of Open Access Journals (Sweden)

    Fernando Dini

    2010-07-01

    Full Text Available In the last two decades, large scale axenic cell cultures of the marine species comprising the family Euplotidae have resulted in the isolation of several new classes of terpenoids with unprecedented carbon skeletons including the (i euplotins, highly strained acetylated sesquiterpene hemiacetals; (ii raikovenals, built on the bicyclo[3.2.0]heptane ring system; (iii rarisetenolides and focardins containing an octahydroazulene moiety; and (iv vannusals, with a unique C30 backbone. Their complex structures have been elucidated through a combination of nuclear magnetic resonance spectroscopy, mass spectrometry, molecular mechanics and quantum chemical calculations. Despite the limited number of biosynthetic experiments having been performed, the large diversity of ciliate terpenoids has facilitated the proposal of biosynthetic pathways whereby they are produced from classical linear precursors. Herein, the similarities and differences emerging from the comparison of the classical chemotaxonomy approach based on secondary metabolites, with species phylogenesis based on genetic descriptors (SSU-rDNA, will be discussed. Results on the interesting ecological and biological properties of ciliate terpenoids are also reported.

  15. A cover of glass: first report of biomineralized silicon in a ciliate, Maryna umbrellata (Ciliophora: Colpodea).

    Science.gov (United States)

    Foissner, Wilhelm; Weissenbacher, Birgit; Krautgartner, Wolf-Dietrich; Lütz-Meindl, Ursula

    2009-01-01

    Using hydrofluoric acid, scanning electron microscope-assisted X-ray microanalysis, and energy-filtered transmission electron microscopy, we present the first definite proof of biomineralized silicon [(SiO(2))](n) in a ciliophoran protist, Maryna umbrellata, a common inhabitant of ephemeral pools. In the trophic specimen, the amorphic silicon (glass) granules are accumulated in the anterior half of the body. When entering the dormant stage, most glass granules are excreted to form the surface cover of the globular resting cyst. Most likely, the silicon granules are synthesized in vesicles of the Golgi apparatus. First, nanospheres with a size of 20-40 nm are formed in a fibrous matrix; they grow to be spongious complexes, eventually becoming amorphous glass granules with an average size of 819 nm x 630 nm. In the transmission electron microscope, the silicon granules show the characteristic fracture pattern of glass known from many other silicon-bearing organisms. A literature survey suggests that silicon is very rare in ciliates. The fine structure and genesis of silicon granules in M. umbrellata are very similar to those of other organisms, including vascular plants and animals, indicating a common mechanism. Light perception and protection against mechanical stress and predators might be functions of the silicon granules in M. umbrellata. The palaeontological significance of glass cysts in ciliates is also discussed.

  16. Diversity of apostome ciliates, Chromidina spp. (Oligohymenophorea, Opalinopsidae), parasites of cephalopods of the Mediterranean Sea

    Science.gov (United States)

    2016-01-01

    Chromidina spp. are enigmatic apostome ciliates (Oligohymenophorea, Opalinopsidae) that parasitise the renal and pancreatic appendages of cephalopods. Only four species have been described, among which only three have been formally named. No DNA sequence has been reported so far. To investigate Chromidina spp. diversity, we sampled cephalopods in the Mediterranean Sea off Tunis, Tunisia, and identified two distinct Chromidina spp. in two different host species: Loligo vulgaris and Sepia officinalis. From haematoxylin-stained slides, we described morphological traits for these parasitic species and compared them to previous descriptions. We also re-described the morphology of Chromidina elegans (Foettinger, 1881) from Chatton and Lwoff’s original materials and designated a neohapantotype and paraneohapantotypes for this species. We describe a new species, Chromidina chattoni Souidenne, Florent and Grellier n. sp., found in L. vulgaris off Tunisia, and evidence for a probable novel species, found in S. officinalis off Tunisia, although this latter species presents similarities to some morphological stages previously described for Chromidina cortezi Hochberg, 1971. We amplified, for the first time, an 18S rDNA marker for these two Chromidina species. Phylogenetic analysis supports the association of Chromidina within apostome ciliates. Genetic distance analysis between 18S rDNA sequences of representative apostomes indicates Pseudocollinia as the most closely related genus to Chromidina. PMID:27530149

  17. Diversity of apostome ciliates, Chromidina spp. (Oligohymenophorea, Opalinopsidae, parasites of cephalopods of the Mediterranean Sea

    Directory of Open Access Journals (Sweden)

    Souidenne Dhikra

    2016-01-01

    Full Text Available Chromidina spp. are enigmatic apostome ciliates (Oligohymenophorea, Opalinopsidae that parasitise the renal and pancreatic appendages of cephalopods. Only four species have been described, among which only three have been formally named. No DNA sequence has been reported so far. To investigate Chromidina spp. diversity, we sampled cephalopods in the Mediterranean Sea off Tunis, Tunisia, and identified two distinct Chromidina spp. in two different host species: Loligo vulgaris and Sepia officinalis. From haematoxylin-stained slides, we described morphological traits for these parasitic species and compared them to previous descriptions. We also re-described the morphology of Chromidina elegans (Foettinger, 1881 from Chatton and Lwoff’s original materials and designated a neohapantotype and paraneohapantotypes for this species. We describe a new species, Chromidina chattoni Souidenne, Florent and Grellier n. sp., found in L. vulgaris off Tunisia, and evidence for a probable novel species, found in S. officinalis off Tunisia, although this latter species presents similarities to some morphological stages previously described for Chromidina cortezi Hochberg, 1971. We amplified, for the first time, an 18S rDNA marker for these two Chromidina species. Phylogenetic analysis supports the association of Chromidina within apostome ciliates. Genetic distance analysis between 18S rDNA sequences of representative apostomes indicates Pseudocollinia as the most closely related genus to Chromidina.

  18. Evolutionary dynamics of a conserved sequence motif in the ribosomal genes of the ciliate Paramecium

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    Lynch Michael

    2010-05-01

    Full Text Available Abstract Background In protozoa, the identification of preserved motifs by comparative genomics is often impeded by difficulties to generate reliable alignments for non-coding sequences. Moreover, the evolutionary dynamics of regulatory elements in 3' untranslated regions (both in protozoa and metazoa remains a virtually unexplored issue. Results By screening Paramecium tetraurelia's 3' untranslated regions for 8-mers that were previously found to be preserved in mammalian 3' UTRs, we detect and characterize a motif that is distinctly conserved in the ribosomal genes of this ciliate. The motif appears to be conserved across Paramecium aurelia species but is absent from the ribosomal genes of four additional non-Paramecium species surveyed, including another ciliate, Tetrahymena thermophila. Motif-free ribosomal genes retain fewer paralogs in the genome and appear to be lost more rapidly relative to motif-containing genes. Features associated with the discovered preserved motif are consistent with this 8-mer playing a role in post-transcriptional regulation. Conclusions Our observations 1 shed light on the evolution of a putative regulatory motif across large phylogenetic distances; 2 are expected to facilitate the understanding of the modulation of ribosomal genes expression in Paramecium; and 3 reveal a largely unexplored--and presumably not restricted to Paramecium--association between the presence/absence of a DNA motif and the evolutionary fate of its host genes.

  19. ATP4 and ciliation in the neuroectoderm and endoderm of Xenopus embryos and tadpoles

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    Peter Walentek

    2015-09-01

    Full Text Available During gastrulation and neurulation, foxj1 expression requires ATP4a-dependent Wnt/β-catenin signaling for ciliation of the gastrocoel roof plate (Walentek et al. Cell Rep. 1 (2012 516–527. and the mucociliary epidermis (Walentek et al. Dev. Biol. (2015 of Xenopus laevis embryos. These data suggested that ATP4a and Wnt/β-catenin signaling regulate foxj1 throughout Xenopus development. Here we analyzed whether foxj1 expression was also ATP4a-dependent in other ciliated tissues of the developing Xenopus embryo and tadpole. We found that in the floor plate of the neural tube ATP4a-dependent canonical Wnt signaling was required for foxj1 expression, downstream of or in parallel to Hedgehog signaling. In the developing tadpole brain, ATP4-function was a prerequisite for the establishment of cerebrospinal fluid flow. Furthermore, we describe foxj1 expression and the presence of multiciliated cells in the developing tadpole gastrointestinal tract. Our work argues for a general requirement of ATP4-dependent Wnt/β-catenin signaling for foxj1 expression and motile ciliogenesis throughout Xenopus development.

  20. Field-trip guide to the southeastern foothills of the Santa Cruz Mountains in Santa Clara County, California

    Science.gov (United States)

    Stoffer, Philip W.; Messina, Paula

    2002-01-01

    This field trip is an introduction to the geology of the southeastern foothills of the Santa Cruz Mountains in southern Santa Clara County. Seven stops include four short hikes to access rock exposures and views of the foothills east of Loma Prieta Peak between Gilroy and San José. Field-trip destinations highlight the dominant rock types of the "Franciscan assemblage" including outcrops of serpentinite, basalt, limestone, ribbon chert, graywacke sandstone, and shale. General discussions include how the rocks formed, and how tectonism and stream erosion have changed the landscape through time. All field trip stops are on public land; most are near reservoir dams of the Santa Clara Valley Water District. In addition, stops include examination of an Ohlone Indian heritage site and the New Almaden Mining Museum.

  1. Modeling and validation of a 3D velocity structure for the Santa Clara Valley, California, for seismic-wave simulations

    Science.gov (United States)

    Hartzell, S.; Harmsen, S.; Williams, R.A.; Carver, D.; Frankel, A.; Choy, G.; Liu, P.-C.; Jachens, R.C.; Brocher, T.M.; Wentworth, C.M.

    2006-01-01

    A 3D seismic velocity and attenuation model is developed for Santa Clara Valley, California, and its surrounding uplands to predict ground motions from scenario earthquakes. The model is developed using a variety of geologic and geophysical data. Our starting point is a 3D geologic model developed primarily from geologic mapping and gravity and magnetic surveys. An initial velocity model is constructed by using seismic velocities from boreholes, reflection/refraction lines, and spatial autocorrelation microtremor surveys. This model is further refined and the seismic attenuation is estimated through waveform modeling of weak motions from small local events and strong-ground motion from the 1989 Loma Prieta earthquake. Waveforms are calculated to an upper frequency of 1 Hz using a parallelized finite-difference code that utilizes two regions with a factor of 3 difference in grid spacing to reduce memory requirements. Cenozoic basins trap and strongly amplify ground motions. This effect is particularly strong in the Evergreen Basin on the northeastern side of the Santa Clara Valley, where the steeply dipping Silver Creek fault forms the southwestern boundary of the basin. In comparison, the Cupertino Basin on the southwestern side of the valley has a more moderate response, which is attributed to a greater age and velocity of the Cenozoic fill. Surface waves play a major role in the ground motion of sedimentary basins, and they are seen to strongly develop along the western margins of the Santa Clara Valley for our simulation of the Loma Prieta earthquake.

  2. Meiosis gene inventory of four ciliates reveals the prevalence of a synaptonemal complex-independent crossover pathway.

    Science.gov (United States)

    Chi, Jingyun; Mahé, Frédéric; Loidl, Josef; Logsdon, John; Dunthorn, Micah

    2014-03-01

    To establish which meiosis genes are present in ciliates, and to look for clues as to which recombination pathways may be treaded by them, four genomes were inventoried for 11 meiosis-specific and 40 meiosis-related genes. We found that the set of meiosis genes shared by Tetrahymena thermophila, Paramecium tetraurelia, Ichthyophthirius multifiliis, and Oxytricha trifallax is consistent with the prevalence of a Mus81-dependent class II crossover pathway that is considered secondary in most model eukaryotes. There is little evidence for a canonical class I crossover pathway that requires the formation of a synaptonemal complex (SC). This gene inventory suggests that meiotic processes in ciliates largely depend on mitotic repair proteins for executing meiotic recombination. We propose that class I crossovers and SCs were reduced sometime during the evolution of ciliates. Consistent with this reduction, we provide microscopic evidence for the presence only of degenerate SCs in Stylonychia mytilus. In addition, lower nonsynonymous to synonymous mutation rates of some of the meiosis genes suggest that, in contrast to most other nuclear genes analyzed so far, meiosis genes in ciliates are largely evolving at a slower rate than those genes in fungi and animals.

  3. Composition and distribution of planktonic ciliates in the southern South China Sea during late summer: Comparison between surface and 75 m deep layer

    Science.gov (United States)

    Liu, Huaxue; Shen, Pingping; Li, Chunhou; Chen, Zuozhi; Qi, Zhanhui; Huang, Honghui

    2016-02-01

    Ciliates are very important components in most marine ecosystem. They are trophic link between the microbial food web and grazing food chain. In this study, ciliates were collected from 11 sites in the southern South China Sea (SCS) during August 25 to September 28, 2011. Their composition and distribution at the surface and 75 m deep depth of the ocean were studied. A total of 30 species belonging to 22 genera were identified, and 22 species of 15 genera were Tintinnids. Eutintinnus fraknoii and E. stramentus were the most common species. The other dominants were strombidiids ciliates including Strombidium conicum and S. globosaneum, which were followed by the tide form, Mesodinium pulex. Ciliates abundance ranged from 46 ind L-1 to 368 ind L-1 in the open sites, 46-368 ind L-1 at surface and 73-198 ind L-1 at 75 m deep layer. In the Yongshu reef, ciliates abundance ranged from 167 ind L-1 to 365 ind L-1 in the water column, similar to that in Sanya coral reef waters. Ciliates composition showed obvious difference between surface and 75 m deep layer at station S2 ( P deep layer, salinity was negatively related to mixed layer depth ( P < 0.05), but positively to chlorophyll a concentration ( P < 0.05), indicating that the change of vertical mixing in water column influenced vertical distribution of ciliates in the southern SCS.

  4. A case history study on causation of the landslide in Santa Clara, California, USA

    Institute of Scientific and Technical Information of China (English)

    Yun Liao; Sadek M. Derrega; Craig A. Hall

    2015-01-01

    This paper presents a case history study on the geologic investigation and numerical modeling of a reactivated landslide in the County of Santa Clara, California to identify the failure mechanism. The landslide occurred on an approximately 18.3-m high, north-facing slope during March 2011. The land-slide measured about 33.5 m in width and about 51.8 m in length. Along the toe of the slope, a residential structure with a swimming pool was built on a cut and fill pad and there are several other structures present along the western side of the pad. The landslide occurred immediately to the south of the residential building and moved northward between the County Road A and the house’s side yard. The movement of the landslide resulted in damaging the west-bound traffic lane of County Road A and encroached onto the paved driveway for the residential property. An investigation was performed to identify the failure mechanism of the landslide to conclude whether Road A re-alignment by the County or prominent cutting performed along the lower portion of the slope by the homeowner during 2000 through 2004 contributed to the reactivation of the old landslide deposit. The investigation included site reconnaissance, reviewing available published geologic information, reviewing site-specific geologic and geotechnical data developed by other consultants, and performing numerical modeling. The outcomes of the investigation indicate that the primary causation for the reactivation and failure of the subject pre-existing landslide is the prominent cutting performed along the lower portion of the slope during 2000 through 2004 and water tank cut bench. The Road A re-alignment did not contribute to the reactivation of the old landslide deposit.

  5. Shaded relief aeromagnetic map of the Santa Clara Valley and vicinity, California

    Science.gov (United States)

    Roberts, Carter W.; Jachens, Robert C.

    2003-01-01

    This aeromagnetic map covers the southern portion of San Francisco Bay, the Santa Clara Valley and surrounding mountains, part of which has been modelled in threedimensions (Jachens and other, 2001). The magnetic anomaly map has been compiled from existing digital data. Data was obtained from six aeromagnetic surveys that were flown at different times, spacings and elevations. The International Geomagnetic Reference Field (IGRF) for the date of each survey had been removed in the initial processing. The resulting residual magnetic anomalies were analytically continued onto a common surface 305 m (1000 ft) above terrain. Portions of each survey were substantially above the specified flight height listed in the table. The surveys were then merged together using a commercial software package called Oasis Montage. The gray lines on the map indicate the extent of each survey. The program used these regions of overlap to determine the best fit between surveys. Black dots show probable edges of magnetic bodies defined by the maximum horizontal gradient determined using a computer program by Blakely (1995). Crystalline rocks generally contain sufficient magnetic minerals to cause variations in the Earth’s magnetic field that can be mapped by aeromagnetic surveys. Sedimentary rocks are generally weakly magnetized and consequently have a small effect on the magnetic field: thus a magnetic anomaly map can be used to “see through” the sedimentary rock cover and can convey information on lithologic contrasts and structural trends related to the underlying crystalline basement (see Nettleton,1971; Blakely, 1995). Faults often cut magnetic bodies and offset magnetic anomalies can thus be used to help determine fault motion. Serpentinite, which is highly magnetic, is often found along faults. On this map areas of low magnetic anomalies are shown in blues and green while highs are shown in reds and magentas. Faults are from Brabb and others, 1998a,1998b, Graymer and others

  6. Caracterización de la mortalidad fetal tardía en Villa Clara.

    Directory of Open Access Journals (Sweden)

    Juan Antonio Suárez González

    2011-10-01

    Full Text Available Fundamento: Eventos como la mortalidad fetal tardía agreden la evolución normal esperada en el embarazo, con una connotación en la mujer, la pareja y la comunidad. Objetivo: Caracterizar la mortalidad fetal tardía según factores asociados. Métodos: Se realizó un estudio descriptivo de las 74 muertes fetales registradas en el Hospital Universitario Ginecoobstétrico Mariana Grajales de Santa Clara, durante los años 2009 y 2010. Se analizaron las variables: edad materna, antecedentes patológicos personales maternos, edad gestacional al momento de la muerte fetal, lugar y momento de ocurrencia y causas de la muerte. Resultados: El 67,6 % de las gestantes tenían entre 20 y 35 años. La hipertensión arterial crónica y el asma bronquial fueron los antecedentes patológicos personales de mayor incidencia entre las gestantes. Ocurrieron los óbitos fetales en una edad gestacional entre 28 y 36,6 semanas fundamentalmente. El 52,7 % de las muertes ocurrieron fuera del hospital y antes del parto en 55 casos (74,3 %. Resultaron las causas más frecuentes las idiopáticas y los trastornos hipertensivos de la gestación. Conclusiones: Es necesario intensificar el control del riesgo reproductivo preconcepcional y la atención prenatal, pues sin dudas, aunque mucho se ha logrado en este sentido, los resultados del estudio muestran que en alguna medida las causas de los óbitos fetales fueron prevenibles.

  7. Tolerance of ciliated protozoan Paramecium bursaria (Protozoa,Ciliophora) to ammonia and nitrites

    Institute of Scientific and Technical Information of China (English)

    2005-01-01

    The tolerance to ammonia and nitrites in freshwater ciliate Paramecium bursaria was measured in a conventional open system. The ciliate was exposed to different concentrations of ammonia and nitrites for 2h and 12h in order to determine the lethal concentrations. Linear regression analysis revealed that the 2h-LC50 value for ammonia was 95.94 mg/L and for nitrite 27.35 mg/L using probit scale method (with 95% confidence intervals). There was a linear correlation between the mortality probit scale and logarithmic concentration of ammonia which fit by a regression equation y=7.32x-9.51 (R2=0.98; y, mortality probit scale; x, logarithmic concentration of ammonia), by which 2 h-LC50 value for ammonia was fotnd to be 95.50 mg/L. A linear correlation between mortality probit scales and logarithmic concentration of nitrite is also followed the regression equation y=2.86x+0.89 (R2=0.95; y, mortality probit scale; x, logarithmic concentration of nitrite). The regression analysis of toxicity curves showed that the linear correlation between exposed time of ammonia-N LC50 value and ammonia-N LC50 value followed the regression equation y=2862.85e-0.0ax (R2=0.95; y, duration of exposure to LC50 value; x, LC50 value), and that between exposed time of nitrite-N LC50 value and nitrite-N LC50 value followed the regression equation y = 127.15e-0.13x (R2=0.91; y, exposed time of LC50 value; x, LC50 value). The results demonstrate that the tolerance to ammonia in P. bursaria is considerably higher than that of the larvae or juveniles of some metozoa, e.g. cultured prawns and oysters. In addition, ciliates, as bacterial predators, are likely to play a positive role in maintaining and improving water quality in aquatic environments with high-level ammonium, such as sewage treatment systems.

  8. Spatiotemporal variation in community structure of marine benthic ciliates in the Yellow Sea during and after macroalgal and giant jellyfish blooms

    Science.gov (United States)

    Zhou, Bailing; Xu, Kuidong

    2016-07-01

    The annual bloom of the green macroalgal Ulva prolifera from May through July since 2008 and another of giant jellyfish Nemopilema nomurai from June through September have been frequent events in the Yellow Sea. However, the patterns of benthic ciliate communities during and after the blooms are still not known. In combination with analyses of benthic environmental factors, we investigated the distribution and community composition of benthic ciliates in the Yellow Sea in July and November 2011. In July, ciliates had high standing crops and diversity in the northern Yellow Sea, and in the inshore area off the southern Shandong Peninsula, where large numbers of green macroalgae accumulated. In November, the abundance, biomass and diversity of ciliates were high in the sea areas off the Shandong Peninsula and Changjiang estuary, where a large quantity of jellyfish occurred in August. Neither the abundance nor the biomass had significant difference between seasons, or between different compartments of the Yellow Sea. The species number, and both Margalef and Shannon-Wiener indices of ciliates were all significantly higher in November than in July. In both seasons, prostomateans and karyorelicteans consistently constituted the first and second most important ciliate groups in biomass; and carnivorous ciliates constituted the primary feeding type in terms of biomass as well as species richness, followed by bacterivores, algivores and omnivores. Compared with that in June 2007 when no macroalgae occurred, the percentage of small-sized bacterivores (e.g. Metacystis spp., Euplotes spp. and scuticociliates) increased in July 2011. The proportion of carnivorous ciliates increased in November, and this increased dominance of carnivorous ciliates may be a response to the increase in predominance of heterotrophic nanoflagellates, which might in turn be ascribed to an effect of green macroalgal and giant jellyfish blooms in the Yellow Sea.

  9. Evaluation of double formalin--Lugol's fixation in assessing number and biomass of ciliates: an example of estimations at mesoscale in NE Atlantic.

    Science.gov (United States)

    Karayanni, Hera; Christaki, Urania; Van Wambeke, France; Dalby, Andrew P

    2004-03-01

    Ciliated protozoa are potential grazers of primary and bacterial production and act as intermediaries between picoplankton and copepods and other large suspension feeders. Accurate determination of ciliate abundance and feeding mode is crucial in oceanic carbon budget estimations. However, the impact of different fixatives on the abundance and cell volume of ciliates has been investigated in only a few studies using either laboratory cultures or natural populations. Lugol's solution and formalin are the most commonly used fixatives for the preservation of ciliates samples. In the present study, the aim was to compare 0.4% Lugol's solution and 2% borated-formalin fixation and evaluate the need of counting duplicate samples each using a different fixative. For this, a large number of samples (n = 110) from the NE Atlantic was analyzed in the frame of POMME program (Multidisciplinary Mesoscale Ocean Program). We established a statistically significant relationship (p Lugol's and formalin fixed samples for both abundance (r2 = 0.50) and biomass (r2 = 0.76) of aloricate ciliates which showed that counts were higher in Lugol's solution by a factor of 2 and a non-taxon specific cell-loss in formalin. However, loricate ciliate abundance in our samples which were represented primarily by Tintinnus spp. did not show any difference between the two treatments. Abundance and biomass of mixotrophic ciliates (chloroplast-bearing cells) were for various reasons underestimated in both treatments. Our results show that unique fixation by formalin may severely underestimate ciliates abundance and biomass although their population may not alter. For this reason, Lugol's solution is best for the estimation of their abundance and biomass. However, for counts of mixotrophs and the evaluation of the ecological role of ciliates in carbon flux, double fixation is essential. Compromises regarding the fixatives have lead to severe underestimations of mixotrophs in studies conducted by now.

  10. A simplified experimental model for clearance of some pathogenic bacteria using common bacterivorous ciliated spp. in Tigris river

    Science.gov (United States)

    Ali, Talib Hassan; Saleh, Dhuha Saad

    2014-03-01

    Bacteria-specific uptake rates of three different protozoan taxa on a pure and mixed bacterial community was studied by means of a simplified and functionally reproducible experimental model. The bacterial species Shigella flexneri, Escherichia coli and Salmonella typhi were isolated and classified from stool samples of patients suffering from diarrhea. Paramecium caudatum, Tetrahymena pyriformis and Halteria grandinella, free living ciliate Protozoans, were isolated and identified from Tigris river water. Pure and mixed ( E. coli + S. typhi), ( E. coli + Sh. flexneri) bacterial cultures were used with each ciliate genera to evaluate the following: predator duplication rate, prey reduction rate, clearance rate and net grazing rate. We used selective lactose fermentation phenomena of enteric bacteria on MacConkey medium for the quantification of bacteria cultural characteristics. The final bacteria concentration was reduced by growing protozoa of 98-99.9 % compared to protozoa-free controls. It showed that Tetrahymena pyriformis had the highest duplication rate (4.13 time/day) in both types of cultures (pure and mixed), followed by Paramecium caudatum and Halteria grandinella, respectively. Paramecium caudatum had the highest rate of ingestion in both types of cultures (26 × 103 bacteria/organism/hr) and yielded the longest time required for 90 % bacterial reduction in a pure suspension of S. typhi (166 h). Clearance rates of pathogenic bacteria by ciliates ranged between 106 nanoliter/organism/h by P. caudatum to S. typhi and 1.92 nanoliter/organism/h seen in T. pyriformis in ( E. coli + S. typhi) mixed culture. We used aquatic experimental microcosms under controlled conditions to explore bacteria-dependent ciliate growth and examined whether these ciliates could discriminate between equally sized bacterial preys in a mixture.

  11. Influence of ciliated protozoa and heterotrophic nanoflagellates on the fate of primary production in the northeast Atlantic Ocean

    Science.gov (United States)

    Karayanni, Hera; Christaki, Urania; van Wambeke, France; Denis, Michel; Moutin, Thierry

    2005-07-01

    Heterotrophic nanoflagellates and ciliates and their herbivorous activity were studied within the framework of the Programme Océan Multidisciplinaire Méso Echelle (POMME) in the northeastern Atlantic between 16°-22°W and 38°-45°N during winter, spring, and late summer/autumn 2001. Ciliate ingestion rates of Synechococcus and eukaryotic algae were measured using fluorescently labeled prey. Heterotrophic nanoflagellate ingestion rates of Synechococcus and Prochlorococcus were also estimated. Heterotrophic nanoflagellate and ciliate standing stock within the surface layer (0-100 m) showed seasonal variation, with maximal values in spring (866 mg C m-2 and 637 mg C m-2, respectively). Oligotrichs dominated the ciliate assemblages, except at one site visited during spring, where a tintinnid bloom was observed. Ingestion of photosynthetic cells less than 10 μm in size was positively correlated (r = 0.7, p consumption reflected differences in the evolution of the phytoplankton bloom and in the structure of the microbial food web, both associated with the strong mesoscale hydrodynamic variability of the study area. In that context it is worthy to note that when tintinnids reached high abundances locally (1260 cells L-1), their impact as phytoplankton grazers was important and reached 69% of primary production. Generally, heterotrophic nanoflagellates and ciliates were relatively more important in determining the fate of phytogenic carbon during spring. Another interesting feature of primary production consumption was that during the autumn, when Prochlorococcus dominated the phytoplankton community, the protozoan grazing activity was ineffective in regulating the fate of primary producers.

  12. Importance and nutritional value of large ciliates for the reproduction of Acartia clausi during the post spring-bloom period in the North Sea

    DEFF Research Database (Denmark)

    Dutz, Jörg; Peters, J.

    2008-01-01

    enriched with large prey (> 20 mu m). The mineral (C, N) and lipid contents of the food suspensions were determined for size-fractionated samples to characterize the nutritional composition of prey. Large oligotrich ciliates and Strobiliidae dominated the seston biomass. Ciliates, particularly...... of the mineral and lipid content confirmed a high seston nutritional quality. The 20 to 48 mu m fraction reflected the composition of female diets and indicated an enrichment of N and polyunsaturated fatty acids (PUFA) in the diet compared to total seston. The fraction > 48 mu m consisted mostly of ciliates...

  13. Ciliated Median Raphe Cyst of Perineum Presenting as Perianal Polyp: A Case Report with Immunohistochemical Study, Review of Literature, and Pathogenesis

    Directory of Open Access Journals (Sweden)

    Jayesh Sagar

    2006-01-01

    Full Text Available Median raphe cyst is a very rare, benign congenital lesion occurring mainly on the ventral aspect of the penis, but can develop anywhere in the midline between the external urethral meatus and anus. We report a case of median raphe cyst in the perineum presenting as a perianal polyp in a 65-year-old, English white male with exceptionally rare ciliated epithelium. According to our knowledge, this is the third such case of ciliated median raphe cyst in the English literature. This case, also the first case of ciliated median raphe cyst in the perineum location, focuses on pathogenesis of median raphe cyst.

  14. New Record of Two Marine Ciliates (Ciliophora: Spirotrichea in South Korea

    Directory of Open Access Journals (Sweden)

    Kang-San Kim

    2013-04-01

    Full Text Available Two marine hypotrichous ciliates, Anteholosticha petzi and Ponturostyla enigmatica, were collected from the Yellow Sea and the Korea Strait, respectively, and described using live observation and protargol-impregnated specimens. Furthermore, the nuclear small subunit ribosomal RNA gene of each was sequenced and compared to previously annotated sequences retrieved from the GenBank. Anteholosticha petzi is characterized by 3 frontal cirri (FC, 2 frontoterminal cirri (FTC, 8-12 transverse cirri (TC, 1 buccal cirrus (BC, 9-12 midventral pairs (MP, 3 bipolar dorsal kineties (DK, and 3 types of colorless cortical granules. Ponturostyla enigmatica is characterized by 8 FC, 5 ventral cirri (VC, 5-7 TC, 6-7 marginal rows (MR on each side, 4 complete and 2-3 partial DK, and greenish cortical granules. This is the first identification and description of these 2 species, A. petzi and P. enigmatica, in South Korea.

  15. Physical hydrodynamic propulsion model study on creeping viscous flow through a ciliated porous tube

    Indian Academy of Sciences (India)

    NOREEN SHER AKBAR; ADIL WAHID BUTT; DHARMENDRA TRIPATHI; O ANWAR BÉG

    2017-03-01

    The present investigation focusses on a mathematical study of creeping viscous flow induced by metachronal wave propagation in a horizontal ciliated tube containing porous media. Creeping flow limitations are imposed, i.e. inertial forces are small compared to viscous forces and therefore a very low Reynolds number (Re $\\ll$ 1) is taken into account. The wavelength of metachronal wave is also considered to be very large for cilia movement. The physical problem is linearized and exact solutions are developed for the differential equation problem. Mathematica software is used to compute and illustrate numerical results. The influence of slip parameter and Darcy number on velocity profile, pressure gradient and trapping of bolus are discussed with the aid of graphs. It is found that with increasing magnitude of the slip parameter, the trapped bolus inside the streamlines increases in size. The study is relevant to biological propulsion of medical micromachines in drug delivery.

  16. Current status of parasitic ciliates Chilodonella spp. (Phyllopharyngea: Chilodonellidae) in freshwater fish aquaculture.

    Science.gov (United States)

    Bastos Gomes, G; Jerry, D R; Miller, T L; Hutson, K S

    2016-07-30

    Freshwater fish farming contributes to more than two-thirds of global aquaculture production. Parasitic ciliates are one of the largest causes of production loss in freshwater farmed fishes, with species from the genus Chilodonella being particularly problematic. While Chilodonella spp. include 'free-living' fauna, some species are involved in mortality events of fish, particularly in high-density aquaculture. Indeed, chilodonellosis causes major productivity losses in over 16 species of farmed freshwater fishes in more than 14 countries. Traditionally, Chilodonella species are identified based on morphological features; however, the genus comprises yet uncharacterized cryptic species, which indicates the necessity for molecular diagnostic methods. This review synthesizes current knowledge on the biology, ecology and geographic distribution of harmful Chilodonella spp. and examines pathological signs, diagnostic methods and treatments. Recent advances in molecular diagnostics and the ability to culture Chilodonella spp. in vitro will enable the development of preventative management practices and sustained freshwater fish aquaculture production.

  17. Thermodynamic Stability of Psychrophilic and Mesophilic Pheromones of the Protozoan Ciliate Euplotes

    Directory of Open Access Journals (Sweden)

    Kurt Wüthrich

    2013-01-01

    Full Text Available Three psychrophilic protein pheromones (En-1, En-2 and En-6 from the polar ciliate, Euplotes nobilii, and six mesophilic pheromones (Er-1, Er-2, Er-10, Er-11, Er-22 and Er-23 from the temperate-water sister species, Euplotes raikovi, were studied in aqueous solution for their thermal unfolding and refolding based on the temperature dependence of their circular dichroism (CD spectra. The three psychrophilic proteins showed thermal unfolding with mid points in the temperature range 55–70 °C. In contrast, no unfolding was observed for any of the six mesophilic proteins and their regular secondary structures were maintained up to 95 °C. Possible causes of these differences are discussed based on comparisons of the NMR structures of the nine proteins.

  18. Epibiotic ciliates Scyphidia sp. and diatoms on Tigriopus fulvus (Copepoda: Harpacticoida exoskeleton

    Directory of Open Access Journals (Sweden)

    Luigi Pane

    2014-12-01

    Full Text Available Several microorganisms – epibionts – can adhere to living supports taking advantage for their survival, feeding and movement. Epibiosis occurs particularly in aquatic environments, on both benthic and planktonic organisms, among which copepods and cladocerans represent an important living support. The harpacticoid copepod Tigriopus fulvus, living in the splashpools of rocky coasts, was studied to recognize the occurrence of epibionts on the exoskeleton surface using scanning electon microscopy techniques. The first evidence of ciliate Scyphidia sp. on Tigriopus fulvus has been described and the occurrence of algae Cocconeis sp. has been observed as well. Epibionts were found to adhere to antennae, a site linked to the exploitation of water currents carrying food particles to mouthparts and to swimming legs. The reason of the occurrence on swimming legs is less clear and needs further observations. Pertinent results are described and discussed and the influence of epibionts on life cycle and behavior of Tigriopus fulvus is considered.

  19. Divisional morphogenesis in the marine ciliate Anteholosticha manca(Kahl,1932) Berger,2003(Ciliophora: Urostylida)

    Institute of Scientific and Technical Information of China (English)

    LI Liqiong; HU Xiaozhong; WARREN Alan; AL-RASHEID Khaled A S; AL - FARRAJ Saleh A; SHAO Chen; SONG Weibo

    2008-01-01

    The cortical development and macronuclear evolution of the marine hypotrichous ciliate Anteholosticha manca,collected from the coastal waters near Qingdao,China,were investigated using the protargol impregnation method.The morphogenesis of A.manca is generally typical for the genus,and can be characterized as the following features:(1) in the proter,a new oral primordium is formed on the bottom (beneath the pellicle) of the buccal cavity,disorganization of the parental undulating membranes do not contribute to the formation of this primordium; (2) FVT-cirral anlagen in both dividers develop independently,and very likely on-ly a few midventral cirri join in the formation of these primordia; (3) both marginal row and dorsal kinety anlagen develop intraki-netally within the parental structure; (4) at the middle stage,macronuclear segments fuse together to form a single mass as ob-served in most of its related forms.

  20. Physical hydrodynamic propulsion model study on creeping viscous flow through a ciliated porous tube

    Science.gov (United States)

    Akbar, Noreen Sher; Butt, Adil Wahid; Tripathi, Dharmendra; Bég, O. Anwar

    2017-03-01

    The present investigation focusses on a mathematical study of creeping viscous flow induced by metachronal wave propagation in a horizontal ciliated tube containing porous media. Creeping flow limitations are imposed, i.e. inertial forces are small compared to viscous forces and therefore a very low Reynolds number (Re ≪ 1) is taken into account. The wavelength of metachronal wave is also considered to be very large for cilia movement. The physical problem is linearized and exact solutions are developed for the differential equation problem. Mathematica software is used to compute and illustrate numerical results. The influence of slip parameter and Darcy number on velocity profile, pressure gradient and trapping of bolus are discussed with the aid of graphs. It is found that with increasing magnitude of the slip parameter, the trapped bolus inside the streamlines increases in size. The study is relevant to biological propulsion of medical micromachines in drug delivery.

  1. Política social para la atención a la vejez: una necesidad para. Villa Clara Social policy for old age care: a necessity for Villa Clara

    Directory of Open Access Journals (Sweden)

    Yamila Roque Doval

    2015-12-01

    Full Text Available Resumen Villa Clara es la provincia más envejecida del país y la atención a este proceso demográfico se declara como urgente para este territorio. El artículo que se presenta constituye un resultado parcial del estudio que viene realizando, en el área de Política Social, un grupo de investigadores del proyecto Estudios de Población, que coordina el Centro de Estudios Demográficos (CEDEM, en la Universidad Central “Marta Abreu” de Las Villas. El objetivo del estudio es destacar, a partir del análisis de datos estadísticos del Censo de Población y Viviendas del 2012 ofrecidos por la Oficina Nacional de Estadísticas e Información (ONEI, la urgencia de incorporar a la estrategia de desarrollo de la provincia de Villa Clara la necesidad de la atención al adulto mayor. La muestra seleccionada está compuesta por 8 municipios de la provincia (Quemado de Güines, Sagua la Grande, Encrucijada, Cifuentes, Santa Clara, Placetas, Camajuaní y Remedios, que son los más envejecidos, según datos de la ONEI. Como resultado se propone que: la política social que se diseñe tenga como objetivo general lograr una atención eficaz a las necesidades del adulto mayor de la provincia a partir de los rasgos esenciales que caracterizan ese proceso en el territorio, que se base en valores como la solidaridad, la cooperación, que los principios que la sustenten sean de descentralización, flexibilidad en el diseño de la política, prevención, equidad, valorando siempre las necesidades y las posibilidades reales de acceso a los servicios de este grupo poblacional. Villa Clara provinceis the oldest in the country and attention to this demographic processis declared a surgent for this territory. The present article is a partial result of the study being done in the area of Social Policy, a group of researchers at the Population Studies project, coordinated by CEDEM at the Central University “Marta Abreu” of Las Villas. The aim of the studyis to

  2. Population dynamics of marine ciliate Euplotes vannus (Protozoa, Ciliophora) in different artificial seawaters

    Science.gov (United States)

    Xu, Henglong; Zhu, Mingzhuang; Jiang, Yong; Gao, Shan; Min, Gi-Sik; Al-Rasheid, Khaled A. S.

    2011-01-01

    To study population dynamics of marine ciliates in different artificial seawaters (ASW), the population growth dynamics of a common marine ciliate Euplotes vannus were investigated using beef extract media and rice media for five types of ASW and natural seawater (NSW). The results show that: (1) the population growth rate was in the order of NSW>Flack ASW>Nakamula ASW>Schmadz ASW>Oshima ASW>Subow ASW and was considerably higher in rice media than in beef extract media (apart from Subow ASW); (2) the maximum density of E. vannus in stationary phase in each treatment was ranked as Flack ASW>Nakamula ASW>Schmadz ASW>NSW>Oshima ASW>Subow ASW, and was again higher in rice media than in beef extract media (except for Subow ASW); (3) the exponential and stationary phases were longer in rice media than in beef extract media; (4) strains of E. vannus that had been domesticated for >1 year in ASW grew significantly slower, with lower maximum density and longer stationary phase than those isolated and maintained in NSW. It was demonstrated that: (1) E. vannus may grow well in Flack, Nakamula and Schmads ASW compared with NSW (mainly in terms of growth rate); and (2) Oshima ASW is the preferred choice for stock cultures of E. vannus, but the ASWs Flack, Nakamula and Schmadz are preferred for mass culture. These findings suggest that these three ASWs are effective for the cultivation of marine protozoa for experimental studies on ecology, toxicology and molecular biology.

  3. Modeling the distribution of ciliate protozoa in the reticulo-rumen using linear programming.

    Science.gov (United States)

    Hook, S E; Dijkstra, J; Wright, A-D G; McBride, B W; France, J

    2012-01-01

    The flow of ciliate protozoa from the reticulo-rumen is significantly less than expected given the total density of rumen protozoa present. To maintain their numbers in the reticulo-rumen, protozoa can be selectively retained through association with feed particles and the rumen wall. Few mathematical models have been designed to model rumen protozoa in both the free-living and attached phases, and the data used in the models were acquired using classical techniques. It has therefore become necessary to provide an updated model that more accurately represents these microorganisms and incorporates the recent literature on distribution, sequestration, and generation times. This paper represents a novel approach to synthesizing experimental data on rumen microorganisms in a quantitative and structured manner. The development of a linear programming model of rumen protozoa in an approximate steady state will be described and applied to data from healthy ruminants consuming commonly fed diets. In the model, protozoa associated with the liquid phase and protozoa attached to particulate matter or sequestered against the rumen wall are distinguished. Growth, passage, death, and transfer of protozoa between both pools are represented. The results from the model application using the contrasting diets of increased forage content versus increased starch content indicate that the majority of rumen protozoa, 63 to 90%, are found in the attached phase, either attached to feed particles or sequestered on the rumen wall. A slightly greater proportion of protozoa are found in the attached phase in animals fed a hay diet compared with a starch diet. This suggests that experimental protocols that only sample protozoa from the rumen fluid could be significantly underestimating the size of the protozoal population of the rumen. Further data are required on the distribution of ciliate protozoa in the rumen of healthy animals to improve model development, but the model described herein

  4. Consideraciones sobre el ciclo de Taenia saginata en humanos y bovinos de la provincia Villa Clara, Cuba (Considerations on the cycle of saginata Taenia in humans and bovines of the province Villa Clara, Cuba

    Directory of Open Access Journals (Sweden)

    Dr. MV Pedro De la Fe Rodríguez

    2006-04-01

    Full Text Available El objetivo del presente trabajo fue el de conocer la situación del ciclo de Taenia saginata en la provincia Villa Clara. Se estudiaron los registros de matanza del matadero ¨Chichi Padrón¨ y se valoró la inspección postmortem a los bovinos faenados en este, además fueron analizadas las encuestas aplicadas a los humanos positivos a Taenia saginata desde 1998 hasta 2001. La mayor prevalencia de Cysticercus en bovinos y de casos humanos de Taenia saginata se detectaron en los municipios Manicaragua (0,60 % y 33, Placetas (0,53 % y 28 y Santa Clara (0,40 % y 26, resultados que difirieron estadísticamente (p<0.05 con los de los demás municipios de la provincia. El sistema de vigilancia postmortem en el matadero no garantiza la inocuidad de las carnes en cuanto a la cisticercosis. La teniosis es más prevalente en personas adultas y las ocupaciones más relacionadas fueron: amas de casa (56 %, gastronomía (8,3 %, matadero (2,3 % y campesinos (2,3 %, entre los síntomas más frecuentes estaban: dolor abdominal (70 %, nauseas (68 %, debilidad (36 %, descenso de peso (31 %, diarrea (28 %, nerviosismo (20 %, insomnio (18 % y anorexia (15 %. ABSTRACT.- The objective of the present work was the study of the general characteristics of the Taenia saginata life cycle in Villa Clara province. The slaughter registrations of the ¨Chichi Padrón¨ slaughterhouse was studied and was valued the postmortem inspection of bovines. Also, it was analyzed the humans positive to Taenia saginata from 1998 to 2001. The biggest Cysticercus prevalence in bovine and human cases number of Taenia saginata were detected in the municipalities Manicaragua (0,60% and 33, Placetas (0,53% and 28 and Santa Clara (0,40% and 26, results that differed statistically (p <0.05 with those of the other municipalities in the same province. The system of postmortem surveillance in the slaughterhouse doesn't guarantee the meats innocuousness from the Cysticercus viewpoint. The teniosis

  5. A Contamination Vulnerability Assessment for the Santa Clara and San Mateo County Groundwater Basins

    Energy Technology Data Exchange (ETDEWEB)

    Moran, J E; Hudson, G B; Eaton, G F; Leif, R

    2004-01-06

    In response to concerns expressed by the California Legislature and the citizenry of the State of California, the State Water Resources Control Board (SWRCB), implemented a program to assess groundwater quality, and provide a predictive capability for identifying areas that are vulnerable to contamination. The program was initiated in response to concern over public supply well closures due to contamination by chemicals such as MtBE from gasoline, and solvents from industrial operations. As a result of this increased awareness regarding groundwater quality, the Supplemental Report of the 1999 Budget Act mandated the SWRCB to develop a comprehensive ambient groundwater-monitoring plan, and led to the initiation of the Ambient Groundwater Monitoring and Assessment (GAMA) Program. The primary objective of the GAMA Program is to assess the water quality and to predict the relative susceptibility to contamination of groundwater resources throughout the state of California. Under the GAMA program, scientists from Lawrence Livermore National Laboratory (LLNL) collaborate with the SWRCB, the U.S. Geological Survey, the California Department of Health Services (DHS), and the California Department of Water Resources (DWR) to implement this groundwater assessment program. In 2001 and 2002, LLNL carried out this vulnerability study in the groundwater basins of Santa Clara County and San Mateo County, located to the south of the city of San Francisco. The goal of the study is to provide a probabilistic assessment of the relative vulnerability of groundwater used for the public water supply to contamination from surface sources. This assessment of relative contamination vulnerability is made based on the results of two types of analyses that are not routinely carried out at public water supply wells: ultra low-level measurement of volatile organic compounds (VOCs), and groundwater age dating (using the tritium-helium-3 method). In addition, stable oxygen isotope measurements

  6. Water quality of Calero Reservoir, Santa Clara County, California, 1981-83

    Science.gov (United States)

    Clifton, D.G.; Gloege, I.S.

    1987-01-01

    Data were collected from December 1980 to September 1983 to describe water quality conditions of Calero Reservoir and the Almaden-Calero canal, Santa Clara County, California. Results show that water in Calero Reservoir and the canal generally met water quality criteria, as identified by the California Regional Water Quality Control Board San Francisco Bay Region, for municipal and domestic supply, water contact and non-contact recreation, warm water fish habitat, wildlife habitat, and fish spawning. Water temperature profiles show that Calero Reservoir can be classified as a warm monomictic reservoir. Water transparency profiles showed rapid attenuation of light with depth in the water column. The depth of the euphotic zone ranged from .5 m to 5.0 m. In winter and spring, light-extinction values generally were high throughout the water column; in summer and fall, values generally were high near the reservoir bottom. Dissolved oxygen concentrations were anion in Calero Reservoir. Concentrations of total recoverable mercury in the bottom sediments in Calero Reservoir ranged from 0.06 to 0.85 mg/kg, but concentrations in the water column were was generally < 1 mg/L. Mean total nitrogen concentration in the Reservoir was 1.00 mg/L, much of it in dissolved form (mean concentration was 0.85 mg/L). Mean total organic nitrogen concentration in Calero Reservoir was 0.65 mg/L, and mean total nitrate concentration was 0.21 mg/L. Mean total phosphorus and dissolved orthophosphorous concentrations were 0.05 and 0.019 mg/L, respectively. Net primary productivity in the euphotic zone ranged from -2,000 to 10,000 mg of oxygen/sq m/day; the median value was 930. Carlson 's trophic-state index, calculated using water transparency, total phosphorus, and chlorophyll-a values, indicated that the reservoir was eutrophic. Fecal coliform bacteria concentrations were < 20 colonies/100 ml in the reservoir and < 200 colonies/100 ml in the canal. Fecal streptococcal bacteria concentrations

  7. Ciliate community structure and interactions within the planktonic food web in two alpine lakes of contrasting transparency.

    Science.gov (United States)

    Kammerlander, Barbara; Koinig, Karin A; Rott, Eugen; Sommaruga, Ruben; Tartarotti, Barbara; Trattner, Florian; Sonntag, Bettina

    2016-11-01

    Climate warming is accelerating the retreat of glaciers and recently, many 'new' glacial turbid lakes have been created. In the course of time, the loss of the hydrological connectivity to a glacier causes, however, changes in their water turbidity and turns these ecosystems into clear ones.To understand potential differences in the food-web structure between glacier-fed turbid and clear alpine lakes, we sampled ciliates, phyto-, bacterio- and zooplankton in one clear and one glacial turbid alpine lake, and measured key physicochemical parameters. In particular, we focused on the ciliate community and the potential drivers for their abundance distribution.In both lakes, the zooplankton community was similar and dominated by the copepod Cyclops abyssorum tatricus and rotifers including Polyarthra dolichoptera, Keratella hiemalis, Keratella cochlearis and Notholca squamula. The phytoplankton community structure differed and it was dominated by the planktonic diatom Fragilaria tenera and the cryptophyte alga Plagioselmis nannoplanctica in the glacial turbid lake, while chrysophytes and dinoflagellates were predominant in the clear one.Ciliate abundance and richness were higher in the glacial turbid lake (∼4000-27 800 Ind L(-1), up to 29 species) than in the clear lake (∼570-7150 Ind L(-1), up to eight species). The dominant species were Balanion planctonicum, Askenasia cf. chlorelligera, Urotricha cf. furcata and Mesodinium cf. acarus. The same species dominated in both lakes, except for Mesodinium cf. acarus and some particle-associated ciliates, which occurred exclusively in the glacial turbid lake. The relative underwater solar irradiance (i.e. percentage of PAR and UVR at depth) significantly explained their abundance distribution pattern, especially in the clear water lake. In the glacial turbid lake, the abundance of the dominating ciliate taxa was mainly explained by the presence of predatory zooplankton.Our results revealed an unexpected high

  8. Primers to block the amplification of symbiotic apostome ciliate 18S rRNA gene in a PCR-based copepod diet study

    Science.gov (United States)

    Yi, Xiaoyan; Zhang, Huan; Liu, Guangxing

    2014-05-01

    Pelagic copepods play an important role in the marine food web. However, a full understanding of the ecological status of this zooplankton group depends on the careful study of their natural diets. In previous PCR-based copepod diet studies, we found many apostome ciliates that live symbiotically under the exoskeleton of the copepods, and their sequences were often over-represented in the 18S rRNA gene (18S rDNA) libraries. As a first step to address this issue, we designed three apostome ciliate 18S rDNA blocking primers, and tested their blocking efficiency against apostome ciliate 18s rDNA under various PCR conditions. Using a semi-quantitative PCR method, we optimized the conditions to efficiently amplify the 18S rDNA of the prey while simultaneously excluding the symbiotic apostome ciliates. This technique will facilitate PCR-based diet studies of copepods and other zooplankton in their natural environments.

  9. Presencia de Stegomastodon (Gomphotheriidae, Proboscidea en el Pleistoceno Superior de la zona costera de Santa Clara del Mar (Argentina

    Directory of Open Access Journals (Sweden)

    Alberdi, M. T.

    2008-12-01

    Full Text Available Gomphotheriidae fossil remains from shore level of Santa Clara del Mar (Mar del Plata, Argentina are described. The comparative morphological and multivariate analysis of the m3 with other South American gomphotheres remains, mainly from Argentina, Bolivia and Brazil, allow their identification as Stegomastodon platensis. This species seems better adapted to live on the middle latitudes and warm climatic conditions. The possible movement routes from north to the most austral zones or areas are discussed. Stegomastodon from South America is a big-size form which is present along the East route and in several shore areas of Ecuador and Peru. In the present work some palaeoecological and palaeogeographical considerations are included. From a radiometric AMS datum, the remains of Santa Clara del Mar are dated in the late Pleistocene (17,880 ± 60 AP.Se describen restos bien conservados de gonfoterios (Mammalia, Proboscidea encontrados en los niveles pleistocenos que afloran en los acantilados costeros de Santa Clara del Mar (Mar del Plata, Argentina. Se analizan algunos de sus caracteres más importantes y se compara con otros gonfoterios provenientes de distintas localidades de Argentina, Brasil y Bolivia. El estudio comparativo, mediante análisis multivariante del m3, permitió su identificación como Stegomastodon platensis. Nosotros consideramos que todos los Gomphotheriidae del territorio actual de Argentina deberían incluirse en un único género y una única especie: Stegomastodon platensis. Esta especie parece estar mejor adaptada a vivir en latitudes medias, y en condiciones climáticas templadas. Se discuten sus posibles vías de desplazamiento desde el norte hacia zonas o áreas más australes. Stegomastodon de América del Sur es una forma de gran tamaño, que se encuentra a lo largo de la ruta del este y en algunas áreas costeras de Ecuador y Perú. En el presente artículo se incluyen algunas consideraciones paleoecológicas y

  10. Un fardo funerario procedente de Huaca Santa Clara, valle de Virú (ca. 1150 a. D.)

    OpenAIRE

    2013-01-01

    En este artículo se describen los textiles de un fardo funerario descubierto en Huaca Santa Clara, en el valle de Virú, el cual contenía los restos de un niño pequeño acompañado por otros niños y llamas sacrificadas. Los tejidos asociados a este entierro intrusivo —realizado unos cuatro siglos después del abandono del sitio por los miembros de la sociedad Virú— resultan de fundamental importancia dado que no solamente nos ayudan a entender la naturaleza de este complejo evento ritual sino que...

  11. Características físico-químicas e produtivas da videira 'BRS Clara' sob cultivo protegido

    Directory of Open Access Journals (Sweden)

    Larissa Abgariani Colombo

    2011-09-01

    Full Text Available Atualmente, a preferência por uvas sem sementes vem aumentando nos mercados interno e externo, sendo uma alternativa a produção de uvas sob cultivo protegido. No entanto, o custo de produção de uvas finas para mesa tem sido afetado pela intensa necessidade de controle de doenças fúngicas, como o míldio (Plasmopara viticola. O trabalho teve como objetivo avaliar a produção e as características físicoquímicas dos frutos da videira 'BRS Clara' sobre os porta-enxertos 'IAC 572 Jales' e 'IAC 766 Campinas', sob diferentes tipos de cultivo protegido. O experimento foi realizado no município de Marialva-PR, durante duas safras regulares (set.-dez.2007, ago-dez.2008. O delineamento experimental foi o de blocos ao acaso, com quatro repetições, em arranjo fatorial 7 x 2 (sete tipos de cultivo protegido e dois porta-enxertos. Os tratamentos foram os seguintes tipos de cultivo: a. tela plástica sem fungicidas para míldio; b. tela plástica com fungicidas para míldio (padrão de controle da região; c. cobertura plástica sem fungicidas para míldio; d. cobertura plástica e 50% de redução do padrão de fungicidas para míldio; e. cobertura plástica e 75% de redução do padrão de fungicidas para míldio; f. cobertura plástica com fosfito e cobre, e g. cobertura plástica sem fungicidas. Verificou-se que o cultivo protegido não alterou as características produtivas da videira 'BRS Clara', como número de cachos e produção por planta; os porta-enxertos 'IAC 766' e 'IAC 572' são indicados para a produção da uva 'BRS Clara', e a utilização da cobertura plástica permite a redução do número de aplicações de fungicidas para míldio no cultivo da uva 'BRS Clara'.

  12. Predicted Liquefaction in the Greater Oakland and Northern Santa Clara Valley Areas for a Repeat of the 1868 Hayward Earthquake

    Science.gov (United States)

    Holzer, T. L.; Noce, T. E.; Bennett, M. J.

    2008-12-01

    Probabilities of surface manifestations of liquefaction due to a repeat of the 1868 (M6.7-7.0) earthquake on the southern segment of the Hayward Fault were calculated for two areas along the margin of San Francisco Bay, California: greater Oakland and the northern Santa Clara Valley. Liquefaction is predicted to be more common in the greater Oakland area than in the northern Santa Clara Valley owing to the presence of 57 km2 of susceptible sandy artificial fill. Most of the fills were placed into San Francisco Bay during the first half of the 20th century to build military bases, port facilities, and shoreline communities like Alameda and Bay Farm Island. Probabilities of liquefaction in the area underlain by this sandy artificial fill range from 0.2 to ~0.5 for a M7.0 earthquake, and decrease to 0.1 to ~0.4 for a M6.7 earthquake. In the greater Oakland area, liquefaction probabilities generally are less than 0.05 for Holocene alluvial fan deposits, which underlie most of the remaining flat-lying urban area. In the northern Santa Clara Valley for a M7.0 earthquake on the Hayward Fault and an assumed water-table depth of 1.5 m (the historically shallowest water level), liquefaction probabilities range from 0.1 to 0.2 along Coyote and Guadalupe Creeks, but are less than 0.05 elsewhere. For a M6.7 earthquake, probabilities are greater than 0.1 along Coyote Creek but decrease along Guadalupe Creek to less than 0.1. Areas with high probabilities in the Santa Clara Valley are underlain by latest Holocene alluvial fan levee deposits where liquefaction and lateral spreading occurred during large earthquakes in 1868 and 1906. The liquefaction scenario maps were created with ArcGIS ModelBuilder. Peak ground accelerations first were computed with the new Boore and Atkinson NGA attenuation relation (2008, Earthquake Spectra, 24:1, p. 99-138), using VS30 to account for local site response. Spatial liquefaction probabilities were then estimated using the predicted ground motions

  13. Structure and Velocities of the Northeastern Santa Cruz Mountains and the Western Santa Clara Valley, California, from the SCSI-LR Seismic Survey

    Science.gov (United States)

    Catchings, R.D.; Goldman, M.R.; Gandhok, G.

    2006-01-01

    Introduction: The Santa Clara Valley is located in the southern San Francisco Bay area of California and generally includes the area south of the San Francisco Bay between the Santa Cruz Mountains on the southwest and the Diablo Ranges on the northeast. The area has a population of approximately 1.7 million including the city of San Jose, numerous smaller cities, and much of the high-technology manufacturing and research area commonly referred to as the Silicon Valley. Major active strands of the San Andreas Fault system bound the Santa Clara Valley, including the San Andreas fault to the southwest and the Hayward and Calaveras faults to the northeast; related faults likely underlie the alluvium of the valley. This report focuses on subsurface structures of the western Santa Clara Valley and the northeastern Santa Cruz Mountains and their potential effects on earthquake hazards and ground-water resource management in the area. Earthquake hazards and ground-water resources in the Santa Clara Valley are important considerations to California and the Nation because of the valley's preeminence as a major technical and industrial center, proximity to major earthquakes faults, and large population. To assess the earthquake hazards of the Santa Clara Valley better, the U.S. Geological Survey (USGS) has undertaken a program to evaluate potential earthquake sources and potential effects of strong ground shaking within the valley. As part of that program, and to better assess water resources of the valley, the USGS and the Santa Clara Valley Water District (SCVWD) began conducting collaborative studies to characterize the faults, stratigraphy, and structures beneath the alluvial cover of the Santa Clara Valley in the year 2000. Such geologic features are important to both agencies because they directly influence the availability and management of groundwater resources in the valley, and they affect the severity and distribution of strong shaking from local or regional

  14. - Evaluación de los factores que inciden en la mortalidad por fasciolosis en la provincia de Villa Clara, Cuba (Evaluation of factors that impact in the mortality by fascioliasis in villa clara province, Cuba

    Directory of Open Access Journals (Sweden)

    María del Rosario León Beovides

    2006-02-01

    Full Text Available Resumen. Se analizó retrospectivamente el comportamiento de la mortalidad por fasciolosis en bovinos en la provincia de Villa Clara (Cuba correlacionándose la información estadística correspondiente a la mortalidad por sectores con los resultados de visitas realizadas a las direcciones municipales del Instituto de Medicina Veterinaria, con el fin de evaluar el cumplimiento de las medidas de Programa de Prevención de Enfermedades. Se demostró que el incremento en el índice de mortalidad por fasciolosis en la provincia se corresponde con los incumplimientos de las medidas establecidas para su control Abstract. It was retrospectively analyzed the behavior of mortality by fascioliasis in bovine in Villa Clara Province (Cuba, correlating the statistical information that corresponds to the mortality by sectors with the results of visits carried out to the municipal directions of the Institute of Veterinary Medicine, with the purpose of evaluating the execution of measures of Disease Prevention Program. It was demonstrated that the increase in mortality index by fascioliasis in the province corresponds with the non-fulfillments of established measures for its control.

  15. Liquefaction Hazard Maps for Three Earthquake Scenarios for the Communities of San Jose, Campbell, Cupertino, Los Altos, Los Gatos, Milpitas, Mountain View, Palo Alto, Santa Clara, Saratoga, and Sunnyvale, Northern Santa Clara County, California

    Science.gov (United States)

    Holzer, Thomas L.; Noce, Thomas E.; Bennett, Michael J.

    2008-01-01

    Maps showing the probability of surface manifestations of liquefaction in the northern Santa Clara Valley were prepared with liquefaction probability curves. The area includes the communities of San Jose, Campbell, Cupertino, Los Altos, Los Gatos Milpitas, Mountain View, Palo Alto, Santa Clara, Saratoga, and Sunnyvale. The probability curves were based on complementary cumulative frequency distributions of the liquefaction potential index (LPI) for surficial geologic units in the study area. LPI values were computed with extensive cone penetration test soundings. Maps were developed for three earthquake scenarios, an M7.8 on the San Andreas Fault comparable to the 1906 event, an M6.7 on the Hayward Fault comparable to the 1868 event, and an M6.9 on the Calaveras Fault. Ground motions were estimated with the Boore and Atkinson (2008) attenuation relation. Liquefaction is predicted for all three events in young Holocene levee deposits along the major creeks. Liquefaction probabilities are highest for the M7.8 earthquake, ranging from 0.33 to 0.37 if a 1.5-m deep water table is assumed, and 0.10 to 0.14 if a 5-m deep water table is assumed. Liquefaction probabilities of the other surficial geologic units are less than 0.05. Probabilities for the scenario earthquakes are generally consistent with observations during historical earthquakes.

  16. El dinamismo transformador del agua y de la luz en Atisbos de luz de Bella Clara Ventura Transformative Dynamics of Water and Light in Atisbos de Luz by Bella Clara Ventura

    Directory of Open Access Journals (Sweden)

    Jorge Chen Sham

    2011-12-01

    Full Text Available En Atisbos de luz (2007, la poeta colombomexicana Bella Clara Ventura nos invita a sopesar y a valorar el dinamismo transformador de la luz en su complemento con el agua fecunda y fluyente. Ésta es la clave no sólo para poder ingresar en el universo poético trazado como una aventura de iniciación hacia la luminosidad del cosmos, sino también para emprender el camino de una iniciación estética que se propone como indagación y reflexión, abierta a inquirir el cosmos y la escritura poética.In Atisbos de luz (2007 the Colombian-Mexican poet Bella Clara Ventura invites the reader to ponder and appraise the transformative dynamics of light in relation to a fecund, flowing water. This is not only the key to enter a poetic world presented as an adventure of initiation into the luminosity of the cosmos, but it is also the first step in the journey of an aesthetic initiation through inquiry and reflection for comprehending the universe and poetic writing.

  17. Clara Schumann, Teresa Carreño, Rosita Renard: la condición de mujer en sus carreras musicales Clara Schumann, Teresa Carreño, Rosita Renard: Their Female Condition in their Musical Careers

    Directory of Open Access Journals (Sweden)

    Miguel Castillo Didier

    2010-06-01

    Full Text Available Clara Wieck, después Schumann, alemana, Teresa Carreño, venezolana, Rosita Renard, chilena, se distinguen como algunas de las más destacadas pianistas a lo largo de un poco más de una centuria, desde algo antes de mediados del siglo XIX a la mitad del XX. Hay paralelismos y también contrastes en sus vidas y sus carreras. Pero tanto el transcurrir de sus existencias como el del quehacer musical al que se dedicaron están marcados por hechos ligados a su condición de mujeres. Tratamos de hacer un paralelo entre sus vidas y entre el desarrollo de sus carreras destacando las particularidades y dificultades que en ambos planos les impuso la condición de mujeres.Clara Wieck, later Schumann, Germán, Teresa Carreño, Venezuelan, Rosita Renard, Chilean, have all of them distinguished as some ofthe most outstandingpianists along a little more than a century, from befare the mid 19th century fo the mid 20th. There are parallelisms and contrasts in their Uves and careers. Rut their Uves as well as their musical development were strongly affected by facts linked to their condition as women. We have tried to establish these parálisis, higlighting particularities and difficulties arisingfrom their condition of women.

  18. Ephemeral stream reaches preserve the evolutionary and distributional history of threespine stickleback in the Santa Clara and Ventura River watersheds of southern California

    Science.gov (United States)

    Richmond, Jonathan Q.; Jacobs, David K.; Backlin, Adam R.; Swift, Camm C.; Dellith, Chris; Fisher, Robert N.

    2015-01-01

    Much remains to be understood about the evolutionary history and contemporary landscape genetics of unarmored threespine stickleback in southern California, where populations collectively referred to as Gasterosteus aculeatus williamsoni have severely declined over the past 70+ years and are now endangered. We used mitochondrial sequence and microsatellite data to assess the population genetics and phylogeography of unarmored populations sampled immediately downstream from the type locality of G. a. williamsoni in the upper Santa Clara River, and assessed their distinctiveness with respect to low-armor populations in the downstream sections of the river and the adjacent Ventura River. We also characterized the geographic limits of different plate morphs and evaluated the congruence of those boundaries with barriers to dispersal in both river systems and to neutral genetic variation. We show substantial population structuring within the upper reach of the Santa Clara River, but little partitioning between the lower Santa Clara and Ventura Rivers—we attribute these patterns to different ancestry between spatially subdivided populations within the same drainage, a predominance of downstream gene flow, and ability for coastal dispersal between the Santa Clara and Ventura Rivers. We also show that alleles from introduced low-plate stock have infiltrated a native population in at least one upper Santa Clara River tributary, causing this formerly unarmored population to become gradually low-plated over a 30 + year time period. Measures of genetic diversity, census surveys, and severe habitat disturbance all indicate that unarmored stickleback near the type locality are currently at high risk of extinction.

  19. Structure and seasonal dynamics of the protozoan community (heterotrophic flagellates, ciliates, amoeboid protozoa) in the plankton of a large river (River Danube, Hungary).

    Science.gov (United States)

    Kiss, Aron Keve; Acs, Eva; Kiss, Keve Tihamér; Török, Júlia Katalin

    2009-05-01

    Seasonal dynamics of all major protozoan groups were investigated in the plankton of the River Danube, upstream of Budapest (Hungary), by bi-weekly sampling over a 1-year long period. Sixty-one heterotrophic flagellate, 14 naked amoeba, 50 testate amoeba, 4 heliozoan and 83 ciliate morphospecies were identified. The estimated abundance ranges of major groups throughout the year were as follows: heterotrophic flagellates, 0.27-7.8 x 10(6)ind.l(-1); naked amoebae, max. 3300ind.l(-1); testaceans, max. 1600ind.l(-1); heliozoans, max. 8500ind.l(-1); ciliates, 132-34,000ind.l(-1). In terms of biovolume, heterotrophic flagellates dominated throughout the year (max. 0.58mm(3)l(-1)), and ciliates only exceeded their biovolume in summer (max. 0.76mm(3)l(-1)). Naked amoeba and heliozoan biovolume was about one, and testacean biovolume 1-3, orders of magnitude lower than that of ciliates. In winter, flagellates, mainly chrysomonads, had the highest biomass, whilst ciliates were dominated by peritrichs. In 2005 from April to July a long spring/summer peak occurred for all protozoan groups. Beside chrysomonads typical flagellates were choanoflagellates, bicosoecids and abundant microflagellates (large chrysomonads and Collodictyon). Most abundant ciliates were oligotrichs, while Phascolodon, Urotricha, Vorticella, haptorids, Suctoria, Climacostomum and Stokesia also contributed significantly to biovolume during rapid succession processes. In October and November a second high protozoan peak occurred, with flagellate dominance, and slightly different taxonomic composition.

  20. [Relationship of bacteria of Bacillus genus with ciliate Colpoda steinii and their impact on germination of plant seeds].

    Science.gov (United States)

    Pogorelova, V V; Bega, Z T; Kurdish, I K

    2012-01-01

    Features of symbiotic coexistence of bacteria of the genus Bacillus with ciliates Colpoda steinii have been studied. In their mutual cultivation during 10 days the number of bacteria B. subtilis IMV V-7023 was reduced 4.4 times, B. pumilus 3 - 3.4 times, B. megaterium 12 - 2.5 times. In the mixed culture with B. pumilus 3 the number of the ciliates increased gradualluy while under availability of the other two bacilli strains the number of protozoan increased in the first two days, after that their amount decreased. Treatment of some plants seeds by suspension of B. subtilis IMV V-7023 with the protozoan increased their germination and stimulated the growth of plants at the early stages of development.

  1. Ectopic Ciliated Cyst in the Mandible Secondary to Genioplasty and Lefort after Two Years: A Case Report and Literature Review

    Science.gov (United States)

    Seifi, Safoura; Sohanian, Shabnam; Khakbaz, Oveis; Abesi, Farida; Aliakbarpour, Fatemeh; Rayani, Arezoo

    2016-01-01

    Introduction: The ectopic ciliated cyst is a rare non-odontogenic cyst which occurs as a delayed complication after maxillary sinus radical surgery; this lesion emerges due to the destruction of the sinus mucosa during the surgery and entrapment of the respiratory epithelium in the region. This lesion has been observed in very rare cases following genioplasty and bimaxillary orthognathic surgery. Case Report: We reported a case of the ectopic ciliated cyst in in the mandible of a 37-year-old Iranian woman following genioplasty and Lefort 1 surgery after 2 years. Its treatment was enucleation. Conclusion: Long-term follow-up after cosmetic surgery of both jaws is recommended due to the probability of this cyst. PMID:27738612

  2. Blooms of a benthic ciliate, Maristentor dinoferus (Heterotrichea: Maristentoridae, on coral reefs of Guam, Mariana Islands. (Note

    Directory of Open Access Journals (Sweden)

    Schefter, M.

    2012-05-01

    Full Text Available Maristentor dinoferus is visible in situ with the naked eye; it forms aggregations at several scales: individuals form dynamic clusters within colonies that are normally widely scattered, but in recurrent blooms during the dry seasons of 2005 through 2007, colonies often formed close together in patches (metapopulations. Patches were extremely abundant in Guam, both in Apra Harbor and on the outer coast. This is the first time that long-term changes in a benthic ciliate population have been documented in situ and that multi-scale patchiness has been reported for a benthic ciliate. Colonies were mapped and monitored; some patches over 1 m diameter were recorded. Since 2008, the distribution has again consisted of scattered colonies, as it did from 1999–2004.

  3. Prevalencia de antigenos fimbriales f4 y f18 en cerditos lactantes y destetados diarreicos en la provincia de Villa Clara, Cuba (Prevalence of f4 and f18 fimbrial antigens in diarrheal nursing and weaned piglets of the province of Villa Clara.

    Directory of Open Access Journals (Sweden)

    Castillo Cuenca. Julio César

    2012-06-01

    Full Text Available RESUMENEl presente trabajo se realizó con el objetivo de determinar la prevalencia de antígenos fimbriales F4 y F18 en cerditos lactantes y destetados diarreicos de la Provincia de Villa Clara.SUMMARYThe present work was carried out with the objective of determining the prevalence of F4 and F18 fimbrial antigens in diarrheal nursing and weaned piglets of the Province of Villa Clara.

  4. The influence of environmental characteristics on the distribution of ciliates (Protozoa, Ciliophora in an urban stream of southeast Brazil

    Directory of Open Access Journals (Sweden)

    RJP. Dias

    Full Text Available The aim of this research was to study the ciliated protozoa community at three sampling stations that receive different levels of domestic sewage along the São Pedro Stream in the municipality of Juiz de Fora, Minas Gerais, Brazil, in order to determine the influence of organic pollution on this community and to assess the feasibility of using ciliates as water quality indicators. Four physical-chemical parameters of the water samples were evaluated: dissolved oxygen concentration, electrical conductivity, pH and temperature. The sediment was obtained manually, using dredges with capacity of 300 mL, at each collection point. Point 1 was located in a rural region that receives a low sewage load, while Points 2 and 3 were located in populated regions receiving high sewage loads. We found 22 ciliate species, of which 18 are included in the saprobic system and are considered bioindicators. These showed beta-mesosaprobic environments at Point 1 and alfa-mesosaprobic to polisaprobic environments at Points 2 and 3. The low levels of dissolved oxygen and the high electrical conductivity values at Points 2 and 3, together with the strong similarity between the ciliate taxocenoses of these points and the weak similarity between Point 1 and the other two, confirm the high sewage loads received at the latter two points. The combination of the biological indicators and physical-chemical analyses therefore proved itself to be an efficient method of evaluating water quality, and has excellent potential to support decisions on the conservation of headwaters and recuperation of degraded environments in lotic systems.

  5. Blooms of a benthic ciliate, Maristentor dinoferus (Heterotrichea: Maristentoridae), on coral reefs of Guam, Mariana Islands. (Note)

    OpenAIRE

    Schefter, M.; Lobban, C.S.

    2012-01-01

    Maristentor dinoferus is visible in situ with the naked eye; it forms aggregations at several scales: individuals form dynamic clusters within colonies that are normally widely scattered, but in recurrent blooms during the dry seasons of 2005 through 2007, colonies often formed close together in patches (metapopulations). Patches were extremely abundant in Guam, both in Apra Harbor and on the outer coast. This is the first time that long-term changes in a benthic ciliate population have been ...

  6. Can the halophilic ciliate Fabrea salina be used as a bio-control of microalgae blooms in solar salterns?

    Science.gov (United States)

    Hong, Hyun Pyo; Choi, Joong Ki

    2015-09-01

    The microlage Dunaliella salina, a major producer in salterns, is a serious problem for salt production. In this study we tried to assess if Fabrea salina can control D. salina. By parameterising numerical and functional response (growth and grazing vs prey abundance, respectively) at 90 psu and 30°C, where the ciliate is abundant and grows well, we developed a predator-prey model. The model is used to explore how change in microalga growth rate affect the dynamics, and the functional response is used in combination with field data to assess the potential impact of F. salina on D. salina. Over the 20 d simulation the ciliate controlled the prey population under all prey growth rates; although once D. salina were exhausted below the threshold level, F. salina died due to starvation, allowing the alga to increase in abundance, resulting in one or two predatorprey cycle, depending on prey growth rate. In general, the model predicted trends observed by others in the field, suggesting that it provided a good prediction of what may occur under the conditions we examined. Likewise we show that the ciliate can have a high impact on microalgal populations in the field. Finally, a literature review indicated that F. salina could be a good competitor with other protozoa and metazoan in salterns, depending on salinity and temperature, which requires further study and attention. In summary, we encourage continued studies on this unique ciliate on solar salterns and suggest that it may be useful in the bio-control of micoalgae.

  7. Determination of trace elements in freshwater rotifers and ciliates by total reflection X-ray fluorescence spectrometry

    Science.gov (United States)

    Woelfl, S.; Óvári, M.; Nimptsch, J.; Neu, T. R.; Mages, M.

    2016-02-01

    Element determination in plankton is important for the assessment of metal contamination of aquatic environments. Until recently, it has been difficult to determine elemental content in rotifers or ciliates derived from natural plankton samples because of the difficulty in handling and separation of these fragile organisms. The aim of this study was to evaluate methods for separation of rotifers and large ciliates from natural plankton samples (μg range dry weight) and subsequent analysis of their elemental content using total-reflection X-ray fluorescence spectrometry (TXRF). Plankton samples were collected from different aquatic environments (three lakes, one river) in Chile, Argentina and Hungary. From one to eighty specimens of five rotifer species (Brachionus calyciflorus, Brachionus falcatus, Asplanchna sieboldii, Asplanchna sp., Philodina sp.) and four to twelve specimens of one large ciliate (Stentor amethystinus) were prepared according to the dry method originally developed for microcrustaceans, and analysed by TRXF following in situ microdigestion. Our results demonstrated that it possible to process these small and fragile organisms (individual dry mass: 0.17-9.39 μg ind- 1) via careful washing and preparation procedures. We found species-dependent differences of the element mass fractions for some of the elements studied (Cr, Mn, Fe, Ni, Cu, Zn, As, Pb), especially for Cu, Fe and Mn. One large rotifer species (A. sieboldii) also showed a negative correlation between individual dry weight and the element content for Pb, Ni and Cr. We conclude that our application of the in situ microdigestion-TRXF method is suitable even for rotifers and ciliates, greatly expanding the possibilities for use of plankton in biomonitoring of metal contamination in aquatic environments.

  8. De Palacio a Monasterio. Génesis y transformación del Real Monasterio de Santa Clara de Sevilla

    Directory of Open Access Journals (Sweden)

    Oliva Muñoz, Pablo

    2011-12-01

    Full Text Available The convent of Santa Clara is one of the largest religious buildings in Seville. Founded in 1289, it became the oldest second one in the city after that of San Clemente, which is located in the same northwestern area of the old Almohad wall. The comprehensive study of the building, as part of the rehabilitation project, has allowed knowing its evolution and the survival of structures previous to the granting of the land where it is sited.El convento de Santa Clara es uno de los edificios de carácter religioso más grandes de Sevilla. Fundado en 1289 se convierte en el segundo más antiguo de la ciudad tan sólo precedido por el de San Clemente que se ubica en el mismo sector del extremo Noroeste de la antigua cerca almohade. El estudio integral del edificio como parte del proyecto de rehabilitación nos ha permitido conocer su evolución y la pervivencia de estructuras heredadas previas a la concesión de los terrenos que ahora ocupa.

  9. 70 anos da guerreira: a mestiçagem brasileira na tradução musical de Clara Nunes

    Directory of Open Access Journals (Sweden)

    Expedito Leandro Silva

    2014-01-01

    Full Text Available Clara Francisca Gonçalves Pinheiro. Stage Name: Clara Nunes. On August 12, 2012 this vigorous woman from Paraopeba in the state of Minas Gerais would have turned 70 years old. Her family life, in the context of culture and religion, contributed to her musical de- velopment from an early age broadening her contact with folk music. In this sense, her songs started dialoging with the world of samba and with the universe of African-Brazilian religions. Among the songs that best represent the artist portrayal are “Canto das Três Raças” and “Brasil Mestiço Santuário da Fé”, sang by her in the 1980s, the lyrics and interpretation showed the social Brazilian ethnological context in great detail. However, the cries of the people and the musical manifestation reproduced in the songs present an ideology of nationhood whose identity is the Brazilian miscegenation which means the cultures of the native Indians, the white and the black people.

  10. A arquitetônica de Luna Clara e Apolo Onze: uma reflexão metalinguística

    Directory of Open Access Journals (Sweden)

    Adail Sobral

    2013-11-01

    Full Text Available Este artigo propõe uma reflexão metalinguística acerca do percurso metodológico de que resultou a pesquisa de mestrado intitulada Luna Clara e Apolo Onze: uma organização criativa de vozes, que descreve a arquitetônica autoral da obra. Mais especificamente, pretende-se mostrar como, a partir dos princípios da análise dialógica do discurso, e de um exame preliminar do corpus - o livro de Adriana Falcão, Luna Clara e Apolo Onze, a pesquisadora desenvolveu uma maneira específica de descrever a arquitetônica deste que é um texto verbal que integra recursos visuais. Pretende ainda refletir acerca de como, no âmbito da concepção dialógica, se pode construir um objeto de estudo, e uma maneira de estudá-lo, partindo da observação de um fenômeno como um livro e de seu exame mediante conceitos compatíveis com esse objeto, em vez de aplicar categorias prontas.

  11. Breast- and cervical-cancer screening among Korean women--Santa Clara County, California, 1994 and 2002.

    Science.gov (United States)

    2004-08-27

    Asians account for an increasing proportion of the U.S. population. Koreans are the fifth largest Asian subpopulation, totaling 1.2 million in 2000. In Santa Clara County (2000 population: 1.7 million), California, Koreans constitute 1.3% of the population. In 1994 and 2002, two population-based surveys were conducted among Korean women (2000 population: approximately 12,000) in Santa Clara County regarding breast- and cervical-cancer screening. The results were contrasted with two surveys of the general population of California women conducted during the same years. This report summarizes the findings of those surveys, which indicated that Korean women received less frequent breast- and cervical-cancer screening compared with all California women. This report also assesses compliance with the 2010 national health objectives for Papanicolaou (Pap) tests and mammography screening. Multifaceted community programs that include culturally and linguistically sensitive education of community members and their health-care providers, along with improved health-care access, will be required to achieve the 2010 national health objectives.

  12. Hb Santa Clara (beta 97His-->Asn), a human haemoglobin variant: functional characterization and structure modelling.

    Science.gov (United States)

    De Rosa, Maria Cristina; Carelli Alinovi, Cristiana; Schininà, Maria Eugenia; Clementi, Maria Elisabetta; Amato, Antonio; Cappabianca, Maria Pia; Pezzotti, Michela; Giardina, Bruno

    2007-10-01

    This study examines the functional and structural effects of amino acid substitution at alpha(1)beta(2) interface of Hb Santa Clara (beta 97His-->Asn). We have characterized the variation by a combination of electrospray ionisation mass spectrometry and DNA sequence analysis followed by oxygen-binding experiments. Functional studies outlined an increased oxygen affinity, reduced effect of organic phosphates and a reduced Bohr effect with respect to HbA. In view of the primary role of this interface in the cooperative quaternary transition from the T to R conformational state, a theoretical three-dimensional model of Hb Santa Clara was generated. Structural investigations suggest that replacement of Asn for His beta 97 results in a significant stabilization of the high affinity R-state of the haemoglobin molecule with respect to the low affinity T-state. The role of beta FG4 position has been further examined by computational models of known beta FG4 variants, namely Hb Malmö (beta 97His-->Gln), Hb Wood (beta 97His-->Leu), Hb Nagoya (beta 97His-->Pro) and Hb Moriguchi (beta 97His-->Tyr). These findings demonstrate that, among the various residues at the alpha(1)beta(2) (and alpha(2)beta(1)) intersubunit interface, His beta FG4 contributes significantly to the quaternary constraints that are responsible for the low oxygen affinity of human deoxyhaemoglobin.

  13. The Quaternary Silver Creek Fault Beneath the Santa Clara Valley, California

    Science.gov (United States)

    Wentworth, Carl M.; Williams, Robert A.; Jachens, Robert C.; Graymer, Russell W.; Stephenson, William J.

    2010-01-01

    The northwest-trending Silver Creek Fault is a 40-km-long strike-slip fault in the eastern Santa Clara Valley, California, that has exhibited different behaviors within a changing San Andreas Fault system over the past 10-15 Ma. Quaternary alluvium several hundred meters thick that buries the northern half of the Silver Creek Fault, and that has been sampled by drilling and imaged in a detailed seismic reflection profile, provides a record of the Quaternary history of the fault. We assemble evidence from areal geology, stratigraphy, paleomagnetics, ground-water hydrology, potential-field geophysics, and reflection and earthquake seismology to determine the long history of the fault in order to evaluate its current behavior. The fault formed in the Miocene more than 100 km to the southeast, as the southwestern fault in a 5-km-wide right step to the Hayward Fault, within which the 40-km-long Evergreen pull-apart basin formed. Later, this basin was obliquely cut by the newly recognized Mt. Misery Fault to form a more direct connection to the Hayward Fault, although continued growth of the basin was sufficient to accommodate at least some late Pliocene alluvium. Large offset along the San Andreas-Calaveras-Mt Misery-Hayward Faults carried the basin northwestward almost to its present position when, about 2 Ma, the fault system was reorganized. This led to near abandonment of the faults bounding the pull-apart basin in favor of right slip extending the Calaveras Fault farther north before stepping west to the Hayward Fault, as it does today. Despite these changes, the Silver Creek Fault experienced a further 200 m of dip slip in the early Quaternary, from which we infer an associated 1.6 km or so of right slip, based on the ratio of the 40-km length of the strike-slip fault to a 5-km depth of the Evergreen Basin. This dip slip ends at a mid-Quaternary unconformity, above which the upper 300 m of alluvial cover exhibits a structural sag at the fault that we interpret as

  14. Connecting alveolate cell biology with trophic ecology in the marine plankton using the ciliate Favella as a model.

    Science.gov (United States)

    Echevarria, Michael L; Wolfe, Gordon V; Strom, Suzanne L; Taylor, Alison R

    2014-10-01

    Planktonic alveolates (ciliates and dinoflagellates), key trophic links in marine planktonic communities, exhibit complex behaviors that are underappreciated by microbiologists and ecologists. Furthermore, the physiological mechanisms underlying these behaviors are still poorly understood except in a few freshwater model ciliates, which are significantly different in cell structure and behavior than marine planktonic species. Here, we argue for an interdisciplinary research approach to connect physiological mechanisms with population-level outcomes of behaviors. Presenting the tintinnid ciliate Favella as a model alveolate, we review its population ecology, behavior, and cellular/molecular biology in the context of sensory biology and synthesize past research and current findings to construct a conceptual model describing the sensory biology of Favella. We discuss how emerging genomic information and new technical methods for integrating research across different levels of biological organization are paving the way for rapid advance. These research approaches will yield a deeper understanding of the role that planktonic alveolates may play in biogeochemical cycles, and how they may respond to future ocean conditions.

  15. Ecological functions of ciliated protozoa in marine ecosystem: effects of ammonium on the population growth of Euplotes vannus

    Institute of Scientific and Technical Information of China (English)

    Xu Henglong; Song Weibo; Zhu Mingzhuang; Wang Mei; Ma Honggang; Xu Xiaozhong

    2005-01-01

    The effects of ammonium on the population growth of the marine ciliate, Euplotes vannus, were examined using ecotoxicological method. It is showed that ammonium exerts inhibitory effects on the growth of the ciliate populations in a concentration-dependent way. Statistical analysis reveals that the population growth dynamics exposed to ammonium-N concentration over 100mg/L are significantly different from that in the control at P<0.05 level. Linear regression determined that the 24h, 36h, 48h, 60h, 72h and 84h IC50 values of ammonium-N are 19.68, 201.51, 167.49, 47.86, 50.43 and 43.11 concentration over 100mg/L, respectively (P<0.05; pH 8.2; salinity 28 ppt; temperature, 25℃). The results indicate that the tolerance to ammonium in E. vannus is considerably higher than that of the larvae or juveniles of some metozoa, such as cultured prawns and oysters. Therefore, it is believed that the high tolerance to ammonium is necessary for ciliated protozoa to play positive roles in maintaining and improving water quality in marine ecosystems, especially in the intensive aquaculture waters with high-level ammonium. In addition, the correlation between IC50 values and exposure time was discussed.

  16. Acute toxicities of potassium permanganate, formalin, and Lugol's iodine solution to a marine ciliate, Pleuronema coronatum (ciliophora, scuticociliatida)

    Science.gov (United States)

    Yantao, Qiu; Weibo, Song

    2002-10-01

    Acute toxicities of potassium permanganate, formalin, and Lugol’s iodine solution to a commonly occurred marine ciliate Pleuronema coronatum (Ciliophora, Scuticociliatida) were measured. Linear regression analysis of the results highlighted the close relationships between doses of the medicines and mortalities of the organisms, thus providing a capability to predict toxicity effects from the dose. Toxic effects of the medicines on the ciliates were described in the present paper, and the median lethal concentrations (LC50 values) were given. Results of measurements indicated that 2 h-LC50 and 12 h-LC50 values of formalin on P. coronatum were 59.00×10-6 and 43.57×10-6, while those of Lugol’s solutions were 90.13 and 67.84×10-6 respectively. The tolerance of P. coronatum to formalin is apparently lower than that to Lugol’s iodine solution and potassium permanganate is a suitable medicine to kill ciliates in short time.

  17. Acute Toxicities of Potassium Permanganate, Formalin, and Lugol's Iodine Solution to a Marine Ciliate,Pleuronema coronatum ( Ciliophora, Scuticociliatida)

    Institute of Scientific and Technical Information of China (English)

    QIU Yantao; SONG Weibo

    2002-01-01

    Acute toxicities of potassium permanganate, formalin, and Lugol's iodine solution to a commonly occurred ma-rine ciliate Pleuronema coronatum (Ciliophora, Scuticociliatida) were measured. Linear regression analysis of the resultshighlighted the close relationships between doses of the medicines and mortalities of the organisms, thus providing a capabili-ty to predict toxicity effects from the dose. Toxic effects of the medicines on the ciliates were described in the present paper,and the median lethal concentrations (LC50 values) were given. Results of measurements indicated that 2 h-LC50 and 12 h-LC50 values of formalin on P. coronatum were 59.00 × 10-6 and 43.57 × 10 6, while those of Lugol's solutions were 90.13 and67.84 × 10 6 respectively. The tolerance of P. coronatum to formalin is apparently lower than that to Lugol' s iodine solutionand potassium permanganate is a suitable medicine to kill ciliates in short time.

  18. Macronuclear genome sequence of the ciliate Tetrahymena thermophila, a model eukaryote.

    Directory of Open Access Journals (Sweden)

    Jonathan A Eisen

    2006-09-01

    Full Text Available The ciliate Tetrahymena thermophila is a model organism for molecular and cellular biology. Like other ciliates, this species has separate germline and soma functions that are embodied by distinct nuclei within a single cell. The germline-like micronucleus (MIC has its genome held in reserve for sexual reproduction. The soma-like macronucleus (MAC, which possesses a genome processed from that of the MIC, is the center of gene expression and does not directly contribute DNA to sexual progeny. We report here the shotgun sequencing, assembly, and analysis of the MAC genome of T. thermophila, which is approximately 104 Mb in length and composed of approximately 225 chromosomes. Overall, the gene set is robust, with more than 27,000 predicted protein-coding genes, 15,000 of which have strong matches to genes in other organisms. The functional diversity encoded by these genes is substantial and reflects the complexity of processes required for a free-living, predatory, single-celled organism. This is highlighted by the abundance of lineage-specific duplications of genes with predicted roles in sensing and responding to environmental conditions (e.g., kinases, using diverse resources (e.g., proteases and transporters, and generating structural complexity (e.g., kinesins and dyneins. In contrast to the other lineages of alveolates (apicomplexans and dinoflagellates, no compelling evidence could be found for plastid-derived genes in the genome. UGA, the only T. thermophila stop codon, is used in some genes to encode selenocysteine, thus making this organism the first known with the potential to translate all 64 codons in nuclear genes into amino acids. We present genomic evidence supporting the hypothesis that the excision of DNA from the MIC to generate the MAC specifically targets foreign DNA as a form of genome self-defense. The combination of the genome sequence, the functional diversity encoded therein, and the presence of some pathways missing from

  19. Status and understanding of groundwater quality in the Santa Clara River Valley, 2007-California GAMA Priority Basin Project

    Science.gov (United States)

    Burton, Carmen A.; Montrella, Joseph; Landon, Matthew K.; Belitz, Kenneth

    2011-01-01

    Groundwater quality in the approximately 460-square-mile Santa Clara River Valley study unit was investigated from April through June 2007 as part of the Priority Basin Project of the Groundwater Ambient Monitoring and Assessment (GAMA) Program. The GAMA Priority Basin Project is conducted by the U.S. Geological Survey (USGS) in collaboration with the California State Water Resources Control Board and the Lawrence Livermore National Laboratory. The Santa Clara River Valley study unit contains eight groundwater basins located in Ventura and Los Angeles Counties and is within the Transverse and Selected Peninsular Ranges hydrogeologic province. The Santa Clara River Valley study unit was designed to provide a spatially unbiased assessment of the quality of untreated (raw) groundwater in the primary aquifer system. The assessment is based on water-quality and ancillary data collected in 2007 by the USGS from 42 wells on a spatially distributed grid, and on water-quality data from the California Department of Public Health (CDPH) database. The primary aquifer system was defined as that part of the aquifer system corresponding to the perforation intervals of wells listed in the CDPH database for the Santa Clara River Valley study unit. The quality of groundwater in the primary aquifer system may differ from that in shallow or deep water-bearing zones; for example, shallow groundwater may be more vulnerable to surficial contamination. Eleven additional wells were sampled by the USGS to improve understanding of factors affecting water quality.The status assessment of the quality of the groundwater used data from samples analyzed for anthropogenic constituents, such as volatile organic compounds (VOCs) and pesticides, as well as naturally occurring inorganic constituents, such as major ions and trace elements. The status assessment is intended to characterize the quality of untreated groundwater resources in the primary aquifers of the Santa Clara River Valley study unit

  20. The trophic role and impact of plankton ciliates in the microbial web structure of a tropical polymictic lake dominated by filamentous cyanobacteria

    Directory of Open Access Journals (Sweden)

    Alfonso Esquivel

    2016-03-01

    Full Text Available The recent interest in the plankton structures and dynamics in tropical and subtropical lakes has revealed important trends that set these lakes apart from temperate lakes, and one of the main differences is the enhanced importance of the microbial food web with respect to net plankton. Ciliates are a key component of subtropical and tropical microbial webs because of their role as dominant picoplankton grazers and their ability to channel picoplankton production to the uppermost trophic levels. Plankton ciliates have been found to play a crucial role in the survival of fish larvae in lakes that share several features with Lake Catemaco, a eutrophic tropical Mexican lake. Therefore, the plankton ciliate composition, abundance, and biomass of Lake Catemaco were studied to assess their role in the microbial food web. The data were obtained from surface and bottom water samples collected at eleven points during three surveys in 2011 and an additional survey in 2013, with the surveys covering the local climatic seasons. The most abundant components of the plankton ciliate assemblages were small prostomatids (Urotricha spp., choreotrichs (Rimostrombidium spp., cyclotrichs (Mesodinium and Askenasia, and scuticociliates (Cyclidium, Cinetochilum, Pleuronema, and Uronema. Other important ciliates in terms of abundance and/or biomass were haptorids (Actinobolina, Belonophrya, Monodinium, Paradileptus, and Laginophrya, Halteria, oligotrichs (Limnostrombidium and Pelagostrombidium, Linostomella, Bursaridium, Cyrtolophosis, and Litonotus. The ciliate abundance averaged 57 cells mL-1 and ranged from 14 to 113 cells mL-1. The mean ciliate biomass was 71 µg C L-1 and ranged from 10 to 202 µg C L-1. Differences were not detected in ciliate abundance or biomass between the sampling points or sampling depths (surface to bottom; however, significant differences were observed between seasons for both variables. Nano-sized filamentous cyanobacteria were the most

  1. EVALUACION DEL RIEGO CON AGUA CLARA DE RELAVE ALTA EN MOLIBDENO Y SULFATOS SOBRE LA CALIDAD DEL SUELO Y DEL FORRAJE

    OpenAIRE

    ZBINDEN VELIZ, ANNELIE MARLEN

    2011-01-01

    La utilización continua en riego agrícola, de agua clara de relaves mineros generados por flotación alcalina de sulfuros de cobre, puede afectar la calidad del suelo, los productos agrícolas y la malla trófica, debido a que contiene altas concentraciones de molibdeno y sulfatos. El objetivo de ésta investigación fue evaluar el efecto del riego con agua clara de relave, alta en molibdeno y sulfatos, sobre la calidad química y biológica del suelo y sobre la calidad del forraje de ballica ...

  2. [Anatomical Vitamin C-Research during National Socialism and the Post-war Period: Max Clara's Human Experiments at the Munich Anatomical Institute].

    Science.gov (United States)

    Schûtz, Mathias; Schochow, Maximilian; Waschke, Jens; Marckmann, Georg; Steger, Florian

    2014-01-01

    In autumn of 1942, Max Clara (1899-1966) became chairman of the anatomical institute Munich. There, he intensified his research concerning the proof of vitamin C with the bodies of executed prisoners which were delivered by the Munich-Stadelheim prison. This research on human organs was pursued by applying ascorbic acid (Cebion) to prisoners before their execution. The paper investigates this intensified and radicalized anatomical research through human experiments, which Max Clara conducted in Munich and published from Istanbul during the postwar years, as well as its scientific references from the Nazi period.

  3. Geometric control of ciliated band regulatory states in the sea urchin embryo.

    Science.gov (United States)

    Barsi, Julius C; Li, Enhu; Davidson, Eric H

    2015-03-01

    The trapezoidal ciliated band (CB) of the postgastrular sea urchin embryo surrounds the oral ectoderm, separating it from adjacent embryonic territories. Once differentiated, the CB is composed of densely arranged cells bearing long cilia that endow the larva with locomotion and feeding capability. The spatial pattern from which the CB will arise is first evidenced during pregastrular stages by expression of the pioneer gene onecut. Immediately after gastrulation, the CB consists of four separate regulatory state domains, each of which expresses a unique set of transcription factors: (1) the oral apical CB, located within the apical neurogenic field; (2) the animal lateral CB, which bilaterally separates the oral from aboral ectoderm; (3) the vegetal lateral CB, which bilaterally serves as signaling centers; and (4) the vegetal oral CB, which delineates the boundary with the underlying endoderm. Remarkably, almost all of the regulatory genes specifically expressed within these domains are downregulated by interference with SoxB1 expression, implying their common activation by this factor. Here, we show how the boundaries of the CB subdomains are established, and thus ascertain the design principle by which the geometry of this unique and complex regulatory state pattern is genomically controlled. Each of these boundaries, on either side of the CB, is defined by spatially confined transcriptional repressors, the products of regulatory genes operating across the border of each subdomain. In total this requires deployment of about ten different repressors, which we identify in this work, thus exemplifying the complexity of information required for spatial regulatory organization during embryogenesis.

  4. Genesis of amorphous calcium carbonate containing alveolar plates in the ciliate Coleps hirtus (Ciliophora, Prostomatea).

    Science.gov (United States)

    Lemloh, Marie-Louise; Marin, Frédéric; Herbst, Frédéric; Plasseraud, Laurent; Schweikert, Michael; Baier, Johannes; Bill, Joachim; Brümmer, Franz

    2013-02-01

    In the protist world, the ciliate Coleps hirtus (phylum Ciliophora, class Prostomatea) synthesizes a peculiar biomineralized test made of alveolar plates, structures located within alveolar vesicles at the cell cortex. Alveolar plates are arranged by overlapping like an armor and they are thought to protect and/or stiffen the cell. Although their morphology is species-specific and of complex architecture, so far almost nothing is known about their genesis, their structure and their elemental and mineral composition. We investigated the genesis of new alveolar plates after cell division and examined cells and isolated alveolar plates by electron microscopy, energy-dispersive X-ray spectroscopy, FTIR and X-ray diffraction. Our investigations revealed an organic mesh-like structure that guides the formation of new alveolar plates like a template and the role of vesicles transporting inorganic material. We further demonstrated that the inorganic part of the alveolar plates is composed out of amorphous calcium carbonate. For stabilization of the amorphous phase, the alveolar vesicles, the organic fraction and the element phosphorus may play a role.

  5. Electrochemical study of the interaction between Eu{sup 3+} and ciliate Euplotes octocarinatus centrin

    Energy Technology Data Exchange (ETDEWEB)

    Zhou Baojuan; Wang Ziwei [Institute of Molecular Science, Key Laboratory of Chemical Biology and Molecular Engineering of Ministry of Education, Shanxi University, Taiyuan 030006 (China); Tian Yanni, E-mail: tianyann@sxu.edu.c [Institute of Molecular Science, Key Laboratory of Chemical Biology and Molecular Engineering of Ministry of Education, Shanxi University, Taiyuan 030006 (China); Wang Zhijun [Institute of Molecular Science, Key Laboratory of Chemical Biology and Molecular Engineering of Ministry of Education, Shanxi University, Taiyuan 030006 (China); Yang Binsheng, E-mail: yangbs@sxu.edu.c [Institute of Molecular Science, Key Laboratory of Chemical Biology and Molecular Engineering of Ministry of Education, Shanxi University, Taiyuan 030006 (China)

    2010-05-01

    A new species was formed when protein P{sub 23} (one segment of ciliate Euplotes octocarinatus centrin) was added to a solution of Eu{sup 3+}. The interaction between P{sub 23} and Eu{sup 3+} was investigated by cyclic voltammetry, pulse voltammetry and electrochemical impedance spectroscopy in 10 mM N-2-hydroxyethylpiperazine-N-2-ethanesulfonic acid (HEPES) buffer (pH 7.4) using a pyrolytic graphite electrode. The formal potential (E{sup o}') of Eu{sup 3+} shifted from -0.61 to -0.84 V (versus saturated calomel electrode) after P{sub 23} was added to the Eu{sup 3+} solution. The diffusion coefficient (D), the charge-transfer coefficient (alpha) and the electron transfer standard rate constant (k{sub s}) were obtained in the absence and the presence of P{sub 23}. The affinity constant of Eu{sup 3+} and P{sub 23} was determined to be (1.89 +- 0.51) x 10{sup 4} M{sup -1}. The electrochemical investigation of europium bound to the protein provided useful data for the studies of calcium-binding proteins.

  6. Calcium in ciliated protozoa: sources, regulation, and calcium-regulated cell functions.

    Science.gov (United States)

    Plattner, H; Klauke, N

    2001-01-01

    In ciliates, a variety of processes are regulated by Ca2+, e.g., exocytosis, endocytosis, ciliary beat, cell contraction, and nuclear migration. Differential microdomain regulation may occur by activation of specific channels in different cell regions (e.g., voltage-dependent Ca2+ channels in cilia), by local, nonpropagated activation of subplasmalemmal Ca stores (alveolar sacs), by different sensitivity thresholds, and eventually by interplay with additional second messengers (cilia). During stimulus-secretion coupling, Ca2+ as the only known second messenger operates at approximately 5 microM, whereby mobilization from alveolar sacs is superimposed by "store-operated Ca2+ influx" (SOC), to drive exocytotic and endocytotic membrane fusion. (Content discharge requires binding of extracellular Ca2+ to some secretory proteins.) Ca2+ homeostasis is reestablished by binding to cytosolic Ca2+-binding proteins (e.g., calmodulin), by sequestration into mitochondria (perhaps by Ca2+ uniporter) and into endoplasmic reticulum and alveolar sacs (with a SERCA-type pump), and by extrusion via a plasmalemmal Ca2+ pump and a Na+/Ca2+ exchanger. Comparison of free vs total concentration, [Ca2+] vs [Ca], during activation, using time-resolved fluorochrome analysis and X-ray microanalysis, respectively, reveals that altogether activation requires a calcium flux that is orders of magnitude larger than that expected from the [Ca2+] actually required for local activation.

  7. Biochemical and immunological characterization of the microfibrillar ecto-endoplasmic boundary in the ciliate Isotricha prostoma.

    Science.gov (United States)

    Vigues, B; Metenier, G; Groliere, C A

    1984-01-01

    The cytoplasm of the ciliated protozoan Isotricha prostoma is compartmented by a continuous fibrillar system made up of a double layer of 4 nm-diameter filaments: the microfibrillar ecto-endoplasmic boundary (EEB). Isolation of this structure after treatment of the cells in a buffer of low ionic strength in the presence of the detergent Triton X-100 evidenced connections linking the two filamentous layers. One dimensional electrophoresis on SDS-polyacrylamide gel of EEB fractions revealed several major proteins with apparent molecular weights between 11 and 23 K. Of these, two neighboring bands of MW22 and 23 K were removed from gels and used as antigens to obtain rabbit antibodies. The antiserum obtained reacted specifically with injected proteins as shown by the technique of immunological detection on nitrocellulose sheets using the peroxidase reaction product. Electron microscopy localization of the antigens with anti-IgG coupled with colloidal gold showed significant labeling of the EEB within the cortex of Isotricha permeabilized with Triton X-100. We hope that the 22-23 K antiserum will prove to be a useful tool for the comparative study of other non-actin filament systems in Protozoa.

  8. Purification and partial characterization of glyceraldehyde-3-phosphate dehydrogenase from the ciliate Tetrahymena thermophila

    Institute of Scientific and Technical Information of China (English)

    Nadia Errafiy; Abdelaziz Soukri

    2012-01-01

    In the present study,we purified the glycolytic enzymeglyceraldehyde-3-phosphate dehydrogenase (GAPDH)which is involved in cellular energy production and has important housekeeping functions,from the ciliate Tetrahymena thermophila using a three-step procedure.The enzyme was purified ~68 folds by ammonium sulfate precipitation,followed by two steps of column chromatography (DEAE-cellulose and Mono-S).The purified enzyme is a homotetramer with a molecular weight of ~120 kDa.Isoelectric focusing analysis showed the presence of only one basic GAPDH isoform with an isoelectric point of 8.8.Western blot analysis showed a single 32-kDa band corresponding to the enzyme subunit using a monospecific polyclonal antibody against the T.thermophila GAPDH.The maximum of enzyme activity occurred at pH 8.0 and at 30-35℃.The apparent Km values for both NAD+ and D-glyceraldehyde-3-phosphate were 0.102±0.012 and 0.360 + 0.018 mM,respectively.The maximal velocity (Vmax) was 39.40 + 2.95 U/mg.The T.thermophila GAPDH is inhibited by oxidative and nitrosative stress reagents.

  9. Molecular Phylogeny of Mobilid and Sessilid Ciliates Symbiotic in Eastern Pacific Limpets (Mollusca: Patellogastropoda).

    Science.gov (United States)

    Irwin, Nicholas A T; Lynn, Denis H

    2015-01-01

    The phylogenetic relationships of the ciliate subclass Peritrichia, composed of the orders Mobilida and Sessilida, have recently come under debate as morphological and molecular analyses have struck contrasting conclusions as to the monophyly of the group. We provide additional molecular data to assess the monophyly of the Peritrichia by sequencing the small subunit ribosomal RNA genes of two symbiotic peritrichs, Urceolaria korschelti and Scyphidia ubiquita, found inhabiting the mantle cavity of limpets. Although phylogenetic analyses indicated a nonmonophyletic Peritrichia, approximately unbiased tests revealed that the monophyletic hypothesis could not be rejected. With regard to the Mobilida, our analysis showed divergence within the family Trichodinidae related to host taxa-a molluscan clade and a fish clade. For the Sessilida, the family Scyphidiidae was sister to the Astylozoidae. In our sampling of U. korschelti and S. ubiquita, both species showed significant genetic divergence among geographically isolated, yet morphologically indistinguishable populations. We hypothesize that cryptic speciation has produced these morphologically identical species and argue that more extensive genomic analyses are required to fully assess the monophyly, biogeography, and ultimately biodiversity of the peritrichs.

  10. Adaptation responses of individuals to environmental changes in the ciliate Euplotes crassus

    Science.gov (United States)

    Kim, Se-Joo; Kim, Jin-Hyoung; Ju, Se-Jong

    2017-03-01

    Although the response unit of living organisms to environmental changes is at the individual level, most experiments on the adaptation responses of ciliates have been conducted in batches, comprising multiple-individuals, due to their microscopic size. However, here, we confirmed that individuals undergo different division cycles in monocultures of Euplotes crassus. They also exhibited transcript variations of 4.63-fold in SSU and of 22.78- fold in Hsp70. Additionally, in salt-stressed E. crassus individuals, SSU transcripts of individuals varied by 6.92-fold at 27 psu, 8.69- fold at 32 psu, and 2.51-fold at 37 psu. However, the maximum difference in Hsp70 was only 4.23-fold under all conditions. These results suggest there may be different biological rhythms even in siblings derived from the same parent. It can also be inferred that various environmental factors have different effects on different E. crassus individuals. Therefore, to elucidate relationships between organism adaptations and environmental changes, studies at the individual level should be conducted with multi-individual approaches.

  11. Distribution of a centrosomal antigen during morphogenesis in the ciliated protozoan Euplotes.

    Science.gov (United States)

    Fleury, A; Lemullois, M; Coffe, G

    1998-07-01

    Ciliates assemble basal bodies in great number at many stages of the life-cycle. In order to understand their assembly mechanisms, we screened a library of monoclonal antibodies directed against pericentriolar material. One of these antibodies, CTR210, was used previously to follow steps of this assembly process: in Paraurostyla, new basal bodies appear along a scaffold of linear structures recognized by this antibody. The very unusual behavior of this antigen deserved confirmation in other species. In the present study, we show by immunofluorescence that, in another phylogenetically very distant species, Euplotes, basal bodies are assembled in the same pathway during division. In addition, this antibody recognizes a filamentous ring located at the division furrow and linking many basal body assemblages. By cell fractionation and cytoskeletal extraction, we obtained fractions enriched in basal bodies and associated material. Such fractions still display a high complexity in protein composition. These fractions were used to characterize the main target of the antibody as a doublet of 45 kDa. These results confirm previous results in terms of functionality of the protein recognized by the antibody, but raise new questions in terms of the assignment of the recognized protein to the HSP70 family as hypothesized previously.

  12. Studies on the in vitro cultivation of ciliate protozoa from the kangaroo forestomach.

    Science.gov (United States)

    Dehority, Burk A; Wright, André-Denis G

    2014-08-01

    The methods used for culturing rumen protozoa were found to be unsatisfactory for growth of ciliate protozoa from the kangaroo forestomach. Based on published measurements of physical parameters in the marsupial forestomach, several modifications were incorporated into the procedure, i.e., an increase in % hydrogen in the gas phase, adjustment of initial pH of the medium to 6.9-7.0 range, feed only forage as a substrate and incubate at a lower temperature (33-36 °C). Only incubation at the lower temperature increased survival time of the kangaroo protozoa. Two species of Bitricha were still viable after 28 d in culture. Cultures had to be terminated at that time. One of the species differed considerably in size and shape from previously described species and based on 18S rRNA data, may represent a new species of Bitricha. The second species, present in low numbers was identified as Bitricha oblata. In a separate trial, Macropodinium yalanbense survived for 11 d, at which time these cultures also had to be terminated.

  13. Trichodina modesta: an exotic ciliate in the Neotropical region parasitizing an unusual host

    Directory of Open Access Journals (Sweden)

    Gustavo Moraes Ramos Valladão

    Full Text Available In this study, an important ornamental fish, Betta splendens (Osphronemidae, from three different Brazilian states was examined for parasitic infestations. Smears with parasites were impregnated with silver nitrate or stained using Giemsa for taxonomic evaluation. A disc-shaped trichodinid with a body diameter of 39.7 ± 3.3 µm, adhesive disc diameter of 32.9 ± 3.1 µm and denticulate ring diameter of 19.5 ± 2.0 µm was found. The morphological characteristics resembled those of Trichodina modesta Lom, 1970, a species that shows clear host specificity for Cypriniformes. Until now, its occurrence was restricted to the Eurasian region. In the present study, a new host for T. modesta is reported and therefore the first occurrence of this species in the Americas. The parasite was possibly introduced into the Neotropical region through the exotic fish trade, especially of Cypriniformes used by aquarists. The distribution of this ciliate is discussed and a checklist of localities and hosts for the species is provided.

  14. Space station image captures a red tide ciliate bloom at high spectral and spatial resolution.

    Science.gov (United States)

    Dierssen, Heidi; McManus, George B; Chlus, Adam; Qiu, Dajun; Gao, Bo-Cai; Lin, Senjie

    2015-12-01

    Mesodinium rubrum is a globally distributed nontoxic ciliate that is known to produce intense red-colored blooms using enslaved chloroplasts from its algal prey. Although frequent enough to have been observed by Darwin, blooms of M. rubrum are notoriously difficult to quantify because M. rubrum can aggregate into massive clouds of rusty-red water in a very short time due to its high growth rates and rapid swimming behavior and can disaggregate just as quickly by vertical or horizontal dispersion. A September 2012 hyperspectral image from the Hyperspectral Imager for the Coastal Ocean sensor aboard the International Space Station captured a dense red tide of M. rubrum (10(6) cells per liter) in surface waters of western Long Island Sound. Genetic data confirmed the identity of the chloroplast as a cryptophyte that was actively photosynthesizing. Microscopy indicated extremely high abundance of its yellow fluorescing signature pigment phycoerythrin. Spectral absorption and fluorescence features were related to ancillary photosynthetic pigments unique to this organism that cannot be observed with traditional satellites. Cell abundance was estimated at a resolution of 100 m using an algorithm based on the distinctive yellow fluorescence of phycoerythrin. Future development of hyperspectral satellites will allow for better enumeration of bloom-forming coastal plankton, the associated physical mechanisms, and contributions to marine productivity.

  15. Inter-annual ciliate distribution variation within the late stratification oxycline in a monomictic lake, Lake Alchichica (Mexico

    Directory of Open Access Journals (Sweden)

    Ximena Sánchez Medina

    2016-03-01

    Full Text Available noxia, and ciliates might play a very important role in the plankton community budget there. We analysed changes in the composition and biomass of the ciliate assemblage and other microbial loop components throughout the oxycline just at the end of stratification in a warm-monomictic lake, Lake Alchichica, Mexico (four samplings: 2006-2008, 2010; the results were compared with those obtained from another lake from the region, La Preciosa, sampled in 2010. Bacteria, autotrophic picoplankton (APP and flagellates were analysed using epifluorescence microscopy. Ciliates were evaluated either in DAPI stained samples (looking for pigmented organelles and/or ingested phototrophs or in quantitative protargol stain (QPS permanent preparations, where they were identified at the genus or species level. The end of the stratification period in Lake Alchichica was characterized by almost uniform heterotrophic picoplankton (HPP numbers (106 cells mL-1 throughout the water column. Meanwhile, APP showed epilimnetic and/or metalimnetic maxima of 105 cells mL-1 followed by an order of magnitude drop in the hypolimnion. A very important peak (105 cells mL-1 of the autotrophic or mixotrophic flagellate Pyramimonas sp. was observed repeatedly above and within the oxycline of Lake Alchichica. Ciliate biomass maxima were found around the oxycline and in the above-bottom layer. The top of the oxycline was dominated by Euplotes spp. and Spirostomum teres fine- to coarse-filter feeders (feeding upon APP, nanodiatoms and algae. Raptorial haptorids (in particular, Phialina sp. were the second most important group, generally occupying the layer below euplotids, followed by Holophrya and Prorodon facultative anaerobic prostomes. Sometimes, strictly anaerobic Caenomorpha sp. was found to be important in the anoxic hypolimnion. Minute picoplankton feeding species (both APP and heterotrophic bacteria feeders were important throughout the water column: in the epilimnion

  16. Distribution and Abundance of Interstitial Ciliates in Southampton Water in Relation to Physicochemical Conditions, Metal Pollution and the Availability of Food Organisms

    Science.gov (United States)

    Al-Rasheid, K. A. S.; Sleigh, M. A.

    1995-07-01

    Sediment samples were collected at low tide from eight sandy and muddy shores around Southampton Water on one occasion in July and one occasion in September. The temperature and pH of the sediments were measured at the time of collection, the water content of the sediments was determined and samples subjected to granulometric analysis. The population densities of bacteria and microflagellates were determined and the ciliates in sub-samples were identified to genus level and enumerated. The concentrations of cadmium, copper, lead, mercury and nickel in the interstitial water and in the dried sediments were measured by the dithizone and atomic absorption methods, respectively. These metal concentrations were compared with literature values for other British estuaries. Ciliates belonging to 23 genera were found in the sediments, the diversity of ciliates varying widely between stations. Bacterial numbers (mean ˜5×10 8 cm -3) at the various stations correlate with the surface area of the sediment particles and also correlate weakly with flagellate numbers (mean ˜2×10 4 cm -3). Total ciliate numbers (mean ˜1×10 3 cm -3) correlated quite strongly with flagellate numbers, but not with bacterial numbers. Euplotes, Strombidiumand Uronemawere common at all stations and generally dominated; Didinium, Mesodinium pulexand Pleuronemawere also found at all stations, and the latter two were often numerous; Uronychiawas found at seven stations. The distributions of Acinetopsis, Blepharisma, Lacrymaria, M. pulex, Paramecium, Spirostomum, Strombidiumand Vorticellashowed similar correlations to one another, and tended to favour sites nearer to sources of freshwater; these ciliates also showed a correlation with pH, river waters locally being alkaline. None of the ciliates showed correlations with any physical characteristics of the sediments. There were no negative correlations of ciliate distributions with metal pollutants. The levels of metal pollutants found in water drained

  17. On the 25th Aniversary of the Cardiology Center "Ernesto Che Guevara" in Villa Clara, Cuba A propósito del 25 aniversario del Cardiocentro “Ernesto Che Guevara” de Villa Clara, Cuba

    Directory of Open Access Journals (Sweden)

    Roberto Bermúdez Yera

    2011-07-01

    Full Text Available .El  Cardiocentro “Ernesto Che Guevara” de Santa Clara está próximo a celebrar el 25 aniversario de fundado. En esta institución, que ha recibido varios reconocimientos, se realizan casi todos los procedimientos relacionados con la cirugía cardiovascular, la cardiología intervencionista y la electrofisiología. Específicamente en la  cirugía cardiovascular se han ejecutado hasta la fecha aproximadamente 7 000 intervenciones con una media de supervivencia quirúrgica del 95 %, mientras que en la cardiología intervencionista se realizan anualmente más de 1 500 estudios y entre 400 y 500 intervencionismos. Este sencillo artículo tiene la intensión de exponer algunos de los más importantes resultados de esta institución en el cuarto de siglo de existencia.

  18. Deformation from the 1989 Loma Prieta earthquake near the southwest margin of the Santa Clara Valley, California

    Science.gov (United States)

    Schmidt, Kevin M.; Ellen, Stephen D.; Peterson, David M.

    2014-01-01

    Damage to pavement and near-surface utility pipes, caused by the 17 October 1989, Loma Prieta earthquake, provides evidence for ground deformation in a 663 km2 area near the southwest margin of the Santa Clara Valley, California (USA). A total of 1427 damage sites, collected from more than 30 sources, are concentrated in four zones, three of which lie near previously mapped faults. In one of these zones, the channel lining of Los Gatos Creek, a 2-km-long concrete strip trending perpendicular to regional geologic structure, was broken by thrusts that were concentrated in two belts, each several tens of meters wide, separated by more than 300 m of relatively undeformed concrete.

  19. Demographic factors associated with perceptions about water safety and tap water consumption among adults in Santa Clara County, California, 2011.

    Science.gov (United States)

    van Erp, Brianna; Webber, Whitney L; Stoddard, Pamela; Shah, Roshni; Martin, Lori; Broderick, Bonnie; Induni, Marta

    2014-06-12

    The objective of this study was to examine differences in tap water consumption and perceptions of bottle versus tap water safety for Hispanics and non-Hispanic whites, as well as associations with other demographic characteristics. Data are from the Santa Clara County, California, Dietary Practices Survey (2011; N = 306). We used logistic regression to examine associations between demographic characteristics and 1) perceptions that bottled water is safer than tap and 2) primarily consuming tap water. Hispanics were less likely than non-Hispanic whites to primarily drink tap water (OR = 0.33; 95% CI, 0.11-0.99), although there was no significant difference in perceptions that bottled water is safer between these groups (OR = 0.50; 95% CI, 0.11-2.27). Hispanics may be an important population for interventions promoting tap water consumption.

  20. A comparison of three tests to detect general clustering of a rare disease in Santa Clara County, California.

    Science.gov (United States)

    Hill, E G; Ding, L; Waller, L A

    2000-05-30

    Statistical tests to detect clustering of a rare disease investigate whether an observed spatial pattern of cases appears to be due to chance alone. Heterogeneous population density and the geographic structure of the data under consideration complicate the ability to make comparisons of different tests. Further, interpretation of test results depends on the nature of the test used and what feature of the data it is designed to detect. With these issues in mind, we compare three recent tests for assessing general clustering among cases where the population is distributed heterogeneously across the study area, namely those of Besag and Newell, Turnbull et al. and Tango. We compare these methods using 1981 incidence data for severe cardiac birth defects from Santa Clara County, California.

  1. A propósito del 25 aniversario del Cardiocentro “Ernesto Che Guevara” de Villa Clara, Cuba

    Directory of Open Access Journals (Sweden)

    Roberto Bermúdez Yera

    2011-07-01

    Full Text Available El  Cardiocentro “Ernesto Che Guevara” de Santa Clara está próximo a celebrar el 25 aniversario de fundado. En esta institución, que ha recibido varios reconocimientos, se realizan casi todos los procedimientos relacionados con la cirugía cardiovascular, la cardiología intervencionista y la electrofisiología. Específicamente en la  cirugía cardiovascular se han ejecutado hasta la fecha aproximadamente 7 000 intervenciones con una media de supervivencia quirúrgica del 95 %, mientras que en la cardiología intervencionista se realizan anualmente más de 1 500 estudios y entre 400 y 500 intervencionismos. Este sencillo artículo tiene la intensión de exponer algunos de los más importantes resultados de esta institución en el cuarto de siglo de existencia.

  2. Immunocytochemical localization of the surfactant apoprotein and Clara cell antigen in chemically induced and naturally occurring pulmonary neoplasms of mice.

    Science.gov (United States)

    Ward, J. M.; Singh, G.; Katyal, S. L.; Anderson, L. M.; Kovatch, R. M.

    1985-01-01

    The localization of surfactant apoprotein (SAP) and the Clara cell antigen(s) (CCA) was studied in naturally occurring and experimentally induced pulmonary hyperplasias and neoplasms by avidin-biotin peroxidase complex (ABC) immunocytochemistry. Lungs of B6C3F1 and A strain mice with naturally occurring lesions, B6C3F1 mice given injections of N-nitrosodiethylamine (DEN), BALB/c nu/nu or nu/+ mice exposed transplacentally on Day 16 of gestation to ethylnitrosourea (ENU), or BALB/c nu/+ mice exposed to ENU at 8-12 weeks of age were preserved in formalin or Bouin's fixative. After ABC immunocytochemistry, SAP was found in the cytoplasm of normal alveolar Type II cells; in the majority of cells in focal alveolar and solid hyperplasias originating in peribronchiolar or peripheral locations; and in solid, tubular, papillary, and mixed adenomas and carcinomas. The larger mixed-pattern neoplasms and small or large tubular neoplasms usually had the least number of cells with SAP. The majority of large papillary adenomas and carcinomas in BALB/c mice exposed to ENU and in untreated A strain mice contained SAP in the nuclei of many neoplastic cells but only in the cytoplasm of a few neoplastic cells. CCA was found in normal Clara cells of bronchi and bronchioles but not in any hyperplastic or neoplastic lesion of any mouse studied. This study provided immunocytochemical evidence that the vast majority of naturally occurring and experimentally induced pulmonary neoplasms of mice are alveolar Type II cell adenomas and carcinomas. Images Figure 1 Figure 2 Figure 3 Figure 4 Figure 5 Figure 6 Figure 7 Figure 8 PMID:3883798

  3. Statistical analysis and mathematical modeling of a tracer test on the Santa Clara River, Ventura County, California

    Science.gov (United States)

    Paybins, Katherine S.; Nishikawa, Tracy; Izbicki, John A.; Reichard, Eric G.

    1998-01-01

    To better understand flow processes, solute-transport processes, and ground-water/surface-water interactions on the Santa Clara River in Ventura County, California, a 24-hour fluorescent-dye tracer study was performed under steady-state flow conditions on a 28-mile reach of the river. The study reach includes perennial (uppermost and lowermost) subreaches and ephemeral subreaches of the lower Piru Creek and the middle Santa Clara River. Dye was injected at a site on Piru Creek, and fluorescence of river water was measured continuously at four sites and intermittently at two sites. Discharge measurements were also made at the six sites. The time of travel of the dye, peak dye concentration, and time-variance of time-concentration curves were obtained at each site. The long tails of the time-concentration curves are indicative of sources/sinks within the river, such as riffles and pools, or transient bank storage. A statistical analysis of the data indicates that, in general, the transport characteristics follow Fickian theory. These data and previously collected discharge data were used to calibrate a one-dimensional flow model (DAFLOW) and a solute-transport model (BLTM). DAFLOW solves a simplified form of the diffusion-wave equation and uses empirical relations between flow rate and cross-sectional area, and flow rate and channel width. BLTM uses the velocity data from DAFLOW and solves the advection-dispersion transport equation, including first-order decay. The simulations of dye transport indicated that (1) ground-water recharge explains the loss of dye mass in the middle, ephemeral, subreaches, and (2) ground-water recharge does not explain the loss of dye mass in the uppermost and lowermost, perennial, subreaches. This loss of mass was simulated using a linear decay term. The loss of mass in the perennial subreaches may be caused by a combination of photodecay or adsorption/desorption.

  4. Seroprevalencia de babesiosis bovina en la hacienda Vegas de la Clara, Gómez Plata (Antioquia, 2008

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    Richard Zapata Salas

    2011-06-01

    Full Text Available La babesiosis es una enfermedad del ganado bovino transmitida por la garrapata Rhipicephalus (Boophilus microplus y causada por los parásitos protozoarios Babesia bovis y B. bigemina. Una zona se considera epizootiológicamente estable frente a Babesia spp, cuando el 75% de los bovinos entre las edades de 3 a 9 meses son serorreactivos (IgG frente a Babesia bovis y Babesia bigemina y no hay evidencia de signos clínicos. El objetivo de esta investigación fue determinar la seroprevalencia de Babesia bovis y Babesia bigemina en el ganado bovino de la hacienda Vegas de la Clara (Universidad de Antioquia, Gómez Plata, Antioquia, por medio de inmunofluorescencia indirecta. Se diseñó un estudio descriptivo prospectivo con análisis de corte transversal. Fue evaluada toda la población bovina de la hacienda Vegas de la Clara (n = 118. Las muestras fueron evaluadas por inmunofluorescencia indirecta para la detección de anticuerpos tipo IgG específicos contra Babesia bovis y B. bigemina. La serorreactividad obtenida en los bovinos evaluados, para al menos una especie de Babesia fue del 89,8%, para Babesia bovis del 83,8%, mientras que para B. bigemina del 61%. Se obtuvo una relación estadísticamente significativa entre la serorreactividad para B. bigemina y la frecuencia del tratamiento garrapaticida. La serorreactividad indica estabilidad enzoótica en el hato para B. bovis, mientras que para B. bigemina se encontró que la frecuencia del tratamiento garrapaticida interrumpe su ciclo de transmisión.

  5. Ultrastructure of the ciliated cells of the free-swimming larva, and sessile stages, of the marine sponge Haliclona indistincta (Demospongiae: Haplosclerida).

    Science.gov (United States)

    Stephens, Kelly M; Ereskovsky, Alexander; Lalor, Pierce; McCormack, Grace P

    2013-11-01

    We provide a detailed, comparative study of the ciliated cells of the marine haplosclerid sponge Haliclona indistincta, in order to make data available for future phylogenetic comparisons at the ultrastructural level. Our study focuses on the description and analysis of the larval epithelial cells, and choanocytes of the metamorphosed juvenile sponge. The ultrastructure of the two cell types is sufficiently different to prevent our ability to conclusively determine the origin of the choanocytes from the larval ciliated cells. However, ciliated, epithelial cells were observed in a migratory position within the inner cell mass of the larval stages. Some cilia were observed within the cell's cytoplasm, which is indicative of the ciliated epithelial cell undergoing transdifferentiation into a choanocyte; while traces of other ciliated epithelial cells were contained within phagosomes, suggesting they are phagocytosed. We compared our data with other species described in the literature. However, any phylogenetic inference must wait until further detailed comparisons can be made with species whose phylogenetic position has been determined by other means, such as phylogenomics, in order to more closely link genomic, and morphological information.

  6. Characterization of rumen ciliate community composition in domestic sheep, deer, and cattle, feeding on varying diets, by means of PCR-DGGE and clone libraries.

    Science.gov (United States)

    Kittelmann, Sandra; Janssen, Peter H

    2011-03-01

    The structure and variability of ciliate protozoal communities in the rumens of domestic New Zealand ruminants feeding on different diets was investigated. The relative abundance of ciliates compared with bacteria was similar across all samples. However, molecular fingerprinting of communities showed ruminant-specific differences in species composition. Community compositions of cattle were significantly influenced by diet. In contrast, diet effects in deer and sheep were weaker than the animal-to-animal variation. Cloning and sequencing of almost-full-length 18S rRNA genes from representative samples revealed that New Zealand ruminants were colonized by at least nine genera of ciliates and allowed the assignment of samples to two distinct community types. Cattle contained A-type communities, with most sequences closely related to those of the genera Polyplastron and Ostracodinium. Deer and sheep (with one exception) harboured B-type communities, with the majority of sequences belonging to the genera Epidinium and Eudiplodinium. It has been suggested that species composition of ciliate communities may impact methane formation in ruminants, with the B-type producing more methane. Therefore, manipulation of ciliate communities may be a means of mitigating methane emissions from grazing sheep and deer in New Zealand.

  7. Ciliate Nassula sp. grazing on a microcystin-producing cyanobacterium (Planktothrix agardhii): impact on cell growth and in the microcystin fractions

    Energy Technology Data Exchange (ETDEWEB)

    Combes, Audrey; Dellinger, Marc [' Molecules de communication et adaptation des microorganismes' , UMR 7245 CNRS-MNHN, Museum national d' Histoire naturelle, CP 39, 57 rue Cuvier, F-75231 Paris Cedex 05 (France); Cadel-six, Sabrina [' Unite Caracterisation des Toxines' - Laboratoire de securite des aliments de Maisons-Alfort - ANSES, F-94701 Maisons Alfort Cedex (France); Amand, Severine [' Molecules de communication et adaptation des microorganismes' , UMR 7245 CNRS-MNHN, Museum national d' Histoire naturelle, CP 39, 57 rue Cuvier, F-75231 Paris Cedex 05 (France); Comte, Katia, E-mail: kcomte@mnhn.fr [' Molecules de communication et adaptation des microorganismes' , UMR 7245 CNRS-MNHN, Museum national d' Histoire naturelle, CP 39, 57 rue Cuvier, F-75231 Paris Cedex 05 (France)

    2013-01-15

    The proliferation of microcystins (MCs)-producing cyanobacteria (MCs) can have detrimental effects on the food chain in aquatic environments. Until recently, few studies had focused on the fate of MCs in exposed organisms, such as primary consumers of cyanobacteria. In this study, we investigate the impact of an MC-producing strain of the cyanobacterium Planktothrix agardhii on the growth and physiology of a Nassula sp. ciliate isolated from a non-toxic cyanobacterial bloom. We show that this Nassula sp. strain was able to consume and grow while feeding exclusively on an MC-producing cyanobacterium over a prolonged period of time (8 months). In short-term exposure experiments (8 days), ciliates consuming an MC-producing cyanobacterial strain displayed slower growth rate and higher levels of antioxidant enzymes than ciliates feeding on two non-MC-producing strains. Three high-performance methods (LC/MS, LC/MS-MS and ELISA) were used to quantify the free and bound MCs in the culture medium and in the cells. We show that ciliate grazing led to a marked decrease in free MCs (methanol extractable) in cells, the MCs were therefore no longer found in the surrounding culture medium. These findings suggest that MCs may have undergone redistribution (free vs bound MCs) or chemical degradation within the ciliates.

  8. Gene expression in a paleopolyploid: a transcriptome resource for the ciliate Paramecium tetraurelia

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    Kapusta Aurélie

    2010-10-01

    Full Text Available Abstract Background The genome of Paramecium tetraurelia, a unicellular model that belongs to the ciliate phylum, has been shaped by at least 3 successive whole genome duplications (WGD. These dramatic events, which have also been documented in plants, animals and fungi, are resolved over evolutionary time by the loss of one duplicate for the majority of genes. Thanks to a low rate of large scale genome rearrangement in Paramecium, an unprecedented large number of gene duplicates of different ages have been identified, making this organism an outstanding model to investigate the evolutionary consequences of polyploidization. The most recent WGD, with 51% of pre-duplication genes still in 2 copies, provides a snapshot of a phase of rapid gene loss that is not accessible in more ancient polyploids such as yeast. Results We designed a custom oligonucleotide microarray platform for P. tetraurelia genome-wide expression profiling and used the platform to measure gene expression during 1 the sexual cycle of autogamy, 2 growth of new cilia in response to deciliation and 3 biogenesis of secretory granules after massive exocytosis. Genes that are differentially expressed during these time course experiments have expression patterns consistent with a very low rate of subfunctionalization (partition of ancestral functions between duplicated genes in particular since the most recent polyploidization event. Conclusions A public transcriptome resource is now available for Paramecium tetraurelia. The resource has been integrated into the ParameciumDB model organism database, providing searchable access to the data. The microarray platform, freely available through NimbleGen Systems, provides a robust, cost-effective approach for genome-wide expression profiling in P. tetraurelia. The expression data support previous studies showing that at short evolutionary times after a whole genome duplication, gene dosage balance constraints and not functional change are

  9. Generation and analysis of expressed sequence tags from the ciliate protozoan parasite Ichthyophthirius multifiliis

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    Arias Covadonga

    2007-06-01

    Full Text Available Abstract Background The ciliate protozoan Ichthyophthirius multifiliis (Ich is an important parasite of freshwater fish that causes 'white spot disease' leading to significant losses. A genomic resource for large-scale studies of this parasite has been lacking. To study gene expression involved in Ich pathogenesis and virulence, our goal was to generate expressed sequence tags (ESTs for the development of a powerful microarray platform for the analysis of global gene expression in this species. Here, we initiated a project to sequence and analyze over 10,000 ESTs. Results We sequenced 10,368 EST clones using a normalized cDNA library made from pooled samples of the trophont, tomont, and theront life-cycle stages, and generated 9,769 sequences (94.2% success rate. Post-sequencing processing led to 8,432 high quality sequences. Clustering analysis of these ESTs allowed identification of 4,706 unique sequences containing 976 contigs and 3,730 singletons. These unique sequences represent over two million base pairs (~10% of Plasmodium falciparum genome, a phylogenetically related protozoan. BLASTX searches produced 2,518 significant (E-value -5 hits and further Gene Ontology (GO analysis annotated 1,008 of these genes. The ESTs were analyzed comparatively against the genomes of the related protozoa Tetrahymena thermophila and P. falciparum, allowing putative identification of additional genes. All the EST sequences were deposited by dbEST in GenBank (GenBank: EG957858–EG966289. Gene discovery and annotations are presented and discussed. Conclusion This set of ESTs represents a significant proportion of the Ich transcriptome, and provides a material basis for the development of microarrays useful for gene expression studies concerning Ich development, pathogenesis, and virulence.

  10. Evaluate the potential environmental toxicity of quantum dots on ciliated protozoa by microcalorimetry

    Energy Technology Data Exchange (ETDEWEB)

    Xiao, Qi [College of Chemistry and Life Science, Guangxi Teachers Education University, Nanning 530001 (China); State Key Laboratory of Virology, College of Chemistry and Molecular Sciences, Wuhan University, Wuhan 430072 (China); Huang, Shan, E-mail: huangs@whu.edu.cn [College of Chemistry and Life Science, Guangxi Teachers Education University, Nanning 530001 (China); State Key Laboratory of Virology, College of Chemistry and Molecular Sciences, Wuhan University, Wuhan 430072 (China); Su, Wei [College of Chemistry and Life Science, Guangxi Teachers Education University, Nanning 530001 (China); Li, Peiyuan [College of Pharmacy, Guangxi Traditional Chinese Medical University, Nanning 530001 (China); Liang, Zuocui; Ou, Jianzhen; Ma, Jianqiang [College of Chemistry and Life Science, Guangxi Teachers Education University, Nanning 530001 (China); Liu, Yi, E-mail: prof.liuyi@263.net [State Key Laboratory of Virology, College of Chemistry and Molecular Sciences, Wuhan University, Wuhan 430072 (China)

    2012-11-10

    Highlights: Black-Right-Pointing-Pointer The toxic effects of QDs to T. thermophila BF{sub 5} using a TAM air microcalorimeter. Black-Right-Pointing-Pointer QDs were acutely toxic for T. thermophila BF{sub 5} growth in a dose-dependent manner. Black-Right-Pointing-Pointer The toxicity of different ligands-capped QDs on T. thermophila BF{sub 5} was investigated. Black-Right-Pointing-Pointer QDs could be ingested by cells and affect the morphology of T. thermophila BF{sub 5}. - Abstract: In the present study, we evaluated the toxic effects of mercaptoacetic acid (MAA)-capped CdSe QDs and CdSe/ZnS QDs to particle-ingesting model ciliated protozoa Tetrahymena thermophila BF{sub 5} (T. thermophila BF{sub 5}) by using a TAM air isothermal microcalorimeter. These results suggested that both MAA-CdSe QDs and MAA-CdSe/ZnS QDs were indeed acutely toxic for T. thermophila BF{sub 5} growth in a dose-dependent manner, and the toxicities of both MAA-CdSe QDs and MAA-CdSe/ZnS QDs increased dramatically after UV irradiation due to the liberation of more toxic Cd{sup 2+}, which indicated that the toxicity of MAA-CdSe/ZnS QDs was less than that of MAA-CdSe QDs. Furthermore, the toxicity of different ligands-capped CdSe/ZnS QDs on T. thermophila BF{sub 5} was also investigated. The uptake of MAA-CdSe/ZnS QDs and adenosine 5 Prime -monophosphate (AMP)-CdSe/ZnS QDs by cells and the morphological change during the process of T. thermophila BF{sub 5} growth incubated with these QDs were further studied by fluorescence inverted microscopy.

  11. Preliminary insights into the impact of dietary starch on the ciliate, Neobalantidium coli, in captive chimpanzees.

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    Kateřina Schovancová

    Full Text Available Infections caused by the intestinal ciliate Neobalantidium coli are asymptomatic in most hosts. In humans and captive African great apes clinical infections occasionally occur, manifested mainly by dysentery; however, factors responsible for development of clinical balantidiasis have not been fully clarified. We studied the effect of dietary starch on the intensities of infection by N. coli in two groups of captive chimpanzees. Adult chimpanzees infected by N. coli from the Hodonín Zoo and from the Brno Zoo, Czech Republic, were fed with a high starch diet (HSD (average 14.7% of starch for 14 days, followed by a five-day transition period and subsequently with a period of low starch diet (LoSD (average 0.1% of starch for another 14 days. We collected fecal samples during the last seven days of HSD and LoSD and fixed them in 10% formalin. We quantified trophozoites of N. coli using the FLOTAC method. The numbers of N. coli trophozoites were higher during the HSD (mean ± SD: 49.0 ± 134.7 than during the LoSD (3.5 ± 6.8. A generalized linear mixed-effects model revealed significantly lower numbers of the N. coli trophozoites in the feces during the LoSD period in comparison to the HSD period (treatment contrast LoSD vs. HSD: 2.7 ± 0.06 (SE, z = 47.7; p<<0.001. We conclude that our data provide a first indication that starch-rich diet might be responsible for high intensities of infection of N. coli in captive individuals and might predispose them for clinically manifested balantidiasis. We discuss the potential nutritional modifications to host diets that can be implemented in part to control N. coli infections.

  12. Feeding by heterotrophic dinoflagellates and ciliates on the free-living dinoflagellate Symbiodinium sp. (Clade E).

    Science.gov (United States)

    Jeong, Hae Jin; Lim, An Suk; Yoo, Yeong Du; Lee, Moo Joon; Lee, Kyung Ha; Jang, Tae Young; Lee, Kitack

    2014-01-01

    To investigate heterotrophic protists grazing on Symbiodinium sp., we tested whether the common heterotrophic dinoflagellates Gyrodinium dominans, Gyrodinium moestrupii, Gyrodinium spirale, Oblea rotundata, Oxyrrhis marina, and Polykrikos kofoidii and the ciliates Balanion sp. and Parastrombidinopsis sp. preyed on the free-living dinoflagellate Symbiodinium sp. (clade E). We measured the growth and ingestion rates of O. marina and G. dominans on Symbiodinium sp. as a function of prey concentration. Furthermore, we compared the results to those obtained for other algal prey species. In addition, we measured the growth and ingestion rates of other predators at single prey concentrations at which these rates of O. marina and G. dominans were saturated. All predators tested in the present study, except Balanion sp., preyed on Symbiodinium sp. The specific growth rates of O. marina and G. dominans on Symbiodinium sp. increased rapidly with increasing mean prey concentration < ca. 740-815 ng C/ml (7,400-8,150 cells/ml), but became saturated at higher concentrations. The maximum growth rates of O. marina and G. dominans on Symbiodinium sp. (0.87 and 0.61/d) were much higher than those of G. moestrupii and P. kofoidii (0.11 and 0.04/d). Symbiodinium sp. did not support positive growth of G. spirale, O. rotundata, and Parastrombidinopsis sp. However, the maximum ingestion rates of P. kofoidii and Parastrombidinopsis sp. (6.7-10.0 ng C/predator/d) were much higher than those of O. marina and G. dominans on Symbiodinium sp. (1.9-2.1 ng C/predator/d). The results of the present study suggest that Symbiodinium sp. may increase or maintain the populations of some predators.

  13. Proteomic approach to reveal the proteins associated with encystment of the ciliate Euplotes encysticus.

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    Jiwu Chen

    Full Text Available In order to identify and reveal the proteins related to encystment of the ciliate Euplotes encysticus, we analyzed variation in the abundance of the proteins isolated from the resting cyst comparing with proteins in the vegetative cell. 2-D electrophoresis, MALDI-TOF MS techniques and Bioinformatics were used for proteome separation, quantification and identification. The comparative proteomics studies revealed 26 proteins with changes on the expression in the resting cysts, including 12 specific proteins and 14 differential proteins. 12 specific proteins and 10 out of the 14 differential proteins were selected and identified by MALDI-TOF MS. The identified specific proteins with known functions included type II cytoskeletal 1, keratin, Nop16 domain containing protein, protein arginine n-methyltransferase, epsilon-trimethyllysine hydroxylase and calpain-like protein. The identified differential proteins with known functions included Lysozyme C, keratinocyte growth factor, lysozyme homolog AT-2, formate acetyltransferase, alpha S1 casein and cold-shock protein. We discussed the functions of these proteins as well as their contribution in the process of encystment. These identified proteins covered a wide range of molecular functions, including gene regulation, RNA regulation, proteins degradation and oxidation resistance, stress response, material transport and cytoskeleton organization. Therefore, differential expression of these proteins was essential for cell morphological and physiological changes during encystment. This suggested that the peculiar proteins and differential proteins might play important roles in the process of the vegetative cells transforming into the resting cysts. These observations may be novel findings that bring new insights into the detailed mechanisms of dormancy.

  14. Doña Clara e don Luis: l’ennesima 'questione amorosa' all’interno della "venta de Palomeque" (Don Quijote, I, 32-47

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    A. Candeloro

    2012-08-01

    Full Text Available ITDoña Clara e don Luis rappresentano l’ultima coppia d’innamorati che raggiunge la locanda di Palomeque, all’interno di quella serie di disavventure e riconoscimenti insperati che danno vita allo “escandaloso happy end” – come lo definirà ironicamente Juan Benet – nel quale si risolve l’azione principale connessa alle numerose trame secondarie  sviluppate proprio nello spazio “scenico” della famosa locanda. Scopo di questo studio è quello di analizzare le caratteristiche e le problematiche legate alla “questione amorosa” di doña Clara e don Luis, il modo in cui nasce e si sviluppa tale intreccio e le tecniche narrative attraverso cui Cervantes ricollega e amalgama questa storia d’amore a quelle delle altre coppie presenti nella conclusione della Primera Parte del Quijote.ENDoña Clara and don Luis are the last couple of lovers arriving to Palomeque's inn. They are the umpteenth romantic couple in a string of episodes based on several recognition scenes between different couples.  That's why they contribute to reach that "scandalous happy end" – as Juan Benet ironically defined it –, through which the main action of the novel's plot comes to a conclusion and allows to finish, at the same time, all the secondary plots at the inn. This report aims to analyze the characteristics and problems related to "the love issue" between Doña Clara and don Luis and, in special, all the particular narrative techniques which Cervantes uses to link this "love story" with other couples in the first part of Don Quijote.Keywords: Cervantes – Don Quijote – narrative techniques – Doña Clara and Don Luis – love question

  15. Effect of the nature of energy and nitrogen sources on the population of ciliates in the rumen of sheep

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    Houcine Selmi,

    2011-01-01

    Full Text Available The effect of the nature of raw materials in concentrate on the population of ciliated protozoa was evaluated in the rumen of Sicilo-Sarde sheep. Four rams with permanent rumen canulas, 4.8 ± 0.5 years with an average live weight of 45.25 ± 3.5 kg were used. Rams were fed a common base ration of hay oats (1.5 kg DM/ head/day. Animals were supplemented with 500g/head/day of one of four iso-energetic and iso-proteic concentrates. The four concentrates were: A concentrate (10% barley, 43.3% corn, 25% wheat bran, 17.7% soybean meal and 4% CMV, B concentrate (71.5% barley, 17.5% horse bean, soybean meal, 7% and 4% CMV, C concentrate (66% white sorghum, 30% fava, 4% CMV and D concentrate (71% triticale, 18% horse bean, soybean meal, 7%, 4% CMV. The determination of ciliates was performed on unfiltered rumen fluid, collected two hours after the morning meal. The enumeration of protozoa and determination of various genuses were carried out with a HAWSKLEY counting room after several dilutions, using a microscope. The population of ciliates for, the concentrate B was significantly higher (P<0.05 than those for A, C and D concentrates while different genus of these protozoa were comparable among diets. It can be concluded from this study that the use of local resources in the diet of sheep increased micro organisms in the rumen.

  16. Cross-study analysis of genomic data defines the ciliate multigenic epiplasmin family: strategies for functional analysis in Paramecium tetraurelia

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    Ravet Viviane

    2009-06-01

    Full Text Available Abstract Background The sub-membranous skeleton of the ciliate Paramecium, the epiplasm, is composed of hundreds of epiplasmic scales centered on basal bodies, and presents a complex set of proteins, epiplasmins, which belong to a multigenic family. The repeated duplications observed in the P. tetraurelia genome present an interesting model of the organization and evolution of a multigenic family within a single cell. Results To study this multigenic family, we used phylogenetic, structural, and analytical transcriptional approaches. The phylogenetic method defines 5 groups of epiplasmins in the multigenic family. A refined analysis by Hydrophobic Cluster Analysis (HCA identifies structural characteristics of 51 epiplasmins, defining five separate groups, and three classes. Depending on the sequential arrangement of their structural domains, the epiplasmins are defined as symmetric, asymmetric or atypical. The EST data aid in this classification, in the identification of putative regulating sequences such as TATA or CAAT boxes. When specific RNAi experiments were conducted using sequences from either symmetric or asymmetric classes, phenotypes were drastic. Local effects show either disrupted or ill-shaped epiplasmic scales. In either case, this results in aborted cell division. Using structural features, we show that 4 epiplasmins are also present in another ciliate, Tetrahymena thermophila. Their affiliation with the distinctive structural groups of Paramecium epiplasmins demonstrates an interspecific multigenic family. Conclusion The epiplasmin multigenic family illustrates the history of genomic duplication in Paramecium. This study provides a framework which can guide functional analysis of epiplasmins, the major components of the membrane skeleton in ciliates. We show that this set of proteins handles an important developmental information in Paramecium since maintenance of epiplasm organization is crucial for cell morphogenesis.

  17. A mesocosm study of the changes in marine flagellate and ciliate communities in a crude oil bioremediation trial.

    Science.gov (United States)

    Gertler, Christoph; Näther, Daniela J; Gerdts, Gunnar; Malpass, Mark C; Golyshin, Peter N

    2010-07-01

    Protozoan grazers play an important role in controlling the density of crude-oil degrading marine communities as has been evidenced in a number of microcosm experiments. However, small bioreactors contain a low initial titre of protozoa and the growth of hydrocarbon-depleting bacteria is accompanied by the fast depletion of mineral nutrients and oxygen, which makes microcosms rather unsuitable for simulating the sequence of events after the oil spill in natural seawater environment. In the present study, the population dynamics of marine protozoan community have been analysed in a 500 l mesocosm experiment involving bioaugmented oil booms that contained oil sorbents and slow-release fertilisers. A significant increase in numbers of marine flagellates and ciliates on biofilms of oil-degrading microbes was microscopically observed as early as 8 days after the start of the experiment, when protozoa exhibited a population density peak making up to 3,000 cells ml(-1). Further, the protozoan density varied throughout the experiment, but never dropped below 80 cells ml(-1). An 18S rRNA gene-based fingerprinting analysis revealed several changes within the eukaryotic community over the whole course of the experiment. Initial growth of flagellates and small ciliates was followed by a predominance of larger protozoa. According to microscopic observations and SSU rRNA molecular analyses, most predominant were the ciliates belonging to Euplotidae and Scuticociliatia. This is the first study to characterise the eukaryotic communities specifically in a large-scale oil bioremediation trial using both microscopy-based and several molecular techniques.

  18. Role of essential lipids in copepod nutrition: no evidence for trophic upgrading of food quality by a marine ciliate

    DEFF Research Database (Denmark)

    Klein Breteler, W.; Koski, Marja; Rampen, S.

    2004-01-01

    copepod species consumed S. sulcatum at significant rates, but after 3 d, weight-specific ingestion decreased more than 2-fold. Larvae and copepodites feeding on S. sulcatum developed at suboptimal rates, survived poorly and showed abnormal morphology in comparison to control individuals fed a good......., although in low abundance of unuseful Delta7 sterols. Obviously, S. sulcatum did not biochemically enhance bacterial or algal food for subsequent use at higher trophic levels, and only transferred fatty acids without further conversion. The results indicate a deficiency in the ciliate of HUFAs and sterols...

  19. ON THE MARINE CILIATE, Pseudocohnilembus hargisi (PROTOZOA, CILIOPHORA, SCUTICOCILIATIDA) WITH COMPARISON OF ITS RELATED SPECIES

    Institute of Scientific and Technical Information of China (English)

    龚骏; 马宏伟; 宋微波

    2002-01-01

    The living morphology, nuclear apparatus, infraciliature and silverline system of the poorly-known ciliate Pseudocohnilembus hargisi Evans & Thompson, 1964, collected from a shrimp culture pond in Qingdao, China, were examined by observation of the live specimen ; and by the pyridinated carbonate method and Chatton-Lwoff technique. The main characteristics: 13 - 14 (usually 13) longitudinal or slightly spirally arranged somatic kineties; single contractile vacuole with usually 2 ( 1 - 2) pores at posterior ends of the fourth and fifth somatic kineties to the fight of the buccal cavity. Several related congeners were compared and morphometrically tabulated.

  20. Scuticociliatid ciliate outbreak in Australian potbellied seahorse, Hippocampus abdominalis (Lesson, 1827): clinical signs, histopathologic findings, and treatment with metronidazole.

    Science.gov (United States)

    Di Cicco, Emiliano; Paradis, Erika; Stephen, Craig; Turba, Maria Elena; Rossi, Giacomo

    2013-06-01

    A severe outbreak of scuticociliatosis occurred in Australian pot-bellied seahorse, Hippocampus abdominalis (Lesson, 1872), kept at the Vancouver Aquarium Marine Science Centre (Vancouver, British Columbia, Canada). Clinical signs included anorexia, lethargy, irregular respiration, and death. Cytology and histopathology revealed a high number of histophagous ciliated protozoa within the tissues. The parasite, identified as Philasterides dicentrarchi, was observed in several internal organs that appeared edematous and hemorrhagic upon postmortem examination. Severe histopathologic lesions were reported in particular in the ovary, the kidney, and the intestine. This infection was successfully treated with metronidazole via bath therapy. No further evidence of this parasite was found in the treated fish.

  1. Genome-wide analysis of the phosphoinositide kinome from two ciliates reveals novel evolutionary links for phosphoinositide kinases in eukaryotic cells.

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    George Leondaritis

    Full Text Available BACKGROUND: The complexity of phosphoinositide signaling in higher eukaryotes is partly due to expansion of specific families and types of phosphoinositide kinases (PIKs that can generate all phosphoinositides via multiple routes. This is particularly evident in the PI3Ks and PIPKs, and it is considered an evolutionary trait associated with metazoan diversification. Yet, there are limited comprehensive studies on the PIK repertoire of free living unicellular organisms. METHODOLOGY/PRINCIPAL FINDINGS: We undertook a genome-wide analysis of putative PIK genes in two free living ciliated cells, Tetrahymena and Paramecium. The Tetrahymena thermophila and Paramecium tetraurelia genomes were probed with representative kinases from all families and types. Putative homologs were verified by EST, microarray and deep RNA sequencing database searches and further characterized for domain structure, catalytic efficiency, expression patterns and phylogenetic relationships. In total, we identified and characterized 22 genes in the Tetrahymena thermophila genome and 62 highly homologues genes in Paramecium tetraurelia suggesting a tight evolutionary conservation in the ciliate lineage. Comparison to the kinome of fungi reveals a significant expansion of PIK genes in ciliates. CONCLUSIONS/SIGNIFICANCE: Our study highlights four important aspects concerning ciliate and other unicellular PIKs. First, ciliate-specific expansion of PI4KIII-like genes. Second, presence of class I PI3Ks which, at least in Tetrahymena, are associated with a metazoan-type machinery for PIP3 signaling. Third, expansion of divergent PIPK enzymes such as the recently described type IV transmembrane PIPKs. Fourth, presence of possible type II PIPKs and presumably inactive PIKs (hence, pseudo-PIKs not previously described. Taken together, our results provide a solid framework for future investigation of the roles of PIKs in ciliates and indicate that novel functions and novel regulatory

  2. Effect of the rumen ciliates Entodinium caudatum, Epidinium ecaudatum and Eudiplodinium maggii, and combinations thereof, on ruminal fermentation and total tract digestion in sheep.

    Science.gov (United States)

    Zeitz, Johanna O; Amelchanka, Sergej L; Michałowski, Tadeusz; Wereszka, Krzysztof; Meile, Leo; Hartnack, Sonja; Kreuzer, Michael; Soliva, Carla R

    2012-06-01

    The quantitative importance of individual ciliate species and their interaction in the rumen is still unclear. The present study was performed to test whether there are species differences in the influence on ruminal fermentation in vivo and if combinations of ciliates act additive in that respect. Six adult wethers fed a hay-concentrate diet were defaunated, then refaunated either with Entodinium caudatum (EC), Epidinium ecaudatum (EE) or Eudiplodinium maggii (EM) alone, then progressively with all possible species combinations. Feed, faeces, urine, ruminal fluid and gas were sampled for eight days always after at least 21 days of adaptation. With a linear mixed model, accounting for the 2 x 2 x 2 full factorial study design, mean marginal effect sizes, i.e., the magnitude of change in variables as caused by the presence of each ciliate species or of combinations of them, were estimated. The apparent digestibility of organic matter and neutral detergent fibre remained unaffected. The apparent N digestibility increased by 0.054 with EM (0.716 with defaunation). Ruminal ammonia increased by 1.6, 4.0 and 8.7 mmol/l in the presence of EM, EC and EE, respectively, compared to defaunation (6.9 mmol/l). In the EM + EE combination, ruminal ammonia was lower than would have been expected from an additive effect. With EE, total short-chain fatty acids increased by 23 mmol/l (100 mmol/l with defaunation), but not when EE was combined with EM. The acetate-to-propionate ratio decreased by 0.73 units in the presence of EE (4.0 with defaunation), but only when EE was the sole ciliate species in the rumen. In the presence of any ciliate species, the 16S rDNA copies of total Bacteria and major fibrolytic species decreased to 0.52- and 0.22-fold values, respectively of that found without protozoa. Total Archaea were unaffected; however, Methanobacteriales copies increased 1.44-fold with EC. The CH4-to-CO2 ratio of ruminal gas decreased by 0.036 with EM and 0.051 with EE (0.454 with

  3. Coding genes and molecular structures of the diffusible signalling proteins (pheromones) of the polar ciliate, Euplotes nobilii.

    Science.gov (United States)

    Vallesi, Adriana; Alimenti, Claudio; Pedrini, Bill; Di Giuseppe, Graziano; Dini, Fernando; Wüthrich, Kurt; Luporini, Pierangelo

    2012-12-01

    In protozoan ciliates, diffusible signalling proteins (pheromones) regulate the vegetative growth and mating interactions. Here, the coding genes and the structures of the encoded pheromones were studied in genetically distinct wild-type strains representing interbreeding Antarctic and Arctic populations of the marine ciliate Euplotes nobilii. Determination of seven allelic pheromone-coding DNA sequences revealed that an unusual extension and high structural conservation of the 5' non-coding region are peculiar traits of this gene family, implying that this region is directly involved in the mechanism of pheromone gene expression, possibly through phenomena of intron splicing and/or frame-shifting. For four pheromones, the three-dimensional structures were determined by nuclear magnetic resonance spectroscopy in solution. These structures show that the pheromones represent a protein family which adapts to its polar environment by combining a structurally stable core of a three-helix bundle with extended polypeptide segments that are devoid of regular secondary structures and concomitantly show enhanced structural flexibility.

  4. OCT-based quantification of flow velocity, shear force, and power generated by a biological ciliated surface (Conference Presentation)

    Science.gov (United States)

    Huang, Brendan K.; Khokha, Mustafa K.; Loewenberg, Michael; Choma, Michael A.

    2016-03-01

    In cilia-driven fluid flow physiology, quantification of flow velocity, shearing force, and power dissipation is important in defining abnormal ciliary function. The capacity to generate flow can be robustly described in terms of shearing force. Dissipated power can be related to net ATP consumption by ciliary molecular motors. To date, however, only flow velocity can be routinely quantified in a non-invasive, non-contact manner. Additionally, traditional power-based metrics rely on metabolic consumption that reflects energy consumption not just from cilia but also from all active cellular processes. Here, we demonstrate the estimation of all three of these quantities (flow velocity, shear force, and power dissipation) using only optical coherence tomography (OCT). Specifically, we develop a framework that can extract force and power information from vectorial flow velocity fields obtained using OCT-based methods. We do so by (a) estimating the viscous stress tensor from flow velocity fields to estimate shearing force and (b) using the viscous stress tensor to estimate the power dissipation function to infer total mechanical power. These estimates have the advantage of (a) requiring only a single modality, (b) being non-invasive in nature, and (c) being reflective of only the net power work generated by a ciliated surface. We demonstrate our all-optical approach to the estimation of these parameters in the Xenopus animal model system under normal and increased viscous loading. Our preliminary data support the hypothesis that the Xenopus ciliated surface can increase force output under loading conditions.

  5. Nuclear structure studies in the area around the valence maximum of {sup 170}Dy with CLARA+PRISMA

    Energy Technology Data Exchange (ETDEWEB)

    Soederstroem, Paer-Anders [Uppsala University (Sweden)

    2009-07-01

    While the existence of shell closures and the search for exotic doubly magic nuclei is a cornerstone of our understanding of the atomic nucleus, their even-even, doubly-mid-shell counterparts are arguably even more rare. Above the sd shell, the corresponding doubly mid-shell, even-even systems which are particle bound are limited to {sup 28}Si, {sup 38}Si, {sup 48}Cr and {sup 170}Dy. Assuming the standard spherical shell gaps, {sup 170}Dy might naively be expected to be amongst the most collective of all nuclei. The double mid-shell at {sup 170}Dy may also represent the single best hope in the entire Segre chart for the empirical realization of the SU(3) dynamical symmetry of the interacting boson model. An experiment for nuclear structure studies of {sup 170}Dy and its neighbors has been performed at Laboratori Nazionali di Legnaro. Multi-nucleon transfer reactions with a {sup 82}Se beam on a {sup 170}Er target were used to reach the neutron-rich isotopes. The reaction fragments were identified using the magnetic spectrometer PRISMA and the {gamma}-ray spectra were recorded using the CLARA germanium detector array. The analysis of this data is ongoing. Preliminary {gamma}-ray spectra for neutron rich isotopes in this area are presented as well as relative cross sections for production of these isotopes in multi-nucleon transfer reactions.

  6. PRODUCCIÓN PRIMARIA EN UN LAGO DE AGUAS CLARAS DE LA AMAZONÍA COLOMBIANA (LAGO BOA

    Directory of Open Access Journals (Sweden)

    GABRIEL ANTONIO PINILLA AGUDELO

    2009-01-01

    Full Text Available Dentro de los aspectos funcionales de un sistema acuático uno de los más determinantes es la producción fitoplanctónica. En este trabajo se midió la producción primaria del fitoplancton (método del 14C en un lago de aguas claras de la Amazonía colombiana, en diferentes momentos del ciclo hidrológico. La producción primaria osciló entre 0,6 y 2,3 g C m-2 d-1, valor este último medido durante la fase de aguas bajas. Estos resultados indican que la comunidad fitoplanctónica del lago Boa fluctúa desde condiciones de muy baja capacidad de asimilación de carbono inorgánico (aguas altas, hasta momentos en que este potencial se incrementa hasta cuatro veces (aguas bajas. Tales cambios drásticos obedecen a las fluctuaciones en la abundancia de microalgas, las que a su vez se presentan como respuesta a la variación trófica que tiene el lago durante el ciclo hidrológico. De esta manera, se pasa de condiciones oligotróficas en la época de inundación a un estado eutrófico cuando el sistema se desconecta del río en aguas bajas.

  7. Erudition, Dialogue and Instruction in «Noches claras» by Manuel de Faria e Sousa

    Directory of Open Access Journals (Sweden)

    Paulo Silva Pereira

    2015-11-01

    Full Text Available In Noches claras by Manuel de Faria e Sousa, among discourses and chapters which serve different purposes, an intense programme of cultural divulgation starts to take form, which offers the readers themes of social and religious nature as well as of moral philosophy, stimulating their intellectual curiosity. By combining the strong didactic aesthetics of the miscellanea, as it was cultivated in the Iberian Peninsula in the 16th and 17th centuries, with the specific features of dialogue, the project gained density and gave way to a more pleasant use than the mere occasional search for information. The variety in themes and sense of erudition, resulting from a wide range of ancient and modern cultural and religious sources, are now seen as part of a more coherent composition, thus overcoming the risks of fragmented reading. On the other hand, the autobiographical drive which can be found across a significant part of Faria e Sousa’s literary production, allows him to come closer to the essay genre, as the author is regarded as the one who is responsible for carefully choosing the material, organizing and exposing it based on his knowledge and life experience which were the marks of the discrete man.

  8. Predicted liquefaction in the greater Oakland area and northern Santa Clara Valley during a repeat of the 1868 Hayward Fault (M6.7-7.0) earthquake

    Science.gov (United States)

    Holzer, Thomas L.; Noce, Thomas E.; Bennett, Michael J.

    2010-01-01

    Probabilities of surface manifestations of liquefaction due to a repeat of the 1868 (M6.7-7.0) earthquake on the southern segment of the Hayward Fault were calculated for two areas along the margin of San Francisco Bay, California: greater Oakland and the northern Santa Clara Valley. Liquefaction is predicted to be more common in the greater Oakland area than in the northern Santa Clara Valley owing to the presence of 57 km2 of susceptible sandy artificial fill. Most of the fills were placed into San Francisco Bay during the first half of the 20th century to build military bases, port facilities, and shoreline communities like Alameda and Bay Farm Island. Probabilities of liquefaction in the area underlain by this sandy artificial fill range from 0.2 to ~0.5 for a M7.0 earthquake, and decrease to 0.1 to ~0.4 for a M6.7 earthquake. In the greater Oakland area, liquefaction probabilities generally are less than 0.05 for Holocene alluvial fan deposits, which underlie most of the remaining flat-lying urban area. In the northern Santa Clara Valley for a M7.0 earthquake on the Hayward Fault and an assumed water-table depth of 1.5 m (the historically shallowest water level), liquefaction probabilities range from 0.1 to 0.2 along Coyote and Guadalupe Creeks, but are less than 0.05 elsewhere. For a M6.7 earthquake, probabilities are greater than 0.1 along Coyote Creek but decrease along Guadalupe Creek to less than 0.1. Areas with high probabilities in the Santa Clara Valley are underlain by young Holocene levee deposits along major drainages where liquefaction and lateral spreading occurred during large earthquakes in 1868 and 1906.

  9. Ciliary-propelling mechanism, effect of temperature and viscosity on swimming speed, and adaptive significance of ‘jumping’ in the ciliate Mesodinium rubrum

    DEFF Research Database (Denmark)

    Riisgård, Hans Ulrik; Larsen, Poul Scheel

    2009-01-01

    Beating cilia are important organelles, not only for water pumping in many active filter-feeding organisms, but also for the swimming activity of ciliates and other aquatic organisms that use cilia for propulsion. The present study concerns the effect of temperature-dependent viscosity of the amb...

  10. Don Edwards San Francisco Bay National Wildlife Refuge : Self Monitoring Program for Alviso Ponds Within South San Francisco Bay Low Salinity Salt Ponds Alameda, Santa Clara, and San Mateo Counties, California : 2005

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — This annual report summarizes the results of the 2005 water quality sampling conducted at the Alviso Ponds in Santa Clara County, California, which are part of the...

  11. Don Edwards San Francisco Bay National Wildlife Refuge : Self Monitoring Program for Alviso Ponds Within South San Francisco Bay Low Salinity Salt Ponds Alameda, Santa Clara, and San Mateo Counties, California : 2006

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — This annual report summarizes the results of the 2006 water quality sampling conducted at the Alviso Ponds in Santa Clara County, California, which are part of the...

  12. Don Edwards San Francisco Bay National Wildlife Refuge : Self Monitoring Program for Alviso Ponds Within South San Francisco Bay Low Salinity Salt Ponds Alameda, Santa Clara, and San Mateo Counties, California : 2007

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — This annual report summarizes the results of the 2007 water quality sampling conducted at the Alviso Ponds in Santa Clara County, California, which are part of the...

  13. Don Edwards San Francisco Bay National Wildlife Refuge : Self Monitoring Program for Alviso Ponds Within South San Francisco Bay Low Salinity Salt Ponds Alameda, Santa Clara, and San Mateo Counties, California : 2008

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — This annual report summarizes the results of the 2008 water quality sampling conducted at the Alviso Ponds in Santa Clara County, California, which are part of the...

  14. Don Edwards San Francisco Bay National Wildlife Refuge : Self Monitoring Program for Alviso Ponds Within South San Francisco Bay Low Salinity Salt Ponds Alameda, Santa Clara, and San Mateo Counties, California : 2010

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — This annual report summarizes the results of the 2010 water quality sampling conducted at the Alviso Ponds in Santa Clara County, California, which are part of the...

  15. Don Edwards San Francisco Bay National Wildlife Refuge : Self Monitoring Program for Alviso Ponds Within South San Francisco Bay Low Salinity Salt Ponds Alameda, Santa Clara, and San Mateo Counties, California : 2009

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — This annual report summarizes the results of the 2009 water quality sampling conducted at the Alviso Ponds in Santa Clara County, California, which are part of the...

  16. Un peu de désordre n'est pas du tout désagréable Clara Gaspar se passionne pour son métier au CERN, sans jamais oublier son Portugal

    CERN Multimedia

    Imhof, Michel

    2002-01-01

    Clara Gaspar is passionately fond of her job at CERN and enjoys the enrichment of life being in an international community. She misses some things and will never forget Portugal but counts Geneva as her home (2 pagees)

  17. Don Edwards San Francisco Bay National Wildlife Refuge : Self Monitoring Program for Alviso Ponds Within South San Francisco Bay Low Salinity Salt Ponds Alameda, Santa Clara, and San Mateo Counties, California : 2004

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — This annual report summarizes the results of the 2004 water quality sampling conducted at the Alviso Ponds in Santa Clara County, California, which are part of the...

  18. Application of seismic refraction tomography for tunnel design in Santa Clara Mountain, San Juan, Argentina Application of seismic refraction tomography for tunnel design in Santa Clara Mountain, San Juan, Argentina

    Directory of Open Access Journals (Sweden)

    Imhof Armando Luis

    2011-12-01

    Full Text Available

    A geophysical survey involving seismic refraction tomography (SRT for mapping 'P' waves was carried out in Sierra Santa Clara, San Juan Province, Argentina in July 2009. The purpose of the geophysical survey was to determine the degree of fracturing and the rigidity of the rock mass through which it is planned to build a 290 m long road tunnel traversing the mountain almost perpendicular to the axis thereof, at around 100 m depth from the summit.

    Several difficulties arose from the operational point of view which made it almost impossible to conduct fieldwork in normal circumstances. Firstly, the topography had almost 45° slopes and 100 m research depths which would have involved having had to use explosives to generate seismic waves reaching sensors which had sufficient signal-to-noise ratio for distinguishing them. Legal restrictions regarding the use of explosives on the one hand and insufficient power when using hammer blows on the other made it necessary to design and build a gas-powered gun to achieve the minimum energy (2 kJ required for detecting seismic signals.

    Secondly, using conventional interpretation methods involving layered models was inoperable in such geological structures; seismic tomography methods were thus used which make use of the velocity gradient concept (both lateral and in-depth. This allowed mapping subsurface velocity variations in the form of velocity contour lines.

    The methodology used with the new seismic waves' source generator, as well as SRT application in this type of geological structure, demonstrated that satisfactory results could be obtained for this kind of geophysical study for geotechnical purposes.

    A geophysical survey involving seismic refraction tomography (SRT for mapping 'P' waves was

  19. FACTORES RELACIONADOS CON LA URGENCIA HIPERTENSIVA EN UN ÁREA DE SALUD URBANA DE SANTA CLARA / Factors linked to hypertensive emergency in an urban health area of Santa Clara

    Directory of Open Access Journals (Sweden)

    Alexis López Casanova

    2009-12-01

    Full Text Available Introduction and objectives: Arterial hypertension manifest itself in many individuals with the appearance of an acute event, the hypertensive emergency, which takes place many times in hypertensive individuals who have not been diagnosed or who have been incorrectly treated. The aim of this research is to characterize the factors linked to the hypertensive emergency. Method: A descriptive, cross-sectional study in a sample formed by 150 patients presenting the above mentioned condition who were treated at the Emergency Department of the Santa Clara Polyclinic during the period from January 2007 to January 2008. The clinical and epidemiological variables were gathered by means of interviews with the patients. Chi square was used in the statistical analysis. Results: There was a predominance of male patients (54 %, the age group between 46 and 60 years of age (54 % and the white race in both sexes (57,4 %. The most common associated illnesses were ischemic heart disease (18.6 % and diabetes mellitus (14 %. Captopril was the first therapeutic choice in 82,7 percent of the cases, presenting a high resolution rate (80,6 %. It was determined that 49 percent of the patients were not correctly controlled, and that the adherence to the pharmacologic treatment was moderate in 49,3 percent and bad in 30 percent of the cases. Conclusions: The hypertensive emergency prevailed in males and in the age group between 46 and 60 years of age. Ischemic heart disease and diabetes mellitus were the most common associated illnesses; as well as a family history of arterial hypertension, smoking and obesity as atherosclerotic risk factors. Arterial hypertension and diabetes mellitus were associated with a higher lack of response to standard therapy. Captopril was the most commonly usedmedication, showing a high resolution rate. The lack of adherence to the treatment and the inadequate control prevailed.

  20. Taxonomic Studies on a New Marine Ciliate, Apocoleps magnus gen. nov., spec. nov. (Ciliophora, Colepidae),Isolated from Qingdao, China

    Institute of Scientific and Technical Information of China (English)

    CHEN Xiangrui; Alan Warren; SONG Weibo

    2009-01-01

    The morphology and infraciliature of a new marine colepid ciliate, Apocoleps magnus gen. nov., spee. nov., are described based on living observations and silver impregnations. The new genus Apocoleps is characterized by having 8 (vs. 6 in most other related genera) armour tiers, spines at both ends of the cell, 3 adoral organelles and plates with 4 reniform uni-windows. Apocoleps magnus spec. nov. is defined by the following features: body elongated and slightly curved, about 100-120μm×35-45 μm in vivo; anterior tertiary tier plate with four uni-windows, most secondary and main tier plates with four uni-windows, posterior tertiary tier plate with two uni-windows; left plate margin slightly serrated; on average 23 transverse and 22 longitudinal ciliary rows; one terminal contractile vacuole; marine habitat.

  1. Directed Induction of Functional Multi-ciliated Cells in Proximal Airway Epithelial Spheroids from Human Pluripotent Stem Cells

    Directory of Open Access Journals (Sweden)

    Satoshi Konishi

    2016-01-01

    Full Text Available Multi-ciliated airway cells (MCACs play a role in mucociliary clearance of the lung. However, the efficient induction of functional MCACs from human pluripotent stem cells has not yet been reported. Using carboxypeptidase M (CPM as a surface marker of NKX2-1+-ventralized anterior foregut endoderm cells (VAFECs, we report a three-dimensional differentiation protocol for generating proximal airway epithelial progenitor cell spheroids from CPM+ VAFECs. These spheroids could be induced to generate MCACs and other airway lineage cells without alveolar epithelial cells. Furthermore, the directed induction of MCACs and of pulmonary neuroendocrine lineage cells was promoted by adding DAPT, a Notch pathway inhibitor. The induced MCACs demonstrated motile cilia with a “9 + 2” microtubule arrangement and dynein arms capable of beating and generating flow for mucociliary transport. This method is expected to be useful for future studies on human airway disease modeling and regenerative medicine.

  2. The giant ciliate Zoothamnium niveum and its thiotrophic epibiont Candidatus Thiobios zoothamnicoli: a model system to study interspecies cooperation

    Directory of Open Access Journals (Sweden)

    Monika eBright

    2014-04-01

    Full Text Available Symbioses between chemoautotrophic sulfur-oxidizing (thiotrophic bacteria and protists or animals are among the most diverse and prevalent in the ocean. They are extremely difficult to maintain in aquaria and no thiotrophic symbiosis involving an animal host has ever been successfully cultivated. In contrast, we have cultivated the giant ciliate Zoothamnium niveum and its obligate ectosymbiont Cand. Thiobios zoothamnicoli in small flow-through aquaria. This review provides an overview of the host and the symbiont and their phylogenetic relationships. We summarize our knowledge on the ecology, geographic distribution and life cycle of the host, on the vertical transmission of the symbiont, and on the cultivation of this symbiosis. We then discuss the benefits and costs involved in this cooperation compared with other thiotrophic symbioses and outline our view on the evolution and persistence of this byproduct mutualism.

  3. First Record and Redefinition of the Qingdao Population of Marine Ciliate Cardiostomatella vermiformis (Kahl, 1928) Corliss, 1960 (Protozoa, Ciliophora)

    Institute of Scientific and Technical Information of China (English)

    2007-01-01

    The living morphology and infraciliature of a marine ciliate, Cardiostomatella vermiformis isolated from a sand beach of the Jiaozhou Bay near Qingdao, China, were investigated by live observation, protargol and silver carbonate impregnation methods. Both the morphological and morphometric data largely agree with former records. Based on the data obtained, an improved diagnosis for Cardiostomatella vermiformis is supplied: Large marine Cardiostomatella with cylindrical body shape and several prolonged caudal cilia; cells in vivo about (90-500)μm × (30-120)μm; macronucleus beaded; single contractile vacuole caudally positioned; buccal apparatus conspicuously small, genus typical; three to six postoral kineties; 96-130 somatic kineties. This species is recorded for the first time in China.

  4. Complementary Notes on a‘Well-known' Marine Heterotrichous Ciliate, Folliculinopsis producta (Wright, 1859) Fraure-Fremiet,1936 (Protozoa, Ciliophora)

    Institute of Scientific and Technical Information of China (English)

    JI Daode; LIN Xiaofeng; SONG Weibo

    2004-01-01

    The living morphology and infraciliature of a heterotrichous ciliate, Folliculinopsis producta (Wright, 1859)Fraure-Fremiet, 1936, which was collected from the north coast of China, were investigated by in vivo observation and protargol impregnation techniques. As a new contribution, a redescription is presented: large Folliculinopsis of green to dark green in color, 800-1500μm in size; two peristomial lobes of approximately equal size, 300-400μm in length; adoral zone of membranelles containing about 1000 membranelles, lying along lobe margins and exhibiting two circles within buccal cavity;50-70 somatic kineties in mid-body; macronucleus miniliform, consisting of about 20 beads; lorica smooth, vase-shaped,(300 500)μm ×(90-130)μm in size, with 5-12 spiral ridges on neck tube; marine habitat.

  5. Simulated ground motion in Santa Clara Valley, California, and vicinity from M≥6.7 scenario earthquakes

    Science.gov (United States)

    Harmsen, Stephen C.; Hartzell, Stephen

    2008-01-01

    Models of the Santa Clara Valley (SCV) 3D velocity structure and 3D finite-difference software are used to predict ground motions from scenario earthquakes on the San Andreas (SAF), Monte Vista/Shannon, South Hayward, and Calaveras faults. Twenty different scenario ruptures are considered that explore different source models with alternative hypocenters, fault dimensions, and rupture velocities and three different velocity models. Ground motion from the full wave field up to 1 Hz is exhibited as maps of peak horizontal velocity and pseudospectral acceleration at periods of 1, 3, and 5 sec. Basin edge effects and amplification in sedimentary basins of the SCV are observed that exhibit effects from shallow sediments with relatively low shear-wave velocity (330 m/sec). Scenario earthquakes have been simulated for events with the following magnitudes: (1) M 6.8–7.4 Calaveras sources, (2) M 6.7–6.9 South Hayward sources, (3) M 6.7 Monte Vista/Shannon sources, and (4) M 7.1–7.2 Peninsula segment of the SAF sources. Ground motions are strongly influenced by source parameters such as rupture velocity, rise time, maximum depth of rupture, hypocenter, and source directivity. Cenozoic basins also exert a strong influence on ground motion. For example, the Evergreen Basin on the northeastern side of the SCV is especially responsive to 3–5-sec energy from most scenario earthquakes. The Cupertino Basin on the southwestern edge of the SCV tends to be highly excited by many Peninsula and Monte Vista fault scenarios. Sites over the interior of the Evergreen Basin can have long-duration coda that reflect the trapping of seismic energy within this basin. Plausible scenarios produce predominantly 5-sec wave trains with greater than 30 cm/sec sustained ground-motion amplitude with greater than 30 sec duration within the Evergreen Basin.

  6. The Santa Clara Strength of Religious Faith Questionnaire (SCSORF): a validation study on Iranian Muslim patients undergoing dialysis.

    Science.gov (United States)

    Pakpour, Amir H; Plante, Thomas G; Saffari, Mohsen; Fridlund, Bengt

    2014-12-01

    The Santa Clara Strength of Religious Faith Questionnaire (SCSORF) is an often used and validated scale that is uncommonly utilized in culturally diverse populations. The purpose of this research investigation was to adapt the SCSORF for use among Iranian Muslim patients undergoing dialysis and to examine the reliability and validity of the scale among this population. A total of 428 patients (228 females, 200 males, M age = 52.2 years, SD = 10) were selected from five dialysis center in Tehran and Qazvin, Iran. A comprehensive forward-backward translation system was used for cross-cultural translation. Patients completed a baseline questionnaire obtaining demographic and clinical information as well as the SCSORF, the Age Universal Religious Orientation Scale (AUROS), the religious life inventory (RLI), and the Duke University religion index (DUREL). 2 weeks later, patients were asked to complete the SCSORF once again. Reliability of the SCSORF was examined using internal consistency and test-rest reliability. Convergent validity and factor structure using exploratory factor analysis (EFA) and confirmatory factor analysis (CFA) were also examined. Cronbach's α for the single construct of the SCSORF was 0.89 with adequate test-retest reliability measured over a 2 week period. SCSORF scores were significantly correlated with AUROS, RLI and the DUREL. The EFA generated a single factor solution for the SCSORF while these results were confirmed by the CFA in an independent sample. Findings demonstrated that the SCSORF has favorable reliability, convergent validity, and divergent validity among Iranian Muslim patients undergoing dialysis and is recommended for use by clinicians (e.g., nephrologists) to measure strength of religious faith among patients.

  7. Reach-scale channel sensitivity to multiple human activities and natural events: Lower Santa Clara River, California, USA

    Science.gov (United States)

    Downs, Peter W.; Dusterhoff, Scott R.; Sears, William A.

    2013-05-01

    Understanding the cumulative impact of natural and human influences on the sensitivity of channel morphodynamics, a relative measure between the drivers for change and the magnitude of channel response, requires an approach that accommodates spatial and temporal variability in the suite of primary stressors. Multiple historical data sources were assembled to provide a reach-scale analysis of the lower Santa Clara River (LSCR) in Ventura County, California, USA. Sediment supply is naturally high due to tectonic activity, earthquake-generated landslides, wildfires, and high magnitude flow events during El Niño years. Somewhat typically for the region, the catchment has been subject to four reasonably distinct land use and resource management combinations since European-American settlement. When combined with analysis of channel morphological response (quantifiable since ca. 1930), reach-scale and temporal differences in channel sensitivity become apparent. Downstream reaches have incised on average 2.4 m and become narrower by almost 50% with changes focused in a period of highly sensitive response after about 1950 followed by forced insensitivity caused by structural flood embankments and a significant grade control structure. In contrast, the middle reaches have been responsive but are morphologically resilient, and the upstream reaches show a mildly sensitive aggradational trend. Superimposing the natural and human drivers for change reveals that large scale stressors (related to ranching and irrigation) have been replaced over time by a suite of stressors operating at multiple spatial scales. Lower reaches have been sensitive primarily to 'local' scale impacts (urban growth, flood control, and aggregate mining) whereas, upstream, catchment-scale influences still prevail (including flow regulation and climate-driven sediment supply factors). These factors illustrate the complexity inherent to cumulative impact assessment in fluvial systems, provide evidence for a

  8. Measuring religious faith in cancer patients: reliability and construct validity of the Santa Clara Strength of Religious Faith questionnaire.

    Science.gov (United States)

    Sherman, A C; Simonton, S; Adams, D C; Latif, U; Plante, T G; Burns, S K; Poling, T

    2001-01-01

    Growing attention has focused on associations between religious involvement and health outcomes for cancer patients. Unfortunately, research has been hampered by lack of measures suitable for use in oncology settings. This study examined the performance of one recently developed measure, the Santa Clara Strength of Religious Faith Questionnaire (SCSORF). Initial investigations with cancer patients in a bone marrow transplant program and with non-oncology patients yielded promising results. This study provided additional information about temporal stability and convergent validity. The measure was evaluated in two well-defined samples: (1) 95 breast cancer patients, and (2) 53 healthy young adults. Most of the cancer patients had recent diagnoses and localized or regional disease. In each sample, the instrument demonstrated high test-retest reliability (r's=0.82-0.93) and internal consistency (r's=0.95-0.97). It displayed strong correlations with measures of intrinsic religiosity (r's=0.67-0.82, p<0.0001), and moderate correlations with organizational religiosity (r's=0.61-069, p<0.0001), non-organizational religiosity (r's=0.52-0.55, p<0.0001), comfort from religion (r=0.58, p<0.0001), and ratings of self as religious (r=0.58, p<0.0001). Among cancer patients, scores were significantly associated with optimism (r=0.30, p<0.01), but not with openness of family communication about cancer or perceived social support. These data build on previous findings with cancer patients, and suggest that the SCSORF may be a useful measure of religious faith in oncology settings.

  9. Ground water/surface water responses to global climate simulations, Santa Clara-Calleguas Basin, Ventura, California

    Science.gov (United States)

    Hanson, R.T.; Dettinger, M.D.

    2005-01-01

    Climate variations can play an important, if not always crucial, role in successful conjunctive management of ground water and surface water resources. This will require accurate accounting of the links between variations in climate, recharge, and withdrawal from the resource systems, accurate projection or predictions of the climate variations, and accurate simulation of the responses of the resource systems. To assess linkages and predictability of climate influences on conjunctive management, global climate model (GCM) simulated precipitation rates were used to estimate inflows and outflows from a regional ground water model (RGWM) of the coastal aquifers of the Santa ClaraCalleguas Basin at Ventura, California, for 1950 to 1993. Interannual to interdecadal time scales of the El Nin??o Southern Oscillation (ENSO) and Pacific Decadal Oscillation (PDO) climate variations are imparted to simulated precipitation variations in the Southern California area and are realistically imparted to the simulated ground water level variations through the climate-driven recharge (and discharge) variations. For example, the simulated average ground water level response at a key observation well in the basin to ENSO variations of tropical Pacific sea surface temperatures is 1.2 m/??C, compared to 0.9 m/??C in observations. This close agreement shows that the GCM-RGWM combination can translate global scale climate variations into realistic local ground water responses. Probability distributions of simulated ground water level excursions above a local water level threshold for potential seawater intrusion compare well to the corresponding distributions from observations and historical RGWM simulations, demonstrating the combination's potential usefulness for water management and planning. Thus the GCM-RGWM combination could be used for planning purposes and - when the GCM forecast skills are adequate - for near term predictions.

  10. Laminin-332 alters connexin profile, dye coupling and intercellular Ca2+ waves in ciliated tracheal epithelial cells

    Directory of Open Access Journals (Sweden)

    Olsen Colin E

    2006-08-01

    Full Text Available Abstract Background Tracheal epithelial cells are anchored to a dynamic basement membrane that contains a variety of extracellular matrix proteins including collagens and laminins. During development, wound repair and disease of the airway epithelium, significant changes in extracellular matrix proteins may directly affect cell migration, differentiation and events mediated by intercellular communication. We hypothesized that alterations in cell matrix, specifically type I collagen and laminin α3β3γ2 (LM-332 proteins within the matrix, directly affect intercellular communication in ciliated rabbit tracheal epithelial cells (RTEC. Methods Functional coupling of RTEC was monitored by microinjection of the negatively charged fluorescent dyes, Lucifer Yellow and Alexa 350, into ciliated RTEC grown on either a LM-332/collagen or collagen matrix. Coupling of physiologically significant molecules was evaluated by the mechanism and extent of propagated intercellular Ca2+ waves. Expression of connexin (Cx mRNA and proteins were assayed by reverse transcriptase – polymerase chain reaction and immunocytochemistry, respectively. Results When compared to RTEC grown on collagen alone, RTEC grown on LM-332/collagen displayed a significant increase in dye transfer. Although mechanical stimulation of RTEC grown on either LM-332/collagen or collagen alone resulted in intercellular Ca2+ waves, the mechanism of transfer was dependent on matrix: RTEC grown on LM-332/collagen propagated Ca2+waves via extracellular purinergic signaling whereas RTEC grown on collagen used gap junctions. Comparison of RTEC grown on collagen or LM-332/collagen matrices revealed a reorganization of Cx26, Cx43 and Cx46 proteins. Conclusion Alterations in airway basement membrane proteins such as LM-332 can induce connexin reorganizations and result in altered cellular communication mechanisms that could contribute to airway tissue function.

  11. Insights into the phylogeny of sporadotrichid ciliates (Protozoa, Ciliophora: Hypotricha) based on genealogical analyses of multiple molecular markers

    Institute of Scientific and Technical Information of China (English)

    HU Xiaoyan; HU Xiaozhong; Khaled A. S. AL-RASHEID; Saieh A. AL-FARRAJ; SONG Weibo

    2011-01-01

    The sporadotrichid ciliates are an especially diverse group. A number of investigators have studied the morphological, morphogenetic, and molecular relationships among members of this group. Despite this, a consistent classification is still lacking and several important questions about the phylogenetic relationships within this group remain unsolved. To improve our understanding of these relationships, we constructed phylogenetic trees using the nucleotide sequences of the small-subunit rRNA (SSrRNA) gene and amino acid sequences of actin I and -αtubulin. Analyses of SSrRNA gene sequences indicated that: 1) the Sporadotrichida sensu Lynn (2008) and the Oxytrichidae are polyphyletic; 2) the Uroleptus species, which are classified to urostylids, formed a sister group with the oxytrichids; 3) Halteria grandinella, which is grouped morphologically with oligotrich species, clustered within the oxytrichids. These results are congruent with previous studies based on SSrRNA gene sequences. However, the amino acid sequences of actin I and α-tubulin yielded different topologies. The main results are: 1) in all phylogenetic trees, the genus Oxylricha was paraphyletic; 2) Uroleptus was sister to a subset of Urostyla and Holosticha, albeit with low supporting values; 3) Halteria grandinella was separated distantly from the Oxytrichidae in trees inferred from actin I amino acid sequences but clustered with oligotrichids in the α-tubulin analysis. The inconsistency among the trees inferred from these different molecular markers may be caused by rapidly accumulated genetic characterizations of ciliates. Further studies with additional molecular markers and sampling of more taxa are expected to better address the relationships among sporadotrichids.

  12. Insights into the phylogeny of sporadotrichid ciliates (Protozoa, Ciliophora: Hypotricha) based on genealogical analyses of multiple molecular markers

    Science.gov (United States)

    Hu, Xiaoyan; Hu, Xiaozhong; Al-Rasheid, Khaled A. S.; Al-Farraj, Saleh A.; Song, Weibo

    2011-01-01

    The sporadotrichid ciliates are an especially diverse group. A number of investigators have studied the morphological, morphogenetic, and molecular relationships among members of this group. Despite this, a consistent classification is still lacking and several important questions about the phylogenetic relationships within this group remain unsolved. To improve our understanding of these relationships, we constructed phylogenetic trees using the nucleotide sequences of the small-subunit rRNA (SSrRNA) gene and amino acid sequences of actin I and α-tubulin. Analyses of SSrRNA gene sequences indicated that: 1) the Sporadotrichida sensu Lynn (2008) and the Oxytrichidae are polyphyletic; 2) the Uroleptus species, which are classified to urostylids, formed a sister group with the oxytrichids; 3) Halteria grandinella, which is grouped morphologically with oligotrich species, clustered within the oxytrichids. These results are congruent with previous studies based on SSrRNA gene sequences. However, the amino acid sequences of actin I and α-tubulin yielded different topologies. The main results are: 1) in all phylogenetic trees, the genus Oxytricha was paraphyletic; 2) Uroleptus was sister to a subset of Urostyla and Holosticha, albeit with low supporting values; 3) Halteria grandinella was separated distantly from the Oxytrichidae in trees inferred from actin I amino acid sequences but clustered with oligotrichids in the α-tubulin analysis. The inconsistency among the trees inferred from these different molecular markers may be caused by rapidly accumulated genetic characterizations of ciliates. Further studies with additional molecular markers and sampling of more taxa are expected to better address the relationships among sporadotrichids.

  13. Natural products from aquatic eukaryotic microorganisms for cancer therapy: Perspectives on anti-tumour properties of ciliate bioactive molecules.

    Science.gov (United States)

    Catalani, Elisabetta; Proietti Serafini, Francesca; Zecchini, Silvia; Picchietti, Simona; Fausto, Anna Maria; Marcantoni, Enrico; Buonanno, Federico; Ortenzi, Claudio; Perrotta, Cristiana; Cervia, Davide

    2016-11-01

    Several modern drugs, including those for cancer therapy, have been isolated from natural sources, are based on natural products and its derivatives, or mime natural products. Some of them are in clinical use, others in clinical trials. The success of natural products in drug discovery is related to their biochemical characteristics and to the technologic methods used to study their feature. Natural compounds may acts as chemo-preventive agents and as factors that increase therapeutic efficacy of existing drugs, thus overcoming cancer cell drug resistance that is the main factor determining the failure in conventional chemotherapy. Water environment, because of its physical and chemical conditions, shows an extraordinary collection of natural biological substances with an extensive structural and functional diversity. The isolation of bioactive molecules has been reported from a great variety of aquatic organisms; however, the therapeutic application of molecules from eukaryotic microorganisms remains inadequately investigated and underexploited on a systematic basis. Herein we describe the biological activities in mammalian cells of selected substances isolated from ciliates, free-living protozoa common almost everywhere there is water, focusing on their anti-tumour actions and their possible therapeutic activity. In particular, we unveil the cellular and molecular machine mediating the effects of cell type-specific signalling protein pheromone Er-1 and secondary metabolites, i.e. euplotin C and climacostol, in cancer cells. To support the feasibility of climacostol-based approaches, we also present novel findings and report additional mechanisms of action using both in vitro and in vivo models of mouse melanomas, with the scope of highlighting new frontiers that can be explored also in a therapeutic perspective. The high skeletal chemical difference of ciliate compounds, their sustainability and availability, also through the use of new organic synthesis

  14. Impacts of an uncontrolled phosphogypsum dumpsite on summer distribution of phytoplankton, copepods and ciliates in relation to abiotic variables along the near-shore of the southwestern Mediterranean coast.

    Science.gov (United States)

    Rekik, Amira; Drira, Zaher; Guermazi, Wassim; Elloumi, Jannet; Maalej, Sami; Aleya, Lotfi; Ayadi, Habib

    2012-02-01

    In connection with the Taparura Project, studies of spatial distribution of the crustacean zooplankton community, nutrients, phytoplankton and ciliates were conducted in July 2007 at 45 stations spread over fifteen transects along the coast north of Sfax. The results showed that the N/P ratio was lower than the Redfield ratio, suggesting potential N limitation. Phytoplankton was characterised by the proliferation of several diatoms, while ciliates were largely dominated by spirotrichs. Copepods were the most abundant zooplankton present during the entire study period, comprising 61% of the total zooplankton community. Twelve copepod families were identified at every station, with a high percentage of Oithonidae (77% of copepods) dominated by Oithona nana. The abundance of this species was correlated with that of diatoms, Cocoolithophorideae and ciliated Colpodea, suggesting that O. nana may feed on a wide range of prey. Despite human pressure and industrial activities, the coastal waters north of Sfax showed a wide diversity of phytoplankton, ciliates and zooplankton.

  15. ORTHOIMAGERY, Santa Clara, CA

    Data.gov (United States)

    Federal Emergency Management Agency, Department of Homeland Security — Digital orthographic imagery datasets contain georeferenced images of the Earth's surface, collected by a sensor in which object displacement has been removed for...

  16. Santa Clara County, California

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — LAS format files, raw LiDAR data in its native format, classified bare-earth LiDAR DEM and photogrammetrically derived breaklines generated from LiDAR Intensity...

  17. Vigilancia y control en criaderos temporales y permanentes de culícidos en Villa Clara (Vigilance and control in temporal and permanent breeding ground of mosquitoes in Villa Clara

    Directory of Open Access Journals (Sweden)

    Janhad L. Rodríguez Mendieta

    2006-07-01

    Full Text Available El trabajo se desarrolló en la Unidad Provincial de Vigilancia y Lucha Antivectorial de la provincia de Villa Clara, en el período comprendido entre el primero de julio al primero de noviembre del 2005. Para el mismo se representaron gráficamente los 304 criaderos permanentes y 218 temporales de culícidos; distribuidos en los 13 municipios de dicha provincia. Se tomaron muestras de cuerpos de agua (28 criaderos existentes en los 13 municipios de la provincia para detectar la Densidad Larvaria según la metodología del cucharón. Se determinaron las principales especies de culícidos que habitan en la provincia y se compararon dos métodos (Temephos al 2% y peces de control para estos vectores, determinándose el costo – riesgo del Temephos al 2%, el Bacillus thurigiensis y los peces como métodos de control de mosquitos mediante una ponderización. Los datos primarios se procesaron en el sistema computarizado Excel del paquete Office XP y para el procesamiento estadístico de la efectividad de cada tratamiento se empleó la prueba de comparación de proporciones del paquete Statgraphics plus 4.1, ambos sistemas sustentados en WindowsÒ. Los resultados muestran que las especies de mosquitos más difundidas en la provincia son: el Anopheles albimanus, el Aedes mediovitatus, el Aedes scapularis, el Aedes confinis, el Culex quinquefasciatus, el Culex nigripalpus y el Culex corniger; además, los resultados demuestran la superioridad del control con peces sobre el control con Temephos ya que es más eficiente (99% versus 87% para p < 0.01 en el control de culícidos. La vigilancia con peces (no gastos en divisas y $ 1 035.08 MN es más económica que el Temephos (847 500 CUC y $ 12 490.96 MN y que el Bacillus thurigiensis (6 328 cuc y $ 8 280.64 MN. Se concluye que los peces constituyen un efectivo control para las poblaciones de culícidos, recomendando el uso de los mismos por todos los beneficios que estos representan. This work was

  18. California GAMA Program: Sources and transport of nitrate in shallow groundwater in the Llagas Basin of Santa Clara County, California

    Energy Technology Data Exchange (ETDEWEB)

    Moran, J E; McNab, W; Esser, B; Hudson, G; Carle, S; Beller, H; Kane, S; Tompson, A B; Letain, T; Moore, K; Eaton, G; Leif, R; Moody-Bartel, C; Singleton, M

    2005-06-29

    A critical component of the State Water Resource Control Board's Groundwater Ambient Monitoring and Assessment (GAMA) Program is to assess the major threats to groundwater resources that supply drinking water to Californians (Belitz et al., 2004). Nitrate is the most pervasive and intractable contaminant in California groundwater and is the focus of special studies under the GAMA program. This report presents results of a study of nitrate contamination in the aquifer beneath the cities of Morgan Hill and Gilroy, CA, in the Llagas Subbasin of Santa Clara County, where high nitrate levels affect several hundred private domestic wells. The main objectives of the study are: (1) to identify the main source(s) of nitrate that issue a flux to the shallow regional aquifer (2) to determine whether denitrification plays a role in the fate of nitrate in the subbasin and (3) to assess the impact that a nitrate management plan implemented by the local water agency has had on the flux of nitrate to the regional aquifer. Analyses of 56 well water samples for major anions and cations, nitrogen and oxygen isotopes of nitrate, dissolved excess nitrogen, tritium and groundwater age, and trace organic compounds, show that synthetic fertilizer is the most likely source of nitrate in highly contaminated wells, and that denitrification is not a significant process in the fate of nitrate in the subbasin except in the area of recycled water application. In addition to identifying contaminant sources, these methods offer a deeper understanding of how the severity and extent of contamination are affected by hydrogeology and groundwater management practices. In the Llagas subbasin, the nitrate problem is amplified in the shallow aquifer because it is highly vulnerable with high vertical recharge rates and rapid lateral transport, but the deeper aquifers are relatively more protected by laterally extensive aquitards. Artificial recharge delivers low-nitrate water and provides a means of

  19. Analysis of seismic waves crossing the Santa Clara Valley using the three-component MUSIQUE array algorithm

    Science.gov (United States)

    Hobiger, Manuel; Cornou, Cécile; Bard, Pierre-Yves; Le Bihan, Nicolas; Imperatori, Walter

    2016-10-01

    We introduce the MUSIQUE algorithm and apply it to seismic wavefield recordings in California. The algorithm is designed to analyse seismic signals recorded by arrays of three-component seismic sensors. It is based on the MUSIC and the quaternion-MUSIC algorithms. In a first step, the MUSIC algorithm is applied in order to estimate the backazimuth and velocity of incident seismic waves and to discriminate between Love and possible Rayleigh waves. In a second step, the polarization parameters of possible Rayleigh waves are analysed using quaternion-MUSIC, distinguishing retrograde and prograde Rayleigh waves and determining their ellipticity. In this study, we apply the MUSIQUE algorithm to seismic wavefield recordings of the San Jose Dense Seismic Array. This array has been installed in 1999 in the Evergreen Basin, a sedimentary basin in the Eastern Santa Clara Valley. The analysis includes 22 regional earthquakes with epicentres between 40 and 600 km distant from the array and covering different backazimuths with respect to the array. The azimuthal distribution and the energy partition of the different surface wave types are analysed. Love waves dominate the wavefield for the vast majority of the events. For close events in the north, the wavefield is dominated by the first harmonic mode of Love waves, for farther events, the fundamental mode dominates. The energy distribution is different for earthquakes occurring northwest and southeast of the array. In both cases, the waves crossing the array are mostly arriving from the respective hemicycle. However, scattered Love waves arriving from the south can be seen for all earthquakes. Combining the information of all events, it is possible to retrieve the Love wave dispersion curves of the fundamental and the first harmonic mode. The particle motion of the fundamental mode of Rayleigh waves is retrograde and for the first harmonic mode, it is prograde. For both modes, we can also retrieve dispersion and ellipticity

  20. Geologic map of the Hayward fault zone, Contra Costa, Alameda, and Santa Clara counties, California: a digital database

    Science.gov (United States)

    Graymer, R.W.; Jones, D.L.; Brabb, E.E.

    1995-01-01

    The Hayward is one of three major fault zones of the San Andreas system that have produced large historic earthquakes in the San Francisco Bay Area (the others being the San Andreas and Calaveras). Severe earthquakes were generated by this fault zone in 1836 and in 1868, and several large earthquakes have been recorded since 1868. The Hayward fault zone is considered to be the most probable source of a major earthquake in the San Francisco Bay Area, as much as 28% chance for a magnitude 7 earthquake before the year 2021 (Working Group on California Earthquake Probabilities, 1990). The Hayward fault zone, as described in this work, is a zone of highly deformed rocks, trending north 30 degrees west and ranging in width from about 2 to 10 kilometers. The historic earthquake generating activity has been concentrated in the western portion of the zone, but the zone as a whole reflects deformation derived from oblique right-lateral and compressive tectonic stress along a significant upper crustal discontinuity for the past 10 million or more years. The Hayward fault zone is bounded on the east by a series of faults that demarcate the beginning of one or more structural blocks containing rocks and structures unrelated to the Hayward fault zone. The eastern bounding faults are, from the south, the Calaveras, Stonybrook, Palomares, Miller Creek, and Moraga faults. These faults are not considered to be part of the Hayward fault zone, although they are shown on the map to demarcate its boundary. The western boundary of the zone is less clearly defined, because the alluvium of the San Francisco Bay and Santa Clara Valley basins obscures bedrock and structural relationships. Although several of the westernmost faults in the zone clearly project under or through the alluvium, the western boundary of the fault is generally considered to be the westernmost mapped fault, which corresponds more or less with the margin of thick unconsolidated surficial deposits. The Hayward fault

  1. Leonor de Sicilia y Santa Clara de Teruel: la fundación reginal de un convento de clarisas y su primer desarrollo

    Directory of Open Access Journals (Sweden)

    Roebert, Sebastian

    2014-06-01

    Full Text Available The history of the monastery of the Poor Clares of Teruel, also known as Santa Catalina or Santa Clara de Teruel, is virtually unknown. One reason for the lack of studies dedicated to this convent is the complete loss of its archive during the Spanish Civil War. The present study intends to reconstruct the foundation and initial development of Santa Clara de Teruel from its beginning in 1367 until the fi rst quarter of the 15th century, using mostly hitherto unknown sources from other archives. Special attention will be paid to the founder of the monastery, Leonor of Sicily (1349-1375, queen of the Crown of Aragon.La historia del monasterio de las clarisas de Teruel, conocido tanto por el nombre de Santa Catalina como por el de Santa Clara de Teruel, nos resulta hasta el día de hoy prácticamente desconocida. Seguramente, este hecho se debe en buena medida a la destrucción completa del archivo conventual durante la Guerra Civil. El presente estudio pretende reconstruir el proceso fundacional y analizar el primer desarrollo del monasterio, desde su creación en el año 1367 hasta el primer cuarto del siglo XV, a través de la documentación que se conserva en otros archivos y que permanece, en su mayor parte, inédita y sin estudiar. Además, se investigará el papel preponderante que desempeñó la fundadora y principal promotora del convento, Leonor de Sicilia (1349-1375, reina de la Corona de Aragón.

  2. Radionuclides and heavy metals in rainbow trout from Tsichomo, Nana Ka, Wen Povi, and Pin De Lakes in Santa Clara Canyon

    Energy Technology Data Exchange (ETDEWEB)

    Fresquez, P.R.; Armstrong, D.R.; Naranjo, L. Jr.

    1998-04-01

    Radionuclide ({sup 3}H, {sup 90}Sr, {sup 137}Cs, {sup 238}Pu, {sup 239}Pu, and total uranium) and heavy metal (Ag, As, Ba, Be, Cd, Cr, Hg, Ni, Pb, Sb, Se, and TI) concentrations were determined in rainbow trout collected from Tsichomo, Nana Ka, Wen Povi, and Pin De lakes in Santa Clara Canyon in 1997. Most radionuclide and heavy metal concentrations in fish collected from these four lakes were within or just above upper limit background concentrations (Abiquiu reservoir), and as a group were statistically (p < 0.05) similar in most parameters to background.

  3. ANÁLISIS ESPACIAL DE LA MORBIMORTALIDAD DEL CÁNCER DE MAMAY CÉRVIX. VILLA CLARA. CUBA. 2004-2009

    OpenAIRE

    Norma E. Batista Hernández; Milagros Alegret Rodriguez; Oscar Antón Fleites

    2013-01-01

    Fundamentos: El cáncer de mama y el de cérvix continúan siendo un problema de salud, a pesar de la existencia de programas de prevención y de diagnóstico precoz. Por no existir en nuestra provincia estudios similares, se decidió realizar esta investigación, con el objetivo de identificar conglomerados espaciales y/o espacio-temporales que permitan el análisis de la morbimortalidad por cáncer de mama y cérvix en la provincia Villa Clara. Métodos: Estudio observacional descriptivo, focalizado e...

  4. Manejo de desechos orgánicos del hogar y las escuelas en las comunidades de Santa Clara y Cuestillas de Florencia

    OpenAIRE

    Gadea-Rivas, Arnoldo; Elizondo-Solís, Jorge Mario; González-Jiménez, Hermer

    2012-01-01

    Proyecto de Investigación código 5402-2151-5301 El papel y los residuos orgánicos de cocina son la mayoría de los desechos generados en hogares rurales. Este proyecto propuso opciones para el manejo de esos desechos de escuelas y hogares en Santa Clara y Cuestillas de Florencia, ambas comunidades aledañas a la Sede Regional del Instituto Tecnológico de Costa Rica. Por medio de charlas y visitas al Relleno Municipal de San Carlos, los niños aprendieron sobre el manejo de los desechos sól...

  5. El sistema lacustre de la Formación Mollar en el depocentro triásico de Santa Clara (provincia de Mendoza, Argentina)

    OpenAIRE

    Luis A. Spalletti; Zavattieri,Ana María

    2009-01-01

    El depocentro triásico de Santa Clara, Cuenca Cuyana, se caracteriza por espesos depósitos generados en ambiente lacustre. Uno de ellos, con un registro de más de 345 m, corresponde a la Formación Mollar. El tramo inferior a medio está caracterizado por una monótona sucesión de lutitas bituminosas acumuladas por decantación suspensiva en el 'off shore' anóxico de un cuerpo lacustre hidrológicamente cerrado y que muestra alto contenido de materia orgánica amorfa de origen algal y de restos de ...

  6. Estudio clínico, epidemiológico y etiopatogénico de las cardiopatías congénitas en Villa Clara

    OpenAIRE

    Navarro Ruíz, Maribel

    2014-01-01

    Se realizó una investigación con el objetivo de caracterizar la prevalencia, el comportamiento clínico y la supervivencia de las cardiopatías congénitas así como variables epidemiológicas de riesgo asociadas, con un alcance preventivo, entre 2000 y 2008 en Villa Clara. La muestra para el estudio clínico fue de 371 productos nacidos vivos con una cardiopatía congénita diagnosticada antes de los 28 días, nacidos muertos, abortos espontáneos e interrupciones de la gestación de causa genética....

  7. [Morphological variations of the nuclear apparatus of astome ciliates Almophrya bivacuolata and A. maediovacuolata (protozoa: ciliophora) endocommensal of terricolous oligochaetes in Cameroon].

    Science.gov (United States)

    Nana, P A; Ngassam, P; Fokam, Z; Bricheux, G; Bouchard, P; Coffe, G; Sime, Gando T; Zébazé, Togouet S H

    2010-12-01

    The silver impregnation supplemented by DAPI and Feulgen nuclear coloration enabled us to study the morphological variations of the nuclear apparatus of two species of endocommensal Astome ciliates, Almophrya bivacuoloata (de Puytorac & Dragesco, 1968) and A. mediovocuolata (Ngassam, 1983). We highlighted important digitations and the presence of dark bands in the structure of the "H" macronucleus of the small cellular types as well as the presence of intermediate forms between "H" and "X" in these two species.

  8. Can a fermentation gas mainly produced by rumen Isotrichidae ciliates be a potential source of biohydrogen and a fuel for a chemical fuel cell?

    Science.gov (United States)

    Piela, Piotr; Michałowski, Tadeusz; Miltko, Renata; Szewczyk, Krzysztof; Sikora, Radosław; Grzesiuk, Elzbieta; Sikora, Anna

    2010-07-01

    Bacteria, fungi and protozoa inhabiting the rumen, the largest chamber of the ruminants' stomach, release large quantities of hydrogen during the fermentation of carbohydrates. The hydrogen is used by coexisting methanogens to produce methane in energy-yielding processes. This work shows, for the first time, a fundamental possibility of using a hydrogen-rich fermentation gas produced by selected rumen ciliates to feed a low-temperature hydrogen fuel cell. A biohydrogen fuel cell (BHFC) was constructed consisting of (i) a bioreactor, in which a hydrogen-rich gas was produced from glucose by rumen ciliates, mainly of the Isotrichidae family, deprived of intra- and extracellular bacteria, methanogens, and fungi, and (ii) a chemical fuel cell of the polymer-electrolyte type (PEFC). The fuel cell was used as a tester of the technical applicability of the fermentation gas produced by the rumen ciliates for power generation. The average estimated hydrogen yield was ca. 1.15 mol H2 per mol of fermented glucose. The BHFC performance was equal to the performance of the PEFC running on pure hydrogen. No fuel cell poisoning effects were detected. A maximum power density of 1.66 kW/m2 (PEFC geometric area) was obtained at room temperature. The maximum volumetric power density was 128 W/m3 but the coulombic efficiency was only ca. 3.8%. The configuration of the bioreactor limited the continuous operation time of this BHFC to ca. 14 hours.

  9. Morphogenesis of respiratory syncytial virus in human primary nasal ciliated epithelial cells occurs at surface membrane microdomains that are distinct from cilia

    Energy Technology Data Exchange (ETDEWEB)

    Jumat, Muhammad Raihan [School of Biological Sciences, Nanyang Technological University, 60 Nanyang Drive, Singapore 637551 (Singapore); Yan, Yan [Department of Otolaryngology, Yong Loo Lin School of Medicine, National University Health System, National University of Singapore, Singapore 119228 (Singapore); Ravi, Laxmi Iyer [School of Biological Sciences, Nanyang Technological University, 60 Nanyang Drive, Singapore 637551 (Singapore); Wong, Puisan [Detection and Diagnostics Laboratory, DSO National Laboratories, 27 Medical Drive, Singapore 117510 (Singapore); Huong, Tra Nguyen [School of Biological Sciences, Nanyang Technological University, 60 Nanyang Drive, Singapore 637551 (Singapore); Li, Chunwei [Department of Otolaryngology, Yong Loo Lin School of Medicine, National University Health System, National University of Singapore, Singapore 119228 (Singapore); Tan, Boon Huan [Detection and Diagnostics Laboratory, DSO National Laboratories, 27 Medical Drive, Singapore 117510 (Singapore); Wang, De Yun [Department of Otolaryngology, Yong Loo Lin School of Medicine, National University Health System, National University of Singapore, Singapore 119228 (Singapore); Sugrue, Richard J., E-mail: rjsugrue@ntu.edu.sg [School of Biological Sciences, Nanyang Technological University, 60 Nanyang Drive, Singapore 637551 (Singapore)

    2015-10-15

    The distribution of cilia and the respiratory syncytial virus (RSV) nucleocapsid (N) protein, fusion (F) protein, attachment (G) protein, and M2-1 protein in human ciliated nasal epithelial cells was examined at between 1 and 5 days post-infection (dpi). All virus structural proteins were localized at cell surface projections that were distinct from cilia. The F protein was also trafficked into the cilia, and while its presence increased as the infection proceeded, the N protein was not detected in the cilia at any time of infection. The presence of the F protein in the cilia correlated with cellular changes in the cilia and reduced cilia function. At 5 dpi extensive cilia loss and further reduced cilia function was noted. These data suggested that although RSV morphogenesis occurs at non-cilia locations on ciliated nasal epithelial cells, RSV infection induces changes in the cilia body that leads to extensive cilia loss. - Highlights: • Respiratory syncytial virus (RSV) infects nasal ciliated epithelial cells. • Virus morphogenesis occurs within filamentous projections distinct from cilia. • The RSV N protein was not detected in the cilia at any time during infection. • Trafficking of the F protein into the cilia occurred early in infection. • Presence of the F protein in cilia correlated with impaired cilia function.

  10. Impacts of restoration of an uncontrolled phosphogypsum dumpsite on the seasonal distribution of abiotic variables, phytoplankton, copepods, and ciliates in a man-made solar saltern.

    Science.gov (United States)

    Kobbi-Rebai, Rayda; Annabi-Trabelsi, Neila; Khemakhem, Hajer; Ayadi, Habib; Aleya, Lotfi

    2013-03-01

    The restoration of an uncontrolled phosphogypsum landfill was investigated for its effects on the seasonal distribution of phytoplankton, ciliates, and copepods. Sampling was carried out monthly from September 2007 to August 2008 at four ponds of increasing salinity (A1, 41 psu; A5, 46 psu; A16, 67 psu; and C31, 77 psu) in the Sfax solar saltern (southeastern Tunisia). Physicochemical and biological analyses were carried out using standard methods. Results showed drastic reduction of phosphate input and greater diversity of phytoplankton, ciliates, and copepods than before restoration. Pennate diatoms and new ciliates, considered bio-indicators of less-stressed marine ecosystems, proliferated in the A1 pond for the first time after restoration. Copepods appeared to feed on a wide range of prey. Economically, removal of the 1.7 million m(3) of phosphate improved the quality of the site's salt production, enabling the salt company to receive the quality ISO 9001 accreditation.

  11. p172: An alveolar type II and Clara cell specific protein with late developmental expression and upregulation by hyperoxic lung injury.

    Science.gov (United States)

    Girod, C E; Shin, D H; Hershenson, M B; Solway, J; Dahl, R; Miller, Y E

    1996-06-01

    The epithelium of the alveolus and distal airway meets unique requirements, functioning as a gas exchange membrane and barrier to alveolar flooding by vascular contents as well as to bloodstream contamination by airborne toxins and pathogens. Gene products specifically expressed by this epithelium, notably the surfactant apoproteins, have had important clinical application. No cell surface antigen specific for alveolar type II and Clara cells has been described. We report the biochemical characterization, tissue and developmental expression, and upregulation by injury of a 172 kD protein recognized by a monoclonal antibody, 3F9, synthesized in response to immunization with freshly isolated rat alveolar type II cells. p172 is expressed in a polarized fashion by the apical surface of rat alveolar type II and Clara cells. An immunohistochemical survey of various rat tissues and organs reveals lung specificity. p172 is first detectable in rare epithelial cells at 19 days of gestation, a time when the fully differentiated alveolar type II cell is identified by the first detection of lamellar bodies. There is a dramatic increase in p172 expression just prior to birth. Hyperoxic lung injury results in increased expression of p172. The upregulation of p172 by hyperoxia and its cell-specific expression suggests an important adaptive function.

  12. CARACTERIZACIÓN DE LA ACCIDENTALIDAD VEHICULAR Y ANÁLISIS DE LAS CAUSAS EN LA PROVINCIA DE VILLA CLARA, CUBA

    Directory of Open Access Journals (Sweden)

    RENÉ A. GARCÍA DEPESTRE

    2012-01-01

    Full Text Available La investigación que se presenta tiene como objeto de estudio las carreteras rurales de interés nacional en la provincia de Villa Clara, localizada en la región central de Cuba, con el propósito de analizar la seguridad vial en los tramos que componen dicha red. Se realiza la caracterización de la accidentalidad vehicular, mediante un procedimiento que contempla cinco aspectos e incluye la determinación de un orden de peligrosidad. Además, se determina la influencia de cada uno de los elementos componentes del sistema de seguridad vial en la accidentalidad y su interrelación. El área de estudio es la provincia de Villa Clara, para la cual se particulariza en el aporte a la inseguridad vial, de los elementos relativos a la carretera, a partir del análisis de los modelos de reportes de accidentes de tránsito en tres momentos, contribuyendo de esta forma con la propuesta medidas, regulaciones o acciones de conservación a favor de la disminución de los accidentes de tránsito, como resultado de un mayor conocimiento de sus causas.

  13. Estudio de la resistencia a compresión simple del adobe elaborado con suelos procedentes de Crescencio Valdés, Villa Clara, Cuba

    Directory of Open Access Journals (Sweden)

    Barroso, I. J.

    2008-09-01

    Full Text Available In this article we study the resistance to simple compression of the adobe bricks with building purposes. The study was carried out with various clay soils from Crescencio Valdés village, municipality of Camajuaní, Villa Clara, Cuba. In order to select the best soils to construction we have considered 1 MPa (10 kg/cm2 as minimum resistance to simple compression. So the soils that do not verify that requirement have been improved only by adding sand.En este artículo se estudia la resistencia a compresión simple que presenta el adobe elaborado con diferentes suelos procedentes del pueblo de Crescencio Valdés, situado en el municipio de Camajuaní, Villa Clara, Cuba. Se valora la idoneidad de la utilización de cada suelo estudiado bajo la premisa de alcanzar con el adobe elaborado una resistencia a compresión simple de 1 MPa (10 kg/cm2, ya que dicho adobe será utilizado posteriormente para edificación en dicho pueblo

  14. Geología y registros magnéticos entre arroyo La Tapera y Santa Clara del Mar, Mar del Plata

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    J.C. Bidegain

    2005-09-01

    Full Text Available Estudios paleomagnéticos se realizaron en secuencias del Pleistoceno-Holoceno del sector comprendido entre el arroyo La Tapera y Santa Clara del Mar, en Mar del Plata. Los sedimentos de la base de los perfiles en el arroyo La Tapera y en Camet, que se interpreta pertenecen a la Formación Ensenada, contienen direcciones de polaridad reversa y se asignan al cron Matuyama. Las capas sedimentarias de la base del perfil de Santa Clara del Mar, solo presentan direcciones de polaridad normal, por consiguiente toda la secuencia sedimentaria de esta localidad se asigna al cron Brunhes, (< 0,78 Ma. Los registros de susceptibilidad magnética siguen el patrón de los perfiles realizados en el plateau de loess de Argentina. Los valores más bajos de susceptibilidad corresponden a mayor grado de pedogénesis y meteorización más intensa. Las titanomagnetitas acarreadas por el viento en los períodos glaciares (más secos, son las portadoras principales de la remanencia y responden por los registros magnéticos más elevados que se obtienen en las capas menos meteorizadas.

  15. Ground-Water Quality Data in the Santa Clara River Valley Study Unit, 2007: Results from the California GAMA Program

    Science.gov (United States)

    Montrella, Joseph; Belitz, Kenneth

    2009-01-01

    Ground-water quality in the approximately 460-square-mile Santa Clara River Valley study unit (SCRV) was investigated from April to June 2007 as part of the statewide Priority Basin project of the Ground-Water Ambient Monitoring and Assessment (GAMA) Program. The GAMA Priority Basin project was developed in response to the Groundwater Quality Monitoring Act of 2001 and is being conducted by the U.S. Geological Survey (USGS) in cooperation with the California State Water Resources Control Board (SWRCB). The study was designed to provide a spatially unbiased assessment of the quality of raw ground water used for public water supplies within SCRV, and to facilitate a statistically consistent basis for comparing water quality throughout California. Fifty-seven ground-water samples were collected from 53 wells in Ventura and Los Angeles Counties. Forty-two wells were selected using a randomized grid-based method to provide statistical representation of the study area (grid wells). Eleven wells (understanding wells) were selected to further evaluate water chemistry in particular parts of the study area, and four depth-dependent ground-water samples were collected from one of the eleven understanding wells to help understand the relation between water chemistry and depth. The ground-water samples were analyzed for a large number of synthetic organic constituents (volatile organic compounds [VOC], pesticides and pesticide degradates, potential wastewater-indicator compounds, and pharmaceutical compounds), a constituent of special interest (perchlorate), naturally occurring inorganic constituents (nutrients, major and minor ions, and trace elements), radioactive constituents, and microbial constituents. Naturally occurring isotopes (tritium, carbon-13, carbon-14 [abundance], stable isotopes of hydrogen and oxygen in water, stable isotopes of nitrogen and oxygen in nitrate, chlorine-37, and bromine-81), and dissolved noble gases also were measured to help identify the source

  16. Infraciliature and morphogenesis in three rumen Diplodinium ciliates, Diplodinium polygonale, Diplodinium leche, and Diplodinium nanum, observed by light microscopy.

    Science.gov (United States)

    Ito, Akira; Imai, Soichi

    2005-01-01

    Infraciliature and morphogenesis of three rumen ophryoscolecid ciliates, Diplodinium polygonale Dogiel, 1925, Diplodinium leche Imai et al., 1992, and Diplodinium nanum Imai, 1988, are described from pyridinated silver carbonate-impregnated specimens. These three species have two polybrachykineties in the buccal area and a polybrachykinety in the dorsal ciliary zone. The vestibular polybrachykinety (VP) of D. polygonale and D. leche arises from the dorsal extremity of the adoral polybrachykinety (AP) as in Entodinium species, extending toward the left in D. polygonale and toward the left posterior in D. leche. The VP of D. nanum arises from the inner side of the AP, separate from its dorsal extremity, as in other Diplodinium species and extends toward the left posterior. These series of the polybrachykinety arrangements in D. polygonale, D. leche, and D. nanum can be regarded as transitional forms in the evolution of an Entodinium-like ancestor to Diplodinium. Morphogenesis of these three Diplodinium species is not different from that of other Diplodinium species.

  17. A P450 gene associated with robust resistance to DDT in ciliated protozoan, Tetrahymena thermophila by efficient degradation.

    Science.gov (United States)

    Feng, Lifang; Fu, Chengjie; Yuan, Dongxia; Miao, Wei

    2014-04-01

    Analysis of metabolic mechanisms of dichlorodiphenyltrichloroethane (DDT) accumulation and degradation in microorganisms, which could be used to reduce its hazard to higher organisms at the higher in the food chain, have not been investigated. Robust resistance to DDT (grows well in 256 mg/L DDT) and a surprising ability to degrade DDT (more than 70% DDT within 4h) were found in the ciliated protozoan Tetrahymena thermophila. A P450 gene (CYP5013C2) was found to respond specifically to DDT treatment. In the presence of 256 mg/L DDT, cells with overexpressing CYP5013C2 (p450-OE) grew faster and degraded DDT more efficiently than wild-type (WT) cells, while cells with CYP5013C2 partially knocked down (p450-KD) grew slower and exhibited reduced ability to degrade DDT compared to WT cells. Both dichlorodiphenyldichloroethylene (DDE) and dichlorodiphenyldichloroethane (DDD) were detected in cells after exposure to DDT, and the concentration of DDD in the p450-OE strain gradually decreased from 0.5 to 4h. Thus, we argue that this P450 gene (CYP5013C2), by efficiently degrading DDT to DDD, is associated with robust resistance to DDT in Tetrahymena, and that a strain overexpressing this gene has the potential to serve as bioreactor that degrades environmental DDT.

  18. Estimation of divergence times in litostomatean ciliates (Ciliophora: Intramacronucleata), using Bayesian relaxed clock and 18S rRNA gene.

    Science.gov (United States)

    Vďačný, Peter

    2015-08-01

    The class Litostomatea comprises a diverse assemblage of free-living and endosymbiotic ciliates. To understand diversification dynamic of litostomateans, divergence times of their main groups were estimated with the Bayesian molecular dating, a technique allowing relaxation of molecular clock and incorporation of flexible calibration points. The class Litostomatea very likely emerged during the Cryogenian around 680 Mya. The origin of the subclass Rhynchostomatia is dated to about 415 Mya, while that of the subclass Haptoria to about 654 Mya. The order Pleurostomatida, emerging about 556 Mya, was recognized as the oldest group within the subclass Haptoria. The order Spathidiida appeared in the Paleozoic about 442 Mya. The three remaining haptorian orders evolved in the Paleozoic/Mesozoic periods: Didiniida about 419 Mya, Lacrymariida about 269 Mya, and Haptorida about 194 Mya. The subclass Trichostomatia originated from a spathidiid ancestor in the Mesozoic about 260 Mya. A further goal of this study was to investigate the impact of various settings on posterior divergence time estimates. The root placement and tree topology as well as the priors of the rate-drift model, birth-death process and nucleotide substitution rate, had no significant effect on calculation of posterior divergence time estimates. However, removal of calibration points could significantly change time estimates at some nodes.

  19. Morphology and morphogenesis of a new marine cyrtophorid ciliate, Hartmannula sinica nov. spec. (Protozoa, Ciliophora, Cyrtophorida) from China.

    Science.gov (United States)

    Shao, Chen; Song, Weibo; Gong, Jun

    2008-02-01

    The living morphology, infraciliature and morphogenesis of a new marine cyrtophorid ciliate, Hartmannula sinica nov. spec., collected from Qingdao, north China, have been investigated. The new species is characterized by: size in vivo 90-130 x 40-50 microm, body long elliptical in outline, cilium-free field covered with a conspicuous alveolar layer; 24-31 ventral kineties, the rightmost 6-9 of which extend apically; 20-24 nematodesmal rods; about 15 sparsely distributed contractile vacuoles; a yellowish pigment spot is always present near the anterior tip of the cell. Morphogenetic events exhibit a pattern, which is homologous with that of related cyrtophorids. The main features are as follows: (1) preoral and circumoral kineties of opisthe develop from the oral primordium that forms in mid-body from sections of 3 postoral kineties, while parental preoral and circumoral kineties are retained; (2) parental cytostome and nematodesmal rods are resorbed in middle divisional stages and then replaced by newly formed structures; (3) the heteromerous macronucleus unifies in the late divisional stage.

  20. Morphology, ontogeny and molecular phylogeny of a novel saline soil ciliate, Urosomoida paragiliformis n. sp. (Ciliophora, Hypotrichia).

    Science.gov (United States)

    Wang, Jingyi; Lyu, Zhao; Warren, Alan; Wang, Feng; Shao, Chen

    2016-10-01

    The living morphology, infraciliature and morphogenesis of a new ciliate, Urosomoida paragiliformis n. sp., collected from saline soil in Weinan, China, were studied in vivo and after protargol staining. Urosomoida paragiliformis n. sp. is characterized as follows: body elongate-elliptical with no tail, flexible and slightly contractile; cortical granules dark-brown, 0.5μm across, arranged in short irregular rows; about 33 adoral membranelles; 14 frontoventral-transverse cirri; right and left marginal rows not confluent posteriorly; two macronuclear nodules. Morphogenesis of U. paragiliformis n. sp. corresponds well with that of other Urosomoida-species except that in reorganisers the oral primordium develops membranelles that replace those at the proximal end of the old adoral zone, whereas in dividers the entire parental adoral zone of membranelles is inherited by the proter. Phylogenetic analyses based on SSU rDNA sequence data suggest a close relationship between U. paragiliformis n. sp. and Paraurosomoida indiensis. A new combination is made: Oxytrichella subtropica (Fan et al., 2015) comb. nov. (basionym Urosomoida subtropica).

  1. Tissue mortality by Caribbean ciliate infection and white band disease in three reef-building coral species.

    Science.gov (United States)

    Verde, Alejandra; Bastidas, Carolina; Croquer, Aldo

    2016-01-01

    Caribbean ciliate infection (CCI) and white band disease (WBD) are diseases that affect a multitude of coral hosts and are associated with rapid rates of tissue losses, thus contributing to declining coral cover in Caribbean reefs. In this study we compared tissue mortality rates associated to CCI in three species of corals with different growth forms: Orbicella faveolata (massive-boulder), O. annularis (massive-columnar) and Acropora cervicornis (branching). We also compared mortality rates in colonies of A. cervicornis bearing WBD and CCI. The study was conducted at two locations in Los Roques Archipelago National Park between April 2012 and March 2013. In A. cervicornis, the rate of tissue loss was similar between WBD (0.8 ± 1 mm/day, mean ± SD) and CCI (0.7 ± 0.9 mm/day). However, mortality rate by CCI in A. cervicornis was faster than in the massive species O. faveolata (0.5 ± 0.6 mm/day) and O. annularis (0.3 ± 0.3 mm/day). Tissue regeneration was at least fifteen times slower than the mortality rates for both diseases regardless of coral species. This is the first study providing coral tissue mortality and regeneration rates associated to CCI in colonies with massive morphologies, and it highlights the risks of further cover losses of the three most important reef-building species in the Caribbean.

  2. The water-born protein pheromones of the polar protozoan ciliate, Euplotes nobilii: Coding genes and molecular structures

    Science.gov (United States)

    Vallesi, Adriana; Alimenti, Claudio; Di Giuseppe, Graziano; Dini, Fernando; Pedrini, Bill; Wüthrich, Kurt; Luporini, Pierangelo

    2010-08-01

    The protozoan ciliate Euplotes nobilii found in Antarctic and Arctic coastal waters relies on secretion of water-soluble cell type-specific signal proteins (pheromones) to regulate its vegetative growth and sexual mating. For three of these psychrophilic pheromones we previously determined the three-dimensional structures by nuclear magnetic resonance (NMR) spectroscopy with protein solutions purified from the natural sources, which led to evidence that their adaptation to cold is primarily achieved by increased flexibility through an extension of regions free of regular secondary structures, and by increased exposure of negative charges on the protein surface. Then we cloned the coding genes of these E. nobilii pheromones from the transcriptionally active cell somatic nucleus (macronucleus) and characterized the full-length sequences. These sequences all contain an open reading frame of 252-285 nucleotides, which is specific for a cytoplasmic pheromone precursor that requires two proteolytic cleavages to remove a signal peptide and a pro segment before release of the mature protein into the extracellular environment. The 5‧ and 3‧ non-coding regions are two- to three-fold longer than the coding region and appear to be tightly conserved, probably in relation to the inclusion of intron sequences destined to be alternatively removed to play key regulatory roles in the mechanism of the pheromone gene expression.

  3. Tissue mortality by Caribbean ciliate infection and white band disease in three reef-building coral species

    Directory of Open Access Journals (Sweden)

    Alejandra Verde

    2016-07-01

    Full Text Available Caribbean ciliate infection (CCI and white band disease (WBD are diseases that affect a multitude of coral hosts and are associated with rapid rates of tissue losses, thus contributing to declining coral cover in Caribbean reefs. In this study we compared tissue mortality rates associated to CCI in three species of corals with different growth forms: Orbicella faveolata (massive-boulder, O. annularis (massive-columnar and Acropora cervicornis (branching. We also compared mortality rates in colonies of A. cervicornis bearing WBD and CCI. The study was conducted at two locations in Los Roques Archipelago National Park between April 2012 and March 2013. In A. cervicornis, the rate of tissue loss was similar between WBD (0.8 ± 1 mm/day, mean ± SD and CCI (0.7 ± 0.9 mm/day. However, mortality rate by CCI in A. cervicornis was faster than in the massive species O. faveolata (0.5 ± 0.6 mm/day and O. annularis (0.3 ± 0.3 mm/day. Tissue regeneration was at least fifteen times slower than the mortality rates for both diseases regardless of coral species. This is the first study providing coral tissue mortality and regeneration rates associated to CCI in colonies with massive morphologies, and it highlights the risks of further cover losses of the three most important reef-building species in the Caribbean.

  4. Notes on Two Marine Ciliates from the Yellow Sea, China: Placus salinus and Strombidium apolatum (Protozoa, Ciliophora)

    Institute of Scientific and Technical Information of China (English)

    XU Dapeng; SONG Weibo; HU Xiaozhong

    2005-01-01

    The living morphology and infraciliature of two rare marine ciliates, Placus salinus Dietz, 1964 and Strombidium apolatum Wilbert and Song, 2005, collected from the coastal waters near Qingdao, China, were investigated by in vivo observation and protargol impregnation technique. The improved diagnosis for Placus salinus is as follows: medium-sized marine Placus, in vivo (50 -60) μm × (30 -40)μm; cell elliptical to barrel-shaped; 28 -31 somatic kineties; single macronucleus usually ellipsoid and one micronucleus located in the indention of the macronucleus; one contractile vacuole posteriorly positioned. Strombidium apolatum is characterized by: marine strombidium (40-60) μm × (30-45) μm in vivo, cordiform in shape with somewhat pointed posterior end and conspicuous apical protrusion; extrusomes prominent, about 15μm in length and evenly arranged along the circle kinety; about 16 collar and 5-6 buccal membranelles; one elongate macronucleus and one micronucleus; circle and ventral kineties consisting of about 53 and 45 dikinetids respectively.

  5. Morphology of four cyrtophorian ciliates (Protozoa, Ciliophora) from Yangtze Delta, China, with notes on the phylogeny of the genus Phascolodon.

    Science.gov (United States)

    Pan, Hongbo; Wang, Liqing; Jiang, Jiamei; Stoeck, Thorsten

    2016-10-01

    The morphology of four cyrtophorian ciliates, Dysteria ovalis, D. semilunaris, Phascolodon vorticella, and Chlamydonellopsis calkinsi, were investigated using living observation and protargol-staining. The morphology of D. ovalis is revealed in detail for the first time, and it is characterized by the following combination of features: size 40-50×20-30μm in vivo; oval in outline; four right kineties, including two frontoventral kineties and one shortened leftmost right kinety; three left frontal kineties; two ventrally located contractile vacuoles; marine habitat. New Chinese populations of three other species correspond well with previous descriptions, but a well-developed alveolar layer on the cell surface of P. vorticella is reported for the first time. Phylogenetic analyses based on small subunit rRNA gene sequences clustered Dysteria ovalis with Mirodysteria decora, whereas D. semilunaris is grouped with D. lanceolata. Although Phascolodon appeared as sister to Pseudochilodonopsis in the present work, its accurate phylogenetic position is still uncertain because AU test did not reject the possibility that it clustered with Odontochlamys and Chilodonella.

  6. Morphologic and Genetic Variability in the Marine Planktonic Ciliate Laboea strobila Lohmann, 1908 (Ciliophora, Oligotrichia), with Notes on its Ontogenesis

    Science.gov (United States)

    AGATHA, SABINE; STRÜDER-KYPKE, MICHAELA C.; BERAN, ALFRED

    2010-01-01

    Laboea strobila Lohmann, 1908 is a conspicuous oligotrich ciliate in the marine plankton. In order to compare different populations, the morphology of specimens from the Mediterranean Sea, North Sea, and Irish Sea was investigated using live observation, protargol impregnation, and scanning electron microscopy. Furthermore, the PCR-amplified products of the SSrRNA gene from a monoclonal culture of L. strobila from the Mediterranean Sea were sequenced and aligned with sequences of other oligotrichs, including a population of L. strobila from the Atlantic coast of the USA. Finally, the data from the ecological literature were summarized and the cultivation methods were described. The SSrRNA gene sequences of the two distantly located L. strobila populations from the North Atlantic are identical. Likewise, the morphometrics of most populations so far investigated after protargol impregnation (i.e. from the North Atlantic) do not show obvious differences. In all computed phylogenetic trees, L. strobila groups with Strombidium species, forming a monophyletic taxon corresponding to the subclass Oligotrichia. These results are corroborated by the ontogenetic comparison. Since no type species was fixed for Laboea Lohmann, 1908, L. strobila was designated in the present paper. PMID:15218695

  7. Primary and secondary siRNA synthesis triggered by RNAs from food bacteria in the ciliate Paramecium tetraurelia.

    Science.gov (United States)

    Carradec, Quentin; Götz, Ulrike; Arnaiz, Olivier; Pouch, Juliette; Simon, Martin; Meyer, Eric; Marker, Simone

    2015-02-18

    In various organisms, an efficient RNAi response can be triggered by feeding cells with bacteria producing double-stranded RNA (dsRNA) against an endogenous gene. However, the detailed mechanisms and natural functions of this pathway are not well understood in most cases. Here, we studied siRNA biogenesis from exogenous RNA and its genetic overlap with endogenous RNAi in the ciliate Paramecium tetraurelia by high-throughput sequencing. Using wild-type and mutant strains deficient for dsRNA feeding we found that high levels of primary siRNAs of both strands are processed from the ingested dsRNA trigger by the Dicer Dcr1, the RNA-dependent RNA polymerases Rdr1 and Rdr2 and other factors. We further show that this induces the synthesis of secondary siRNAs spreading along the entire endogenous mRNA, demonstrating the occurrence of both 3'-to-5' and 5'-to-3' transitivity for the first time in the SAR clade of eukaryotes (Stramenopiles, Alveolates, Rhizaria). Secondary siRNAs depend on Rdr2 and show a strong antisense bias; they are produced at much lower levels than primary siRNAs and hardly contribute to RNAi efficiency. We further provide evidence that the Paramecium RNAi machinery also processes single-stranded RNAs from its bacterial food, broadening the possible natural functions of exogenously induced RNAi in this organism.

  8. Several RNase T2 enzymes function in induced tRNA and rRNA turnover in the ciliate Tetrahymena

    DEFF Research Database (Denmark)

    Andersen, Kasper Langebjerg; Collins, Kathleen

    2012-01-01

    RNase T2 enzymes are produced by a wide range of organisms and have been implicated to function in diverse cellular processes, including stress-induced anticodon loop cleavage of mature tRNAs to generate tRNA halves. Here we describe a family of eight RNase T2 genes (RNT2A-RNT2H) in the ciliate...... Tetrahymena thermophila. We constructed strains lacking individual or combinations of these RNT2 genes that were viable but had distinct cellular and molecular phenotypes. In strains lacking only one Rnt2 protein or lacking a subfamily of three catalytically inactive Rnt2 proteins, starvation-induced tRNA...... fragments continued to accumulate, with only a minor change in fragment profile in one strain. We therefore generated strains lacking pairwise combinations of the top three candidates for Rnt2 tRNases. Each of these strains showed a distinct starvation-specific profile of tRNA and rRNA fragment accumulation...

  9. Un monestir a la cruïlla. Els inventaris de sagristia del monestir de Sant Antoni i Santa Clara de Barcelona (1389-1461

    Directory of Open Access Journals (Sweden)

    Jornet Benito, Núria

    2014-06-01

    Full Text Available The Monastery of Santa Clara and San Antonio in Barcelona was the first community of the Order of St. Clare in Catalonia. The present article reveals the wealth of its sacristy inventories as first-class historical sources. The study illustrates the special characteristics of the series of documents in the monastery’s archives: its authorship (by female sacristans as well as the main types of items inventoried and described (liturgical clothing and ornaments, jewelry, works of art, books .... The ensemble provides a rich perspective on female monastic culture with regard to its involvement in liturgy, sacred imagery and written culture. One of the outstanding results is an appreciation of the careful and detailed functional design applied by the community of nuns to each item, to keep track of time and the liturgical calendar, as well as to manage and live their relationship with the outside world.[ca] En el present article es posa al descobert la riquesa com a font històrica de primer ordre dels inventaris de sagristia del monestir de Sant Antoni i Santa Clara de Barcelona, primera comunitat de l’orde de Santa Clara en terres catalanes. L’estudi ens acosta a les particularitats d’aquesta sèrie documental en el seu fons arxivístic, la seva autoria (el càrrec de sagristana, així com a les principals tipologies de béns inventariats i descrits (parament i vestimenta litúrgica, orfebreria, obres d’art, llibres.... El conjunt permet donar una imatge rica de la cultura monàstica femenina, en l’acompanyament de la litúrgia, en la imatgeria sagrada, en la cultura escrita. Entre els resultats, sobresurt, la concepció funcional, curosa i detallada que la comunitat de germanes féu de cada peça, a l’hora de marcar el temps i el calendari litúrgic, com també a l’hora de gestionar i viure el dins/fora, la relació amb l’exterior.

  10. ANÁLISIS ESPACIAL DE LA MORBIMORTALIDAD DEL CÁNCER DE MAMAY CÉRVIX. VILLA CLARA. CUBA. 2004-2009

    Directory of Open Access Journals (Sweden)

    Norma E. Batista Hernández

    2013-01-01

    Full Text Available Fundamentos: El cáncer de mama y el de cérvix continúan siendo un problema de salud, a pesar de la existencia de programas de prevención y de diagnóstico precoz. Por no existir en nuestra provincia estudios similares, se decidió realizar esta investigación, con el objetivo de identificar conglomerados espaciales y/o espacio-temporales que permitan el análisis de la morbimortalidad por cáncer de mama y cérvix en la provincia Villa Clara. Métodos: Estudio observacional descriptivo, focalizado en la detección de conglomerados espaciales y espacio-temporales de la incidencia y mortalidad del cáncer de mama y cérvix en Villa Clara, utilizando la técnica estadística de exploración espacio-temporal (programa SatScan v .7.01. La muestra abarcó la totalidad de mujeres diagnosticadas durante el año 2004 y de ellas las fallecidas hasta el cierre del año 2009. Resultados: El cáncer de mama mostró concordancia en los resultados tanto espaciales como espacio-temporales con un riesgo de padecer la enfermedad de 1,63 y 1,91 respectivamente, los municipios que conformaron conglomerados significativos se ubicaron hacia el centro y noreste de la provincia, encabezados por Santa Clara, cabecera provincial. El cáncer de cérvix evidenció desde el punto de vista temporal el diagnóstico de 100 casos frente a 68,8 esperados durante los meses de marzo a julio del 2004. El estudio espacio-temporal mostró un conglomerado de incidencia en los municipios ubicados al noreste de la provincia. El riesgo relativo de presentar la enfermedad para las mujeres que vivían en estas zonas fue 3,46 frente a las del resto de la provincia. Conclusiones: Se mostró la presencia de conglomerados estadísticamente significativos tanto espaciales como espacio-temporales en las áreas de mayor riesgo de enfermar por estos cánceres. No hubo conglomerados de muertes y diagnósticos tardíos.

  11. UV Radiation and Visible Light Induce hsp70 Gene Expression in the Antarctic Psychrophilic Ciliate Euplotes focardii.

    Science.gov (United States)

    Fulgentini, Lorenzo; Passini, Valerio; Colombetti, Giuliano; Miceli, Cristina; La Terza, Antonietta; Marangoni, Roberto

    2015-08-01

    The psychrophilic ciliate Euplotes focardii inhabits the shallow marine coastal sediments of Antarctica, where, over millions of years of evolution, it has reached a strict molecular adaptation to such a constant-temperature environment (about -2 °C). This long evolution at sub-zero temperatures has made E. focardii unable to respond to heat stress with the activation of its heat shock protein (hsp) 70 genes. These genes can, however, be expressed in response to other stresses, like the oxidative one, thus indicating that the molecular adaptation has exclusively altered the heat stress signaling pathways, while it has preserved hsp70 gene activation in response to other environmental stressors. Since radiative stress has proved to be affine to oxidative stress in several organisms, we investigated the capability of UV radiation to induce hsp70 transcription. E. focardii cell cultures were exposed to several different irradiation regimes, ranging from visible only to a mixture of visible, UV-A and UV-B. The irradiation values of each spectral band have been set to be comparable with those recorded in a typical Antarctic spring. Using Northern blot analysis, we measured the expression level of hsp70 immediately after irradiation (0-h-labeled samples), 1 h, and 2 h from the end of the irradiation. Surprisingly, our results showed that besides UV radiation, the visible light was also able to induce hsp70 expression in E. focardii. Moreover, spectrophotometric measurements have revealed no detectable endogenous pigments in E. focardii, making it difficult to propose a possible explanation for the visible light induction of its hsp70 genes. Further research is needed to conclusively clarify this point.

  12. Near-Surface Structure and Velocities of the Northeastern Santa Cruz Mountains and the Western Santa Clara Valley, California, From Seismic Imaging

    Science.gov (United States)

    Catchings, R.D.; Gandhok, G.; Goldman, M.R.; Steedman, Clare

    2007-01-01

    Introduction The Santa Clara Valley (SCV) is located in the southern San Francisco Bay area of California and is bounded by the Santa Cruz Mountains to the southwest, the Diablo Ranges to the northeast, and the San Francisco Bay to the north (Fig. 1). The SCV, which includes the City of San Jose, numerous smaller cities, and much of the high-technology manufacturing and research area commonly referred to as the Silicon Valley, has a population in excess of 1.7 million people (2000 U. S. Census;http://quickfacts.census.gov/qfd/states/06/06085.html The SCV is situated between major active faults of the San Andreas Fault system, including the San Andreas Fault to the southwest and the Hayward and Calaveras faults to the northeast, and other faults inferred to lie beneath the alluvium of the SCV (CWDR, 1967; Bortugno et al., 1991). The importance of the SCV as a major industrial center, its large population, and its proximity to major earthquake faults are important considerations with respect to earthquake hazards and water-resource management. The fault-bounded alluvial aquifer system beneath the valley is the source of about one-third of the water supply for the metropolitan area (Hanson et al., 2004). To better address the earthquake hazards of the SCV, the U.S. Geological Survey (USGS) has undertaken a program to evaluate potential seismic sources, the effects of strong ground shaking, and stratigraphy associated with the regional aquifer system. As part of that program and to better understand water resources of the valley, the USGS and the Santa Clara Valley Water District (SCVWD) began joint studies to characterize the faults, stratigraphy, and structures beneath the SCV in the year 2000. Such features are important to both agencies because they directly influence the availability and management of groundwater resources in the valley, and they affect the severity and distribution of strong shaking from local and regional earthquakes sources that may affect

  13. Geo-environmental assessment of the city and municipality of Santa Clara for improving the health surveillance system Evaluación geoambiental de la ciudad y el municipio de Santa Clara, Cuba, para el perfeccionamiento del sistema de vigilancia de salud

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    Mabel Font Aranda

    2008-06-01

    Full Text Available This paper presents the results of the geo-environmental assessment of the city and municipality of Santa Clara, Cuba, developed with the purpose of determining and focusing on environmental health problems, and to propose preventive actions to minimize them. To accomplish the goal of contributing to improvement the Health Surveillance System the theoretical-methodological bases that justify the contribution of the geographical sciences to the solution of this problem have been developed. These approaches are implemented in the study case of Santa Clara, offering valuable information for the office of Municipal Public Health and the Municipal Unit of Hygiene and Epidemiology. Such results favor a rapid and opportune decision-making process in relation to risk factors with spatial and territorial dimension.El artículo expone los resultados de la evaluación geoambiental de la ciudad y el municipio de Santa Clara, Cuba, desarrollada con el propósito de determinar y focalizar problemas de salud ambiental, y proponer acciones preventivas para atenuarlos. Con el fin de contribuir al perfeccionamiento del Sistema de Vigilancia en Salud se desarrollan los fundamentos teóricometodológicos que justifican la contribución de las ciencias geográficas a la solución del problema y se implementan en el caso de estudio, aportando una valiosa información al Sectorial Municipal de Salud Pública y a la Unidad Municipal de Higiene y Epidemiología. La misma favorece la toma de decisiones rápidas y oportunas ante factores de riesgo en su dimensión espacial y territorial.  

  14. Development of a local-scale urban stream assessment method using benthic macroinvertebrates: An example from the Santa Clara Basin, California

    Science.gov (United States)

    Carter, J.L.; Purcell, A.H.; Fend, S.V.; Resh, V.H.

    2009-01-01

    Research that explores the biological response to urbanization on a site-specific scale is necessary for management of urban basins. Recent studies have proposed a method to characterize the biological response of benthic macroinvertebrates along an urban gradient for several climatic regions in the USA. Our study demonstrates how this general framework can be refined and applied on a smaller scale to an urbanized basin, the Santa Clara Basin (surrounding San Jose, California, USA). Eighty-four sampling sites on 14 streams in the Santa Clara Basin were used for assessing local stream conditions. First, an urban index composed of human population density, road density, and urban land cover was used to determine the extent of urbanization upstream from each sampling site. Second, a multimetric biological index was developed to characterize the response of macroinvertebrate assemblages along the urban gradient. The resulting biological index included metrics from 3 ecological categories: taxonomic composition ( Ephemeroptera, Plecoptera, and Trichoptera), functional feeding group (shredder richness), and habit ( clingers). The 90th-quantile regression line was used to define the best available biological conditions along the urban gradient, which we define as the predicted biological potential. This descriptor was then used to determine the relative condition of sites throughout the basin. Hierarchical partitioning of variance revealed that several site-specific variables (dissolved O2 and temperature) were significantly related to a site's deviation from its predicted biological potential. Spatial analysis of each site's deviation from its biological potential indicated geographic heterogeneity in the distribution of impaired sites. The presence and operation of local dams optimize water use, but modify natural flow regimes, which in turn influence stream habitat, dissolved O2, and temperature. Current dissolved O2 and temperature regimes deviate from natural

  15. Caballos de tracción de la Ciudad De Santa Clara, Cuba. II Algunos parámetros hematológicos (

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    Julio C. Castillo1, Omelio Cepero,1Reinaldo Quiñones,1

    2006-09-01

    Full Text Available Se realizó un estudio hematológico en100 caballos machos castradosseleccionados al azar utilizados en eltransporte local de pasajeros en laciudad de Santa Clara, Cuba. Lahemoglobina se determinó por latécnica de la ciano-metahemoglobinapor espectrofotometría, el volumenglobular agregado por la técnica delmicrohematocrito y el total de glóbulosblancos por recuento en la cámara deNeubauer. El 52% de los equinospresentaron valores de hemoglobinaentre 70 y 100 /L de sangre, lo que nospermite inferir que presentan un estadoanémico, lo que se corrobora por losvalores del hematocrito entre 0,25 y0,32 L/L en el 45% de los animales. Losvalores promedios de hemoglobina yhematocrito de 100 /L y 0.32 L/Lrespectivamente, coinciden con el límiteinferior de dichos valores reportados enla literatura para los equinos. Losequinos están sometidos a un trabajoexhaustivo y prolongado, que afecta elcorrecto funcionamiento de suorganismo.It was carried out a haematologicalstudy in 100 at random selectedcastrated male horses used in the localtransport of passengers in Santa ClaraCity, Cuba. The haemoglobin wasdetermined by cyanomethahaemoglobintechnique by meansof a spectrophotometer. The addedglobular volume and the total of whitecells were determined by the techniqueof micro haemathocrit and by countingin Neubauer’s chambers respectively.The 52% of the horses presentedhaemoglobin values between 70 and100 /L of blood, which allows us to inferthat they present an anemic state,which is corroborated by thehaemathocrit values between 0.25 and0.32 L/L in 45% of the animals. Theaverage values of haemoglobin andhaemathocrit of 100 g /L and 0.32 L/Lrespectively, coincides with the lowestlimit of these values reported in theliterature for horses. The horses aresubjected to an exhaustive and longwork that affects the correct of their

  16. PLANTAS UTILIZADAS EN ALIMENTACIÓN HUMANA POR AGRICULTORES MESTIZOS Y KICHWAS EN LOS CANTONES SANTA CLARA, MERA Y PASTAZA, PROVINCIA DE PASTAZA, ECUADOR

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    Ricardo V. Abril Saltos

    2016-01-01

    Full Text Available Esta investigación se realizó en la provincia de Pastaza, Ecuador, su objetivo fue identificar las principales especies vegetales utilizadas en alimentación humana, en las explotaciones agropecuarias de los cantones Pastaza, Mera y Santa Clara, comparando su frecuencia de reporte en función del cantón y etnia del productor, para lo cual se elaboró una encuesta, que consta de aspectos de identificación de los agricultores, plantas utilizadas en alimentación humana y sus formas de usos, la cual fue aplicada a 214 productores en la provincia, correspondiente al 30 % de productores identificados. A nivel global, se reportaron 59 especies, teniendo por cantón 32 especies en Pastaza, 16 en Mera y 56 en Santa Clara, en función de la etnia del productor se reportaron 44 especies utilizadas por mestizos y 46 especies utilizadas por Kichwas. Se obtuvo 33 familias botánicas, siendo Solanaceae y Arecaceae las que mayor número de especies reportan. El análisis de frecuencia de reportes, a través de cuadros de contingencia, con respecto al cantón y etnia del productor, presentó diferencias significativas en el valor de P para los estadísticos Chi cuadrado de Pearson y Chi cuadrado MV-G2. El análisis de comparación de proporciones mostró nueve especies, siendo las más destacadas Musa spSchott, Manihot esculenta Crantz L. y Colocasia esculenta (L.. Se concluye que en la zona existe diversidad en el uso de plantas para la alimentación humana, en la cual su variabilidad está influenciada por los componentes cantón y etnia del productor.

  17. Utilização do mecanismo de transposição de peixes da Usina Hidrelétrica Santa Clara por camarões (Palaemonidae), bacia do rio Mucuri, Minas Gerais, Brasil Use of Santa Clara Power Plant fish lift by Palaemonidae shrimps, Mucuri River basin, Minas Gerais, Brazil

    OpenAIRE

    Paulo dos S. Pompeu; Fábio Vieira; Carlos B. Martinez

    2006-01-01

    Durante a operação do elevador para peixes da Usina Hidrelétrica Santa Clara, de novembro de 2003 a março de 2004, todos os crustáceos palaemonídeos adultos que utilizaram o mecanismo foram contados e o número de jovens estimado. Duas espécies foram registradas: Macrobrachium carcinus (Linnaeus, 1758) e Macrobrachium acanthurus (Wiegmann, 1836). A utilização do mecanismo por adultos foi bastante restrita, com apenas 185 exemplares registrados. Porém, o número de jovens de M. carcinus utilizan...

  18. Ciliated protists from the nepheloid layer and water column of sites affected by the Deepwater Horizon oil spill in the Northeastern Gulf of Mexico

    Science.gov (United States)

    Moss, Joseph A.; McCurry, Chelsea; Tominack, Sarah; Romero, Isabel C.; Hollander, David; Jeffrey, Wade H.; Snyder, Richard A.

    2015-12-01

    Benthic marine protists have been well documented from shallow marine benthic habitats but remain understudied in deeper habitats on continental shelves and slopes, particularly in the Northeastern Gulf of Mexico (NEGOM). This region was affected by a deep water oil well failure (BP-Deepwater Horizon, 2010). The combination of a lack of information on deep sea microbenthic communities and the potential for benthic microbial petroleum mineralization prompted this investigation. Water column and nepheloid layer samples were obtained via Niskin bottles and a multicorer respectively at stations across the NEGOM to: (1) determine whether nepheloid and water column communities are distinct and (2) assess benthic species richness relative to sediment PAH contamination. Phylum specific 18S rRNA gene amplification was used to construct clone libraries of ciliate assemblages. BLAST searches in the NCBI database indicated that a majority (~75%) of the clone sequences corresponded (94-100% similarity) with listed, yet unclassified sequences. Several putative species were common at most site locations and depths. Many known benthic ciliates, such as Uronychia transfuga, Uronychia setigera, and Spirotrachelostyla tani, were common in the nepheloid layer samples and not recovered in water column samples. Ciliated protist species richness increased with PAH levels found in surface sediments, suggesting a positive microbial response to petroleum enrichment of the benthos. The presence of previously unknown microbenthic communites in the nephaloid layer over oceanic clay-silt muds alters our view of microbial processes in the deep sea and merits investigation of the microbial processes and rates of microbial mineralization and biomass production important to global biogeochemistry.

  19. Mating of the stichotrichous ciliate Oxytricha trifallax induces production of a class of 27 nt small RNAs derived from the parental macronucleus.

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    Alan M Zahler

    Full Text Available Ciliated protozoans possess two types of nuclei; a transcriptionally silent micronucleus, which serves as the germ line nucleus, and a transcriptionally active macronucleus, which serves as the somatic nucleus. The macronucleus is derived from a new diploid micronucleus after mating, with epigenetic information contributed by the parental macronucleus serving to guide the formation of the new macronucleus. In the stichotrichous ciliate Oxytricha trifallax, the macronuclear DNA is highly processed to yield gene-sized nanochromosomes with telomeres at each end. Here we report that soon after mating of Oxytricha trifallax, abundant 27 nt small RNAs are produced that are not present prior to mating. We performed next generation sequencing of Oxytricha small RNAs from vegetative and mating cells. Using sequence comparisons between macronuclear and micronuclear versions of genes, we found that the 27 nt RNA class derives from the parental macronucleus, not the developing macronucleus. These small RNAs are produced equally from both strands of macronuclear nanochromosomes, but in a highly non-uniform distribution along the length of the nanochromosome, and with a particular depletion in the 30 nt telomere-proximal positions. This production of small RNAs from the parental macronucleus during macronuclear development stands in contrast to the mechanism of epigenetic control in the distantly related ciliate Tetrahymena. In that species, 28-29 nt scanRNAs are produced from the micronucleus and these micronuclear-derived RNAs serve as epigenetic controllers of macronuclear development. Unlike the Tetrahymena scanRNAs, the Oxytricha macronuclear-derived 27 mers are not modified by 2'O-methylation at their 3' ends. We propose models for the role of these "27macRNAs" in macronuclear development.

  20. Ciliates (Protozoa from dried sediments of a temporary pond from Argentina Ciliados (Protozoa de sedimentos secos de una charca temporaria de la Argentina

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    Gabriela Cristina Küppers

    2009-12-01

    Full Text Available Temporary ponds represent special environments that are inhabited by organisms adapted to changing environmental conditions. Ciliates are able to survive complete loss of water in these transient habitats through cyst formation. However, ciliates from the Neotropical region in general have been poorly studied with modern techniques. The main goal of this study is to describe the ciliates in dried sediments of a temporary pond from Buenos Aires Province, Argentina, through sampling efforts that were performed 2003-2005. Soil samples were obtained during drought phases and re wetted in laboratory to establish raw and enriched cultures. Ciliates were then studied both in vivo and after impregnation with protargol. In this study, we present 4 new records for Argentina (Gonostomum affine (Stein, 1859 Sterki, 1878, Stylonychia bifaria (Stokes, 1887 Berger, 1999, Pleurotricha lanceolata (Ehrenberg, 1835 Stein, 1859, Meseres corlissi Petz and Foissner, 1992, 1 for South America (Blepharisma americanum (Suzuki, 1954 Hirshfield, Isquith and Bhandary, 1965, and 2 for the Neotropical Realm (Gonostomum strenuum (Engelmann, 1862 Sterki, 1878, Stylonychia lemnae Ammermann and Schlegel, 1983.Los cuerpos de agua temporarios son ambientes particulares que se encuentran habitados por organismos adaptados a condiciones fluctuantes. Los ciliados son capaces de sobrevivir a la pérdida completa de agua del ambiente gracias a la formación de estructuras de resistencia. Por otra parte, los ciliados de la región Neotropical han sido poco investigados con técnicas modernas. El objetivo de este estudio es referir los ciliados que se desarrollaron a partir de los sedimentos secos de una charca temporaria de la provincia de Buenos Aires, Argentina, en la que se realizaron muestreos durante el período 2003-2005. Las muestras de suelo fueron obtenidas durante las fases de sequía y luego resuspendidas en el laboratorio para realizar cultivos naturales y enriquecidos. Los

  1. Identification of cAMP-dependent phosphorylated proteins involved in the formation of environment-resistant resting cysts by the terrestrial ciliate Colpoda cucullus

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    Y Sogame

    2014-07-01

    Full Text Available In the terrestrial ciliate Colpoda cucullus, an elevation of the intracellular cAMP concentration was reported to be involved in environment-resistant resting cyst formation. In the present study, cAMP-dependently phosphorylated proteins of encystment-induced C. cucullus were isolated with Phos-tag agarose phosphate-affinity beads and subsequent SDS-PAGE. In a liquid chromatography/tandem mass spectrometry analysis of these phosphoproteins, 27-, 37- and 43-kDa proteins (p27, p37 and p43 were identified as Rieske iron-sulfur protein, histone H4 (hyperacetylated form, and actin, respectively.

  2. The mitochondrial genome sequence of the ciliate Paramecium caudatum reveals a shift in nucleotide composition and codon usage within the genus Paramecium

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    Berendonk Thomas U

    2011-05-01

    Full Text Available Abstract Background Despite the fact that the organization of the ciliate mitochondrial genome is exceptional, only few ciliate mitochondrial genomes have been sequenced until today. All ciliate mitochondrial genomes are linear. They are 40 kb to 47 kb long and contain some 50 tightly packed genes without introns. Earlier studies documented that the mitochondrial guanine + cytosine contents are very different between Paramecium tetraurelia and all studied Tetrahymena species. This raises the question of whether the high mitochondrial G+C content observed in P. tetraurelia is a characteristic property of Paramecium mtDNA, or whether it is an exception of the ciliate mitochondrial genomes known so far. To test this question, we determined the mitochondrial genome sequence of Paramecium caudatum and compared the gene content and sequence properties to the closely related P. tetraurelia. Results The guanine + cytosine content of the P. caudatum mitochondrial genome was significantly lower than that of P. tetraurelia (22.4% vs. 41.2%. This difference in the mitochondrial nucleotide composition was accompanied by significantly different codon usage patterns in both species, i.e. within P. caudatum clearly A/T ending codons dominated, whereas for P. tetraurelia the synonymous codons were more balanced with a higher number of G/C ending codons. Further analyses indicated that the nucleotide composition of most members of the genus Paramecium resembles that of P. caudatum and that the shift observed in P. tetraurelia is restricted to the P. aurelia species complex. Conclusions Surprisingly, the codon usage bias in the P. caudatum mitochondrial genome, exemplified by the effective number of codons, is more similar to the distantly related T. pyriformis and other single-celled eukaryotes such as Chlamydomonas, than to the closely related P. tetraurelia. These differences in base composition and codon usage bias were, however, not reflected in the amino

  3. Phylogenetic positions of two marine ciliates, Metanophrys similis and Pseudocohnilembus hargisi (Protozoa, Ciliophora, Scuticociliatia), inferred from complete small subunit rRNA gene sequences

    Institute of Scientific and Technical Information of China (English)

    2006-01-01

    The small subunit rRNA (SSrRNA) gene was sequenced for two marine scuticociliates Metanophrys similis and Pseudocohnilembus hargisi. The results show that this gene comprises 1763 and 1753 nucleotides in the two marine ciliates respectively.Metanophrys similis is phylogenetically closely related to the clade containing Mesanophrys carcini and Anophyroides haemophila, which branches basally to other species within the order Philasterida. Pseudocohnilembus hargisi groups with its congener, P. marinus, with strong bootstrap support. Paranophrys magna groups with the clade including Cohnilembus and Uronema, representing a sister clade to that containing the two Pseudocohnilembus species.

  4. Avaliação dos níveis de clorofila em folhas de tomateiro da cultivar Santa Clara, do mutante ‘firme’ e do híbrido F1 - DOI: 10.4025/actascibiolsci.v25i1.2110 Chlorophyll level evaluation in tomatoes leaves of Santa Clara cultivar, of ‘firme’ mutant and hybrid F1 - DOI: 10.4025/actascibiolsci.v25i1.2110

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    Aldo Shimoya

    2003-04-01

    Full Text Available Recentemente, na região produtora de hortaliças de Viçosa, Estado de Minas Gerais, foram identificadas plantas de tomate da cultivar Santa Clara, Lycopersicum esculentum (Solanaceae, que se mostraram potencialmente úteis em programas de melhoramento que visem aumentar a vida de prateleira de frutos. No entanto, essas plantas promissoras, denominadas de ‘mutante firme’, apresentam senescência foliar precoce e redução do tamanho médio dos frutos, quando o gene se encontra no estado homozigótico recessivo, sendo visualmente normal quando no estado heterozigótico. Assim o objetivo do presente trabalho foi avaliar os níveis de pigmentos foliares em diferentes posições da planta e em diferentes tempos de cultivo, pelos métodos descritos por Lichtenthaler (1987 e pelo índice SPAD (Soil Plant Analylitical Division Value, para verificar a ocorrência ou não de comportamento diferencial de indivíduos heterozigotos em relação aos progenitores Santa Clara e ao mutante ‘firme’. Para isso, foram realizados dois experimentos, empregando-se plantas cultivadas em vasos, submetidas a condições de casa-de-vegetação e arranjadas em delineamento inteiramente casualizado. Os resultados das análises, pelo método de Lichtenthaler (1987 mostraram que a clorofila e os pigmentos carotenóides são degradados mais precocemente no mutante ‘firme’ em relação à cultivar Santa Clara. Além do que, pelo índice SPAD observou-se que os indivíduos, portando a mutação no estado heterozigótico, e os da cultivar Santa Clara apresentaram taxas similares de degradação de clorofila em relação ao tempo de cultivo. Com isso, pode-se concluir que a mutação no estado heterozigótico, em cruzamento com Santa Clara, tem seus efeitos restaurados para esses caracteres bioquímicosRecently, in Viçosa (MG, a region of vegetable crop producing, tomatoes of Santa Clara cultivar, Lycopersicum esculentum (Solanaceae, that showed potential use for

  5. Efeitos de doses e formas de aplicação de reguladores de crescimento em uvas sem sementes, cv. BRS Clara, em região tropical Effects of plant growth regulators for growth in seedless grape, cv. BRS Clara, in tropical region

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    Reginaldo Teodoro de Souza

    2010-09-01

    Full Text Available O objetivo deste trabalho foi avaliar o efeito do uso dos reguladores vegetais, ácido giberélico e tidiazuron, no tamanho de bagas da cultivar BRS Clara em Região Tropical. Os experimentos foram conduzidos em 2006 e 2007, na Estação Experimental de Viticultura Tropical, em Jales-SP, região noroeste do Estado de São Paulo, em plantas da cv. BRS Clara. Foram testadas diferentes concentrações de GA3 aplicadas isoladamente, combinadas com Crop Set ou tidiazuron, em aplicações únicas ou sequênciais (2 e 4 vezes. As avaliações foram feitas por ocasião da maturação das uvas, considerando-se a massa fresca dos cachos, dos engaços e das bagas, determinadas por meio de balança analítica; o comprimento e o diâmetro médio das bagas, utilizando-se de paquímetro; e o teor de sólidos solúveis (SS, por meio de refratômetro manual. Os experimentos foram conduzidos em delineamento experimental de blocos casualizados, representados por uma planta, com 15 repetições, no ano de 2006, e 10 repetições, no ano de 2007. Os dados foram submetidos à análise de variância e, para a comparação das médias dos tratamentos, foi utilizado o teste Skott Nott, ao nível de 5% de probabilidade. Observou-se que o uso dos reguladores promoveu o crescimento das bagas na cultivar BRS Clara em todos os tratamentos, diferindo da testemunha.The purpose of this study was to evaluate the effect of the use of plant growth regulators, gibberellic acid and thidiazuron about the size of the berries BRS Clara in Tropical Region. The experiments were conducted in 2006 and 2007, in the Experimental Station of Tropical Viticulture in Jales, SP, northwestern state of São Paulo. Were tested different concentrations of GA3 applied in isolation, combined with Crop set and thidiazuron, in single or sequential applications (2 and 4 times. The assessments were made during the ripening of the grapes, considering the masses of fresh bunch of rachis and berry, determined

  6. Ku-mediated coupling of DNA cleavage and repair during programmed genome rearrangements in the ciliate Paramecium tetraurelia.

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    Antoine Marmignon

    2014-08-01

    Full Text Available During somatic differentiation, physiological DNA double-strand breaks (DSB can drive programmed genome rearrangements (PGR, during which DSB repair pathways are mobilized to safeguard genome integrity. Because of their unique nuclear dimorphism, ciliates are powerful unicellular eukaryotic models to study the mechanisms involved in PGR. At each sexual cycle, the germline nucleus is transmitted to the progeny, but the somatic nucleus, essential for gene expression, is destroyed and a new somatic nucleus differentiates from a copy of the germline nucleus. In Paramecium tetraurelia, the development of the somatic nucleus involves massive PGR, including the precise elimination of at least 45,000 germline sequences (Internal Eliminated Sequences, IES. IES excision proceeds through a cut-and-close mechanism: a domesticated transposase, PiggyMac, is essential for DNA cleavage, and DSB repair at excision sites involves the Ligase IV, a specific component of the non-homologous end-joining (NHEJ pathway. At the genome-wide level, a huge number of programmed DSBs must be repaired during this process to allow the assembly of functional somatic chromosomes. To understand how DNA cleavage and DSB repair are coordinated during PGR, we have focused on Ku, the earliest actor of NHEJ-mediated repair. Two Ku70 and three Ku80 paralogs are encoded in the genome of P. tetraurelia: Ku70a and Ku80c are produced during sexual processes and localize specifically in the developing new somatic nucleus. Using RNA interference, we show that the development-specific Ku70/Ku80c heterodimer is essential for the recovery of a functional somatic nucleus. Strikingly, at the molecular level, PiggyMac-dependent DNA cleavage is abolished at IES boundaries in cells depleted for Ku80c, resulting in IES retention in the somatic genome. PiggyMac and Ku70a/Ku80c co-purify as a complex when overproduced in a heterologous system. We conclude that Ku has been integrated in the Paramecium

  7. Ku-mediated coupling of DNA cleavage and repair during programmed genome rearrangements in the ciliate Paramecium tetraurelia.

    Science.gov (United States)

    Marmignon, Antoine; Bischerour, Julien; Silve, Aude; Fojcik, Clémentine; Dubois, Emeline; Arnaiz, Olivier; Kapusta, Aurélie; Malinsky, Sophie; Bétermier, Mireille

    2014-08-01

    During somatic differentiation, physiological DNA double-strand breaks (DSB) can drive programmed genome rearrangements (PGR), during which DSB repair pathways are mobilized to safeguard genome integrity. Because of their unique nuclear dimorphism, ciliates are powerful unicellular eukaryotic models to study the mechanisms involved in PGR. At each sexual cycle, the germline nucleus is transmitted to the progeny, but the somatic nucleus, essential for gene expression, is destroyed and a new somatic nucleus differentiates from a copy of the germline nucleus. In Paramecium tetraurelia, the development of the somatic nucleus involves massive PGR, including the precise elimination of at least 45,000 germline sequences (Internal Eliminated Sequences, IES). IES excision proceeds through a cut-and-close mechanism: a domesticated transposase, PiggyMac, is essential for DNA cleavage, and DSB repair at excision sites involves the Ligase IV, a specific component of the non-homologous end-joining (NHEJ) pathway. At the genome-wide level, a huge number of programmed DSBs must be repaired during this process to allow the assembly of functional somatic chromosomes. To understand how DNA cleavage and DSB repair are coordinated during PGR, we have focused on Ku, the earliest actor of NHEJ-mediated repair. Two Ku70 and three Ku80 paralogs are encoded in the genome of P. tetraurelia: Ku70a and Ku80c are produced during sexual processes and localize specifically in the developing new somatic nucleus. Using RNA interference, we show that the development-specific Ku70/Ku80c heterodimer is essential for the recovery of a functional somatic nucleus. Strikingly, at the molecular level, PiggyMac-dependent DNA cleavage is abolished at IES boundaries in cells depleted for Ku80c, resulting in IES retention in the somatic genome. PiggyMac and Ku70a/Ku80c co-purify as a complex when overproduced in a heterologous system. We conclude that Ku has been integrated in the Paramecium DNA cleavage

  8. Morphology, morphogenesis and gene sequence of a freshwater ciliate, Pseudourostyla cristata (Ciliophora, Urostyloidea) from the ancient Lake Biwa, Japan.

    Science.gov (United States)

    Chen, Xumiao; Li, Zicong; Hu, Xiaozhong; Kusuoka, Yasushi

    2010-01-01

    The urostyloid freshwater ciliate Pseudourostyla cristata was recorded for the first time from Lake Biwa, a 4-million-year-old lake located in Shiga Prefecture, Japan. Its morphology and morphogenesis were investigated using live observation and protargol impregnation, and the SSU ribosomal RNA gene was sequenced. Based on the current observations and previous descriptions, this species is readily recognized mainly by the following characters: body slender or broadly oval to elliptical, and dark grey in color; size in vivo about 170-400 x 40-150 microm; pellicle flexible and contractile, with extrusomes forming a hyaline seam underneath; ciliature comprising about 60-130 adoral membranelles, usually 1 buccal cirrus, 20-24 frontal, 2 frontoterminal, 17-26 pairs of midventral, and 5-16 transverse cirri, 4-6 left and 4-5 right marginal rows, and 8-10 dorsal kineties; 15-83 macronuclear nodules and 2-9 micronuclei; freshwater habitat. The main morphogenetic developments are: (1) the oral primordium for the proter originates de novo on the dorsal wall of the buccal cavity, and the dedifferentiated undulating membranes and some parental proximal membranelles join in the primordial development; the old adoral zone will be partly replaced by new structures; (2) the oral primordium for the opisthe occurs epiapokinetally left of the midventral complex between the adoral zone and the transverse cirri; (3) the fronto-midventral transverse cirral (FVT) anlagen develop separately in both dividers by dedifferentiation of most of the midventral cirri; (4) the single buccal cirrus is generated from the posterior end of FVT anlage II; (5) the leftmost frontal cirrus is derived from the anterior end of the undulating membranes anlage (FVT anlage I); (6) the marginal rows of each side are formed from a single anlage which arises within the rightmost row; (7) the dorsal kineties develop by intrakinetal basal body proliferation; and (8) the most posterior FVT anlage contributes the two

  9. Ruminal degradability and ciliates protozoa population in rumen of Nellore steers fed with high concentrated diet supplemented with live yeast, monensin and salinomycin

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    Josiane Hernades Ortolan

    2010-01-01

    Full Text Available Four Nelore steers had been used, with average alive weight of 190±32 kg, in experimental delineation by 4x4 latin square, whith the objective of evaluate the effect of the yeast monensin and salinomycin on the parameters of ruminal degradability and the ciliates protozoa population present in the animals rumen. The diet offered to the animals was composed by sorghum silage and concentrated (30:70, respectively, where the four different treatments had been submitted in accordance with the used additive: 5,0g of yeast culture (Beef Sacc®; 0.42g of salinomycin (Coxistac®; 2.0g of monensin (Rumensin® and the control, without additive. The experimental period was subdivided in 21 days of adaptation and seven of harvest, totalized 28 days of experimental period. It had increase of the value for fraction “b” in the dry matter, the treatment with yeast culture, and the salinomycin treatment (P<0,05. The treatment with yeast significantly increased the number of rumen ciliates protozoa (P<0,05.

  10. Isolation and structural characterization of two water-borne pheromones from Euplotes crassus, a ciliate commonly known to carry membrane-bound pheromones.

    Science.gov (United States)

    Alimenti, Claudio; Vallesi, Adriana; Federici, Sergio; di Giuseppe, Graziano; Fernando, Dini; Carratore, Vitale; Luporini, Pierangelo

    2011-01-01

    Ciliates comprise species synthesizing water-diffusible mating type factors or pheromones and species synthesizing insoluble, cell membrane-bound pheromones. Euplotes crassus has traditionally been placed in the latter group. In contrast with this notion, we found that E. crassus is a constitutive pheromone-secreting ciliate, like other Euplotes species. From cell-free filtrate preparations of the E. crassus strain L-2D, we isolated two distinct pheromones, designated as Ec-α and Ec-1, and determined their complete amino acid sequences by combined chemical and genetic approaches. The Ec-α pheromone sequence extends for 56 amino acid residues with six cysteines and shows a molecular mass of 6,183 Da, while the Ec-1 pheromone sequence extends for 45 amino acid residues with 10 cysteines and shows a molecular mass of 4,840 Da. Marked structural differences distinguish the full-length Ec-α and Ec-1 coding sequences, which have been cloned and characterized from the transcriptionally active macronuclear genome. They were taken as clear indication that the Ec-α and Ec-1 pheromones are specified by genes that are not allelic, but likely derived from a duplicated genetic locus of the transcriptionally silent micronuclear genome.

  11. The Anti-Oxidant Defense System of the Marine Polar Ciliate Euplotes nobilii: Characterization of the MsrB Gene Family

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    Francesca Ricci

    2017-01-01

    Full Text Available Organisms living in polar waters must cope with an extremely stressful environment dominated by freezing temperatures, high oxygen concentrations and UV radiation. To shed light on the genetic mechanisms on which the polar marine ciliate, Euplotes nobilii, relies to effectively cope with the oxidative stress, attention was focused on methionine sulfoxide reductases which repair proteins with oxidized methionines. A family of four structurally distinct MsrB genes, encoding enzymes specific for the reduction of the methionine-sulfoxide R-forms, were identified from a draft of the E. nobilii transcriptionally active (macronuclear genome. The En-MsrB genes are constitutively expressed to synthesize proteins markedly different in amino acid sequence, number of CXXC motifs for zinc-ion binding, and presence/absence of a cysteine residue specific for the mechanism of enzyme regeneration. The En-MsrB proteins take different localizations in the nucleus, mitochondria, cytosol and endoplasmic reticulum, ensuring a pervasive protection of all the major subcellular compartments from the oxidative damage. These observations have suggested to regard the En-MsrB gene activity as playing a central role in the genetic mechanism that enables E. nobilii and ciliates in general to live in the polar environment.

  12. Emergence of the Terrestrial Ciliate Colpoda cucullus from a Resting Cyst: Rupture of the Cyst Wall by Active Expansion of an Excystment Vacuole

    Science.gov (United States)

    Funadani, Ryoji; Suetomo, Yasutaka; Matsuoka, Tatsuomi

    2013-01-01

    The first sign of excysting Colpoda cucullus cells is the initiation of the pulsation of a contractile vacuole, which is then replaced by a non-pulsating vacuole (excystment vacuole) that continues to expand and finally ruptures the outermost cyst wall (ectocyst) due to inner pressure. A ciliate surrounded by flexible membranes (endocyst) thus emerges. The osmolarity of the excysting cells is estimated to be 140 mOsm L−1 from the relationship between the frequency of contractile vacuole pulsation and the external sucrose concentration. Both the expansion of the excystment vacuole and the emergence of ciliates occurred even when the cysts were immersed in hypertonic medium. In hypotonic medium containing sodium azide (NaN3, a cytochrome c oxidase inhibitor), the contractile vacuole of vegetative cells stopped pulsating and gradually expanded, causing cells to burst. When C. cucullus was induced to encyst in a hypotonic medium containing NaN3, the expansion of the excystment vacuoles was inhibited. These results suggest that the active uptake of water may be responsible for the expansion of the excystment vacuole required for the ectocyst to rupture. PMID:23268793

  13. Effects of low-concentration NO/sub x/SO2 gas mixtures on lung structure and blood-oxygen affinity in rats

    Energy Technology Data Exchange (ETDEWEB)

    Azoulay, E.; Soler, P.; Moreau, J.; Blayo, M.C.

    1980-08-01

    The respiratory effects of low levels of SO2 alone or associated with NO or NO2 were studied in rats exposed for periods of one day to thirteen weeks. Blood variables of the exposed rats were not significantly different from those of controls, and hemoglobin affinity was not modified. Bronchiolar and tracheal epithelia were studied by scanning electron microscopy. Bronchiolar and tracheal epithelia were normally ciliated. No synergistic effects were produced by either SO2 + NO or SO2 + NO2.

  14. Programación del riego de la papa en el “Valle del Yabú”, Santa Clara, Cuba.

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    B. Job

    2010-02-01

    Full Text Available The objective of the current research was to study the applied irrigation scheduling of the potato during two crop cycles (2009 -2009/10 in Cooperative No. 2 in the Yabú Valley of Santa Clara. Also to carry out corrections required in order to establish a scientifically based irrigation program. In the first crop cycle it was proven that the timing of irrigation application and the amount of water applied did not meet the technical criteria but was dependant on the decisions taken by persons with practical experience in relation to this activity and the programming of irrigation characterized by the application of small depths of irrigation which did not moisten below 20 cm of soil depth in a way which the irrigation interfered with the cultural and chemical processes and left the soil with a hydric deficit. In both crops tension meter were placed at 20 and 40 soil depth, taking periodic measurement of humidity and daily measurements of soil and balance water, because of this the number of irrigation was reduce during the second crop cycle.El objetivo del presente trabajo, ejecutado durante dos cosechas 2009 y 2009-10 fue estudiar la programación del riego de la papa que se realiza en la Unidad Cooperativa No.2 del “Valle del Yabú” de Santa Clara y realizar correcciones para lograr el establecimiento de una programación de riego científicamente fundamentada. En la primera cosecha, se comprobó que el momento de aplicación del riego y el volumen de agua aportado no obedecían a criterios técnicos, sino que dependían de decisiones empíricas de las personas que se relacionaban con esta actividad y la programación del riego se caracterizaba por aplicar muy pequeñas láminas de agua que no lograban humedecer 20 cm de profundidad de suelo, de modo que, el riego obstaculizaba las labores fitosanitarias y culturales y dejaba el suelo con déficit hídrico. En ambas cosechas, se colocaron tensiómetros a 20 y 40 cm de profundidad del suelo

  15. Diagnóstico mediante técnicas de ultrasonidos del forjado de madera del refectorio del Convento de Santa Clara en Carmona (Sevilla

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    Pérez Gálvez, Filomena

    2004-04-01

    Full Text Available Ultrasonic tests are an effective technique of getting adiagnosis of timber structures in historical buildings. Thistechnique is quite valuable to undertake a restoration job. Anew methodology of analysis and diagnosis of timber roofsthrough this non destructive technique is presented.The aim of this article is to get the state of damage and thebending strenght capacity of the timber roof of the Monasteryof Santa Clara in Carmona (Seville dining´s room by usingthis technology.From the results obtained about the bending strenghtcapacity of the studied beams, it can be affirmed that thetimber roof is not able to support safely enough the new useproposed.Considering the historic and artistic importance of thistimber roof, we propose as a restoration methodology basedon hanging the roof through bolts from a reinforced concreteplatform built-in the perimeter walls. This solutionguarantees that the timber roof does not work, just adjustingthe distance between the bolts.Los métodos de ultrasonidos son una técnica eficaz para eldiagnóstico de elementos estructurales de madera enedificios antiguos. Esta técnica proporciona una gran ayudaa la hora de acometer una obra de rehabilitación. Sepresenta una metodología de análisis y diagnostico deforjados de madera mediante dicha técnica no destructiva.El objetivo de este artículo es obtener el grado de deterioro yla capacidad resistente de la madera del alfarje delrefectorio del Convento de Santa Clara en Carmona (Sevillautilizando la metodología propuesta.Por extrapolación de los resultados obtenidos sobre lacapacidad resistente de las vigas estudiadas se puedeconcluir que el conjunto del forjado no es capaz de soportarcon seguridad suficiente el nuevo uso propuesto.Teniendo en cuenta el valor histórico artístico del alfarje sepropone y aporta como solución de rehabilitación laconsistente en colgar el forjado existente mediante pernos deuna losa de hormigón armado empotrada en los

  16. Inference of Eco-geomorphic Processes Using Integrated Historical Data for a Rapidly Changing Mediterranean-climate River Corridor: Lower Santa Clara River, California

    Science.gov (United States)

    Beller, E. E.; Grossinger, R. M.; Downs, P. W.; Orr, B. K.

    2010-12-01

    Environmental conservation demands reach-specific data as the basis for place-based restoration and management measures. However, areas such as the lower Santa Clara River valley have been subject to intensive modification since the at least the nineteenth century, but without regular hydrogeomorphic or ecological monitoring (e.g., flow gauging, repeat topographic surveys, vegetation mapping) until the mid-twentieth century. This gap has limited data on former river corridor form and understanding of historical eco-geomorphic processes. The result is a lack of consensus about the range of potential riparian and aquatic habitats to consider as restoration targets, their appropriate relative distribution, and the relationship between such ecological targets and physical processes on the river, past and present. To address this data gap on the lower Santa Clara River, we initiated an effort to extend the documentation of river characteristics beyond readily available early data sets (such as aerial photography from 1927) by integrating historical cartographic, textual, and visual accounts to create a heterogeneous but substantial dataset describing hydrologic, geomorphic, and riparian characteristics back to 1769 - the date of the first non-native exploration of the region. We collected over 1,000 documents, including General Land Office survey data, early maps from the county surveyor, and traveler’s accounts of the region, evaluating each source for its accuracy and reliability. These data were synthesized to evaluate the location and composition of riparian areas that persisted despite substantial flood events and impacts of rapidly changing land use, and to determine aspects of the former hydrology of the river affecting riparian pattern that are still relevant today. The data also indicate the general resilience of mainstem channel form in response to these events in contrast to the present-day eco-geomorphic system, which is far more sensitive to change. Used

  17. Utilização do mecanismo de transposição de peixes da Usina Hidrelétrica Santa Clara por camarões (Palaemonidae, bacia do rio Mucuri, Minas Gerais, Brasil Use of Santa Clara Power Plant fish lift by Palaemonidae shrimps, Mucuri River basin, Minas Gerais, Brazil

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    Paulo dos S. Pompeu

    2006-03-01

    Full Text Available Durante a operação do elevador para peixes da Usina Hidrelétrica Santa Clara, de novembro de 2003 a março de 2004, todos os crustáceos palaemonídeos adultos que utilizaram o mecanismo foram contados e o número de jovens estimado. Duas espécies foram registradas: Macrobrachium carcinus (Linnaeus, 1758 e Macrobrachium acanthurus (Wiegmann, 1836. A utilização do mecanismo por adultos foi bastante restrita, com apenas 185 exemplares registrados. Porém, o número de jovens de M. carcinus utilizando o elevador foi estimado em 19.120 indivíduos. Embora o mecanismo avaliado tenha permitido a passagem dos palaemonídeos para montante do barramento, ficou clara a necessidade de novos arranjos estruturais e de manejo específicos para esses animais. Essas ações se referem ao desenvolvimento de estruturas direcionadas para a sua passagem e a adoção de vertimentos programados durante o período reprodutivo para permitir o carreamento de larvas para jusante. Esses dois caminhos representam formas efetivas de manejo, imprescindíveis para a manutenção das populações deste importante componente da biota aquática.During the Santa Clara Power Plant fish lift operation, from November 2003 to March 2004, Palaemonidae adult specimens were counted and identified and estimated juveniles number. Two Palaemonidae species were recorded: Macrobrachium carcinus (Linnaeus, 1758 and Macrobrachium acanthurus (Wiegmann, 1836. The use of the fish lift by adults was restricted, since only 185 individuals were registered. However, the estimated juveniles number was 19,120 individuals. Although existing fish passage systems could be considered as an alternative for Palaemonidae migration, planned spills during the reproductive periods could allow the drift of larvae. Moreover, the constructions of specific structures for upstream migration should be considered as an alternative for the maintenance of this important component of aquatic biota.

  18. Separate Culture and Morphological Observation of Free Living Amoebae and Ciliates%自生阿米巴和纤毛虫的分离培养与观察

    Institute of Scientific and Technical Information of China (English)

    岳爱梅; 刘营; 谭叶; 丛慧; 林佳慧; 张英杰; 张忠广

    2013-01-01

    Objective To study the methods of cultivation and morphological observation of free living amoebae and ciliates and observe the growth and species change of parasites in different time and vegetables. Methods Various green vegetable juice were prepared for cultivating the amoebae and ciliates at 37℃ The growth of free living amoebae and ciliates were observed using microscope. Results Rotary motion of ciliates was observed after cultivation for 48 hours.Decreased quantity and activity of ciliates and increased quantity and activity of free living amoebae were observed after cultivation for 72 hours. Decreased quantity of free living amoebae and ciliates were observed even disappeared but the cysts appeared after cultivation for 144 hours. And various green vegetable juice showed differences in culturing the amoebae and ciliates; between 72 h to 120 h ciliates could be found in celery juice, while free living amoebae were found between 96 h to 120 h. Ciliates could be easier to observe in rape flower juice between 72 h to 96h and free living amoebae easier to see in caraway juice between 72 h to 120 h. Conclusion This method is simple and convenient to observe the living amoebae and ciliates. It is useful in the parasitology teaching.%目的 研究建立自生阿米巴和纤毛虫的培养方法,观察不同菜种在不同时间寄生虫的生长情况及种类的变化.方法 制作不同蔬菜叶的悬液,37℃恒温培养,镜下观察不同时间自生阿米巴和纤毛虫的生长情况.结果 培养48 h后,可观察到纤毛虫活跃的旋转运动;72 h后纤毛虫数量减少,活动度降低,自生阿米巴出现,蠕动活跃;144 h后自生阿米巴、纤毛虫数量减少甚至观察不到,包囊出现,不同菜种在不同时间自生阿米巴、纤毛虫数量、种类也相应变化,如芹菜中纤毛虫在72~120 h、阿米巴在96~120 h数量最多,最易观察到,油菜中纤毛虫在72~96 h最易观察到,香菜中阿米巴在72~120 h

  19. Listeria monocytogenes virulence factor Listeriolysin O favors bacterial growth in co-culture with the ciliate Tetrahymena pyriformis, causes protozoan encystment and promotes bacterial survival inside cysts

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    Ermolaeva Svetlana A

    2010-01-01

    Full Text Available Abstract Background The gram-positive pathogenic bacterium Listeria monocytogenes is widely spread in the nature. L. monocytogenes was reported to be isolated from soil, water, sewage and sludge. Listeriolysin O (LLO is a L. monocytogenes major virulence factor. In the course of infection in mammals, LLO is required for intracellular survival and apoptosis induction in lymphocytes. In this study, we explored the potential of LLO to promote interactions between L. monocytogenes and the ubiquitous inhabitant of natural ecosystems bacteriovorous free-living ciliate Tetrahymena pyriformis. Results Wild type L. monocytogenes reduced T. pyriformis trophozoite counts and stimulated encystment. The effects were observed starting from 48 h of co-incubation. On the day 14, trophozoites were eliminated from the co-culture while about 5 × 104 cells/ml remained in the axenic T. pyriformis culture. The deficient in the LLO-encoding hly gene L. monocytogenes strain failed to cause mortality among protozoa and to trigger protozoan encystment. Replenishment of the hly gene in the mutant strain restored toxicity towards protozoa and induction of protozoan encystment. The saprophytic non-haemolytic species L. innocua transformed with the LLO-expressing plasmid caused extensive mortality and encystment in ciliates. During the first week of co-incubation, LLO-producing L. monocytogenes demonstrated higher growth rates in association with T. pyriformis than the LLO-deficient isogenic strain. At latter stages of co-incubation bacterial counts were similar for both strains. T. pyriformis cysts infected with wild type L. monocytogenes caused listerial infection in guinea pigs upon ocular and oral inoculation. The infection was proved by bacterial plating from the internal organs. Conclusions The L. monocytogenes virulence factor LLO promotes bacterial survival and growth in the presence of bacteriovorous ciliate T. pyriformis. LLO is responsible for L. monocytogenes

  20. Tissue-specific expression, hormonal regulation and 5'-flanking gene region of the rat Clara cell 10 kDa protein: comparison to rabbit uteroglobin.

    Science.gov (United States)

    Hagen, G; Wolf, M; Katyal, S L; Singh, G; Beato, M; Suske, G

    1990-01-01

    The amino acid sequence of rat Clara Cell 10 kDa secretory protein (CC10) shows 55% identity to rabbit uteroglobin. In order to define the relationship between rat CC10 and rabbit uteroglobin in detail, the tissue-specific expression and hormonal regulation of rat CC10 mRNA was analyzed. We report that like rabbit uteroglobin, rat CC10 mRNA is expressed in lung and esophagus, as well as in uteri of estrogen- and progesterone-treated females. Expression of CC10 mRNA in lung is regulated by glucocorticoids. The similarity in expression pattern of rat CC10 mRNA and rabbit uteroglobin mRNA is reflected by a striking similarity in the 5'-flanking regions of the two genes. Despite this overall similarity, two regions of 0.3 kb and 2.1 kb are absent in the rat CC10 upstream gene region. The larger region includes a cluster of hormone receptor binding sites, believed to be responsible for differential regulation of rabbit uteroglobin by glucocorticoids and progesterone. Thus, while the sequence identities in the coding and 5'-flanking regions point towards a common ancestor for the uteroglobin and CC10 gene, later events (deletions/insertions) might have caused species-specific differences in their regulation. Images PMID:2349092

  1. Caballos De Tracción De La Ciudad De Santa Clara, Cuba. I Algunos Parámetros Biométricos

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    Julio C. Castillo, Omelio Cepero,Reinaldo Quiñones,

    2006-09-01

    Full Text Available Se determinó la carga de arrastresegún la medida de la alzada y lacondición corporal de 100 caballosmachos castrados seleccionados al azarutilizados en el transporte local depasajeros en la ciudad de Santa Clara,Cuba. Adicionalmente se midió elperímetro torácico y los resultados seanalizaron estadísticamente medianteun análisis de varianza de clasificaciónsimple tomándose como factor lacondición corporal. Los resultadosrevelaron que el 35% de los animalesse encontraban desnutridos y el 100%sometidos a una carga de arrastresuperior a la establecida por lasregulaciones del Instituto de MedicinaVeterinaria según la condición corporaly la medida de la alzadarespectivamente. Los resultadosestadísticos revelaron que se puedeestimar la condición corporal de uncaballo conociendo los valores delperímetro torácico con un 95% deconfiabilidad, por lo que se recomendódesarrollar una guía práctica dirigida alpersonal responsabilizado con laestimación de la condición corporal delos caballos utilizados con este u otrofin.

  2. Simulation of ground-water/surface-water flow in the Santa Clara-Calleguas ground-water basin, Ventura County, California

    Science.gov (United States)

    Hanson, Randall T.; Martin, Peter; Koczot, Kathryn M.

    2003-01-01

    Ground water is the main source of water in the Santa Clara-Calleguas ground-water basin that covers about 310 square miles in Ventura County, California. A steady increase in the demand for surface- and ground-water resources since the late 1800s has resulted in streamflow depletion and ground-water overdraft. This steady increase in water use has resulted in seawater intrusion, inter-aquifer flow, land subsidence, and ground-water contamination. The Santa Clara-Calleguas Basin consists of multiple aquifers that are grouped into upper- and lower-aquifer systems. The upper-aquifer system includes the Shallow, Oxnard, and Mugu aquifers. The lower-aquifer system includes the upper and lower Hueneme, Fox Canyon, and Grimes Canyon aquifers. The layered aquifer systems are each bounded below by regional unconformities that are overlain by extensive basal coarse-grained layers that are the major pathways for ground-water production from wells and related seawater intrusion. The aquifer systems are bounded below and along mountain fronts by consolidated bedrock that forms a relatively impermeable boundary to ground-water flow. Numerous faults act as additional exterior and interior boundaries to ground-water flow. The aquifer systems extend offshore where they crop out along the edge of the submarine shelf and within the coastal submarine canyons. Submarine canyons have dissected these regional aquifers, providing a hydraulic connection to the ocean through the submarine outcrops of the aquifer systems. Coastal landward flow (seawater intrusion) occurs within both the upper- and lower-aquifer systems. A numerical ground-water flow model of the Santa Clara-Calleguas Basin was developed by the U.S. Geological Survey to better define the geohydrologic framework of the regional ground-water flow system and to help analyze the major problems affecting water-resources management of a typical coastal aquifer system. Construction of the Santa Clara-Calleguas Basin model required

  3. Relationships of field habitat measurements, visual habitat indices, and land cover to benthic macroinvertebrates in urbanized streams of the Santa Clara Valley, California

    Science.gov (United States)

    Fend, S.V.; Carter, J.L.; Kearns, F.R.

    2005-01-01

    We evaluated several approaches for measuring natural and anthropogenic habitat characteristics to predict benthic macroinvertebrate assemblages over a range of urban intensity at 85 stream sites in the Santa Clara Valley, California. Land cover was summarized as percentage urban land cover and impervious area within upstream buffers and the upstream subwatersheds. Field measurements characterized water chemistry, channel slope, sediment, and riparian canopy. In . addition to applying the visual-based habitat assessment in U.S. Environmental Protection Agency's rapid bioassessment protocol, we developed a simplified urban habitat assessment index based on turbidity, fine sediment deposition, riparian condition, and channel modification. Natural and anthropogenic habitat variables covaried along longitudinal stream gradients and were highly correlated with elevation. At the scale of the entire watershed, benthic macroinvertebrate measures were equally correlated with variables expressing natural gradients and urbanization effects. When natural gradients were reduced by partitioning sites into ecoregion subsection groupings, habitat variables most highly correlated with macroinvertebrate measures differed between upland and valley floor site groups. Among the valley floor sites, channel slope and physical modification of channel and riparian habitats appeared more important than upstream land cover or water quality in determining macroinvertebrate richness and ordination scores. Among upland sites, effects of upstream reservoir releases on habitat quality appeared important. Rapid habitat evaluation methods appeared to be an effective method for describing habitat features important to benthic macroinvertebrates when adapted for the region and the disturbance of interest. ?? 2005 by the American Fisheries Society.

  4. Reporte inicial de las investigaciones arqueológicas en el tercer claustro del antiguo convento de Santa Clara de Asís

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    Darwin A. Arduengo García

    2010-07-01

    Full Text Available Este trabajo propone una nueva lectura del tercer claustro del edificio del antiguo convento de Santa Clara de Asís de la Habana Vieja, sede del Centro Nacional de Conservación, Restauración y Museología (CENCREM. Los antecedentes de los que se parte críticamente son la importante investigación publicada por el historiador Pedro Herrera (2006, así como los reportes de las investigaciones arqueológicas llevadas a cabo en las áreas del edificio durante unos cincuenta años. Durante los últimos cinco años las investigaciones fundamentales realizadas por el grupo de arqueología del CENCREM en lo tocante al proyecto investigativo general del convento han estado dedicadas a las instalaciones hidráulicas del primer claustro y a los cambios constructivos del tercer claustro. Como consecuencia de las investigaciones en el tercer claustro se ha identificado una capilla no reportada en la bibliografía o en fuentes documentales

  5. ESTUDIO EMPÍRICO SOBRE LAS ESTRATEGIAS DE LOGÍSTICA INVERSA EN EL SECTOR INDUSTRIAL DE LA PROVINCIA DE VILLA CLARA

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    Roberto Cespón Castro

    2009-09-01

    Full Text Available

    El presente artículo contiene los principales resultados obtenidos de un estudio empírico sobre logística inversa en el sector industrial de la provincia de Villa Clara. En el mismo se parte de la hipótesis de que es posible identificar una taxonomía de estrategias de logística inversa que se subdivide en tres grandes tipos: Comercial, de Recuperación y Medio Ambiental, las cuales son validadas mediante el estudio. Ello permite identificar el estado del Arte de este importante componente de la Logística de los Negocios en todo un universo de empresas industriales de la mencionada provincia, como vía para una futura secuencia de acciones de mejoramiento.

  6. A case study for effects of operational taxonomic units from intracellular endoparasites and ciliates on the eukaryotic phylogeny: phylogenetic position of the haptophyta in analyses of multiple slowly evolving genes.

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    Hisayoshi Nozaki

    Full Text Available Recent multigene phylogenetic analyses have contributed much to our understanding of eukaryotic phylogeny. However, the phylogenetic positions of various lineages within the eukaryotes have remained unresolved or in conflict between different phylogenetic studies. These phylogenetic ambiguities might have resulted from mixtures or integration from various factors including limited taxon sampling, missing data in the alignment, saturations of rapidly evolving genes, mixed analyses of short- and long-branched operational taxonomic units (OTUs, intracellular endoparasite and ciliate OTUs with unusual substitution etc. In order to evaluate the effects from intracellular endoparasite and ciliate OTUs co-analyzed on the eukaryotic phylogeny and simplify the results, we here used two different sets of data matrices of multiple slowly evolving genes with small amounts of missing data and examined the phylogenetic position of the secondary photosynthetic chromalveolates Haptophyta, one of the most abundant groups of oceanic phytoplankton and significant primary producers. In both sets, a robust sister relationship between Haptophyta and SAR (stramenopiles, alveolates, rhizarians, or SA [stramenopiles and alveolates] was resolved when intracellular endoparasite/ciliate OTUs were excluded, but not in their presence. Based on comparisons of character optimizations on a fixed tree (with a clade composed of haptophytes and SAR or SA, disruption of the monophyly between haptophytes and SAR (or SA in the presence of intracellular endoparasite/ciliate OTUs can be considered to be a result of multiple evolutionary reversals of character positions that supported the synapomorphy of the haptophyte and SAR (or SA clade in the absence of intracellular endoparasite/ciliate OTUs.

  7. EVIDENCIA DE ESCORIAS DE COBRE PREHISPÁNICAS EN EL ÁREA DE SANTA CLARA DEL COBRE, MICHOACÁN, OCCIDENTE DE MÉXICO (Evidence of Prehispanic Copper Slags from the Santa Clara del Cobre Area, Michoacan, Western Mexico

    Directory of Open Access Journals (Sweden)

    José Luis Punzo Díaz

    2015-10-01

    Full Text Available En este artículo se presentan los primeros resultados de dataciones para objetos arqueológicos metálicos en Mesoamérica. A través del análisis arqueomagnético de las escorias, producto de la fundición del cobre en siete sitios arqueológicos de los alrededores de Santa Clara del Cobre, Michoacán, se logró ubicarlas cronológicamente; pudiendo determinar la presencia de esta tecnología de fundición desde los últimos cien años antes de la llegada de los españoles, durante el esplendor del Señorío Tarasco, hasta adentrado el siglo XVIII, cuando nuevas tecnologías y una producción masiva de cobre se desarrollaron en todos los territorios bajo el dominio español. ENGLISH: This paper presents the first magnetic dating of metal items in Mesoamerica. The archaeomagnetic analysis of the slags, the residual product of the copper smelting process from seven archaeological sites near the town of Santa Clara del Cobre, Michoacán State, made it possible to estimate their production time. The results obtained thus far suggest the presence of smelting technology in this area 100 years before the Spanish conquest, synchronous of apogee of the Tarascan Señorio, until the XVIII century when the development of new technologies and a massive production of copper occurred in whole territories under the Spanish dominance.

  8. Use of the PCR and fluorescent probes to recover SSU rRNA gene sequences from single cells of the ciliate protozoon Spathidium.

    Science.gov (United States)

    Dyal, P L; Hope, S; Roberts, D M; Embley, T M

    1995-08-01

    A two-stage heminested PCR approach was developed to amplify small subunit (SSU) rDNA sequences, via two overlapping fragments, from single cells of microbial eucaryotes. The method was evaluated using the ciliate protozoon Spathidium when PCR products were obtained from nine of 10 cells tested. Southern blotting demonstrated that all fragments contained the same sequence in a region of SSU rDNA which is normally highly variable between species. A fluorescent oligonucleotide probe was used to demonstrate that this sequence also occurred in fixed cells of Spathidium. Fixatives containing mercuric salts preserved cell shape and allowed probe binding with little background autofluorescence. The Spathidium sequence is closely related to that from the haptorid Homalozoon vermiculare.

  9. Rumen ciliates in the African (Cape) buffalo (Syncerus caffer caffer) living in the vicinity of the Orpen Gate entrance into Kruger National Park, South Africa.

    Science.gov (United States)

    Booyse, Dirk G; Dehority, Burk A; Reininghaus, Björn

    2014-07-31

    Samples of rumen contents were obtained from 10 African (Cape) buffalo living in the vicinity of the Orpen Gate entrance into Kruger National Park in South Africa. Total number of ciliate protozoa per animal ranged from 3.15 to 23.25 x 103. Forty three different species and forms were observed, of which 35 are a new host record. The total number of species and forms per animal varied from 10 to 17. Eudiplodinium maggii occurred in all 10 animals, followed by Dasytricha ruminantium in nine animals. Diplodinium posterovesiculatum, Eudiplodinium magnodentatum and Ostracodinium mammosum were present in seven animals with all other species and forms occurring in five or less animals. 

  10. ParameciumDB in 2011: new tools and new data for functional and comparative genomics of the model ciliate Paramecium tetraurelia.

    Science.gov (United States)

    Arnaiz, Olivier; Sperling, Linda

    2011-01-01

    ParameciumDB is a community model organism database built with the GMOD toolkit to integrate the genome and biology of the ciliate Paramecium tetraurelia. Over the last four years, post-genomic data from proteome and transcriptome studies has been incorporated along with predicted orthologs in 33 species, annotations from the community and publications from the scientific literature. Available tools include BioMart for complex queries, GBrowse2 for genome browsing, the Apollo genome editor for expert curation of gene models, a Blast server, a motif finder, and a wiki for protocols, nomenclature guidelines and other documentation. In-house tools have been developed for ontology browsing and evaluation of off-target RNAi matches. Now ready for next-generation deep sequencing data and the genomes of other Paramecium species, this open-access resource is available at http://paramecium.cgm.cnrs-gif.fr.

  11. Temporal variability of the microbial food web (viruses to ciliates under the influence of the Black Sea Water inflow (N. Aegean, E. Mediterranean

    Directory of Open Access Journals (Sweden)

    A. GIANNAKOUROU

    2015-01-01

    Full Text Available Τhe entire pelagic microbial food web was studied during the winter-spring period in the frontal area of the North Aegean Sea. Abundance of viruses, heterotrophic bacteria, cyanobacteria, auto- and hetero-trophic flagellates, and ciliates, as well as bacterial production, were measured at three stations (MD1, MD2, MD3 situated along a N-S transect between the area directly influenced by the inflowing Black Sea water and the area covered by the Levantine water. Samples were collected in December 2009, and January, March, April, and May 2011. Station MD1 exhibited the highest values of abundance and integrated biomass of all microbial groups and bacterial production during all months, and MD3 the lowest. Bacteria dominated the total integrated biomass at all stations and months, followed by cyanobacteria, auto-, hetero-trophic flagellates and ciliates. On a temporal scale, the microbial food web was less important in March as all microbial parameters at all stations showed the lowest values. After the phytoplankton bloom in March, the heterotrophic part of the microbial food web (mainly strongly increased, though the intensity of the phenomenon was diminished from North to South. Pico-sized plankton was found to be heterotrophic whereas nanoplankton was autotrophic. It seems that the influence of the Black Sea water on station MD1, permanent throughout the study period of early winter to late spring, was reflected in all microbial populations studied, and produced a more productive pelagic food web system, with potential consequences for the upper trophic levels.

  12. Effect of high levels of the rotifer Lecane inermis on the ciliate community in laboratory-scale sequencing batch bioreactors (SBRs).

    Science.gov (United States)

    Fyda, Janusz; Babko, Roman; Fiałkowska, Edyta; Pajdak-Stós, Agnieszka; Kocerba-Soroka, Wioleta; Sobczyk, Mateusz; Sobczyk, Łukasz

    2015-10-01

    Due to its ability to feed on filamentous bacteria, the rotifer Lecane inermis has already been recognized as a potential control agent of activated sludge bulking, which is usually caused by the excessive growth of filamentous microorganisms. However, their effectiveness depends, in part, on their abundance. We studied the influence of high densities of L. inermis on the protozoan community in activated sludge from a wastewater treatment plant (WWTP) in 4 laboratory-scale sequencing batch bioreactors (SBRs). Two treatments and two controls were subjected to nutrient removal system in process similar to that used in a WWTP. The experiment lasted 9 days and was repeated in 24-h cycles, including phases of agitation with feeding, aeration and agitation and sedimentation with decantation at the end of the cycle. In total, 32 taxa were identified, among which 25 were ciliated protozoa, 4 were amoebae, 2 were flagellates, and one was a nematode. Rotifers were then introduced to 2 bioreactors at a final concentration of 500ind.mL(-1), and the taxonomic composition and abundance of the activated sludge microfauna were assessed 2, 5 and 8 days thereafter. The mean density of ciliates on the first day of experiment was 12,610ind.mL(-1) and diminished to 4868±432ind.mL-±432ind.mL(-1) in the control and 5496±638ind.mL(-1) in the rotifer-treated group on the last day. Thus, even extremely high densities of artificially introduced rotifers did not negatively affect the protozoan community. On the contrary, the protozoan community was more diverse in the treatment group than in the control.

  13. Evaluation of tracer tests completed in 1999 and 2000 on the upper Santa Clara River, Los Angeles and Ventura Counties, California

    Science.gov (United States)

    Cox, Marisa H.; Mendez, Gregory O.; Kratzer, Charles R.; Reichard, Eric G.

    2003-01-01

    The interaction of surface water and hyporheic water along the Santa Clara River in Los Angeles and Ventura Counties, California, was evaluated by conducting tracer tests and analyzing water-quality data under different flow conditions in October 1999 and May 2000. Tracer and water-quality samples were collected at multiple river and hyporheic sites as well as at the Los Angeles County Sanitation Districts Saugus and Valencia Water Reclamation Plants. These water reclamation plants provide the main source of base flow in the river. Rhodamine WT dye was injected into the river to determine river traveltimes and to indicate when Lagrangian water-quality sampling could be performed at each site. Sodium bromide was injected into the river at a constant rate at the water reclamation plants to evaluate the surface-water and shallow ground-water interactions in the hyporheic zone. In the upper reach of the study area, which extends 2.9 river miles downstream from the Saugus Water Reclamation Plant, traveltime was 3.2 hours during May 2000. In the lower reach, which extends 14.1 river miles downstream from the Valencia Water Reclamation Plant, traveltime was 9.6 hours during October 1999 and 7.1 hours during May 2000. The sodium bromide tracer was detected at both hyporheic locations sampled during October 1999, and at two of the three hyporheic locations sampled during May 2000. On the basis of Rhodamine dye tests, flow curves were constructed from the discharge measurements in the Valencia reach. Flow-curve results indicate net gains in flow throughout most, but not all, of the upper parts of the reach and net losses in flow at the lower part of the reach. Lagrangian water-quality sampling provides information on the changes in chemistry as the water flows downstream from the water reclamation plants. Along both reaches there is an increase in sulfate (40-60 mg/L in the Saugus reach and 160 mg/L in the Valencia reach) and a decrease in chloride (about 45 mg/L in the

  14. On the optimal method for evaluating cloud products from passive satellite imagery using CALIPSO-CALIOP data: example investigating the CM SAF CLARA-A1 dataset

    Directory of Open Access Journals (Sweden)

    K.-G. Karlsson

    2013-02-01

    Full Text Available A method for detailed evaluation of a new satellite-derived global 28-yr cloud and radiation climatology (Climate Monitoring SAF Cloud, Albedo and Radiation dataset from AVHRR data, named CLARA-A1 from polar orbiting NOAA and Metop satellites is presented. The method combines 1 km and 5 km resolution cloud datasets from the CALIPSO-CALIOP cloud lidar for estimating cloud detection limitations and the accuracy of cloud top height estimations.

    Cloud detection is shown to work efficiently for clouds with optical thicknesses above 0.30 except for at twilight conditions when this value increases to 0.45. Some misclassifications generating erroneous clouds over land surfaces in semi-arid regions in the sub-tropical and tropical regions are revealed. In addition, a substantial fraction of all clouds remains undetected in the Polar regions during the polar winter season due to the lack of or an inverted temperature contrast between Earth surfaces and clouds.

    Subsequent cloud top height evaluation took into account the derived information about the cloud detection limits. It was shown that this has fundamental importance for the achieved results. An overall bias of −274 m was achieved compared to a bias of −2762 m if no measures were taken to compensate for cloud detection limitations. Despite this improvement it was concluded that high-level clouds still suffer from substantial height underestimations while the opposite is true for low-level (boundary layer clouds.

    The validation method and the specifically collected satellite dataset with optimal matching in time and space are suggested for a wider use in the future for evaluation of other cloud retrieval methods based on passive satellite imagery.

  15. Effects of limestone quarrying and cement-plant operations on runoff and sediment yields in the Upper Permanente Creek basin, Santa Clara County, California

    Science.gov (United States)

    Nolan, K.M.; Hill, B.R.

    1989-01-01

    High sediment loads below headwater areas of the Permanente Creek drainage basin, Santa Clara County, California, have caused flood-control problems in downstream lowland areas. Measured sediment yields in Permanente Creek, which drains areas affected by limestone quarrying and cement-plant operations, were 14 times greater than yields from the West Fork Permanente Creek, which primarily drains parkland. Part of this large disparity in yields is the result of higher runoff/unit of drainage area in the Permanente Creek Basin. Results of rainfall-runoff modeling indicate that the tendency for higher runoff from Permanente Creek results from natural differences in basin physiography. Runoff during periods of high streamflow (when most sediment is transported) is dominated by subsurface flow, which is not affected by human activities. Although artificial features created by human activities seem to have had only minor effects on runoff, they apparently have had major effects on sediment availability. Artificial features accounted for 273 acres (89%) of the 307 acres of active erosional landforms mapped in 1984. Increased availability of sediment in the Permanente Creek basin appears to be indicated by elevated intercepts of sediment-transport curves. A comparison of sediment-transport curves for the West Fork Permanente Creek with similar curves for the Permanente Creek basin under natural conditions suggests that the sediment yield from Permanente Creek is about 3.5 times higher than it would be under natural basin conditions. The increased yield apparently is due to an increase in sediment availability rather than an increase in runoff. (USGS)

  16. CARCINOMA ODONTOGÉNICO DE CELULAS CLARAS. ESTUDIO CLÍNICO, RADIOLÓGICO Y PATOLÓGICO DE UN CASO.

    Directory of Open Access Journals (Sweden)

    Rosaura Rodríguez Flores

    2004-01-01

    Full Text Available Los tumores odontogénicos (TO son un grupo complejo y poco frecuente de neoplasias con características clínicas, radiológicas, histopatológicas y evolución muy variables. El Carcinoma odontogénico de células claras (COCC es una neoplasia maligna, de comportamiento agresivo variable que se presenta en maxilares. Histológicamente se constituye de nidos de células, frecuentemente de citoplasma claro, rico en glucógeno, rodeadas por bandas de colágena. Pertenece al grupo de los tumores odontogénicos epiteliales malignos. Se presenta el caso de un hombre de 57 años con un tumor en hueso y seno maxilar izquierdo, sometido a hemimaxilectomía subtotal izquierda. Los estudios de imagen demostraron una lesión destructiva mixta en maxilar y seno maxilar izquierdo y la histología reveló la imagen clásica de COCC y la inmunohistoquímica mostró inmunoreactividad para Queratina AE1/AE3, EMA y S-100 (focal. Se demostró abudante glucógeno mediante la reacción de PAS en el citoplasma de las células neoplásicas. El paciente ha tenido seguimiento por 5 años y está asintomático después de la cirugía sin tratamiento complementario con radioterapia.

  17. ¿Favoritas de la corona? Los amores del rey y la promoción de la orden de Santa Clara en Castilla (ss. XIII-XIV

    Directory of Open Access Journals (Sweden)

    Graña Cid, María del Mar

    2014-06-01

    Full Text Available The promotion of female mendicant houses by the kings of Castile offers a typology of “partnering foundations” associated with women. Alfonso X and Pedro I collaborated with their lovers, Mayor Guillén and María de Padilla, and the latter also with his daughters, Beatriz and Isabel, in order to create monasteries of the Order of Saint Clare or its previous forms. These pages analyse the foundational processes that connect the familiar with the political and the personal, offer visible forms of interaction between sexes and reveal some of the physiognomies adopted by the nuns that constituted an exclusively female religious order in which women acted as its main historical agents.En la política de promoción de las monjas mendicantes que desarrollaron los reyes de Castilla se percibe una tipología de “fundaciones en relación” con mujeres. Alfonso X y Pedro I colaboraron con sus amantes, Mayor Guillén y María de Padilla, y el segundo también con sus hijas, Beatriz e Isabel, para dar origen a monasterios de la Orden de Santa Clara o de sus formas previas. Estas páginas analizan unos procesos de fundación que enlazan lo personal y lo familiar con lo político, visibilizan formas de interacción entre los sexos y desvelan algunas de las fisonomías adoptadas por las religiosas que constituyeron la institución clarisa, una orden religiosa exclusivamente femenina en la que tuvieron gran peso las mujeres como agentes históricos.

  18. Short baseline variations in site response and wave-propagation effects and their structural causes: Four examples in and around the santa clara valley, California

    Science.gov (United States)

    Hartzell, S.; Ramirez-Guzman, L.; Carver, D.; Liu, P.

    2010-01-01

    Ground motion records of local and regional events from a portable array are used to investigate the structural causes of variations in ground motion over distances of a few hundred meters to a few kilometers in the sedimentary basin environment of the Santa Clara Valley, California, and its margins. Arrays of portable seismic stations are used to target four study areas with different ground motion patterns: (1) an edge of the alluvial basin extending up onto a marginal ridge (Blossom Hill), (2) a Cenozoic basin with a nearly flat bottom (Cupertino Basin), (3) a long, narrow Cenozoic basin with a steep V profile (Evergreen Basin), and (4) a line perpendicular to the trace of the Hayward fault. Average peak velocities on Blossom Hill from local earthquakes are a factor of 2.5 times higher than nearby valley sites. Three-dimensional (3D) modeling is used to conclude that the majority of the amplification is due to lower shear-wave velocities along a local fault zone (Shannon–Berrocal). Site amplification over the Cupertino Basin in the frequency band 0.5–4 Hz is generally low (less than 2.0 relative to a Mesozoic rock site) and spatially uniform. This response is attributed to the shallow, flat-bottomed shape of the basin and the uniform, flat-laying sedimentary fill. In contrast, site amplification in the Evergreen Basin generally exceeds 3.0 and is attributed to the deep, V-shaped geometry of the basin and younger sedimentary fill. 3D waveform modeling shows the elongated shape of the Evergreen Basin causes more efficient trapping of long-period waves for sources along the long axis of the basin. A low-velocity zone is postulated along the Hayward fault with a width between 100 and 200 m, based on elevated site response along the fault trace and 4.5-Hz fault zone guided waves on the horizontal components of stations near the fault.

  19. Long-term and seasonal ground deformation in the Santa Clara Valley, California, revealed by multi decadal InSAR time series

    Science.gov (United States)

    Chaussard, E.; Burgmann, R.; Shirzaei, M.; Baker, B.

    2013-12-01

    The Santa Clara Valley, California, is a shallow basin located between the San Andreas and Hayward-Calaveras fault zones. The Valley is known to experience land subsidence and uplift related to groundwater extraction and recharge. We use Small Baseline (SB) Interferometric Synthetic Aperture Radar (InSAR) time series to precisely map time-dependent ground deformation at the scale of the basin, relying on data sets from 4 satellites (ERS1, ERS2, Envisat, and ALOS1) to cover a twenty-year time period (1992-2012). The ground deformation map produced provides constraints on the lateral distribution of water-bearing units in the valley, information that is critical to effectively manage groundwater resources, and on the areas more likely to experience subsidence related ground deformation or flooding. Multi-year and seasonal time-series reveal different ground deformation patterns. Long-term uplift at few millimeters per year dominates east of the Silver Creek fault (SCF) and likely relates to the poroelastic response of the confined aquifer to recovery of groundwater levels since the 1960s. In contrast seasonal uplift and subsidence in winter and summer, respectively, dominate west of the SCF, near San Jose. We compare the InSAR derived deformation to precipitation and well data to explain this seasonal variability. The differential subsidence across the SCF indicates that the fault partitions the shallow confined aquifer and was likely active since the deposition of these Holocene sediments. Relying on the multiple viewing geometries from the different spacecraft we isolate a narrow band of horizontal deformation in the immediate vicinity of the SCF. This zone of high extensional strain is due to the localized differential subsidence and is likely to experience fissuring.

  20. Geologic, water-chemistry, and hydrologic data from multiple-well monitoring sites and selected water-supply wells in the Santa Clara Valley, California, 1999-2003

    Science.gov (United States)

    Newhouse, M.W.; Hanson, R.T.; Wentworth, C.M.; Everett, Rhett; Williams, C.F.; Tinsley, J.C.; Noce, T.E.; Carkin, B.A.

    2004-01-01

    To better identify the three-dimensional geohydrologic framework of the Santa Clara Valley, lithologic, geologic, geophysical, geomechanical, hydraulic, and water-chemistry data were collected from eight ground-water multiple-well monitoring sites constructed in Santa Clara County, California, as part of a series of cooperative studies between the U.S. Geological Survey and the Santa Clara Valley Water District. The data are being used to update and improve the three-dimensional geohydrologic framework of the basin and to address issues related to water supply, water chemistry, sequence stratigraphy, geology, and geological hazards. This report represents a compilation of data collected from 1999 to 2003, including location and design of the monitoring sites, cone penetrometer borings, geologic logs, lithologic logs, geophysical logs, core analysis, water-chemistry analysis, ground-water-level measurements, and hydraulic and geomechanical properties from wells and core samples. Exploratory cone penetrometer borings taken in the upper 17 to 130 feet at six of the monitoring sites identified the base of Holocene as no deeper than 75 feet in the central confined area and no deeper than 35 feet in the southern unconfined areas of the valley. Generalized lithologic characterization from the monitoring sites indicates about four to six different aquifer units separated by relatively fine-grained units occur within the alluvial deposits shallower than 860 feet deep. Analysis of geophysical logs indicates that coarse-grained units varied in thickness between 10 and 25 feet in the southeastern unconfined area of the valley and between 50 and 200 feet in the south-central and southwestern areas of the valley. Deviations from temperature-gradient logs indicate that the majority of horizontal ground-water flow occurs above a depth of 775 feet in the south central and above 510 feet in the southeastern areas of the valley. Bulk physical properties from more than 1,150 feet of

  1. Evaluación y modificación del Sistema de Tratamiento de Aguas Residuales de la Planta de Matanza del ITCR en Santa Clara, San Carlos

    Directory of Open Access Journals (Sweden)

    Alma Deloya Martínez

    2006-05-01

    Full Text Available La planta de matanza de ganado vacuno y porcino del ITCR, Sede San Carlos, en Santa Clara, procesa en promedio 23 reses y 11 cerdos por día. El caudal de aguas residuales promedio generado durante el proceso de matanza varió de un máximo de 72 m3/día hasta un mínimo de 12 m3/día. Las aguas residuales son tratadas en un sistema de tratamiento biológico anaerobio, para controlar la contaminación del agua, según el Reglamento de vertido y reúso de aguas residuales. El sistema original consistió en un tanque de aireación y un sedimentador integrado al tanque de aireación. La aireación se suministraba por rotores mecánicos. Durante el desarrollo del proyecto, se encontró que el principal problema en la operación y control del sistema eran los sólidos suspendidos totales y los sólidos sedimentables, no presentándose problemas de calidad del efluente en términos de DBO, DQO y otros parámetros. Para solucionar el problema de los sólidos, en el efluente del sistema de tratamiento se modificó el sistema aerobio existente a un sistema anaerobio (para reducir la producción de sólidos, usando como ayuda del tratamiento un compuesto biológico, que actúa como floculante y coagulante, lo que mejora la sedimentación de los sólidos. Con la modificación del sistema, se alcanzaron eficiencias de remoción de los sólidos sedimentables en un 95%, de la demanda bioquímica de oxígeno DBO en un 83% y la DQO en un 75%, cumpliéndose con la normativa para todos los parámetros exigidos por el Ministerio de Salud.

  2. Ciliate and mesozooplankton community response to increasing CO2 levels in the Baltic Sea: insights from a large-scale mesocosm experiment

    Science.gov (United States)

    Lischka, Silke; Bach, Lennart T.; Schulz, Kai-Georg; Riebesell, Ulf

    2017-01-01

    Community approaches to investigating ocean acidification (OA) effects suggest a high tolerance of micro- and mesozooplankton to carbonate chemistry changes expected to occur within this century. Plankton communities in the coastal areas of the Baltic Sea frequently experience pH variations partly exceeding projections for the near future both on a diurnal and seasonal basis. We conducted a large-scale mesocosm CO2 enrichment experiment ( ˜ 55 m3) enclosing the natural plankton community in Tvärminne-Storfjärden for 8 weeks during June-August 2012 and studied community and species-taxon response of ciliates and mesozooplankton to CO2 elevations expected for this century. In addition to the response to fCO2, we also considered temperature and chlorophyll a variations in our analyses. Shannon diversity of ciliates significantly decreased with fCO2 and temperature with a greater dominance of smaller species. The mixotrophic Myrionecta rubra seemed to indirectly and directly benefit from higher CO2 concentrations in the post-bloom phase through increased occurrence of picoeukaryotes (most likely Cryptophytes) and Dinophyta at higher CO2 levels. With respect to mesozooplankton, we did not detect significant effects for either total abundance or for Shannon diversity. The cladocera Bosmina sp. occurred at distinctly higher abundance for a short time period during the second half of the experiment in three of the CO2-enriched mesocosms except for the highest CO2 level. The ratio of Bosmina sp. with empty to embryo- or resting-egg-bearing brood chambers, however, was significantly affected by CO2, temperature, and chlorophyll a. An indirect CO2 effect via increased food availability (Cyanobacteria) stimulating Bosmina sp. reproduction cannot be ruled out. Although increased regenerated primary production diminishes trophic transfer in general, the presence of organisms able to graze on bacteria such as cladocerans may positively impact organic matter transfer to higher

  3. Sítio Arqueológico Ruínas da Estância Santa Clara: uma unidade doméstica da Fronteira Oeste/RS

    OpenAIRE

    Jaqueline Ferreira Pes

    2013-01-01

    Este trabalho visa apresentar as pesquisas realizadas no sítio arqueológico histórico Ruínas da Estância Santa Clara, um estabelecimento rural localizado no município de Quaraí/RS, fronteira com Artigas no Uruguai. As intervenções de campo foram efetivadas no ano de 2009 e 2011, dando continuidade ao projeto Salamanca desenvolvido pelo Laboratório de Estudos e Pesquisas Arqueológicas da Universidade Federal de Santa Maria, que visa resgatar e valorizar o patrimônio arqueológ...

  4. Sulphur-cycling bacteria and ciliated protozoans in a Beggiatoaceae mat covering organically enriched sediments beneath a salmon farm in a southern Chilean fjord.

    Science.gov (United States)

    Aranda, Carlos P; Valenzuela, Cristian; Matamala, Yessica; Godoy, Félix A; Aranda, Nicol

    2015-11-15

    The colourless mat covering organically enriched sediments underlying an intensive salmon farm in Estero Pichicolo, southern Chile, was surveyed by combined 454 PyroTag and conventional Sanger sequencing of 16S/18S ribosomal RNA genes for Bacteria and Eukarya. The mat was dominated by the sulphide-oxidizing bacteria (SOB) Candidatus Isobeggiatoa, Candidatus Parabeggiatoa and Arcobacter. By order of their abundances, sulphate-reducing bacteria (SRB) were represented by diverse deltaproteobacterial Desulfobacteraceae, but also within Desulfobulbaceae, Desulfuromonadaceae and Desulfovibrionaceae. The eukaryotic PyroTags were dominated by polychaetes, copepods and nematodes, however, ciliated protozoans were highly abundant in microscopy observations, and were represented by the genera Condylostoma, Loxophyllum and Peritromus. Finally, the abundant Sulfurimonas/Sulfurovum also suggest the occurrence of zero-valence sulphur oxidation, probably derived from Beggiatoaceae as a result of bacteriovorus infaunal activity or generated as free S(0) by the Arcobacter bacteria. The survey suggests an intense and complex sulphur cycle within the surface of salmon-farm impacted sediments.

  5. Description of the rare marine ciliate, Uronychia multicirrus song, 1997 (Ciliophora; Euplotida) based on morphology, morphogenesis and SS rRNA gene sequence.

    Science.gov (United States)

    Shen, Zhuo; Shao, Chen; Gao, Shan; Lin, Xiaofeng; Li, Jiqiu; Hu, Xiaozhong; Song, Weibo

    2009-01-01

    A population of the marine euplotid ciliate, Uronychia multicirrus Song 1997, found in the littoral zone of the Daya Bay, Guangdong, South China, was investigated using live observation and protargol impregnation method. This species is diagnosed by possessing a long row of ventral cirri, which has never been seen in all other known congeners. Divisional process, described based on protargol-impregnated specimens, is typical of the genus regarding its general pattern: (1) the oral primordia in both proter and opisthe develop de novo in two subcortical pouches, while the UM-anlage forms de novo (i.e. does not develop from the oral primordium); (2) five frontoventral-transverse (FVT)-cirral anlagen develop in a primary-mode on the cell surface, and almost all the cirri are derived from the FVT-anlagen, except the first frontal cirri, which are formed de novo in both dividers; (3) the species characteristic ventral row derives from the right-most FVT-anlage; (4) the parental structures do not take part in the construction of the marginal anlagen, and (5) the caudal cirri originate in the right-most two dorsal kineties in a multi-segmentation mode. The small subunit rRNA gene of U. multicirrus (GenBank accession number: EU267929) is 1,773 bp and differs by 0.9-1.41% from its closely related congeners.

  6. The use of protozoa in ecotoxicology: application of multiple endpoint tests of the ciliate E. crassus for the evaluation of sediment quality in coastal marine ecosystems.

    Science.gov (United States)

    Gomiero, A; Dagnino, A; Nasci, C; Viarengo, A

    2013-01-01

    Despite an increasing number of surveys describing adverse effects of contaminated sediments on marine organisms, few studies have addressed protists. In this study, the free-crawling marine ciliate Euplotes crassus was evaluated as the test organism for the screening of sediment toxicity using sediments from both coastal and estuarine sites of the Venice Lagoon (Marghera harbour [MH], Valle Millecampi [MV], Murano island [MI] and Lido inlet [LI]). Two endpoints of high ecological value, mortality (Mry) and replication rate (RpR), were assessed in combination with the two sublethal biomarkers of stress, endocytotic rate (Ecy) and lysosomal membrane stability (NRRT). The results showed a significant inhibition of RpR, Ecy and NRRT paralleled by a small and insignificantly increased Mry of the exposed specimens. Our results thus demonstrate that only a combination of mortality and sublethal biomarkers was able to characterise an exposure-related stress syndrome. The suite of biomarkers described here was also able to detect and resolve a pollution-induced stress syndrome at an early stage of pollution. The contamination level of the sediments was assessed using chemical analysis, by estimating bioavailability and by computing a toxic pressure coefficient (TPC) to account for potential additive effects of different pollutants. The observed biological responses were consistent with the contamination levels in sediments, suggesting a high potential for using Protozoa in bioassays to assess environmental risk in coastal marine systems.

  7. The water-borne protein signals (pheromones) of the Antarctic ciliated protozoan Euplotes nobilii: structure of the gene coding for the En-6 pheromone.

    Science.gov (United States)

    La Terza, Antonietta; Dobri, Nicoleta; Alimenti, Claudio; Vallesi, Adriana; Luporini, Pierangelo

    2009-01-01

    The marine Antarctic ciliate, Euplotes nobilii, secretes a family of water-borne signal proteins, denoted as pheromones, which control vegetative proliferation and mating in the cell. Based on the knowledge of the amino acid sequences of a set of these pheromones isolated from the culture supernatant of wild-type strains, we designed probes to identify their encoding genes in the cell somatic nucleus (macronucleus). The full-length gene of the pheromone En-6 was determined and found to contain an open-reading frame specific for the synthesis of the En-6 cytoplasmic precursor (pre-pro-En-6), which requires 2 proteolytic cleavages to remove the signal peptide (pre) and the prosegment before secretion of the mature protein. In contrast to the sequence variability that distinguishes the secreted pheromones, the pre- and pro-sequences appear to be tightly conserved and useful for the construction of probes to clone every other E. nobilii pheromone gene. Potential intron sequences in the coding region of the En-6 gene imply the synthesis of more En-6 isoforms.

  8. The protein pheromone Er-1 of the ciliate Euplotes raikovi stimulates human T-cell activity: involvement of interleukin-2 system.

    Science.gov (United States)

    Cervia, Davide; Catalani, Elisabetta; Belardinelli, Maria Cristina; Perrotta, Cristiana; Picchietti, Simona; Alimenti, Claudio; Casini, Giovanni; Fausto, Anna Maria; Vallesi, Adriana

    2013-02-01

    Water-soluble protein signals (pheromones) of the ciliate Euplotes have been supposed to be functional precursors of growth factors and cytokines that regulate cell-cell interaction in multi-cellular eukaryotes. This work provides evidence that native preparations of the Euplotes raikovi pheromone Er-1 (a helical protein of 40 amino acids) specifically increases viability, DNA synthesis, proliferation, and the production of interferon-γ, tumor necrosis factor-α, interleukin (IL)-1β, IL-2, and IL-13 in human Jurkat T-cells. Also, Er-1 significantly decreases the mRNA levels of the β and γ subunits of IL-2 receptor (IL-2R), while the mRNA levels of the α subunit appeared to be not affected. Jurkat T-cell treatments with Er-1 induced the down-regulation of the IL-2Rα subunit by a reversible and time-dependent endocytosis, and increased the levels of phosphorylation of the extracellular signal-regulated kinases (ERK). The cell-type specificity of these effects was supported by the finding that Er-1, although unable to directly influence the growth of human glioma U-373 cells, induced Jurkat cells to synthesize and release factors that, in turn, inhibited the U-373 cell proliferation. Overall, these findings imply that Er-1 coupling to IL-2R and ERK immuno-enhances T-cell activity, and that this effect likely translates to an inhibition of glioma cell growth.

  9. Phylogeny and establishment of a new ciliate family, Wilbertomorphidae fam. nov. (Ciliophora, Karyorelictea), a highly specialized taxon represented by Wilbertomorpha colpoda gen. nov., spec. nov.

    Science.gov (United States)

    Xu, Yuan; Li, Jiamei; Song, Weibo; Warren, Alan

    2013-01-01

    The morphology and molecular phylogeny of a new marine interstitial karyorelictean ciliate, Wilbertomorpha colpoda gen. nov., spec. nov., isolated from a sandy beach at Qingdao, China, are investigated. The ciliature is mainly on the right surface with the left surface barren except for a single marginal kinety, which is typical of the order Loxodida. Nevertheless, other morphological features, such as the highly reduced buccal structure, the absence of a buccal cavity and the presence of extremely specialized cortical granules, prevent its assignation to any known family. Furthermore, the secondary structure of the variable region 2 of the SSU rRNA gene is unique among loxodids. Thus, we establish a new family, Wilbertomorphidae fam. nov. for the genus Wilbertomorpha. Phylogenetic analyses based on SSU rRNA gene sequence data suggest that this taxon is a sister group to the family Geleiidae which belongs to the order Protoheterotrichida. However, morphologically Wilbertomorpha bears a much stronger resemblance to Loxodidae which belongs to the order Loxodida. Based on these findings, we tentatively place Wilbertomorphidae nov. fam. incertae sedis within Karyorelictea.

  10. 纤毛类原生动物中宿主-共生体系统的研究%Studies on the Host-Symbiont System in Ciliates

    Institute of Scientific and Technical Information of China (English)

    顾福康; 孙军; 何远; 田沁

    2001-01-01

    目前已经在100多种纤毛虫中观察到细菌、藻类和其他微生物等共生体。对纤毛虫中宿主-共生体系统的研究表明,双小核草履虫中卡巴粒的遗传为细胞质遗传理论提供了例证;含细菌共生体的许多厌氧纤毛虫无线粒体,共生体对宿主代谢有重要作用;尾草履虫-钝状全孢螺菌共生作用中,共生菌感染形式的39kDa、15kDa周质蛋白可分别与IF-3-1、IF-3-2两种单抗反应,其共生体早期感染过程中两种抗原的量发生显著变化,并且共生体生殖 形式选择性地合成63kDa蛋白质,该蛋白质可能是与共生作用有联系的关键分子;绿草履虫-小球藻共生系统中,共生藻中存在葡糖胺硬性壁是其与草履虫发生共生关系的基本条件,其中,共生藻参与宿主代谢,与宿主形成相互受益的专一性关系,并且藻类共生体的作用可能影响了宿主草履虫基因组有关结构,改变了其基因表达。作者推测,探索共生体对宿主基因结构及其表达产物的影响可能是对纤毛虫中共生作用研究的主要趋势,这对于深入了 解真核细胞中宿主-共生体双方的相互作用、物质交流在分子水平上的调控机理、细胞结构与功能的关系等细胞生命活动规律是有意义的。%To date, bacterial,algal and other microbial symbionts have been found in more than 100 species of ciliates. The study of the host-symbiont system in ciliates shows that: ( 1 ) The inheritance of kappa particles in the cytoplasm of Paramecium aurelia is a classic example of the cytoplasmic inheritance theory. (2) Bacterial symbionts in some anerobic ciliates that lack mitochondria play the major role in the host's metabolism. (3) In the P. Caudatum-Holospora obtusa system, 39- and 15-kDa periplasmic pro teins of the infectious H. Obtusa reacted with IF-3-1 and IF-3-2 monoclonal antibodies respectively. The amounts of both antigens were reduced during

  11. Morphology, morphogenesis and small subunit rRNA gene sequence of a soil hypotrichous ciliate, Perisincirra paucicirrata (Ciliophora, Kahliellidae), from the shoreline of the Yellow River, North China.

    Science.gov (United States)

    Li, Fengchao; Xing, Yi; Li, Jiamei; Al-Rasheid, Khaled A S; He, Songke; Shao, Chen

    2013-01-01

    The morphology, morphogenesis, and 18S rRNA gene sequence of a soil hypotrichous ciliate Perisincirra paucicirrata, isolated from north China, were investigated. Perisincirra paucicirrata differs from its congeners in: (1) having a body length to width ratio in vivo of 4:1, (2) its adoral zone occupying between 15% and 25% of the total body length, and (3) the presence of two parabuccal cirri, three left (with 10-16 cirri each) and two right marginal rows (with 14-24 cirri each), and three dorsal kineties. Our study offers a first attempt to begin to map the morphogenetic processes of the genus, which are mainly characterised by the following: the formation of four frontal ventral transverse anlagens for each daughter cell, with the proter's anlage I originating from the reorganised anterior part of the parental paroral; the paroral and endoral anlage developed from the reorganised old endoral and do not contribute the first frontal cirrus; the frontoventral transverse anlage I contributing the left frontal cirrus; anlage II generating the middle frontal and the buccal cirri; anlage III developing the right frontal cirrus and the anterior parabuccal cirrus; and anlage IV contributing the posterior parabuccal cirrus. As an additional contribution, we judge that the inner one or the two right rows of P. kahli and P. longicirrata are marginal rows. Phylogenetic analysis based on SSU rDNA sequences suggests that Perisincirra is related to sporadotrichids, but provides no credible evidence for its taxonomic position.

  12. Morphology and SSU rDNA sequence analysis of two hypotrichous ciliates (Protozoa, Ciliophora, Hypotrichia) including the new species Metaurostylopsis parastruederkypkeae n. sp.

    Science.gov (United States)

    Lu, Borong; Wang, Chundi; Huang, Jie; Shi, Yuhong; Chen, Xiangrui

    2016-10-01

    The morphology and phylogeny of two hypotrichous ciliates, Metaurostylopsis parastruederkypkeae n. sp. and Neourostylopsis flavicana (Wang et al., 2011) Chen et al., 2013 were investigated based on morphology, infraciliature and the small subunit (SSU) ribosomal RNA gene (rRNA) sequence. The new species, M. parastruederkypkeae n. sp. was identified according to its characteristics: body shape ellipsoidal, size about (165-200) × (45-60) μm in vivo, cell color reddish; two types of cortical granules including wheat grain-like and yellow-greenish larger ones along the marginal cirri rows and dorsal kineties and dot-like and reddish smaller ones, grouped around marginal cirri on ventral side and arranged in short lines on dorsal side; 26-41 adoral membranelles; three frontal and one parabuccal, five to seven frontoterminal, one buccal, and three to six transverse cirri; seven to thirteen midventral pairs; five to nine unpaired ventral cirri, five to seven left and three to five right marginal rows; and three complete dorsal kineties. Phylogenetic analysis based on SSU rDNA sequences showed that both Metaurostylopsis and Neourostylopsis are monophyletic. As the internal relationship between and within both genera are not clear, further studies on the species in these two genera are necessary. The key characteristics of all known twelve Metaurostylopsis-Apourostylopsis-Neourostylopsis species complex were updated.

  13. Morphology of four new solitary sessile peritrich ciliates from the Yellow Sea, China, with description of an unidentified species of Paravorticella (Ciliophora, Peritrichia).

    Science.gov (United States)

    Sun, Ping; Al-Farraj, Saleh A; Warren, Alan; Ma, Honggang

    2017-02-01

    Sessile peritrichs are a large assemblage of ciliates that have a wide distribution in soil, freshwater and marine waters. Here, we document four new and one unidentified species of solitary sessile peritrichs from aquaculture ponds and coastal waters of the northern Yellow Sea, China. Based on their living morphology, infraciliature and silverline system, four of the five forms were identified as new members belonging to one of three genera, Vorticella, Pseudovorticella and Scyphidia, representing two families, Vorticellidae and Scyphidiidae. The other isolate was found to be an unidentified species of the poorly known genus Paravorticella. Vorticella chiangi sp. nov. is characterized by its inverted bell-shaped zooid, short row 3 in infundibular polykinety 3 and marine habitat. Pseudovorticella liangae sp. nov. posseses a thin, broad peristomial lip and a granular pellicle. Pseudovorticella haiboensis sp. nov. is differentiated from its congeners by having an elongated zooid that is covered by a layer of thin pellicular vesicles, and two rows of kineties in infundibular polykinety 3. Scyphidia perezuzae sp. nov. and Paravorticella sp. are stalkless ectoparasites or ectocommensals of aquatic animals. The former has a short, plump body, a narrow peristomial lip and a conspicuous, flattened, disc-shaped scopula for adhesion. Paravorticella sp. has an extremely elongated clavate body, a broad peristomial lip, and a narrow scopula.

  14. Isolation and characterization of latent and active polyphenoloxidase in BRS Clara (CNPUV 154-147 × Centennial seedless) and BRS Morena (Marroo seedless × Centennial seedless) seedless table grapes.

    Science.gov (United States)

    Lago-Vanzela, Ellen Silva; Pavezzi, Fabiana Carina; Martin, Natália; Gomes, Eleni; Da Silva, Roberto

    2011-11-01

    The seedless grapes BRS Clara and BRS Morena, developed in Brazil, are currently growing in popularity due to their premium texture and taste. However, there are no reports on the polyphenoloxidase (PPO) from these cultivars. In this paper, active and latent PPO from BRS Clara and BRS Morena seedless grapes were extracted using the non-ionic detergents Triton-X-100 (active) and Triton-X-114 (latent), and their catecholase activities were characterized. The PPO extracted using Triton-X-110 exhibited maximum activities at pH 6.0 and at 25 °C. Above 30 °C, a gradual decline in activities was noted, with complete inactivation at 60 °C. The PPO from grapes extracted with Triton-X-114 was activated with 0.2% of the ionic detergent sodium dodecyl sulfate (SDS), and exhibited maximum activities at pH 5.5 and at 30 °C. It was stable until the temperature reached 60 °C.

  15. La estria supranuclear de las células ciliadas en la rinitis alérgica Supranuclear stria of ciliated cells in allergic rhinitis

    Directory of Open Access Journals (Sweden)

    Ana Zerdiew

    2007-08-01

    Full Text Available Se estudiaron 80 pacientes adultos alérgicos, que cursaron con los siguientes cuadros clínicos: 16 casos de rinitis intermitente y 64 de rinitis persistente. Se realizó el recuento porcentual de la estría supranuclear de las células ciliadas, respecto de los leucocitos presentes en los extendidos obtenidos por toma endonasal. Con los datos obtenidos se clasificaron los extendidos en 4 grupos; Grupo A (N=23: predominio leucocitario eosinófilo con eosinofilia nasal >10%, Grupo B (N=15: abundantes leucocitos neutrófilos y eosinofilia nasal >10%, Grupo C (N=29: con escasos leucocitos, Grupo D (N=13: con abundantes leucocitos de predominio neutrófilo sin eosinofilia. Se observó que el incremento porcentual de estría supranuclear se correlacionó con eosinofilia nasal >10% y con las muestras que presentaron escasos leucocitos. Sin embargo se evidenció una marcada disminución del porcentaje de estría supranuclear en la leucocitosis neutrófila de etiología bacteriana.Nasal secretions were studied in 80 allergic adults patients: 16 with intermittent rhinitis and 64 with persistent rhinitis. The percentage of supranuclear stria of ciliated cells with regard to leucocytes was studied by nasal scraping. Four groups of patients were classified according to nasal leucocytic predominance: patients with eosinophilic predominance with eosinophils > 10% in Group A (N=23, patients with abundant neutrophils and eosinophils >10% in Group B (N=15, patients with scant leucocytes in Group C (N=29, patients with neutrophilic predominance without eosinophils in Group D (N=13. An increase of supranuclear stria percentage was correlated to eosinophils > 10% and also correlated to scant leucocytes. Nevertheless, a significant decrease of supranuclear stria percentage was observed in neutrophilic leukocytosis of bacterial etiology.

  16. Role of four conserved aspartic acid residues of EF-loops in the metal ion binding and in the self-assembly of ciliate Euplotes octocarinatus centrin.

    Science.gov (United States)

    Liu, Wen; Duan, Lian; Sun, Tijian; Yang, Binsheng

    2016-12-01

    Ciliate Euplotes octocarinatus centrin (EoCen) is an EF-hand calcium-binding protein closely related to the prototypical calcium sensor protein calmodulin. Four mutants (D37K, D73K, D110K and D146K) were created firstly to elucidate the importance of the first aspartic acid residues (Asp37, Asp73, Asp110 and Asp146) in the beginning of the four EF-loops of EoCen. Aromatic-sensitized Tb(3+) fluorescence indicates that the aspartic acid residues are very important for the metal-binding of EoCen, except for Asp73 (in EF-loop II). Resonance light scattering (RLS) measurements for different metal ions (Ca(2+) and Tb(3+)) binding proteins suggest that the order of four conserved aspartic acid residues for contributing to the self-assembly of EoCen is Asp37 > Asp146 > Asp110 > Asp73. Cross-linking experiment also exhibits that Asp37 and Asp146 play critical role in the self-assembly of EoCen. Asp37, in site I, which is located in the N-terminal domain, plays the most important role in the metal ion-dependent self-assembly of EoCen, and there is cooperativity between N-terminal and C-terminal domain (especially the site IV). In addition, the dependence of Tb(3+) induced self-assembly of EoCen and the mutants on various factors, including ionic strength and pH, were characterized using RLS. Finally, 2-p-toluidinylnaphthalene-6-sulfonate (TNS) binding, ionic strength and pH control experiments indicate that in the process of EoCen self-assembly, molecular interactions are mediated by both electrostatic and hydrophobic forces, and the hydrophobic interaction has the important status.

  17. The protein pheromone Er-1 of the ciliate Euplotes raikovi stimulates human T-cell activity: Involvement of interleukin-2 system

    Energy Technology Data Exchange (ETDEWEB)

    Cervia, Davide, E-mail: d.cervia@unitus.it [Department for Innovation in Biological, Agro-food and Forest systems (DIBAF), University of Tuscia, Viterbo (Italy); Department of Biomedical and Clinical Sciences, “Luigi Sacco” University Hospital, University of Milan, Milano (Italy); Catalani, Elisabetta; Belardinelli, Maria Cristina [Department for Innovation in Biological, Agro-food and Forest systems (DIBAF), University of Tuscia, Viterbo (Italy); Perrotta, Cristiana [Department of Biomedical and Clinical Sciences, “Luigi Sacco” University Hospital, University of Milan, Milano (Italy); Picchietti, Simona [Department for Innovation in Biological, Agro-food and Forest systems (DIBAF), University of Tuscia, Viterbo (Italy); Alimenti, Claudio [Department of Environmental and Natural Sciences, University of Camerino, Camerino (Italy); Casini, Giovanni; Fausto, Anna Maria [Department for Innovation in Biological, Agro-food and Forest systems (DIBAF), University of Tuscia, Viterbo (Italy); Vallesi, Adriana [Department of Environmental and Natural Sciences, University of Camerino, Camerino (Italy)

    2013-02-01

    Water-soluble protein signals (pheromones) of the ciliate Euplotes have been supposed to be functional precursors of growth factors and cytokines that regulate cell–cell interaction in multi-cellular eukaryotes. This work provides evidence that native preparations of the Euplotes raikovi pheromone Er-1 (a helical protein of 40 amino acids) specifically increases viability, DNA synthesis, proliferation, and the production of interferon-γ, tumor necrosis factor-α, interleukin (IL)-1β, IL-2, and IL-13 in human Jurkat T-cells. Also, Er-1 significantly decreases the mRNA levels of the β and γ subunits of IL-2 receptor (IL-2R), while the mRNA levels of the α subunit appeared to be not affected. Jurkat T-cell treatments with Er-1 induced the down-regulation of the IL-2Rα subunit by a reversible and time-dependent endocytosis, and increased the levels of phosphorylation of the extracellular signal-regulated kinases (ERK). The cell-type specificity of these effects was supported by the finding that Er-1, although unable to directly influence the growth of human glioma U-373 cells, induced Jurkat cells to synthesize and release factors that, in turn, inhibited the U-373 cell proliferation. Overall, these findings imply that Er-1 coupling to IL-2R and ERK immuno-enhances T-cell activity, and that this effect likely translates to an inhibition of glioma cell growth. -- Highlights: ► Euplotes pheromone Er-1 increases the growth of human Jurkat T-cells. ► Er-1 increases the T-cell production of specific cytokines. ► Er-1 activates interleukin-2 receptor and extracellular signal-regulated kinases. ► The immuno-enhancing effect of Er-1 on Jurkat cells translates to an inhibition of human glioma cell growth.

  18. Genome-wide identification and evolution of ATP-binding cassette transporters in the ciliate Tetrahymena thermophila: A case of functional divergence in a multigene family

    Directory of Open Access Journals (Sweden)

    Yuan Dongxia

    2010-10-01

    Full Text Available Abstract Background In eukaryotes, ABC transporters that utilize the energy of ATP hydrolysis to expel cellular substrates into the environment are responsible for most of the efflux from cells. Many members of the superfamily of ABC transporters have been linked with resistance to multiple drugs or toxins. Owing to their medical and toxicological importance, members of the ABC superfamily have been studied in several model organisms and warrant examination in newly sequenced genomes. Results A total of 165 ABC transporter genes, constituting a highly expanded superfamily relative to its size in other eukaryotes, were identified in the macronuclear genome of the ciliate Tetrahymena thermophila. Based on ortholog comparisons, phylogenetic topologies and intron characterizations, each highly expanded ABC transporter family of T. thermophila was classified into several distinct groups, and hypotheses about their evolutionary relationships are presented. A comprehensive microarray analysis revealed divergent expression patterns among the members of the ABC transporter superfamily during different states of physiology and development. Many of the relatively recently formed duplicate pairs within individual ABC transporter families exhibit significantly different expression patterns. Further analysis showed that multiple mechanisms have led to functional divergence that is responsible for the preservation of duplicated genes. Conclusion Gene duplications have resulted in an extensive expansion of the superfamily of ABC transporters in the Tetrahymena genome, making it the largest example of its kind reported in any organism to date. Multiple independent duplications and subsequent divergence contributed to the formation of different families of ABC transporter genes. Many of the members within a gene family exhibit different expression patterns. The combination of gene duplication followed by both sequence divergence and acquisition of new patterns of

  19. Moss ciliated protozoa as bioindicators. A study on the urban area of Pisa (Italy); Protozoi ciliati del muschio come biondicatori. Uno studio nell'area urbana di Pisa

    Energy Technology Data Exchange (ETDEWEB)

    Verni, F.; Rosati, G. [Pisa Univ., Pisa (Italy). Dipt. di Etologia, Ecologia, Evoluzione

    2000-07-01

    Samples of moss were collected, every month for 7 months, from five zones of Pisa (S2, S3, S4, S5, S6) and a woody zone (S1) as control. For each sample the type and the number of the ciliate species as well as the number of individuals for each species were determined. Lead content was also measured. The data were statistically elaborated and compared. The diversity Shannon index (H) was calculated to determine the health state of ciliate communities. In any case an inverse correlation between H and the lead content was reported; the highest the H value, the lowest the lead content and vice versa. On the basis of the results here reported the use of Ciliates as biondicators appears suitable for the control of urban soil. An analysis like this appears advantageous as it is rather simple and cheap and allows to determine the possible variations in a real time. [Italian] Sono stati analizzati campioni di muschio prelevati, con cadenza mensile per 7 mesi, in 5 stazioni di Pisa (S2, S3, S4, S5, S6) e da una zona boscosa (S1), come controllo. Per ogni campione si e' proceduto all'identificazione dei Ciliati presenti, al conteggio delle specie e del numero di individui per specie, nonche' alla misurazione del piombo presente. I dati sono stati confrontati dopo elaborazione statistica. L'indice della diversita' di Shannon ha fornito informazioni sulla salute della comunita' dei Protozoi delle varie stazioni. In ogni caso risulta una correlazione inversa tra i valori dell'indice di Shannon e la quantita' di piombo: S5, la stazione piu' esposta al traffico, risulta quella piu' degradata. L'uso dei Ciliati come biondicatori risulta quindi appropriato e vantaggioso considerando che e' semplice, poco costoso e permette di valutare in tempi reali variazioni nell'ambiente.

  20. [Revision of of the subfamily of Metaracoelophryinae de Puytorac 1972 (Oligohymenophora: Hoplytophryida: Hoplytophryidae), astome ciliates of the digestive tract of Oligochaeta worms of Africa: description of five new species].

    Science.gov (United States)

    Fokam, Z; Ngassam, P; Nana, P A; Bricheux, G; Bouchard, P; Sime Ngando, T

    2012-02-01

    Five new species belonging to the astome ciliates, living in the digestive tract of Oligochaeta worms belonging to the genus Alma from Cameroon, have been described. The techniques used are: vital staining, staining of the nucleus with Diamidino Phenyl Indol (DAPI), scanning electron microscopy and silver staining method (Fernandez Galiano, 1976, 1994). This work confirms the presence of the genus Paracoelophrya and Dicoelophrya in the digestive track of the oligochaete Alma from Gabon and Cameroon; it helps to understand the general taxonomy of this Metaracoelophryinae subfamily. Moreover, the homogeneity of this group is confirmed and the phylogenetic relationship inside the Hoplitophryida order need more studies to be solved.

  1. Regulation on the expression of Clara cell secretory protein in the lungs of the rats with acute lung injury by growth hormone

    Institute of Scientific and Technical Information of China (English)

    MIN Jia; LUO Fo-quan; ZHAO Wei-lu

    2012-01-01

    Background Clara cell secretory protein (CC16) is an important lung derived protective factor and may play an important role on the pathogenesis of acute lung injury (ALl) induced by endotoxemia.Growth hormone (GH) is an important anabolism hormone secreted by GH cells of the hypophysis.Pravious research showed that GH would significantly exacerbate ALl induced by endotoxemia,but the mechanism is not very clear yet.Whether the effects are related to CC16 or not is undetermined.Methods One hundred and twelve male Sprague-Dawley rats were randomly divided into an ALl group and a GH group.The rats in the two groups were subdivided into seven subgroups,according to injection with lipopolysaccharides (LPS) or not,then according to different intervals of time after LPS injection; 0 hour (pre-injection of LPS,acted as control group),0.5 hour,1 hour,2 hours,4 hours,6 hours and 24 hours for subgroups.Pulmonary alveolar septa area density (PASAD) and ploymorphonuclear cells (PMN) in the lungs were analyzed morphometrically.The levels of tumor necrosis factor (TNF) and interleukin 6 (1L-6) were determined by radioimmunoassay.To analyze the expression and activation of nuclear factor kappa B (NF-kB),the numbers of NF-kB positive cells in lungs were counted after immunofluorescence staining.and the levels of NF-KB inhibitory protein-α (1KB-α) in lung homogenates of rats were detected by Western blotting.The expression levels of CC16 mRNA in lungs of the rats with ALl were determined by semi-quantitative reverse transcription polymerase chain reaction (RT-PCR).The levels of CC16 protein in lung homogenates were detected by Western blotting.Results Half an hour after LPS injury both the PASAD and PMN numbers in lungs of the rats with ALl began to increase significantly and peaked at 6-hour post-injury.They then began to recover and reached normal levels at 24-hour post-injury.Both the PASAD and PMN numbers in the GH group increased more significantly than those in the ALl group

  2. Análisis espacial del diagnóstico tardío vs. mortalidad: una herramienta para apoyar estudios epidemiológicos sobre el cáncer. Villa Clara. Cuba 2004-2009

    Directory of Open Access Journals (Sweden)

    Oscar Antón Fleites

    2012-01-01

    Full Text Available Fundamento: la tasa de mortalidad por cáncer en Villa Clara, al cierre del 2009, se mantuvo por encima de la media nacional, con ocurrencia significativa de mayor número de casos con diagnóstico tardío en fallecidos que en los sobrevivientes al período de estudio. Objetivo: mostrar las potencialidades del análisis espacio-temporal para identificar conglomerados espaciales y/o espacio-temporales que nos permitan el análisis del diagnóstico tardío como variable explicativa de la mortalidad, de las cinco localizaciones de cánceres bajo programa en la provincia. Métodos: estudio observacional descriptivo, focalizado en la detección de conglomerados espaciales y espacio-temporales del diagnostico tardío del cáncer en Villa Clara, utilizando una técnica estadística de exploración espacio-temporal (SaTScan v7.0.1., la muestra abarcó la totalidad de pacientes diagnosticados durante el año 2004, y de estos, los fallecidos hasta el cierre del año 2009. Resultados: reveló la presencia de conglomerados significativos tanto espaciales como espacio-temporales, de las áreas de mayor riesgo de diagnóstico indeterminado. Conclusiones: demostró ser una buena herramienta para el análisis del diagnóstico tardío del cáncer, y permitió la generación de hipótesis sobre posibles determinantes que ayuden a orientar nuevas investigaciones.

  3. Clara细胞在兔肺缺血再灌注损伤中的作用%Role of Clara cells in lung ischemia-reperfusion injury in rabbits

    Institute of Scientific and Technical Information of China (English)

    李戈辉; 李李; 沈金美; 裴万敏

    2010-01-01

    目的 探讨Clara细胞在兔肺缺血再灌注(IR)损伤中的作用.方法 健康家兔24只.随机分为3组(n=8):假手术组(S组)、IR组、肺Clara细胞剥除+IR组(CIR组).CIR组置于萘气体浓度为89.28 mg/m3的气体箱中12 h,S组和IR组置于无萘气体箱中12 h.取出正常饲养24 h后.IR组和CIR组采用阻断左肺门60 min,再灌注120 min的方法制备肺IR模型,S组不予阻断肺门.于再灌注120 min时采集颈动脉血样5 ml,测定血清TNF-α和总蛋白浓度,收集支气管肺泡灌洗液(BALF),计数WBC、中性粒细胞(PMN),计算PMN百分比,取肺组织测定MDA含量和湿/干重比值(W/D比值),观察病理学改变和Clara细胞的分布情况.结果 S组肺泡完整,肺实质无炎性细胞浸润,可见较多的Clara细胞;IR组肺不张伴肺气肿,肺间质增宽水肿,中度炎性细胞浸润,肺泡腔内有淡黄色渗出,渗出物有WBC,亦可见较多的Clara细胞;CIR组炎性细胞浸润严重,肺泡腔内渗出物多.WBC较多,血管腔变窄,甚至出现无复流现象,Clara细胞少见.与S组比较,IR组和CIR组BALF中WBC计数、PMN百分比、血清TNF-α浓度、肺组织MDA含量及W/D比值升高(P<0.05 );与IR组比较,CIR组BALF中WBC计数、PMN百分比、血清TNF-α浓度、肺组织MDA含量及W/D比值升高(P<0.05).结论 肺IR损伤时兔肺内Clara细胞通过抑制炎性反应产生内源性的保护作用.%Objective To investigate the role of Clara cells in lung ischemia-reperfusion (I/R) injury in rabbits.Methods Twenty-four healthy 10-12 month old rabbits of either sex weighing 1.5-2.0 kg were randomly divided into 3 groups ( n = 8 each) ; group A sham operation (group S) ; group B lung I/R and group C Clara cell elimination+ lung I/R. The animals were anesthetized with iv pentobarbital 30 mg/kg , tracheostomized and mechanically ventilated. In group B and C lung I/R was induced by clamping the left hilum of lung for 60 min followed by 120 min repeffusion. In group C Clara ceils

  4. Protocruzia,a highly ambiguous ciliate(Protozoa;Ciliophora):Very likely an ancestral form for Heterotrichea,Colpodea or Spirotrichea? With reevaluation of its evolutionary position based on multigene analyses

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    Thorsten; STOECK; Shin; Mann; Kyoon; Al-Rasheid; Khaled; A.; S.; Al-Khedhairy; Abdulaziz; A.

    2010-01-01

    The ciliate genus Protocruzia belongs to one of the most ambiguous taxa considering its systematic position,possibly as a member of the classes Heterotrichea,Spirotrichea or Karyorelictea,which is tentatively placed into Spirotrichea in Lynn’s 2008 system.To test these hypotheses,multigene trees(Bayesian inference,evolutionary distance,maximum parsimony,and maximum likelihood) were constructed using the small subunit rRNA(SSU rRNA) gene,internal transcribed spacer 2(ITS2) and a protein coding gene(histone H4).All analyses agree that:(1) four morphotypes of Protocruzia from different geographical origins group together and form a monophyletic clade,which cannot be assigned to any of the eleven described ciliate classes;(2) it is invariably positioned on an isolated branch separated from the class Spirotrichea suggesting that this clade should be clearly removed from Spirotrichea;(3) this leads us to hypothesize that this taxon may indeed represent a lineage on a class rank.Based on the fact that it is,both morphologically and in molecular features,closely related to the heterotrichs,Colpodea and Oligohymenophorea,Protocruziida might be an ancestral form for the subphylum Intramacronucleata in the evolutionary line from the class Heterotrichea(subphylum Postciliodesmatophora) to higher taxa.

  5. ABUNDANCE AND BIOMASS OF COPEPOD NAUPLII AND CILIATES IN JIAOZHOU BAY%胶州湾桡足类幼虫和浮游生纤毛虫的丰度与生物量

    Institute of Scientific and Technical Information of China (English)

    张武昌; 王荣

    2001-01-01

    This paper presents data of ciliates and copepod nauplii abundance and biomass from eight cruises (September, December, 1997; February, April, August, November, 1998; February, May, 1999) in Jiaozhou Bay. Water samples were taken by 2L Niskin Bottles at ten stations during every cruise. One liter water was preserved in plastic bottle with Lugol's (1%). The sample scheme of water layer was surface, middle and bottom according to water depth. The samples were examined with the method of Utermohl (1958) one month after sampling. Carbon:volumn ratio was 0.05 pgC/μm3 for copepod nauplii (Mullin, 1969), 0.19pgC/μm3 for ciliates (Putt et al, 1989). Body volume of tintinnids was assumed to be 50% of that of the lorica (Beers et al, 1969).   Copepod nauplii dominated in September 1997. The aloricate oligotrichous ciliates were dominant through December 1997 to February 1999. Tintinnids dominated in May 1999. The maximum abundance of copepod nauplii, aloricate ciliates and tintinnids were 850 (August, 1998), 21300 (August, 1998) and 1720 ind/L (May, 1999) respectively. The total abundance of the above three in the surface layer was 10—22350 ind/L, with larger abundance in the inner part of the bay. There was no obvious trend in the vertical distribution. The total biomass of copepod nauplii, aloricate ciliates and tintinnids in the surface layer was in the range of 0.10—380.27μgC/L, water column biomass 0.20—1426.02mgC/m2.%1997年9月、12月,1998年2月、4月、8月、11月以及1999年2月和5月在胶州湾采集桡足类幼虫和浮游生纤毛虫的样品。样品用Lugol's试剂固定(最后浓度1%),用显微镜计数桡足类幼虫和浮游生纤毛虫的丰度,并计算总生物量(表层生物量和水体生物量)。桡足类幼虫、无壳纤毛虫和砂壳纤毛虫的最大丰度分别为850ind/L(1998年8月)、21300ind/L(1998年8月)和1720ind/L(1999年5月)。表层的总丰度为10—22630ind/L,水平分布湾内比湾外多。表层纤

  6. A Formação Água Clara na Região de Araçaíba - SP: Registro U-Pb de Uma Bacia Mesoproterozóica

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    Werner Weber

    2004-04-01

    Full Text Available O objetivo deste trabalho fundamenta-se no estudo isotópico dos corpos metabasíticos associados à Formação ÁguaClara e as suas relações com as encaixantes. A Formação Água Clara é constituída predominantemente por uma seqüência derochas carbonáticas (mármores puros a impuros. Rochas cálcio-silicáticas, cálcio xistos, mica xistos, anfibólio xistos, quartzitos,granada-clorita-biotita xistos, metacherts, metatufos básicos e intermediários, metabasitos, anfibolitos e cornubianitos. Asrochas metabásicas estudadas normalmente têm dimensões longitudinais expressivas chegando a quilométricas, com dimensõestransversais de até centenas de metros. São de coloração cinza – esverdeada, apresentam granulometria fina a média etextura normalmente nematoblástica. Ocorrem termos mais isótropos que exibem textura granoblástica. São compostos porpiroxênios (diopsídio ou augita, anfibólios (actinolita e hornblenda e plagioclásios (andesina/oligoclásio. Os acessórios maiscomuns são apatita, magnetita, epidoto, titanita e raramente zircão. Em lâmina observa-se texturas ofíticas e subofíticaspreservadas o que indica uma provável origem ígnea para esses corpos. Os dados geoquímicos sugerem composições semelhantesa basaltos enriquecidos de cadeias mesoceânicas (E-MORB com tendências a basaltos de ilhas oceânicas (OIB. Ascaracterísticas de basaltos toleíticos, subalcalinos semelhantes a basaltos enriquecidos de cadeias mesoceânicas com tendênciaa basaltos de ilhas oceânicas (OIB, permitem sugerir como ambiente geotectônico gerador deste magmatismo básico, ambientesdistensivos ou em bacias de retroarco. Os dados analíticos U-Pb (convencional, EMF e SHRIMP obtidos para oslitotipos metabásicos indicam épocas de cristalização dos zircões e conseqüente formação dessas rochas durante omesoproterozóico, com idades do intervalo 1590 – 1470 Ma. Os valores neoproterozóicos obtidos (~600 Ma

  7. Viscosity of egg white from hens of different strains fed with commercial and natural additives Viscosidade da clara de ovo proveniente de poedeiras de diferentes espécies com aditivos comerciais e naturais

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    Fernanda Papa Spada

    2012-03-01

    Full Text Available Yolk color and egg white (albumen cleanliness and viscosity are important parameters by which consumers judge the quality of eggs. This study aimed to investigate changes in albumen viscosity during storage of eggs for up to 36 days from two different commercial laying hen strains (Carijo Barbada and Isa Brown fed a diet containing annatto (1.5 and 2.0% or a synthetic additive without synthetic colorants (control. Analyses of humidity, albumen height, pH, viscosity, foam formation, and stability were carried out on eggs. Carijo Barbada strain had smaller albumen, lower humidity and higher egg white viscosity than Isa Brown strain; however, with storage, viscosity lowered significantly on both strains. Initially, the addition of 2.0% of annatto or a synthetic additive increased viscosity in both strains, but with storage only the control maintained longer viscosity. Lower viscosity did not change foam density and stability.A coloração da gema, transparência e viscosidade da clara (albúmen são parâmetros importantes que os consumidores consideram na avaliação dos ovos. O objetivo do estudo foi verificar as trocas que ocorrem na armazenagem por 36 dias em relação à viscosidade da clara de ovos produzidos por poedeiras de duas diferentes linhagens (Carijo Barbada eIsa Brown , as quais receberam dietas contendo urucum (1,5 e 2,0% ou aditivo sintético. Foram realizadas as análises de umidade, altura do albúmen, pH, viscosidade, formação e estabilidade da espuma. A linhagem Carijó Barbada apresentou menor quantidade de albúmen, menor umidade e maior viscosidade que a linhagem Isa Brown, entretanto, com a estocagem, a viscosidade diminuiu significativamente para ambas as linhagens. Inicialmente, a adição de 2,0% de urucum ou aditivo sintético foi suficiente para aumentar a viscosidade em ovos obtidos de ambas as linhagens, mas com a estocagem, somente o controle manteve maior viscosidade. A baixa viscosidade não interferiu na

  8. Inherited igneous zircons in jadeitite predate high-pressure metamorphism and jadeitite formation in the Jagua Clara serpentinite mélange of the Rio San Juan Complex (Dominican Republic)

    Science.gov (United States)

    Hertwig, Andreas; McClelland, William C.; Kitajima, Kouki; Schertl, Hans-Peter; Maresch, Walter V.; Stanek, Klaus; Valley, John W.; Sergeev, Sergey A.

    2016-05-01

    This study utilizes zircon SIMS U-Pb dating, REE and trace-element analysis as well as oxygen isotope ratios of zircon to distinguish jadeite-rich rocks that formed by direct crystallization from a hydrous fluid from those that represent products of a metasomatic replacement process. Zircon was separated from a concordant jadeitite layer and its blueschist host, as well as from loose blocks of albite-jadeite rock and jadeitite that were all collected from the Jagua Clara serpentinite-matrix mélange in the northern Dominican Republic. In the concordant jadeitite layer, three groups of zircon domains were distinguished based on both age as well as geochemical and oxygen isotope values: age groups old (117.1 ± 0.9 Ma), intermediate (three dates: 90.6, 97.3, 106.0 Ma) and young (77.6 ± 1.3 Ma). Zircon populations from the blueschist host as well as the other three jadeite-rich samples generally match zircon domains of the old age group in age as well as geochemistry and oxygen isotope ratios. Moreover, these older zircon populations are indistinguishable from zircon typical of igneous oceanic crust and hence are probably inherited from igneous protoliths of the jadeite-rich rocks. Therefore, the results suggest that all investigated jadeite-rich rocks were formed by a metasomatic replacement process. The younger domains might signal actual ages of jadeitite formation, but there is no unequivocal proof for coeval zircon-jadeite growth.

  9. A dimensão da linguagem na narrativa de Adriana Falcão: análise de algumas artimanhas linguístico-discursivas em Luna Clara & Apolo Onze

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    Anete Mariza Torres Di Gregorio

    2011-04-01

    Full Text Available Este trabalho objetiva inicialmente refletir sobre o ensino de Língua Portuguesa, levando-se em conta a tríade: leitura/língua(gem/literatura. Para tal, elege-se uma das obras de Adriana Falcão, cuja escritura mostra apreço à língua materna. Tendo-se em vista mostrar a dimensão da linguagem na narrativa de Falcão, apresenta-se – à luz dos estudos de Dominique Maingueneau – a análise de algumas artimanhas linguístico-discursivas em “Luna Clara & Apolo Onze”. Maingueneau considera válido aplicar as leis do discurso às produções literárias. Chama a atenção para o fato de que a enunciação da criação ficcional fundamenta-se nas leis do discurso, no entanto, não se limita a elas. Cabe ao autor administrar a elaboração de sua obra – encaixada em um determinado contrato da literatura – visando à não frustração do leitor.

  10. Blind shear-wave velocity comparison of ReMi and MASW results with boreholes to 200 m in Santa Clara Valley: Implications for earthquake ground-motion assessment

    Science.gov (United States)

    Stephenson, W.J.; Louie, J.N.; Pullammanappallil, S.; Williams, R.A.; Odum, J.K.

    2005-01-01

    Multichannel analysis of surface waves (MASW) and refraction microtremor (ReMi) are two of the most recently developed surface acquisition techniques for determining shallow shear-wave velocity. We conducted a blind comparison of MASW and ReMi results with four boreholes logged to at least 260 m for shear velocity in Santa Clara Valley, California, to determine how closely these surface methods match the downhole measurements. Average shear-wave velocity estimates to depths of 30, 50, and 100 m demonstrate that the surface methods as implemented in this study can generally match borehole results to within 15% to these depths. At two of the boreholes, the average to 100 m depth was within 3%. Spectral amplifications predicted from the respective borehole velocity profiles similarly compare to within 15 % or better from 1 to 10 Hz with both the MASW and ReMi surface-method velocity profiles. Overall, neither surface method was consistently better at matching the borehole velocity profiles or amplifications. Our results suggest MASW and ReMi surface acquisition methods can both be appropriate choices for estimating shearwave velocity and can be complementary to each other in urban settings for hazards assessment.

  11. Bondat i literatura: el Machado de Xirau, a "Por una senda clara" Goodness and literature: Xirau’s Machado in ‘Por una senda clara’ Bondad y Literatura: el Machado de Xirau del texto ‘Por una senda clara’

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    Misericòrdia Anglès Cervelló

    2009-01-01

    Full Text Available A partir del text del filòsof Joaquim Xirau «Por una senda clara», considerat com a text literari, s’analitza l’ideal de bondat compartit per Xirau i Machado. El corriol clar (la senda clara, com el descriu Xirau, és camí d’educació moral, segons els ideals de la Institución Libre de Enseñanza i els valors de la fenomenologia; és la vida del mestre Giner de los Ríos, és el camí cap a l’exili i és la pròpia vida. El text literari no es limita a descriure una qüestió moral, fa una acció moral. _________________________________ À partir du texte du philosophe Joaquim Xirau, «Por una senda clara», considéré comme un texte littéraire, nous analysons l’idéal de sagesse partagé par Xirau et Machado. Le sentier clair (senda clara, comme le décrit Xirau, est le chemin de l’éducation morale, selon les idéaux de l’Institución Libre de Enseñanza (Institution Libre d’Enseignement et les valeurs de la phénoménologie; c’est la vie du maître Giner de los Ríos, c’est le chemin vers l’exil et c’est la vie même. Le texte littéraire ne se limite pas à décrire une question morale, il a aussi une action morale.On the basis of the literary text «Por una senda clara» by the philosopher Joaquim Xirau, we analyse the ideal of goodness shared by Xirau and Machado. The clear path (senda clara, as described by Xirau, is the way towards moral education, in accordance with the ideals of the Institución Libre de Enseñanza and the values of phenomenology; it is the life of master Giner de los Ríos, the way to exile, and one’s own life. Literary texts not only deal with moral issues, but are moral acts as well.A partir del texto del filósofo Joaquim Xirau «Por una senda clara», considerado como texto literario, se analiza el ideal de bondad compartido por Xirau y Machado. La senda clara, tal como la describe Xirau, es camino de educación moral, según los ideales de la Institución Libre de Enseñanza y los

  12. Variation and clinical significance of Clara cell protein in patients with pulmonary contusion%肺挫伤患者血清CC16的变化及临床意义

    Institute of Scientific and Technical Information of China (English)

    吴峰; 丁伯应; 杨小龙; 任刚; 熊克品; 徐东

    2014-01-01

    目的:探讨肺挫伤患者血清人克拉拉细胞蛋白(Clara cell protein,CC16)水平变化及临床意义。方法:应用ELISA方法检测42例肺挫伤患者(实验Ⅰ组:轻-中度肺挫伤患者24例;实验Ⅱ组:重度肺挫伤患者18例)伤后24 h内及治疗后1 d、3 d、7 d、14 d血清CC16水平变化,并与16例健康体检者(对照组)血清CC16水平进行比较。结果:实验组各个时间点血清CC16水平均高于对照组,差异具有统计学意义( P<0.01)。伤后24 h内和治疗后1 d、3 d、7 d、14 d血清CC16水平之间均有差异( P<0.01),且有逐渐下降趋势。实验Ⅱ组各个时间点血清CC16水平均较实验Ⅰ组同时间点偏高,差异有统计学意义( P<0.01)。结论:肺挫伤患者伤后早期血清CC16水平明显上升,且随治疗进程逐渐下降。血清CC16水平上升与肺挫伤程度有密切关系。血清CC16水平变化可能为肺挫伤早期诊断提供生物学指标。%Objective:To investigate the variation and clinical significance of 16kDa Clara cell protein(CC16) in patients with pulmonary contusion. Methods:Forty-two patients with pulmonary contusion were divided into experimental group I(n=24,moderate pulmonary contusion)and experimental groupⅡ(n=18,severe pulmonary contusion).Enzyme-linked immunoadsordent assay (ELISA) was used to detect the serum levels of CC16 in the two groups of patients within 24 h after the incident and at day 1,3,7 and 14 after treatment.The results were compared with another 16 healthy subjects in-cluded as controls.Results:Serum CC16 level in each time point was higher in the two experimental groups than the controls(P<0.01).The difference was significant concerning the levels of CC16 measured within 24 h after contusion and at day 1,3,7 and 14 after treatment(P<0.01),yet the levels ten-ded to decline.In addition,the levels in each time point in experimental group II were somewhat higher than group

  13. 3D virtual reconstruction of the choir of the Convent of Santa Clara in Toro (Zamora: recovering a medieval space of female devotion through photogrammetric recording and rendering techniques

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    Fernando Gutiérrez Baños

    2016-11-01

    Full Text Available The Convent of Santa Clara in Toro (Zamora was founded in the mid-13th century. After destruction during the Castilian civil struggles of the last years of this century, its fabric was rebuilt and it was inhabited again by the Clarissan nuns, who still occupy it.  Its architecture corresponds for the most part to its early-14th century rebuilding, even though it is concealed by works carried out from the 16th to the 18th centuries, so that it is apparently a Baroque complex.  In the 1950s, in the choir of this Medieval hidden structure, a set of wall paintings of the mid-14thcentury was brought to light (one of the most important set of wall paintings of the early Gothic period ever found in Castile, but they were immediately detached from the walls and sold. It was only after a combination of circumstances that they came back to Toro to be installed in another building, the church of San Sebastián de los Caballeros, transformed into a museum. As a consequence of all these operations, the arrangement and sense of these wall paintings was lost. The virtual three-dimensional (3D reconstruction, based on a deep analysis and criticism of historical sources and on a close inspection and photogrammetric recording of the original room once occupied by the wall paintings, enables us to place them back in their original context through the use of rendering techniques, so recovering one of the most exciting spaces of female devotion of the Castilian 14thcentury.

  14. GENETIC RELATIONSHIPS OF FIVE PERITRICHOUS CILIATES INFERRED FROM INTER SIMPLE SEQUENCE REPEAT (ISSR) MOLECULAR MARKERS%五种缘毛类纤毛虫遗传关系的ISSR研究

    Institute of Scientific and Technical Information of China (English)

    张文静; 余育和; 沈韫芬

    2005-01-01

    In this study, ISSR (inter simple sequence repeat) molecular markers were used to clarify genetic relationships of five peritrichous ciliates: Carchesium polypinum, Epistylis chrysemydis, E. plicatilis, E. urceolata and Vorticella campanula.From 34 primers, 13 polymorphic primers were selected and tested. The genetic distance values going from 0.6667 to 1. 0000 among the five species show the ISSR-PCR method has a high resolution. In the phylogenetic tree constructed with the unweighted pair group method using arithmetic averages (UPGMA), V. campanula was separated from other species firstly; C.polypinum and E. chrysemydis were closely related; in the group of Epistylis species, E. plicatilis and E. urceolata were first clustered together and then grouped with E. chrysemydis. These results were compared with the phylogenetic tree from the complete small subunit ribosomal RNA (SSrRNA) gene sequences. We found that: 1) ISSR primers can give the informative profiles in peritrichous ciliates; 2) C. polypinum has a nearer relation with Epistylis than V. campanula. The colonial or solitary status might be a more important phylogenetic character within peritrichs than the characters of stalk and the myoneme; 3) E.urceolata shared closer relationship with E. plicatilis than E. chrysemydis. The hollow nature of the stalk is a useful phylogenetic and taxonomic character in the genus Epistylis. This study demonstrated that ISSR-PCR method was a new useful method to reveal the relationships among related or similar species in ciliates.%应用ISSR分子标记揭示了5种缘毛类纤毛虫(Carchesium polypinum,Epistylis chrysemydis,E.plicatilis,E.urceolata和Vorticella campanula)的遗传关系.从34个引物中筛选到13个多态性高的引物进行研究.得到的遗传距离(0.666 7~1.000 0)显示ISSR技术具有较高的分辨率.依据构建的UPGMA聚类树,V.campanula首先和其他种类分开;C.polypinum和E.chrysemydis聚在了一起;在3种Epistylis纤毛虫中,E

  15. Predação e canibalismo entre protozoários ciliados (Ciliophora: Entodiniomorphida: Ophryoscolecidae no rúmen de ovinos (Ovis aries Predation and cannibalism among ciliate protozoans (Ciliophora: Entodiniomorphida: Ophryoscolecidae in the rumen of sheep (Ovis aries

    Directory of Open Access Journals (Sweden)

    Isabel Martinele

    2008-09-01

    Full Text Available O objetivo deste trabalho foi registrar ocorrências de predação e canibalismo em protozoários ciliados no rúmen de ovinos. Foram analisadas amostras de conteúdo ruminal de cinco ovinos mestiços Santa Inês, fistulados no rúmen, mantidos em pastagem natural de caatinga, no município de Sertânia, Pernambuco. Foram obtidas seis amostras de conteúdo ruminal de cada ovino, totalizando 30 amostras, as quais foram fixadas em formalina 18,5% (v/v. De cada amostra foi retirada uma alíquota de 1 ml de conteúdo ruminal ao qual se adicionaram três gotas de solução de lugol para a coloração e identificação dos protozoários ciliados. Estas alíquotas foram analisadas utilizando-se lâminas e lamínulas, em campos determinados randomicamente. Constatou-se a ocorrência de interações do tipo predador-presa entre ciliados de Ophryoscolecidae Stein, 1859, onde Elytroplastron bubali (Dogiel, 1928 apresentou comportamento predatório sobre Enoploplastron triloricatum (Dogiel, 1925 e sobre outras espécies de Epidinium Crawley, 1923 e de Entodinium Stein, 1859. Foram ainda observados casos de canibalismo entre espécimes de E. bubali, o que consiste no primeiro registro deste tipo de interação nesta espécie. Registra-se, ainda, pela primeira vez a ocorrência de E. bubali no rúmen de ovinos no Brasil.The objective of the present study was to record the occurrence of predation and cannibalism among ciliate protozoans in the rumen of sheep. The analyzed samples consisted of ruminal contents of five fistulated Santa Inez crossbred sheep, maintained in a natural caatinga (scrubland pasture in the municipality of Sertânia, Pernambuco. Six samples of ruminal content were obtained from each sheep (total of 30 samples and fixed in formalin at 18.5% (v/v. One 1 ml aliquot was obtained from each sample of ruminal content and received tree drops of a lugol solution for staining and identification of protozoa ciliates. These aliquots were analyzed in

  16. Morphological Studies of a Ciliate from the External Ulcerative Japanese Flounder, Paralichthys Olivaceus%一种纤毛虫的分类及形态研究 ——寄生于牙鲆体表溃烂组织中的指状拟舟虫

    Institute of Scientific and Technical Information of China (English)

    周丽; 徐奎栋; 战文斌; 宋微波

    2001-01-01

    报道从牙鲆(Paralichthysolivaceus)体表溃烂组织分离的一种纤毛虫,通过活体观察、扫描电镜、蛋白银染色法、银浸法,对其形态学及纤毛图式做了研究。经鉴定,该纤毛虫为指状拟舟虫(Paralembus digitiformis Kahl,1933),隶属于寡膜纲、盾纤目、嗜污科、拟舟虫属。这是指状拟舟虫在牙鲆上兼性寄生的首次报道。%An external ulcerative disease frequently occurred in Ja paneseflounder, Paralichthys olivaceus, cultured in artificial propagation facilities along the coasts of Shandong, China, has caused mass mortalities in r ecent years. The ciliate was a pathogen to flounder and was identified as Para lembus digitiformis Kahl 1933, a marine facultative parasitic scuticociliatid ciliate. Morphological studies were made on living observations and specimens tr eated with protargol-impregnation techniques and Chatton-Lwoff silver impregna tion techniques as well as scanning electron microscopy. The ciliate, Paralemb us digitiformis Kahl 1933, as an opportunistic pathogen of cultured flounder, is first reported in this paper.

  17. Floodplain Mapping, SANTA CLARA COUNTY, CALIFORNIA, USA

    Data.gov (United States)

    Federal Emergency Management Agency, Department of Homeland Security — The Floodplain Mapping/Redelineation study deliverables depict and quantify the flood risks for the study area. The primary risk classifications used are the...

  18. DCS Hydrology, Santa Clara County, California

    Data.gov (United States)

    Federal Emergency Management Agency, Department of Homeland Security — Hydrology data include spatial datasets and data tables necessary for documenting the hydrologic procedures for estimating flood discharges for a flood insurance...

  19. Esker Ri Nursing Home, Kilnabinnia, Clara, Offaly.

    LENUS (Irish Health Repository)

    Ohmann, Christian

    2011-03-22

    Abstract Background A recent survey has shown that data management in clinical trials performed by academic trial units still faces many difficulties (e.g. heterogeneity of software products, deficits in quality management, limited human and financial resources and the complexity of running a local computer centre). Unfortunately, no specific, practical and open standard for both GCP-compliant data management and the underlying IT-infrastructure is available to improve the situation. For that reason the "Working Group on Data Centres" of the European Clinical Research Infrastructures Network (ECRIN) has developed a standard specifying the requirements for high quality GCP-compliant data management in multinational clinical trials. Methods International, European and national regulations and guidelines relevant to GCP, data security and IT infrastructures, as well as ECRIN documents produced previously, were evaluated to provide a starting point for the development of standard requirements. The requirements were produced by expert consensus of the ECRIN Working group on Data Centres, using a structured and standardised process. The requirements were divided into two main parts: an IT part covering standards for the underlying IT infrastructure and computer systems in general, and a Data Management (DM) part covering requirements for data management applications in clinical trials. Results The standard developed includes 115 IT requirements, split into 15 separate sections, 107 DM requirements (in 12 sections) and 13 other requirements (2 sections). Sections IT01 to IT05 deal with the basic IT infrastructure while IT06 and IT07 cover validation and local software development. IT08 to IT015 concern the aspects of IT systems that directly support clinical trial management. Sections DM01 to DM03 cover the implementation of a specific clinical data management application, i.e. for a specific trial, whilst DM04 to DM12 address the data management of trials across the unit. Section IN01 is dedicated to international aspects and ST01 to the competence of a trials unit\\'s staff. Conclusions The standard is intended to provide an open and widely used set of requirements for GCP-compliant data management, particularly in academic trial units. It is the intention that ECRIN will use these requirements as the basis for the certification of ECRIN data centres.

  20. PRODUCCIÓN PRIMARIA EN UN LAGO DE AGUAS CLARAS DE LA AMAZONÍA COLOMBIANA (LAGO BOA Primary Production In A Clear Water Lake Of Colombian Amazon (Lake Boa

    Directory of Open Access Journals (Sweden)

    GABRIEL ANTONIO PINILLA AGUDELO

    Full Text Available Dentro de los aspectos funcionales de un sistema acuático uno de los más determinantes es la producción fitoplanctónica. En este trabajo se midió la producción primaria del fitoplancton (método del 14C en un lago de aguas claras de la Amazonía colombiana, en diferentes momentos del ciclo hidrológico. La producción primaria osciló entre 0,6 y 2,3 g C m-2 d-1, valor este último medido durante la fase de aguas bajas. Estos resultados indican que la comunidad fitoplanctónica del lago Boa fluctúa desde condiciones de muy baja capacidad de asimilación de carbono inorgánico (aguas altas, hasta momentos en que este potencial se incrementa hasta cuatro veces (aguas bajas. Tales cambios drásticos obedecen a las fluctuaciones en la abundancia de microalgas, las que a su vez se presentan como respuesta a la variación trófica que tiene el lago durante el ciclo hidrológico. De esta manera, se pasa de condiciones oligotróficas en la época de inundación a un estado eutrófico cuando el sistema se desconecta del río en aguas bajas.Phytoplankton production is one of the most significant aspects in aquatic ecosystems. In this paper primary production of the phytoplankton community was measured (14C method in a clear water lake in the Colombian Amazon region in different periods of the hydrological cycle. Primary production varied between 0.6 and 2.3 g C m-2 d-1, the last recorded at low water phase. Results show that the phytoplankton community of Lake Boa fluctuates from very low capacity of carbon assimilation during high water but increased four times during low water. The strong change in productivity follows the variation in algal abundance, which in turn reflects changes in water quality conditions during the hydrologic cycle. Thus, the lake passes from oligotrophic conditions during the flooding period to eutrophic conditions when the lake is disconnected from the river at low water phase.

  1. River channel sensitivity to change in the context of human activities and natural factors: an 80-year record of channel morphodynamics on the lower Santa Clara River, Ventura County, California

    Science.gov (United States)

    Downs, P. W.; Dusterhoff, S. R.; Sears, W. A.

    2010-12-01

    River channel adjustments arise from the application of numerous catchment-based stressors operating at different space and time scales. Natural stressors include the impact of climatic phenomena and their inheritance; human stressors include both direct and indirect factors whose impacts have grown in magnitude and intensity during the Anthropocene, especially since about 1945. Consequently, the sensitivity of river channel morphodynamics is likely to have changed also, with implications for landform understanding and river management. Reconstructing channel morphodynamics during the Anthropocene requires interpreting multiple historical and secondary data sources to document changes at sufficient (i.e., reach-scale) resolution: for the 60-km lower Santa Clara River (LSCR), Ventura County, California, we used flow, sediment and precipitation records, repeat aerial photographs, LiDAR data, repeat topographic surveys, in-channel vegetation data, field observations, numerical modeling of high flow events, and narrative accounts. The catchment historical context since European-American settlement includes periods dominated by ranching and colonization (ca.1820-1890), irrigations and diversions (ca.1890-1955), dams and river modifications (1955-1990), and urban population growth (1990-present). Natural stressors were investigated based on the correlation of instantaneous flood peaks with annual rainfall records in this semi-arid setting. Successful prediction of the majority of gauged floods since about 1950 allows a flood sequence to be reconstructed back to 1873. Floods are clustered and of considerably greater magnitude in El Nino years of the El Nino-Southern Oscillation. The great majority of sediment transport thus occurs in El Nino years so that the dominant discharge is the largest discharge on record, in contrast to humid-region alluvial rivers. Responding to these stressors, the average width of the active channel bed has become narrower by almost 50% (1938

  2. 显示纤毛虫细胞微管骨架的两种荧光标记方法%Two fluorescent labeling methods for revealing microtubular cytoskeleton in ciliates

    Institute of Scientific and Technical Information of China (English)

    余齐耀; 张萌; 陈季武; 倪兵

    2012-01-01

    应用直接荧光标记和免疫荧光标记显微术显示了几种原生动物纤毛虫(如尾草履虫、大尾柱虫、阔口游仆虫)的细胞微管骨架,并据结果提出了用所述方法制备标本时需注意的几个方面:对游仆虫,可以忽略某些步骤;对大尾柱虫各种药品的浓度以及处理时间以较小为宜.%The direct fluorescent labeling and the immunofluorescent labeling with antibody against a-tubulin were used to show the mi-crotubular cytoskeleton of several ciliate protozoans such as Paramecium caudatum, Euplotes eurystomus and Urostyla grandis. Based on the results, the study also proposed some points which should be noted in the preparation of specimen with the methods mentioned a-bove (I.e. , some steps can be ignored in Euplotes; a lower concentration of various drugs and a less processing time will be appropriate for Urostyla species).

  3. Classification of the peritrich ciliate Opisthonecta matiensis (Martín-Cereceda et al. 1999) as Telotrochidium matiense nov. comb., based on new observations and SSU rDNA phylogeny.

    Science.gov (United States)

    Martín-Cereceda, Mercedes; Guinea, Almudena; Bonaccorso, Elisa; Dyal, Patricia; Novarino, Gianfranco; Foissner, Wilhelm

    2007-11-01

    New observations on Opisthonecta matiensis Martín-Cereceda et al. [1999. Description of Opisthonecta matiensis n. sp. (Protozoa, Ciliophora), a new peritrich ciliate from wastewater. J. Eukaryot. Microbiol. 46, 283-289] especially the lack of an epistomial membrane, reveal that the species does not belong to the genus Opisthonecta, but to Telotrochidium, the other genus within the family Opisthonectidae Foissner, 1975. The contractile vacuole and the cytopyge are on the dorsal wall of the vestibulum and the trochal band is limited distally and proximally by rows of narrowly spaced pellicular pores. Thus the species is redefined as Telotrochidium matiense nov. comb. The morphological, cortical and nuclear events occurring during conjugation are illustrated, compared with those in other species, and phylogenetically discussed. Invariably, the microconjugants attach to and penetrate the lateral side of the macroconjugants. Nuclear processes are very similar to those reported from other peritrichs. The small subunit rRNA gene (SSU rDNA) is sequenced and the phylogeny within Opisthonectidae and peritrichs examined. T. matiense is more closely related to Epistylis (63% Maximum Parsimony (MP), 85% Maximum Likelihood (ML)) than to any other genus, while another representative of the family, viz., Opisthonecta henneguyi, is closely related to Vorticella microstoma, Astylozoon enriquesi and clone RT3n18 (100% MP, 100% ML). Morphology and gene sequences suggest that Telotrochidium and Opisthonecta have derived from different lineages of stalked peritrichs: Opisthonecta could have arisen from peritrichs with stalk myonemes, while Telotrochidium probably evolved from peritrichs without stalk myonemes.

  4. Effect of polysaccharide addition on the foaming properties of egg white protein in aqueous and high sugar contente systems = Efeito da adição de polissacarídeos nas propriedades espumantes de proteínas da clara de ovo em sistemas aquoso e com alto teor de açúcares

    OpenAIRE

    Mitie Sônia Sadahira

    2014-01-01

    Nos confeitos aerados (marshmallow e nougat), a espuma é produzida pela aeração de xaropes de açúcares, estabilizada por proteínas tais como proteínas da clara de ovo (PCO). A pectina, polissacarídeo aniônico, pode formar complexos eletrostáticos com proteína em pH abaixo do ponto isoelétrico da proteína. A hidroxipropilmetilcelulose (HPMC) é um polissacarídeo neutro com propriedades emulsificantes. O trabalho visou estudar as propriedades espumantes (capacidade de aeração e estabilidade da e...

  5. COMMUNITY STRUCTURE AND DISTRIBUTION OF PELAGIC NANOFLAGELLATES AND CILIATES AND THEIR RELATIONSHIP WITH JELLYFISH OCCURRENCE IN SOUTHERN YELLOW SEA%黄海水母旺发区浮游鞭毛虫和纤毛虫群落结构分布及其与水母发生关系初探

    Institute of Scientific and Technical Information of China (English)

    丁军军; 徐奎栋

    2012-01-01

    The role of nanoflagellates and ciliates during jellyfish bloom remains unexplored. We investigated the changes of the community structure and distribution of planktonic nanoflagellates and ciliates collected from the transects E, G and I in the southern Yellow Sea in April and August of 2011. The nanoflagellates and ciliates were studied using DAPI epifluorescence microscopy and the quantitative protargol stain. The abundance of total nanoflagellates was high in the coastal area and decreased towards the offshore area, Vertically, nanoflagellates mainly distributed in the surface and near the bottom layers in water. Compared with those in spring, the total abundance and biomass of nanoflagellates in- creased in summer. The abundance of ciliates increased from inshore to offshore area. This was different from that of nan- oflagellates. Ciliates in the surface layer contributed up to 80% of total abundance and abruptly decreased below the 30 m depth. Compared with those in spring, the overall ciliate abundance and biomass decreased by about 50% in summer when jellyfish appeared. The ciliate abundance in summer was only 30%--40% of that in spring at transects E and G, while the ciliate abundance at the transect I, where there was no jellyfish observed, highly increased in summer. Jellyfish can cause direct and indirect changes to nano- and microzooplankton through cascading effects. The sharp decreases of ciliates at transects E and G were likely attributed to the predation pressure from increasing jellyfish, and consequently resulted in the increase of nanoflagellates. In contrast, ciliates increased at transect I without the impact of jellyfish.%鞭毛虫和纤毛虫在海洋微食物环和经典食物链间的能量流动中起着重要的枢纽作用,但其在水母暴发过程中的作用仍然不明。本研究基于2011年春季以及水母旺发的夏季黄海专项航次,通过荧光染色技术和定量蛋白银法研究了南黄海水母频发海域3

  6. Streamflow gains and losses along San Francisquito Creek and characterization of surface-water and ground-water quality, southern San Mateo and northern Santa Clara counties, California, 1996-97

    Science.gov (United States)

    Metzger, Loren F.

    2002-01-01

    San Francisquito Creek is an important source of recharge to the 22-square-mile San Francisquito Creek alluvial fan ground-water subbasin in the southern San Mateo and northern Santa Clara Counties of California. Ground water supplies as much as 20 percent of the water to some area communities. Local residents are concerned that infiltration and consequently ground-water recharge would be reduced if additional flood-control measures are implemented along San Francisquito Creek. To improve the understanding of the surface-water/ground-water interaction between San Francisquito Creek and the San Francisquito Creek alluvial fan, the U.S. Geological Survey (USGS) estimated streamflow gains and losses along San Francisquito Creek and determined the chemical quality and isotopic composition of surface and ground water in the study area.Streamflow was measured at 13 temporary streamflow-measurement stations to determine streamflow gains and losses along a 8.4-mile section of San Francisquito Creek. A series of five seepage runs between April 1996 and May 1997 indicate that losses in San Francisquito Creek were negligible until it crossed the Pulgas Fault at Sand Hill Road. Streamflow losses increased between Sand Hill Road and Middlefield Road where the alluvial deposits are predominantly coarse-grained and the water table is below the bottom of the channel. The greatest streamflow losses were measured along a 1.8-mile section of the creek between the San Mateo Drive bike bridge and Middlefield Road; average losses between San Mateo Drive and Alma Street and from there to Middlefield Road were 3.1 and 2.5 acre-feet per day, respectively.Downstream from Middlefield Road, streamflow gains and losses owing to seepage may be masked by urban runoff, changes in bank storage, and tidal effects from San Francisco Bay. Streamflow gains measured between Middlefield Road and the 1200 block of Woodland Avenue may be attributable to urban runoff and (or) ground-water inflow. Water

  7. Potential distribution of sycamore lace bug, Corythucha ciliate in China (Hemiptera : Tingidae)%悬铃木方翅网蝽在我国的潜在分布分析

    Institute of Scientific and Technical Information of China (English)

    朱耿平; 王晓静; 刘国卿; 卜文俊

    2012-01-01

    运用生态位模型MaxEnt和GARP对悬铃木方翅网蝽Corythucha ciliate (Say)在我国的潜在分布进行了模拟,并结合其寄主植物悬铃木在我国的分布进行了分析.实验采用悬铃木方翅网蝽在我国的分布数据,结合6种气候变量和海拔数据构建模型,并将MaxEnt和GARP的输出结果进行合意.研究显示MaxEnt和GARP的模拟结果基本一致,均能较好的模拟悬铃木方翅网蝽在我国的分布,二者均显示山东西南部和中部、四川中部和东部、重庆、陕西中部、河南中部和东部、安徽、江苏、上海、贵州、湖南、江西、浙江、福建中部和北部、云南中部等地区为悬铃木方翅网蝽的适宜分布区,此外,河北中部和南部、山东东部,广东和广西的北部亦具潜在分布的可能性.与MaxEnt输出结果相比,GARP相对较为保守.MaxEnt输出结果显示年平均气温和极端低温对悬铃木方翅网蝽地理分布的限制作用最大.考虑到该虫对高低温度的耐受性,我国二球悬铃木栽培的南界(南宁和广州)和北界(大连、北京、石家庄、太原)需要重视和监控起来.%Potential distribution of Corythucha ciliate (Say) in China were predicted using two ecological niche modelling algorithms (i.e. , MaxEnt and GARP). The models were calibrated using domestic records and 6 bioclimatic variables plus elevation. These potential distributions were then evaluated with respect to the distribution of pest host plant ( i. e. , Platanus spp. ). Significant variables associating with the bug' s occurrence were identified. Both models performed good discriminability compared to random prediction. Result of GARP was a little conservative compared to MaxEnt. High suitable areas identified by the consensus of two models including; southwestern and central Shandong, eastern and central Sichuan, Chongqing, central Shaanxi, eastern and central Henan, Anhui, Jiangsu, Shanghai, Guizhou, Hunan, Jiangxi, Zhejiang

  8. 汉中市兴元湖纤毛虫群落结构与水质评价%Study on Community Structure of Ciliates and Water Evaluation in Xingyuan Lake of Hanzhong

    Institute of Scientific and Technical Information of China (English)

    刘智峰

    2015-01-01

    2014年3~5月,利用PFU法对汉中市兴元湖水中纤毛虫群落进行调查,从3个采样点共观察到56种纤毛虫,隶属1门,3纲,11目,32属。优势种为纵长板壳虫(Coleps elonqatus)、钝漫游虫(Litonotus obtusus)、钩刺斜管虫(Chilodonella uncinata)、珍珠映毛虫(Cinetochilum margaritaceum)、沟钟虫(Vorti-cella convallaria)、尾瘦尾虫(Uroleptus candatus)、伪尖毛虫(Oxyticha fallax)、阔口游仆虫(Euplotes eurys-tomus)。通过计算水体纤毛虫的多样性指数,大小关系为3号采样点﹤1号采样点﹤2号采样点。水质评价结果,1号采样点属于β-中污型,2号采样点属于寡污型,3号采样点属于a-中污型。%The investigation on ciliates community and water quality assessment in Xingyuan Lake was carried out from April to May in 2014. Fifty-six species belonging to three classes of eleven orders of thirty genuses are discovered from three test sites. The dominant spices were Coleps elonqatus, Litonotus obtusus, Chilodonella uncinata, Cinetochilum margaritaceum, Vorticella convallaria, Uroleptus candatus, Oxyticha fallax and Euplotes eurystomus. Using species diversity index to assess water quality of Xingyuan Lake, the results showed that site one belonged to β-mesosaprobic zone; site two belonged to oligosaprobic zone; and site three belonged to a-mesosaprobic zone.

  9. 夏季蓝藻水华期间太湖河口区和敞水区纤毛虫群落组成及水平分布%COMMUNITY COMPOSITIONS AND HORIZONTAL DISTRIBUTION OF CILIATES IN LAKE TAIHU DURING THE CYANOBACTERIAL BLOOM IN SUMMER

    Institute of Scientific and Technical Information of China (English)

    李静; 卢文轩; 张雷燕; 陈非洲

    2014-01-01

    In the present study, ciliate samples were collected from 10 sites in the estuary zones and 14 sites in the pe-lagic zones in the northern area of Lake Taihu in July 2009. The ciliate species and their horizontal distribution were analyzed with quantitative protargol stain (QPS) method. We also explored the relationship between the ciliate commu-nity compositions and the environmental variables. We observed 105 species that represented 60 genera, 15 orders and 3 classes. The numbers of the species in different order were counted and compared. Orders Haptorida (21 species) and Oligotrichida (20 species) ranked the first and second, followed by orders Prostomatida (12 species), Peritrichida (11 species), and Hypotrichida (11 species). These five orders were predominant in the samples, while less species belonged to the other ten orders -- Karyorelictida, Pleurostomatida, Colpodida, Nassulida, Cyrophorida, Suctoria, Hy-menostomatida, Synhymeniida, Scuticociliatida, and Heterotrichida. Halteria bifurcate Tamar, H. grandinella Dujardin, Rimostrombidium brachykinetum Krainer, Tintinnopsis cylindrata Kofoid & Campbell and Cyclidium glaucoma Müller were the dominant species in both estuary (3.1%-12.3% in abundance) and pelagic (4.5%-18.1%) zones, followed by Urotricha farcta Claparède & Lachmann, Codonella cratera Leidy, R. humile Penard, Strombidium mirabile Penard, Tintinnidium pusillum Entz, Vorticella aquadulcis complex and V. campanula Ehrenberg. The abundance of ciliate was higher in the estuary zones than that in the pelagic zones, which fell in the range of 1600 to 80900 cells/L (average 31407 cells/L) and 1225 cells/L to 36000 cells/L (average 18618 cells/L), respectively. The biomass of ciliate showed the same pattern which was 1322.6μg/L and 543.6μg/L on average in the estuary and pelagic zones, respectively. Nei-ther the abundance nor the biomass of ciliates showed significant differences (P>0.05). Among the functional feeding groups, bactivorous and

  10. Seasonal and spatial dynamics of a ciliate assemblage in a warm-monomictic Lake Alchichica (Puebla, Mexico Dinámica temporal y espacial de la comunidad de ciliados en un lago monomíctico-cálido Alchichica (Puebla, México

    Directory of Open Access Journals (Sweden)

    Miroslav Macek

    2008-08-01

    Full Text Available The distribution of the ciliate assemblage was surveyed along a depth gradient in the maar crater, athalassohaline, warm monomictic Lake Alchichica (Puebla, Mexico from June 2003 to October 2006 (monthly. DAPI staining was employed to count ciliates while the Quantitative Protargol Staining was used for their identification. Peritrichs often numerically dominated the ciliate assemblage; a maximum of 54 cells ml-1 (Rhabdostyla sp. was observed in the surface layer at the end of the mixing period, during the development of diatoms (Cyclotella alchichicana, cyanobacterial (Nodularia sp. bloom and its decay. Minute spirotrichs (particularly Halteria grandinella and a haptorid, Belonophrya pelagica occasionally dominated the epilimnion while mixotrophic Euplotes cf. daidaleos and Pelagothrix sp. were important round the oxycline along with haptorids, particularly Phialina sp. Scuticociliates Cyclidium glaucoma, Uronema nigricans, and anaerobic ciliates Isocyclidium globosum and Caenomorpha sp. dominated within the hypolimnetic assemblages.De junio de 2003 a diciembre de 2006 se estudió mensualmente la distribución de la comunidad de ciliados en el gradiente de profundidades del Lago Alchichica (Puebla, México, un lago cráter, tipo maar, atalasohalino de comportamiento monomíctico-cálido. La tinción de DAPI fue empleada para el recuento de los ciliados y la tinción de protargol cuantitativa para su identificación. Frecuentemente los ciliados perítricos dominaron numéricamente la comunidad. Al final del periodo de estratificación y durante el desarrollo de las diatomeas (Cyclotella alchichicana y el florecimiento y posterior decaimiento de las cianobacterias filamentosas (Nodularia sp., se observó un máximo de 54 cél. ml-¹ de Rhabdostyla sp. en la superficie del lago. Los espirotricos pequeños (particularmente Halteria grandinella y los haptóridos como Belonophrya pelagica, dominaron ocasionalmente en el epilimnion, mientras que los

  11. Acesso ao alimento artificial e enchimento do trato digestivo de juvenis do camarão marinho Litopenaeus vannamei (Boone (Crustacea, Decapoda, Penaeidae durante as fases clara e escura do período de 24 horas Artificial food access and digestive tract filling of juvenil marine shrimp Litopenaeus vannamei (Boone (Crustacea, Decapoda, Penaeidae during light and dark phases in 24-hour period

    Directory of Open Access Journals (Sweden)

    Cibele S. Pontes

    2005-12-01

    Full Text Available A escassez de dados acerca do comportamento alimentar do camarão marinho Litopenaeus vannamei (Boone, 1931 com relação ao alimento artificial ofertado em bandejas poderá induzir a uma alimentação inadequada, resultando no desperdício da ração, no aporte desnecessário de nutrientes, e conseqüente aumento dos custos com a alimentação e da poluição ambiental potencial desta atividade. Objetivando fornecer subsídios para a melhoria do manejo alimentar praticado nas fazendas, foram realizados estudos comportamentais utilizando 64 juvenis de Litopenaeus vannamei (7,57 ± 1,01g, mantidos em densidade populacional de 33 m², submetidos a fotoperíodo artificial, em ciclo invertido, para observação durante as fases clara e escura. A ração foi ofertada em intervalos pré-estabelecidos, registrando-se posteriormente através de método focal contínuo: a latência para chegada à bandeja, b latência para consumo do alimento e c Índice de Enchimento do Trato Digestivo. Os animais foram mais rápidos para chegar à bandeja e também para iniciar o consumo do alimento nos horários da fase clara. O enchimento do trato digestivo mostrou-se superior na meia hora subsequente à oferta do alimento, especialmente nos horários da fase clara.The few data on the marine shrimp Litopenaeus vannamei (Boone, 1931 behavior related to feed offer in trays can result inadequate feeding by the animal, feed wastage and unnecessary nutrient input, increasing feed costs and potential environmental pollution of that culture. In order to provide tools for improved feed management methods in shrimp farms, a behavioral study was conducted, using 64 Litopenaeus vannamei juveniles (7,57 ± 1,01g, one animal per 33 m². They were submitted to artificial photoperiods, half of them in reversed cycle, in order to register behavior during light and dark phases. The following variables were registered (continuous sampling after feed exposition: a latency to access the

  12. 三聚氰胺对纤毛类原生动物梨形四膜虫的细胞毒性%Cytotoxicity Assessment of Melamine Using the Ciliated Protozoan Tetrahymena pyriforrnis

    Institute of Scientific and Technical Information of China (English)

    王正方; 齐小花; 邹明强; 张卓勇; 徐芳

    2009-01-01

    三聚氰胺曾被用为牛类的非蛋白类氮源,并被非法掺入食品中从而提高其表观蛋白含量.实验利用一种单细胞真核生物模型--纤毛类原生动物梨形四膜虫(Tetrahymena pyriformis)研究了三聚氰胺的细胞毒性.结果显示,三聚氰胺对梨形四膜虫的生长速率具有抑制作用,并且这种抑制作用与三聚氰胺浓度成正相关性,其IC50值为0.78g·L-1.细胞同时发生形变.实验证明梨形四膜虫生物测定法相对于动物实验具有耗时短、成本低、操作简便的优势,在潜在毒性物质的风险性评估实验中可成为一种优良的替代模型.%Melamine was once used as a non-protein nitrogen(NPN)source for cattle,and unethically added to food productions in order to increase the apparent protein content.In this study,the cytotoxicological impact of melamine was determined using a unicellular eukaryote bioassay model,the ciliated protozoan Tetrahymena pyriformis(T.pyriformis).The results showed a concentration-dependent inhibitory effect of melamine on the cell proliferation rate of T.pyriformis populations,and the IC50 value was estimated to be 0.78g·L-1.Deformed cells were also observed.Our experiment demonstrated that T. pyriformis bioassay,with advantages such as less time-consuming,lower cost and simpler operations,provides a good alternative in vitro method to animal experiments for the risk assessment of potentially toxic substances.

  13. Mineralogy and trace-element geochemistry of the high-grade iron ores of the Águas Claras Mine and comparison with the Capão Xavier and Tamanduá iron ore deposits, Quadrilátero Ferrífero, Brazil

    Science.gov (United States)

    Spier, Carlos Alberto; de Oliveira, Sonia Maria Barros; Rosière, Carlos Alberto; Ardisson, José Domingos

    2008-02-01

    Several major iron deposits occur in the Quadrilátero Ferrífero (QF), southeastern region of Brazil, where metamorphosed and heterogeneously deformed banded iron formation (BIF) of the Cauê Formation, regionally called itabirite, was transformed into high- (Fe >64%) and low-grade (30% < Fe < 64%) hematite ores. Based on their mineralogical composition, three major types of itabirites occur in the QF: siliceous, dolomitic, and amphibolitic itabirite. Unlike other mines in the QF, the Águas Claras Mine contained mainly high-grade ores hosted within dolomitic itabirite. Two distinct types of high-grade ore occurred at the mine: soft and hard. The soft ore was the most abundant and represented more than 85% of the total ore mined until it was mined out in 2002. Soft and hard ores consist essentially of hematite, occurring as martite, anhedral to granular/tabular hematite and, locally, specularite. Gangue minerals are rare, consisting of dolomite, sericite, chlorite, and apatite in the hard and soft ores, and Mn-oxides and ferrihydrite in the soft ore where they are concentrated within porous bands. Chemical analyses show that hard and soft ores consist almost entirely of Fe2O3, with a higher amount of detrimental impurities, especially MnO, in the soft ore. Both hard and soft ores are depleted in trace elements. The high-grade ores at the Águas Claras Mine have at least a dual origin, involving hypogene and supergene processes. The occurrence of the hard, massive high-grade ore within “fresh” dolomitic itabirite is evidence of its hypogene origin. Despite the contention about the origin of the dolomitic itabirite (if this rock is a carbonate-rich facies of the Cauê Formation or a hematite-carbonate precursor of the soft high-grade ore), mineralogical and geochemical features of the soft high-grade ore indicate that it was formed by leaching of dolomite from the dolomitic itabirite by meteoric water. The comparison of the Águas Claras, Capão Xavier and

  14. Sex determination: ciliates' self-censorship.

    Science.gov (United States)

    Bloomfield, Gareth

    2014-07-07

    Differentiation involves the expression of certain latent cellular characteristics and the repression of others. A new study has revealed how Paramecium uses short RNAs to delete information from the somatic genome of one of its two sexes.

  15. Ciliates as engineers of phototrophic biofilms

    NARCIS (Netherlands)

    Weerman, Ellen J.; van der Geest, Harm G.; van der Meulen, Myra D.; Manders, Erik M. M.; van de Koppel, Johan; Herman, Peter M. J.; Admiraal, Wim

    2011-01-01

    1. Phototrophic biofilms consist of a matrix of phototrophs, non-photosynthetic bacteria and extracellular polymeric substances (EPS) which is spatially structured. Despite widespread exploitation of algae and bacteria within phototrophic biofilms, for example by protozoans, the 'engineering' effect

  16. Ciliates as engineers of phototrophic biofilms.

    NARCIS (Netherlands)

    Weerman, E.J.; Geest, H.G.; Meulen, M.D.; Manders, E.M.M.; Van de Koppel, J.; Herman, P.M.J.; Admiraal, W.

    2011-01-01

    1.Phototrophic biofilms consist of a matrix of phototrophs, non-photosynthetic bacteria and extracellular polymeric substances (EPS) which is spatially structured. Despite widespread exploitation of algae and bacteria within phototrophic biofilms, for example by protozoans, the ‘engineering’ effects

  17. Ciliates as engineers of phototrophic biofilms.

    NARCIS (Netherlands)

    Weerman, E.J.; van der Geest, H.G.; van der Meulen, M.D; Manders, E.M.M.; van de Koppel, J.; Herman, P.M.J.; Admiraal, W.

    2011-01-01

    1. Phototrophic biofilms consist of a matrix of phototrophs, non-photosynthetic bacteria and extracellular polymeric substances (EPS) which is spatially structured. Despite widespread exploitation of algae and bacteria within phototrophic biofilms, for example by protozoans, the ‘engineering’ effect

  18. Using the Ciliate Protozoan Vorticella in Teaching.

    Science.gov (United States)

    Jones, Alick R.

    1980-01-01

    Describes methods for collection, culture, observation, and making permanent stained preparations of the protozoan vorticella. Suggestions are made for experiments to investigate growth, reproduction, settlement, ecology, feeding, and osmoregulation. (CS)

  19. Airborne acrolein induces keratin-8 (Ser-73) hyperphosphorylation and intermediate filament ubiquitination in bronchiolar lung cell monolayers.

    Science.gov (United States)

    Burcham, Philip C; Raso, Albert; Henry, Peter J

    2014-05-07

    The combustion product acrolein is a key mediator of pulmonary edema in victims of smoke inhalation injury. Since studying acrolein toxicity in conventional in vitro systems is complicated by reactivity with nucleophilic culture media constituents, we explored an exposure system which delivers airborne acrolein directly to lung cell monolayers at the air-liquid interface. Calu-3 lung adenocarcinoma cells were maintained on membrane inserts such that the basal surface was bathed in nucleophile-free media while the upper surface remained in contact with acrolein-containing air. Cells were exposed to airborne acrolein for 30 min before they were allowed to recover in fresh media, with cell sampling at defined time points to allow evaluation of toxicity and protein damage. After prior exposure to acrolein, cell ATP levels remained close to controls for 4h but decreased in an exposure-dependent manner by 24h. A loss of transepithelial electrical resistance and increased permeability to fluorescein isothiocyanate-labeled dextran preceded ATP loss. Use of antibody arrays to monitor protein expression in exposed monolayers identified strong upregulation of phospho-keratin-8 (Ser(73)) as an early consequence of acrolein exposure. These changes were accompanied by chemical damage to keratin-8 and other intermediate filament family members, while acrolein exposure also resulted in controlled ubiquitination of high mass proteins within the intermediate filament extracts. These findings confirm the usefulness of systems allowing delivery of airborne smoke constituents to lung cell monolayers during studies of the molecular basis for acute smoke intoxication injury.

  20. 甘肃徽县水阳江铅锌污染段纤毛虫群落特征及对水质的评价%Community Characteristics of Ciliates and Water Quality Assessment in the Pb-Zn-Contaminated Section of the Shuiyangjiang River in Huixian County,Gansu Province

    Institute of Scientific and Technical Information of China (English)

    马正学; 贺鹏辉; 杨镇; 宁应之

    2009-01-01

    2006年10月至2008年5月,在甘肃徽县水阳江铅锌污染段选择4个样点,分别在3个水期采集水样,研究了纤毛虫物种多样性及群落结构.共鉴定到纤毛虫52种,隶属于3纲12目29科33属.利用纤毛虫群落特征指标对水阳江铅锌污染段的水质进行了初步评价.综合评价结果显示,4个样点受污染程度为县城>厂区>牟坝>对照,污染级别为中度至重度.初步筛选出瓜形膜袋虫(Cyclidium citrullus)、尾草履虫(Paramoecium caudatum)、薄漫游虫(Litonotus lamella)作为铅锌污染水体的指示物种.%Species diversity and community structure of ciliates in the Pb-Zn-Contaminated section of the Shuiyangjiang River were studied during the period from October 2006 to May 2008,using water samples collected from 4 sampling sites in that section in 3 different periods.In the water samples,52 species of ciliates,sorted into 3 classes,12 orders,29 family and 33 genus,were identified,based on which water quality of that section of the Shuiyangjiang River was preliminarily evaluated.Results show that pollution of the water varied in degree between the four sampling sites in the section,following a decreasing order of Xiancheng>Changqu>Muba>Duizhao,from severe to moderate.Ciliates of Cyclidium citrullus,Paramecium caudatum,and Litonotus lamella were screened out to be indicators of Pb-Zn-contamination of water bodies.

  1. 广东沿海的砂壳纤毛虫及3种国内新纪录%TINTINNID CILIATES FROM COASTAL WATERS OFF GUANGDONG, WITH NOTES ON THREE NEW RECORDS OF CHINA (PROTOZOA, CILIOPHORA)

    Institute of Scientific and Technical Information of China (English)

    张伟; 姜勇; 李继秋; 马洪钢; 许恒龙

    2012-01-01

    Tintinnid ciliates are an important component of plankton communities and widely distribute in the coastal waters. However, in morphological studies, the tintinnids belonged to the poorly known groups, especially in the water of the South China Sea. In the winter of 2008, the tintinnids sampled from the coastal waters in the South China Sea (Guangdong) were investigated. The water temperature was 17-20℃ and the salinity was about 30‰-31‰. Samples were collected by a horizontal tow net from 1.5 m under the water surface. Part of samples were immediately stored in 4℃ for in vivo observation and the others were fixed in formalin at a final concentration of 5% for future observations of lorica characteristics. The morphological characteristics including lorica features were observed and described by using light microscopical method. In this present study, 16 species were indentified and they belonged to Tintinnopsis, C