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Sample records for breeding value

  1. Cassava Breeding I: The Value of Breeding Value.

    Science.gov (United States)

    Ceballos, Hernán; Pérez, Juan C; Joaqui Barandica, Orlando; Lenis, Jorge I; Morante, Nelson; Calle, Fernando; Pino, Lizbeth; Hershey, Clair H

    2016-01-01

    Breeding cassava relies on several selection stages (single row trial-SRT; preliminary; advanced; and uniform yield trials-UYT). This study uses data from 14 years of evaluations. From more than 20,000 genotypes initially evaluated only 114 reached the last stage. The objective was to assess how the data at SRT could be used to predict the probabilities of genotypes reaching the UYT. Phenotypic data from each genotype at SRT was integrated into the selection index (SIN) used by the cassava breeding program. Average SIN from all the progenies derived from each progenitor was then obtained. Average SIN is an approximation of the breeding value of each progenitor. Data clearly suggested that some genotypes were better progenitors than others (e.g., high number of their progenies reaching the UYT), suggesting important variation in breeding values of progenitors. However, regression of average SIN of each parental genotype on the number of their respective progenies reaching UYT resulted in a negligible coefficient of determination (r (2) = 0.05). Breeding value (e.g., average SIN) at SRT was not efficient predicting which genotypes were more likely to reach the UYT stage. Number of families and progenies derived from a given progenitor were more efficient predicting the probabilities of the progeny from a given parent reaching the UYT stage. Large within-family genetic variation tends to mask the true breeding value of each progenitor. The use of partially inbred progenitors (e.g., S1 or S2 genotypes) would reduce the within-family genetic variation thus making the assessment of breeding value more accurate. Moreover, partial inbreeding of progenitors can improve the breeding value of the original (S0) parental material and sharply accelerate genetic gains. For instance, homozygous S1 genotypes for the dominant resistance to cassava mosaic disease (CMD) could be generated and selected. All gametes from these selected S1 genotypes would carry the desirable allele and

  2. CASSAVA BREEDING I: THE VALUE OF BREEDING VALUE

    Directory of Open Access Journals (Sweden)

    Hernán Ceballos

    2016-08-01

    Full Text Available Breeding cassava relies on several selection stages (single row trial-SRT; preliminary; advanced; and uniform yield trials - UYT. This study uses data from 14 years of evaluations. From more than 20,000 genotypes initially evaluated only 114 reached the last stage. The objective was to assess how the data at SRT could be used to predict the probabilities of genotypes reaching the UYT. Phenotypic data from each genotype at SRT was integrated into the selection index (SIN used by the cassava breeding program. Average SIN from all the progenies derived from each progenitor was then obtained. Average SIN is an approximation of the breeding value of each progenitor. Data clearly suggested that some genotypes were better progenitors than others (e.g. high number of their progenies reaching the UYT, suggesting important variation in breeding values of progenitors. However, regression of average SIN of each parental genotype on the number of their respective progenies reaching UYT resulted in a negligible coefficient of determination (r2 = 0.05. Breeding value (e.g. average SIN at SRT was not efficient predicting which genotypes were more likely to reach the UYT stage. Number of families and progenies derived from a given progenitor were more efficient predicting the probabilities of the progeny from a given parent reaching the UYT stage. Large within-family genetic variation tends to mask the true breeding value of each progenitor. The use of partially inbred progenitors (e.g. S1 or S2 genotypes would reduce the within-family genetic variation thus making the assessment of breeding value more accurate. Moreover, partial inbreeding of progenitors can improve the breeding value of the original (S0 parental material and sharply accelerate genetic gains. For instance, homozygous S1 genotypes for the dominant resistance to cassava mosaic disease could be generated and selected. All gametes from these selected S1 genotypes would carry the desirable allele

  3. Cassava Breeding I: The Value of Breeding Value

    Science.gov (United States)

    Ceballos, Hernán; Pérez, Juan C.; Joaqui Barandica, Orlando; Lenis, Jorge I.; Morante, Nelson; Calle, Fernando; Pino, Lizbeth; Hershey, Clair H.

    2016-01-01

    Breeding cassava relies on several selection stages (single row trial-SRT; preliminary; advanced; and uniform yield trials—UYT). This study uses data from 14 years of evaluations. From more than 20,000 genotypes initially evaluated only 114 reached the last stage. The objective was to assess how the data at SRT could be used to predict the probabilities of genotypes reaching the UYT. Phenotypic data from each genotype at SRT was integrated into the selection index (SIN) used by the cassava breeding program. Average SIN from all the progenies derived from each progenitor was then obtained. Average SIN is an approximation of the breeding value of each progenitor. Data clearly suggested that some genotypes were better progenitors than others (e.g., high number of their progenies reaching the UYT), suggesting important variation in breeding values of progenitors. However, regression of average SIN of each parental genotype on the number of their respective progenies reaching UYT resulted in a negligible coefficient of determination (r2 = 0.05). Breeding value (e.g., average SIN) at SRT was not efficient predicting which genotypes were more likely to reach the UYT stage. Number of families and progenies derived from a given progenitor were more efficient predicting the probabilities of the progeny from a given parent reaching the UYT stage. Large within-family genetic variation tends to mask the true breeding value of each progenitor. The use of partially inbred progenitors (e.g., S1 or S2 genotypes) would reduce the within-family genetic variation thus making the assessment of breeding value more accurate. Moreover, partial inbreeding of progenitors can improve the breeding value of the original (S0) parental material and sharply accelerate genetic gains. For instance, homozygous S1 genotypes for the dominant resistance to cassava mosaic disease (CMD) could be generated and selected. All gametes from these selected S1 genotypes would carry the desirable allele and

  4. Domestic estimated breeding values and genomic enhanced breeding values of bulls in comparison with their foreign genomic enhanced breeding values.

    Science.gov (United States)

    Přibyl, J; Bauer, J; Čermák, V; Pešek, P; Přibylová, J; Šplíchal, J; Vostrá-Vydrová, H; Vostrý, L; Zavadilová, L

    2015-10-01

    Estimated breeding values (EBVs) and genomic enhanced breeding values (GEBVs) for milk production of young genotyped Holstein bulls were predicted using a conventional BLUP - Animal Model, a method fitting regression coefficients for loci (RRBLUP), a method utilizing the realized genomic relationship matrix (GBLUP), by a single-step procedure (ssGBLUP) and by a one-step blending procedure. Information sources for prediction were the nation-wide database of domestic Czech production records in the first lactation combined with deregressed proofs (DRP) from Interbull files (August 2013) and domestic test-day (TD) records for the first three lactations. Data from 2627 genotyped bulls were used, of which 2189 were already proven under domestic conditions. Analyses were run that used Interbull values for genotyped bulls only or that used Interbull values for all available sires. Resultant predictions were compared with GEBV of 96 young foreign bulls evaluated abroad and whose proofs were from Interbull method GMACE (August 2013) on the Czech scale. Correlations of predictions with GMACE values of foreign bulls ranged from 0.33 to 0.75. Combining domestic data with Interbull EBVs improved prediction of both EBV and GEBV. Predictions by Animal Model (traditional EBV) using only domestic first lactation records and GMACE values were correlated by only 0.33. Combining the nation-wide domestic database with all available DRP for genotyped and un-genotyped sires from Interbull resulted in an EBV correlation of 0.60, compared with 0.47 when only Interbull data were used. In all cases, GEBVs had higher correlations than traditional EBVs, and the highest correlations were for predictions from the ssGBLUP procedure using combined data (0.75), or with all available DRP from Interbull records only (one-step blending approach, 0.69). The ssGBLUP predictions using the first three domestic lactation records in the TD model were correlated with GMACE predictions by 0.69, 0.64 and 0

  5. Predicting breeding values in animals by kalman filter

    DEFF Research Database (Denmark)

    Karacaören, Burak; Janss, Luc; Kadarmideen, Haja

    2012-01-01

    The aim of this study was to investigate usefulness of Kalman Filter (KF) Random Walk methodology (KF-RW) for prediction of breeding values in animals. We used body condition score (BCS) from dairy cattle for illustrating use of KF-RW. BCS was measured by Swiss Holstein Breeding Association during...

  6. Genomic breeding value estimation using nonparametric additive regression models

    Directory of Open Access Journals (Sweden)

    Solberg Trygve

    2009-01-01

    Full Text Available Abstract Genomic selection refers to the use of genomewide dense markers for breeding value estimation and subsequently for selection. The main challenge of genomic breeding value estimation is the estimation of many effects from a limited number of observations. Bayesian methods have been proposed to successfully cope with these challenges. As an alternative class of models, non- and semiparametric models were recently introduced. The present study investigated the ability of nonparametric additive regression models to predict genomic breeding values. The genotypes were modelled for each marker or pair of flanking markers (i.e. the predictors separately. The nonparametric functions for the predictors were estimated simultaneously using additive model theory, applying a binomial kernel. The optimal degree of smoothing was determined by bootstrapping. A mutation-drift-balance simulation was carried out. The breeding values of the last generation (genotyped was predicted using data from the next last generation (genotyped and phenotyped. The results show moderate to high accuracies of the predicted breeding values. A determination of predictor specific degree of smoothing increased the accuracy.

  7. Reliabilities of genomic estimated breeding values in Danish Jersey

    DEFF Research Database (Denmark)

    Thomasen, Jørn Rind; Guldbrandtsen, Bernt; Su, Guosheng;

    2012-01-01

    In order to optimize the use of genomic selection in breeding plans, it is essential to have reliable estimates of the genomic breeding values. This study investigated reliabilities of direct genomic values (DGVs) in the Jersey population estimated by three different methods. The validation methods...... were (i) fivefold cross-validation and (ii) validation on the most recent 3 years of bulls. The reliability of DGV was assessed using squared correlations between DGV and deregressed proofs (DRPs). In the recent 3-year validation model, estimated reliabilities were also used to assess the reliabilities...... of DGV. The data set consisted of 1003 Danish Jersey bulls with conventional estimated breeding values (EBVs) for 14 different traits included in the Nordic selection index. The bulls were genotyped for Single-nucleotide polymorphism (SNP) markers using the Illumina 54 K chip. A Bayesian method was used...

  8. Breeding of value added barley by mutation and protein engineering

    International Nuclear Information System (INIS)

    Barley has been bred for food, feed and beverages over the past 5000 years by selecting for spontaneous mutations and random hybrids. Crosses with defined parents (since the turn of the century) and induced mutations (since 1927) have provided variability in selecting for novel varieties. Genetic transformation of barley has been a routine procedure since 1994 and permits the introduction of tailored genes for adding quality values to the grain. It complements, but does not replace, existing efficient breeding methods. Radiation and chemically induced mutations, as well as genes introduced by transformation, have to be fitted into the genome, which may take 50 years of breeding effort and testing for agronomic and industrial performance. The mutation breeding strategy for proanthocyanidin free malt barley, which has led to the commercial varieties Caminant and NFC 8808, is presented. As an example of the breeding strategy to improve barley endosperm cell wall degradation, a description is given of the protein engineering of a (1-3, 1-4)-β-glucanase towards heat stability and the insertion of the gene encoding this enzyme by genetic transformation. It is expected that such barley varieties will extend the use of the grain for beverage and feed uses as well as for the production of renewable raw materials by malting and mashing processes. (author). 34 refs, 1 tab

  9. Unique cultural values of Madura cattle: is cross-breeding a threat?

    NARCIS (Netherlands)

    Tri Satya Mastuti Widi, Tri; Udo, H.M.J.; Oldenbroek, J.K.; Budisatria, I.G.S.; Baliarti, E.; Zijpp, van der A.J.

    2013-01-01

    In Indonesia, cross-breeding local cattle with European beef breeds is widely promoted to stimulate beef production. This cross-breeding is threatening local breeds that have often different functions, including cultural roles. This study analysed the cultural values of Madura cattle and the effects

  10. Accuracies of genomically estimated breeding values from pure-breed and across-breed predictions in Australian beef cattle

    OpenAIRE

    Boerner, Vinzent; Johnston, David J.; Tier, Bruce

    2014-01-01

    International audience; AbstractBackgroundThe major obstacles for the implementation of genomic selection in Australian beef cattle are the variety of breeds and in general, small numbers of genotyped and phenotyped individuals per breed. The Australian Beef Cooperative Research Center (Beef CRC) investigated these issues by deriving genomic prediction equations (PE) from a training set of animals that covers a range of breeds and crosses including Angus, Murray Grey, Shorthorn, Hereford, Bra...

  11. Motives and values in farming local cattle breeds in Europe: a survey on 15 breeds

    NARCIS (Netherlands)

    Gandini, G.; Avon, L.; Bohte-Wilhelmus, D.I.; Bay, E.; Colinet, F.G.; Choroszy, Z.; Diaz, C.; Duclos, D.; Fernandez, J.; Gengler, N.; Hoving-Bolink, A.H.; Kearney, F.; Lilja, T.; Mäki-Tanila, A.; Martin-Collado, D.; Maurice - Van Eijndhoven, M.H.T.; Musella, M.; Pizzi, F.; Soini, K.; Toro, M.; Turri, F.; Viinalas, H.; Hiemstra, S.J.

    2010-01-01

    Within the EURECA project (Towards self-sustainable EUropean REgional CAttle breeds), we interviewed a total of 371 farmers of 15 local cattle breeds in eight European countries. Besides collecting data on farmers, land use, herd composition and economic role of cattle, we aimed at understanding far

  12. Practical value of the use of neutrons for crop breeding

    International Nuclear Information System (INIS)

    An induced mutant of rice (designated as M 41) resistant to the differential isolates of bacterial leaf blight (BLB), which had been obtained through use of thermal neutrons, was analyzed for the BLB resistance gene. The plants of F2 and F1 populations from the cross of the M 41 line/Harebare were raised along with the parents in the field and inoculated with the isolate, I, II, III and IV on their flag leaves at heading stage to be observed on the reactions of them to the inoculated isolates. In the F2 population, observed number of the resistant plants relative to the susceptible ones was found to be well fitted to 1 : 3 ratio, suggesting that the resistance of the mutant is conditioned by a single recessive gene. The gene was thought to be of the newly developed, because such a kind of gene has never been found in the world. Referring to the results on the genetic analysis, practical value of the use of neutrons in the crop breeding is discussed. (author)

  13. Breeding Value of Primary Synthetic Wheat Genotypes for Grain Yield

    Science.gov (United States)

    Jafarzadeh, Jafar; Bonnett, David; Jannink, Jean-Luc; Akdemir, Deniz; Dreisigacker, Susanne; Sorrells, Mark E.

    2016-01-01

    To introduce new genetic diversity into the bread wheat gene pool from its progenitor, Aegilops tauschii (Coss.) Schmalh, 33 primary synthetic hexaploid wheat genotypes (SYN) were crossed to 20 spring bread wheat (BW) cultivars at the International Wheat and Maize Improvement Center. Modified single seed descent was used to develop 97 populations with 50 individuals per population using first back-cross, biparental, and three-way crosses. Individuals from each cross were selected for short stature, early heading, flowering and maturity, minimal lodging, and free threshing. Yield trials were conducted under irrigated, drought, and heat-stress conditions from 2011 to 2014 in Ciudad Obregon, Mexico. Genomic estimated breeding values (GEBVs) of parents and synthetic derived lines (SDLs) were estimated using a genomic best linear unbiased prediction (GBLUP) model with markers in each trial. In each environment, there were SDLs that had higher GEBVs than their recurrent BW parent for yield. The GEBVs of BW parents for yield ranged from -0.32 in heat to 1.40 in irrigated trials. The range of the SYN parent GEBVs for yield was from -2.69 in the irrigated to 0.26 in the heat trials and were mostly negative across environments. The contribution of the SYN parents to improved grain yield of the SDLs was highest under heat stress, with an average GEBV for the top 10% of the SDLs of 0.55 while the weighted average GEBV of their corresponding recurrent BW parents was 0.26. Using the pedigree-based model, the accuracy of genomic prediction for yield was 0.42, 0.43, and 0.49 in the drought, heat and irrigated trials, respectively, while for the marker-based model these values were 0.43, 0.44, and 0.55. The SYN parents introduced novel diversity into the wheat gene pool. Higher GEBVs of progenies were due to introgression and retention of some positive alleles from SYN parents. PMID:27656893

  14. [Phenotypic trends and breeding values for canine congenital sensorineural deafness in Dalmatian dogs].

    Science.gov (United States)

    Blum, Meike; Distl, Ottmar

    2014-01-01

    In the present study, breeding values for canine congenital sensorineural deafness, the presence of blue eyes and patches have been predicted using multivariate animal models to test the reliability of the breeding values for planned matings. The dataset consisted of 6669 German Dalmatian dogs born between 1988 and 2009. Data were provided by the Dalmatian kennel clubs which are members of the German Association for Dog Breeding and Husbandry (VDH). The hearing status for all dogs was evaluated using brainstem auditory evoked potentials. The reliability using the prediction error variance of breeding values and the realized reliability of the prediction of the phenotype of future progeny born in each one year between 2006 and 2009 were used as parameters to evaluate the goodness of prediction through breeding values. All animals from the previous birth years were used for prediction of the breeding values of the progeny in each of the up-coming birth years. The breeding values based on pedigree records achieved an average reliability of 0.19 for the future 1951 progeny. The predictive accuracy (R2) for the hearing status of single future progeny was at 1.3%. Combining breeding values for littermates increased the predictive accuracy to 3.5%. Corresponding values for maternal and paternal half-sib groups were at 3.2 and 7.3%. The use of breeding values for planned matings increases the phenotypic selection response over mass selection. The breeding values of sires may be used for planned matings because reliabilities and predictive accuracies for future paternal progeny groups were highest.

  15. Significance of pH-value for meat quality of broilers: Influence of breed lines

    OpenAIRE

    Ristic M.; Damme K.

    2013-01-01

    For determination of poultry quality shortly after slaughtering, physical criteria (pH-value, conductivity, colour, juice retention) are of importance. However, they are affected by breeding, transport, cooling and the storage period. PH-values of breast meat (genetically structured material) were recorded shortly after slaughtering (15 min p.m.) and differences between breeding line and gender were found (n=5109). The pH1-values ranged from 5.50 to 6.79. M...

  16. Hot topic: Definition and implementation of a breeding value for feed efficiency in dairy cows.

    Science.gov (United States)

    Pryce, J E; Gonzalez-Recio, O; Nieuwhof, G; Wales, W J; Coffey, M P; Hayes, B J; Goddard, M E

    2015-10-01

    A new breeding value that combines the amount of feed saved through improved metabolic efficiency with predicted maintenance requirements is described. The breeding value includes a genomic component for residual feed intake (RFI) combined with maintenance requirements calculated from either a genomic or pedigree estimated breeding value (EBV) for body weight (BW) predicted using conformation traits. Residual feed intake is only available for genotyped Holsteins; however, BW is available for all breeds. The RFI component of the "feed saved" EBV has 2 parts: Australian calf RFI and Australian lactating cow RFI. Genomic breeding values for RFI were estimated from a reference population of 2,036 individuals in a multi-trait analysis including Australian calf RFI (n=843), Australian lactating cow RFI (n=234), and UK and Dutch lactating cow RFI (n=958). In all cases, the RFI phenotypes were deviations from a mean of 0, calculated by correcting dry matter intake for BW, growth, and milk yield (in the case of lactating cows). Single nucleotide polymorphism effects were calculated from the output of genomic BLUP and used to predict breeding values of 4,106 Holstein sires that were genotyped but did not have RFI phenotypes themselves. These bulls already had BW breeding values calculated from type traits, from which maintenance requirements in kilograms of feed per year were inferred. Finally, RFI and the feed required for maintenance (through BW) were used to calculate a feed saved breeding value and expressed as the predicted amount of feed saved per year. Animals that were 1 standard deviation above the mean were predicted to eat 66 kg dry matter less per year at the same level of milk production. In a data set of genotyped Holstein sires, the mean reliability of the feed saved breeding value was 0.37. For Holsteins that are not genotyped and for breeds other than Holsteins, feed saved is calculated using BW only. From April 2015, feed saved has been included as part of

  17. Hot topic: Definition and implementation of a breeding value for feed efficiency in dairy cows.

    Science.gov (United States)

    Pryce, J E; Gonzalez-Recio, O; Nieuwhof, G; Wales, W J; Coffey, M P; Hayes, B J; Goddard, M E

    2015-10-01

    A new breeding value that combines the amount of feed saved through improved metabolic efficiency with predicted maintenance requirements is described. The breeding value includes a genomic component for residual feed intake (RFI) combined with maintenance requirements calculated from either a genomic or pedigree estimated breeding value (EBV) for body weight (BW) predicted using conformation traits. Residual feed intake is only available for genotyped Holsteins; however, BW is available for all breeds. The RFI component of the "feed saved" EBV has 2 parts: Australian calf RFI and Australian lactating cow RFI. Genomic breeding values for RFI were estimated from a reference population of 2,036 individuals in a multi-trait analysis including Australian calf RFI (n=843), Australian lactating cow RFI (n=234), and UK and Dutch lactating cow RFI (n=958). In all cases, the RFI phenotypes were deviations from a mean of 0, calculated by correcting dry matter intake for BW, growth, and milk yield (in the case of lactating cows). Single nucleotide polymorphism effects were calculated from the output of genomic BLUP and used to predict breeding values of 4,106 Holstein sires that were genotyped but did not have RFI phenotypes themselves. These bulls already had BW breeding values calculated from type traits, from which maintenance requirements in kilograms of feed per year were inferred. Finally, RFI and the feed required for maintenance (through BW) were used to calculate a feed saved breeding value and expressed as the predicted amount of feed saved per year. Animals that were 1 standard deviation above the mean were predicted to eat 66 kg dry matter less per year at the same level of milk production. In a data set of genotyped Holstein sires, the mean reliability of the feed saved breeding value was 0.37. For Holsteins that are not genotyped and for breeds other than Holsteins, feed saved is calculated using BW only. From April 2015, feed saved has been included as part of

  18. Genetic parameters and breeding values for semen characteristics in Hanoverian stallions.

    Science.gov (United States)

    Labitzke, D; Sieme, H; Martinsson, G; Distl, O

    2014-08-01

    The objectives of this study were to show whether semen traits of 30 Hanoverian stallions regularly used in AI may be useful for breeding purposes. Semen characteristics were studied using 15 149 ejaculates from 30 Hanoverian stallions of the State Stud Celle of Lower Saxony. Semen samples were collected between 2005 and 2009. Traits analysed were gel-free volume, sperm concentration, total and motile sperm number and progressive motility. A linear multivariate animal model was employed to estimate heritabilities and permanent environmental variances for stallions. The same model was used to predict breeding values for all traits simultaneously. Heritabilities were high for gel-free volume (h(2) = 0.43) and moderate for total number of sperm (h(2) = 0.29) and progressive motility (h(2) = 0.20). Gel-free volume, sperm concentration and total number of sperm were genetically negatively correlated with progressive motility. The effect of the permanent environment for stallions accounted for 9-55% of the trait variance. The total variance among stallions explained 37-69% of the trait variance. The average reliabilities of the breeding values were 0.43-0.76 for the 30 Hanoverian stallions. In conclusion, the study could demonstrate large effects of stallions, routinely employed in a breeding programme, on semen characteristics analysed here. We could demonstrate that estimated breeding values (EBV) with sufficient high reliabilities can be predicted using data from these stallions and these EBV are useful in horse breeding programmes to achieve genetic improvement in semen quality.

  19. Inbreeding in Swiss Braunvieh and its influence on breeding values predicted from a repeatability animal model.

    Science.gov (United States)

    Casanova, L; Hagger, C; Kuenzi, N; Schneeberger, M

    1992-04-01

    Inbreeding coefficients were computed for 910,444 animals of the Swiss Braunvieh population. Of the animals born in 1984, 71.5% were inbred with 67.9, 3.4, and .2% having inbreeding coefficients between greater than 0 and 5%, greater than 5 to 10%, and greater than 10%, respectively. The average inbreeding coefficient was 1.14% but, for animals with both parents and at least one grandparent known, it was 1.67%. Breeding values for total milk, fat, and protein yields and for fat and protein percentages were predicted using a repeatability animal model including a regression on the inbreeding coefficient. Phenotypic performance was sizeably depressed for milk yield only (-26 kg/% of inbreeding or 2.4% of the phenotypic standard deviation). Adjusting for inbreeding increased the estimated genetic trend slightly. Inbreeding is only partially accounted for when it is ignored in the construction of the inverse of the numerator relationship matrix. This effect was investigated by comparing predicted breeding values from a model including the complete matrix with predicted breeding values from a model including a matrix constructed with inbreeding ignored. Only .8% of all predicted breeding values were affected by more than +/- 5.5 kg. The maximum difference observed was 55.3 kg. The observed average absolute differences between the breeding values of offspring predicted with the two models increased with inbreeding of parents.

  20. Simultaneous QTL detection and genomic breeding value estimation using high density SNP chips

    Directory of Open Access Journals (Sweden)

    Veerkamp Roel F

    2010-03-01

    Full Text Available Abstract Background The simulated dataset of the 13th QTL-MAS workshop was analysed to i detect QTL and ii predict breeding values for animals without phenotypic information. Several parameterisations considering all SNP simultaneously were applied using Gibbs sampling. Results Fourteen QTL were detected at the different time points. Correlations between estimated breeding values were high between models, except when the model was used that assumed that all SNP effects came from one distribution. The model that used the selected 14 SNP found associated with QTL, gave close to unity correlations with the full parameterisations. Conclusions Nine out of 18 QTL were detected, however the six QTL for inflection point were missed. Models for genomic selection were indicated to be fairly robust, e.g. with respect to accuracy of estimated breeding values. Still, it is worthwhile to investigate the number QTL underlying the quantitative traits, before choosing the model used for genomic selection.

  1. A sampling method for estimating the accuracy of predicted breeding values in genetic evaluation

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    Laloë Denis

    2001-09-01

    Full Text Available Abstract A sampling-based method for estimating the accuracy of estimated breeding values using an animal model is presented. Empirical variances of true and estimated breeding values were estimated from a simulated n-sample. The method was validated using a small data set from the Parthenaise breed with the estimated coefficient of determination converging to the true values. It was applied to the French Salers data file used for the 2000 on-farm evaluation (IBOVAL of muscle development score. A drawback of the method is its computational demand. Consequently, convergence can not be achieved in a reasonable time for very large data files. Two advantages of the method are that a it is applicable to any model (animal, sire, multivariate, maternal effects... and b it supplies off-diagonal coefficients of the inverse of the mixed model equations and can therefore be the basis of connectedness studies.

  2. Comparison between genomic predictions using daughter yield deviation and conventional estimated breeding value as response variables

    DEFF Research Database (Denmark)

    Guo, Gang; Lund, Mogens Sandø; Zhang, Y;

    2010-01-01

    This study compared genomic predictions using conventional estimated breeding values (EBV) and daughter yield deviations (DYD) as response variables based on simulated data. Eight scenarios were simulated in regard to heritability (0.05 and 0.30), number of daughters per sire (30, 100, and unequal......), the EBV and DYD approaches provided similar genomic estimated breeding value (GEBV) reliabilities, except for scenarios with unequal numbers of daughters and half of sires without genotype, for which the EBV approach was superior to the DYD approach (by 1.2 and 2.4%). Using a Bayesian mixture prior model...

  3. Preliminary investigation on reliability of genomic estimated breeding values in the Danish and Swedish Holstein Population

    DEFF Research Database (Denmark)

    Su, G; Guldbrandtsen, B; Gregersen, V R;

    2010-01-01

    Abstract This study investigated the reliability of genomic estimated breeding values (GEBV) in the Danish Holstein population. The data in the analysis included 3,330 bulls with both published conventional EBV and single nucleotide polymorphism (SNP) markers. After data editing, 38,134 SNP markers...... or no effects, and a single prior distribution common for all SNP. It was found that, in general, the model with a common prior distribution of scaling factors had better predictive ability than any mixture prior models. Therefore, a common prior model was used to estimate SNP effects and breeding values...

  4. Estimated breeding values and genetic trend for milk yield in Nili Ravi buffaloes

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    M. Ahmad

    2010-02-01

    Full Text Available Data on 263 pedigrees, breeding and performance records of 98 Nili-Ravi Buffaloes maintained at Livestock Experiment Station, Bahadurnagar, Okara, Punjab, Pakistan during the period 1991 to 2002 were utilized in this study to identify the high yielding elite buffaloes/bull mothers (dams to retain for further breeding for the on going progeny testing program in the country. The lactation records up to 6th parity were used for the analysis. The data were analyzed through Best Linear Unbiased Predictions (BLUP procedure. The breeding values were estimated by using Restricted Maximum Likelihood (REML procedure fitting Individual Animal Model. The least squares mean for lactation milk yield was 2462.92 ± 195.93 kg. The average lactation length was 340.57 ± 61.70 days. Out of 98 buffaloes, 48 had positive breeding values (EBVs+. Within these 48 buffaloes (EBVs+, 16 were declared as elite buffaloes. The estimated breeding values for milk yield from animal model evaluations ranged from –922 to +2954 kg. The over all genetic trend for milk yield was found positive.

  5. Comparison of slaughter value and muscle properties of selected cattle breeds in Poland - Revue

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    Edward Pośpiech

    2010-03-01

    Full Text Available The aim of the paper was the comparison of slaughter value and muscle properties of dual-purpose cattle most common in Poland with that of beef type, from which high quality culinary meat is obtained. Four breeds were compared: two of them were dual-purpose type i.e. Holstein-Fresian of Black and White variety and Polish Red and the other two – of beef type i.e. Limousine and Hereford. There are discussed factors influencing cattle slaughter value and muscle properties, i.e. the impact of the utility type, gender, age, feeding systems, as well as maturation rate of animals. The slaughter value was presented using the dressing percentage and the content of main components in the carcass i.e. the muscle tissue, fat and bones. The tissue composition of analysed cattle breeds and the share of main cuts in their carcasses were presented. Higher daily gains of beef type or dual-purpose breeds are connected with a higher number of muscle fibers (hyperplasia and also with a bigger size of their diameter (hypertrophy. These phenomena are accompanied by increased lightness of meat colour what is the result of changes in the muscle fibers metabolism and the proportion of myosin heavy chains (MHC of the I, IIa and IIx type. Observed differences in the slaughter value existed not only between breeds, but also inside them indicating the need for further improvement of animal selection and deeper analysis of factors influencing it. It was stated that the amount of culinary meat obtained from carcasses may be increased not only through the selection of corresponding genotypes, but also through the modification of the system of carcass cutting. The performed analysis of the slaughter value emphasizes special significance of the domestic Polish Red cattle also as a breed for production of good quality meat similar to beef cattle breeds.

  6. A comparison of phenotypic traits related to trypanotolerance in five west african cattle breeds highlights the value of shorthorn taurine breeds.

    Directory of Open Access Journals (Sweden)

    David Berthier

    Full Text Available Animal African Trypanosomosis particularly affects cattle and dramatically impairs livestock development in sub-Saharan Africa. African Zebu (AFZ or European taurine breeds usually die of the disease in the absence of treatment, whereas West African taurine breeds (AFT, considered trypanotolerant, are able to control the pathogenic effects of trypanosomosis. Up to now, only one AFT breed, the longhorn N'Dama (NDA, has been largely studied and is considered as the reference trypanotolerant breed. Shorthorn taurine trypanotolerance has never been properly assessed and compared to NDA and AFZ breeds.This study compared the trypanotolerant/susceptible phenotype of five West African local breeds that differ in their demographic history. Thirty-six individuals belonging to the longhorn taurine NDA breed, two shorthorn taurine Lagune (LAG and Baoulé (BAO breeds, the Zebu Fulani (ZFU and the Borgou (BOR, an admixed breed between AFT and AFZ, were infected by Trypanosoma congolense IL1180. All the cattle were genetically characterized using dense SNP markers, and parameters linked to parasitaemia, anaemia and leukocytes were analysed using synthetic variables and mixed models. We showed that LAG, followed by NDA and BAO, displayed the best control of anaemia. ZFU showed the greatest anaemia and the BOR breed had an intermediate value, as expected from its admixed origin. Large differences in leukocyte counts were also observed, with higher leukocytosis for AFT. Nevertheless, no differences in parasitaemia were found, except a tendency to take longer to display detectable parasites in ZFU.We demonstrated that LAG and BAO are as trypanotolerant as NDA. This study highlights the value of shorthorn taurine breeds, which display strong local adaptation to trypanosomosis. Thanks to further analyses based on comparisons of the genome or transcriptome of the breeds, these results open up the way for better knowledge of host-pathogen interactions and

  7. Evaluation of random forest regression for prediction of breeding value from genomewide SNPs

    Indian Academy of Sciences (India)

    Rupam Kumar Sarkar; A. R. Rao; Prabina Kumar Meher; T. Nepolean; T. Mohapatra

    2015-06-01

    Genomic prediction is meant for estimating the breeding value using molecular marker data which has turned out to be a powerful tool for efficient utilization of germplasm resources and rapid improvement of cultivars. Model-based techniques have been widely used for prediction of breeding values of genotypes from genomewide association studies. However, application of the random forest (RF), a model-free ensemble learning method, is not widely used for prediction. In this study, the optimum values of tuning parameters of RF have been identified and applied to predict the breeding value of genotypes based on genomewide single-nucleotide polymorphisms (SNPs), where the number of SNPs ($P$ variables) is much higher than the number of genotypes ($n$ observations) ($P >> n$). Further, a comparison was made with the model-based genomic prediction methods, namely, least absolute shrinkage and selection operator (LASSO), ridge regression (RR) and elastic net (EN) under $P >> n$. It was found that the correlations between the predicted and observed trait response were 0.591, 0.539, 0.431 and 0.587 for RF, LASSO, RR and EN, respectively, which implies superiority of the RF over the model-based techniques in genomic prediction. Hence, we suggest that the RF methodology can be used as an alternative to the model-based techniques for the prediction of breeding value at genome level with higher accuracy.

  8. Prediction of Genomic Breeding Values for feed efficiency and related traits in pigs

    DEFF Research Database (Denmark)

    Do, Duy Ngoc; Janss, Luc; Strathe, Anders Bjerring;

    Improvement of feed efficiency is essential in pig breeding and selection for reduced residual feed intake (RFI) is an option. Accuracy of genomic prediction (GP) relies on assumptions of genetic architecture of the traits. This study applied five different Bayesian Power LASSO (BPL) models with...... different power parameters to investigate genetic architecture of RFI, to predict genomic breeding values, and to partition genetic variances for different SNP groups. Data were 1272 Duroc pigs with both genotypic and phenotypic records for RFI as well as daily feed intake (DFI). The gene mapping confirmed...

  9. Accuracy of direct genomic breeding values for nationally evaluated traits in US Limousin and Simmental beef cattle

    Directory of Open Access Journals (Sweden)

    Saatchi Mahdi

    2012-12-01

    Full Text Available Abstract Background In national evaluations, direct genomic breeding values can be considered as correlated traits to those for which phenotypes are available for traditional estimation of breeding values. For this purpose, estimates of the accuracy of direct genomic breeding values expressed as genetic correlations between traits and their respective direct genomic breeding values are required. Methods We derived direct genomic breeding values for 2239 registered Limousin and 2703 registered Simmental beef cattle genotyped with either the Illumina BovineSNP50 BeadChip or the Illumina BovineHD BeadChip. For the 264 Simmental animals that were genotyped with the BovineHD BeadChip, genotypes for markers present on the BovineSNP50 BeadChip were extracted. Deregressed estimated breeding values were used as observations in weighted analyses that estimated marker effects to derive direct genomic breeding values for each breed. For each breed, genotyped individuals were clustered into five groups using K-means clustering, with the aim of increasing within-group and decreasing between-group pedigree relationships. Cross-validation was performed five times for each breed, using four groups for training and the fifth group for validation. For each trait, we then applied a weighted bivariate analysis of the direct genomic breeding values of genotyped animals from all five validation sets and their corresponding deregressed estimated breeding values to estimate variance and covariance components. Results After minimizing relationships between training and validation groups, estimated genetic correlations between each trait and its direct genomic breeding values ranged from 0.39 to 0.76 in Limousin and from 0.29 to 0.65 in Simmental. The efficiency of selection based on direct genomic breeding values relative to selection based on parent average information ranged from 0.68 to 1.28 in genotyped Limousin and from 0.51 to 1.44 in genotyped Simmental animals

  10. Significance of pH-value for meat quality of broilers: Influence of breed lines

    Directory of Open Access Journals (Sweden)

    Ristic M.

    2013-01-01

    Full Text Available For determination of poultry quality shortly after slaughtering, physical criteria (pH-value, conductivity, colour, juice retention are of importance. However, they are affected by breeding, transport, cooling and the storage period. PH-values of breast meat (genetically structured material were recorded shortly after slaughtering (15 min p.m. and differences between breeding line and gender were found (n=5109. The pH1-values ranged from 5.50 to 6.79. Male broilers showed significantly lower pH1-values than female ones (6.02:6.10. There were also significant differences concerning breeding line and gender. Meat quality (PSE, DFD of broilers can be recorded quickly and accurately determining the pH1-value of breast meat. Threshold ranges to be considered are ≤ 5.8 (PSE, 5.9-6.2 (standard meat properties and ≥ 6.3 (DFD. This classification is not to be compared to the deviation of pork.

  11. Economic values of body weight, reproduction and parasite resistance traits for a Creole goat breeding goal.

    Science.gov (United States)

    Gunia, M; Mandonnet, N; Arquet, R; Alexandre, G; Gourdine, J-L; Naves, M; Angeon, V; Phocas, F

    2013-01-01

    A specific breeding goal definition was developed for Creole goats in Guadeloupe. This local breed is used for meat production. To ensure a balanced selection outcome, the breeding objective included two production traits, live weight (BW11) and dressing percentage (DP) at 11 months (the mating or selling age), one reproduction trait, fertility (FER), and two traits to assess animal response to parasite infection: packed cell volume (PCV), a resilience trait, and faecal worm eggs count (FEC), a resistance trait. A deterministic bio-economic model was developed to calculate the economic values based on the description of the profit of a Guadeloupean goat farm. The farm income came from the sale of animals for meat or as reproducers. The main costs were feeding and treatments against gastro-intestinal parasites. The economic values were 7.69€ per kg for BW11, 1.38€ per % for FER, 3.53€ per % for DP and 3 × 10(-4)€ per % for PCV. The economic value for FEC was derived by comparing the expected profit and average FEC in a normal situation and in an extreme situation where parasites had developed resistance to anthelmintics. This method yielded a maximum weighting for FEC, which was -18.85€ per log(eggs per gram). Alternative scenarios were tested to assess the robustness of the economic values to variations in the economic and environmental context. The economic values of PCV and DP were the most stable. Issues involved in paving the way for selective breeding on resistance or resilience to parasites are discussed. PMID:23031546

  12. Piglet use of the creep area - Effects of breeding value and farrowing environment

    DEFF Research Database (Denmark)

    Vasdal, Guro; Andersen, Inger Lise; Pedersen, Lene Juul

    2009-01-01

    The objective of this study was to investigate piglet use of the creep area, comparing litters of sows with a high vs. low breeding value for piglet survival in the first 5 days postpartum, that were either housed in crates or individual pens during farrowing and lactation. Seventy-five Yorkshire...... × Danish Landrace sows were video recorded for 4 days after farrowing, and the analysis was conducted using instantaneous sampling every 10 min commencing 24 h after the birth of the first piglet for a period of 72 h. Breeding value for piglet survival had no effect on piglet use of the creep area or time spent...... in any location of the farrowing environment. Farrowing environment had significant effects on piglet location; during all days there were significantly more piglets in the creep area in the crates compared to the pens (P 

  13. Prediction of rates of inbreeding in populations selected on best linear unbiased prediction of breeding value.

    OpenAIRE

    Bijma, P.; Woolliams, John

    2000-01-01

    Predictions for the rate of inbreeding (DeltaF) in populations with discrete generations undergoing selection on best linear unbiased prediction (BLUP) of breeding value were developed. Predictions were based on the concept of long-term genetic contributions using a recently established relationship between expected contributions and rates of inbreeding and a known procedure for predicting expected contributions. Expected contributions of individuals were predicted using a linear model, u(i)(...

  14. Prediction of breeding values for dairy cattle using artificial neural networks and neuro-fuzzy systems.

    Science.gov (United States)

    Shahinfar, Saleh; Mehrabani-Yeganeh, Hassan; Lucas, Caro; Kalhor, Ahmad; Kazemian, Majid; Weigel, Kent A

    2012-01-01

    Developing machine learning and soft computing techniques has provided many opportunities for researchers to establish new analytical methods in different areas of science. The objective of this study is to investigate the potential of two types of intelligent learning methods, artificial neural networks and neuro-fuzzy systems, in order to estimate breeding values (EBV) of Iranian dairy cattle. Initially, the breeding values of lactating Holstein cows for milk and fat yield were estimated using conventional best linear unbiased prediction (BLUP) with an animal model. Once that was established, a multilayer perceptron was used to build ANN to predict breeding values from the performance data of selection candidates. Subsequently, fuzzy logic was used to form an NFS, a hybrid intelligent system that was implemented via a local linear model tree algorithm. For milk yield the correlations between EBV and EBV predicted by the ANN and NFS were 0.92 and 0.93, respectively. Corresponding correlations for fat yield were 0.93 and 0.93, respectively. Correlations between multitrait predictions of EBVs for milk and fat yield when predicted simultaneously by ANN were 0.93 and 0.93, respectively, whereas corresponding correlations with reference EBV for multitrait NFS were 0.94 and 0.95, respectively, for milk and fat production.

  15. Accuracy of genomic breeding values for meat tenderness in Polled Nellore cattle.

    Science.gov (United States)

    Magnabosco, C U; Lopes, F B; Fragoso, R C; Eifert, E C; Valente, B D; Rosa, G J M; Sainz, R D

    2016-07-01

    Zebu () cattle, mostly of the Nellore breed, comprise more than 80% of the beef cattle in Brazil, given their tolerance of the tropical climate and high resistance to ectoparasites. Despite their advantages for production in tropical environments, zebu cattle tend to produce tougher meat than Bos taurus breeds. Traditional genetic selection to improve meat tenderness is constrained by the difficulty and cost of phenotypic evaluation for meat quality. Therefore, genomic selection may be the best strategy to improve meat quality traits. This study was performed to compare the accuracies of different Bayesian regression models in predicting molecular breeding values for meat tenderness in Polled Nellore cattle. The data set was composed of Warner-Bratzler shear force (WBSF) of longissimus muscle from 205, 141, and 81 animals slaughtered in 2005, 2010, and 2012, respectively, which were selected and mated so as to create extreme segregation for WBSF. The animals were genotyped with either the Illumina BovineHD (HD; 777,000 from 90 samples) chip or the GeneSeek Genomic Profiler (GGP Indicus HD; 77,000 from 337 samples). The quality controls of SNP were Hard-Weinberg Proportion -value ≥ 0.1%, minor allele frequency > 1%, and call rate > 90%. The FImpute program was used for imputation from the GGP Indicus HD chip to the HD chip. The effect of each SNP was estimated using ridge regression, least absolute shrinkage and selection operator (LASSO), Bayes A, Bayes B, and Bayes Cπ methods. Different numbers of SNP were used, with 1, 2, 3, 4, 5, 7, 10, 20, 40, 60, 80, or 100% of the markers preselected based on their significance test (-value from genomewide association studies [GWAS]) or randomly sampled. The prediction accuracy was assessed by the correlation between genomic breeding value and the observed WBSF phenotype, using a leave-one-out cross-validation methodology. The prediction accuracies using all markers were all very similar for all models, ranging from 0

  16. Canine hip dysplasia: phenotypic scoring and the role of estimated breeding value analysis.

    Science.gov (United States)

    Soo, M; Worth, Aj

    2015-03-01

    Canine hip dysplasia (CHD) is a developmental orthopaedic disease of the coxofemoral joints with a multifactorial mode of inheritance. Multiple gene effects are influenced by environmental factors; therefore, it is unlikely that a simple genetic screening test with which to identify susceptible individuals will be developed in the near future. In the absence of feasible methods for objectively quantifying clinical CHD, radiographic techniques have been developed and widely used to identify dogs for breeding which are less affected by the disease. A hip-extended ventrodorsal view of the pelvis has been traditionally used to identify dogs with subluxation and/or osteoarthritis of the coxofemoral joints. More recently, there has been emphasis on the role of coxofemoral joint laxity as a determinant of CHD and methods have been developed to measure passive hip laxity. Though well-established worldwide, the effectiveness of traditional phenotypic scoring schemes in reducing the prevalence of CHD has been variable. The most successful implementation of traditional CHD scoring has occurred in countries or breeding colonies with mandatory scoring and open registries with access to pedigree records. Several commentators have recommended that for quantitative traits like CHD, selection of breeding stock should be based on estimated breeding values (EBV) rather than individual hip score/grade. The EBV is a reflection of the genetic superiority of an animal compared to its counterparts and is calculated from the phenotype of an individual and its relatives and their pedigree relationship. Selecting breeding stock on the basis of a dog's genetic merit, ideally based on a highly predictive phenotype, will confer the breeder with greater selection power, accelerate genetic improvement towards better hip conformation and thus more likely decrease the prevalence of CHD.

  17. Accuracy of genomic prediction using deregressed breeding values estimated from purebred and crossbred offspring phenotypes in pigs

    NARCIS (Netherlands)

    Marubayashi Hidalgo, A.; Bastiaansen, J.W.M.; Soares Lopes, M.; Veroneze, R.; Groenen, M.A.M.; Koning, de D.J.

    2015-01-01

    Genomic selection is applied to dairy cattle breeding to improve the genetic progress of purebred (PB) animals, whereas in pigs and poultry the target is a crossbred (CB) animal for which a different strategy appears to be needed. The source of information used to estimate the breeding values, i.e.,

  18. Deriving Genomic Breeding Values for Residual Feed Intake from Covariance Functions of Random Regression Models

    DEFF Research Database (Denmark)

    Strathe, Anders B; Mark, Thomas; Nielsen, Bjarne;

    Random regression models were used to estimate covariance functions between cumulated feed intake (CFI) and body weight (BW) in 8424 Danish Duroc pigs. Random regressions on second order Legendre polynomials of age were used to describe genetic and permanent environmental curves in BW and CFI. Ba......% of the genetic variance in feed intake, revealing that a minor component of feed intake was genetically independent of maintenance and growth. In conclusion, the approach derived herein led to a consistent definition of RFI, where genomic breeding values were easily obtained...

  19. ESTIMATION OF BREEDING VALUES OF SAHIWAL CATTLE USING TEST DAY MILK YIELDS

    Directory of Open Access Journals (Sweden)

    M. S. KHAN, G. BILAL, I. R. BAJWA, Z. REHMAN1 AND S. AHMAD2

    2008-07-01

    Full Text Available Estimated breeding values of test-day (TD and 305-day milk yield were calculated to compare ranking of animals on the basis of two information sources under an animal model. Two statistical models were used to analyze 780 first lactation (305-day and monthly milk yield records. The first model was an individual animal model to analyze lactation milk yield with period-season of calving as fixed effect, while the second model was a repeatability model where monthly milk yield records were analyzed using period-season of calving as fixed effect and animals’ additive genetic effect and permanent environmental effect as random factors. In this model, the age at calving, ratio of days in milk to 305-day (as linear and quadratic components and their reciprocal logs were used as covariables. Ranking of animals for estimated breeding values from the two models was compared. The rank correlations were 0.927 and 0.923 for sires and cows, respectively. Largest rank shift measured in sires and cows showed that ranking of sire was affected less than that of cows. Phenotypic and genetic correlations did not show any clear pattern due to limited number of observations. Higher values of rank correlations suggested that TD milk yields could be used instead of 305-day lactation yields for genetic evaluation of sires and cows. Detailed studies involving larger data sets were however, suggested for validation of results.

  20. Determination of non-market values to inform conservation strategies for the threatened Alistana-Sanabresa cattle breed.

    Science.gov (United States)

    Martin-Collado, D; Diaz, C; Drucker, A G; Carabaño, M J; Zander, K K

    2014-08-01

    Livestock breed-related public good functions are often used to justify support for endangered breed conservation despite the fact that little is known about such non-market values. We show how stated preference techniques can be used to assess the non-market values that people place on livestock breeds. Through the application of a case study choice experiment survey in Zamora province, Spain, the total economic value (TEV) of the threatened Alistana-Sanabresa (AS) cattle breed was investigated. An analysis of the relative importance of the non-market components of its TEV and an assessment of the socio-economic variables that influence people's valuation of such components is used to inform conservation strategy design. Overall, the findings reveal that the AS breed had significant non-market values associated with it and that the value that respondents placed on each specific public good function also varied significantly. Functions related with indirect use cultural and existence values were much more highly valued than landscape maintenance values. These high cultural and existence values (totalling over 80% of TEV) suggest that an AS in situ conservation strategy will be required to secure such values. As part of such a strategy, incentive mechanisms will be needed to permit farmers to capture some of these public good values and thus be able to afford to maintain breed population numbers at socially desirable levels. One such mechanism could be related to the development of breed-related agritourism initiatives, with a view to enhancing private good values and providing an important addition to continued direct support. Where linked with cultural dimensions, niche product market development, including through improving AS breed-related product quality and brand recognition may also have a role to play as part of such an overall conservation and use strategy. We conclude that livestock breed conservation strategies with the highest potential to maximise

  1. Estimation of genetic parameters and breeding values across challenged environments to select for robust pigs.

    Science.gov (United States)

    Herrero-Medrano, J M; Mathur, P K; ten Napel, J; Rashidi, H; Alexandri, P; Knol, E F; Mulder, H A

    2015-04-01

    Robustness is an important issue in the pig production industry. Since pigs from international breeding organizations have to withstand a variety of environmental challenges, selection of pigs with the inherent ability to sustain their productivity in diverse environments may be an economically feasible approach in the livestock industry. The objective of this study was to estimate genetic parameters and breeding values across different levels of environmental challenge load. The challenge load (CL) was estimated as the reduction in reproductive performance during different weeks of a year using 925,711 farrowing records from farms distributed worldwide. A wide range of levels of challenge, from favorable to unfavorable environments, was observed among farms with high CL values being associated with confirmed situations of unfavorable environment. Genetic parameters and breeding values were estimated in high- and low-challenge environments using a bivariate analysis, as well as across increasing levels of challenge with a random regression model using Legendre polynomials. Although heritability estimates of number of pigs born alive were slightly higher in environments with extreme CL than in those with intermediate levels of CL, the heritabilities of number of piglet losses increased progressively as CL increased. Genetic correlations among environments with different levels of CL suggest that selection in environments with extremes of low or high CL would result in low response to selection. Therefore, selection programs of breeding organizations that are commonly conducted under favorable environments could have low response to selection in commercial farms that have unfavorable environmental conditions. Sows that had experienced high levels of challenge at least once during their productive life were ranked according to their EBV. The selection of pigs using EBV ignoring environmental challenges or on the basis of records from only favorable environments

  2. Analysis and Research on the Functional Value and Development Opportunities of Hainan National Breeding and Multiplication

    Institute of Scientific and Technical Information of China (English)

    Guanming; CHEN; Yaqiong; LIN; Jinsong; LI; Liping; WANG

    2013-01-01

    To further specify significance and development orientation of Hainan National Breeding and Multiplication ( hereinafter referred to as HNBM) ,such concepts as value engineering,industrial cluster and regional economy were introduced by analyzing its properties and interpreting relevant policies,its functions,value and development opportunities were analyzed from multiple perspectives. According to the comprehensive analysis,HNBM concerns national core political and economic benefits in strategic and fundamental sense,which is a result of powerful comprehensive functions of HNBM and need of modern agricultural development. In addition,HNBM has a bottleneck in the development of industrial cluster. Only co-promoted by the province and the ministry,and by applying top-level design,breaking the conditionality,integrating and optimizing existing resources,HNBM will be constructed into a high-new seed industry center.

  3. Why breeding values estimated using familial data should not be used for genome-wide association studies.

    Science.gov (United States)

    Ekine, Chinyere C; Rowe, Suzanne J; Bishop, Stephen C; de Koning, Dirk-Jan

    2014-02-19

    In animal breeding, the genetic potential of an animal is summarized as its estimated breeding value, which is derived from its own performance as well as the performance of related individuals. Here, we illustrate why estimated breeding values are not suitable as a phenotype for genome-wide association studies. We simulated human-type and pig-type pedigrees with a range of quantitative trait loci (QTL) effects (0.5-3% of phenotypic variance) and heritabilities (0.3-0.8). We analyzed 1000 replicates of each scenario with four models: (a) a full mixed model including a polygenic effect, (b) a regression analysis using the residual of a mixed model as a trait score (so called GRAMMAR approach), (c) a regression analysis using the estimated breeding value as a trait score, and (d) a regression analysis that uses the raw phenotype as a trait score. We show that using breeding values as a trait score gives very high false-positive rates (up 14% in human pedigrees and >60% in pig pedigrees). Simulations based on a real pedigree show that additional generations of pedigree increase the type I error. Including the family relationship as a random effect provides the greatest power to detect QTL while controlling for type I error at the desired level and providing the most accurate estimates of the QTL effect. Both the use of residuals and the use of breeding values result in deflated estimates of the QTL effect. We derive the contributions of QTL effects to the breeding value and residual and show how this affects the estimates.

  4. The Value of Different GA Insensitive Rht Dwarfing Genes in Winter Wheat Breeding

    Institute of Scientific and Technical Information of China (English)

    LI Xing-pu; LIU Yu-ping; LAN Su-que; Worland T J

    2004-01-01

    The value of different dwarfing genes in winter wheat breeding was studied using 6 nearisogenic lines carrying different Rht dwarfing genes over three years experiment.Results showed that both the Rhtl and Rht2 semi-dwarfing genes had significantly positive effects on kernel number and grain weight per spike, and had significantly negative effects on 1 000-grain weight comparing to the tall line(rht) and the Rht3 line.The Rht3 dwarfing gene had a significantly negative effect on kernel number per spike,and had positive effect on 1 000-grain weight. The combination of the Rht2 and Rht3 gene showed significantly negative effect on yield components. All of these 5 dwarfing or semidwarfing genotypes mentioned above had a significantly negative effect on plant height and no significant effect on the area of flag leaf, spikelets per spike and spike length.

  5. Effect of imputing markers from a low-density chip on the reliability of genomic breeding values in Holstein populations

    DEFF Research Database (Denmark)

    Dassonneville, R; Brøndum, Rasmus Froberg; Druet, T;

    2011-01-01

    The purpose of this study was to investigate the imputation error and loss of reliability of direct genomic values (DGV) or genomically enhanced breeding values (GEBV) when using genotypes imputed from a 3,000-marker single nucleotide polymorphism (SNP) panel to a 50,000-marker SNP panel. Data co...

  6. Effect of predictor traits on accuracy of genomic breeding values for feed intake based on a limited cow reference population.

    Science.gov (United States)

    Pszczola, M; Veerkamp, R F; de Haas, Y; Wall, E; Strabel, T; Calus, M P L

    2013-11-01

    The genomic breeding value accuracy of scarcely recorded traits is low because of the limited number of phenotypic observations. One solution to increase the breeding value accuracy is to use predictor traits. This study investigated the impact of recording additional phenotypic observations for predictor traits on reference and evaluated animals on the genomic breeding value accuracy for a scarcely recorded trait. The scarcely recorded trait was dry matter intake (DMI, n = 869) and the predictor traits were fat-protein-corrected milk (FPCM, n = 1520) and live weight (LW, n = 1309). All phenotyped animals were genotyped and originated from research farms in Ireland, the United Kingdom and the Netherlands. Multi-trait REML was used to simultaneously estimate variance components and breeding values for DMI using available predictors. In addition, analyses using only pedigree relationships were performed. Breeding value accuracy was assessed through cross-validation (CV) and prediction error variance (PEV). CV groups (n = 7) were defined by splitting animals across genetic lines and management groups within country. With no additional traits recorded for the evaluated animals, both CV- and PEV-based accuracies for DMI were substantially higher for genomic than for pedigree analyses (CV: max. 0.26 for pedigree and 0.33 for genomic analyses; PEV: max. 0.45 and 0.52, respectively). With additional traits available, the differences between pedigree and genomic accuracies diminished. With additional recording for FPCM, pedigree accuracies increased from 0.26 to 0.47 for CV and from 0.45 to 0.48 for PEV. Genomic accuracies increased from 0.33 to 0.50 for CV and from 0.52 to 0.53 for PEV. With additional recording for LW instead of FPCM, pedigree accuracies increased to 0.54 for CV and to 0.61 for PEV. Genomic accuracies increased to 0.57 for CV and to 0.60 for PEV. With both FPCM and LW available for evaluated animals, accuracy was highest (0.62 for CV and 0.61 for PEV in

  7. Prediction of breeding values for tenderness of market animals from measurements on bulls.

    Science.gov (United States)

    Barkhouse, K L; Van Vleck, L D; Cundiff, L V; Koohmaraie, M; Lunstra, D D; Crouse, J D

    1996-11-01

    Data were tenderness measures on steaks from 237 bulls (Group II) slaughtered after producing freezable semen and on 1,431 related steers and heifers (market animals, Group I) from Angus, Hereford, Pinzgauer, Brahman, and Sahiwal crosses from the Germ Plasm Evaluation project at the U.S. Meat Animal Research Center. Tenderness was assessed through Warner-Bratzler Shear Force (SF), taste panel tenderness (TPT), marbling score (MS), and myofibrillar fragmentation index (MFI). For all traits, as fraction Bos indicus inheritance increased, implied tenderness decreased. Heritability estimates were generally not significantly different from zero. Genetic correlations generally indicated favorable associations among the traits. The range in predicted breeding values of bulls for market animal tenderness was small and from -.34 to .32 kg for market animal shear force. Because of low estimates of heritability for SF or TPT, results from this experiment indicate that selection based on tenderness of steaks sampled from intact or late castrate males slaughtered following collection of freezable quality semen would not be very effective in improving average tenderness of steaks from steers of heifer progeny. If a mean of heritability estimates reported in the literature of .27 for shear value was assumed for market steer and heifer progeny instead of .02 as found in the present study, then selection based on estimates of shear force in young bulls would be relatively more effective in improving shear force of market progeny. PMID:8923175

  8. The effect of missing marker genotypes on the accuracy of gene-assisted breeding value estimation: a comparison of methods

    NARCIS (Netherlands)

    Mulder, H.A.; Meuwissen, T.H.E.; Calus, M.P.L.; Veerkamp, R.F.

    2010-01-01

    In livestock populations, missing genotypes on a large proportion of the animals is a major problem when implementing geneassisted breeding value estimation for genes with known effect. The objective of this study was to compare different methods to deal with missing genotypes on accuracy of gene-as

  9. Reference values in blood elements in crioula breed horses by nuclear methodology

    International Nuclear Information System (INIS)

    In this study the reference value for Br (0,0008 - 0,0056 gL-1), Ca (0,089 - 0,369 gL-1), Cl (2,10 - 3,26 gL-1), Fe (0,381 - 0,689 gL-1), I (0,00018 - 0,00266 gL-1), K (1,14 - 2,74 gL-1), Mg (0,030 - 0,074 gL-1), Na (1,36 - 2,80 gL-1), P (-1), S (0,99 - 2,79 gL-1) and Zn (0,0012 - 0,0048 gL-1) as well as the correlation matrix in blood of Crioulo breed horses were determined using nuclear methodology (Neutron Activation Analysis Technique). These data allowed to identifying physiological alterations related to the sex and regime of exercise (hyperimmune sera production at Butantan Institute, Sao Paulo, Brasil). To perform these analyses was used 20 adult horses (8 males and 12 females), with average mass 350 kg, without clinical signs of disease, 1-3 years old, kept on pasture in Sao Joaquim Farm at Butantan Institute (Sao Paulo city). Other group just immunized, composed by 6 equines males (same age and weight), were also analyzed. These data are an important support to understand the physiological functions of these elements in blood during the process of sera production. (author)

  10. The value of resequence data for poultry breeding: a primary layer breeder perspective.

    Science.gov (United States)

    Fulton, Janet E

    2014-02-01

    Poultry breeding companies are facing a new paradigm. Since 2004, extensive resources have been developed to increase understanding of the fundamental biology of the chicken. The chicken genome has been sequenced and revised twice, millions of novel DNA variants have been identified, and new tools have been created that allow rapid and inexpensive detection of these DNA variations. These developments have led to the establishment of molecular-based breeding programs within major poultry breeding companies that are revolutionizing the primary poultry breeding industries. Costs of sequencing continue to drop and are predicted to eventually reach the point where it is feasible to sequence the entire genome of elite birds before selection. There are multiple challenges to be resolved before this information can be fully incorporated into a breeding program. These include handling and analyzing the extremely large data sets generated, understanding which genes, variants, or both are relevant for commercial production traits, development of new bio-informatic tools, and integration of molecular information with traditional breeding programs. The novel variation identified within elite commercial lines will lead to enhancements in commercial breeding programs. Applications of this information include whole genomic selection, parentage identification, trait association studies, and quality control.

  11. Estimated breeding values and genetic trend for milk yield in Nili Ravi buffaloes

    OpenAIRE

    Ahmad, M.(National Centre for Physics, Quaid-I-Azam University, Islamabad, Pakistan)

    2010-01-01

    Data on 263 pedigrees, breeding and performance records of 98 Nili-Ravi Buffaloes maintained at Livestock Experiment Station, Bahadurnagar, Okara, Punjab, Pakistan during the period 1991 to 2002 were utilized in this study to identify the high yielding elite buffaloes/bull mothers (dams) to retain for further breeding for the on going progeny testing program in the country. The lactation records up to 6th parity were used for the analysis. The data were analyzed through Best Linear Unbiased P...

  12. Estimation of Genetic Parameters and Breeding Values of Milk Traits for Simmental Cattle in Croatia Using a Lactation Animal Model

    Directory of Open Access Journals (Sweden)

    Miroslav Kapš

    2004-12-01

    Full Text Available The objective of this study was to estimate genetic parameters and to predict breeding values for dairy traits in Simmental cattle in Croatia by developing an animal lactation model. Data consisted of 30761 first lactation records of cows born between 1985 and 2001. By including the pedigree there was a total of 48748 animals. The following effects were analyzed: age, season and year at first calving, days open, breeding organization, farm, animal, and genetic group. Adequacy of the models was tested by using F tests for fixed effects, and REML functions and ‘Mendelian sampling’ for the whole models. The best fit model was determined to have the following effects: age at first calving, days open, year x season interaction and breeding organization x year interaction as fixed, and animal and farm x year as random effects. By including genetic group the model was further improved. From this model, the following heritabilites were estimated: 0.34 ± 0.02, 0.30 ± 0.02, 0.29 ± 0.03 for milk, milk fat and protein yield, respectively. Further, phenotypic and genetic trends were analyzed. The genetic gain in milk traits has been low so far, but by using an appropriate animal model, the breeding value prediction is expected to be improved in terms of accuracy and precision.

  13. The effect of missing marker genotypes on the accuracy of gene-assisted breeding value estimation: a comparison of methods.

    Science.gov (United States)

    Mulder, H A; Meuwissen, T H E; Calus, M P L; Veerkamp, R F

    2010-01-01

    In livestock populations, missing genotypes on a large proportion of the animals is a major problem when implementing gene-assisted breeding value estimation for genes with known effect. The objective of this study was to compare different methods to deal with missing genotypes on accuracy of gene-assisted breeding value estimation for identified bi-allelic genes using Monte Carlo simulation. A nested full-sib half-sib structure was simulated with a mixed inheritance model with one bi-allelic quantitative trait loci (QTL) and a polygenic effect due to infinite number of polygenes. The effect of the QTL was included in gene-assisted BLUP either by random regression on predicted gene content, i.e. the number of positive alleles, or including haplotype effects in the model with an inverse IBD matrix to account for identity-by-descent relationships between haplotypes using linkage analysis information (IBD-LA). The inverse IBD matrix was constructed using segregation indicator probabilities obtained from multiple marker iterative peeling. Gene contents for unknown genotypes were predicted using either multiple marker iterative peeling or mixed model methodology. For both methods, gene-assisted breeding value estimation increased accuracies of total estimated breeding value (EBV) with 0% to 22% for genotyped animals in comparison to conventional breeding value estimation. For animals that were not genotyped, the increase in accuracy was much lower (0% to 5%), but still substantial when the heritability was 0.1 and when the QTL explained at least 15% of the genetic variance. Regression on predicted gene content yielded higher accuracies than IBD-LA. Allele substitution effects were, however, overestimated, especially when only sires and males in the last generation were genotyped. For juveniles without phenotypic records and traits measured only on females, the superiority of regression on gene content over IBD-LA was larger than when all animals had phenotypes. Missing

  14. Analysis of genetic and cultural conservation value of three indigenous Croatian cattle breeds in a local and global context.

    Science.gov (United States)

    Ramljak, J; Ivanković, A; Veit-Kensch, C E; Förster, M; Medugorac, I

    2011-02-01

    It is widely accepted that autochthonous cattle breeds can be important genetic resources for unforeseeable environmental conditions in the future. Apart from that, they often represent local culture and tradition and thus assist in the awareness of ethnic identity of a country. In Croatia, there are only three indigenous cattle breeds, Croatian Buša, Slavonian Syrmian Podolian and Istrian Cattle. All of them are threatened but specialized in a particular habitat and production system. We analysed 93 microsatellites in 51 animals of each breed to get thorough information about genetic diversity and population structure. We further set them within an existing frame of additional 16 breeds that have been genotyped for the same marker set and cover a geographical area from the domestication centre near Anatolia, through the Balkan and alpine regions, to the north-west of Europe. The cultural value was evaluated regarding the role in landscape, gastronomy, folklore and handicraft. The overall results recognize Croatian Buša being partly admixed but harbouring an enormous genetic diversity comparable with other traditional unselected Buša breeds in the Anatolian and Balkan areas. The Podolian cattle showed the lowest genetic diversity at the highest genetic distance to all remaining breeds but are playing an important role as part of the cultural landscape and thus contribute to the tourist industry. The genetic diversity of the Istrian cattle was found in the middle range of this study. It is already included in the tourist industry as a local food speciality. Current and future conservation strategies are discussed.

  15. Analysis of genetic and cultural conservation value of three indigenous Croatian cattle breeds in a local and global context.

    Science.gov (United States)

    Ramljak, J; Ivanković, A; Veit-Kensch, C E; Förster, M; Medugorac, I

    2011-02-01

    It is widely accepted that autochthonous cattle breeds can be important genetic resources for unforeseeable environmental conditions in the future. Apart from that, they often represent local culture and tradition and thus assist in the awareness of ethnic identity of a country. In Croatia, there are only three indigenous cattle breeds, Croatian Buša, Slavonian Syrmian Podolian and Istrian Cattle. All of them are threatened but specialized in a particular habitat and production system. We analysed 93 microsatellites in 51 animals of each breed to get thorough information about genetic diversity and population structure. We further set them within an existing frame of additional 16 breeds that have been genotyped for the same marker set and cover a geographical area from the domestication centre near Anatolia, through the Balkan and alpine regions, to the north-west of Europe. The cultural value was evaluated regarding the role in landscape, gastronomy, folklore and handicraft. The overall results recognize Croatian Buša being partly admixed but harbouring an enormous genetic diversity comparable with other traditional unselected Buša breeds in the Anatolian and Balkan areas. The Podolian cattle showed the lowest genetic diversity at the highest genetic distance to all remaining breeds but are playing an important role as part of the cultural landscape and thus contribute to the tourist industry. The genetic diversity of the Istrian cattle was found in the middle range of this study. It is already included in the tourist industry as a local food speciality. Current and future conservation strategies are discussed. PMID:21214647

  16. Varying pasture growth and commodity prices change the value of traits in sheep breeding objectives

    NARCIS (Netherlands)

    Rose, I.J.; Mulder, H.A.; Thompson, P.N.; Werf, van der J.H.J.; Arendonk, van J.A.M.

    2014-01-01

    Breeding programs for livestock require economic weights for traits that reflect the most profitable animal in a given production system. Economic weights are commonly based on average conditions. In pasture based livestock production systems the cost of feed is an important profit driver, but avail

  17. Estimation of heritability and breeding values for early egg production in laying hens from pooled data

    NARCIS (Netherlands)

    Biscarini, F.; Bovenhuis, H.; Ellen, E.D.; Addo, S.; Arendonk, van J.A.M.

    2010-01-01

    Under commercial conditions, data on egg production in laying hens are usually collected per cage rather than individually. In current breeding programs, genetic evaluations are, however, based on individually recorded egg production. Because commercial flocks are not maintained in single cages, thi

  18. Validation of simultaneous deregression of cow and bull breeding values and derivation of appropriate weights.

    Science.gov (United States)

    Calus, M P L; Vandenplas, J; Ten Napel, J; Veerkamp, R F

    2016-08-01

    Training of genomic prediction in dairy cattle may use deregressed proofs (DRP) as phenotypes. In this case, DRP should be estimated breeding values (EBV) corrected for information of relatives included in the data used for genomic prediction, and adjusted for regression to the mean (i.e., their reliability). Deregression is especially important when combining animals with EBV with low reliability, as commonly the case for cows, and high reliability. The objective of this paper, therefore, was to compare the performance of different deregression procedures for data that include both cow and bull EBV, and to develop and test procedures to obtain the appropriate deregressed weights for the DRP. Considered DRP were EBV: without any adjustment, adjusted for information of parents and regression to the mean, or adjusted for information of all relatives and regression to the mean. Considered deregressed weights were weights of initial EBV: without any adjustment, adjusted for information of parents, or adjusted for information of all relatives. The procedures were compared using simulated data based on an existing pedigree with 1,532 bulls and 13,720 cows that were considered to be included in the data used for genomic prediction. For each cow, 1 to 5 records were simulated. For each bull, an additional 50 to 200 daughters with 1 record each were simulated to generate a source of data that was not used for genomic prediction. The simulated trait had either a heritability of 0.05 or 0.3. The validation involved 3 steps: (1) computation of initial EBV and weights, (2) deregression of those EBV and weights, (3) using deregressed EBV and weights to compute final EBV, (4) comparison of the initial and final EBV and weights. The methods developed to compute appropriate weights for the DRP were either very precise and computationally somewhat demanding for larger data sets, or were less precise but computationally trivial due their approximate nature. Adjusting DRP for all

  19. The use of principal component analysis for predicting genomic breeding values

    OpenAIRE

    Dadoudis, Christos

    2012-01-01

    During the last few years the idea of predicting quantitative traits and diseases based on genotypic information has raised a major interest in animal and plant breeding as well as in human genetics. However, there are still important questions and problems that need to be addressed. Some of these problems are statistical. Statistical problems mainly concern multicollinearity basic derived from the huge amount of available data. In addition, the number of variables that needs to be estimated ...

  20. Comparison of breeding value prediction for two traits in a Nellore-Angus crossbred population using different Bayesian modeling methodologies

    Directory of Open Access Journals (Sweden)

    Lauren L. Hulsman Hanna

    2014-12-01

    Full Text Available The objectives of this study were to 1 compare four models for breeding value prediction using genomic or pedigree information and 2 evaluate the impact of fixed effects that account for family structure. Comparisons were made in a Nellore-Angus population comprising F2, F3 and half-siblings to embryo transfer F2 calves with records for overall temperament at weaning (TEMP; n = 769 and Warner-Bratzler shear force (WBSF; n = 387. After quality control, there were 34,913 whole genome SNP markers remaining. Bayesian methods employed were BayesB ( π = 0.995 or 0.997 for WBSF or TEMP, respectively and BayesC (π = 0 and π, where π is the ideal proportion of markers not included. Direct genomic values (DGV from single trait Bayesian analyses were compared to conventional pedigree-based animal model breeding values. Numerically, BayesC procedures (using π had the highest accuracy of all models for WBSF and TEMP ( ρgg = 0.843 and 0.923, respectively, but BayesB had the least bias (regression of performance on prediction closest to 1, βy,x = 2.886 and 1.755, respectively. Accounting for family structure decreased accuracy and increased bias in prediction of DGV indicating a detrimental impact when used in these prediction methods that simultaneously fit many markers.

  1. [Allelic polymorphism of kappa-casein gene (CSN3) in Russian cattle breeds and its informative value as a genetic marker].

    Science.gov (United States)

    Sulimova, G E; Abani Azari, M; Rostamzadeh, J; Mohammad Abani, M R; Lazebnyĭ, O E

    2007-01-01

    The frequencies of the kappa-casein gene (CSN3) alleles and genotypes have been determined in five Russian cattle breeds (Bestuzhev, Kalmyk, Russian Black Pied, Yaroslavl, and Yakut breeds) by means of PCR-RFLP analysis using two independent restriction nucleases (HinfI and TaqI) and by allele-specific PCR. Typing alleles A and B of CSN3 is of practical importance, because allele B is correlated with commercially valuable parameters of milk productivity (protein content and milk yield) and improves the cheese yielding capacity. The frequencies of the B allele of CSN3 in the breeds studied vary from 0.16 to 0.50; and those of the AB and BB genotypes, from 0.27 to 0.60 and from 0.02 to 0.23, respectively. The Yaroslavl breed had the highest frequencies of CSN3 allele B and genotype BB (0.50 and 0.23, respectively). The frequencies of the B allele and BB genotype in other breeds studied varied from 0.25 to 0.32 and from 0.03 to 0.09, respectively. In none of the breeds studied have the observed and expected heterozygosities been found to differ from each other significantly. However, the observed genotype distributions significantly differ from the expected one in some herds (in most such cases, an excess of heterozygotes is observed). Two herds of the Yaroslavl breed dramatically differ from each other in the heterozygosity level: a deficit (D = -0.14) and an excess (D = 0.20) of heterozygotes have been observed at the Mikhailovskoe and Gorshikha farms, respectively. In general, however, the heterozygosity of the Yaroslavl breed corresponds to the expected level (D = 0.04). Analysis of breeds for homogeneity with the use of Kulback's test has shown that all cattle breeds studied are heterogeneous, the CSN3 diversity within breeds being higher than that among different breeds, which is confirmed by low Fst values (0.0025-0.0431). Thus, a DNA marker based on CSN3 gene polymorphism is extremely important for breeding practice as a marker of milk quality; however, it is

  2. Evaluation of some Newly Developed Diploid Hybrids and their Breeding Value in 4x-2x Crosses

    Institute of Scientific and Technical Information of China (English)

    2002-01-01

    The narrow genetic base in potato (Solanum tuberosum L. ) limits the progress in cultivar development.The rich diploid germplasm in the origin center of potato provide a unique resource for improvement of tetraploid potatoes. Seven newly developed diploid hybrids with 2n pollen production, all of which have S.phureja background,were developed and evaluated for their value in potato breeding. They were crossed as male parnets to six tetraploid Solanum tuberosum cultivars,and seeds in large quantity from eleven crosses were obtained. Main agronomic traits ,such as tuber yield ,tuber number,mean tuber weight ,tuber shape ,eye depth, skin smoothness, flesh color, and specific gravity, were measured for 4x-2x tetraploid progenies in seedling generation ,and their parents as well. All of the diploid hybrids had some merit for specific traits and the DH39 was more promising ;high specific gravity trait in some diploid hybrids was successfully introgressed into tetroploid progenies via 4x-2x crosses. These diploid hybrids have potential value in potato breeding.

  3. Estimated breeding values for canine hip dysplasia radiographic traits in a cohort of Australian German Shepherd dogs.

    Directory of Open Access Journals (Sweden)

    Bethany J Wilson

    Full Text Available Canine hip dysplasia (CHD is a serious and common musculoskeletal disease of pedigree dogs and therefore represents both an important welfare concern and an imperative breeding priority. The typical heritability estimates for radiographic CHD traits suggest that the accuracy of breeding dog selection could be substantially improved by the use of estimated breeding values (EBVs in place of selection based on phenotypes of individuals. The British Veterinary Association/Kennel Club scoring method is a complex measure composed of nine bilateral ordinal traits, intended to evaluate both early and late dysplastic changes. However, the ordinal nature of the traits may represent a technical challenge for calculation of EBVs using linear methods. The purpose of the current study was to calculate EBVs of British Veterinary Association/Kennel Club traits in the Australian population of German Shepherd Dogs, using linear (both as individual traits and a summed phenotype, binary and ordinal methods to determine the optimal method for EBV calculation. Ordinal EBVs correlated well with linear EBVs (r = 0.90-0.99 and somewhat well with EBVs for the sum of the individual traits (r = 0.58-0.92. Correlation of ordinal and binary EBVs varied widely (r = 0.24-0.99 depending on the trait and cut-point considered. The ordinal EBVs have increased accuracy (0.48-0.69 of selection compared with accuracies from individual phenotype-based selection (0.40-0.52. Despite the high correlations between linear and ordinal EBVs, the underlying relationship between EBVs calculated by the two methods was not always linear, leading us to suggest that ordinal models should be used wherever possible. As the population of German Shepherd Dogs which was studied was purportedly under selection for the traits studied, we examined the EBVs for evidence of a genetic trend in these traits and found substantial genetic improvement over time. This study suggests the use of ordinal EBVs could

  4. Genetic (co)variances and breeding value estimation of Gompertz growth curve parameters in Finnish Yorkshire boars, gilts and barrows.

    Science.gov (United States)

    Koivula, M; Sevón-Aimonen, M-L; Strandén, I; Matilainen, K; Serenius, T; Stalder, K J; Mäntysaari, E A

    2008-06-01

    This paper's objectives were to estimate the genetic (co)variance components of the Gompertz growth curve parameters and to evaluate the relationship of estimated breeding values (EBV) based on average daily gain (ADG) and Gompertz growth curves. Finnish Yorkshire central test station performance data was obtained from the Faba Breeding (Vantaa, Finland). The final data set included 121,488 weight records from 10,111 pigs. Heritability estimates for the Gompertz growth parameters mature weight (alpha), logarithm of mature weight to birth weight ratio (beta) and maturation rate (kappa) were 0.44, 0.55 and 0.31, respectively. Genotypic and phenotypic correlations between the growth curve parameters were high and mainly negative. The only positive relationship was found between alpha and beta. Pearson and Spearman rank correlation coefficients between EBV for ADG and daily gain calculated from Gompertz growth curves were 0.79. The Spearman rank correlation between the sire EBV for ADG and Gompertz growth curve parameter-based ADG for all sires with at least 15 progeny was 0.86. Growth curves differ significantly between individuals and this information could be utilized for selection purposes when improving growth rate in pigs.

  5. Accuracy of genomic prediction using deregressed breeding values estimated from purebred and crossbred offspring phenotypes in pigs.

    Science.gov (United States)

    Hidalgo, A M; Bastiaansen, J W M; Lopes, M S; Veroneze, R; Groenen, M A M; de Koning, D-J

    2015-07-01

    Genomic selection is applied to dairy cattle breeding to improve the genetic progress of purebred (PB) animals, whereas in pigs and poultry the target is a crossbred (CB) animal for which a different strategy appears to be needed. The source of information used to estimate the breeding values, i.e., using phenotypes of CB or PB animals, may affect the accuracy of prediction. The objective of our study was to assess the direct genomic value (DGV) accuracy of CB and PB pigs using different sources of phenotypic information. Data used were from 3 populations: 2,078 Dutch Landrace-based, 2,301 Large White-based, and 497 crossbreds from an F1 cross between the 2 lines. Two female reproduction traits were analyzed: gestation length (GLE) and total number of piglets born (TNB). Phenotypes used in the analyses originated from offspring of genotyped individuals. Phenotypes collected on CB and PB animals were analyzed as separate traits using a single-trait model. Breeding values were estimated separately for each trait in a pedigree BLUP analysis and subsequently deregressed. Deregressed EBV for each trait originating from different sources (CB or PB offspring) were used to study the accuracy of genomic prediction. Accuracy of prediction was computed as the correlation between DGV and the DEBV of the validation population. Accuracy of prediction within PB populations ranged from 0.43 to 0.62 across GLE and TNB. Accuracies to predict genetic merit of CB animals with one PB population in the training set ranged from 0.12 to 0.28, with the exception of using the CB offspring phenotype of the Dutch Landrace that resulted in an accuracy estimate around 0 for both traits. Accuracies to predict genetic merit of CB animals with both parental PB populations in the training set ranged from 0.17 to 0.30. We conclude that prediction within population and trait had good predictive ability regardless of the trait being the PB or CB performance, whereas using PB population(s) to predict

  6. Mutant breeding of ornamental trees for creating variations with high value using Proton Beam

    Energy Technology Data Exchange (ETDEWEB)

    Kwon, H. J.; Lim, J. H.; Woo, S. M.; Hwang, M. J.; Pyo, S. H.; Woo, J. S. [Phygen Co., Daejeon (Korea, Republic of)

    2009-04-15

    It is necessary to induce the improved strains of ornamental plants with more disease-resistant and useful for landscape or phytoremediation. Mutation breeding has played an important role in crop improvement, and more than 2,000 mutant cultivars have been released. For the induction of mutation, gamma rays and X-rays are widely used as a mutagen. Proton beam had higher energy than -ray and worked with localized strength, so that proton-beam radiation could be valuable tool to induce useful strains of ornamental plants. Proton ion beam irradiation was used to induce a useful mutant in rice, chrysanthemum, carnation, and so on in Japan. Also, proton ion beam was used to select a useful host strain, in polyhydroxybutyrate (PHB), a member of biodegradable plastic, could be overproduced in Korea. Therefore, we surmise that the effects of proton beam is different from those of gamma rays and X-rays, and we expect proton beam to be a new mutagen. This research was conducted to investigate the proton-beam radiation sensitivity and seed germination rate of the various ornamental plants like as Albizia julibrissin, Ficus religiosa, Rhus chinensis, Sorbaria sorbilfolia and Spiraea chinensis, to survey the quantitative characteristics of proton beam induced strains. To induce the variants of ornamental plants, seeds were irradiated at the dose of 0{approx}2kGy of proton beam at room temperature. Proton beam energy level was 45 MeV and was irradiated at dose of 0{approx}2kGy by MC-50 Cyclotron. After irradiation, to assess the effects of proton beam on radiation sensitivity and morphological changes of the plants and the seed germination rate were analysed. By the proton beam radiation, the germination rate decreased at the higher dose. The other hand, the germination rate of Rhus chinensis increased the dose higher, so that it need to investigate the germination rate over 2kGy radiation. The effects of mutation induction by proton beam irradiation on seeds in Lagerstroemia

  7. Mutant breeding of ornamental trees for creating variations with high value using Proton Beam

    International Nuclear Information System (INIS)

    It is necessary to induce the improved strains of ornamental plants with more disease-resistant and useful for landscape or phytoremediation. Mutation breeding has played an important role in crop improvement, and more than 2,000 mutant cultivars have been released. For the induction of mutation, gamma rays and X-rays are widely used as a mutagen. Proton beam had higher energy than -ray and worked with localized strength, so that proton-beam radiation could be valuable tool to induce useful strains of ornamental plants. Proton ion beam irradiation was used to induce a useful mutant in rice, chrysanthemum, carnation, and so on in Japan. Also, proton ion beam was used to select a useful host strain, in polyhydroxybutyrate (PHB), a member of biodegradable plastic, could be overproduced in Korea. Therefore, we surmise that the effects of proton beam is different from those of gamma rays and X-rays, and we expect proton beam to be a new mutagen. This research was conducted to investigate the proton-beam radiation sensitivity and seed germination rate of the various ornamental plants like as Albizia julibrissin, Ficus religiosa, Rhus chinensis, Sorbaria sorbilfolia and Spiraea chinensis, to survey the quantitative characteristics of proton beam induced strains. To induce the variants of ornamental plants, seeds were irradiated at the dose of 0∼2kGy of proton beam at room temperature. Proton beam energy level was 45 MeV and was irradiated at dose of 0∼2kGy by MC-50 Cyclotron. After irradiation, to assess the effects of proton beam on radiation sensitivity and morphological changes of the plants and the seed germination rate were analysed. By the proton beam radiation, the germination rate decreased at the higher dose. The other hand, the germination rate of Rhus chinensis increased the dose higher, so that it need to investigate the germination rate over 2kGy radiation. The effects of mutation induction by proton beam irradiation on seeds in Lagerstroemia indica were

  8. Changing values of farm animal genomic resources. from historical breeds to the Nagoya Protocol.

    Science.gov (United States)

    Tamminen, Sakari

    2015-01-01

    The paper reviews the history of Animal genetic resources (AnGRs) and claims that over the course of history they have been conceptually transformed from economic, ecologic and scientific life forms into political objects, reflecting in the way in which any valuation of AnGRs is today inherently imbued with national politics and its values enacted by legally binding global conventions. Historically, the first calls to conservation were based on the economic, ecological and scientific values of the AnGR. While the historical arguments are valid and still commonly proposed values for conservation, the AnGR have become highly politicized since the adoption of the Convention of Biological Diversity (CBD), the subsequent Interlaken Declaration, the Global Plan for Action (GPA) and the Nagoya Protocol. The scientific and political definitions of the AnGRs were creatively reshuffled within these documents and the key criteria by which they are now identified and valued today were essentially redefined. The criteria of "in situ condition" has become the necessary starting point for all valuation efforts of AnGRs, effectively transforming their previous nature as natural property and global genetic commons into objects of national concern pertaining to territorially discrete national genetic landscapes, regulated by the sovereign powers of the parties to the global conventions. PMID:26442098

  9. Changing values of Farm Animal Genomic Resources. From historical breeds to the Nagoya Protocol.

    Directory of Open Access Journals (Sweden)

    Sakari eTamminen

    2015-09-01

    Full Text Available The paper reviews the history of AnGRs and claims that over the course of history they have been conceptually transformed from economic, ecologic and scientific life forms into political objects, reflecting in the way in which any valuation of AnGRs is today inherently imbued with national politics and its values enacted by legally binding global conventions. Historically, the first calls to conservation were based on the economic, ecological and scientific values of the AnGR. While the historical arguments are valid and still commonly proposed values for conservation, the AnGR have become highly politicized since the adoption of the Convention of Biological Diversity (CBD, the subsequent Interlaken Declaration, the Global Plan for Action (GPA and the Nagoya Protocol. The scientific and political definitions of the AnGRs were creatively reshuffled within these documents and the key criteria by which they are now identified and valued today were essentially redefined. The criteria of in-situ condition has become the necessary starting point for all valuation efforts of AnGRs, effectively transforming their previous nature as natural property and global genetic club commons into objects of national concern pertaining to territorially discrete national genetic landscapes, regulated by the sovereign powers of the parties to the global conventions.

  10. Estimation of accuracies and expected genetic change from selection for selection indexes that use multiple-trait predictions of breeding values.

    Science.gov (United States)

    Barwick, S A; Tier, B; Swan, A A; Henzell, A L

    2013-10-01

    Procedures are described for estimating selection index accuracies for individual animals and expected genetic change from selection for the general case where indexes of EBVs predict an aggregate breeding objective of traits that may or may not have been measured. Index accuracies for the breeding objective are shown to take an important general form, being able to be expressed as the product of the accuracy of the index function of true breeding values and the accuracy with which that function predicts the breeding objective. When the accuracies of the individual EBVs of the index are known, prediction error variances (PEVs) and covariances (PECs) for the EBVs within animal are able to be well approximated, and index accuracies and expected genetic change from selection estimated with high accuracy. The procedures are suited to routine use in estimating index accuracies in genetic evaluation, and for providing important information, without additional modelling, on the directions in which a population will move under selection.

  11. Effects of the number of markers per haplotype and clustering of haplotypes on the accuracy of QTL mapping and prediction of genomic breeding values

    NARCIS (Netherlands)

    Calus, M.P.L.; Meuwissen, T.H.E.; Windig, J.J.; Knol, E.F.; Schrooten, C.; Vereijken, A.L.J.; Veerkamp, R.F.

    2009-01-01

    The aim of this paper was to compare the effect of haplotype definition on the precision of QTL-mapping and on the accuracy of predicted genomic breeding values. In a multiple QTL model using identity-by-descent (IBD) probabilities between haplotypes, various haplotype definitions were tested i.e. i

  12. Predictive ability of genomic selection models for breeding value estimation on growth traits of Pacific white shrimp Litopenaeus vannamei

    Science.gov (United States)

    Wang, Quanchao; Yu, Yang; Li, Fuhua; Zhang, Xiaojun; Xiang, Jianhai

    2016-10-01

    Genomic selection (GS) can be used to accelerate genetic improvement by shortening the selection interval. The successful application of GS depends largely on the accuracy of the prediction of genomic estimated breeding value (GEBV). This study is a first attempt to understand the practicality of GS in Litopenaeus vannamei and aims to evaluate models for GS on growth traits. The performance of GS models in L. vannamei was evaluated in a population consisting of 205 individuals, which were genotyped for 6 359 single nucleotide polymorphism (SNP) markers by specific length amplified fragment sequencing (SLAF-seq) and phenotyped for body length and body weight. Three GS models (RR-BLUP, BayesA, and Bayesian LASSO) were used to obtain the GEBV, and their predictive ability was assessed by the reliability of the GEBV and the bias of the predicted phenotypes. The mean reliability of the GEBVs for body length and body weight predicted by the different models was 0.296 and 0.411, respectively. For each trait, the performances of the three models were very similar to each other with respect to predictability. The regression coefficients estimated by the three models were close to one, suggesting near to zero bias for the predictions. Therefore, when GS was applied in a L. vannamei population for the studied scenarios, all three models appeared practicable. Further analyses suggested that improved estimation of the genomic prediction could be realized by increasing the size of the training population as well as the density of SNPs.

  13. Estimation of economic values in three breeding perspectives for longevity and milk production traits in Holstein dairy cattle in Iran

    Directory of Open Access Journals (Sweden)

    Abdolahad Shadparvar

    2010-01-01

    Full Text Available The objectives of this study were to estimate economic values (EVs for three production traits (milk, fat and protein yields and longevity and to develop a national selection index. The proposed Iranian selection index was compared with selection indices of three other countries in the world. A simple and appropriate model was used to describe the Holstein dairy cattle industry under an Iranian production system. Production parameters and economic data were collected from two Holstein dairy farms in Tehran province. The EVs were estimated at farm level for three breeding perspectives (maximized profit, minimized costs, and economic efficiency and two restrictions in production system (fixed herd size and fixed total input. The average absolute EVs on profit perspective and herd size restriction for milk, fat, and protein yields (based on $/kg and longevity ($/month were 0.11, 0.89, -0.20, and 6.20, respectively. The average absolute EVs under minimized costs per unit of product interest for milk, fat, protein yields and longevity were -0.30, -3.43, 0.88 and -20.40, respectively. The average absolute EVs under maximized economic efficiency for milk, fat and protein yields and longevity were 0.34, 2.73, -0.99 and 36.33, respectively. Relative emphasis for three production traits and longevity were 59.7, 14.3, -3.0 and 23.1, respectively. The comparison of the proposed Iranian index with those countries where most of the semen and embryos are imported points out that developing a national selection index to improve cow profitability and optimum generic trends is necessary. Sensitivity analysis indicated that the influence of milk payment changes on EVs was the greatest as its influence on fat and protein EVs is substantial. EVs for milk and fat yields, with respect to price changes (milk, feed and non-feed, were the least sensitive and most sensitive, respectively.

  14. Genetic diversity, population structure and subdivision of local Balkan pig breeds in Austria, Croatia, Serbia and Bosnia-Herzegovina and its practical value in conservation programs

    Directory of Open Access Journals (Sweden)

    Druml Thomas

    2012-03-01

    Full Text Available Abstract Background At present the Croatian Turopolje pig population comprises about 157 breeding animals. In Austria, 324 Turopolje pigs originating from six Croatian founder animals are registered. Multiple bottlenecks have occurred in this population, one major one rather recently and several more older and moderate ones. In addition, it has been subdivided into three subpopulations, one in Austria and two in Croatia, with restricted gene flow. These specificities explain the delicate situation of this endangered Croatian lard-type pig breed. Methods In order to identify candidate breeding animals or gene pools for future conservation breeding programs, we studied the genetic diversity and population structure of this breed using microsatellite data from 197 individuals belonging to five different breeds. Results The genetic diversity of the Turopolje pig is dramatically low with observed heterozygosities values ranging from 0.38 to 0.57. Split into three populations since 1994, two genetic clusters could be identified: one highly conserved Croatian gene pool in Turopoljski Lug and the"Posavina" gene pool mainly present in the Austrian population. The second Croatian subpopulation in Lonjsko Polje in the Posavina region shows a constant gene flow from the Turopoljski Lug animals. Conclusions One practical conclusion is that it is necessary to develop a "Posavina" boar line to preserve the "Posavina" gene pool and constitute a corresponding population in Croatia. Animals of the highly inbred herd in Turopoljski Lug should not be crossed with animals of other populations since they represent a specific phenotype-genotype combination. However to increase the genetic diversity of this herd, a program to optimize its sex ratio should be carried out, as was done in the Austrian population where the level of heterozygosity has remained moderate despite its heavy bottleneck in 1994.

  15. Effects of the number of markers per haplotype and clustering of haplotypes on the accuracy of QTL mapping and prediction of genomic breeding values.

    Science.gov (United States)

    Calus, Mario P L; Meuwissen, Theo H E; Windig, Jack J; Knol, Egbert F; Schrooten, Chris; Vereijken, Addie L J; Veerkamp, Roel F

    2009-01-15

    The aim of this paper was to compare the effect of haplotype definition on the precision of QTL-mapping and on the accuracy of predicted genomic breeding values. In a multiple QTL model using identity-by-descent (IBD) probabilities between haplotypes, various haplotype definitions were tested i.e. including 2, 6, 12 or 20 marker alleles and clustering base haplotypes related with an IBD probability of > 0.55, 0.75 or 0.95. Simulated data contained 1100 animals with known genotypes and phenotypes and 1000 animals with known genotypes and unknown phenotypes. Genomes comprising 3 Morgan were simulated and contained 74 polymorphic QTL and 383 polymorphic SNP markers with an average r2 value of 0.14 between adjacent markers. The total number of haplotypes decreased up to 50% when the window size was increased from two to 20 markers and decreased by at least 50% when haplotypes related with an IBD probability of > 0.55 instead of > 0.95 were clustered. An intermediate window size led to more precise QTL mapping. Window size and clustering had a limited effect on the accuracy of predicted total breeding values, ranging from 0.79 to 0.81. Our conclusion is that different optimal window sizes should be used in QTL-mapping versus genome-wide breeding value prediction.

  16. Effects of the number of markers per haplotype and clustering of haplotypes on the accuracy of QTL mapping and prediction of genomic breeding values

    Directory of Open Access Journals (Sweden)

    Schrooten Chris

    2009-01-01

    Full Text Available Abstract The aim of this paper was to compare the effect of haplotype definition on the precision of QTL-mapping and on the accuracy of predicted genomic breeding values. In a multiple QTL model using identity-by-descent (IBD probabilities between haplotypes, various haplotype definitions were tested i.e. including 2, 6, 12 or 20 marker alleles and clustering base haplotypes related with an IBD probability of > 0.55, 0.75 or 0.95. Simulated data contained 1100 animals with known genotypes and phenotypes and 1000 animals with known genotypes and unknown phenotypes. Genomes comprising 3 Morgan were simulated and contained 74 polymorphic QTL and 383 polymorphic SNP markers with an average r2 value of 0.14 between adjacent markers. The total number of haplotypes decreased up to 50% when the window size was increased from two to 20 markers and decreased by at least 50% when haplotypes related with an IBD probability of > 0.55 instead of > 0.95 were clustered. An intermediate window size led to more precise QTL mapping. Window size and clustering had a limited effect on the accuracy of predicted total breeding values, ranging from 0.79 to 0.81. Our conclusion is that different optimal window sizes should be used in QTL-mapping versus genome-wide breeding value prediction.

  17. Economic values for traits in breeding objectives for sheep in the tropics: impact of tangible and intangible benefits

    NARCIS (Netherlands)

    Kosgey, I.S.; Arendonk, van J.A.M.; Baker, R.L.

    2004-01-01

    In traditional management systems in the tropics, sheep constitute a source of easily convertible capital for financing purposes and insurance, a means of cultural and ceremonial functions, and a source of prestige, meat, manure and skins. In this study, breeding objectives were derived for an indig

  18. Broiler breeding : breeding goals, selection schemes and the usefulness of local breeds for China

    NARCIS (Netherlands)

    Jiang, X.

    1999-01-01

    This dissertation considers three aspects of broiler breeding: definition of breeding goals, selection schemes for specialized lines, and the usefulness of local breeds for China. Economic values in broiler breeding were derived based on a deterministic model. A systematic design for the application

  19. Association of neuropeptide Y and gonadotrophin-releasing hormone receptor gene SNPs with breeding value for growth and egg production traits in Mazandaran native chickens.

    Science.gov (United States)

    Fatemi, S A; Mehrabani-Yeganeh, H; Nejati-Javaremi, A; Niknafs, Sh

    2012-08-16

    Neuropeptide Y (NPY) and gonadotrophin-releasing hormone receptor (GnRHR) are two candidate genes with a wide variety of physiological functions in growth and especially in reproduction processes. We examined the association of one SNP from each of these genes with growth- and egg production-related traits in Mazandaran native chickens. Two hundred and six individuals were genotyped by PCR-RFLP. Marker-trait association analyses were performed using both breeding value and phenotypic information. The data came from 18 successive generations of selection at a Mazandaran native chicken breeding station in Iran. Data were analyzed with a univariate animal model in an ASREML procedure to estimate breeding values of the birds for these traits. Two alleles were found for both genes, A and a alleles for GnRHR, with frequencies of 0.614 and 0.386, B and b alleles for NPY, with frequencies of 0.780 and 0.221, respectively. The additive genetic effects of the GnRHR gene on egg number and egg mass were significant. Also, body weight at sexual maturity was significantly influenced by the NPY gene. We conclude that GnRHR and NPY genes are associated with egg production and growth traits, respectively.

  20. Snapmelon (Cucumis melo L. Momordica group), an indigenous cucurbit from India with immense value for melon breeding

    OpenAIRE

    Dhillon, Narinder P.S.; Singh, H; Pitrat, Michel; Monforte, Antonio J; McCreight, James D.

    2015-01-01

    Snapmelon (Cucumis melo L. Momordica Group; 2n=2x=24) is native to India, where it is widely cultivated and is commonly called ‘phut’, which means to split. Immature fruits are cooked or eaten raw. In this paper we review the wealth of genetic resources in Indian snapmelon landraces for resistance to fungal and viral diseases, nematodes, and insects, and tolerance to drought, soil salinity, and high temperature. Global melon breeding programs have transferred many of these qualities into open...

  1. Genomic breeding value prediction for simple maize hybrid yield using total effects of associated markers, under different imbalance levels and environments.

    Science.gov (United States)

    Cantelmo, N F; Von Pinho, R G; Balestre, M

    2016-01-01

    The main objective of a maize breeding program is to generate hybrid combinations that are more productive than those pre-existing in the market. However, the number of parents, and consequently the number of crosses, increases so rapidly that the phenotypic evaluation of all the possible combinations becomes economically and technically infeasible. In this context, predicting the performance of the most promising genotypes may increase the genetic gains with increased selection intensity and reduced breeding cycles. Thus, the present study aimed to use the total effects of associated markers method to predict genomic breeding values (GBVs) via cross-validation and by using different imbalance levels (10, 30, 50, and 70%). A set of 51 genotyped strains was used with 79 microsatellite markers and 273 hybrids that were generated by a partial diallel. A total of 186 and 272 hybrids were analyzed in the experiments within the southern and central regions of Brazil, respectively. The GBVs were, thus, predicted for each location in both the regions, and for training in one region and validation in another region. The correlation between the predicted and observed GBVs ranged from 0.48 to 0.91, depending on the imbalance level and the region analyzed. Overall, the results obtained in the present study were promising, particularly considering that a small number of markers were used and that the training and predictions occurred in the very distinct regions of southern and central Brazil. PMID:26985952

  2. Genomic dairy cattle breeding

    DEFF Research Database (Denmark)

    Mark, Thomas; Sandøe, Peter

    2010-01-01

    it less accountable to the concern of private farmers for the welfare of their animals. It is argued that there is a need to mobilise a wide range of stakeholders to monitor developments and maintain pressure on breeding companies so that they are aware of the need to take precautionary measures to avoid...... these new genomic tools are especially useful for traits relating to animal welfare that are difficult to improve using traditional breeding tools, they may also facilitate breeding schemes with reduced generation intervals carrying a higher risk of unwanted side-effects on animal welfare. In this paper...... negative effects on animal welfare and to invest in breeding for increased animal welfare. Researchers are encouraged to further investigate the long-term effects of various breeding schemes that rely on genomic breeding values....

  3. Short communication: Genotyping of cows to speed up availability of genomic estimated breeding values for direct health traits in Austrian Fleckvieh (Simmental) cattle--genetic and economic aspects.

    Science.gov (United States)

    Egger-Danner, C; Schwarzenbacher, H; Willam, A

    2014-07-01

    The aim of this study was to quantify the impact of genotyping cows with reliable phenotypes for direct health traits on annual monetary genetic gain (AMGG) and discounted profit. The calculations were based on a deterministic approach using ZPLAN software (University of Hohenheim, Stuttgart, Germany). It was assumed that increases in reliability of the total merit index (TMI) of 5, 15, and 25 percentage points were achieved through genotyping 5,000, 25,000, and 50,000 cows, respectively. Costs for phenotyping, genotyping, and genomic estimated breeding values vary between €150 and €20 per cow. The gain in genotyping cows for traits with medium to high heritability is more than for direct health traits with low heritability. The AMGG is increased by 1.5% if the reliability of TMI is 5 percentage points higher (i.e., 5,000 cows genotyped) and 6.53% higher AMGG can be expected when the reliability of TMI is increased by 25 percentage points (i.e., 50,000 cows genotyped). The discounted profit depends not only on the costs of genotyping but also on the population size. This study indicates that genotyping cows with reliable phenotypes is feasible to speed up the availability of genomic estimated breeding values for direct health traits. But, because of the huge amount of valid phenotypes and genotypes needed to establish an efficient genomic evaluation, it is likely that financial constraints will be the main limiting factor for implementation into breeding program such as Fleckvieh Austria. PMID:24835973

  4. Development of cassava germplasm resources for the improvement of high value root quality traits through induced mutation and marker aided breeding in Nigeria

    International Nuclear Information System (INIS)

    Improvement of cassava for increased beta carotene and protein content, dry matter content and delayed post-harvest physiological deterioration.is important for increased income and improved livelihood for poor farmers. Irradiation was used in this study to induce mutation using in vitro culture plantlets and botanical seeds. Gamma irradiated in vitro culture plantlets of varieties SM 909-25 and Col 2215 identified 12 clones with dry matter content above 40% and five clones with high beta carotenoid content. Cassava mosaic disease (CMD) resistant varieties/land race are presently being used for mutation breeding to reduce the effect of this devastating disease in Africa and irradiated plants are being selfed to generate M2 populations. Crosses of Latin American varieties having cream or deep yellow coloured-roots and crude protein contents of 3-8%.were made to generate populations with combined enhanced beta carotene and high protein contents in cassava roots. A total of 1555 seeds were derived from 17 parents. They were genotyped in marker-assisted selection (MAS) for resistance to cassava mosaic disease (CMD) using one SSR marker, NS158 and a SCAR marker, RME 1. Fourteen percent (138 plants) were selected for CMD resistance and are being evaluated in the breeding scheme. Delayed post harvest physiological deterioration (PPD) have been introgressed from Manihot Walkerae and and backcross populations developed. About 150 SSR polymorphic markers were used for mapping in delayed PPD population resulting in the identification of three putative markers for this trait. A BC2 population for delayed PPD and CMD resistance have been developed. Initial results obtained with irradiated germplasm indicates that induced mutation can rapidly facilitate the development of value-added traits in cassava. The development of new populations for root quality traits using parental lines from Latin America in combination with MAS are also contributing immensely in the breeding for

  5. Indigenous knowledge of animal breeding and breeds

    OpenAIRE

    I. Kohler-Rollefson

    2004-01-01

    Indigenous knowledge of animal breeding (IK-AB) includes concepts and practices used to influence the genetic composition of herds. Indigenous selection is often based on preferences based on physical characteristics, vigor, social and economic insurance. This issue paper summarizes the value of indigenous knowledge and local breeds to achieve agricultural sustainability. Links to IK-AB information are also provided. Available in SANREM office, ES

  6. Improving the reliability of female fertility breeding values using type and milk yield traits that predict energy status in Australian Holstein cattle.

    Science.gov (United States)

    González-Recio, O; Haile-Mariam, M; Pryce, J E

    2016-01-01

    The objectives of this study were (1) to propose changing the selection criteria trait for evaluating fertility in Australia from calving interval to conception rate at d 42 after the beginning of the mating season and (2) to use type traits as early fertility predictors, to increase the reliability of estimated breeding values for fertility. The breeding goal in Australia is conception within 6 wk of the start of the mating season. Currently, the Australian model to predict fertility breeding values (expressed as a linear transformation of calving interval) is a multitrait model that includes calving interval (CVI), lactation length (LL), calving to first service (CFS), first nonreturn rate (FNRR), and conception rate. However, CVI has a lower genetic correlation with the breeding goal (conception within 6 wk of the start of the mating season) than conception rate. Milk yield, type, and fertility data from 164,318 cow sired by 4,766 bulls were used. Principal component analysis and genetic correlation estimates between type and fertility traits were used to select type traits that could subsequently be used in a multitrait analysis. Angularity, foot angle, and pin set were chosen as type traits to include in an index with the traits that are included in the multitrait fertility model: CVI, LL, CFS, FNRR, and conception rate at d 42 (CR42). An index with these 8 traits is expected to achieve an average bull first proof reliability of 0.60 on the breeding objective (conception within 6 wk of the start of the mating season) compared with reliabilities of 0.39 and 0.45 for CR42 only or the current 5-trait Australian model. Subsequently, we used the first eigenvector of a principal component analysis with udder texture, bone quality, angularity, and body condition score to calculate an energy status indicator trait. The inclusion of the energy status indicator trait composite in a multitrait index with CVI, LL, CFS, FNRR, and CR42 achieved a 12-point increase in

  7. Sire carcass breeding values affect body composition in lambs--2. Effects on fat and bone weight and their distribution within the carcass as measured by computed tomography.

    Science.gov (United States)

    Anderson, F; Williams, A; Pannier, L; Pethick, D W; Gardner, G E

    2016-06-01

    This study assessed the effect of paternal Australian Sheep Breeding Values for post weaning c-site eye muscle depth (PEMD) and fat depth (PFAT), and post weaning weight (PWWT) on the composition of lamb carcasses. Composition was measured using computed tomography scans of 1665 lambs which were progeny of 85 Maternal, 115 Merino and 155 Terminal sires. Reducing sire PFAT decreased carcass fat weight by 4.8% and increased carcass bone by 1.3% per unit of PFAT (range 5.1 mm). Increasing sire PEMD reduced carcass fat weight by 3.8% in Maternal and 2% in Terminal sired lambs per unit of PEMD (range 4.3 and 7.8 mm), with no impact on bone. Increasing sire PWWT reduced carcass fat weight, but only at some experimental locations. Differences in composition varied between sire types with Maternal sired lambs having the most fat and Merino sired lambs the greatest bone weight. Genetic effects on fatness were greater than the environmental or production factor effects, with the converse true of bone. PMID:26914513

  8. Reference values in blood elements in crioula breed horses by nuclear methodology; Valores de referencia de elementos em sangue de cavalos da raca crioula via metodologia nuclear

    Energy Technology Data Exchange (ETDEWEB)

    Baptista, Tatyana Spinosa

    2010-07-01

    In this study the reference value for Br (0,0008 - 0,0056 gL{sup -1}), Ca (0,089 - 0,369 gL{sup -1}), Cl (2,10 - 3,26 gL{sup -1}), Fe (0,381 - 0,689 gL{sup -1}), I (0,00018 - 0,00266 gL{sup -1}), K (1,14 - 2,74 gL{sup -1}), Mg (0,030 - 0,074 gL{sup -1}), Na (1,36 - 2,80 gL{sup -1}), P (<1,99 gL{sup -1}), S (0,99 - 2,79 gL{sup -1}) and Zn (0,0012 - 0,0048 gL{sup -1}) as well as the correlation matrix in blood of Crioulo breed horses were determined using nuclear methodology (Neutron Activation Analysis Technique). These data allowed to identifying physiological alterations related to the sex and regime of exercise (hyperimmune sera production at Butantan Institute, Sao Paulo, Brasil). To perform these analyses was used 20 adult horses (8 males and 12 females), with average mass 350 kg, without clinical signs of disease, 1-3 years old, kept on pasture in Sao Joaquim Farm at Butantan Institute (Sao Paulo city). Other group just immunized, composed by 6 equines males (same age and weight), were also analyzed. These data are an important support to understand the physiological functions of these elements in blood during the process of sera production. (author)

  9. Physiological breeding.

    Science.gov (United States)

    Reynolds, Matthew; Langridge, Peter

    2016-06-01

    Physiological breeding crosses parents with different complex but complementary traits to achieve cumulative gene action for yield, while selecting progeny using remote sensing, possibly in combination with genomic selection. Physiological approaches have already demonstrated significant genetic gains in Australia and several developing countries of the International Wheat Improvement Network. The techniques involved (see Graphical Abstract) also provide platforms for research and refinement of breeding methodologies. Recent examples of these include screening genetic resources for novel expression of Calvin cycle enzymes, identification of common genetic bases for heat and drought adaptation, and genetic dissection of trade-offs among yield components. Such information, combined with results from physiological crosses designed to test novel trait combinations, lead to more precise breeding strategies, and feed models of genotype-by-environment interaction to help build new plant types and experimental environments for future climates. PMID:27161822

  10. Accuracy of prediction of genomic breeding values for residual feed intake and carcass and meat quality traits in Bos taurus, Bos indicus, and composite beef cattle.

    Science.gov (United States)

    Bolormaa, S; Pryce, J E; Kemper, K; Savin, K; Hayes, B J; Barendse, W; Zhang, Y; Reich, C M; Mason, B A; Bunch, R J; Harrison, B E; Reverter, A; Herd, R M; Tier, B; Graser, H-U; Goddard, M E

    2013-07-01

    The aim of this study was to assess the accuracy of genomic predictions for 19 traits including feed efficiency, growth, and carcass and meat quality traits in beef cattle. The 10,181 cattle in our study had real or imputed genotypes for 729,068 SNP although not all cattle were measured for all traits. Animals included Bos taurus, Brahman, composite, and crossbred animals. Genomic EBV (GEBV) were calculated using 2 methods of genomic prediction [BayesR and genomic BLUP (GBLUP)] either using a common training dataset for all breeds or using a training dataset comprising only animals of the same breed. Accuracies of GEBV were assessed using 5-fold cross-validation. The accuracy of genomic prediction varied by trait and by method. Traits with a large number of recorded and genotyped animals and with high heritability gave the greatest accuracy of GEBV. Using GBLUP, the average accuracy was 0.27 across traits and breeds, but the accuracies between breeds and between traits varied widely. When the training population was restricted to animals from the same breed as the validation population, GBLUP accuracies declined by an average of 0.04. The greatest decline in accuracy was found for the 4 composite breeds. The BayesR accuracies were greater by an average of 0.03 than GBLUP accuracies, particularly for traits with known genes of moderate to large effect mutations segregating. The accuracies of 0.43 to 0.48 for IGF-I traits were among the greatest in the study. Although accuracies are low compared with those observed in dairy cattle, genomic selection would still be beneficial for traits that are hard to improve by conventional selection, such as tenderness and residual feed intake. BayesR identified many of the same quantitative trait loci as a genomewide association study but appeared to map them more precisely. All traits appear to be highly polygenic with thousands of SNP independently associated with each trait. PMID:23658330

  11. Accuracy of prediction of genomic breeding values for residual feed intake and carcass and meat quality traits in Bos taurus, Bos indicus, and composite beef cattle.

    Science.gov (United States)

    Bolormaa, S; Pryce, J E; Kemper, K; Savin, K; Hayes, B J; Barendse, W; Zhang, Y; Reich, C M; Mason, B A; Bunch, R J; Harrison, B E; Reverter, A; Herd, R M; Tier, B; Graser, H-U; Goddard, M E

    2013-07-01

    The aim of this study was to assess the accuracy of genomic predictions for 19 traits including feed efficiency, growth, and carcass and meat quality traits in beef cattle. The 10,181 cattle in our study had real or imputed genotypes for 729,068 SNP although not all cattle were measured for all traits. Animals included Bos taurus, Brahman, composite, and crossbred animals. Genomic EBV (GEBV) were calculated using 2 methods of genomic prediction [BayesR and genomic BLUP (GBLUP)] either using a common training dataset for all breeds or using a training dataset comprising only animals of the same breed. Accuracies of GEBV were assessed using 5-fold cross-validation. The accuracy of genomic prediction varied by trait and by method. Traits with a large number of recorded and genotyped animals and with high heritability gave the greatest accuracy of GEBV. Using GBLUP, the average accuracy was 0.27 across traits and breeds, but the accuracies between breeds and between traits varied widely. When the training population was restricted to animals from the same breed as the validation population, GBLUP accuracies declined by an average of 0.04. The greatest decline in accuracy was found for the 4 composite breeds. The BayesR accuracies were greater by an average of 0.03 than GBLUP accuracies, particularly for traits with known genes of moderate to large effect mutations segregating. The accuracies of 0.43 to 0.48 for IGF-I traits were among the greatest in the study. Although accuracies are low compared with those observed in dairy cattle, genomic selection would still be beneficial for traits that are hard to improve by conventional selection, such as tenderness and residual feed intake. BayesR identified many of the same quantitative trait loci as a genomewide association study but appeared to map them more precisely. All traits appear to be highly polygenic with thousands of SNP independently associated with each trait.

  12. Simulated Breeding

    Science.gov (United States)

    Unemi, Tatsuo

    This chapter describes a basic framework of simulated breeding, a type of interactive evolutionary computing to breed artifacts, whose origin is Blind Watchmaker by Dawkins. These methods make it easy for humans to design a complex object adapted to his/her subjective criteria, just similarly to agricultural products we have been developing over thousands of years. Starting from randomly initialized genome, the solution candidates are improved through several generations with artificial selection. The graphical user interface helps the process of breeding with techniques of multifield user interface and partial breeding. The former improves the diversity of individuals that prevents being trapped at local optimum. The latter makes it possible for the user to fix features he/she already satisfied. These methods were examined through artistic applications by the author: SBART for graphics art and SBEAT for music. Combining with a direct genome editor and exportation to another graphical or musical tool on the computer, they can be powerful tools for artistic creation. These systems may contribute to the creation of a type of new culture.

  13. 东北优异大豆育种价值评价%Breeding Value Evaluation of Soybean Varieties in Northeastern China

    Institute of Scientific and Technical Information of China (English)

    张振宇; 刘秀芝; 郭泰; 王志新; 郑伟; 李灿东; 刘忠堂; 吴秀红

    2014-01-01

    To solve the issue that the genetic basis is increasingly narrow of soybean varieties, used of 572 soybean varieties resources as test materials, to make a survey of planting and important agronomic traits and to dig out the main agronomic traits affecting the yield and quality. Finally, the soybean varieties breeding value of resources was been evaluated. The height variation range was 40.2-137.2 cm; average of 88.54 cm. The number of branches variation ranged from 0 to 9;the average of 3.61. The number of pods per plant variation ranged from 11.2 to 220;average of 76.64. Grain weight per plant variation ranged from 1.03 to 86.1 g;With a mean of 29.01 g. Hundred grain weight variation range of 4.87-30.31 g; With a mean of 18.87 g. Lodging resistance variation ranged from 0 to 3 level; average of 0.51. Protein content variation range of 13.28%-23.47%;Average of 20.56%. Oil content variation range of 34.41%-34.41%;Average of 40.71%. According to the contrast variety showed that 572 soybean varieties breeding value of resources was evaluated. The more prominent germplasm of yield were‘Heinong 19’;‘Heilong 2’and‘Longpinhei 09-518’. The kernel weight of the larger species were‘Jiunong 14’;‘Changnong15’,‘Lingyin 2’, and‘Nenliange 6’;higher oil content of germplasm:‘Kennong 18’,‘long farming 17’,‘Kenfeng 6’,‘Jovo 10’and‘Kenjiandou 15’;higher protein content germplasm:‘Kut purple pig-eyed peas’,‘white Mo fresh beans’,‘arabica beans fresh fodder’,‘green flesh black beans’,‘black beans’and‘Jilin 27’.%为了解决目前大豆品种的遗传基础日趋狭窄的问题,利用572份大豆品种资源为试验材料,进行种植和重要农艺性状调查,挖掘出影响产量和品质的主要农艺性状,最后对大豆品种资源的育种价值进行评价。株高变异幅度为40.2~137.2 cm;平均值为88.54 cm。分枝数变异幅度为0~9个;平均值为3.61个。

  14. Breeding hop

    OpenAIRE

    Langrová, Kristýna

    2012-01-01

    Summary The subject of the provided extended essay is Hop Breeding. The work is aimed at the hops biology. Concretely it describes the biology and morfology of hop plant, underground and above-ground part of the plant, infructescence and inflorescence, the morphology and chemical composition of the head. Subsequently it defines qualitative characteristics of hops head, surcharges and substractions of damaged or destroyed hops. It describes a new system of hop certification and imp...

  15. Bee Queen Breeding Methods - Review

    Directory of Open Access Journals (Sweden)

    Silvia Patruica

    2016-05-01

    Full Text Available The biological potential of a bee family is mainly generated by the biological value of the queen. Whether we grow queens widely or just for our own apiaries, we must consider the acquisition of high-quality biological material, and also the creation of optimal feeding and caring conditions, in order to obtain high genetic value queens. Queen breeding technology starts with the setting of hoeing families, nurse families, drone-breeding families – necessary for the pairing of young queens, and also of the families which will provide the bees used to populate the nuclei where the next queens will hatch. The complex of requirements for the breeding of good, high-production queens is sometimes hard to met, under the application of artificial methods. The selection of breeding method must rely on all these requirements and on the beekeeper’s level of training.

  16. 小麦种质资源在育种上应用价值的鉴定与评价%Identification and Evaluation of Application Value of Wheat Germplasm Resources in Breeding

    Institute of Scientific and Technical Information of China (English)

    王永玖; 闫洪凯; 于国宜; 张亮; 张磊; 王志学; 张; 牛存秀

    2011-01-01

    [目的]鉴定与评价小麦种质资源在育种上的应用价值.[方法]对260份小麦育种材料的冬春性、抗寒性、抗病性及一些农艺性状进行了观察记载,并对部分性状进行了室内分子标记检测鉴定.[结果]小麦的冬春性受春化基因的控制,决定着小麦的种植区域,小麦的抗寒性和生育期与冬春性密切相关;小麦抗病性的室内分子检测结果与田间的抗性表现基本一致,通过对各种病害(白粉病、纹枯病、叶锈病)病情指数的相关性进行分析发现,抗病性间相关性不显著;通过对部分已审定品种的产量结构和综合农艺性状进行分析,了解了目前育成品种的产量结构和产量水平.[结论]为小麦育种研究提供了理论依据.%[ Objective ] The aim was to identify and evaluate the application value of wheat germplasm resources in breeding. [ Method ] Some agronomic characters of 260 wheat breeding materials like winter and spring trait, cold resistance and disease resistance were observed, furthermore some agronomic characters were identified by indoor molecular marker detection. [ Result] The winter and spring trait of wheat was controlled by vernalization gene, which decided the planting area of wheat. Cold resistance and growth period of wheat were closely related to the winter and spring trait. Results of indoor molecular marker detection was basically identical with the resistance performance in field. Correlation analysis on disease indexes of various diseases like powdery mildew resistance, sheath blight and leaf rust disease showed that there was no significant correlation among the diseases, Yield structure and yield level of present breeding varieties were understood by analyzing yield structure and comprehensive agronomic characters of some approved varieties. [ Conclusion] The research provides theoretical basis for studies on wheat breeding.

  17. 三疣梭子蟹‘黄选1号’生长和育种性能分析%Analysis of the growth and breeding value of Portunus trituberculatus‘Huangxuan No.1’

    Institute of Scientific and Technical Information of China (English)

    高保全; 刘萍; 李健

    2015-01-01

    以家系为分析单元,测量三疣梭子蟹(Portunus trituberculatus)‘黄选1号’新品种在80、100日龄的甲宽、体高和体质量3个性状,运用“海水养殖甲壳类动物育种数据管理与分析系统V1.0”及SPSS13.0软件,对其生长性能、遗传力及育种值进行分析,探讨育种值选择在三疣梭子蟹遗传育种中的应用。结果显示,三疣梭子蟹‘黄选1号’80、100日龄的生长速度分别提高16.20%和19.35%,显示了较大的生长优势;采用REML法进行遗传力评估,发现三疣梭子蟹甲宽、体高、体质量80日龄遗传力分别为0.164、0.304、0.167,100日龄遗传力分别为0.125、0.241、0.117,属于中低度遗传力,说明采用家系选择方法对三疣梭子蟹‘黄选1号’继续遗传改良效果更佳;最后通过BLUP方法评估家系育种值(EBV),比较发现育种值选择效率比表型值选择效率提高11.1%~19.38%。因此根据育种值进行三疣梭子蟹家系选择,在5%选择强度下利用表型值进行亲本选留,是目前比较理想的三疣梭子蟹选育模式。该结论为三疣梭子蟹的遗传改良提供了理论依据。%Portunus trituberculatus is an economically important food species in China. In recent years, with the rapid expansion and intensification of P. trituberculatus culture, various problems such as disease, larval degen-eration and natural resource depletion have resulted in economic losses in this species. Therefore, studies on se-lective breeding are important. In this paper, the growth performance, heritability and breeding value of P. tritu-berculatus were estimated by full-sibs family mating experiments. In August 2010, a total of 200 mature crabs were taken from a core breeding population of the new variety of P. trituberculatus‘Huangxuan No.1’. Fifty males and 150 females were used for mating. Those that died or had not mated were removed from the study. The re-maining 92 females were moved to an indoor pond for

  18. Cattle breeding goals and production circumstances.

    NARCIS (Netherlands)

    Groen, A.F.

    1989-01-01

    This thesis gives the results of a study on the relationship between cattle breeding goals and production circumstances. The relationship between breeding goals and production circumstances mostly arises from the influences of production circumstances on the economic values of geneticim

  19. Penning-trap Q-value determination of the Ga-71(v, e(-))Ge-71 reaction using threshold charge breeding of on-line produced isotopes

    NARCIS (Netherlands)

    Frekers, D.; Simon, M.C.; Andreoiu, C.; Bale, J. C.; Brodeur, M.; Brunner, T.; Chaudhuri, A.; Chowdhury, U.; Lopez-Urrutia, J. R. Crespo; Delheij, P.; Ejiri, H.; Ettenauer, S.; Gallant, A. T.; Gavrin, V.; Grossheim, A.; Harakeh, M. N.; Jang, F.; Kwiatkowski, A. A.; Lassen, J.; Lennarz, A.; Luichtl, M.; Ma, T.; Macdonald, T. D.; Mane, E.; Robertson, D.; Schultz, B. E.; Simon, V. V.; Teigelhoefer, A.; Dilling, J.

    2013-01-01

    We present a first direct Q-value measurement of the Ga-71(v, e(-))Ge-71 reaction using the TITAN mass-measurement facility at ISAC/TRIUMF. The measurements were performed in a Penning trap on neon-like Ga-71(21+) and Ge-71(22+) using isobar separation of the on-line produced mother and daughter nuc

  20. Genetic variance and breeding values for resistance to a wind-borne disease [Sphaerotheca macularis (Wallr. ex Fr.)] in strawberry (Fragaria x ananassa Duch.) estimated by exploring mixed and spatial models and pedigree information.

    Science.gov (United States)

    Davik, Jahn; Honne, Bjørn Ivar

    2005-07-01

    A mixed model approach was used to estimate variance components and heritabilities for resistance to powdery mildew, a wind-borne disease in strawberry. In order to improve precision in the statistical computations, spatial error control effects were included to account for systematic environmental variations in the large field trials. Pedigree information was included where feasible. Seedling families obtained from an incomplete 63-by-63 diallel cross were grown at six locations and scored subjectively for mildew attack three times during the growing season. The 63 parents included both European and American cultivars as well as advanced selections from various breeding programmes. A total of 298 full-sib families were realized, including 26 reciprocal families. No reciprocal differences were found. On a plot-mean basis, the broad-sense heritability was found to be intermediate, H(2) = 0.44-0.50, depending on whether the pedigree information was included in the model or not. The increase was mainly due to a substantial increase in the additive variance component. Likewise, the narrow-sense heritability increased from h(2) = 0.39 to h(2) = 0.45 when the pedigree information was included, while the ratio of the specific combining ability variance to the general combining ability variance fell from 13% to 10%. The predicted breeding values of the 63 parents demonstrate that important cultivars such as Elsanta and Korona are unlikely to produce progenies with a high degree of resistance. On the other hand, the Norwegian cultivar Solprins, the Canadian cultivar Kent and the Italian cultivar Patty appeared to give highly resistant progeny. At the full-sib level, the estimated disease scores ranged from 1.15 (Kent x Induka) to 4.19 (Cavendish x Avanta), revealing a huge range of variation for powdery mildew resistance available for selection.

  1. Buffaloes breeding in Brasil

    OpenAIRE

    O. Bernardes

    2010-01-01

    Differently from what one could formerly imagine, that buffalo breeding activity would be solely directed to fill the so called cattle breeding gaps determined by inadequate environmental conditions for ordinary cattle breeding, it has been actually seen that in those areas where breeders could successfully organize industrial-agricultural chains, either on meat or milk and its related products production, there has been an expressive expansion .Buffalo breeding has shown to be an important a...

  2. Induced mutations in sesame breeding

    International Nuclear Information System (INIS)

    The scope of induced mutations in sesame (Sesamum indicum L.) breeding is reviewed. So far in Egypt, India, Iraq, Rep. of Korea, and Sri Lanka, 14 officially released varieties have been developed through induced mutations: 12 directly and 2 through cross breeding (one using the 'dt45' induced mutant from Israel). For another variety released in China there are no details. The induced mutations approach was adopted primarily in order to obtain genetic variability that was not available in the germplasm collection. The mutagens commonly applied have been gamma rays, EMS and sodium azide. Sesame seeds can withstand high mutagen doses, and there are genotypic differences in sensitivity between varieties. The mutants induced in the above named countries and others include better yield, improved seed retention, determinate habit, modified plant architecture and size, more uniform and shorter maturation period, earliness, resistance to diseases, genic male sterility, seed coat color, higher oil content and modified fatty acids composition. Some of the induced mutants have already given rise to improved varieties, the breeding value of other mutants is now being assessed and still others can serve as useful markers in genetic studies and breeding programmes. (author)

  3. Inferência robusta e heterocedástica em componentes de variância, parâmetros e valores genéticos multirraciais Robust and heteroskedastic inference in multibreed variance components, genetic parameters and breeding values

    Directory of Open Access Journals (Sweden)

    M.M. Oliveira

    2011-04-01

    and genetic values estimates were evaluated. It was used 4,016 records of post weaning weight gain (PWG from Brangus foundation herd of Embrapa Pecuária Sul. Data were analyzed by MAMR with four different residual distribution specifications, which were defined by the nature of residual variance, homoskedastic (HO or Heteroskedastic (HE and by the Gaussian (G or Student t marginal residual distribution. The best data fit was achived by using MAMR-T-HE and it was observed heteroscedasticity due to sex and animal heterozigosity and among contemporary groups. There were substantial differences in genetic variances of breed groups estimated by using different models and in the heteroskedastic, MAMR-G-HE and MAMR-T-HE. The greatest differences on heritability estimates occured among different breed groups. It was also noted a reordering in the ranking of superior animals regarded to genetic merit when heterogenous residual variances and robustness to outliers were considered. Multibreed genetic evaluations by using the Student t distribution model to describe residuals and assuming heterogenous residual variances are more appropriate to perform inference on genetic merit of animals from crossbreeding progenies of Angus and Nelore purebred animals.

  4. Hybrid reactors: nuclear breeding or energy production?

    OpenAIRE

    Piera, Mireia; Lafuente Mazuecos, Antonio; Abánades Velasco, Alberto; Martínez-Val Peñalosa, Jose Maria

    2010-01-01

    After reviewing the long-standing tradition on hybrid research, an assessment model is presented in order to characterize the hybrid performance under different objectives. In hybrids, neutron multiplication in the subcritical blanket plays a major role, not only for energy production and nuclear breeding, but also for tritium breeding, which is fundamental requirement in fusion–fission hybrids. All three objectives are better achieved with high values of the neutron multiplication factor (k-...

  5. Tritium breeding in fusion reactors

    Energy Technology Data Exchange (ETDEWEB)

    Abdou, M.A.

    1982-10-01

    Key technological problems that influence tritium breeding in fusion blankets are reviewed. The breeding potential of candidate materials is evaluated and compared to the tritium breeding requirements. The sensitivity of tritium breeding to design and nuclear data parameters is reviewed. A framework for an integrated approach to improve tritium breeding prediction is discussed with emphasis on nuclear data requirements.

  6. Tritium breeding materials

    International Nuclear Information System (INIS)

    Tritium breeding materials are essential to the operation of D-T fusion facilities. Both of the present options - solid ceramic breeding materials and liquid metal materials are reviewed with emphasis not only on their attractive features but also on critical materials issues which must be resolved

  7. Blackberry breeding and genetics

    Science.gov (United States)

    Blackberry (Rubus L. subgenus Rubus Watson) improvement has made substantial progress with over 400 cultivars named originating from wild selections to many releases from breeding efforts. Public breeding has been ongoing for over 100 years. The result of these improvements is commercial production ...

  8. Efeito de valores discrepantes em grupos de contemporâneos na predição dos valores genéticos Effect of outliers in contemporary groups on breeding value prediction

    Directory of Open Access Journals (Sweden)

    Mirella Leme Franco Geraldini Sirol

    2007-08-01

    replication was divided into three different sets of contemporary (CG and progeny groups. The first set (I was formed by 1,000 contemporary groups, 100 observations each and 10 progenies/sire. The second set (II included 2,500 CG, 40 observations and 4 progenies/sire. The third set (III consisted of 5,000 CG, 20 observations and two progenies/sire. The number of records per group and sire and the number of sires per group varied within the same set. In each population, GMD1 was transformed by DIAS1=100/GMD1. The contribution of CG to sire breeding value predictions were calculated for GMD1 (Cx and DIAS1 (Cy. The maximum and the average of DIAS1 effects on Cy absolute value were significant, but the R² were low (maximum of 16%. The minimum value of DIAS1 has not influenced Cy. The maximum and the minimum of GMD1 on Cx were significant, but the R² were very low (maximum 2%. The GMD1 average has not affected Cx. The effect of the minimum value of DIAS1 was important to determine the CG effect on breeding value of sires with progeny in the set. A very low value of GMD1 for an animal corresponds to a high value of DIAS1 and affects the values of the other animals and the CG average. This effect has an impact on the evaluation of their sires and will be an important source of error in the genetic evaluation of the herd. Thus, the replacement of GMD1 by DIAS1 as selection criteria for growth is not recommended because it will reduce the possibility of genetic gain.

  9. Buffaloes breeding in Brasil

    Directory of Open Access Journals (Sweden)

    O. Bernardes

    2010-02-01

    Full Text Available Differently from what one could formerly imagine, that buffalo breeding activity would be solely directed to fill the so called cattle breeding gaps determined by inadequate environmental conditions for ordinary cattle breeding, it has been actually seen that in those areas where breeders could successfully organize industrial-agricultural chains, either on meat or milk and its related products production, there has been an expressive expansion .Buffalo breeding has shown to be an important alternative not only in farms of higher technological level as also , and mainly, on small farms where it has become a key factor for increasing the average income, besides keeping labor force in country areas. This article intends to point out and examine some aspects of buffalo breeding and its potentialities in Brazil.

  10. LINE CONSTRUCTION OF NONIUS BREED IN SLOVAKIA

    Directory of Open Access Journals (Sweden)

    Eva Mlyneková

    2013-12-01

    Full Text Available Nowadays breeding has become the problem often solved in European states and it has been paid much attention by breeding organizations. In terms of hippology as well as some urgent requirements from the side of nonius breeders we have focussed on this particular breed especially from the reason of its further survival and development in Slovakia. The aim of this paper was to evaluate the growth indicators as well as the achievement level of the stallions since 1927 to the present. Based on our research of the nonius body lines we can state that at present there are 3 stallions that are followers of the N VIII horse line founder. In general, there are 12 stallions that are active within this breed in Slovakia. It was statistically confirmed that this particular breed grew much stronger through the goal-directed breeding work, improved nutrition as well as the immediate breeding site. It was quite complicated to evaluate the performance tests because the individual indicators were significantly influenced by the subjective views of the commitee members performing the evaluation. The next factor which prevents the objective evaluation is the fact that in the period up to 1979, the performance tests were valued by the 100 point system and from the year 1980 by the 10 point system. That is why we take the performance test results into account only as supplemental ones, which can provide a kind of amendment to the observed biological parameters.

  11. Iberian origins of New World horse breeds.

    Science.gov (United States)

    Luís, Cristina; Bastos-Silveira, Cristiane; Cothran, E Gus; Oom, Maria do Mar

    2006-01-01

    Fossil records, archaeological proofs, and historical documents report that horses persisted continuously in the Iberian Peninsula since the Pleistocene and were taken to the American continent (New World) in the 15th century. To investigate the variation within the mitochondrial DNA (mtDNA) control region of Iberian and New World horse breeds, to analyze their relationships, and to test the historical origin of New World horses, a total of 153 samples, representing 30 Iberian and New World breeds, were analyzed by sequencing mtDNA control region fragments. Fifty-four haplotypes were found and assigned to seven haplogroups. Reduced levels of variation found for the Menorquina, Sorraia, and Sulphur Mustang breeds are consistent with experienced bottlenecks or limited number of founders. For all diversity indices, Iberian breeds showed higher diversity values than South American and North American breeds. Although, the results show that the Iberian and New World breeds stem from multiple origins, we present a set of genetic data revealing a high frequency of Iberian haplotypes in New World breeds, which is consistent with historical documentation. PMID:16489143

  12. PRINCIPLES OF ANIMAL BREEDING

    Directory of Open Access Journals (Sweden)

    Sonja Jovanovac

    2014-06-01

    Full Text Available University textbook Principles of Animal Breeding is intended for students of agriculture and veterinary medicine. The material is the adapted curricula of undergraduate and graduate level studies in the framework of which the modules Principles of animal breeding as well as Basics of genetics and selection of animals attended are listened. The textbook contains 14 chapters and a glossary of terms. Its concept enables combining fundamental and modern knowledge in the breeding and selection of animals based on balanced and quality manner. The textbook material can be divided into several thematic sections. The first one relates to the classical notions of domestic animals breeding such as the history of breeding, domestication, breed, hereditary and non-hereditary variability and description of general and production traits. The second section focuses on the basic concepts in population and quantitative genetics, as well as biometrics. The third unit is dedicated to the principles of selection and domestic animals improving. The fourth unit relates to the current concepts and objectives of the molecular markers use in domestic animals selection and breeding. The above material has been submitted to the Croatian universities, but so far it has not been published as a textbook. The Ministry of Science, Education and Sports of Republic of Croatia approved financial support for the textbook publication.

  13. EFFECT OF BREED, SEX AND SOURCE WITHIN BREED ON THE HEAMATOGICAL PARAMETERS OF THE NIGERIAN GOATS

    Directory of Open Access Journals (Sweden)

    J.C. OKONKWO

    2011-01-01

    Full Text Available Effect of breed, sex and source within breed, together with their interactions on the haematological parameters of Nigerian goats were studied using 81 goats (comprising 9 males and 18 females per breed, objective being to characterize and outline the differences and similarities between the breeds in blood parameters. The goats were derived from different geo-ecological zones in the country based on the areas of preponderance of each breed. The breeds studied were: the Sahel goat (SG, Red Sokoto goat (RSG, and West African Dwarf goat (WADG and hematological values obtained per breed were: 22.52±1.48, 23.04±3.56, and 29.22±4.76 (%PCV; 7.52±0.50, 7.82±1.25 and 9.48±1.60 (g/dl Hb; 2.71±0.23, 3.09±0.64, and 4.10±0.42 (x1012/l RBC; 11.94±1.10, 11.32±2.03 and 9.23±0.63 (x109cells/l WBC, and 83.22±1.67, 76.72±2.30 and 73.34±3.40 (x106/mm3 MCV, respectively. Significant differences (P0.05 for all the breeds. The WADGs were superior to the RSGs and SGs in PCV, Hb, and RBC counts, but lower in WBC counts and MCV. The SGs were similar in most of the haematological profiles examined, irrespective of geo-ecological distance, indicating homogeneity of the breed. The sahelian goat breed also outscored other breeds in MCV, showing that the breed has greater propensity to transport oxygen and in situation occasioning oxygen starvation, the breed survives better. This explains the reason for the survival of the breed in arid and semi-arid zone. Gender has no effect on the MCV and the values of 83.22±1.67x106/mm3, 76.72±2.30x106/mm3 and 73.34±3.40x106/mm3 were observed for the SG, RSG, and WADG, respectively.

  14. Garlic breeding system innovations

    NARCIS (Netherlands)

    Zheng, S.J.; Kamenetsky, R.; Féréol, L.; Barandiaran, X.; Rabinowitch, H.D.; Chovelon, V.; Kik, C.

    2007-01-01

    This review outlines innovative methods for garlic breeding improvement and discusses the techniques used to increase variation like mutagenesis and in vitro techniques, as well as the current developments in florogenesis, sexual hybridization, genetic transformation and mass propagation. Sexual ste

  15. Birds - Breeding [ds60

    Data.gov (United States)

    California Department of Resources — This data set provides access to information gathered on annual breeding bird surveys in California using a map layer developed by the Department. This data layer...

  16. Breeding for disease resistance

    OpenAIRE

    Pinard-van der Laan, Marie-Helene

    2013-01-01

    In the context of intensification and specialization of poultry production, next to welfare regulation on animal breeding, animal health issues are of increasing importance to the breeding sector because of the huge related production losses. But animal health and welfare issues are also of importance to the consumers because of potential effects on their own health and their lifestyle choices. Most effective disease control strategies should be developed in an integrated animal health manage...

  17. PRINCIPLES OF ANIMAL BREEDING

    OpenAIRE

    Sonja Jovanovac

    2014-01-01

    University textbook Principles of Animal Breeding is intended for students of agriculture and veterinary medicine. The material is the adapted curricula of undergraduate and graduate level studies in the framework of which the modules Principles of animal breeding as well as Basics of genetics and selection of animals attended are listened. The textbook contains 14 chapters and a glossary of terms. Its concept enables combining fundamental and modern knowledge in the ...

  18. Welfare in horse breeding

    OpenAIRE

    Campbell, M L H; Sandøe, Peter

    2015-01-01

    Welfare problems related to the way horses are bred, whether by coitus or by the application of artificial reproduction techniques (ARTs), have been given no discrete consideration within the academic literature. This paper reviews the existing knowledge base about welfare issues in horse breeding and identifies areas in which data is lacking. We suggest that all methods of horse breeding are associated with potential welfare problems, but also that the judicious use of ARTs can sometimes hel...

  19. Impact of changes in weight, fat depth, and loin muscle depth on carcass yield and value and implications for selection and pricing of rams from terminal-sire sheep breeds

    Science.gov (United States)

    Breeding objectives and selection indexes are necessary to support comprehensive genetic improvement programs. This study used off-test body weights (OTBW) or chilled carcass weights (CCW), ultrasonic measurements of fat depth (USFD, mm), and predicted ultrasound loin muscle depths (USLMD, mm) from ...

  20. Objetivos de seleção para sistemas de produção de gado de corte em pasto: ponderadores econômicos Economic values for breeding goal traits for Brazilian beef cattle production

    Directory of Open Access Journals (Sweden)

    T.C.C. Bittencourt

    2006-04-01

    Full Text Available Foram desenvolvidos objetivos de seleção para gado de corte criado nas condições de produção típicas do Brasil Central. As características consideradas foram: número de bezerros desmamados por vaca/ano (NBD, peso da carcaça (PC, peso à desmama (PD e consumo de alimento. Foram adotados dois sistemas de produção, um que considerava somente a cria e outro, o ciclo completo (cria, recria e engorda. No primeiro, as receitas foram a venda de bezerros à desmama, novilhas excedentes e vacas de descarte. No segundo, a receita foi a venda das novilhas excedentes, vacas de descarte e novilhos para o abate. Em ambas as situações, o lucro (USD/vaca/ano foi estimado pela diferença entre receita e despesa. Os valores econômicos estimados foram expressos em dólar por unidade de mudança na característica, calculados na base vaca/ano. O valor econômico foi calculado avaliando-se a alteração ocorrida no lucro quando a característica era incrementada de uma unidade, permanecendo as demais inalteradas. A característica que apresentou maior valor bruto do ponderador econômico foi o NBD, seguida pelo consumo, PC e PD. Quando se considerou o valor econômico, em unidades de desvio-padrão genético-aditivo, a ordem de importância foi consumo, PC, NBD e PD.Breeding objectives were developed for beef cattle production under typical economic and environmental conditions of central Brazil. The traits considered were: calves weaned per cow/year (NCW, weaning weight (WW, carcass weight (CW and food intake. In the study, two systems were examined, a cow-calf system (surplus calves sold after weaning and a cow-calf enterprise (in which surplus calves are raised for slaughter. In the first, income is from the sale of male calves and surplus heifers after weaning and of culled cows. In the second, the income is from the sale of steers, surplus heifers and culled cows. For both situations, the profit (US$/cow/year was estimated by the difference

  1. [Prediction of retained heterosis and evaluation on breeding effects of composite livestock populations].

    Science.gov (United States)

    Liu, Wen-Zhong

    2009-08-01

    A composite population is a breed made up of two or more component breeds and designed to benefit from hybrid vigor without crossing with other breeds, and is thus regarded as an alternative method for heterosis utilization. The breeding effects depend on retained heterosis in livestock composites. This paper reviews prediction methods of retained heterosis, relative production efficiency and production performance, and evaluation methods of breeding effects of composite populations. A composite population contains all three types of heterosis. If inbreeding can be avoided, it can retain heterosis to a certain extent. The retained heterosis depends on the number of contributing breeds and their proportions in the composite. The production performance rests both on average breeding values of contributing breeds and on retained heterosis of the composite itself. Breeding effects of composite population can be evaluated by theoretical prediction, actual estimation of retained heterosis, examination of genetic variation and/or comparison with other relevant breeds. PMID:19689939

  2. Breeding schemes in reindeer husbandry

    Directory of Open Access Journals (Sweden)

    Lars Rönnegård

    2003-04-01

    Full Text Available The objective of the paper was to investigate annual genetic gain from selection (G, and the influence of selection on the inbreeding effective population size (Ne, for different possible breeding schemes within a reindeer herding district. The breeding schemes were analysed for different proportions of the population within a herding district included in the selection programme. Two different breeding schemes were analysed: an open nucleus scheme where males mix and mate between owner flocks, and a closed nucleus scheme where the males in non-selected owner flocks are culled to maximise G in the whole population. The theory of expected long-term genetic contributions was used and maternal effects were included in the analyses. Realistic parameter values were used for the population, modelled with 5000 reindeer in the population and a sex ratio of 14 adult females per male. The standard deviation of calf weights was 4.1 kg. Four different situations were explored and the results showed: 1. When the population was randomly culled, Ne equalled 2400. 2. When the whole population was selected on calf weights, Ne equalled 1700 and the total annual genetic gain (direct + maternal in calf weight was 0.42 kg. 3. For the open nucleus scheme, G increased monotonically from 0 to 0.42 kg as the proportion of the population included in the selection programme increased from 0 to 1.0, and Ne decreased correspondingly from 2400 to 1700. 4. In the closed nucleus scheme the lowest value of Ne was 1300. For a given proportion of the population included in the selection programme, the difference in G between a closed nucleus scheme and an open one was up to 0.13 kg. We conclude that for mass selection based on calf weights in herding districts with 2000 animals or more, there are no risks of inbreeding effects caused by selection.

  3. Intermittent breeding as a cost of site fidelity

    NARCIS (Netherlands)

    Bruinzeel, Louis

    2007-01-01

    Intermittent breeding (skipping a breeding season) can be the result of an adaptive decision by a focal individual, trading current reproductive success in favour of future reproductive success (residual reproductive value hypothesis). In contrast, an individual can also be forced by conspecifics to

  4. Veal fatty acid composition of different breeds

    OpenAIRE

    Ivica Kos; Jelena Ramljak; Ante Ivanković; Miljenko Konjačić; Nikolina Kelava

    2010-01-01

    Veal fatty acid composition in M. Longissimus thoracis was investigated in different calf breeds (Simmental, Holstein, Simmental x Holstein). Calves were reared on the same farm under identical feeding and handling conditions. Simmental calves had higher polyunsaturated fatty acid (PUFA) but lower saturated fatty acid (SFA) and monounsaturated fatty acid (MUFA) values than Holstein and crossbreed calves (P

  5. Welfare in horse breeding

    DEFF Research Database (Denmark)

    Campbell, M.L.H.; Sandøe, Peter

    2015-01-01

    Welfare problems related to the way horses are bred, whether by coitus or by the application of artificial reproduction techniques (ARTs), have been given no discrete consideration within the academic literature. This paper reviews the existing knowledge base about welfare issues in horse breeding...... and identifies areas in which data is lacking. We suggest that all methods of horse breeding are associated with potential welfare problems, but also that the judicious use of ARTs can sometimes help to address those problems. We discuss how negative welfare effects could be identified and limited and how...

  6. Precision animal breeding

    OpenAIRE

    Flint, A.P.F.; WOOLLIAMS, J. A.

    2007-01-01

    We accept that we are responsible for the quality of life of animals in our care. We accept that the activities of man affect all the living things with which we share this planet. But we are slow to realize that as a result we have a duty of care for all living things. That duty extends to the breeding of animals for which we are responsible. When animals are bred by man for a purpose, the aim should be to meet certain goals: to improve the precision with which breeding outcomes can be predi...

  7. Hop Cultivars and Breeding

    Science.gov (United States)

    Pest management decision making in hops varies among cultivars. Historically, the primary objective of hop breeding programs has been to increase the yield or characteristics associated with either bittering (high alpha-acids) or aroma (unique volatile oil profiles) cultivars. Other factors consid...

  8. Mutation breeding in mangosteen

    International Nuclear Information System (INIS)

    Mangosteen the queen of the tropical fruits is apomitic and only a cultivar is reported and it reproduces asexually. Conventional breeding is not possible and the other methods to create variabilities are through genetic engineering and mutation breeding. The former technique is still in the infantry stage in mangosteen research while the latter has been an established tool in breeding to improve cultivars. In this mutation breeding seeds of mangosteen were irradiated using gamma rays and the LD 50 for mangosteen was determined and noted to be very low at 10 Gy. After sowing in the seedbed, the seedlings were transplanted in polybags and observed in the nursery bed for about one year before planted in the field under old oil palm trees in Station MARDI, Kluang. After evaluation and screening, about 120 mutant mangosteen plants were selected and planted in Kluang. The plants were observed and some growth data taken. There were some mutant plants that have good growth vigour and more vigorous that the control plants. The trial are now in the fourth year and the plants are still in the juvenile stage. (Author)

  9. Penguin breeding in Edinburgh

    NARCIS (Netherlands)

    Gillespie, T.H.; F.R.S.E.,; F.Z.S.,

    1939-01-01

    The Scottish National Zoological Park at Edinburgh has been notably successful in keeping and breeding penguins. It is happy in possessing as a friend and benefactor, Mr Theodore E. Salvesen, head of the firm of Christian Salvesen & Co., Leith, to whose interest and generosity it owes the great numb

  10. Reverse breeding: a novel breeding approach based on engineered meiosis

    NARCIS (Netherlands)

    Dirks, R.; Dun, van K.P.M.; Snoo, de B.; Berg, van den M.; Lelivelt, C.L.C.; Voermans, W.; Woudenberg, L.; Wit, de J.P.C.; Reinink, K.; Schut, J.W.; Jong, de J.H.S.G.M.; Wijnker, T.G.

    2009-01-01

    Reverse breeding (RB) is a novel plant breeding technique designed to directly produce parental lines for any heterozygous plant, one of the most sought after goals in plant breeding. RB generates perfectly complementing homozygous parental lines through engineered meiosis. The method is based on re

  11. Mutation breeding in medicinal yam Dioscorea floribunda

    International Nuclear Information System (INIS)

    The effectiveness of gamma irradiation and two chemical mutagens, NMU and DES on the medicinal Yam Dioscorea floribunda was studied. Chemical mutagens were more effective in altering the mean values. DES was more effective than NMU. NMU was found to stimulate germination and seedling vigour. Although mean values were not affected by irradiation, genetic variances were considerably increased. The possibility of altering the genetic architecture of this crop through mutation breeding is suggested. (author)

  12. Mutation breeding newsletter. No. 45

    International Nuclear Information System (INIS)

    This issue of the Mutation Breeding newsletter contains 39 articles dealing with radiation induced mutations and chemical mutagenesis techniques in plant breeding programs with the aims of improving crop productivity and disease resistance as well as exploring genetic variabilities

  13. Breeding for adaptation to drought

    International Nuclear Information System (INIS)

    Full text: I will describe an approach we have used to breed improved cowpea varieties for an environment that experiences very severe droughts - the African Sahel. I will then speculate on how this approach might be enhanced for cowpea and some other C3 species by including selection for carbon stable isotope composition, i.e carbon isotope discrimination by plants (Δ). The approach in breeding for adaptation to drought involved selecting parents and then progeny with a type of grain desired by consumers and optimal time of flowering and cycle length, incorporating resistances to important diseases and pests, and yield-testing advanced lines in many locations throughout the target production zone in experiment station and farm conditions over several years. Can we now make further progress in breeding to improve adaptation to drought by including selection for Δ? The approach I recommend is to choose varieties or elite lines as parents that have differences in Δ but similar high grain quality and optimal time to flowering, cycle length and harvest index. In many cases, pre-breeding will be needed to develop appropriate elite lines and it may be difficult to develop lines that differ in Δ but also have the other necessary traits. Then crosses would be made and progeny would be selected that have the required grain quality, phenology, harvest index, and multiple resistances to pests and diseases. Selected stable lines would be screened for Δ values. Finally, selected advanced lines would be subjected to the necessary multilocation tests for yield, grain quality and other agronomic traits in the target production zone. But, should one select for Δ values that are lower or higher than those of the best current cultivars? Theory and experimental tests have shown that for C3 species, Δ is negatively correlated with intrinsic, integrated water-use efficiency. Water-use efficiency (W) is the ratio of crop biomass production to transpiration. A yield

  14. GENETICS AND GENOMICS - INTEGRATION OF MOLECULAR GENETICS INTO A BREEDING PROGRAM FOR RAINBOW TROUT

    Science.gov (United States)

    At the National Center for Cool and Cold Water Aquaculture (US Department of Agriculture, Ag. Research Service) in Leetown, WV, we have a broodstock development program now entering the 2nd generation of family based selective breeding using expected breeding values (EBVs). Our major breeding objec...

  15. Conservation priorities of Iberoamerican pig breeds and their ancestors based on microsatellite information.

    Science.gov (United States)

    Cortés, O; Martinez, A M; Cañon, J; Sevane, N; Gama, L T; Ginja, C; Landi, V; Zaragoza, P; Carolino, N; Vicente, A; Sponenberg, P; Delgado, J V

    2016-07-01

    Criollo pig breeds are descendants from pigs brought to the American continent starting with Columbus second trip in 1493. Pigs currently play a key role in social economy and community cultural identity in Latin America. The aim of this study was to establish conservation priorities among a comprehensive group of Criollo pig breeds based on a set of 24 microsatellite markers and using different criteria. Spain and Portugal pig breeds, wild boar populations of different European geographic origins and commercial pig breeds were included in the analysis as potential genetic influences in the development of Criollo pig breeds. Different methods, differing in the weight given to within- and between-breed genetic variability, were used in order to estimate the contribution of each breed to global genetic diversity. As expected, the partial contribution to total heterozygosity gave high priority to Criollo pig breeds, whereas Weitzman procedures prioritized Iberian Peninsula breeds. With the combined within- and between-breed approaches, different conservation priorities were achieved. The Core Set methodologies highly prioritized Criollo pig breeds (Cr. Boliviano, Cr. Pacifico, Cr. Cubano and Cr. Guadalupe). However, weighing the between- and within-breed components with FST and 1-FST, respectively, resulted in higher contributions of Iberian breeds. In spite of the different conservation priorities according to the methodology used, other factors in addition to genetic information also need to be considered in conservation programmes, such as the economic, cultural or historical value of the breeds involved. PMID:27025169

  16. Breeding implications resulting from classification of patellae luxation in dogs.

    Science.gov (United States)

    van Grevenhof, E M; Hazewinkel, H A W; Heuven, H C M

    2016-08-01

    Patellar luxation (PL) is one of the major hereditary orthopaedic abnormalities observed in a variety of dog breeds. When the patellae move sideways out of the trochlear groove, this is called PL. The PL score varies between dogs from normal to very severe. Reducing the prevalence of PL by breeding could prevent surgery, thereby improve welfare. Orthopaedic specialists differentiate between normal and loose patellae, where the patellae can be moved to the edge of the trochlear groove, considering scoring loose patellae as normal in the future. Loose patellae are considered acceptable for breeding so far by the breeding organization. The aim of this study was to analyse the genetic background of PL to decide on the importance of loose patellae when breeding for healthy dogs. Data are available from two dog breeds, that is Flat-coated Retrievers (n = 3808) and Kooiker dogs (n = 794), with a total of 4602 dogs. Results show that loose patellae indicate that dogs are genetically more susceptible to develop PL because family members of the dogs with loose patellae showed more severe PL. In addition, the estimated breeding values for dogs with loose patellae indicate that breeding values of dogs with loose patellae were worse than breeding values obtained for dogs with a normal score. Given these results, it is advised to orthopaedic specialists to continue to score loose patellae as a separate class and to dog breeders to minimize the use of dogs in breeding with a genetically higher susceptibility for PL. PMID:26403830

  17. Mutation breeding in peas

    International Nuclear Information System (INIS)

    The pea as an ancient crop plant still today has wide uses and is an import source of food protein. It is also an important object for genetic studies and as such has been widely used in mutation induction experiments. However, in comparison with cereals this ancient crop plant (like several other grain legumes) has gained relatively little from advances in breeding. The review focuses on the prospects of genetic improvement of pea by induced mutations, discusses principles and gives methodological information. (author)

  18. Breed differences in natriuretic peptides in healthy dogs

    DEFF Research Database (Denmark)

    Sjöstrand, K.; Wess, G.; Ljungvall, I.;

    2014-01-01

    BACKGROUND: Measurement of plasma concentration of natriuretic peptides (NPs) is suggested to be of value in diagnosis of cardiac disease in dogs, but many factors other than cardiac status may influence their concentrations. Dog breed potentially is 1 such factor. OBJECTIVE: To investigate breed...... variation in plasma concentrations of pro-atrial natriuretic peptide 31-67 (proANP 31-67) and N-terminal B-type natriuretic peptide (NT-proBNP) in healthy dogs. ANIMALS: 535 healthy, privately owned dogs of 9 breeds were examined at 5 centers as part of the European Union (EU) LUPA project. METHODS: Absence...... the median concentration in Doberman Pinschers. CONCLUSIONS AND CLINICAL IMPORTANCE: Considerable interbreed variation in plasma NP concentrations was found in healthy dogs. Intrabreed variation was large in several breeds, especially for NT-proBNP. Additional studies are needed to establish breed...

  19. Changes in sunflower breeding over the last fifty years

    Directory of Open Access Journals (Sweden)

    Vear Felicity

    2016-03-01

    Full Text Available This article discusses changes in sunflower breeding objectives since the introduction of hybrid varieties 50 years ago. After a reminder of the importance of some early programmes, Canadian in particular, the present situation for each breeding objective is compared with those encountered earlier. Breeding for yield has changed from maximum possible yield under intensive agriculture to yield with resistance to abiotic stresses, moderate droughts and shallow soils in particular, helped by collaboration with agronomists to produce crop models. Breeding for oil has changed from quantity to quality and the value of seed meal is again becoming economically important. Necessary disease resistances vary with agronomic practises and selection pressure on pathogens according to varietal genetics. The possibilities of new types of sunflower are also discussed. Advances in genomics will change breeding procedures, but with rapidly changing molecular techniques, international collaboration is particularly important.

  20. Breeding tropical forages

    Directory of Open Access Journals (Sweden)

    L Jank

    2011-01-01

    Full Text Available Brazil has the largest commercial beef cattle herd and is the main beef exporter in the world. Cultivated pastures arethe basis for the Brazilian beef production, and occupy an area of 101.4 million hectares. However, very few forage cultivars arecommercially available, and the majority of these are of apomictic reproduction, thus genetically homogeneous. Tropical foragebreeding is at its infancy, but much investment and efforts have been applied in the last three decades and some new cultivars havebeen released. In this paper, origin of different species, modes of reproduction, breeding programs and targets are discussed andthe resulting new cultivars released are presented.

  1. Feeding and Breeding Biology of Amblypharyngodon mola – A Review

    Directory of Open Access Journals (Sweden)

    Sandipan Gupta

    2014-05-01

    Full Text Available Amblypharyngodon mola is a popular food fish of Indian sub-continent due to its high nutritional value. Earlier many workers have carried out studies on feeding and breeding biology of this fish species but consolidated information on the same is not available. So, a survey of published literatures on the feeding and breeding biology of A. mola has been carried out to consolidate the available information.  Lacunae of information has been pointed out for further study mainly on age group wise variation in food preference and correlation of breeding periodicity with hydrological parameters and photoperiod.

  2. Mutation Breeding in Sugarcane

    International Nuclear Information System (INIS)

    The present position of sugar industry particularly cane sugar production in the world has been discussed. The role of African Countries which can contribute more than the present 11% to world cane sugar production is presented. The breeding methods employed in cane growing court-tries indicate the biparental crossing and selection in F1 has been the major method used to develop varieties. Due to cytogenetical peculiarities, thousands of seedlings are grown to select the desirable genotype. Mutations or sports has been a source of variation for selection in nature. Induced mutations have only enhanced the mutation rate and has enabled the plant breeders to get better variation for selection. Though many mutagens have been used gamma rays have been most effective. Induced mutations for nonflowering, spineless leaf-sheath, higher sugar content, yield md resistance to diseases like smut and downy mildew have been reported. The methods of making mutated tissues express itself have been indicated. Mutation breeding holds out promise in sugarcane in that the basic variety or genotype can be kept intact and a few characters changed as desired by the plant breeder provided proper selection methods are employed. (author)

  3. Radiation mutation breeding

    International Nuclear Information System (INIS)

    In order to develop an advanced technical knowledge for the selection of better mutants, some of the crops were irradiated and the mutation rate, the survival rate and the method for selction of a mutant were studied. Furthermore, this study aimed to obtain basic data applicable to the development of genetic resources by evaluation and analysis the specific character for selection of the superior mutant and its plant breeding. 1. selection of the mutant with a superior resistance against environment in the principal crops 1) New varieties of mutant rices such as Wonpyeongbyeo, Wongwangbyeo, Winmibyeo, and heogseon chalbeyeo (sticky forma) were registered in the national variety list and made an application to crop variety protection right. They are under review now. 2) We also keep on studying on the number of a grain of 8 lines of excellent mutant rice for the purpose of improvement of breeding . 3) We selected 3 lines which have a resistance to pod and stem blight in large soybean, 31 lines with small grain size and higher yield, 112 lines of soybean of cooking, 7 lines of low lipoxygenase content, and 12 lines with decreased phytic acid content by 20 % compared to the previous level. 2. Selection of advanced Mugunwha (Rose of Sharon) mutant 1) Bagseul, a new variety of mutant, was developed and 30 plantlets of it are being proliferated. 2) Fifty-three lines of a mutant having a various morphologies were selected

  4. Radiation mutation breeding

    Energy Technology Data Exchange (ETDEWEB)

    Song, Hi Sup; Kim, Jae Sung; Kim, Jin Kyu; Shin, In Chul; Lim, Young Taek

    1998-04-01

    In order to develop an advanced technical knowledge for the selection of better mutants, some of the crops were irradiated and the mutation rate, the survival rate and the method for selction of a mutant were studied. Furthermore, this study aimed to obtain basic data applicable to the development of genetic resources by evaluation and analysis the specific character for selection of the superior mutant and its plant breeding. 1. selection of the mutant with a superior resistance against environment in the principal crops 1) New varieties of mutant rices such as Wonpyeongbyeo, Wongwangbyeo, Winmibyeo, and heogseon chalbeyeo (sticky forma) were registered in the national variety list and made an application to crop variety protection right. They are under review now. 2) We also keep on studying on the number of a grain of 8 lines of excellent mutant rice for the purpose of improvement of breeding . 3) We selected 3 lines which have a resistance to pod and stem blight in large soybean, 31 lines with small grain size and higher yield, 112 lines of soybean of cooking, 7 lines of low lipoxygenase content, and 12 lines with decreased phytic acid content by 20 % compared to the previous level. 2. Selection of advanced Mugunwha (Rose of Sharon) mutant 1) Bagseul, a new variety of mutant, was developed and 30 plantlets of it are being proliferated. 2) Fifty-three lines of a mutant having a various morphologies were selected.

  5. Mutation breeding newsletter. No. 43

    International Nuclear Information System (INIS)

    This issue of the Newsletter includes articles dealing with radiation induced mutation based plant breeding research findings aimed at improving productivity, disease resistance and tolerance of stress conditions

  6. Captive breeding of pangolins: current status, problems and future prospects.

    Science.gov (United States)

    Hua, Liushuai; Gong, Shiping; Wang, Fumin; Li, Weiye; Ge, Yan; Li, Xiaonan; Hou, Fanghui

    2015-01-01

    Pangolins are unique placental mammals with eight species existing in the world, which have adapted to a highly specialized diet of ants and termites, and are of significance in the control of forest termite disaster. Besides their ecological value, pangolins are extremely important economic animals with the value as medicine and food. At present, illegal hunting and habitat destruction have drastically decreased the wild population of pangolins, pushing them to the edge of extinction. Captive breeding is an important way to protect these species, but because of pangolin's specialized behaviors and high dependence on natural ecosystem, there still exist many technical barriers to successful captive breeding programs. In this paper, based on the literatures and our practical experience, we reviewed the status and existing problems in captive breeding of pangolins, including four aspects, the naturalistic habitat, dietary husbandry, reproduction and disease control. Some recommendations are presented for effective captive breeding and protection of pangolins. PMID:26155072

  7. Genetic variability among native dog breeds in Turkey

    OpenAIRE

    ERDOĞAN, Metin; TEPELİ, Cafer; Brenig, Bertram; AKBULUT, Mine DOSAY; UĞUZ, Cevdet; Savolainen, Peter; ÖZBEYAZ, Ceyhan

    2013-01-01

    In this study, the genetic structures and relationships of native Turkish dog breeds were investigated using 20 polymorphic loci (17 microsatellites and 3 proteins). For this aim, a total of 141 blood samples were taken from Turkish shepherd dogs and Turkish Greyhounds located in several geographical regions of Turkey. Multilocus FST values indicated that around 1.92% of the total genetic variation could be explained by breed differences and the remaining 98.08% by differences among individua...

  8. Potato breeding in the Netherlands

    NARCIS (Netherlands)

    Haan, de H.

    1953-01-01

    A remarkable feature of potato breeding in the Netherlands is the great number of private breeders who have concentrated their efforts on the improvement of the potato. The author calls attention to some circumstances and measures that have made potato breeding attractive in the Netherlands

  9. Breeding without Mendelism: theory and practice of dairy cattle breeding in the Netherlands 1900-1950.

    Science.gov (United States)

    Theunissen, Bert

    2008-01-01

    In the 1940s and 1950s, Dutch scientists became increasingly critical of the practices of commercial dairy cattle breeders. Milk yields had hardly increased for decades, and the scientists believed this to be due to the fact that breeders still judged the hereditary potential of their animals on the basis of outward characteristics. An objective verdict on the qualities of breeding stock could only be obtained by progeny testing, the scientists contended: the best animals were those that produced the most productive offspring. Some scientists had been making this claim since the beginning of the twentieth century. Why was it that their advice was apparently not heeded by breeders for so long? And what were the methods and beliefs that guided their practices? In this paper I intend to answer these questions by analysing the practical realities of dairy farming and stock breeding in The Netherlands between 1900 and 1950. Breeders continued to employ traditional breeding methods that had proven their effectiveness since the late eighteenth century. Their methods consisted in inbreeding--breeding in 'bloodlines,' as they called it--and selection on the basis of pedigree, conformation and milk recording data. Their aims were 'purity' and 'uniformity' of type. Progeny testing was not practiced due to practical difficulties. Before World War II, scientists acknowledged that genetic theory was of little practical use to breeders of livestock. Still, hereditary theory was considered to be helpful to assess the value of the breeders' methods. For instance, striving for purity was deemed to be consistent with Mendelian theory. Yet the term purity had different connotations for scientists and practical workers. For the former, it referred to homozygosity; for the latter, it rather buttressed the constancy of a distinct commercial 'brand.' Until the 1940s, practical breeders and most scientists were agreed that selecting animals purely for production was ill-advised. Cows of

  10. Organic Plant Breeding: Achievements, Opportunities, and Challenges

    OpenAIRE

    Horneburg, Bernd

    2011-01-01

    The objective of this article is to highlight some successful approaches to organic plant breeding and to encourage the organic movement to engage in an increasing number of organic breeding and organic breeding research projects.

  11. Genetic diversity revealed by AFLP markers in Albanian goat breeds

    Directory of Open Access Journals (Sweden)

    Hoda Anila

    2012-01-01

    Full Text Available The amplified fragment length polymorphism (AFLP technique with three EcoRI/TaqI primer combinations was used in 185 unrelated individuals, representative of 6 local goat breeds of Albania, and 107 markers were generated. The mean Nei’s expected heterozygosity value for the whole population was 0.199 and the mean Shannon index was 0.249, indicating a high level of within-breed diversity. Wright’s FST index, Nei’s unbiased genetic distance and Reynolds’ genetic distance were calculated. Pairwise Fst values among the populations ranged from 0.019 to 0.047. A highly significant average FST of 0.031 was estimated, showing a low level of breed subdivision. Most of the variation is accounted for by differences among individuals. Cluster analysis based on Reynolds’ genetic distance between breeds and PCA were performed. An individual UPGMA tree based on Jaccard’s similarity index showed clusters with individuals from all goat breeds. Analysis of population structure points to a high level of admixture among breeds.

  12. RosBREED: Enabling marker-assisted breeding in Rosaceae

    NARCIS (Netherlands)

    Iezzoni, A.F.; Weebadde, C.; Luby, J.; Yue, C.; Weg, van de W.E.; Fazio, G.; Main, D.; Peace, C.P.; Bassil, N.V.; McFerson, J.

    2010-01-01

    Genomics research has not yet been translated into routine practical application in breeding Rosaceae fruit crops (peach, apple, strawberry, cherry, apricot, pear, raspberry, etc.). Through dedicated efforts of many researchers worldwide, a wealth of genomics resources has accumulated, including EST

  13. Mutation breeding by ion implantation

    Science.gov (United States)

    Yu, Zengliang; Deng, Jianguo; He, Jianjun; Huo, Yuping; Wu, Yuejin; Wang, Xuedong; Lui, Guifu

    1991-07-01

    Ion implantation as a new mutagenic method has been used in the rice breeding program since 1986, and for mutation breeding of other crops later. It has been shown, in principle and in practice, that this method has many outstanding advantages: lower damage rate; higher mutation rate and wider mutational spectrum. Many new lines of rice with higher yield rate; broader disease resistance; shorter growing period but higher quality have been bred from ion beam induced mutants. Some of these lines have been utilized for the intersubspecies hybridization. Several new lines of cotton, wheat and other crops are now in breeding. Some biophysical effects of ion implantation for crop seeds have been studied.

  14. Safflower: genetics and breeding

    International Nuclear Information System (INIS)

    A review of genetic studies related to the breeding of improved cultivars of safflower (Carthamus tinctorius L.) indicated that it was possible to modify the following over a wide range: duration of the rosette stage, stem length, branching habit, degree of spininess, head number, head size, flower morphology, mating system, seed size, hull thickness and thereby oil and protein contents, and fatty acid composition of the oil. Safflower breeders have concentrated most of their efforts on identifying and evaluating the great range of variability in cultivated safflower and its closely related wild species, and not on exploring means to increase variability. Limited experiments with gamma rays and ethyl methanesulphonate indicated that additional variability could be induced. Mutagenic agents should be used to obtain the following: resistance to foliar diseases where resistant germplasm is not available, increased levels of resistance to Phytophthora root rot, resistance to dodder and orobanche, resistance to insect pests, earlier maturity, and additional modifications in the fatty acid composition of the oil. (author)

  15. Mutation breeding in chickpea

    International Nuclear Information System (INIS)

    Chickpea is an important food legume in Turkey. Turkey is one of the most important gene centers in the world for legumes. Realizing the potential of induced mutations, a mutation breeding programme was initiated at the Nuclear Agriculture Section of the Saraykoy Nuclear Research and Training Center in 1994. The purpose of the study was to obtain high yielding chickpea mutants with large seeds, good cooking quality and high protein content. Beside this some characters such as higher adaptation ability, tolerant to cold and drought, increased machinery harvest type, higher yield, resistant to diseases especially to antracnose and pest were investigated too. Parent varieties were ILC-482, AK-7114 and AKCIN-91 had been used in these experiments. The irradiation doses were 0 (control), 50, 100, 150, 200, 250, 300, 350 and 400 Gy for field experiments, respectively. As a result of these experiments, two promising mutant lines were chosen and given to the Seed Registration and Certification Center for official registration These two promising mutants were tested at five different locations of Turkey, in 2004 and 2005 years. After 2 years of registration experiments one of outstanding mutants was officially released as mutant chickpea variety under the name TAEK-SAGEL, in 2006. Some basic characteristics of this mutant are; earliness (95-100 day), high yield capacity (180-220 kg/da), high seed protein (22-25 %), first pot height (20-25 cm), 100 seeds weight (42-48 g), cooking time (35-40 min) and resistance to Ascochyta blight.

  16. Plant breeding and genetics newsletter. No. 7

    International Nuclear Information System (INIS)

    This year seems to be very promising for the Plant Breeding and Genetic sub-Programme. At the demand of geneticists, plant breeders, and more recently molecular geneticists for information on released mutant varieties of specific crops, the FAO/IAEA Mutant Varieties Database (MVD) was transferred to the web site and is now available through Internet under the following URL: http://www-mvd.iaea.org. The idea to collect and transfer information on crop varieties developed with the use of mutation techniques to plant breeders ws conceived at almost the same time as the establishment of the Plant Breeding and Genetics Section (PBG), Joint FAO/IAEA Division. The first classified list of induced mutant varieties was presented by Sigurbjoernsson at the Pullman Symposium, and published in 1969. Since the first issue of the MBNL (May, 1972) information on newly released mutant varieties was published at the end of each issue under the title 'List of Mutant Varieties'. The full list of 2252 mutant varieties has been published in the Mutation Breeding Review No. 12 (December 2000) to close this period of collecting data on mutant varieties. Such condensed but full information on mutant varieties should help geneticists, molecular biologists and plant breeders to asses the value of mutation techniques in germplasm enhancement, and stimulate the use of induced variation

  17. Mutation breeding newsletter. No. 12

    International Nuclear Information System (INIS)

    This issue of the Newsletter presents new reports on mutation breeding programs using radiation or chemical mutagenesis to improve productivity, introduce disease resistance or induce morphological changes in crop plants

  18. Mutation breeding newsletter. No. 4

    International Nuclear Information System (INIS)

    This issue of the Newsletter presents reports and rea search abstracts on mutation breeding programs using radiation or chemical mutagenesis to improve productivity, introduce disease resistance or induce morphological changes in crop plants

  19. Mutation breeding newsletter. No. 3

    International Nuclear Information System (INIS)

    This issue of the Newsletter presents reports and rea search abstracts on mutation breeding programs using radiation or chemical mutagenesis to improve productivity, introduce disease resistance or induce morphological changes in crop plants

  20. Mutation breeding newsletter. No. 11

    International Nuclear Information System (INIS)

    This issue of the Newsletter presents new reports on mutation breeding programs using radiation or chemical mutagenesis to improve productivity, introduce disease resistance or induce morphological changes in crop plants

  1. Mutation breeding newsletter. No. 23

    International Nuclear Information System (INIS)

    This issue of the Newsletter presents new reports on mutation breeding programs using radiation or chemical mutagenesis to improve productivity, introduce disease resistance or induce morphological changes in crop plants

  2. Mutation breeding newsletter. No. 30

    International Nuclear Information System (INIS)

    This issue of the Newsletter presents new reports on mutation breeding programs using radiation or chemical mutagenesis to improve productivity, introduce disease resistance or induce morphological changes in crop plants

  3. Tricolored Blackbird - Breeding [ds20

    Data.gov (United States)

    California Department of Resources — These data come from observations of breeding tricolored blackbirds throughout their range in California. NAD27 coordinates are given in the data for each record....

  4. Mutation breeding newsletter. No. 29

    International Nuclear Information System (INIS)

    This issue of the Newsletter presents reports and rea search abstracts on mutation breeding programs using radiation or chemical mutagenesis to improve productivity, introduce disease resistance or induce morphological changes in crop plants

  5. Mutation breeding newsletter. No. 26

    International Nuclear Information System (INIS)

    This issue of the Newsletter presents reports and research abstracts on mutation breeding programs using radiation or chemical mutagenesis to improve productivity, introduce disease resistance or induce morphological changes in crop plants

  6. Mutation breeding newsletter. No. 2

    International Nuclear Information System (INIS)

    This issue of the Newsletter presents reports and rea search abstracts on mutation breeding programs using radiation or chemical mutagenesis to improve productivity, introduce disease resistance or induce morphological changes in crop plants

  7. Mutation breeding newsletter. No. 8

    International Nuclear Information System (INIS)

    This issue of the Newsletter presents new reports on mutation breeding programs using radiation or chemical mutagenesis to improve productivity, introduce disease resistance or induce morphological changes in crop plants

  8. Mutation breeding newsletter. No. 16

    International Nuclear Information System (INIS)

    This issue of the Newsletter presents new reports on mutation breeding programs using radiation or chemical mutagenesis to improve productivity, introduce disease resistance or induce morphological changes in crop plants

  9. Mutation breeding newsletter. No. 32

    International Nuclear Information System (INIS)

    This issue of the Newsletter presents new reports on mutation breeding programs using radiation or chemical mutagenesis to improve productivity, introduce disease resistance or induce morphological changes in crop plants

  10. Mutation breeding newsletter. No. 15

    International Nuclear Information System (INIS)

    This issue of the Newsletter presents new reports on mutation breeding programs using radiation or chemical mutagenesis to improve productivity, introduce disease resistance or induce morphological changes in crop plants

  11. Mutation Breeding Newsletter. No. 37

    International Nuclear Information System (INIS)

    This newsletter contains a brief account of FAO/IAEA meetings held in 1990 on plant breeding involving the use of induced mutations. It also features a list of commercially available plant cultivars produced by such techniques. Refs and tabs

  12. Illinois’ 2000 breeding season report

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — This report summarizes the 2000 breeding season for grassland birds in Illinois. The report begins by summarizing weather conditions throughout the season and...

  13. Mutation breeding newsletter. No. 7

    International Nuclear Information System (INIS)

    This issue of the Newsletter presents reports and rea search abstracts on mutation breeding programs using radiation or chemical mutagenesis to improve productivity, introduce disease resistance or induce morphological changes in crop plants

  14. Mutation breeding newsletter. No. 5

    International Nuclear Information System (INIS)

    This issue of the Newsletter presents reports and rea search abstracts on mutation breeding programs using radiation or chemical mutagenesis to improve productivity, introduce disease resistance or induce morphological changes in crop plants

  15. Mutation breeding newsletter. No. 28

    International Nuclear Information System (INIS)

    This issue of the Newsletter presents reports and research abstracts on mutation breeding programs using radiation or chemical mutagenesis to improve productivity, introduce disease resistance or induce morphological changes in crop plants

  16. Atlantic Flyway Breeding Waterfowl Survey

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — The Atlantic Flyway Technical Section initiated this breeding waterfowl survey in 11 northeast states ranging from New Hampshire to Virginia.

  17. Mutation breeding newsletter. No. 17

    International Nuclear Information System (INIS)

    This issue of the Newsletter presents new reports on mutation breeding programs using radiation or chemical mutagenesis to improve productivity, introduce disease resistance or induce morphological changes in crop plants

  18. Mutation breeding newsletter. No. 24

    International Nuclear Information System (INIS)

    This issue of the Newsletter presents reports and research abstracts on mutation breeding programs using radiation or chemical mutagenesis to improve productivity, introduce disease resistance or induce morphological changes in crop plants

  19. Mutation breeding newsletter. No. 10

    International Nuclear Information System (INIS)

    This issue of the Newsletter presents new reports on mutation breeding programs using radiation or chemical mutagenesis to improve productivity, introduce disease resistance or induce morphological changes in crop plants

  20. Mutation breeding newsletter. No. 9

    International Nuclear Information System (INIS)

    This issue of the Newsletter presents new reports on mutation breeding programs using radiation or chemical mutagenesis to improve productivity, introduce disease resistance or induce morphological changes in crop plants

  1. Mutation breeding newsletter. No. 14

    International Nuclear Information System (INIS)

    This issue of the Newsletter presents new reports on mutation breeding programs using radiation or chemical mutagenesis to improve productivity, introduce disease resistance or induce morphological changes in crop plants

  2. Mutation breeding newsletter. No. 25

    International Nuclear Information System (INIS)

    This issue of the Newsletter presents reports and research abstracts on mutation breeding programs using radiation or chemical mutagenesis to improve productivity, introduce disease resistance or induce morphological changes in crop plants

  3. Mutation breeding newsletter. No. 33

    International Nuclear Information System (INIS)

    This issue of the newsletter reports a number of research news and research abstracts on application of radiation induced mutation techniques to increase mutagenesis and mutation frequency in plant breeding projects

  4. Mutation breeding newsletter. No. 27

    International Nuclear Information System (INIS)

    This issue of the Newsletter presents reports and research abstracts on mutation breeding programs using radiation or chemical mutagenesis to improve productivity, introduce disease resistance or induce morphological changes in crop plants

  5. Mutation breeding newsletter. No. 22

    International Nuclear Information System (INIS)

    This issue of the Newsletter presents new reports on mutation breeding programs using radiation or chemical mutagenesis to improve productivity, introduce disease resistance or induce morphological changes in crop plants

  6. Mutation breeding newsletter. No. 13

    International Nuclear Information System (INIS)

    This issue of the Newsletter presents new reports on mutation breeding programs using radiation or chemical mutagenesis to improve productivity, introduce disease resistance or induce morphological changes in crop plants

  7. Mutation breeding newsletter. No. 18

    International Nuclear Information System (INIS)

    This issue of the Newsletter presents new reports on mutation breeding programs using radiation or chemical mutagenesis to improve productivity, introduce disease resistance or induce morphological changes in crop plants

  8. Mutation breeding newsletter. No. 31

    International Nuclear Information System (INIS)

    This issue of the Newsletter presents new reports on mutation breeding programs using radiation or chemical mutagenesis to improve productivity, introduce disease resistance or induce morphological changes in crop plants

  9. Mutation breeding newsletter. No. 36

    International Nuclear Information System (INIS)

    This issue of the Newsletter presents abstracts and short communications of research results on radiation and chemical induced mutation breeding projects. Positive traits such as disease resistance and increased productivity are highlighted

  10. Mutation breeding newsletter. No. 19

    International Nuclear Information System (INIS)

    This issue of the Newsletter presents new reports on mutation breeding programs using radiation or chemical mutagenesis to improve productivity, introduce disease resistance or induce morphological changes in crop plants

  11. Mutation breeding newsletter. No. 34

    International Nuclear Information System (INIS)

    This issue of the Newsletter presents abstracts and short communications of research results on radiation and chemical induced mutation breeding projects. Positive traits such as disease resistance and increased productivity are highlighted

  12. Canine Hip Dysplasia: Breed Effects

    OpenAIRE

    Martin, S W; Kirby, K.; Pennock, P W

    1980-01-01

    This paper is a refinement of previous studies in that only suitably radiographed dogs were included in the data base. The rate of hip dysplasia varied widely by breed from five percent in siberian huskies to eighty-three percent in english bulldogs. There was a significant difference in the prevalence of dysplasia within at least two breeds; golden retrievers and old english sheepdogs. Physical size per se did not appear to be an important determinant of hip dysplasia.

  13. Mutations induced in plant breeding

    Energy Technology Data Exchange (ETDEWEB)

    Barriga B, P. (Universidad Austral de Chile, Valdivia. Inst. de Produccion y Sanidad Vegetal)

    1984-10-01

    The most significant aspects of the use of ionizing radiations in plant breeding are reviewed. Aspects such as basic principles of mutation, expression and selection in obtention of mutants, methods for using induced mutations and sucess achieved with this methodology in plant breeding are reviewed. Results obtained in a program of induced mutation on wheat for high content of protein and lysine at the Universidad Austral de Chile are presented.

  14. Marker-assisted selection in fish and shellfish breeding schemes

    International Nuclear Information System (INIS)

    The main goals of breeding programmes for fish and shellfish are to increase the profitability and sustainability of aquaculture. Traditionally, these have been carried out successfully using pedigree information by selecting individuals based on breeding values predicted for traits measured on candidates using an 'animal model'. This methodology assumes that phenotypes are explained by a large number of genes with small effects and random environmental deviations. However, information on individual genes with medium or large effects cannot be used in this manner. In selective breeding programmes using pedigree information, molecular markers have been used primarily for parentage assignment when tagging individual fish is difficult and to avoid causing common environmental effects from rearing families in separate tanks. The use of these techniques in such conventional breeding programmes is discussed in detail. Exploiting the great biological diversity of many fish and shellfish species, different experimental designs may use either chromosomal manipulations or large family sizes to increase the likelihood of finding the loci affecting quantitative traits, the so-called QTL, by screening the segregation of molecular markers. Using information on identified loci in breeding schemes in aquaculture is expected to be cost-effective compared with traditional breeding methods only when the accuracy of predicting breeding values is rather low, e.g. for traits with low heritability such as disease resistance or carcass quality. One of the problems facing aquaculture is that some of the resources required to locate QTL accurately, such as dense linkage maps, are not yet available for the many species. Recently, however, information from expressed sequence tag (EST) databases has been used for developing molecular markers such as microsatellites and single nucleotide polymorphisms (SNPs). Marker-assisted selection (MAS) or genome-wide marker-assisted selection (G-MAS) using

  15. Veal fatty acid composition of different breeds

    Directory of Open Access Journals (Sweden)

    Ivica Kos

    2010-01-01

    Full Text Available Veal fatty acid composition in M. Longissimus thoracis was investigated in different calf breeds (Simmental, Holstein, Simmental x Holstein. Calves were reared on the same farm under identical feeding and handling conditions. Simmental calves had higher polyunsaturated fatty acid (PUFA but lower saturated fatty acid (SFA and monounsaturated fatty acid (MUFA values than Holstein and crossbreed calves (P<0,05. The PUFA/SFA ratio was the highest in Simmental calves and the lowest in Holstein calves. Simmental calves also had the highest n-6/n-3 ratio while the crossbreed calves had the lowest n-6/n-3 ratio.

  16. Charge breeding simulations for radioactive ion beam production

    International Nuclear Information System (INIS)

    The charge breeding technique is used for radioactive ion beam (RIB) production in order of optimizing the re-acceleration of the radioactive element ions produced by a primary beam in a thick target. Charge breeding is achieved by means of a device capable of increasing the ion charge state from 1+ to a desired value n+. In order to get high intensity RIB, experiments with charge breeding of very high efficiency could be required. To reach this goal, the charge breeding simulation could help to optimize the high charge state production efficiency by finding more proper parameters for the radioactive 1+ ions. In this paper a device based on an electron beam ion source (EBIS) is considered. In order to study that problem, a code already developed for studying the ion selective containment in an EBIS with RF quadrupoles, BRICTEST, has been modified to simulate the ion charge state breeding rate for different 1+ ion injection conditions. Particularly, the charge breeding simulations for an EBIS with a hollow electron beam have been studied.

  17. Morphological and milkability breed differences of dairy cows

    Directory of Open Access Journals (Sweden)

    Tina Bobić

    2014-05-01

    Full Text Available Anatomical characteristics of dairy cattle are not equal for all breeds, meaning that the morphological traits of udder and teats could favor an individual performance or a determined breed. Changes in teat tissue after machine milking occur because of the negative influence of the vacuum and mechanical forces of the teat cup liner. Duration and performance of machine milking also depend on the udder and teat conformation and milkability traits of cows. The aim of this study was to determine the differences in morphological characteristics of Simmental and Holstein cows before and after machine milking, as well as to elaborate the differences in some of milkability traits of the cows during process of milking. A correlation (from -0.30 to 0.37 was determined between exterior and interior traits of teats and the performance of milkability traits. In both cow breeds, statistically significant difference (p<0.0001 was found between the pre- and post-milking values in all investigated traits, with exception of teat end width. Holstein cows had significantly (p<0.001 higher amount of milk per milking, maximum and average milk flow, while cows of the Simmental breed had longer milking time duration, but without statistical significance. In comparison to Holstein breed, results of internal morphological traits of teats showed that cows of Simmental breed had longer teat canals and wider teat ends for both front and rear teats. Holstein breed compared to Simmental had thinner teats wall, but wider teat cistern. If compared to pre-milking stage, differences in teat cistern width and teat wall thickness that occur after milking were more expressed in the Holstein breed than in Simmental. Simmental cows had significantly (p<0.05 longer and wider rear teats. Future research should focus on proving the differences in changes of teat tissue due to milking between different groups of cows, as depending on the milk flow. Ultrasound method of recording can be

  18. Genetic Diversity of Old Chicken Breeds Kept in Poland

    Directory of Open Access Journals (Sweden)

    Fabio Maretto

    2013-09-01

    Full Text Available The aim of this study was to compare the genetic variation of five local chicken breeds reared in Poland. Twenty-seven microsatellite markers were investigated in 138 birds belonging to five breeds: Miniature Cochin (MCO, Gold Italian (GI, Green Legged Partridge (GLP, Silver Italian (SI and White Leghorn (WL. One hundred eighty five alleles were detected in the overall population, with a mean number of 6.85 ± 3.32 alleles per locus. For the local breeds, the observed and expected heterozygosity ranged from a minimum of 0.287 to a maximum of 0.458 and from 0.397 to 0.499 for the GI and SI breeds, respectively. The overall population heterozygote deficiency was 0.430, the average Wright’s inbreeding coefficient (FIS was 0.061 and the heterozygote deficiency due to breed subdivision was 0.393. Wright’s fixation index was slightly positive for all breeds excluding MCO (FIS = -0.476 and the estimated molecular inbreeding (fij within breed ranged from 0.296 (GLP and SI to 0.361 (WL evidencing limited coancestry. Mean allelic richness, obtained with rarefaction method based on sixteen observations, was 2.12 being the WL the less variable (1.79. Tomiuk and Loeschcke’s DTL genetic distance values were used to draw a neighbornet network which separated the cluster made of MCO and GLP from the cluster of GI, WL and SI. The results arising from our microsatellites analysis represent a starting point for the valorization of these local Polish chicken breeds for monitoring and preserving their genetic variability.

  19. Development of a genetic tool for product regulation in the diverse British pig breed market

    Directory of Open Access Journals (Sweden)

    Wilkinson Samantha

    2012-11-01

    Full Text Available Abstract Background The application of DNA markers for the identification of biological samples from both human and non-human species is widespread and includes use in food authentication. In the food industry the financial incentive to substituting the true name of a food product with a higher value alternative is driving food fraud. This applies to British pork products where products derived from traditional pig breeds are of premium value. The objective of this study was to develop a genetic assay for regulatory authentication of traditional pig breed-labelled products in the porcine food industry in the United Kingdom. Results The dataset comprised of a comprehensive coverage of breed types present in Britain: 460 individuals from 7 traditional breeds, 5 commercial purebreds, 1 imported European breed and 1 imported Asian breed were genotyped using the PorcineSNP60 beadchip. Following breed-informative SNP selection, assignment power was calculated for increasing SNP panel size. A 96-plex assay created using the most informative SNPs revealed remarkably high genetic differentiation between the British pig breeds, with an average FST of 0.54 and Bayesian clustering analysis also indicated that they were distinct homogenous populations. The posterior probability of assignment of any individual of a presumed origin actually originating from that breed given an alternative breed origin was > 99.5% in 174 out of 182 contrasts, at a test value of log(LR > 0. Validation of the 96-plex assay using independent test samples of known origin was successful; a subsequent survey of market samples revealed a high level of breed label conformity. Conclusion The newly created 96-plex assay using selected markers from the PorcineSNP60 beadchip enables powerful assignment of samples to traditional breed origin and can effectively identify mislabelling, providing a highly effective tool for DNA analysis in food forensics.

  20. Integrating genomic selection into dairy cattle breeding programmes: a review.

    Science.gov (United States)

    Bouquet, A; Juga, J

    2013-05-01

    Extensive genetic progress has been achieved in dairy cattle populations on many traits of economic importance because of efficient breeding programmes. Success of these programmes has relied on progeny testing of the best young males to accurately assess their genetic merit and hence their potential for breeding. Over the last few years, the integration of dense genomic information into statistical tools used to make selection decisions, commonly referred to as genomic selection, has enabled gains in predicting accuracy of breeding values for young animals without own performance. The possibility to select animals at an early stage allows defining new breeding strategies aimed at boosting genetic progress while reducing costs. The first objective of this article was to review methods used to model and optimize breeding schemes integrating genomic selection and to discuss their relative advantages and limitations. The second objective was to summarize the main results and perspectives on the use of genomic selection in practical breeding schemes, on the basis of the example of dairy cattle populations. Two main designs of breeding programmes integrating genomic selection were studied in dairy cattle. Genomic selection can be used either for pre-selecting males to be progeny tested or for selecting males to be used as active sires in the population. The first option produces moderate genetic gains without changing the structure of breeding programmes. The second option leads to large genetic gains, up to double those of conventional schemes because of a major reduction in the mean generation interval, but it requires greater changes in breeding programme structure. The literature suggests that genomic selection becomes more attractive when it is coupled with embryo transfer technologies to further increase selection intensity on the dam-to-sire pathway. The use of genomic information also offers new opportunities to improve preservation of genetic variation. However

  1. Estimação de componentes de (covariâncias e predição de DEP's para características de crescimento pós-desmama de bovinos da raça Nelore, usando diferentes modelos estatísticos Variance components and breeding values for post weaning growth traits of Nellore cattle, from different statistical models

    Directory of Open Access Journals (Sweden)

    T.C.C. Bittencourt

    2002-06-01

    Full Text Available Foram estimados parâmetros genéticos, fenotípicos e valores genéticos de pesos padronizados aos 365 (P365 e 455 (P455 dias de idade de animais pertencentes ao programa de melhoramento genético da raça Nelore, desenvolvido pelo Departamento de Genética da USP. Quatro modelos foram utilizados para obter estimativas de parâmetros genéticos REML: o modelo 1 incluiu apenas os efeitos genético direto e residual; o 2, incluiu o efeito de ambiente permanente e os efeitos incluídos no modelo 1; o modelo 3 incluiu o efeito genético materno e os efeitos incluídos no modelo 1; o modelo 4 é o completo, com a inclusão dos efeitos genéticos direto e materno e de ambiente permanente. Para P365, as herdabilidades obtidas foram: 0,48, 0,32, 0,28 e 0,27 para os modelos 1, 2, 3 e 4, respectivamente. Para P455, os valores observados foram: 0,48, 0,38, 0,35 e 0,34 para os modelos 1, 2, 3 e 4, respectivamente. A comparação entre os modelos indicou que os efeitos maternos não foram importantes na variação do P455, mas podem ter alguma importância no peso aos 365 dias de idade.Data from the Genetic Improvement Program of the Nellore Breed of Genetic Department-USP were used to estimate genetic parameters and breeding values for weights at 365 (P365 and 455 (P455 days of age. Four animal models were used to obtain REML estimates of genetic parameters aiming to evaluate the effect of the inclusion of a random maternal genetic effect and a permanent environmental effect on variance component estimates. The model 1 included genetic and residual random effects; model 2 and model 3 were based on model 1 but included permanent environmental (2 and maternal genetic (3 effects; model 4 included genetic, maternal and permanent environmental effects. The heritability estimates for P365 were 0.48, 0.32, 0.28 and 0.27 using models 1, 2, 3 and 4, respectively. For P455, the values were 0.48, 0.38, 0.35 e 0.34 with the same models. The results suggest that

  2. Evolution, plant breeding and biodiversity

    Directory of Open Access Journals (Sweden)

    Salvatore Ceccarelli

    2011-11-01

    Full Text Available This paper deals with changes in biodiversity during the course of evolution, plant domestication and plant breeding. It shows than man has had a strong influence on the progressive decrease of biodiversity, unconscious at first and deliberate in modern times. The decrease in biodiversity in the agricultures of the North causes a severe threat to food security and is in contrasts with the conservation of biodiversity which is part of the culture of several populations in the South. The concluding section of the paper shows that man could have guided evolution in a different way and shows an example of participatory plant breeding, a type of breeding which is done in collaboration with farmers and is based on selection for specific adaptation. Even though participatory plant breeding has been practiced for only about 20 years and by relatively few groups, the effects on both biodiversity and crop production are impressive. Eventually the paper shows how participatory plant breeding can be developed into ‘evolutionary plant breeding’ to cope in a dynamic way with climate changes.

  3. MILK FATTY ACID PROFILE IN DIFFERENT BREEDS OF DAIRY CATTLE

    Directory of Open Access Journals (Sweden)

    Katarína Kirchnerová

    2015-02-01

    Full Text Available The aim of the paper was to extend the knowledge about current fatty acids (FAs profile of cow milk fat at herds of cows held in dairy farms in Slovakia. 368 milk samples were taken in total from cows of 5 different breeds, namely Holstein (H, n = 105, Red Holstein (R, n = 120, Pinzgau (P, n = 74, Slovak Pied (S, n = 61, and Braunvieh (B, n = 8. Single milk samples were analyzed for fat, protein, lactose content, minerals and fatty acid composition of milk fat using gas chromatography, where 54 FAs were identified and expressed relatively in percentage of peak areas (% and evaluated in segments in accord with their biosynthetic origine. The combination of acids C12:0, C14:0 and C16:0, as expressed in the sum HCHFA (46.86% for S and 47.35% for P, and also the value of the so-calculated. atherogenic index (2.82 for S and 3.10 for P are the lowest, and thus the most favorable for human health at the breeds S and P. Medically desirable MUFA (27.11% for the S and 25.84% for P and PUFA (3.55% for S and 3.26% for P in these breeds are represented in the highest percentage shares. We conclude that among the observed breeds of dairy cows the Pinzgau and Simental breeds showed a better value of the composition of milk fat from a health perspective.

  4. Plasma hormone levels and semen quality in male cats during non-breeding and breeding seasons.

    Science.gov (United States)

    Tsutsui, T; Onodera, F; Oba, H; Mizutani, T; Hori, T

    2009-07-01

    Female cats are known to be seasonal breeders and male cats annual breeders. Despite this, there are limited data on the influence of breeding season (BS) on hormone concentration and semen quality in the male cat. This study compared plasma concentrations of LH and testosterone (T), and semen quality during the non-breeding season (NBS) and BS in five male cats subject to natural hours of daylight but a constant environmental temperature. Plasma LH and T concentrations were higher during the BS in 2/35 and 3/5 cats, respectively, although when comparing both hormones combined, values were higher during the BS than the NBS in all cats (p hormone secretion and semen quality, during the NBS all cats were likely to have been fertile.

  5. Impact of Molecular Technologies on Faba Bean (Vicia faba L. Breeding Strategies

    Directory of Open Access Journals (Sweden)

    Tao Yang

    2012-07-01

    Full Text Available Faba bean (Vicia faba L. is a major food and feed legume because of the high nutritional value of its seeds. The main objectives of faba bean breeding are to improve yield, disease resistance, abiotic stress tolerance, seed quality and other agronomic traits. The partial cross-pollinated nature of faba bean introduces both challenges and opportunities for population development and breeding. Breeding methods that are applicable to self-pollinated crops or open-pollinated crops are not highly suitable for faba bean. However, traditional breeding methods such as recurrent mass selection have been established in faba bean and used successfully in breeding for resistance to diseases. Molecular breeding strategies that integrate the latest innovations in genetics and genomics with traditional breeding strategies have many potential applications for future faba bean cultivar development. Hence, considerable efforts have been undertaken in identifying molecular markers, enriching genetic and genomic resources using high-throughput sequencing technologies and improving genetic transformation techniques in faba bean. However, the impact of research on practical faba bean breeding and cultivar release to farmers has been limited due to disconnects between research and breeding objectives and the high costs of research and implementation. The situation with faba bean is similar to other small crops and highlights the need for coordinated, collaborative research programs that interact closely with commercially focused breeding programs to ensure that technologies are implemented effectively.

  6. Economics breeds culture

    OpenAIRE

    Patricio Garcia-Minguez; Ausias Ribo Argemi

    2014-01-01

    Several recent papers document the influence and long lasting effects of technology on preferences. Simultaneously, cultural factors are often invoked to explain heterogeneity in preferences. These two ideas suggest that culture determines the short run equilibrium values of economic variables, but, in the long run, culture changes in response to the underlying economic fundamentals. We build a model in which preferences are endogenous and the diversity in preferences (the "cultural" diversit...

  7. Emperor penguins breeding on iceshelves.

    Science.gov (United States)

    Fretwell, Peter T; Trathan, Phil N; Wienecke, Barbara; Kooyman, Gerald L

    2014-01-01

    We describe a new breeding behaviour discovered in emperor penguins; utilizing satellite and aerial-survey observations four emperor penguin breeding colonies have been recorded as existing on ice-shelves. Emperors have previously been considered as a sea-ice obligate species, with 44 of the 46 colonies located on sea-ice (the other two small colonies are on land). Of the colonies found on ice-shelves, two are newly discovered, and these have been recorded on shelves every season that they have been observed, the other two have been recorded both on ice-shelves and sea-ice in different breeding seasons. We conduct two analyses; the first using synthetic aperture radar data to assess why the largest of the four colonies, for which we have most data, locates sometimes on the shelf and sometimes on the sea-ice, and find that in years where the sea-ice forms late, the colony relocates onto the ice-shelf. The second analysis uses a number of environmental variables to test the habitat marginality of all emperor penguin breeding sites. We find that three of the four colonies reported in this study are in the most northerly, warmest conditions where sea-ice is often sub-optimal. The emperor penguin's reliance on sea-ice as a breeding platform coupled with recent concerns over changed sea-ice patterns consequent on regional warming, has led to their designation as "near threatened" in the IUCN red list. Current climate models predict that future loss of sea-ice around the Antarctic coastline will negatively impact emperor numbers; recent estimates suggest a halving of the population by 2052. The discovery of this new breeding behaviour at marginal sites could mitigate some of the consequences of sea-ice loss; potential benefits and whether these are permanent or temporary need to be considered and understood before further attempts are made to predict the population trajectory of this iconic species.

  8. Breeding monkeys for biomedical research

    Science.gov (United States)

    Bourne, G. H.; Golarzdebourne, M. N.; Keeling, M. E.

    1973-01-01

    Captive bred rhesus monkeys show much less pathology than wild born animals. The monkeys may be bred in cages or in an outdoor compound. Cage bred animals are not psychologically normal which makes then unsuited for some types of space related research. Compound breeding provides contact between mother and infant and an opportunity for the infants to play with their peers which are important requirements to help maintain their behavioral integrity. Offspring harvested after a year in the compound appear behaviorally normal and show little histopathology. Compound breeding is also an economical method for the rapid production of young animals. The colony can double its size about every two and a half years.

  9. Breeding quinoa (Chenopodium quinoa Willd.)

    DEFF Research Database (Denmark)

    Zurita-Silva, Andrés; Fuentes, Francisco; Zamora, Pablo;

    2014-01-01

    scale. In the Andes, quinoa has until recently been marginally grown by small-scale Andean farmers, leading to minor interest in the crop from urban consumers and the industry. Quinoa breeding programs were not initiated until the 1960s in the Andes, and elsewhere from the 1970s onwards. New molecular...... tools available for the existing quinoa breeding programs, which are critically examined in this review, will enable us to tackle the limitations of allotetraploidy and genetic specificities. The recent progress, together with the declaration of "The International Year of the Quinoa" by the Food...

  10. Genetic diversity and bottleneck studies in the Marwari horse breed

    Indian Academy of Sciences (India)

    A. K. Gupta; M. Chauhan; S. N. Tandon; Sonia

    2005-12-01

    Genetic diversity within the Marwari breed of horses was evaluated using 26 different microsatellite pairs with 48 DNA samples from unrelated horses. This molecular characterisation was undertaken to evaluate the problem of genetic bottlenecks also, if any, in this breed. The estimated mean (± s.e.) allelic diversity was 5.9 (± 2.24), with a total of 133 alleles. A high level of genetic variability within this breed was observed in terms of high values of mean (± s.e.) effective number of alleles (3.3 ± 1.27), observed heterozygosity (0.5306 ± 0.22), expected Levene’s heterozygosity (0.6612 ± 0.15), expected Nei’s heterozygosity (0.6535 ± 0.14), and polymorphism information content (0.6120 ± 0.03). Low values of Wright’s fixation index, $F_{\\text{IS}}$ (0.2433 ± 0.05) indicated low levels of inbreeding. This basic study indicated the existence of substantial genetic diversity in the Marwari horse population. No significant genotypic linkage disequilibrium was detected across the population, suggesting no evidence of linkage between loci. A normal ‘L’ shaped distribution of mode–shift test, non-significant heterozygote excess on the basis of different models, as revealed from Sign, Standardized differences and Wilcoxon sign rank tests as well as non-significant ratio value suggested that there was no recent bottleneck in the existing Marwari breed population, which is important information for equine breeders. This study also revealed that the Marwari breed can be differentiated from some other exotic breeds of horses on the basis of three microsatellite primers.

  11. Newsletter of the LowInputBreeds project. Issue 7. EU project LowInputBreeds - Development of integrated livestock breeding and management strategies to improve animal health, product quality and performance in European organic and ‘low input’ milk, meat and egg production

    OpenAIRE

    LowInputBreeds Consortium,

    2012-01-01

    With this newsletter we are informing you about progress in subprojects of LowInputBreeds. Our thematic article in this issue, from Alexandros Stefanakis and Nikolaos Voutzourakis, explains breeding values for selective traits of Skafiano sheep. We would particularly like to draw your attention to the third Symposium of the LowInputBreeds project, which will take place in Nantes, France, from the 26th to the 30th of August 2013. LowInputBreeds will manage a session ”Breeding and Managem...

  12. Feeding and Breeding Biology of Amblypharyngodon mola – A Review

    OpenAIRE

    Sandipan Gupta; , Samir Banerjee

    2014-01-01

    Amblypharyngodon mola is a popular food fish of Indian sub-continent due to its high nutritional value. Earlier many workers have carried out studies on feeding and breeding biology of this fish species but consolidated information on the same is not available. So, a survey of published literatures on the feeding and breeding biology of A. mola has been carried out to consolidate the available information.  Lacunae of information has been pointed out for further study mainly on age group wise...

  13. Mutation breeding newsletter and reviews. No. 1

    International Nuclear Information System (INIS)

    Since the first issue of Mutation Breeding Newsletter (MBNL) was born in May 1972, and her sister Mutation Breeding Review (MBR) ten years later, there were 46 issues of MBNL and 13 MBR published, both MBNL and MBR, being the only specialised publications on mutation breeding worldwide. Our contributors and readers have enthusiastically supported them. During the past half century, mutation induction has matured from a focal research area to sophisticated technologies in modern plant improvement. Doubtlessly, these two publications played unique and important roles in fostering the development and application of mutation techniques in plant research, germplasm innovation, and new variety development. We are indebted to our predecessors at Plant Breeding and Genetics Section, and especially to Dr Alexander Micke, to have born and raised these publications and fostered their spread. In 1998, a new newsletter, Plant Breeding and Genetic Newsletter (PBGN), became a regular bulletin, covering all activities in our Section. Therefore, a major function of the MBNL was largely replaced by PBGN. On the other hand, the FAO/IAEA Mutant Variety Database (http://www-mvd.iaea.org/MVD/default.htm) has also taken over some functions of these two publications. Because of this and other reasons, we are facing a dwindling number of suitable submissions from outside for these two periodicals, and MBNL and MBR have become irregular publications since 2001. Even though, we, as well as many of you, contributors and readers, still believe that these two publications have reason to exist, but to keep them alive, significant evolution is inevitable. During the recent decade, mutation techniques are no longer used only as a tool for crop improvement of traditional traits, e.g. yield, resistance to disease and pests, but more frequently for diversified uses of crop end-products, enhancing quality and nutritional values and tolerances to abiotic stresses. Thanks to the massive progress in

  14. Qualification status and estimation of breeding value in French trotters

    NARCIS (Netherlands)

    Langlois, B.; Vrijenhoek, T.

    2004-01-01

    The objective of this study was to review the current selection model for French trotters. Data were obtained from the French central registration system for horses—and contained records of performance at the age of 2 through 6 of 183,955 trotters born between 1975 and 1994, and 46,629 of their moth

  15. Genomic prediction of breeding values using previously estimated SNP variances

    NARCIS (Netherlands)

    Calus, M.P.L.; Schrooten, C.; Veerkamp, R.F.

    2014-01-01

    Background Genomic prediction requires estimation of variances of effects of single nucleotide polymorphisms (SNPs), which is computationally demanding, and uses these variances for prediction. We have developed models with separate estimation of SNP variances, which can be applied infrequently, and

  16. Switching hemispheres: a new migration strategy for the disjunct Argentinean breeding population of Barn Swallow (Hirundo rustica.

    Directory of Open Access Journals (Sweden)

    Belen Garcia-Perez

    Full Text Available BACKGROUND: Barn Swallows (Hirundo rustica breed almost exclusively in the Northern Hemisphere. However, since the early 1980's, a small disjunct breeding population has become established in eastern Argentina, presumably by birds previously derived from those breeding in North America. Currently, it is unknown where these individuals go following breeding and how they have adjusted to a reversal in phenology. Their austral wintering period corresponds to the breeding period of the northern ancestral population and so they can potentially return to these more traditional breeding sites or they may occupy other South American wintering regions left vacant by conspecifics returning to the Northern Hemisphere. PRINCIPAL FINDINGS: We used a three-isotope (δ(13C, δ(15N, δ(2H approach to investigate potential wintering areas in Central and South America of individuals breeding in Argentina. Feather isotope values differed from those expected and measured at local breeding sites in Argentina indicating molt after the austral breeding period and away from the breeding grounds. Potential molting origins were identified applying likelihood-based assignment methods to a δ(2H isoscape for South America and dichotomous prior information on the distribution of C3 and C4 vegetation types based on modeled vegetation-δ(13C values. Barn Swallows now breeding in Argentina have changed their migratory behavior but presumably use the same cues as those used by the ancestral population, molting their feathers during the austral winter, likely in north-eastern South America.

  17. TEMPERAMENT OF DIFFERENT GOAT BREEDS

    Directory of Open Access Journals (Sweden)

    SZABINA NÉMETH

    2013-07-01

    Full Text Available The authors completed temper research among Alpine (n=62, Sanental (n=54 and Selected Hungarian breeds originated from a Győr-Moson-Sopron County’s goat stock-farm. The most important aim of the sample survey was the determination of the relation between the temper and age of the three examined goat breeds.The temper estimation was fulfilled by scales-test assistance (the estimation of the animal’s behavior in a 1-5 point range standing on a scales during 30 seconds. The average age of the examined goats (n=181 was 3,17±1,79 years (Sanental: 3,74±1,94; Alpine: 2,66±1,61; Selected Hungarian : 3,21±1,69 year. The average temper of the examined species was 2,77±0,97. The smallest difference compared to the average was found in case of the Alpine breed (2,72±0,86, while the received temper result was 2,28±0,90 by the Sanental and 3,24±0,94 by the Selected Hungarian breeds.Statistically proved negative relation was found during the age and temper classes compared research (P<0,01; r=-0,379, which means, that as the age goes further so decreases the animal’s temper.

  18. Rose breeding: past, present, prospects

    NARCIS (Netherlands)

    Vries, de D.P.; Dubois, L.A.M.

    1996-01-01

    In this review the PAST, PRESENT and PROSPECT will be considered as three separate periods in the history of the breeding and development of rose cultivars. The recurring theme is the genetic variation. This theme was chosen because there is justified doubt as to sufficient genetic variation availab

  19. Breeding for Grass Seed Yield

    DEFF Research Database (Denmark)

    Boelt, Birte; Studer, Bruno

    2010-01-01

    important aspects and components affecting the seed yield potential and the agronomic and environmental aspects affecting the utilization and realization of the seed yield potential. Finally, it discusses the potential of plant breeding to sustainably improve total seed yield in fodder and amenity grasses....

  20. USDA lettuce breeding and genetics

    Science.gov (United States)

    The lettuce industry of California requires continued development of improved, adapted cultivars to meet new disease and insect problems, changes in the market, and changes in growing procedures. The USDA lettuce breeding and genetics project aims to incorporate valuable traits into crisphead, mixed...

  1. Breeding for behavioural change in farm animails

    DEFF Research Database (Denmark)

    Sandøe, Peter; D'eath, RB; Lawrence, AB;

    2009-01-01

    In farm animal breeding, behavioural traits are rarely included in selection programmes despite their potential to improve animal production and welfare. Breeding goals have been broadened beyond production traits in most farm animal species to include health and functional traits...

  2. Breeding for behavioural change in farm animals

    DEFF Research Database (Denmark)

    D'Eath, R.B.; Conington, J.; Lawrence, A.B.;

    2010-01-01

    In farm animal breeding, behavioural traits are rarely included in selection programmes despite their potential to improve animal production and welfare. Breeding goals have been broadened beyond production traits in most farm animal species to include health and functional traits...

  3. Ecological problems in horse-breeding

    OpenAIRE

    Y. V. Zachinyaew; A. A. Anischenko

    2005-01-01

    In the article is represented general information devoted to environmental problems in the horse- breeding. The concept of development of ecological explorations in the horse-breeding is considered as well.

  4. Plant breeding and genetics newsletter. No. 2

    International Nuclear Information System (INIS)

    This is the second issue of the Plant Breeding and Genetics Newsletter. The Newsletter will inform you about current activities of the FAO/IAEA sub-programme on plant breeding and genetics which is implemented by the Plant Breeding and Genetics Section of the Joint FAO/IAEA Division of Nuclear Techniques in Food and Agriculture (Vienna) in close collaboration with the Plant Breeding Unit of the FAO/IAEA Agriculture and Biotechnology Laboratory (Seibersdorf)

  5. Selective Breeding in Organic Dairy Production

    OpenAIRE

    Nauta, W.J.

    2009-01-01

    Organic dairy farming started to take off in the early 1990s, when the European Union laid down organic standards for animal production. Until now, however, only incidental steps have been taken towards organic breeding and organic farmers mainly use breeding stock from conventional breeding programmes. This thesis focuses on the possibilities for breeding in organic dairy farming. This thesis starts with describing the basic backgrounds of organic dairy farming and the results of a study ...

  6. Plant breeding and genetics newsletter. No. 1

    International Nuclear Information System (INIS)

    This is the first issue of the Plant Breeding and Genetics Newsletter. The Newsletter will inform you about current activities of the FAO/IAEA sub-programme on plant breeding and genetics which is implemented by the Plant Breeding and Genetics Section of the Joint FAO/IAEA Division of Nuclear Techniques in Food and Agriculture (Vienna) in close collaboration with the Plant Breeding Unit of the FAO/IAEA Agriculture and Biotechnology Laboratory (Seibersdorf)

  7. ESTIMATIVAS DE PARÂMETROS GENÉTICOS E PREDIÇÃO DE VALORES GENOTÍPICOS NO MELHORAMENTO DO CAFEEIRO PELO PROCEDIMENTO REML/BLUP ESTIMATION OF GENETIC PARAMETERS AND PREDICTION OF GENOTYPIC VALUES IN COFFEE BREEDING BY THE REML/BLUP METHOD

    Directory of Open Access Journals (Sweden)

    MARCOS DEON VILELA DE RESENDE

    2001-01-01

    Full Text Available Objetivou-se aplicar o método REML/BLUP em programas de melhoramento genético do cafeeiro, utilizando-o na estimação de parâmetros genéticos e predição de valores genotípicos para a espécie Coffea arabica. O experimento foi instalado em julho de 1998 pela Universidade Estadual Paulista (UNESP, em Selvíria (MS. As 12 cultivares selecionadas pelo Instituto Agronômico (IAC, Campinas (SP, foram avaliadas no delineamento em blocos ao acaso com quatro repetições e dez plantas por parcela. Os resultados revelaram baixa variabilidade genética entre as cultivares para os caracteres altura da planta, diâmetro do caule e número de ramos plagiotrópicos, avaliados aos 26 meses. Apenas as cultivares Catuaí Amarelo, Icatu Vermelho e Catuaí Vermelho apresentaram valores genotípicos preditos para o diâmetro do caule superiores à média geral desse caráter. A acurácia na avaliação dos valores genotípicos das cultivares para o caráter diâmetro do caule equivaleu, em média, a 76%. A adoção de uma experimentação com duas plantas por parcela e 20 repetições poderá elevar a 90% a acurácia seletiva para o caráter diâmetro do caule. O método de modelos mistos (REML/BLUP mostrou-se adequado à estimação de parâmetros genéticos e predição de valores genotípicos no melhoramento do cafeeiro, podendo ser empregado rotineiramente.The aim of this paper is to apply the REML/BLUP methodology in coffee breeding programs, using it in the parameter estimation and genotypic values prediction in a cultivar trial of Coffea arabica. A trial established in Selvíria-MS by UNESP/Campus de Ilha Solteira, was studied. The trial evaluated 12 cultivars developed by the Instituto Agronômico de Campinas in a complete block design with four replications and 10 plants per plot. The results showed a low genetic variability among cultivars for the traits height, stem diameter and number of primary branches, at age of 26 months. Only the cultivars

  8. Genetic diversity of albanian goat breeds estimated by molecular markers.

    Directory of Open Access Journals (Sweden)

    GENTIAN HYKAJ

    2014-06-01

    Full Text Available Goats are one of the most important livestock species in Albania. The aim of this study is evaluation of genetic diversity, genetic structure and genetic distances between six Albanian local goat breeds, using three set of markers: 31 microsatellite markers, AFLP markers based on three primer combinations, and 26 SNP markers. A total of 185 individuals representing six different Albanian goat breeds (Capore, Muzhake, Dukati, Liqenasi, Hasi and Mati were analyzed. All microsatellite markers were highly polymorphic. A total number of 331 alleles were observed at 30 microsatellite loci. The average observed heterozygosity was 0.673.The global heterozygosity deficit (FIT was estimated 0.11 and global breed differentiation evaluated by FST, was estimated 0.02. The AMOVA revealed that percentage of variation among populations was 2.04% and within populations was 97.96%. AFLP analysis using three primer combinations revealed 107 polymorphic markers. The FST value across all markers was 0.031, indicating that 3.1% of total genetic variation is due to breed differentiation. SNPs analysis indicated: Expected heterozygosity per locus ranged from 0.0059 to 0.526 with an average value for all loci, 0.316, while the values of observed heterozygosity (HO ranged from 0.0059 to 0.517, with an average value of 0.282. The results obtained here reflect gaot management in Albania. Based on the results of this study, we may conclude that Albanian goat breed are important reservoir of genetic diversity, have a low level of differentiation and high level of admixture.

  9. The differentiation of camel breeds based on meat measurements using discriminant analysis.

    Science.gov (United States)

    Al-Atiyat, Raed Mahmoud; Suliman, Gamal; AlSuhaibani, Entissar; El-Waziry, Ahmad; Al-Owaimer, Abdullah; Basmaeil, Saeid

    2016-06-01

    The meat productivity of camel in the tropics is still under investigation for identification of better meat breed or type. Therefore, four one-humped Saudi Arabian (SA) camel breeds, Majaheem, Maghateer, Hamrah, and Safrah were experimented in order to differentiate them from each other based on meat measurements. The measurements were biometrical meat traits measured on six intact males from each breed. The results showed higher values of the Majaheem breed than that obtained for the other breeds except few cases such dressing percentage and rib-eye area. In differentiation analysis, the most discriminating meat variables were myofibrillar protein index, meat color components (L* and a*, b*), and cooking loss. Consequently, the Safrah and the Majaheem breeds presented the largest dissimilarity as evidenced by their multivariate means. The canonical discriminant analysis allowed an additional understanding of the differentiation between breeds. Furthermore, two large clusters, one formed by Hamrah and Maghateer in one group along with Safrah. These classifications may assign each breed into one cluster considering they are better as meat producers. The Majaheem was clustered alone in another cluster that might be a result of being better as milk producers. Nevertheless, the productivity type of the camel breeds of SA needs further morphology and genetic descriptions. PMID:26922738

  10. Selection criteria in organic cattle breeding

    OpenAIRE

    Savić Mila; Dimitrijević Vladimir; Trailović Ružica; Vegara Mensur; Dimitrijević Blagoje; Bečkei Žolt; Petrujkić Branislav; Cojkić Aleksandar

    2014-01-01

    The central issue in process of organizing organic cattle breeding is the knowledge about specificities of this kind of production, good knowledge of breed characteristics (body composition, immune tolerance, expressed predisposition towards some diseases, production properties). Research centres, in collaboration with producers, have defined the essential features on which the selection programmes in organic cattle breeding are based on. Of the greatest im...

  11. Selective breeding in organic dairy production

    NARCIS (Netherlands)

    Nauta, W.J.

    2009-01-01

    Organic dairy farming started to take off in the early 1990s, when the European Union laid down organic standards for animal production. Until now, however, only incidental steps have been taken towards organic breeding and organic farmers mainly use breeding stock from conventional breeding program

  12. Grooming relationships between breeding females and adult group members in cooperatively breeding moustached tamarins (Saguinus mystax).

    Science.gov (United States)

    Löttker, Petra; Huck, Maren; Zinner, Dietmar P; Heymann, Eckhard W

    2007-10-01

    Grooming is the most common form of affiliative behavior in primates that apart from hygienic and hedonistic benefits offers important social benefits for the performing individuals. This study examined grooming behavior in a cooperatively breeding primate species, characterized by single female breeding per group, polyandrous matings, dizygotic twinning, delayed offspring dispersal, and intensive helping behavior. In this system, breeding females profit from the presence of helpers but also helpers profit from staying in a group and assisting in infant care due to the accumulation of direct and indirect fitness benefits. We examined grooming relationships of breeding females with three classes of partners (breeding males, potentially breeding males, (sub)adult non-breeding offspring) during three reproductive phases (post-partum ovarian inactivity, ovarian activity, pregnancy) in two groups of wild moustached tamarins (Saguinus mystax). We investigated whether grooming can be used to regulate group size by either "pay-for-help" or "pay-to-stay" mechanisms. Grooming of breeding females with breeding males and non-breeding offspring was more intense and more balanced than with potentially breeding males, and most grooming occurred during the breeding females' pregnancies. Grooming was skewed toward more investment by the breeding females with breeding males during the phases of ovarian activity, and with potentially breeding males during pregnancies. Our results suggest that grooming might be a mechanism used by female moustached tamarins to induce mate association with the breeding male, and to induce certain individuals to stay in the group and help with infant care.

  13. Emperor penguins breeding on iceshelves.

    Directory of Open Access Journals (Sweden)

    Peter T Fretwell

    Full Text Available We describe a new breeding behaviour discovered in emperor penguins; utilizing satellite and aerial-survey observations four emperor penguin breeding colonies have been recorded as existing on ice-shelves. Emperors have previously been considered as a sea-ice obligate species, with 44 of the 46 colonies located on sea-ice (the other two small colonies are on land. Of the colonies found on ice-shelves, two are newly discovered, and these have been recorded on shelves every season that they have been observed, the other two have been recorded both on ice-shelves and sea-ice in different breeding seasons. We conduct two analyses; the first using synthetic aperture radar data to assess why the largest of the four colonies, for which we have most data, locates sometimes on the shelf and sometimes on the sea-ice, and find that in years where the sea-ice forms late, the colony relocates onto the ice-shelf. The second analysis uses a number of environmental variables to test the habitat marginality of all emperor penguin breeding sites. We find that three of the four colonies reported in this study are in the most northerly, warmest conditions where sea-ice is often sub-optimal. The emperor penguin's reliance on sea-ice as a breeding platform coupled with recent concerns over changed sea-ice patterns consequent on regional warming, has led to their designation as "near threatened" in the IUCN red list. Current climate models predict that future loss of sea-ice around the Antarctic coastline will negatively impact emperor numbers; recent estimates suggest a halving of the population by 2052. The discovery of this new breeding behaviour at marginal sites could mitigate some of the consequences of sea-ice loss; potential benefits and whether these are permanent or temporary need to be considered and understood before further attempts are made to predict the population trajectory of this iconic species.

  14. The scurs inheritance: new insights from the French Charolais breed

    Directory of Open Access Journals (Sweden)

    Gautier Mathieu

    2009-07-01

    Full Text Available Abstract Background Polled animals are valued in cattle industry because the absence of horns has a significant economic impact. However, some cattle are neither polled nor horned but have so-called scurs on their heads, which are corneous growths loosely attached to the skull. A better understanding of the genetic determinism of the scurs phenotype would help to fine map the polled locus. To date, only one study has attempted to map the scurs locus in cattle. Here, we have investigated the inheritance of the scurs phenotype in the French Charolais breed and examined whether the previously proposed localisation of the scurs locus on bovine chromosome 19 could be confirmed or not. Results Our results indicate that the inheritance pattern of the scurs phenotype in the French Charolais breed is autosomal recessive with complete penetrance in both sexes, which is different from what is reported for other breeds. The frequency of the scurs allele (Sc reaches 69.9% in the French Charolais population. Eleven microsatellite markers on bovine chromosome 19 were genotyped in 267 offspring (33 half-sib and full-sib families. Both non-parametric and parametric linkage analyses suggest that in the French Charolais population the scurs locus may not map to the previously identified region. A new analysis of an Angus-Hereford and Hereford-Hereford pedigree published in 1978 enabled us to calculate the frequency of the Sc allele in the Hereford breed (89.4% and to study the penetrance of this allele in males heterozygous for both polled and scurs loci (40%. This led us to revise the inheritance pattern of the scurs phenotype proposed for the Hereford breed and to suggest that allele Sc is not fully but partially dominant in double heterozygous males while it is always recessive in females. Crossbreeding involving the Charolais breed and other breeds gave results similar to those reported in the Hereford breed. Conclusion Our results suggest the existence of

  15. To breed or not to breed: a seabird's response to extreme climatic events

    OpenAIRE

    Cubaynes, Sarah; Doherty, Paul F.; Schreiber, E. A.; Gimenez, Olivier

    2010-01-01

    Intermittent breeding is an important life-history strategy that has rarely been quantified in the wild and for which drivers remain unclear. It may be the result of a trade-off between survival and reproduction, with individuals skipping breeding when breeding conditions are below a certain threshold. Heterogeneity in individual quality can also lead to heterogeneity in intermittent breeding. We modelled survival, recruitment and breeding probability of the red-footed booby (Sula sula), usin...

  16. Current trends in plant breeding

    International Nuclear Information System (INIS)

    The current world population is 6 billion and it is likely to reach 7 billion in 2010 and 8 billion 2025. Sufficient food must be produced for the ever increasing human population. The available suitable land for intensive agriculture is limited. We have to produce more food from less land, pesticide, labour and water resources. Hence, increase in crop productivity are essential to feed the world in the next century. Plant breeding provides the avenue to increase the food production to feed the growing world population. Development of a cultivar involves (I) Construction of a genetic model (II) creating a gene pool (III) selection among plants and (IV) testing the selected genotypes for adaptation to the biotic and abiotic environments (Frey, 1999). This paper discusses the trends in plant breeding using the oil palm as a model. It covers (i) genetic resources (ii) physiological traits (III) exploitation of genotype x environment interaction (IV) oil palm clones, and (v) biotechnology application. (Author)

  17. Research on the Morphological Characteristics Variability of Three Horse Breeds

    Directory of Open Access Journals (Sweden)

    Marian Cătălin Prisacaru

    2012-10-01

    Full Text Available The aim of this study was the characterization of some morphological parameters of some horse population improvedwith stallion of Arab, Hucul and English thoroughbred breeds. The biological material was represented by thestallions belonging to the three breeds and the population improved with them. Measurements have been made inorder to determine the height at withers, oblique length of the trunk, cannon girth and weight. The height at witherspresented smaller dimensions at the Arab and English thoroughbred breeds and at the Hucul breed the stallions had aheight at withers of 140 cm and the improved population 143.80 cm. Oblique length of the trunk presented valuesslightly lower at the improved horses in comparison with the stallions used at mount. The English thoroughbredpresented a value of 21.50 cm of the cannon girth at the improved population in comparison with the value of 19.5cm obtained at the mount stallions. The weight has been lower at the improved populations than the one of thestallions. Most of the morphological characteristics of the improved population are close to the ones if the stallionsused at mount.

  18. Mutation breeding newsletter. No. 38

    International Nuclear Information System (INIS)

    This issue contains a number of contributions from readers describing experiments in plant breeding (the individual items are indexed separately) and a report on the 30th Gamma-Field Symposium held in Tsukuba, Japan in July 1991. Also included is a list of officially released mutant varieties of seed-propagated crops taken from the FAO/IAEA database of mutant varieties. It is planned to organize a database on available crop plant mutant variety germplasm collections. Refs, figs and tabs

  19. Mutation breeding newsletter. No. 41

    International Nuclear Information System (INIS)

    This newsletter contains short descriptions of research methods for the use of radiation to induce mutations and facilitate plant breeding. This method is used to develop species of plants that can survive in harsh climates and thus provide a food supply for humans and animals. Some of the mutants discussed include a salt tolerant barley, a disease resistant shrub, a cold tolerant chickpea, a highly productive Canavalia virosa and productive tomato. Refs, figs and tabs

  20. Charge Breeding of Radioactive Ions

    CERN Document Server

    Wenander, F J C

    2013-01-01

    Charge breeding is a technique to increase the charge state of ions, in many cases radioactive ions. The singly charged radioactive ions, produced in an isotope separator on-line facility, and extracted with a low kinetic energy of some tens of keV, are injected into a charge breeder, where the charge state is increased to Q. The transformed ions are either directed towards a dedicated experiment requiring highly charged ions, or post-accelerated to higher beam energies. In this paper the physics processes involved in the production of highly charged ions will be introduced, and the injection and extraction beam parameters of the charge breeder defined. A description of the three main charge-breeding methods is given, namely: electron stripping in gas jet or foil; external ion injection into an electron-beam ion source/trap (EBIS/T); and external ion injection into an electron cyclotron resonance ion source (ECRIS). In addition, some preparatory devices for charge breeding and practical beam delivery aspects ...

  1. SOYBEAN - MOLECULAR ASPECTS OF BREEDING

    Directory of Open Access Journals (Sweden)

    Aleksandra Sudarić

    2012-12-01

    Full Text Available The book Soybean: Molecular Aspects of Breeding focuses recent progress in our understanding of the genetics and molecular biology of soybean. This book is divided into four parts and contains 22 chapters. Part I, Molecular Biology and Biotechnology focuses advances in molecular biology and laboratory procedures that have been developed recently to manipulate DNA. Part II, Breeding for abiotic stress covers proteomics approaches form as a powerful tool for investigating the molecular mechanisms of the plant responses to various types of abiotic stresses. Part III, Breeding for biotic stress addresses issues related to application of molecular based strategies in order to increase soybean resistance to various biotic factors. Part IV, Recent Technology reviews recent technologies into the realm of soybean monitoring, processing and product use. While the information accumulated in this book is of primary interest for plant breeders, valuable insights are also offered to agronomists, molecular biologists, physiologists, plant pathologists, food scientists and students. The book is a result of efforts made by many experts from different countries (USA, Japan, Croatia, Serbia, China, Canada, Malawi, Iran, Hong Kong, Brasil, Mexico.

  2. Semen quality of Italian local pig breeds

    Directory of Open Access Journals (Sweden)

    G. Gandini

    2010-01-01

    Full Text Available From 1996 to 1999 a conservation programme was carried out within the framework of EC contract “European gene banking project for the pig genetic resources” (Ollivier et al., 2001 in the Italian local pig breeds. The aims of the program included the primary characterization of the breeds, i.e. information on the organization in charge of the breed, breeding population numbers, breed description and qualifications, and field trials on productive and reproductive performances. In this context the “Semen Bank of Italian local pig breeds” was built. A total of 30,835 straws of four Italian local pig breeds (Cinta Senese, Casertana, Mora Romagnola and Nero Siciliano, collected from 42 sires, have been stored. In this work semen quality traits, lipid composition and freezability of the four Italian local pig breeds are reported.

  3. Cholistan and Cholistani Breed of Cattle

    Directory of Open Access Journals (Sweden)

    U. Farooq, H. A. Samad*, F. Sher1, M. Asim1 and M. Arif Khan2

    2010-04-01

    Full Text Available Cholistan, once a green and prosperous land with the source of water being the ancient Hakra River, was also the cradle of great Hakra Valley Civilization. It is sprawled at an area of 26,000 Km2, located between the latitudes 27º42´and 29º45´North and longitudes 69º52´and 75º24´East. The bioclimatic system of Cholistan falls under the category of “tropical desert” with very scanty rainfall. Geomorphologically, the soils of Cholistan are a complex blend of river alluvium and Aeolin sands. Based on topography, type of soil and vegetation, this desert is divided into two geomorphic regions: the Lesser Cholistan (the Northern 7,770 Km² region and the Greater Cholistan (the Southern 18,130 Km² region. The primary source of water is rainfall which is utilized through natural depressions or man-made ponds called “Tobas” and “Dahars.” The secondary source is underground water which is brackish and salty and not fit for human/animal consumption. Two livestock production systems prevail under pastoralism in Cholistan viz. transhumanie and nomadic. Despite an uncertain, unpredictable rainfall, low humidity and extremes in temperatures, Cholistan has long been famous for raising different breeds of livestock, contributing a significant share to national milk, meat and wool output. The total livestock population estimated during 2006 was 12,09528, out of which 47% were cattle. Cholistani cattle are considered to be ancestor of the Sahiwal and are a thermo-tolerant, tick-resistant breed. Preliminary data on some productive and reproductive traits of Cholistani cows maintained at Govt. Livestock Station, Jugait Peer, Bahawalpur during the period 2005 to 2009 revealed the avergae values for the productive traits i.e. lactation length, lactation yield, dry period, service period and fat percentage in milk as 165 days, 1235 liters, 155 days, 121 days and 4.8%, respectively. Similarly, the average values for reproductive traits i.e. age at

  4. Genetic diversity of eleven European pig breeds

    Directory of Open Access Journals (Sweden)

    Foulley Jean-Louis

    2000-03-01

    Full Text Available Abstract A set of eleven pig breeds originating from six European countries, and including a small sample of wild pigs, was chosen for this study of genetic diversity. Diversity was evaluated on the basis of 18 microsatellite markers typed over a total of 483 DNA samples collected. Average breed heterozygosity varied from 0.35 to 0.60. Genotypic frequencies generally agreed with Hardy-Weinberg expectations, apart from the German Landrace and Schwäbisch-Hällisches breeds, which showed significantly reduced heterozygosity. Breed differentiation was significant as shown by the high among-breed fixation index (overall FST = 0.27, and confirmed by the clustering based on the genetic distances between individuals, which grouped essentially all individuals in 11 clusters corresponding to the 11 breeds. The genetic distances between breeds were first used to construct phylogenetic trees. The trees indicated that a genetic drift model might explain the divergence of the two German breeds, but no reliable phylogeny could be inferred among the remaining breeds. The same distances were also used to measure the global diversity of the set of breeds considered, and to evaluate the marginal loss of diversity attached to each breed. In that respect, the French Basque breed appeared to be the most "unique" in the set considered. This study, which remains to be extended to a larger set of European breeds, indicates that using genetic distances between breeds of farm animals in a classical taxonomic approach may not give clear resolution, but points to their usefulness in a prospective evaluation of diversity.

  5. Strategies for use of reproductive technologies in genomic dairy cattle breeding programs

    DEFF Research Database (Denmark)

    Thomasen, Jørn Rind; Sørensen, Anders Christian

    genomic breeding values. The breeding schemes were evaluated according to genetic gain and rate of inbreeding. The relative gain by use of reproductive technologies is 11 to 84 percent points depending on the choice of other breeding scheme parameters. A large donor program with high selection intensity......A simulation study was performed for testing the effect of using reproductive technologies in a genomic dairy cattle young bull breeding scheme. The breeding scheme parameters: 1) number of donors, 2) number of progeny per donor, 3) age of the donor, 4) number of sires, and 5) reliability of...... of sires provides the highest genetic gain. A relatively higher genetic gain is obtained for higher reliability of GEBV. Extending the donor program and number of selected bulls has a major effect of reducing the rate of inbreeding without compromising genetic gain....

  6. Breeding without breeding: is a complete pedigree necessary for efficient breeding?

    Directory of Open Access Journals (Sweden)

    Yousry A El-Kassaby

    Full Text Available Complete pedigree information is a prerequisite for modern breeding and the ranking of parents and offspring for selection and deployment decisions. DNA fingerprinting and pedigree reconstruction can substitute for artificial matings, by allowing parentage delineation of naturally produced offspring. Here, we report on the efficacy of a breeding concept called "Breeding without Breeding" (BwB that circumvents artificial matings, focusing instead on a subset of randomly sampled, maternally known but paternally unknown offspring to delineate their paternal parentage. We then generate the information needed to rank those offspring and their paternal parents, using a combination of complete (full-sib: FS and incomplete (half-sib: HS analyses of the constructed pedigrees. Using a random sample of wind-pollinated offspring from 15 females (seed donors, growing in a 41-parent western larch population, BwB is evaluated and compared to two commonly used testing methods that rely on either incomplete (maternal half-sib, open-pollinated: OP or complete (FS pedigree designs. BwB produced results superior to those from the incomplete design and virtually identical to those from the complete pedigree methods. The combined use of complete and incomplete pedigree information permitted evaluating all parents, both maternal and paternal, as well as all offspring, a result that could not have been accomplished with either the OP or FS methods alone. We also discuss the optimum experimental setting, in terms of the proportion of fingerprinted offspring, the size of the assembled maternal and paternal half-sib families, the role of external gene flow, and selfing, as well as the number of parents that could be realistically tested with BwB.

  7. The Value of Value

    DEFF Research Database (Denmark)

    Sørensen, Asger

    parts of business ethics given prominence to especially one term, namely `value'. The question that interests me is the following: What does the articulation of ethics and morality in terms of values mean for ethics and morality as such. Or, to put the question in a more fashionably way: What is the...... value of value for morality and ethics?To make things a bit more precise, we can make use of the common distinction between ethics and morality, i.e. that morality is the immediate, collective and unconscious employment of morals, whereas ethics is the systematic, individual and conscious reflections of...... morals and morality.2 The main question is then, what the use of `value' as the key-term in moral discourses means to morality as such. Accepting ethics as a part of morality - since one cannot be moral without sometimes reflecting on the validity of the morality employed andexperienced - I have...

  8. Adding value(s)

    DEFF Research Database (Denmark)

    Carré, David

    2015-01-01

    Most economic inquires revolve around agents making decisions. Getting the ‘best value’, it is assumed, drives such decisions: gaining most while risking least. This assumption has been debunked by showing that people does not always choose neither maximum benefit nor less risk (Kahneman & Tversky......, 1992). In response, behavioral economics (Camerer, 1999) has shown that agents have values other than optimization underpinning their decisions. Therefore, concerns arose regarding which values are guiding the agent but not about how such values became relevant for the agent. In this presentation, I...... will explore the consequences of shifting to the latter perspective, i.e. looking for the generative framework of values. Here I argue that economic behavior should also be seen as a sense-making process, guided by values that are chosen/rejected along with fellow human beings, in specific socio...

  9. Genetic relationships between six eastern Pyrenean sheep breeds assessed using microsatellites

    Directory of Open Access Journals (Sweden)

    Ainhoa Ferrando

    2014-11-01

    Full Text Available The knowledge of the genetic composition and relationships among livestock breeds is a necessary step for the implementation of management and conservation plans. This study aims to characterise the genetic diversity and relationships among six sheep breeds of meat aptitude that are spread through the eastern Pyrenees: Tarasconnaise, Castillonnaise and Rouge du Roussillon from France, and Aranesa, Xisqueta and Ripollesa from Spain. All but Tarasconnaise are catalogued as endangered. These breeds do not share the same ancestral origin but commercial trades and gene flow between herds are known to have occurred for centuries. Additionally, two outgroup breeds were included: the Guirra, from a different geographical location, and the Lacaune, a highly selected breed of dairy aptitude. A total of 410 individuals were typed using a panel of 12 microsatellite markers. Statistical, phylogenetic and Bayesian analyses showed that eastern Pyrenean breeds retained high levels of genetic diversity and low, but significant, levels of genetic differentiation (FST = 4.1%. While outgroups were clearly differentiated from other breeds, Pyrenean breeds tended to form two clusters. The first encompassed Tarasconnaise and Aranesa, which probably descend from a common meta-population. The second tended to group the other four breeds. However, none reached high mean Q-values of membership to a discrete cluster. This is consistent with the recent past gene flow between breeds, despite different ancestral genetic origins. The genetic characterisation carried out of the eastern Pyrenean sheep populations provides useful information to support decision making on their conservation and focusing efforts and resources to more singular breeds.

  10. Edible value,medical value and research progress in exploitation and utilization of the farmed breeding Chinese gaint salamander(Andrias davidianus)%中国养殖大鲵的食用、药用价值及其开发利用研究进展

    Institute of Scientific and Technical Information of China (English)

    李莉; 王锡昌; 刘源

    2012-01-01

    综述了中国大鲵的营养品质、药用保健及开发利用研究进展,旨在为其进一步开发提供借鉴。研究表明:大鲵肌肉蛋白质氨基酸组成全面,必需氨基酸和鲜味氨基酸含量高;肌肉和尾部脂肪酸中不饱和脂肪酸含量丰富;肌肉中富含锌,软骨中富含钙;此外大鲵体内还含多种功能性成分,具有重要的药用保健价值。分析了大鲵的开发利用现状,指出其今后应以高档保健品为主要开发方向。%The nutritional quality,medical health care value and research progress in exploitation and utilization of Chinese giant salamander(Andrias davidianus)was reviewed,in order to provide references for its further developments.The results showed that:the total amino acids in muscle protein of giant salamander were comprehensive.High content of essential amino acids and umami amino acids could be found in the giant salamander.Similarly,unsaturated fatty acids present in muscle and tail of giant salamander were high in content.The muscle meat contained zinc while cartilage contained calcium;giant salamander contained a variety of functional components.In addition,it had important medicinal health care value.The current development of giant salamander was also analyzed,making its future to be based on high-end health products as main development direction.

  11. Analysis of the Genetic Diversity and Origin of Some Chinese Domestic Duck Breeds

    Institute of Scientific and Technical Information of China (English)

    ZHANG Yang; CHEN Guo-hong; CHEN Yang; ZHEN Ting; HUANG Zheng-yang; CHEN Chang-yi; LI Xin-yu; DUAN Xiu-jun; DONG Biao; XU Qi

    2014-01-01

    Twelve lfuorescence-labeled microsatellite markers were used to analyze the genetic diversity of 12 domestic duck breeds and 2 wild duck breeds to determine the relationship and origin of Chinese domestic duck breeds. Gene frequency, effective number of alleles (Ne), expected heterozygosity (He), polymorphism information contents (PIC), inbreeding coefficient in population (Fis), standard genetic distance (DS), and genetic distance (DA) were calculated by FSTAT and distance and phylogenetic analysis after the dates which were output from the Microsatellite-Toolkit software. Genetic distances between 12 domestic duck breeds and 2 wild duck breeds were analyzed by variance analysis. Unweighted pair group method with arithmetic mean (UPGMA) and phylogenetic trees used for cluster analysis were structured. The results indicated that 11 loci had medium-or high-level genetic diversity among the 12 loci, which could be efifciently used in the detection of the genetic parameters of each population. The values of He were 0.5414 to 0.7343, those of PIC proved similar, and those of Fis were 0.1101 to 0.3381 among all populations. All breeds were clustered into three groups by UPGMA phylogenetic trees. Banzui duck was clustered into a separate group. Differences of the DA were analysed by t-test. The results showed that difference in DA between the 12 domestic duck breeds and Lvtou duck and the Banzui duck were very signiifcant (P<0.01), indicating that these 12 domestic duck breeds originated from Lvtou wild duck, but not Banzui duck.

  12. Variation in meat quality characteristics between Sanga (Bos taurus africanus) and Sanga-derived cattle breeds and between Sanga and Brahman (Bos indicus).

    Science.gov (United States)

    Strydom, P E; Frylinck, L; Smith, M F

    2011-03-01

    Cattle breeds indigenous to Africa (Sanga) compare favourably to Bos indicus breeds with regard to adaptation to harsh environments. This study compared the meat quality of three Sanga breeds (Nguni, Tuli and Drakensberger), a Sanga-related breed (Bonsmara) and a B. indicus breed (Brahman) and supported these results with biochemical and histological measurements on the M. longissimus lumborum. Twelve young grain-fed steers of each breed were slaughtered and carcasses were electrically stimulated. All Sanga (and related) breeds, with the exception of the Tuli, had lower Warner-Bratzler shear force (SF) values at 2 and 21 days post mortem compared with the BR (P meat than BR, mainly due to favourable calpain-to-calpastatin ratios. Small differences in colour, drip loss and cooking properties were found among breeds (P < 0.05). PMID:22445415

  13. The influence of reactor core parameters on effective breeding coefficient Keff

    Institute of Scientific and Technical Information of China (English)

    Liu Li-Po; Liu Yi-Bao; Wang Juan; Yang Bo; Zhang Tao

    2008-01-01

    The values of effective breeding coefficient Keff in a reactor core of nuclear power plant are calculated for different values of parameters (core structure, fuel assembly component) by using the Monte Carlo method. The obtained values of Keff are compared and analysed, which can provide theoretical basis for reactor design.

  14. Plant breeding and genetics newsletter. No. 11

    International Nuclear Information System (INIS)

    Implementation of a new CRP on Physical mapping technologies for the identification and characterization of mutated genes contributing to crop quality, organization of mutant germplasm database and repository, implementation of new TC projects and activation of work on molecular characterization of Musa putative germplasm as well as sequencing of BAC clones were the major activities of our sub-Programme on Plant Breeding and Genetics during the last six months. A lot of work has been concentrated on organizing a mutant germplasm repository. The first collections of rice and linseed mutants have already arrived and their descriptions have been introduced into the mutated germplasm database. We found this activity especially important to stimulate exchange of crop germplasm among plant breeders. Similarly there is an urgent need to collect mutants of various crops as necessary material for functional genomics and germplasm enhancement. Nevertheless, many crop research institutes are initiating large-scale mutation programmes with the use of their own plant material. To help them in selecting the mutagen, doses and mutation treatment procedure, we published the third issue of Mutation Breeding Newsletter Index of No. 21-44. The Index is also available through our website http://www.iaea.org/programmes/nafa/d2/index.html. The numerous requests for issues of the Mutation Breeding Newsletter already received from various countries indicate the value of this 80-page index for plant breeders and research institutes. We were invited to present the activities, achievements and trends of our sub-Programme at two very important, international meetings: The International Conference on the Status of Plant and Animal Genome Research, known as the Plant and Animal Genome (PAG XI), and The International Congress on 'In the Wake of the Double Helix - From the Green Revolution to the Gene Revolution'. At this last meeting, an initiative was taken to organize the Crop Root Research

  15. Objetivos de seleção e valores econômicos de características de importância econômica para um sistema de produção de leite a pasto na Região Sudeste Breeding goals and economic values for pasture based milk production systems in the Southeast region of Brazil

    Directory of Open Access Journals (Sweden)

    Vera Lúcia Cardoso

    2004-04-01

    Full Text Available Como parte de um estudo para o desenvolvimento de estratégias de seleção envolvendo animais da raça Holandesa e mestiços (Holandês x Zebu na região sudeste do Brasil, foram derivados valores econômicos para volume de leite (V, produção de gordura (G e de proteína (P, idade ao primeiro parto (IPP, peso adulto (PA e vida útil no rebanho (VU, para um sistema de produção de leite a pasto com vacas mestiças (Holandês x Zebu. O manejo alimentar foi baseado no pastejo rotacionado de capim-elefante durante a estação chuvosa e suplementação volumosa de silagem de milho na época da seca. O fornecimento de concentrados foi na base de 1 kg de concentrado para 2,5 kg de leite, quando as produções individuais excediam 6 kg de leite/dia. Foram realizadas análises de sensibilidade para avaliar o impacto das mudanças no sistema de pagamento e variações no preço do leite sobre os valores econômicos das características estudadas. Foram também derivados valores econômicos considerando-se como fonte alternativa de suplementação volumosa na seca a mistura cana-de-açúcar + uréia. Os valores econômicos (US$, de acordo com o sistema de pagamento corrente para V, G, P, IPP, PA e VU, foram, respectivamente, 0,15; -0,48; -0,31; -0,11; 0,08 e 0,04. Os resultados das análises de sensibilidade são apresentados e discutidos.As part of a preliminary study on the design of a breeding program involving Holstein Friesian and crossbred cattle (Holstein x Zebu in the Southeast region of Brazil, economic values for milk volume (V, fat (F and protein (P production, age at first calving (AFC, mature body weight (MBW and herd life (HL were derived for a pasture based milk production system of crossbred cattle (Holstein x Zebu. The feeding regime was based on rotational grazing of elephantgrass during the rainy season and grazing plus maize silage during the dry season. Concentrates were fed when daily individual productions exceed 6-kg milk (1 kg

  16. Avocado breeding in Cuba. State of the art biotechnologies

    International Nuclear Information System (INIS)

    Genetic diversity studies of avocado germplasm: Genetic diversity among avocado varieties cultivated in Cuba was undertaken considering 22 agronomic and morphological traits, 12 AFLP and 16 SSR primer combinations. Using agromorphological traits, cultivars clustered within racial groups confirming the ecological classification and a catalogue was prepared. AFLP and SSR markers were useful for providing a more accurate estimate of genetic distances between the cultivars. Identification and characterization of soil-borne isolates: A collection of Phytopohthora spp. and Phytium spp. strains isolated from commercial avocado orchards was constructed. Identification and characterization of these isolates was done based on morphological, physiological and molecular markers (ITS and Lpv 3 primers pairs) differentiating both genus and confirming the usefulness of using a combined approach for an accurate identification. A first description about P. palmivora affecting avocado trees in Cuba was reported based on morphological traits, maximum temperature of growing, amplification pattern using ITS primer combinations and sequencing information of the amplified product obtained with Lpv 3 primer pairs. Radiosensitivity curves useful for breeding purposes: Radiosensitivity curves to Gamma rays were determined in 'Duke-7' and 'Hass' cultivars commonly used as rootstocks. LD50 values were calculated to be 28 and 27 Gy for each cultivar, respectively. Selection for salinity conditions using zygotic embryos: Survival curves (LD50) were calculated for 'Duke-7' (56 mM of NaCl), 'Jose Antonio' (66 mM) and 'Catalina' (148 mM). LD20 and LD10 values, useful for breeding purposes, were also determined. Breeding avocado rootstocks using biotechnologies: An in vitro propagation method for avocado breeding purposes was optimized using zygotic embryos, combined with the LD50 values for Gamma rays and LD50 values for NaCl to obtain mutant lines from rootstock 'Duke-7' with improved salt

  17. Effect of goat breed on the meat quality

    OpenAIRE

    Ivanović Snežana D.; Stojanović Zoran M.; Nešić Ksenija D.; Pisinov Boris P.; Baltić Milan Ž.; Popov-Raljić Jovanka V.; Đurić Jelena M.

    2014-01-01

    The quality of goat meat has recently become an important aspect in the marketing of goats in Serbia. The aim of this study was to compare some goat meat quality parameters of various races and to determine the differences between them. Goat breeds were Balkan goat and Serbian White goat, both female in the age of four years. Analysis of quality parameters: chemical composition (moisture, protein, total fat, ash,), pH value, fatty acids, amino acids, microe...

  18. Development Of Space Breeding In China

    Institute of Scientific and Technical Information of China (English)

    Liu Luxiang

    2009-01-01

    @@ Space breeding provides a new technical platform for Chinese agricaltural scientists to explore the mechanism of crop mutation induced during spaceflight and breeds new varieties of crops. It is important for China to develop the space breeding industry,maintain China's lead position in this field,serve agricultural production better,promote China's sustainable and healthy agricultural development,and ensure national food safety.

  19. Organic Beef Production - Sire Breed Comparison

    OpenAIRE

    Fallon, Richard; Leavy, Elaine

    2008-01-01

    The results to date, from this sire breed comparison study indicate that with the contrasting Aberdeen Angus and Charolais sire breeds that is possible to achieve animal performance data comparable to well managed conventional suckler calf to beef systems (300 kg carcass for heifers in Nov and 400 kg carcass for steers in March). Similarly the responses to sire breed type, sex and date of slaughter for the organic beef animals are biologically compatible. Organic beef is produced under organi...

  20. Possibilities for Breeding in Organic Dairy Farming

    OpenAIRE

    Nauta, Wytze

    2010-01-01

    In the organic sector there is an ongoing debate about the development of organic breeding methods. The debate revolves around two issues: 1) how the principle of naturalness in organic agriculture (that is, using natural processes wherever possible) can be reconciled with the increasing use of modern reproduction techniques in conventional breeding; and 2) whether animals produced by conventional breeding programs are actually suitable for organic agriculture or whether the organic sector it...

  1. Use of induced mutations in soybean breeding

    International Nuclear Information System (INIS)

    Artificial induction of mutation in plants is carried out using #betta#-irradiation and ethyl metanesulphonate (EMS) to expand the genetic variability of locally-grown soybean. This aspect of mutation breeding complements of conventional breeding approach undertaken by the Joint Malaysia Soybean Breeding Project group. Recovery of agronomically-important mutants such as earliness, lateness, bigger seed size and improved plant architecture were recorded. The significance of these findings is discussed. (author)

  2. Contributions to the Study of Sura de Stepa Cattle Breeds

    Directory of Open Access Journals (Sweden)

    Vasile Maciuc

    2010-10-01

    Full Text Available Sura de Stepa breed, which is on the verge of extinction, has been included in a preservation programme for animal genetic resources (H.G. nr. 822/2008, being raised in a reduced nucleus at S.C.D.C.B. – Dancu, Iasi. Researches were carried out on a number of 30 Sura de Stepa cows, focused on: milk production indicators by successive lactations, genetic determinism at the studied characters and at main lacto-proteins systems, the improvement value of breeding. The quantity of milk per normal lactation at Sură de Stepă population from S.C.D.C.B. – Dancu Iasi, has an upward evolution from 1589.64 kg in the first lactation to 2535.43 kg in the fifth lactation which is also the maximum one. First lactation represents 62.69% from maximum lactation, a value which highlighting the tardiness of Sura de Stepa breed in terms of milk production. Heritability analysis of the studied indicators show medium values for the quantity of milk and fat respectively a hereditary influence greater than h2 = 0.71% for percentage of milk fat and h2 = 0.57% for kappa–casein (K-cz from milk. Lacto-proteins systems, beta-lacto globulin (-lg, betacasein (-cz, alpha-casein S1 (S1-cz, have a low to intermediate heritability (0.19 to 0.29%.

  3. Dataset of milk whey proteins of two indigenous greek goat breeds.

    Science.gov (United States)

    Anagnostopoulos, Athanasios K; Katsafadou, Angeliki I; Pierros, Vasileios; Kontopodis, Evangelos; Fthenakis, George C; Arsenos, George; Karkabounas, Spyridon Ch; Tzora, Athina; Skoufos, Ioannis; Tsangaris, George Th

    2016-09-01

    Due to its rarity and unique biological traits, as well as its growing financial value, milk of dairy Greek small ruminants is continuously attracting interest from both the scientific community and industry. For the construction of the present dataset, cutting-edge proteomics methodologies were employed, in order to investigate and characterize, for the first time, the milk whey proteome from the two indigenous Greek goat breeds, Capra prisca and Skopelos. In total 822 protein groups were identified in milk whey of the two breeds, The present data are further discussed in the research article "Milk of Greek sheep and goat breeds; characterization by means of proteomics" [1]. PMID:27508219

  4. Dataset of milk whey proteins of two indigenous greek goat breeds.

    Science.gov (United States)

    Anagnostopoulos, Athanasios K; Katsafadou, Angeliki I; Pierros, Vasileios; Kontopodis, Evangelos; Fthenakis, George C; Arsenos, George; Karkabounas, Spyridon Ch; Tzora, Athina; Skoufos, Ioannis; Tsangaris, George Th

    2016-09-01

    Due to its rarity and unique biological traits, as well as its growing financial value, milk of dairy Greek small ruminants is continuously attracting interest from both the scientific community and industry. For the construction of the present dataset, cutting-edge proteomics methodologies were employed, in order to investigate and characterize, for the first time, the milk whey proteome from the two indigenous Greek goat breeds, Capra prisca and Skopelos. In total 822 protein groups were identified in milk whey of the two breeds, The present data are further discussed in the research article "Milk of Greek sheep and goat breeds; characterization by means of proteomics" [1].

  5. Prospects for Hybrid Breeding in Bioenergy Grasses

    DEFF Research Database (Denmark)

    Aguirre, Andrea Arias; Studer, Bruno; Frei, Ursula;

    2012-01-01

    of different hybrid breeding schemes to optimally exploit heterosis for biomass yield in perennial ryegrass (Lolium perenne L.) and switchgrass (Panicum virgatum), two perennial model grass species for bioenergy production. Starting with a careful evaluation of current population and synthetic breeding methods......, we address crucial topics to implement hybrid breeding, such as the availability and development of heterotic groups, as well as biological mechanisms for hybridization control such as self-incompatibility (SI) and male sterility (MS). Finally, we present potential hybrid breeding schemes based on SI...

  6. Genomics-assisted breeding in fruit trees.

    Science.gov (United States)

    Iwata, Hiroyoshi; Minamikawa, Mai F; Kajiya-Kanegae, Hiromi; Ishimori, Motoyuki; Hayashi, Takeshi

    2016-01-01

    Recent advancements in genomic analysis technologies have opened up new avenues to promote the efficiency of plant breeding. Novel genomics-based approaches for plant breeding and genetics research, such as genome-wide association studies (GWAS) and genomic selection (GS), are useful, especially in fruit tree breeding. The breeding of fruit trees is hindered by their long generation time, large plant size, long juvenile phase, and the necessity to wait for the physiological maturity of the plant to assess the marketable product (fruit). In this article, we describe the potential of genomics-assisted breeding, which uses these novel genomics-based approaches, to break through these barriers in conventional fruit tree breeding. We first introduce the molecular marker systems and whole-genome sequence data that are available for fruit tree breeding. Next we introduce the statistical methods for biparental linkage and quantitative trait locus (QTL) mapping as well as GWAS and GS. We then review QTL mapping, GWAS, and GS studies conducted on fruit trees. We also review novel technologies for rapid generation advancement. Finally, we note the future prospects of genomics-assisted fruit tree breeding and problems that need to be overcome in the breeding.

  7. Use of animal breeds and breeding to overcome the incidence of grass tetany: a review.

    Science.gov (United States)

    Greene, L W; Baker, J F; Hardt, P F

    1989-12-01

    British breeds of cattle are not so effective as Zebu in extracting nutrients from low-quality roughages, and these breeds differ in their nutrient metabolism and animal physiology. Breeds of cattle may differ in their requirements for Mg. Brahman cows are less susceptible to death from disease and metabolic disorders than are British breeds of cattle, whereas cows with 50% or greater dairy breeding (Holstein and Jersey) are more susceptible than British or Brahman breeds when maintained in beef production herds. Brahman or Brahman crossbred cows are less susceptible than other breeds to metabolic disorders such as grass tetany. Magnesium absorption has been shown to be greater in Brahman than in Jersey, Holstein and Hereford cows. These differences in the efficiency of Mg absorption between different breeds of cows may be due to genetic variation in the absorptive mechanisms of Mg, in feeding behavior, in gastrointestinal tract motility, in gastrointestinal tract fill or to some combination. PMID:2693421

  8. Effectiveness of a 95 SNP panel for the screening of breed label fraud in the Chinese meat market.

    Science.gov (United States)

    Rogberg-Muñoz, A; Wei, S; Ripoli, M V; Guo, B L; Carino, M H; Lirón, J P; Prando, A J; Vaca, R J A; Peral-García, P; Wei, Y M; Giovambattista, G

    2016-01-01

    Breed assignment has proved to be useful to control meat trade and protect the value of special productions. Meat-related frauds have been detected in China; therefore, 95 SNPs selected from the ISAG core panel were evaluated to develop an automated and technologically updated tool to screen breed label fraud in the Chinese meat market. A total of 271 animals from four Chinese yellow cattle (CYC) populations, six Bos taurus breeds, two Bos indicus and one composite were used. The allocation test distinguished European, Japanese and Zebu breeds, and two Chinese genetic components. It correctly allocated Japanese Black, Zebu and British breeds in 100, 90 and 89% of samples, respectively. CYC evidenced the Zebu, Holstein and Limousin introgression. The test did not detect CYC components in any of the 25 samples from Argentinean butchers. The method could be useful to certify Angus, Hereford and Japanese Black meat, but a modification in the panel would be needed to differentiate other breeds.

  9. Across Breed QTL Detection and Genomic Prediction in French and Danish Dairy Cattle Breeds

    DEFF Research Database (Denmark)

    van den Berg, Irene; Guldbrandtsen, Bernt; Hozé, C;

    Our objective was to investigate the potential benefits of using sequence data to improve across breed genomic prediction, using data from five French and Danish dairy cattle breeds. First, QTL for protein yield were detected using high density genotypes. Part of the QTL detected within breed was...

  10. The effect of paternal bull on milk fat composition of dairy cows of different breeds

    Directory of Open Access Journals (Sweden)

    Katarína Kirchnerová

    2015-05-01

    Full Text Available Intake of milk fat in human nutrition is important because of unsaturated and especially essential fatty acids (FAs, linoleic and α-linolenic acid, and conjugated linoleic acid (CLA, which is found only in meat and milk of ruminants. The objective of our study was to investigate the effect of paternal bulls on fatty acids composition in milk fat of dairy cows of different breeds. The milk samples were taken in total from 299 dairy cows from 11 dairy farms. In experiment Holstein (H, n = 105, Red Holstein (R, n = 120 and Pinzgau (P, n = 74 breeds originated from different bulls were used. Individual milk samples were analyzed for fatty acids in milk fat using gas chromatography (apparatus GC Varian 3800, Techtron, USA, using FID detector in capillary column Omegawax 530; 30 m. In the chromatography records there were identified 54 fatty acids inclusive of particular isomers. Their relative proportions were expressed in percent's (%. Among the studied breeds, the highest content of conjugated linoleic acid (CLA - 0.67%, essential FAs (EFA - 2.98%, monounsaturated FAs (MUFA - 25.84% and the lowest atherogenic index (AI - 3.10 was at breed P. Within this breed there was high variability and daughters of bull COS1 achieved significant above-average values of CLA content 1.07%, EFA 3.71%, MUFA 29.93% and under breed average AI = 2.40. The group of daughters of NOB3 was significant lower in CLA, 0.50% as compared with an average of P breed. . From the breed H bull MTY2 showed significantly higher value of 0.62% CLA, EFA 3.42%, 34.29% MUFA and lower value of AI, 1.9 as compared to H breed average. Statistically significantly lower levels of CLA 0.29% and 21.46% MUFA and higher AI 3.72 in milk fat of his daughters, bull STY3 may be considered as potential worser of these properties. At the breed R bull MOR506 showed in compar to the breed average significantly higher value of the EFA 3.80% and also the higher content of CLA 0.50% and MUFA 25

  11. Rock coasts and seabird breeding sites : a common optimization

    Science.gov (United States)

    Marie, Eveillard-Buchoux

    2014-05-01

    The North-West coasts of Europe support a lot of part of Northern hemisphere breeding seabirds. In that context, Scotland has a preponderant place and Brittany has southernmost limit of these species areas, for most of them. Outside the breeding season these species live mainly on the open sea and when they do visit the land to breed, they nest on a specific sites : almost all the time they breed on the rock coasts, often on seacliffs. This specific habitat are defines by geomorphological characteristics which offer special forms of the coast. The forms of rock coasts are originally and different because of several proprieties of geology, of lithology, of structures. Breeding seabird, occupying these sites, reveals, in a new light, the richness of these forms and the originals geographic location of the coastline : seabirds prefer nest in exposed coastline like rock caps, rocky points or islands. Seabirds and rock coasts are research topics in environmental geography since several years. However, these combination studies is a new approach in this field and enlargement in the heritage field allows supplement scientific approach. For example, it show that in most important touristic sites, environmental protection measures focused on landscape, habitat or bird, but much more rarely on rock coasts for these intrinsic values. Indeed, in Brittany or in Scotland, seabirds are often stars species in lot of coastal nature reserves, where they're considered like greater ecological heritage. We could see it in touristic promotion field : bird is everywhere, cliff is mostly kept in the dark, as well in leaflets as in speech visitor's guides - without, for example, as a part of this landscape. In all cases, combination of these two heritages is extremely rare. Yet, this current research illustrates the interest and the issue of development of this comparative approach seabirds / rock coasts for optimization of nature tourism and geotourism.

  12. 78 FR 45494 - Plant Breeding Listening Session meeting

    Science.gov (United States)

    2013-07-29

    ...; ] DEPARTMENT OF AGRICULTURE Plant Breeding Listening Session meeting ACTION: Notice of a Plant Breeding... Agriculture (USDA) announces a Plant Breeding Listening Session stakeholder meeting for all interested plant breeding and cultivar development stakeholders. DATES: The Plant Breeding Listening Session will be...

  13. A STUDY ON TROUT BREEDING IN DUZCE PROVINCE

    OpenAIRE

    Akbulut, Süleyman; KETEN, Akif

    2009-01-01

    In this study, trout breeding facilities of Duzce Province, a suitable place for trout breeding, were evaluated. As a result of this evaluation, current status, capacities, and problems of trout breeding facilities were determined. Some suggestions were provided to solve these problems and increase the capacity of trout breeding facilities. Keywords: Duzce, Trout Breeding.

  14. Rice breeding with induced mutations

    International Nuclear Information System (INIS)

    The Joint FAO/IAEA Division of Atomic Energy in Food and Agriculture decided in 1964 to organize a co-ordinated research programme on the use of induced mutations in rice breeding. The programme was organized within the framework of activities of the International Rice Commission. This is a report of the Third Co-ordination Meeting of the participants, which was held in Taipei, 5-9 June 1967. As the projects, which together make up the co-ordinated programme, are at different stages of progress, the report contains a variety of papers including completed studies, field and progress reports, and highlights of the discussions with some additional recommendations prepared by the participants. Refs, figs and tabs

  15. Defining a breeding objective for Nile tilapia that takes into account the diversity of smallholder production systems.

    Science.gov (United States)

    Omasaki, S K; van Arendonk, J A M; Kahi, A K; Komen, H

    2016-10-01

    In general, livestock and fish farming systems in developing countries tend to be highly diverse in terms of agro-ecological conditions and market orientation. There are no studies that have investigated if and how this diversity translates to varying preferences for breeding objective traits. This is particularly important for breeding programmes that are organized on a national level (e.g. government-supported nucleus breeding programmes). The aim of this study was to investigate whether Nile tilapia farmers with diverse production systems and economic constraints have different preferences for breeding objective traits. The second objective was to derive a consensus breeding goal, using weighted goal programming that could be used for a national breeding programme for Nile tilapia. A survey was conducted among 100 smallholder Nile tilapia farmers in Kenya to obtain preference values for traits of economic importance, by using multiple pairwise comparisons. Individual and group preference values were estimated using analytical hierarchy process. Low-income farmers preferred harvest weight, while medium- and high-income farmers preferred growth rate and survival. Grouping farmers according to market objective (fingerling production or fattening) showed that fingerling producers preferred growth rate and survival, while fattening farmers preferred harvest weight, height and thickness. Weighted goal programming was used to obtain consensus preference values, and these were used to derive desired gains for a breeding goal of a national breeding programme that takes into account the diversity of smallholder production systems.

  16. Defining a breeding objective for Nile tilapia that takes into account the diversity of smallholder production systems.

    Science.gov (United States)

    Omasaki, S K; van Arendonk, J A M; Kahi, A K; Komen, H

    2016-10-01

    In general, livestock and fish farming systems in developing countries tend to be highly diverse in terms of agro-ecological conditions and market orientation. There are no studies that have investigated if and how this diversity translates to varying preferences for breeding objective traits. This is particularly important for breeding programmes that are organized on a national level (e.g. government-supported nucleus breeding programmes). The aim of this study was to investigate whether Nile tilapia farmers with diverse production systems and economic constraints have different preferences for breeding objective traits. The second objective was to derive a consensus breeding goal, using weighted goal programming that could be used for a national breeding programme for Nile tilapia. A survey was conducted among 100 smallholder Nile tilapia farmers in Kenya to obtain preference values for traits of economic importance, by using multiple pairwise comparisons. Individual and group preference values were estimated using analytical hierarchy process. Low-income farmers preferred harvest weight, while medium- and high-income farmers preferred growth rate and survival. Grouping farmers according to market objective (fingerling production or fattening) showed that fingerling producers preferred growth rate and survival, while fattening farmers preferred harvest weight, height and thickness. Weighted goal programming was used to obtain consensus preference values, and these were used to derive desired gains for a breeding goal of a national breeding programme that takes into account the diversity of smallholder production systems. PMID:26996153

  17. Sugarcane Improvement Through Breeding and Biotechnology

    Science.gov (United States)

    The advancements in sugarcane breeding and the improvement of sugarcane through biotechnology have been reviewed by a team of leading sugarcane specialists from around the world. Topics covered in the breeding section include the evolution and origin of sugarcane, early history of conventional sugar...

  18. Mutation Breeding in Root and Tuber Crops

    International Nuclear Information System (INIS)

    Proceeded by a few general considerations about problems and results of mutation breeding in vegetatively propagated plants a review is given of the results of mutation breeding programs up to new in the different (tropical) root and tuber crops (cassava, sweet potato, yam, potato and others). (author)

  19. Plant Breeding: Surprisingly, Less Sex Is Better.

    Science.gov (United States)

    van Dijk, Peter J; Rigola, Diana; Schauer, Stephen E

    2016-02-01

    Introduction of apomixis, asexual reproduction through seeds, into crop species has the potential to dramatically transform plant breeding. A new study demonstrates that traits can be stably transferred between generations in newly produced apomictic lines, and heralds a breeding revolution needed to increase food production for the growing planet.

  20. Genetic diversity of 11 European pig breeds

    NARCIS (Netherlands)

    Lavall, G.; Iannuccelli, N.; Legault, C.; Milan, D.; Groenen, M.A.M.; Andersson, L.; Fredholm, M.; Geldermann, H.; Foulley, J.L.; Chevalet, C.; Ollivier, L.

    2000-01-01

    A set of eleven pig breeds originating from six European countries, and including a small sample of wild pigs, was chosen for this study of genetic diversity. Diversity was evaluated on the basis of 18 microsatellite markers typed over a total of 483 DNA samples collected. Average breed heterozygosi

  1. Selection criteria in organic cattle breeding

    Directory of Open Access Journals (Sweden)

    Savić Mila

    2014-01-01

    Full Text Available The central issue in process of organizing organic cattle breeding is the knowledge about specificities of this kind of production, good knowledge of breed characteristics (body composition, immune tolerance, expressed predisposition towards some diseases, production properties. Research centres, in collaboration with producers, have defined the essential features on which the selection programmes in organic cattle breeding are based on. Of the greatest importance for veterinary service is the fact that selection programmes in organic cattle breeding are in the first place based on giving priority to healthy animals, with strong immune system, good reproductive characteristics, which can be in production system for a long period. Additional important selective criteria is specific body resistance and adaptability of autochtonous breeds to environmental conditions. [Projekat Ministarstva nauke Republike Srbije, br. TP 31085

  2. Breed predisposition to canine gastric carcinoma

    DEFF Research Database (Denmark)

    Seim-Wikse, Tonje; Jörundsson, Einar; Nødtvedt, Ane;

    2013-01-01

    Previous research has indicated a breed predisposition to gastric carcinoma in dogs. However, results to date are inconsistent since several studies have failed to prove such a predisposition. Better knowledge of breeds at risk could facilitate early detection of gastric carcinoma in dogs. The ai...... of the study was to retrospectively investigate the proportion and possible breed predisposition to canine gastric carcinoma using the Norwegian Canine Cancer Register for calculations of proportional morbidity ratios (PMRs) for the period 1998-2009.......Previous research has indicated a breed predisposition to gastric carcinoma in dogs. However, results to date are inconsistent since several studies have failed to prove such a predisposition. Better knowledge of breeds at risk could facilitate early detection of gastric carcinoma in dogs. The aim...

  3. Evaluation of genetic diversity in Chinese indigenous chicken breeds using microsatellite markers.

    Science.gov (United States)

    Qu, Lujiang; Li, Xianyao; Xu, Guifang; Chen, Kuanwei; Yang, Hongjie; Zhang, Longchao; Wu, Guiqin; Hou, Zhuocheng; Xu, Guiyun; Yang, Ning

    2006-08-01

    China is rich in chicken genetic resources, and many indigenous breeds can be found throughout the country. Due to poor productive ability, some of them are threatened by the commercial varieties from domestic and foreign breeding companies. In a large-scale investigation into the current status of Chinese poultry genetic resources, 78 indigenous chicken breeds were surveyed and their blood samples collected. The genomes of these chickens were screened using microsatellite analysis. A total of 2740 individuals were genotyped for 27 microsatellite markers on 13 chromosomes. The number of alleles of the 27 markers ranged from 6 to 51 per locus with a mean of 18.74. Heterozygosity (H) values of the 78 chicken breeds were all more than 0.5. The average H value (0.622) and polymorphism information content (PIC, 0.573) of these breeds suggested that the Chinese indigenous chickens possessed more genetic diversity than that reported in many other countries. The fixation coefficients of subpopulations within the total population (F(ST)) for the 27 loci varied from 0.065 (LEI0166) to 0.209 (MCW0078), with a mean of 0.106. For all detected microsatellite loci, only one (LEI0194) deviated from Hardy-Weinberg equilibrium (HWE) across all the populations. As genetic drift or non-random mating can occur in small populations, breeds kept on conservation farms such a Langshan chicken generally had lower H values, while those kept on large populations within conservation regions possessed higher polymorphisms. The high genetic diversity in Chinese indigenous breeds is in agreement with great phenotypic variation of these breeds. Using Nei's genetic distance and the Neighbor-Joining method, the indigenous Chinese chickens were classified into six categories that were generally consistent with their geographic distributions. The molecular information of genetic diversity will play an important role in conservation, supervision, and utilization of the chicken resources. PMID:16989278

  4. Evaluation of genetic diversity in Chinese indigenous chicken breeds using microsatellite markers

    Institute of Scientific and Technical Information of China (English)

    QU Lujiang; YANG Ning; LI Xianyao; XU Guifang; CHEN Kuanwei; YANG Hongjie; ZHANG Longchao; WU Guiqin; HOU Zhuocheng; XU Guiyun

    2006-01-01

    China is rich in chicken genetic resources, and many indigenous breeds can be found throughout the country. Due to poor productive ability, some of them are threatened by the commercial varieties from domestic and foreign breeding companies. In a large-scale investigation into the current status of Chinese poultry genetic resources, 78 indigenous chicken breeds were surveyed and their blood samples collected. The genomes of these chickens were screened using microsatellite analysis. A total of 2740 individuals were genotyped for 27 microsatellite markers on 13 chromosomes. The number of alleles of the 27 markers ranged from 6 to 51 per locus with a mean of 18.74. Heterozygosity (H) values of the 78 chicken breeds were all more than 0.5. The average H value (0.622) and polymorphism information content (PIC, 0.573) of these breeds suggested that the Chinese indigenous chickens possessed more genetic diversity than that reported in many other countries. The fixation coefficients of subpopulations within the total population (FST) for the 27 loci varied from 0.065 (LEI0166) to 0.209 (MCW0078), with a mean of 0.106. For all detected microsatellite loci, only one (LEI0194) deviated from Hardy-Weinberg equilibrium (HWE) across all the populations. As genetic drift or non-random mating can occur in small populations, breeds kept on conservation farms such as Langshan chicken generally had lower H values, while those kept on large populations within conservation regions possessed higher polymorphisms. The high genetic diversity in Chinese indigenous breeds is in agreement with great phenotypic variation of these breeds. Using Nei's genetic distance and the Neighbor-Joining method, the indigenous Chinese chickens were classified into six categories that were generally consistent with their geographic distributions. The molecular information of genetic diversity will play an important role in conservation, supervision, and utilization of the chicken resources.

  5. Genetic structure of three Croatian horse breeds: implications for their conservation strategy

    Directory of Open Access Journals (Sweden)

    Miljenko Konjačić

    2010-01-01

    Full Text Available The genetic variability for a sample of 107 animals from three autochthonous Croatian horse breeds was estimated using 20 microsatellites. The average number of alleles per locus (6.3 and proportion of heterozygosity (0.732 indicated a moderate variability. The expected heterozygosity was similar among all breeds and ranged between 0.724 in the Posavina horse, and 0.737 in the Croatian Coldblood and Murinsulaner horse. The inbreeding coefficient FIS was low and non-significant over the three populations. The genetic differentiation among the three populations was low (FST=0.026, suggesting that only 2.6% of the total genetic variability was due to differences between the breeds, and 97% to individual differences. The results of pairwise genetic differentiation suggest that the Posavina horse and the Croatian Coldblood were the most closely related populations (FST=0.016. These results are confirmed by Nei’s genetic distances with the highest value observed between the Posavina horse and the Murinsulaner (0.082 and the lowest between the Posavina horse and the Croatian Coldblood (0.044. An assignment test correctly assigned 82% of individuals to the correct breed. Strategies for preserving the original native genes in the Croatian native horse breeds should be considered in order to prevent these breeds from becoming extinct and include them in the future breeding programmes.

  6. Blood biochemical parameters in male American mink (Neovison vison before and during the breeding season

    Directory of Open Access Journals (Sweden)

    Bogdan Lasota

    2014-05-01

    Full Text Available This study was aimed at selected blood biochemical parameters in the male American mink before (September-November and during the breeding (January-March season. Blood from 143 Black and Sapphire male mink at one year age was collected. The plasma was assayed for the concentration of glucose, total protein, cholesterol, HDL and LDL fractions, triacylglycerides (TG, and the activity of ALT and AST. Concentrations of glucose, protein, total and HDL/LDL cholesterol, and AST activity were generally slightly higher during the breeding season than during the non-breeding season, but remained within the reference range. In the case of ALT activity and TG concentration, the relations were reversed. The parameters studied in the Sapphire mink showed greater variation, both in- and out of the season. In Black and Sapphire males of the American mink, the studied parameters revealed slightly higher values during the breeding season than the non-breeding season. This will vary depending on the color variety. The decrease in TG concentration during the breeding season may indicate an increased energy demand due to ambient temperature falls, and/or may be a sign of increased energy consumption associated with physical exertion during mating. Consideration should be given to the nutrition of male mink during the breeding season.

  7. Patterns of molecular genetic variation among cat breeds.

    Science.gov (United States)

    Menotti-Raymond, Marilyn; David, Victor A; Pflueger, Solveig M; Lindblad-Toh, Kerstin; Wade, Claire M; O'Brien, Stephen J; Johnson, Warren E

    2008-01-01

    Genetic variation in cat breeds was assessed utilizing a panel of short tandem repeat (STR) loci genotyped in 38 cat breeds and 284 single-nucleotide polymorphisms (SNPs) genotyped in 24 breeds. Population structure in cat breeds generally reflects their recent ancestry and absence of strong breed barriers between some breeds. There is a wide range in the robustness of population definition, from breeds demonstrating high definition to breeds with as little as a third of their genetic variation partitioning into a single population. Utilizing the STRUCTURE algorithm, there was no clear demarcation of the number of population subdivisions; 16 breeds could not be resolved into independent populations, the consequence of outcrossing in established breeds to recently developed breeds with common ancestry. These 16 breeds were divided into 6 populations. Ninety-six percent of cats in a sample set of 1040 were correctly assigned to their classified breed or breed group/population. Average breed STR heterozygosities ranged from moderate (0.53; Havana, Korat) to high (0.85; Norwegian Forest Cat, Manx). Most of the variation in cat breeds was observed within a breed population (83.7%), versus 16.3% of the variation observed between populations. The hierarchical relationships of cat breeds is poorly defined as demonstrated by phylogenetic trees generated from both STR and SNP data, though phylogeographic grouping of breeds derived completely or in part from Southeast Asian ancestors was apparent.

  8. Genetic parameters for carcass weight, conformation and fat in five beef cattle breeds.

    Science.gov (United States)

    Kause, A; Mikkola, L; Strandén, I; Sirkko, K

    2015-01-01

    Profitability of beef production can be increased by genetically improving carcass traits. To construct breeding value evaluations for carcass traits, breed-specific genetic parameters were estimated for carcass weight, carcass conformation and carcass fat in five beef cattle breeds in Finland (Hereford, Aberdeen Angus, Simmental, Charolais and Limousin). Conformation and fat were visually scored using the EUROP carcass classification. Each breed was separately analyzed using a multitrait animal model. A total of 6879-19 539 animals per breed had phenotypes. For the five breeds, heritabilities were moderate for carcass weight (h 2=0.39 to 0.48, s.e.=0.02 to 0.04) and slightly lower for conformation (h 2=0.30 to 0.44, s.e.=0.02 to 0.04) and carcass fat (h 2=0.29 to 0.44, s.e.=0.02 to 0.04). The genetic correlation between carcass weight and conformation was favorable in all breeds (r G=0.37 to 0.53, s.e.=0.04 to 0.05), heavy carcasses being genetically more conformed. The phenotypic correlation between carcass weight and carcass fat was moderately positive in all breeds (r P=0.21 to 0.32), implying that increasing carcass weight was related to increasing fat levels. The respective genetic correlation was the strongest in Hereford (r G=0.28, s.e.=0.05) and Angus (r G=0.15, s.e.=0.05), the two small body-sized British breeds with the lowest conformation and the highest fat level. The correlation was weaker in the other breeds (r G=0.08 to 0.14). For Hereford, Angus and Simmental, more conformed carcasses were phenotypically fatter (r P=0.11 to 0.15), but the respective genetic correlations were close to zero (r G=-0.05 to 0.04). In contrast, in the two large body-sized and muscular French breeds, the genetic correlation between conformation and fat was negative and the phenotypic correlation was close to zero or negative (Charolais: r G=-0.18, s.e.=0.06, r P=0.02; Limousin: r G=-0.56, s.e.=0.04, r P=-0.13). The results indicate genetic variation for the genetic

  9. Potential benefits of genomic selection on genetic gain of small ruminant breeding programs.

    Science.gov (United States)

    Shumbusho, F; Raoul, J; Astruc, J M; Palhiere, I; Elsen, J M

    2013-08-01

    In conventional small ruminant breeding programs, only pedigree and phenotype records are used to make selection decisions but prospects of including genomic information are now under consideration. The objective of this study was to assess the potential benefits of genomic selection on the genetic gain in French sheep and goat breeding designs of today. Traditional and genomic scenarios were modeled with deterministic methods for 3 breeding programs. The models included decisional variables related to male selection candidates, progeny testing capacity, and economic weights that were optimized to maximize annual genetic gain (AGG) of i) a meat sheep breeding program that improved a meat trait of heritability (h(2)) = 0.30 and a maternal trait of h(2) = 0.09 and ii) dairy sheep and goat breeding programs that improved a milk trait of h(2) = 0.30. Values of ±0.20 of genetic correlation between meat and maternal traits were considered to study their effects on AGG. The Bulmer effect was accounted for and the results presented here are the averages of AGG after 10 generations of selection. Results showed that current traditional breeding programs provide an AGG of 0.095 genetic standard deviation (σa) for meat and 0.061 σa for maternal trait in meat breed and 0.147 σa and 0.120 σa in sheep and goat dairy breeds, respectively. By optimizing decisional variables, the AGG with traditional selection methods increased to 0.139 σa for meat and 0.096 σa for maternal traits in meat breeding programs and to 0.174 σa and 0.183 σa in dairy sheep and goat breeding programs, respectively. With a medium-sized reference population (nref) of 2,000 individuals, the best genomic scenarios gave an AGG that was 17.9% greater than with traditional selection methods with optimized values of decisional variables for combined meat and maternal traits in meat sheep, 51.7% in dairy sheep, and 26.2% in dairy goats. The superiority of genomic schemes increased with the size of the

  10. MORE ON THE APPROVAL OF ANTONINSKO-ZOZULENETSKIY CARPS OF UKRAINIAN BREEDS

    Directory of Open Access Journals (Sweden)

    O. Oleksiyenko

    2015-12-01

    back constitution and without any signs of defects and diseases were selected. An important role during the selection was also given the distinct manifestation of secondary sexual features in males and females. The high productive qualities of domestic carp contributed to their spread in the near abroad and far abroad countries as well. They were exported to Russia, Moldova, Romania, China, with the aim of pure breeding and improvement of native carp forms. Based on the analysis of long-term studies on the rearing of Antoninsko-Zozulenetskiy arrays of Ukrainian framed and scaly breeds, it was found that their fish breeding and biological indicators comply with the requirements of the Regulation on testing of selection achievements in animal breeding and can be submitted to the relevant authorities for consideration and approval as a type of inbreeding Ukrainian framed and scaly carp breeds. Originality. The analysis of fish breeding and biological indicators of Antoninsko-Zozulenetskiy carp of Ukrainian framed and Ukrainian scaly breeds serve as the basis for submission them in the status of inbreed types and approval as a selection achievement. Practical value. Growing of Antoninsko-Zozulenetskiy carps in production conditions will promote an increase in fish production in ponds and production of marketable fish.

  11. Molecular Characterization of Black Bengal and Jamuna Pari Goat Breeds By RAPD Markers

    Directory of Open Access Journals (Sweden)

    M. A. Rahman

    2006-01-01

    Full Text Available This experiment was conducted in the Genetics, Breeding and Reproductive Biotechnology Laboratory under Goat and Sheep Production Research Division, Bangladesh Livestock Research Institute (BLRI, Saver, Dhaka, Bangladesh. DNA was extracted from 14 goat breeds and the extracted DNA was observed by gel electrophoresis. Eight goat specific primers were synthesized by ASM-800 DNA synthesizer and screened in the study and all these primers were capable of priming polymorphic amplification pattern in both the breeds. Random amplification of polymorphic DNA – Polymerase Chain Reaction (RAPD-PCR analysis was carried out using DNA samples of 14 black bengal goat and Jamuna pari goat breeds. Only unambiguous, reproducible and scorable polymorphic fragments were taken into consideration for analysis. Data were analyzed by using a computer programe POPGENE (Version 1.31. Highest level of Nei's[1] gene diversity value (0.4898 was observed in BMS 1494 locus and the mean genetic diversity was obtained 0.3724 among the 14 goat breeds. The highest number of polymorphism obserbed in primer BM1818.The pair-wise genetic distance value ranged from 0.2500 to 1.000. Dendrogram based on Nei's[1] genetic distance using Unweighted Pair Group Method of Arithmetic Means (UPGMA indicated segregation of the 14 goat breeds. Within Jamuna pari goat genetic similarity is low as well as black Bengal goat.

  12. Deterministic Simulation of Alternative Breeding Objectives and Schemes for Pure Bred Cattle in Kenya

    International Nuclear Information System (INIS)

    Alternative breeding objectives and schemes for milk production were evaluated for their economic efficiency using deterministic simulation. A two-tier open nucleus breeding scheme and a young bull system (YBS) were assumed with intensive recording and 100% artificial insemination (AI) in the nucleus and 35% AI in the commercial population, which was assumed to comprise of the smallholder herds. Since most production systems are dual purpose, breeding objectives were defined, which represented different scenarios. These objectives represented the present (objective 1- dual purpose), smallholder (objective 2- dual purpose with limited mature live weight) and future production situations (objective 3- dual purpose with fat based milk price). Breeding objectives differed in the trials included and their economic values while the breeding schemes differed in records available for use as selection criteria as well as in the costs and investment parameters. since the main question for establishing a breeding and recording programme is that of efficiency of investment, the monetary genetic response and profit per cow in the population were used as evaluation criteria. All breeding objectives and schemes realized profits. The objectives and schemes that ranked highly for annual monetary genetic response and total return per cow did not rank the same in profit per cow in all cases. In objective 3, the scheme that assumed records on fat yield (FY) were available for use as selection criterion and that, which assumed no records on FY,differed very little in profit per cow (approximately 4%). Therefore, under the current production and marketing conditions, a breeding scheme that requires measuring of the fat content does not seem to be justified from an economic point of view. There is evidence that a well-organised breeding programme utilizing an open nucleus, a YBS and the smallholder farms as well as commercial population could sustain itself

  13. Genotyping cows for the reference increase reliability of genomic prediction in a small breed

    DEFF Research Database (Denmark)

    Thomasen, Jørn Rind; Sørensen, Anders Christian; Lund, Mogens Sandø;

    2013-01-01

    hybrid breeding scheme (H) with use of both genotyped young bulls and progeny tested bulls. The genomic selection schemes were simulated over 15 years, and the reference population of the first year of genomic selection consisted of approximately 1000 progeny tested bulls. T-B yielded 8.6% higher ∆G......We hypothesized that adding cows to the reference population in a breed with a small number of reference bulls would increase reliabilities of genomic breeding values and genetic gain. We tested this premise by comparing two strategies for maintaining the reference population for genetic gain......, inbreeding and reliabilities of genomic predictions: 1) Adding 60 progeny tested bulls each year (B), and 2) in addition to 60 progeny tested bulls, adding 2,000 genotyped cows per year (C). Two breeding schemes were tested: 1) A turbo scheme (T) with only genotyped young bulls used intensively, and 2) a...

  14. Dataset of milk whey proteins of three indigenous Greek sheep breeds.

    Science.gov (United States)

    Anagnostopoulos, Athanasios K; Katsafadou, Angeliki I; Pierros, Vasileios; Kontopodis, Evangelos; Fthenakis, George C; Arsenos, George; Karkabounas, Spyridon Ch; Tzora, Athina; Skoufos, Ioannis; Tsangaris, George Th

    2016-09-01

    The importance and unique biological traits, as well as the growing financial value, of milk from small Greek ruminants is continuously attracting interest from both the scientific community and industry. In this regard the construction of a reference dataset of the milk of the Greek sheep breeds is of great interest. In order to obtain such a dataset we employed cutting-edge proteomics methodologies to investigate and characterize, the proteome of milk from the three indigenous Greek sheep breeds Mpoutsko, Karagouniko and Chios. In total, more than 1300 protein groups were identified in milk whey from these breeds, reporting for the first time the most detailed proteome dataset of this precious biological material. The present results are further discussed in the research paper "Milk of Greek sheep and goat breeds; characterization by means of proteomics" (Anagnostopoulos et al. 2016) [1]. PMID:27508236

  15. Harvesting the promising fruits of genomics: applying genome sequencing technologies to crop breeding.

    Directory of Open Access Journals (Sweden)

    Rajeev K Varshney

    2014-06-01

    Full Text Available Next generation sequencing (NGS technologies are being used to generate whole genome sequences for a wide range of crop species. When combined with precise phenotyping methods, these technologies provide a powerful and rapid tool for identifying the genetic basis of agriculturally important traits and for predicting the breeding value of individuals in a plant breeding population. Here we summarize current trends and future prospects for utilizing NGS-based technologies to develop crops with improved trait performance and increase the efficiency of modern plant breeding. It is our hope that the application of NGS technologies to plant breeding will help us to meet the challenge of feeding a growing world population.

  16. Dataset of milk whey proteins of three indigenous Greek sheep breeds.

    Science.gov (United States)

    Anagnostopoulos, Athanasios K; Katsafadou, Angeliki I; Pierros, Vasileios; Kontopodis, Evangelos; Fthenakis, George C; Arsenos, George; Karkabounas, Spyridon Ch; Tzora, Athina; Skoufos, Ioannis; Tsangaris, George Th

    2016-09-01

    The importance and unique biological traits, as well as the growing financial value, of milk from small Greek ruminants is continuously attracting interest from both the scientific community and industry. In this regard the construction of a reference dataset of the milk of the Greek sheep breeds is of great interest. In order to obtain such a dataset we employed cutting-edge proteomics methodologies to investigate and characterize, the proteome of milk from the three indigenous Greek sheep breeds Mpoutsko, Karagouniko and Chios. In total, more than 1300 protein groups were identified in milk whey from these breeds, reporting for the first time the most detailed proteome dataset of this precious biological material. The present results are further discussed in the research paper "Milk of Greek sheep and goat breeds; characterization by means of proteomics" (Anagnostopoulos et al. 2016) [1].

  17. mtDNA D-loop of Chinese main indigenous sheep breeds using PCR-RFLP

    Institute of Scientific and Technical Information of China (English)

    LI Xianglong; ZHANG Zengli; GONG Yuanfang; LIU Zhengzhu; JIA Qing; WANG Lize

    2007-01-01

    The polymorphism of mitochondrial DNA (mtDNA) D-loop of 83 individuals from nine Chinese indigenous sheep breeds and two imported sheep breeds was studied with five endonucleases,Hinf I,Msp I,Sau3A I,Xsp I and Taq I,using PCR-RFLP.The results indicated that there existed two basic haplotypes in the region ofmtDNA D-loop.It couldbe inferred that Chinese indigenous sheep breeds originated from two maternal ancestors.The average polymorphic degree (π value=0.0421%) of mtDNA D-loop showed that the genetic diversity of mtDNA of Chinese indigenous sheep breeds was very low.

  18. RESEARCH REGARDING NATIVE DOMESTICATED ENDANGERED ANIMAL BREEDS

    Directory of Open Access Journals (Sweden)

    M. MATIUłI

    2013-12-01

    Full Text Available The research done in this paper was made in Transylvania and Banat. The autochthon domestic endangered animal breeds were inventoried, zonal maps on where to encounter these breeds being drawn. The list of these species contains: the gray cattle, the Mocanitza (the mountain breed sheep, the Transylvanian Pinzgau, the black Pinzgau, the Transylvanian bull, the Nonius horse, the Western mountain hores breed, the Mangalitza breed, the Bazna breed, the black of Strei, the Transylvanian Merino, the curly haired sheep of Banat, the white goat of Banat, the hound of Ardeal region. In the last 20 years, in these species there was a significant drop in numbers and, in some cases, even in quality. If urgent measures to preserve these species will not be taken, there is a possibility that in the next 10 years, some of them will disappear. The protection plans for these breeds are, in the majority of the cases, just simple projects that no one is applying. Since 2007, in the Faculty of Veterinary Medicine there is a Data Base to monitor the native domestic animals from the western area of Romania. The data from this data base are used by farmers, pickers and specialists from the food industry.

  19. Cassava Mutation Breeding: Current Status and Trends

    International Nuclear Information System (INIS)

    Cassava (Manihot esculenta Crantz) is an important energy source in the diets of millions of people in the tropical and subtropical regions of the world, especially the poor. Also its industrial uses are steadily growing for starch, animal feed and bio-ethanol. Although it has high economic and social relevance, few major scientific efforts have been made to improve the crop until the 1970s. With the goals and objectives of cassava improvement through breeding, different strategies have been developed during the last several decades, such as evaluation and selection of the local landraces, introduced germplasm (as clones or segregating F1 population), hybridization (including inbreeding by both recurrent back-cross schemes and double haploids (DH)), interspecific hybridization, polyploidy breeding, genetic transformation, use of molecular markers and mutation breeding. Induced mutation breeding on cassava has been explored in the last several decades with few published papers. Yet, the production of novel genotypes, such as high amylose and small granule mutants and mutants with tolerance to post harvest physiological deterioration (PPD), has been reported. These results suggest that mutagenesis could be an effective alternative for cassava breeding. However, many drawbacks still exist in cassava mutation breeding, such as the occurrence of chimeras. Validated and developing protocols for different biotechnologies, such as TILLING protocol, cassava genome sequencing and cassava somatic embryogenesis, will significantly ameliorate the drawbacks to traditional mutation breeding, and consequently aid the routine application of induced mutation in both cassava improvement and in gene discovery and elucidation. (author)

  20. Microsatellite DNA typing for assessment of genetic variability in Tharparkar breed of Indian zebu (Bos indicus) cattle, a major breed of Rajasthan

    Indian Academy of Sciences (India)

    M. Sodhi; M. Mukesh; B. Prakash; S. P. S. Ahlawat; R. C. Sobti

    2006-12-01

    The present study estimates genetic variability with a set of 25 microsatellite markers in a random sample of 50 animals of Tharparkar breed of Indian zebu (Bos indicus) cattle. Tharparkar is a dual-purpose breed, valued for its milk as well as draught utility, and is adapted to the inhospitable Thar desert conditions of Rajasthan typified by summer temperature hovering above 50°C, sparse rainfall and vegetation, and scarcity of even drinking water. The observed number of alleles ranged from 4 (ETH3, ILSTS030, INRA5, INRA63 and MM8) to 11 (HEL9 and ILSTS034), with allelic diversity (average number of observed alleles per locus) of 6.20. Observed and expected heterozygosity ranged from 0.25 (INRA63) to 0.77 (ETH10), and from 0.51 (HEL5 and HAUT27) to 0.88 (HEL9) respectively. Wide range of genetic variability supported the utility of these microsatellite loci in measurement of genetic diversity indices in other Indian cattle breeds too. Various average genetic variability measures, namely allele diversity (6.20), observed heterozygosity (0.57), expected heterozygosity (0.67) and mean polymorphism information content (0.60) values showed substantial within-breed genetic variability in this major breed of Rajasthan, despite accumulated inbreeding as reflected by high average inbreeding coefficient $(F_{\\text{IS}} = 0.39)$. The Tharparkar population has not experienced a bottleneck in the recent past.

  1. INFLUENCE OF BREED ON CARCASS CUTS COMPOSITION

    Directory of Open Access Journals (Sweden)

    Silvester Žgur

    2000-06-01

    Full Text Available Carcass from 260 Simmental and 159 Brown bulls were dissected first to different cuts (chuck, shoulder, front shank, rib roast, back, loin, tenderloin, brisket, rib, flank, leg and hind shank and then to lean, fat, tendon and bone. The comparison between two breeds was made at 12.5 % carcass fat. Simmental breed had statistically significantly higher share of leg and brisket with rib and lower share of chuck, front and hind shank, rib roast, tenderloin and flank, with higher lean and lower bone percentage, but the differences were relatively small compared to Brown breed.

  2. Management and Breeding Soundness of Mature Bulls.

    Science.gov (United States)

    Palmer, Colin W

    2016-07-01

    Mature bulls must be fed a balanced ration, vaccinated appropriately, and undergo a breeding soundness evaluation to ensure they meet what is required of a short, but intense breeding season. To be classified as a satisfactory potential breeder, minimum standards for physical soundness, scrotal circumference, sperm motility, and sperm morphology must be achieved using an accepted bull-breeding soundness evaluation format. Sperm production requires approximately 70 days. Heat and stress are the most common insults to spermatogenesis, causing an increase in morphologic abnormalities with obesity-associated scrotal fat accumulation being the most frequent cause of elevated testicular temperature in mature bulls.

  3. Guinea-pig breeding for meat production

    OpenAIRE

    Aguilera Hidalgo, Grey Estefanía

    2013-01-01

    Guinea-pig breeding for meat production is one of the unknown economical activities in the Czech Republic and in many other contries in the world. It is an industry that is developing fast in Ecuador, Peru, Bolivia and Colombia, because of fact that it is easy, fast and it does not need a lot of investment and where its consumption averages 20 to 65 milion guinea-pigs per year. The main objective of guinea-pig breeding just like breeding of other livestock, is to produce big amounts of meat w...

  4. In vitro technology for mutation breeding

    International Nuclear Information System (INIS)

    The ultimate aim of the Co-ordinated Research Programme on In Vitro Technology for Mutation Breeding is to provide new effective tools for plant breeders to construct new cultivars, thus increasing agricultural production of food, feed and industrial raw material, particularly in developing countries. The participants of the research co-ordination meetings considered the potential of new advances of agricultural biotechnology, especially the use of in vitro techniques for mutation breeding. They discussed and co-ordinated plans in conjunction with the impact on plant breeding of novel technologies, such as use of somaclonal variation, cell hybridization and molecular genetics

  5. Breeding Practices in Sheep Farming

    Directory of Open Access Journals (Sweden)

    M.A. Shejal

    2009-02-01

    Full Text Available The sheep is an important economic livestock species, contributing greatly to the Indian economy, especially in arid, semi arid and mountain areas. The current population in world is 1110.78 millions, around 44.85 millions (1987 sheeps in India (ICAR., 2002. Sheeps are mostly reared for meat and wool. The average annual wool production per sheep is between 3.5 to 5.5 kg of fine quality wool in Australia, New Zealand and U.S.S.R., where as in India except Magra sheep which annually yield more than 2 kg wool having staple length 5.8 cm, the average of rest of the wool produced is less than 1.0 kg per sheep of inferior quality (Banerjee G.C., 1998. Therefore many farmers in southern India adapted sheep rearing for meat production than for wool production. For yielding more production from sheep farming one should have sound knowledge of general information related to the reproduction and different breeding practices. [Vet. World 2009; 2(1.000: 43-44

  6. Breeding bald eagles in captivity

    Science.gov (United States)

    Maestrelli, J.R.; Wiemeyer, Stanley N.

    1975-01-01

    A 7-year-old female Bald Eagle from Alabama was paired with a 4-year-old Alaskan male in a large flight pen during December 1969. Both birds were free of physical defects when originally placed in the pen but the female was blind in one eye prior to the 1973 breeding season.....Nesting first occurred during 1971 when at least two eggs were laid; all but one, which showed no sign of embryonic development after being incubated for 56 days, were broken by the adult birds. Two of three eggs laid in 1972 hatched. Both young died a few days after hatching following a period of inclement weather. Three eggs were laid and hatched during 1973. Antagonism between the nestlings was observed soon after hatching and may have been responsible for the unobserved death of one nestling, two days after the third young hatched. The two remaining young were raised by the adult birds and eventually left the nest 85 days after the first egg hatched. Incubation periods for the 1972-73 clutches averaged 35 days. No renesting attempts were made by the eagles during the 3.year period.

  7. Comparison and correlation analysis of different Swine breeds meat quality.

    Science.gov (United States)

    Li, Y X; Cabling, M M; Kang, H S; Kim, T S; Yeom, S C; Sohn, Y G; Kim, S H; Nam, K C; Seo, K S

    2013-07-01

    This study was performed to determine the influence of pig breed and gender on the ultimate pH and physicochemical properties of pork. The correlations between pH and pork quality traits directly related to carcass grade, and consumer's preference were also evaluated. The pH and meat grading scores for cold carcasses of 215 purebred pigs (Duroc, Landrace, and Yorkshire) from four different farms were obtained. Meat quality parameters of the pork loin were analyzed. Duroc and female animals were more affected compared to other breeds and male pigs. Duroc animals had the highest ultimate pH, carcass back fat thickness, marbling scores, yellowness, and fat content (pmeat quality characteristics (p<0.001). Ultimate pH was positively correlated with carcass weight (0.20), back fat thickness (0.19), marbling score (0.17), and color score (0.16) while negatively correlated with cooking loss (-0.24) and shear force (-0.20). Therefore, pork samples with lower ultimate pH had lower cooking loss, higher lightness, and higher shear force values irrespective of breed. PMID:25049866

  8. Slaughter performance and meat quality of three Italian chicken breeds

    Directory of Open Access Journals (Sweden)

    Gian Maria Chiericato

    2010-01-01

    Full Text Available A trial was carried out to study the slaughter performance and the meat quality of three Italian dual-purpose chicken breeds: Ermellinata di Rovigo (ER, Robusta lionata (RL and Robusta maculata (RM. Females were studied from June to October from 47 days of life until slaughtered age, at 138 (I age and 168 (II age days of age. Each genotype had access to outdoor and indoor spaces. RL and RM birds showed a higher final body weight, and provided heavier carcass and commercial cuts than ER (P<0.01, at both ages. The dressing-out percentage of RL and RM females was more favourable than ER ones, in particular at II age (P<0.01. Differences in carcass conformation were observed at II age: the ER carcass showed a higher (P<0.01 proportion of leg and wing. The RM carcass had a higher (P<0.01 proportion of breast. The thigh meat/ bone ratio was higher in RL at I age (P<0.01 and II (P<0.05 age. Significant differences in breast colour were observed among the breeds; ER thigh showed the highest (P<0.05 a* value. At II age, lipids were lower (P<0.01 in ER breast; thigh lipids were similar among the groups. Slaughtering at I age seem to be more advantageous for the ER breed since it is more precocious.

  9. Considering genetic characteristics in German Holstein breeding programs.

    Science.gov (United States)

    Segelke, D; Täubert, H; Reinhardt, F; Thaller, G

    2016-01-01

    Recently, several research groups have demonstrated that several haplotypes may cause embryonic loss in the homozygous state. Up to now, carriers of genetic disorders were often excluded from mating, resulting in a decrease of genetic gain and a reduced number of sires available for the breeding program. Ongoing research is very likely to identify additional genetic defects causing embryonic loss and calf mortality by genotyping a large proportion of the female cattle population and sequencing key ancestors. Hence, a clear demand is present to develop a method combining selection against recessive defects (e.g., Holstein haplotypes HH1-HH5) with selection for economically beneficial traits (e.g., polled) for mating decisions. Our proposed method is a genetic index that accounts for the allele frequencies in the population and the economic value of the genetic characteristic without excluding carriers from breeding schemes. Fertility phenotypes from routine genetic evaluations were used to determine the economic value per embryo lost. Previous research has shown that embryo loss caused by HH1 and HH2 occurs later than the loss for HH3, HH4, and HH5. Therefore, an economic value of € 97 was used against HH1 and HH2 and € 70 against HH3, HH4, and HH5. For polled, € 7 per polled calf was considered. Minor allele frequencies of the defects ranged between 0.8 and 3.3%. The polled allele has a frequency of 4.1% in the German Holstein population. A genomic breeding program was simulated to study the effect of changing the selection criteria from assortative mating based on breeding values to selecting the females using the genetic index. Selection for a genetic index on the female path is a useful method to control the allele frequencies by reducing undesirable alleles and simultaneously increasing economical beneficial characteristics maintaining most of the genetic gain in production and functional traits. Additionally, we applied the genetic index to real data and

  10. The ascent of cat breeds: genetic evaluations of breeds and worldwide random-bred populations.

    Science.gov (United States)

    Lipinski, Monika J; Froenicke, Lutz; Baysac, Kathleen C; Billings, Nicholas C; Leutenegger, Christian M; Levy, Alon M; Longeri, Maria; Niini, Tirri; Ozpinar, Haydar; Slater, Margaret R; Pedersen, Niels C; Lyons, Leslie A

    2008-01-01

    The diaspora of the modern cat was traced with microsatellite markers from the presumed site of domestication to distant regions of the world. Genetic data were derived from over 1100 individuals, representing 17 random-bred populations from five continents and 22 breeds. The Mediterranean was reconfirmed to be the probable site of domestication. Genetic diversity has remained broad throughout the world, with distinct genetic clustering in the Mediterranean basin, Europe/America, Asia and Africa. However, Asian cats appeared to have separated early and expanded in relative isolation. Most breeds were derived from indigenous cats of their purported regions of origin. However, the Persian and Japanese bobtail were more aligned with European/American than with Mediterranean basin or Asian clusters. Three recently derived breeds were not distinct from their parental breeds of origin. Pure breeding was associated with a loss of genetic diversity; however, this loss did not correlate with breed popularity or age.

  11. Final Performance Report : Snowy Plover Breeding Distribution

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — Surveys of breeding populations and nesting habitat of the snowy plover were conducted from January to August, 1989 along the Gulf Coast of Florida and Alabama....

  12. Breeding for mechanised sesame production in Australia

    International Nuclear Information System (INIS)

    Introduction of sesame germplasm from Myanmar and Mexico was not satisfactory for successful development of the Australian sesame industry. Therefore, a national breeding programme was undertaken by CSIRO and the Northern Territory Department of Primary Industry and Fisheries (NTDPIF). The main traits considered for selection were latitudinal adaptation, temperature response, growth habit, determinacy, palatability, capsules per leaf axil, seed shattering and seed dormancy. The CSIRO breeding efforts started in 1989 with a hybridization programme using germplasm from Japan, Mexico, Myanmar, Rep. of Korea and Venezuela. This programme resulted in selection in the F6 generation of branched types released under the names 'Beech's choice' and 'Aussie Gold'. The NTDPIF sesame breeding programme started in 1993 with hybridization of introductions. The Mexican cultivar 'Yori 77' was selected for release, and after several years of intraline selection the uniculm cultivar 'Edith' was released in 1996. Further breeding continues to improve seed retention and resistance to charcoal rot. (author)

  13. Breeding peregrine falcon survey, Amchitka Island, Alaska

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — A breeding peregrine falcon (Falco peregrines) survey was conducted on Amchitka Island, Alaska Maritime National Wildlife Refuge from May 2-9, 1981 in conjunction...

  14. Waterfowl Breeding Population and Habitat Survey

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — The Waterfowl Breeding Population and Habitat Survey was initiated experimentally in 1947 and became operational in 1955. It is conducted cooperatively by the U.S....

  15. Waterfowl breeding population survey: Southern Manitoba: 1983

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — This report summarizes the Waterfowl Breeding Population and Habitat Survey for southern Manitoba during 1983. The primary purpose of the survey is to provide...

  16. Western Ontario: Waterfowl breeding population survey: 1998

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — This report summarizes the Waterfowl Breeding Population and Habitat Survey for western Ontario during 1998. The primary purpose of the survey is to provide...

  17. Waterfowl breeding population survey: Southern Saskatchewan: 1979

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — This report summarizes the Waterfowl Breeding Population and Habitat Survey for southern Saskatchewan during 1979. The primary purpose of the survey is to provide...

  18. For Refugee Children, Support Breeds Success

    Science.gov (United States)

    ... nih.gov/medlineplus/news/fullstory_159196.html For Refugee Children, Support Breeds Success Study sees 'potential to ... June 3, 2016 (HealthDay News) -- With adequate support, refugee children do as well in school as other ...

  19. Manual on mutation breeding. 2. ed.

    International Nuclear Information System (INIS)

    The manual is a compilation of work done on the use of induced mutations in plant breeding, and presents general methods and techniques in this field. The use of chemical mutagens and ionizing radiations (X-rays, gamma rays, α- and β-particles, protons, neutrons) are described as well as the effects of these mutagens. The different types of mutations achieved can be divided into genome mutations, chromosome mutations and extra nuclear mutations. Separate chapters deal with mutation techniques in breeding seed-propagated species and asexually propagated plants (examples of development of cultivars given). Plant characters which can be improved by mutation breeding include yield, ripening time, growth habit, disease resistance and tolerance to environmental factors (temperature, salinity etc.). The use of mutagens for some specific plant breeding problems is discussed and attention is also paid to somatic cell genetics in connection with induced mutations. The manual contains a comprehensive bibliography (60 p. references) and a subject index

  20. California Least Tern Breeding Survey 1995 Season

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — Sterna antillarum browni) nested at 37 sites along the coast of California. This 7% decrease in breeding population size from 1994 brings to an end the trend since...

  1. Equine post-breeding endometritis: A review

    Science.gov (United States)

    2008-01-01

    The deposition of semen, bacteria and debris in the uterus of the mare after breeding normally induces a self-limiting endometritis. The resultant fluid and inflammatory products are cleared by 48 hours post cover. Mares that are susceptible to persistent post-breeding endometritis (PPBEM) have impaired uterine defence and clearance mechanisms, making them unable to resolve this inflammation within the normal time. This persists beyond 48 hours post-breeding and causes persistent fluid accumulation within the uterus. Mares with PPBEM have an increased rate of embryonic loss and a lower overall pregnancy rate than those without the condition. To enhance conception rates, mares at high risk need optimal breeding management as well as early diagnosis, followed by the most appropriate treatment. This article reviews the pathogenesis, diagnosis and treatment of PPBEM and the management of affected mares. PMID:21851709

  2. Equine post-breeding endometritis: A review

    Directory of Open Access Journals (Sweden)

    Maischberger E

    2008-03-01

    Full Text Available Abstract The deposition of semen, bacteria and debris in the uterus of the mare after breeding normally induces a self-limiting endometritis. The resultant fluid and inflammatory products are cleared by 48 hours post cover. Mares that are susceptible to persistent post-breeding endometritis (PPBEM have impaired uterine defence and clearance mechanisms, making them unable to resolve this inflammation within the normal time. This persists beyond 48 hours post-breeding and causes persistent fluid accumulation within the uterus. Mares with PPBEM have an increased rate of embryonic loss and a lower overall pregnancy rate than those without the condition. To enhance conception rates, mares at high risk need optimal breeding management as well as early diagnosis, followed by the most appropriate treatment. This article reviews the pathogenesis, diagnosis and treatment of PPBEM and the management of affected mares.

  3. The ecological production of cleans stock-breeding problems

    International Nuclear Information System (INIS)

    KazSRTIS have made researches on study of maintenance in cows' milk developed in Almaty's region, determination of heavy metal salts and radionuclides. It has been noted that maintenance of mercury, lead, cupper and zinc increased in suburb's housekeeping cows' milk, which was disposed nearly international highway and industry activities. It is known that entering radionuclides human organism happens by food chain 'soil - vegetable cover - animals product stock-breeding -person'. Animals transformer stern's plants energy at the in conclusion it allows to take the compare with initial vegetable exponent more ecological tidy products limits stream toxic elements in food series of person. It lets to study agricultural animals, how 'biological filter' in production ecological clean and healthy product of food. Changing structure and set stern's rationals, method contents the limit of animals stream manufacturing pollution from soil vegetable cover agricultural used in milk and in mead from 2 till 5 times. Utilisation tidy stern's in final period fatten meat cattle give possibility to clean the organs and tissue of animals which representative food's value from admixture to level, corresponding medical - hygienic standards. It is necessary to make analysis on compound investigation on the effect of radionuclides in agricultural animals, namely to utilize them, that really barrier migrate toxic elements in captured chain of person. The ways of solutions in ecological stock-breeding problems are next: to show up ecological tidy and ecological unsuccessful places; to study rules of transition in basic pollutions of food chains; toxic elements limitation rules in stock-breeding production; utilization manufactory-polluted territories from technological elements for stock-breeding

  4. Citrus breeding, genetics and genomics in Japan

    OpenAIRE

    Omura, Mitsuo; Shimada, Takehiko

    2016-01-01

    Citrus is one of the most cultivated fruits in the world, and satsuma mandarin (Citrus unshiu Marc.) is a major cultivated citrus in Japan. Many excellent cultivars derived from satsuma mandarin have been released through the improvement of mandarins using a conventional breeding method. The citrus breeding program is a lengthy process owing to the long juvenility, and it is predicted that marker-assisted selection (MAS) will overcome the obstacle and improve the efficiency of conventional br...

  5. Breeding for genetic resistance to disease

    OpenAIRE

    Pinard-van der Laan, Marie-Helene

    2012-01-01

    Animal health issues are of increasing importance to all animal breeding sectors, including poultry, by raising health and welfare issues and causing major production costs, but also to citizens, by affecting possibly their own health and lifestyle choices. So far, traditional selective breeding approaches have been applied successfully by poultry breeders to enhance production and reproduction traits; but the inclusion of animal health related traits are scarcely considered because of a clea...

  6. Inventory analysis of West African cattle breeds

    International Nuclear Information System (INIS)

    The improvement of livestock productivity and the preservation of their genetic diversity to allow breeders to select animals adapted to environmental changes, diseases and social needs, require a detailed inventory and genetic characterization of domesticated animal breeds. Indeed, in developing countries, the notion of breed is not clearly defined, as visual traits are often used and characterization procedures are often subjective. So it is necessary to upgrade the phenotypic approach using genetic information. At CIRDES, a regional centre for subhumid livestock research and development, such studies have been conducted. This paper focuses on cattle breed inventory in seven countries of West Africa as a tool for genetic research on cattle improvement. Data collection was done using a bibliographical study, complemented by in situ investigations. According to phenotypic description and concepts used by indigenous livestock keepers, 13 local cattle breeds were recognized: N'dama, Kouri, the Baoule-Somba group, the Lagoon cattle group, zebu Azawak, zebu Maure, zebu Touareg, zebu Goudali, zebu Bororo, zebu White Fulani, zebu Djelli, zebu Peuhl soudanien and zebu Gobra (Toronke). Nine exotic breeds, (American Brahman, Gir, Girolando, Droughtmaster, Santa Gertrudis, Holstein, Montbeliarde, Jersey and Brown Swiss) and five typical cross-breeds (Holstein x Goudali; Montbeliarde x Goudali; Holstein x Azawak; Brown Swiss x Azawak; and Brown Swiss x zebu peuhl soudanien) were also found. From this initial investigation, the areas of heavy concentration of herds and the most important breeds were described. The review has also indicated the necessity for a balance between improving livestock productivity and the conservation of trypanotolerant breeds at risk of extinction in West Africa. (author)

  7. Briefing note on animal breeding and genetics

    OpenAIRE

    Bruce, Ann

    2012-01-01

    Historically, adoption of breeding technologies by sheep and beef farmers has been slow and variable. This research aimed to understand why, and if the context of reducing methane emissions was likely to change adoption rates. Sheep and beef farmers around the UK were interviewed to find out if they would adopt a range of technologies to reduce methane emissions.* The farmers interviewed were less than convinced that breeding could be effective in reducing greenhouse gas emissions.

  8. [Pain caused by breeding: definition, judgment, pathogenesis].

    Science.gov (United States)

    Herzog, A

    1997-02-01

    Special terms of the "German Animal Protection Law (section 11b)"and the "European Agreement for Protection of Domestic Animals" particularly "torture-breeding, genetic characteristics, well-being, soundness, pains, injuries and specific use" are commented. Examples of torture-breedings are discussed: Dog (Merle-faktor, brachycephalie, atrichosis), cat (Mans-factor, W-gene, folded-ears), birds (tuffs, ear-drops, tailesness, hypertrophy of bill-warts, abnormal position of tarsal-joints, hypertrophy of imposing behavior).

  9. Mutagenesis as a breeding method in lentil

    International Nuclear Information System (INIS)

    Full text: Mutagenesis was used to develop cultivars with good adaptability to exogenous factors and with increased productivity. By means of this alternative breeding procedure, increases in biological and nutritive value of the seeds were studied. To increase genetic variability in lentil (Lens culinaris Medic.) breeding material, experimental mutagenesis was applied parallel to conventional breeding methods. The aim was to characterize the mutant lines as well as determine whether some of them could be directly registered as cultivars or as gene donors in breeding programme. Within the period 1993-1996, eight mutant lentil lines were studied under field conditions. They were obtained as a result of gamma rays (60Co) and ethyl methanesulfonate (EMS) treatment of the small seeded cultivar 'Tadjikskaya 95'. Air-dried seeds were treated. During the vegetative stage, phenological observation was made. The structural elements of productivity were established by biometrical analysis of 25-30 plants from each of the variants. Phytopathological evaluations were made using the scoring procedure established by ICARDA. Protein content was determined by the Kiejdhal method. The technological qualities of the seeds were determined using the method of Tretyakova and Ustinova. The mutant lines differed considerably in their biological traits from the parent cultivar. The vegetative period ranged from 84 to 89 days. The mutant lines were latermaturing than parent variety Tadjikskaya 95 by 1-5 days. As a result of mutagen treatment, the range in plant height was expanded from 1 to 8.3 cm. Line 96-8, obtained after irradiation with gamma rays, was the tallest (40.3 cm). Lodging of the mutant lines was greater than that of the initial cultivar and ranged from 20.0 to 66.7%. The trait varied to a great extent depending on environmental conditions. Mutagenic treatments also caused changes in seed size and seed coat colour. Development of resistance to important diseases of lentil in

  10. Prunus transcription factors: Breeding perspectives

    Directory of Open Access Journals (Sweden)

    Valmor João Bianchi

    2015-06-01

    Full Text Available Many plant processes depend on differential gene expression, which is generally controlled by complex proteins called transcription factors (TFs. In peach, 1,533 TFs have been identified, accounting for about 5.5% of the 27,852 protein-coding genes. These TFs are the reference for the rest of the Prunus species. TF studies in Prunus have been performed on the gene expression analysis of different agronomic traits, including control of the flowering process, fruit quality, and biotic and abiotic stress resistance. These studies, using quantitative RT-PCR, have mainly been performed in peach, and to a lesser extent in other species, including almond, apricot, black cherry, Fuji cherry, Japanese apricot, plum, and sour and sweet cherry. Other tools have also been used in TF studies, including cDNA-AFLP, LC-ESI-MS, RNA and DNA blotting or mapping. More recently, new tools assayed include microarray and high-throughput DNA sequencing (DNA-Seq and RNA sequencing (RNA-Seq. New functional genomics opportunities include genome resequencing and the well-known synteny among Prunus genomes and transcriptomes. These new functional studies should be applied in breeding programs in the development of molecular markers. With the genome sequences available, some strategies that have been used in model systems (such as SNP genotyping assays and genotyping-by-sequencing may be applicable in the functional analysis of Prunus TFs as well. In addition, the knowledge of the gene functions and position in the peach reference genome of the TFs represents an additional advantage. These facts could greatly facilitate the isolation of genes via QTL (quantitative trait loci map-based cloning in the different Prunus species, following the association of these TFs with the identified QTLs using the peach reference genome.

  11. Neutronic Comparison of Tritium-Breeding Performance of Candidate Tritium-Breeding Materials

    Institute of Scientific and Technical Information of China (English)

    郑善良; 吴宜灿

    2003-01-01

    Tritium self-sustainment, which will meet the fuel requirement of fusion reactor, isone of the key issues of fusion power development. The tritium breeding performances of varioustritium-breeding materials are compared based on a series of neutronics calculations using three-dimensional Monte Carlo neutron-photon transport code MCNP/4C with the IAEA FENDL-2data library. The effects of the dimensions of the tritium-breeding zone and the enrichment of 6Lion Tritium Breeding Ratio (TBR) are analyzed. The effects of Be as a neutron multiplier on TBRare also calculated.

  12. Skeletal muscle transcriptional profiles in two Italian beef breeds, Chianina and Maremmana, reveal breed specific variation.

    Science.gov (United States)

    Bongiorni, S; Gruber, C E M; Chillemi, G; Bueno, S; Failla, S; Moioli, B; Ferrè, F; Valentini, A

    2016-04-01

    Chianina and Maremmana breeds play an important role in the Italian cattle meat market. The Chianina breed is an ancient breed principally raised for draught. Now this breed is the worldwide recognized producer of top quality beef, tasteful and tender, specifically the famous "Florentine steak". The Maremmana characterized by a massive skeletal structure, is a rustic cattle breed selected for adaptability to the marshy land of the Maremma region. We used a high throughput mRNA sequencing to analyze gene expression in muscle tissues of two Italian cattle breeds, Maremmana (MM) and Chianina (CN) with different selection history. We aim to examine the specific genetic contribution of each breed to meat production and quality, comparing the skeletal muscle tissue from Maremmana and Chianina. Most of the differentially expressed genes were grouped in the Glycolysis/Gluconeogenesis pathways. The rate and the extent of post-mortem energy metabolism have a critical effect on the conversion of muscle to meat. Furthermore, we aim at discovering the differences in nucleotide variation between the two breeds which might be attributable to the different history of selection/divergence. In this work we could emphasize the involvement of pathways of post-mortem energy metabolism. Moreover, we detected a collection of coding SNPs which could offer new genomic resources to improve phenotypic selection in livestock breeding program. PMID:26896938

  13. Citrus breeding, genetics and genomics in Japan.

    Science.gov (United States)

    Omura, Mitsuo; Shimada, Takehiko

    2016-01-01

    Citrus is one of the most cultivated fruits in the world, and satsuma mandarin (Citrus unshiu Marc.) is a major cultivated citrus in Japan. Many excellent cultivars derived from satsuma mandarin have been released through the improvement of mandarins using a conventional breeding method. The citrus breeding program is a lengthy process owing to the long juvenility, and it is predicted that marker-assisted selection (MAS) will overcome the obstacle and improve the efficiency of conventional breeding methods. To promote citrus molecular breeding in Japan, a genetic mapping was initiated in 1987, and the experimental tools and resources necessary for citrus functional genomics have been developed in relation to the physiological analysis of satsuma mandarin. In this paper, we review the progress of citrus breeding and genome researches in Japan and report the studies on genetic mapping, expression sequence tag cataloguing, and molecular characterization of breeding characteristics, mainly in terms of the metabolism of bio-functional substances as well as factors relating to, for example, fruit quality, disease resistance, polyembryony, and flowering.

  14. Testicular Histomorphometric Evaluation of Zebu Bull Breeds

    Directory of Open Access Journals (Sweden)

    Paulo Antônio Terrabuio Andreussi

    2014-12-01

    Full Text Available The objective of this study was to evaluate the quantitative histology and testicular biometrics in zebu bulls of different breeds. Testicular fragments of Nelore (n=10, Polled Nelore (n=6, Gir (n=5, Guzerat (n=5 and Tabapuã bulls (n=5 were used. The fragments were perfusion-fixed in Karnovsky solution, embedded in glycol methacrylate and stained with toluidine blue-1% sodium borate. The Nelore animals had a higher tubular volumetric proportion (85.2% and greater height of the seminiferous epithelium (73.2 µm than the Gir, Guzerat and Tabapuã breeds. The Nelore animals also had a higher volumetric proportion of Leydig cells (5.2% than the Guzerat and Tabapuã breeds. There was no significant difference for any of these parameters between the Nelore and Polled Nelore breeds. The gonadosomatic index, seminiferous tubule diameter, cross-sectional area of the seminiferous tubule and tubule length (total length and length per gram of testicular parenchyma did not vary among the breeds studied. The morphometric parameters evaluated suggested that the genetic selection applied to the Nelore and Polled Nelore breeds improved the efficiency of spermatogenesis in these breeders.

  15. Citrus breeding, genetics and genomics in Japan.

    Science.gov (United States)

    Omura, Mitsuo; Shimada, Takehiko

    2016-01-01

    Citrus is one of the most cultivated fruits in the world, and satsuma mandarin (Citrus unshiu Marc.) is a major cultivated citrus in Japan. Many excellent cultivars derived from satsuma mandarin have been released through the improvement of mandarins using a conventional breeding method. The citrus breeding program is a lengthy process owing to the long juvenility, and it is predicted that marker-assisted selection (MAS) will overcome the obstacle and improve the efficiency of conventional breeding methods. To promote citrus molecular breeding in Japan, a genetic mapping was initiated in 1987, and the experimental tools and resources necessary for citrus functional genomics have been developed in relation to the physiological analysis of satsuma mandarin. In this paper, we review the progress of citrus breeding and genome researches in Japan and report the studies on genetic mapping, expression sequence tag cataloguing, and molecular characterization of breeding characteristics, mainly in terms of the metabolism of bio-functional substances as well as factors relating to, for example, fruit quality, disease resistance, polyembryony, and flowering. PMID:27069387

  16. Structure and genetic relationships between Brazilian naturalized and exotic purebred goat domestic goat (Capra hircus breeds based on microsatellites

    Directory of Open Access Journals (Sweden)

    Joelliton Domingos de Oliveira

    2007-03-01

    Full Text Available The genetic relationships and structure of fourteen goat (Capra hircus populations were estimated based on genotyping data from 14 goat populations (n = 410 goats at 13 microsatellite loci. We used analysis of molecular variance (AMOVA, principal component analysis (PCA and F statistics (F IS, F IT and F ST to evaluate the genetic diversity (Ho, He and ad of the goats. Genetic distances between the 14 goat populations were calculated from allelic frequency data for the 13 microsatellite markers. Moderate differentiation was observed for the populations of the undefined breeds (including the Anglo-Nubian-M breed, the naturalized Brazilian breeds (Moxotó, Canindé, the exotic purebred breeds (Alpine, Saanen, Toggenbourg and Anglo-Nubian and the naturalized Brazilian Graúna group. Our AMOVA showed that a major portion (88.51% of the total genetic variation resulted from differences between individual goats within populations, while between-populations variation accounted for the remaining 11.49% of genetic variation. We used a Reynolds genetic distance matrix and PCA to produce a phenogram based on the 14 goat populations and found three clusters, or groups, consisting of the goats belonging to the undefined breed, the naturalized breeds and the exotic purebred breeds. The closer proximity of the Canindé breed from the Brazilian state of Paraíba to the Graúna breed from the same state than to the genetically conserved Canindé breed from the Brazilian state of Ceará, as well as the heterozygosity values and significant deviations from Hardy-Weinberg equilibrium suggests that there was a high number of homozygotes in the populations studied, and indicates the importance of the State for the conservation of the local breeds. Cataloguing the genetic profile of Brazilian goat populations provides essential information for conservation and genetic improvements programs.

  17. 50 CFR 15.24 - Permits for cooperative breeding.

    Science.gov (United States)

    2010-10-01

    ... 50 Wildlife and Fisheries 1 2010-10-01 2010-10-01 false Permits for cooperative breeding. 15.24... PLANTS WILD BIRD CONSERVATION ACT Permits and Approval of Cooperative Breeding Programs § 15.24 Permits for cooperative breeding. (a) Application requirements for permits for cooperative breeding....

  18. Genetic evaluation of the breeding population of a valuable reforestation conifer Platycladus orientalis (Cupressaceae)

    Science.gov (United States)

    Jin, Yuqing; Ma, Yongpeng; Wang, Shun; Hu, Xian-Ge; Huang, Li-Sha; Li, Yue; Wang, Xiao-Ru; Mao, Jian-Feng

    2016-10-01

    Platycladus orientalis, a widespread conifer with long lifespan and significant adaptability. It is much used in reforestation in north China and commonly planted in central Asia. With the increasing demand for plantation forest in central to north China, breeding programs are progressively established for this species. Efficient use of breeding resources requires good understanding of the genetic value of the founder breeding materials. This study investigated the distribution of genetic variation in 192 elite trees collected for the breeding program for the central range of the species. We developed first set of 27 polymorphic EST-derived SSR loci for the species from transcriptome/genome data. After examination of amplification quality, 10 loci were used to evaluate the genetic variation in the breeding population. We found moderate genetic diversity (average He = 0.348) and low population differentiation (Fst = 0.011). Extensive admixture and no significant geographic population structure characterized this set of collections. Our analyses of the diversity and population structure are important steps toward a long-term sustainable deployment of the species and provide valuable genetic information for conservation and breeding applications.

  19. Advances to improve the eating and cooking qualities of rice by marker-assisted breeding.

    Science.gov (United States)

    Phing Lau, Wendy Chui; Latif, Mohammad Abdul; Y Rafii, Mohd; Ismail, Mohd Razi; Puteh, Adam

    2016-01-01

    The eating and cooking qualities of rice are heavily emphasized in breeding programs because they determine market values and they are the appealing attributes sought by consumers. Conventional breeding has developed traditional varieties with improved eating and cooking qualities. Recently, intensive genetic studies have pinpointed the genes that control eating and cooking quality traits. Advances in genetic studies have developed molecular techniques, thereby allowing marker-assisted breeding (MAB) for improved eating and cooking qualities in rice. MAB has gained the attention of rice breeders for the advantages it can offer that conventional breeding cannot. There have been successful cases of using MAB to improve the eating and cooking qualities in rice over the years. Nevertheless, MAB should be applied cautiously given the intensive effort needed for genotyping. Perspectives from conventional breeding to marker-assisted breeding will be discussed in this review for the advancement of the eating and cooking qualities of fragrance, amylose content (AC), gel consistency (GC) and gelatinization temperature (GT) in rice. These four parameters are associated with eating and cooking qualities in rice. The genetic basis of these four parameters is also included in this review. MAB is another approach to rice variety improvement and development in addition to being an alternative to genetic engineering. The MAB approach shortens the varietal development time, and is therefore able to deliver improved rice varieties to farmers within a shorter period of time.

  20. Two-, three-, and four-breed rotational crossbreeding of beef cattle: carcass traits.

    Science.gov (United States)

    DeRouen, S M; Franke, D E; Bidner, T D; Blouin, D C

    1992-12-01

    Carcass data from 1,494 straightbred and rotational crossbred steers were collected over four generations. Mating systems included straightbreds (Angus [A], Brahman [B], Charolais [C], and Hereford [H]); two-breed rotations (A-B, C-B, and H-B); three-breed rotations (A-B-C, A-B-H, and B-C-H); and a four-breed rotation (A-B-C-H). Steers were randomly allocated to one of four postweaning treatments that varied in length of grazing and feeding periods. Treatment and breed group (four straightbreds and seven rotational combinations) significantly influenced hot carcass weight (HCWT), retail yield (RY), longissimus muscle area (LM), fat thickness (FT), marbling score (MS), USDA quality grade (QG), and Warner-Bratzler shear force (WBS). Feeding for longer periods resulted in greater (P < .05) HCWT, RY, FT, and MS, higher QG, and lower (P < .05) WBS values. Among the straightbreds, C was heavier and larger for HCWT, RY, and LM (P < .01), whereas A and H had greater (P < .01) FT and MS. The B was similar to H for HCWT, RY, and LM and to C for FT but ranked last (P < .01) for MS and WBS. Three- and four-breed rotational mating systems were superior (P < .05) to the two-breed rotation for HCWT, RY, and LM but were similar for FT, MS, and WBS. Rotational combinations exceeded (P < .05) the straightbreds for all carcass traits except MS.

  1. Breeding for Improved Disease Resistance in Organic Farming – Possibilities and Constraints

    Directory of Open Access Journals (Sweden)

    Magnusson Ulf

    2002-03-01

    Full Text Available Lowered incidences of disease may be reached in several ways: management and rearing measures, vaccination programmes and preventive medications as well as breeding for improved disease resistance. Here the focus is on breeding for improved resistance to infectious diseases. In comparison to conventional farming, one has to acknowledge that the spectrum of diseases in animals reared under organic conditions is different and that the proportion of the breeding stock of animals in organic farming is considerably smaller. There are at least four different approaches that may be used in breeding towards resistance to infectious diseases. The most obvious is to record disease incidence in the progeny and select those parents that produce the progeny with the lowest incidences of disease. Another approach is to use breeders possessing certain major histo-compatibility complex antigens suggested being associated with resistance to certain infections. A third approach is to analyse the heritability of a set of immune functions or related traits crucial for resistance to infections and then use the traits with high heritability in breeding programmes. Finally, one may genetically select animals for high immune response using an index that combines estimated breeding values for several immunological traits. Examples of these various approaches are given and the feasibility for using these in organic farming are discussed.

  2. Strategy and Opportunity for The Development of Duck Breeding Farm

    Directory of Open Access Journals (Sweden)

    L Hardy Prasetyo

    2006-09-01

    Full Text Available The recent development of duck farming requires the availability of good quality breeding stocks commercially in order to improve productivity and efficiency . Presently, there is no commercial duck breeding farm which can produce good quality breeding stocks . This article presents information on alternatives in developing duck breeding farm, particularly for layer ducks . There are two alternative approaches in duck breeding farms : (1 Group breeding farm, which belongs to duck farmers' group, as part of a group production system, and (2 Commercial breeding farm, by an individual private company/Semi-Government Institution in a commercial scale and particularly for export market . A good breeding farm requires appropriate systems for selection and mating of the animals in order to guarantee the quality of the breeding stocks being produced . A breeding farm must be economically and technically feasible as an economic entity, so that economic analysis and marketing must be prepared seriously.

  3. Across-Breed EPD Tables for the Year 2010 Adjusted to Breed Differences for Birth Year of 2008

    Science.gov (United States)

    Records of F1 and 3-way cross progeny of 18 breeds of sire and maternal grandsire, respectively, were used to estimate differences among the breeds for birth, weaning, and yearling weight and for maternal effects (16 breeds) of weaning weight and among 13 of the 18 breeds for carcass marbling, ribey...

  4. Across-breed EPD tables for the year 2012 adjusted to breed differences for birth year of 2010

    Science.gov (United States)

    Records of F1 and 3-way cross progeny of 18 breeds of sire and maternal grandsire, respectively, were used to estimate differences among the breeds for birth, weaning, and yearling weight and for maternal effects (16 breeds) of weaning weight and among 13 of the 18 breeds for carcass marbling, ribey...

  5. Across-breed EPD tables for the year 2016 adjusted to breed differences for birth year of 2014

    Science.gov (United States)

    Records of progeny of 18 breeds were used to estimate differences among the breeds for birth, weaning, and yearling weight and for maternal effects of weaning weight, among 15 of the 18 breeds for carcass marbling and ribeye area and among 14 of the 18 breeds for fat depth and carcass weight. The r...

  6. Across-breed EPD tables for the year 2011 adjusted to breed differences for birth year of 2009

    Science.gov (United States)

    Records of F1 and 3-way cross progeny of 18 breeds of sire and maternal grandsire, respectively, were used to estimate differences among the breeds for birth, weaning, and yearling weight and for maternal effects (16 breeds) of weaning weight and among 13 of the 18 breeds for carcass marbling, ribey...

  7. Across-Breed EPD Tables for the Year 2009 Adjusted to Breed Differences for Birth Year of 2007

    Science.gov (United States)

    Records of F1 and 3-way cross progeny of 18 breeds of sire and maternal grandsire, respectively, were used to estimate differences among the breeds for birth, weaning, and yearling weight and for maternal effects (16 breeds) of weaning weight and among 11 of the 18 breeds for carcass marbling, ribey...

  8. PEDIGREE ANALYSIS OF CINTA SENESE AND MORA ROMAGNOLA BREEDS

    OpenAIRE

    CROVETTI A.; F. Sirtori; C. Pugliese; O. Franci; Bozzi, R.

    2013-01-01

    During the last century, all the Italian pig breeds suffered a narrow bottleneck. Nowadays, only six Italian local breeds are still reared in Italy and only Cinta Senese and Mora Romagnola breeds can account on rather complete and reliable pedigree. The aim of the work was to assess both genetic variability and genetic contribution of founders and herds to the present populations for these breeds in order to explore the possibility to set up a selection of breeding animals. The re...

  9. Estimating the size of Little Grebe (Tachybaptus ruficollis) breeding populations

    OpenAIRE

    Gutiérrez, Ricard; Figuerola, Jordi

    1997-01-01

    [eng] The esti­ mation of Little Grebe Tachybaptus ruficollis breeding numbers has been found to be quite difficult, given the shy behavior of breeding birds, Different methods have been used, although their accuracy has never been tested. The breeding population was estimated in 1994 at 27 different water bodies in the Liobregat Delta (NE Spain). Breeding numbers were estimated by two methods: a) call census plus territory mapping, and b) direct nest searches. Breeding call surveys gave a 19...

  10. Public Values

    DEFF Research Database (Denmark)

    Beck Jørgensen, Torben; Rutgers, Mark R.

    2015-01-01

    administration is approached in terms of processes guided or restricted by public values and as public value creating: public management and public policy-making are both concerned with establishing, following and realizing public values. To study public values a broad perspective is needed. The article suggest......This article provides the introduction to a symposium on contemporary public values research. It is argued that the contribution to this symposium represent a Public Values Perspective, distinct from other specific lines of research that also use public value as a core concept. Public...... a research agenda for this encompasing kind of public values research. Finally the contributions to the symposium are introduced....

  11. The sub-annual breeding cycle of a tropical seabird.

    Science.gov (United States)

    Reynolds, S James; Martin, Graham R; Dawson, Alistair; Wearn, Colin P; Hughes, B John

    2014-01-01

    Breeding periodicity allows organisms to synchronise breeding attempts with the most favourable ecological conditions under which to raise offspring. For most animal species, ecological conditions vary seasonally and usually impose an annual breeding schedule on their populations; sub-annual breeding schedules will be rare. We use a 16-year dataset of breeding attempts by a tropical seabird, the sooty tern (Onychoprion fuscatus), on Ascension Island to provide new insights about this classical example of a population of sub-annually breeding birds that was first documented in studies 60 years previously on the same island. We confirm that the breeding interval of this population has remained consistently sub-annual. By ringing >17,000 birds and re-capturing a large sample of them at equivalent breeding stages in subsequent seasons, we reveal for the first time that many individual birds also consistently breed sub-annually (i.e. that sub-annual breeding is an individual as well as a population breeding strategy). Ascension Island sooty terns appear to reduce their courtship phase markedly compared with conspecifics breeding elsewhere. Our results provide rare insights into the ecological and physiological drivers of breeding periodicity, indicating that reduction of the annual cycle to just two life-history stages, breeding and moult, is a viable life-history strategy and that moult may determine the minimum time between breeding attempts.

  12. Breeding programmes for smallholder sheep farming systems: II. Optimization of cooperative village breeding schemes.

    Science.gov (United States)

    Gizaw, S; van Arendonk, J A M; Valle-Zárate, A; Haile, A; Rischkowsky, B; Dessie, T; Mwai, A O

    2014-10-01

    A simulation study was conducted to optimize a cooperative village-based sheep breeding scheme for Menz sheep of Ethiopia. Genetic gains and profits were estimated under nine levels of farmers' participation and three scenarios of controlled breeding achieved in the breeding programme, as well as under three cooperative flock sizes, ewe to ram mating ratios and durations of ram use for breeding. Under fully controlled breeding, that is, when there is no gene flow between participating (P) and non-participating (NP) flocks, profits ranged from Birr 36.9 at 90% of participation to Birr 21.3 at 10% of participation. However, genetic progress was not affected adversely. When there was gene flow from the NP to P flocks, profits declined from Birr 28.6 to Birr -3.7 as participation declined from 90 to 10%. Under the two-way gene flow model (i.e. when P and NP flocks are herded mixed in communal grazing areas), NP flocks benefited from the genetic gain achieved in the P flocks, but the benefits declined sharply when participation declined beyond 60%. Our results indicate that a cooperative breeding group can be established with as low as 600 breeding ewes mated at a ratio of 45 ewes to one ram, and the rams being used for breeding for a period of two years. This study showed that farmer cooperation is crucial to effect genetic improvement under smallholder low-input sheep farming systems.

  13. SOME EFFECTS ON GESTATION LENGTH OF TRADITIONAL HORSE BREEDS IN HUNGARY

    Directory of Open Access Journals (Sweden)

    Szabolcs Bene

    2014-03-01

    Full Text Available The national database of the use of stallions, supplied by the Department of Animal Registration and Breeding Organization of the Hungarian National Food Safety Authority was analyzed for the purpose of this research. 680 foaling data of 7 horse breeds was processed during the work. The factors effecting gestation length were examined by univariate analysis of variance (GLM. Breed, month of mating, method of fertilization, age of the mare, and sex of the foal were considered as fixed effects, and the sire was used as random effect in the study. The population genetic parameters of gestation length and the breeding value of sires were also estimated. The overall mean value of gestation length was 334.1±2.62 days. The longest gestation length (336.2 days was detected in the Kisberi breed while the Shagya had the shortest (333.3 days. Differences between the breeds were not significant. The effect of month of mating and effect of sex of foal on the gestation length were statistically proven (P<0.01. The mares fertilized in March and April had the longest gestation lengths 342.4 days, 341.4 days, respectively. In the cases of mares fertilized in later months of the year the gestation length was about 10 days shorter. Fillies had longer gestation length (335.6 days, than colts (333.5 days. Method of fertilization and age of the mare had no significant effect on the gestation length. The effects of sire on the gestation length were significant (P<0.05. The heritability (h2 of gestation length was 0.18. Based on the analysis it can be presumed, that if the mares are kept in a suitable environment (professional nutrition, good health and breeding practices, well-balanced gestation parameters can be expected in the case of any genotypes.

  14. Genome-wide association and genomic selection in animal breeding.

    Science.gov (United States)

    Hayes, Ben; Goddard, Mike

    2010-11-01

    Results from genome-wide association studies in livestock, and humans, has lead to the conclusion that the effect of individual quantitative trait loci (QTL) on complex traits, such as yield, are likely to be small; therefore, a large number of QTL are necessary to explain genetic variation in these traits. Given this genetic architecture, gains from marker-assisted selection (MAS) programs using only a small number of DNA markers to trace a limited number of QTL is likely to be small. This has lead to the development of alternative technology for using the available dense single nucleotide polymorphism (SNP) information, called genomic selection. Genomic selection uses a genome-wide panel of dense markers so that all QTL are likely to be in linkage disequilibrium with at least one SNP. The genomic breeding values are predicted to be the sum of the effect of these SNPs across the entire genome. In dairy cattle breeding, the accuracy of genomic estimated breeding values (GEBV) that can be achieved and the fact that these are available early in life have lead to rapid adoption of the technology. Here, we discuss the design of experiments necessary to achieve accurate prediction of GEBV in future generations in terms of the number of markers necessary and the size of the reference population where marker effects are estimated. We also present a simple method for implementing genomic selection using a genomic relationship matrix. Future challenges discussed include using whole genome sequence data to improve the accuracy of genomic selection and management of inbreeding through genomic relationships.

  15. Bird-window collisions in the summer breeding season

    Directory of Open Access Journals (Sweden)

    Stephen B. Hager

    2014-06-01

    Full Text Available Birds that reside in urban settings face numerous human-related threats to survival, including mortality from bird-window collisions (BWCs. Our current understanding of this issue has largely been driven by data collected during spring and fall migration, and patterns of collision mortality during the summer breeding season remain relatively unexplored. We assessed BWCs during four breeding seasons (2009–2012 at a site in northwestern Illinois, USA, by comparing the abundance, richness, migratory class, and age of the species living around buildings to species mortally wounded by window collisions. We also systematically assessed the daily timing of BWCs throughout the breeding season. We documented BWCs in 4 of 25 (16% species and 7 of 21 (33% species in 2009 and 2010, respectively. The relationship between BWCs and abundance depended on age. For adults, BWCs were highest in the least abundant species, e.g., Red-eyed Vireo (Vireo olivaceus, and lowest in species with high abundance values, e.g., Chipping Sparrow (Spizella passerina. For juveniles, mortality was greatest for the most abundant species, and the American Robin (Turdus migratorius accounted for 62% of all juvenile carcasses. Early in the breeding season, collision mortality was restricted to adults of Long-distance Migrants, whereas juveniles of all three migratory guilds (Long-distance and Short-distance Migrants and Permanent Residents died at windows from late June through early August. Daily mortality for all species was highest between sunrise–1600 h and lowest from 1600 h–sunrise the next day. Generally, the species observed as carcasses matched birds considered a ‘high risk’ for BWCs, e.g., Ruby-throated Hummingbird (Archilochus colubris, and those considered ‘low risk’ were not observed as carcasses, e.g., Blue-gray Gnatcatcher (Polioptila caerulea. Our results suggest that the number of BWCs during the breeding season does not necessarily increase with

  16. Phenotypic characterization of goat breeds in Vietnam

    International Nuclear Information System (INIS)

    There are eight goat breeds in Vietnam with more than 1.5 thousand heads and about 95% of them are indigenous breeds. As one of the important livestock species, goat also plays an important role in income earning and poverty alleviation in the rural areas and is potential resource for supplying high quality meat. The Vietnamese indigenous goat breeds were created many years ago by indiscriminate crossbreeding under natural selection or crossbreeding with imported breeds. Therefore, This study is being carried out to phenotypic characterize the goat populations of the country as part of Characterization of Small Ruminant Genetic Resources in Asia supported by Vietnamese basis research project in life sciences and IAEA. Methods: Survey and distribute the questionnaires for interviewing, collect data, morphology description of the breeds and their productivity performance, where available. The research was carried out in five provinces in different geographic areas as follows: Northern Vietnam: Ha Giang province; Red river delta: HaTay province; Western Vietnam: Son la province, center Vietnam: Thanh Hoa and Ninh Thuan Provinces. The results showed that the goat population in the North is 72,5%, the south is 27,5%, in which 12,3% is in Tay Nguyen, 8,9% is in Central Coast, 2,5 % and 3,8% are in East and West Southern part consequently. The Goat population distributes mainly in the Northern Mountains, about 48% of all over country and 67% of the North (MARD). Co native goats, the most common goat breed of the country, are reared under semi-intensive or extensive system by rural peoples. The Co goat population distributes all over the country, but concentrates mainly in the North Mountains and midland provinces; they are raised for meat. There are several kinds of Co goat breeds separate by colours and figures. The Bach Thao goat population is raised mainly in central coastal provinces for both meat and milk. Six breeds were introduced to Vietnam for milk and meat

  17. Bitter Gourd: Botany, Horticulture, Breeding

    Science.gov (United States)

    Bitter gourd fruits are a good source of carbohydrates, proteins, vitamins, and minerals and have the highest nutritive value among cucurbits. Moreover, the crude protein content (11.4-20.9 g.kg-1) of bitter gourd fruits is higher than that of tomato and cucumber. This book chapter focuses on the ...

  18. Dairy buffalo breeding in countryside of China

    Directory of Open Access Journals (Sweden)

    C. Yang

    2010-02-01

    Full Text Available Chinese buffalo is of swamp type, mainly distributed in countryside of 18 provinces in southern China. China has the third population of buffalo in the world. There are 22.75 million buffaloes in China in 2005, representing 17.37% of all cattle in the whole country. Historically Chinese buffalo is mainly used for drought since their milk production is very low with an annual milk yield of 500-700 kg. Therefore, it is important to improve them to change into dairy buffalo through crossbreeding with exotic river type dairy buffalo breeds. Murrah and Nili-Ravi, the most famous river type dairy buffalo breeds in the world, were introduced from India and Pakistan in 1957 and 1974, respectively and used to crossbreed with indigenous Chinese buffalo for genetic improvement. The effect is very prominent that the performance of crossbred has been improved significantly after several decades and the milk yield reaches 1200-2000 kg. Recent years in countryside of China, buffalo rearing has been changed from extensive and dispersive model in the past into specialized small or medium dairy herd model for the present along with the rapid development of dairy buffalo breeding and the model of dairy buffalo breeding sub-district has been formed. This article introduces briefly that the system of dairy buffalo breeding as well as producing, processing and selling of buffalo milk under the current condition and the prospects of dairy buffalo development in countryside of China.

  19. Evaluation of the Campbell test and the influence of age, sex, breed, and coat color on puppy behavioral responses

    OpenAIRE

    Pérez-Guisado, Joaquín; Muñoz-Serrano, Andrés; López-Rodríguez, Rocío

    2008-01-01

    The aim of this study was to evaluate the Campbell test and discover if there is a link between a puppy’s scores and factors such as age, breed, sex, sex-breed interaction, size, Fédération Cynologique Internationale (FCI) groups, and coat color. The Campbell test was performed on 342 puppies (191 males and 151 females) of different breeds. The results show that the criteria used by Campbell to classify puppies are incomplete, and that it is more appropriate to use numerical values for each t...

  20. Value Representations

    DEFF Research Database (Denmark)

    Rasmussen, Majken Kirkegaard; Petersen, Marianne Graves

    2011-01-01

    the perspective brings valuable insights on different approaches to technology, but instead to view gender through a value lens. Contributing to this perspective, we have developed Value Representations as a design-oriented instrument for staging a reflective dialogue with users. Value Representations...... are fictional, value-driven concepts developed to promote dialogue with users about their values and how they may materialize with respect to interaction design in their everyday lives....

  1. Body mass indices analysis in the German Giant Ram breed

    Directory of Open Access Journals (Sweden)

    Silvia Patruica

    2015-05-01

    Full Text Available The study of the main body mass indices in the giant German ram breed was performed between 6.06.2014 and 10.06.2014 in a rabbitry from Diniaș town, Timiș County. The biological material was represented by 16 adult rabbit females and 10 adult males, with the average body weight of 7 kg, raised in semi-intensive system. There have been performed the following body measurements: oblique and horizontal length of the trunk, the length of thorax, the length of head, the length of ears, of neck, and of tail, the height at weithers and rump, the height of thorax and stern, the width of chest, of thorax, of rump at hip and ischia, the wide width of forehead, the thoracic circumference and the circumference of shin. Giant German Ram males have registered higher values in the body size index, in the pelvic-thoracic index, and in the rump angle index compared to females from the same breed, which have registered higher values in the index of transverse body size, in the index of massiveness, in the pelvic-thoracic index, and in the cephalic index.

  2. CALVING ANALYSIS IN COWS OF CHAROLAIS BREED AT SELECTED FARM

    Directory of Open Access Journals (Sweden)

    KLÁRA VAVRIŠÍNOVÁ

    2001-09-01

    Full Text Available At our work we have analysed the organisation of calving in Charolais breed during the years from 1998 to 2001 at selected farm. Our monitoring of calving during winter season (from January to February shows the percentage of calving was in particular years ranged from 43.2 to 71.1. The most calves were born in February. We found out (total all years diffi cult calving (value 3 in 2 cases in April (1998 and 1999 and 1 case in February (1998 and 1 in March (1999. Calving marked with value 2 (total of all years we found out in January (2 cases, February (3 cases, March (4 cases and from September to December past one case. From 18 cases of diffi cult calving what we found out, 11 calves (61.11 % come from CHV 529 bull. In calves born by normal calving was found out average weight 34.75 kg, in ones born by calving with level 2 of diffi culty 36.36 kg, and in calves born by calving with diffi culty 3 was recorded average weight 41.5 kg. Recorded weight at 210 days of age in mostly cases was similar like in published breed standard.

  3. Breeding bird density does not drive vocal individuality

    Institute of Scientific and Technical Information of China (English)

    Daniel T.BLUMSTEIN; Douglas R.MCCLAIN; Carrie DE JESUS; Gustavo ALARC(O)N-NIETO

    2012-01-01

    Many species produce individually specific vocalizations and sociality is a hypothesized driver of such individuality.Previous studies of how social variation influenced individuality focused on colonial or non-colonial avian species,and how social group size influenced individuality in sciurid rodents.Since sociality is an important driver of individuality,we expected that bird species that defend nesting territories in higher density neighborhoods should have more individually-distinctive calls than those that defend nesting territories in lower-density neighborhoods.We used Beecher's information statistic to quantify individuality,and we examined the relationship between bird density (calculated with point-counts) and vocal individuality on seven species of passerines.We found non-significant relationships between breeding bird density and vocal individuality whether regressions were fitted on species values,or on phylogenetically-independent contrast values.From these results,we infer that while individuality may be explained by social factors,breeding bird density is unlikely to be generally important in driving the evolution of individually-specific vocalizations.

  4. Selective breeding for scrapie resistance in sheep

    Directory of Open Access Journals (Sweden)

    Cristina Santos Sotomaior

    2012-11-01

    Full Text Available It is well known that the susceptibility of sheep to scrapie is determined by the host’s prion protein gene (PRNP. PRNP polymorphisms at codons 136 (alanine, A/valine, V, 154 (histidine, H/arginine, R and 171 (glutamine, Q/histidine, H/arginine, R are the main determinants of sheep susceptibility/resistance to classical scrapie. There are four major variants of the wild-type ARQ allele: VRQ, AHQ, ARH and ARR. Breeding programs have been developed in the European Union and the USA to increase the frequency of the resistant ARR allele while decreasing the frequency of the susceptible VRQ allele in sheep populations. In Brazil, little PRNP genotyping data are available for sheep, and thus far, no controlled breeding scheme for scrapie has been implemented. This review will focus on important epidemiological aspects of scrapie and the use of genetic resistance as a tool in breeding programs to control the disease.

  5. SPRING BARLEY BREEDING FOR MALTING QUALITY

    Directory of Open Access Journals (Sweden)

    Alžbeta Žofajová

    2010-05-01

    Full Text Available The aim of this contribution is to illustrate the results of spring barley breeding for malting quality and point out an important position of variety in production of  qualitative  raw material for maltinq and beer  industry as well as the system of evaluation the qualitative parameters of breeding materials and adaptation of barley breeding programms to the  new requirements of  malting and beer industry. As an example of the results obtained most recently description is made of the Ezer, Levan, Donaris, Sladar spring barley varieties with very good malting quality and effective resistance to  powdery mildew.  Cultivation of these varieties  and malting barley production with  reduced use  of pesticidies is environmentally friedly alternative. doi:10.5219/50

  6. Developments in breeding cereals for organic agriculture

    DEFF Research Database (Denmark)

    Wolfe, M.S.; Baresel, J.P.; Desclaux, D.;

    2008-01-01

    The need for increased sustainability of performance in cereal varieties, particularly in organic agriculture (OA), is limited by the lack of varieties adapted to organic conditions. Here, the needs for breeding are reviewed in the context of three major marketing types, global, regional, local......, in European OA. Currently, the effort is determined, partly, by the outcomes from trials that compare varieties under OA and CA (conventional agriculture) conditions. The differences are sufficiently large and important to warrant an increase in appropriate breeding. The wide range of environments within OA...... and between years, underlines the need to try to select for specific adaptation in target environments. The difficulty of doing so can be helped by decentralised breeding with farmer participation and the use of crops buffered by variety mixtures or populations. Varieties for OA need efficient nutrient uptake...

  7. Under-forest Breeding Pattern and the Practice Form

    Institute of Scientific and Technical Information of China (English)

    SHEN Zhong-ming

    2012-01-01

    Through the development in recent years, China’s under-forest breeding pattern can be divided into four kinds of practice form of under-forest breeding pattern (the pattern of breeding driven by leading enterprises; the pattern of breeding driven by intermediary economic organizations; the pattern of breeding driven by the professional wholesale market; the pattern of breeding driven by the modern animal husbandry demonstration areas), according to difference in the main body participating in signing the operation contract in breeding pattern. In the production practice of under-forest breeding pattern, the most widely used and successful pattern is the pattern of breeding driven by leading enterprises and its derivative forms.

  8. Male and female breeding strategies in a cooperative primate.

    Science.gov (United States)

    Yamamoto, Maria Emilia; Araujo, Arrilton; Arruda, Maria de Fatima; Lima, Ana Karinne Moreira; Siqueira, Jose de Oliveira; Hattori, Wallisen Tadashi

    2014-11-01

    Marmosets are cooperative breeders organized as extended family groups, but breeding is generally restricted to a single pair. Breeding competition is fierce in female marmosets; males, on the other hand, show low levels of intragroup aggression. We investigated male and female breeding strategies and the resulting reproductive output in 9 wild groups. Reproductive output, tenure of breeding animals, identification of the breeding system, breeding position replacements, migration and infanticide were recorded; also, we recorded grooming and aggression. Replacement of the breeding male or female was observed on nine occasions. On four occasions, the son of the breeding male inherited the breeding post, but we never observed inheritance of a breeding post by a daughter. Mostly, females attained a breeding post by immigrating to a group that had a breeding vacancy. Our results showed that Callithrix jacchus males and females use different strategies to attain a breeding position and maintain it for as long as possible. These strategies prolong the tenure of the breeding position, which is the best way to produce a large number of offspring. This article is part of a Special Issue entitled: Neotropical Behaviour. PMID:25010563

  9. Opportunities and challenges from the use of genomic selection for beef cattle breeding in Latin America

    Science.gov (United States)

    The beef cattle production in Latin America in very important on a worldwide scale and for several regional countries. The region accounts for 29% of the world cattle population and beef production. Genomic selection allows the estimation of breeding values in animals for young animals from DNA samp...

  10. Length of gestation periods of horses and ponies belonging to different breeds

    NARCIS (Netherlands)

    Bos, H.; Mey, G.J.W. van der

    1980-01-01

    The mean gestation periods of mares belonging to different horse and pony breeds common in The Netherlands have been calculated using data from the birth registers of five stud-book societies. The following mean values have been determined: Fjord pony: 342.2; Haflinger pony: 341.3; Draught horse: 34

  11. Brent goose colonies near snowy owls: Internest distances in relation to breeding arctic fox densities

    NARCIS (Netherlands)

    Kharitonov, S.P.; Ebbinge, B.S.; Fouw, de J.

    2013-01-01

    It was shown that in the years when the numbers of the Arctic foxes are high, even though the lemming numbers are high as well, Brent geese nest considerably closer to owls' nests than in the years with low Arctic fox numbers. At values of the Arctic fox densities greater than one breeding pair per

  12. Haploids: Constraints and opportunities in plant breeding.

    Science.gov (United States)

    Dwivedi, Sangam L; Britt, Anne B; Tripathi, Leena; Sharma, Shivali; Upadhyaya, Hari D; Ortiz, Rodomiro

    2015-11-01

    The discovery of haploids in higher plants led to the use of doubled haploid (DH) technology in plant breeding. This article provides the state of the art on DH technology including the induction and identification of haploids, what factors influence haploid induction, molecular basis of microspore embryogenesis, the genetics underpinnings of haploid induction and its use in plant breeding, particularly to fix traits and unlock genetic variation. Both in vitro and in vivo methods have been used to induce haploids that are thereafter chromosome doubled to produce DH. Various heritable factors contribute to the successful induction of haploids, whose genetics is that of a quantitative trait. Genomic regions associated with in vitro and in vivo DH production were noted in various crops with the aid of DNA markers. It seems that F2 plants are the most suitable for the induction of DH lines than F1 plants. Identifying putative haploids is a key issue in haploid breeding. DH technology in Brassicas and cereals, such as barley, maize, rice, rye and wheat, has been improved and used routinely in cultivar development, while in other food staples such as pulses and root crops the technology has not reached to the stage leading to its application in plant breeding. The centromere-mediated haploid induction system has been used in Arabidopsis, but not yet in crops. Most food staples are derived from genomic resources-rich crops, including those with sequenced reference genomes. The integration of genomic resources with DH technology provides new opportunities for the improving selection methods, maximizing selection gains and accelerate cultivar development. Marker-aided breeding and DH technology have been used to improve host plant resistance in barley, rice, and wheat. Multinational seed companies are using DH technology in large-scale production of inbred lines for further development of hybrid cultivars, particularly in maize. The public sector provides support to

  13. MARKER ASSISTED SELECTION IN DISEASE RESISTANCE BREEDING

    Directory of Open Access Journals (Sweden)

    Narasimhulu Ragimekula

    2013-08-01

    Full Text Available Feeding ever-increasing population is the main challenge faced by the agricultural scientists and to meet this plant breeders have to put continuous efforts to develop new crop varieties on fast track basis. DNA based polymorphism, commonly known as DNA markers can be used for genetic improvement through selection for favourable traits such as disease resistance. Molecular markers are becoming an essential component in backcross breeding programs for tracking the resistance genes in gene pyramiding. Marker assisted selection (MAS, is expected to increase genetic response by affecting efficiency and accuracy of selection. Even though marker-assisted selection now plays a prominent role in the field of plant breeding, examples of successful, practical outcomes are rare. MAS, with few exceptions, has not yet delivered its expected benefits in commercial breeding. It is clear that DNA markers hold great promise, but realizing that promise remains elusive. The economic and biological constraints such as a low return of investment in small-grain cereal breeding, lack of diagnostic markers, and the prevalence of QTL-background effects hinder the broad implementation of MAS. Until complex traits can be fully dissected, the application of MAS will be limited to genes of moderate-to-large effect and to applications that do not endanger the response to conventional selection. Till then, observable phenotype will remain an important component of genetic improvement programmes, because it takes in to account the collective effect of all genes. In future, chip-based, high-throughput genotyping platforms and the introduction of genomic selection will reduce the current problems of integrating MAS in practical breeding programs and open new avenues for a molecular-based resistance breeding.

  14. Plant Breeding and Genetics Newsletter, No. 32, January 2014

    International Nuclear Information System (INIS)

    in-kind support. Please be reminded that these Laboratories are your laboratories, belonging to and serving the Member States. Initiation of mutation breeding in coffee: coffee is one of the world's largest export commodities and in terms of monetary value is only exceeded by crude oil. Statistical figures suggest that the income of 1 in 70 people in the world is directly or indirectly dependent upon coffee production (Cocoa Research Institute of Nigeria, CRIN). Coffee is a neglected crop in terms of plant mutation breeding, partly because no protocols for mutation induction in coffee are available. The CRIN is interested in developing mutation breeding of coffee to combat problems in the crop, such as biennial fruiting, low yield, high caffeine content and disease resistance, especially coffee leaf rust. This is a prime example of Member States driving our adaptive R and D. Recently Guatemala and Mexico joined with a request to combat coffee leaf rust using mutation techniques

  15. INFLUENCE OF BREED ON CARCASS CUTS COMPOSITION

    OpenAIRE

    Silvester Žgur; Marko Čepon

    2000-01-01

    Carcass from 260 Simmental and 159 Brown bulls were dissected first to different cuts (chuck, shoulder, front shank, rib roast, back, loin, tenderloin, brisket, rib, flank, leg and hind shank) and then to lean, fat, tendon and bone. The comparison between two breeds was made at 12.5 % carcass fat. Simmental breed had statistically significantly higher share of leg and brisket with rib and lower share of chuck, front and hind shank, rib roast, tenderloin and flank, with higher lean and lower b...

  16. Biotechnology Assisted Wheat Breeding for Organic Agriculture

    DEFF Research Database (Denmark)

    Steffan, Philipp Matthias

    markers for common bunt resistance may potentially help to speed up resistance breeding by shortening the long time required for phenotypic disease screening. Here, we report the results of 1. an association mapping study for common bunt resistance, 2. a QTL mapping study for the localization of common...... model identified two novel QTL for common bunt resistance located on wheat chromosomes 2B and 7 A. The identification of new resistance loci may help to broaden our understanding of common bunt resistance in wheat, and QTL may potentially be exploited by marker assisted selection in plant breeding. QTL...

  17. Estimating superpopulation size and annual probability of breeding for pond-breeding salamanders

    Science.gov (United States)

    Kinkead, K.E.; Otis, D.L.

    2007-01-01

    It has long been accepted that amphibians can skip breeding in any given year, and environmental conditions act as a cue for breeding. In this paper, we quantify temporary emigration or nonbreeding probability for mole and spotted salamanders (Ambystoma talpoideum and A. maculatum). We estimated that 70% of mole salamanders may skip breeding during an average rainfall year and 90% may skip during a drought year. Spotted salamanders may be more likely to breed, with only 17% avoiding the breeding pond during an average rainfall year. We illustrate how superpopulations can be estimated using temporary emigration probability estimates. The superpopulation is the total number of salamanders associated with a given breeding pond. Although most salamanders stay within a certain distance of a breeding pond for the majority of their life spans, it is difficult to determine true overall population sizes for a given site if animals are only captured during a brief time frame each year with some animals unavailable for capture at any time during a given year. ?? 2007 by The Herpetologists' League, Inc.

  18. Analysis of Plant Breeding on Hadoop and Spark

    Directory of Open Access Journals (Sweden)

    Shuangxi Chen

    2016-01-01

    Full Text Available Analysis of crop breeding technology is one of the important means of computer-assisted breeding techniques which have huge data, high dimensions, and a lot of unstructured data. We propose a crop breeding data analysis platform on Spark. The platform consists of Hadoop distributed file system (HDFS and cluster based on memory iterative components. With this cluster, we achieve crop breeding large data analysis tasks in parallel through API provided by Spark. By experiments and tests of Indica and Japonica rice traits, plant breeding analysis platform can significantly improve the breeding of big data analysis speed, reducing the workload of concurrent programming.

  19. Accuracy of genomic selection for age at puberty in a multi-breed population of tropically adapted beef cattle.

    Science.gov (United States)

    Farah, M M; Swan, A A; Fortes, M R S; Fonseca, R; Moore, S S; Kelly, M J

    2016-02-01

    Genomic selection is becoming a standard tool in livestock breeding programs, particularly for traits that are hard to measure. Accuracy of genomic selection can be improved by increasing the quantity and quality of data and potentially by improving analytical methods. Adding genotypes and phenotypes from additional breeds or crosses often improves the accuracy of genomic predictions but requires specific methodology. A model was developed to incorporate breed composition estimated from genotypes into genomic selection models. This method was applied to age at puberty data in female beef cattle (as estimated from age at first observation of a corpus luteum) from a mix of Brahman and Tropical Composite beef cattle. In this dataset, the new model incorporating breed composition did not increase the accuracy of genomic selection. However, the breeding values exhibited slightly less bias (as assessed by deviation of regression of phenotype on genomic breeding values from the expected value of 1). Adding additional Brahman animals to the Tropical Composite analysis increased the accuracy of genomic predictions and did not affect the accuracy of the Brahman predictions. PMID:26490440

  20. Evaluation of mating systems involving five breeds for integrated beef production systems: IV. Accounting for variability and genetic trends.

    Science.gov (United States)

    Lamb, M A; Tess, M W; Robison, O W

    1993-03-01

    Computer models were used to simulate integrated cow-calf-feedlot production systems. Angus (A), Charolais (C), Hereford (H), Limousin (L), and Simmental (S) purebreds and two- and three-breed rotational crossbreds were included. Models were deterministic and based on data reported primarily from the 1970s. Variation in carcass weights were determined to predict distributions of carcass weights and values for 272- to 318-kg carcasses. Data were updated to a 1984 base by increasing birth, weaning, yearling, and mature weights to account for genetic trends within breeds. Two slaughter end points were considered: 288-kg carcass weight and low Choice grade. At low Choice grade, accounting for variation in carcass weights around the 272- to 318-kg target weight increased the estimated efficiency of A and AH crosses (input costs/carcass value), whereas at the 288-kg end point, efficiency rankings among other breed combinations were relatively unchanged. Including genetic trends resulted in increased estimated efficiencies among breed combinations with previously underweight carcasses at low Choice (A and AH), measured either as input costs/carcass weight or lean weight values. Within breeds, accounting for genetic trends and variation for weights caused breeds to be ranked differently when evaluated at low Choice.

  1. Costs Associated with Equine Breeding in Kentucky

    Science.gov (United States)

    Walker, Cassandra L.

    There were approximately 9 million horses in the United States having a 102 billion impact on the U.S. economy (AHC, 2005). Over 1 million of those horses were involved in the breeding sector. In Kentucky, nearly 18% of the horse population have been involved in breeding. Managing an equine enterprise can be difficult, particularly given that many who undertake such endeavors do not have a background or education in business management. Kentucky Cooperative Extension has produced interactive spreadsheets to help horse owners better understand the costs associated with owning horses or managing certain equine businesses, including boarding and training operations. However, there has been little support for breeders. Therefore, the objectives of this study were to provide owners with a list of services offered for breeding and the costs associated with those services. Survey questions were created from a list of topics pertinent to equine breeding and from that list of questions, an electronic survey was created. The survey was sent via Qualtrics Survey Software to collect information on stallion and mare management costs as well as expenses related to owning and breeding. Question topics included veterinary and housing costs, management and advertising expenses, and membership fees. A total of 78 farms were selected from the 2013 breeder's listings for the Kentucky Quarter Horse Association (n = 39) and the Kentucky Thoroughbred Farm Managers' Club (n = 26), and other breed association contacts (n = 13). These farms were selected from the lists by outside individuals who were not related to the project. Participants were asked to answer all questions relevant to the farm. After the initial survey distribution, follow-up e-mails and phone calls were conducted in order to answer any questions participants might have had about the survey. Survey response rate was 32.1% (25 of 78 surveys returned). Farms in Kentucky had an average of two farm-owned and two outside

  2. Plant cultivars derived from mutation induction or the use of induced mutants in cross breeding

    International Nuclear Information System (INIS)

    Since 1969 we have collected information on cultivated varieties of plants, developed by using induced mutations. Whenever we learn about a cultivar presumably derived from an induced mutant or from use of mutants in crosses. we mail a questionnaire to the breeder. The information gathered in this way is stored in our file on ''Mutant Varieties''. Excerpts are published regularly in the form of a list in the FAO/IAEA Mutation Breeding Newsletter. Our mutant variety list has repeatedly provided a basis for analyses on the value and prospects of mutation breeding

  3. Chronological age and breed-type effects on carcass characteristics and palatability of bull beef.

    Science.gov (United States)

    Riley, R R; Smith, G C; Cross, H R; Savell, J W; Long, C R; Cartwright, T C

    1986-01-01

    Bulls (n = 115) of four slaughter ages (9, 12, 15 or 18 months) and of 15 genotypes were studied. In this analysis, each bullock was assigned to one of four breed groups-British and British crosses, Brahman and Brahman crosses. Jersey and Jersey crosses or Holstein and Holstein crosses. Slaughter age had an (P Brahman-type bulls had higher shear force values (P Brahman-type carcasses were assigned the lowest numerical ratings for juiciness. Breed-type had a greater effect on tenderness of bull beef than did chronological age.

  4. Contribution of microsatellites markers in the clarification of the origin, genetic risk factors, and implications for conservation of Tunisian native sheep breeds.

    Science.gov (United States)

    Ben Sassi-Zaidy, Y; Maretto, F; Charfi-Cheikhrouha, F; Mohamed-Brahmi, A; Cassandro, M

    2016-03-11

    The genetic diversity and genetic relationship of the two main groups of African sheep, thin-tailed and fat-tailed sheep, represented by the indigenous Tunisian sheep breeds "Barbarine" (BAR, fat-tailed) and "Queue Fine de l'Ouest" (QFO, thin-tailed) were investigated. The genotypes of 110 animals belonging to these two breeds and their crossbreed (CRO) were assessed using 17 microsatellite markers. The results showed high levels of genetic diversity and a total of 256 alleles were identified in the whole population. The mean values of observed and expected heterozygosity were 0.719 and 0.789, respectively, and the mean allelic richness estimate was 10.89. The average FIS (0.112) and FIT (0.118) values over all loci indicated a notable level of inbreeding within the whole population. However, the FST value (0.007) showed a low level of genetic differentiation between these two native breeds. The high level of both gene flow and molecular coancestry coefficient detected between the two breeds and their CRO revealed an old miscegenation between the BAR and QFO breeds. The clustering analysis performed with the STRUCTURE software confirmed gene flow between these two breeds. Results arising from this study provide evidence regarding the genetic structure and variability of the two main local sheep breeds, and the implications of their actual management, which indicates the need for an urgent conservation strategy in order to prevent significant gene flow and preserve the remaining breed specificity for future generations.

  5. Contribution of microsatellites markers in the clarification of the origin, genetic risk factors, and implications for conservation of Tunisian native sheep breeds.

    Science.gov (United States)

    Ben Sassi-Zaidy, Y; Maretto, F; Charfi-Cheikhrouha, F; Mohamed-Brahmi, A; Cassandro, M

    2016-01-01

    The genetic diversity and genetic relationship of the two main groups of African sheep, thin-tailed and fat-tailed sheep, represented by the indigenous Tunisian sheep breeds "Barbarine" (BAR, fat-tailed) and "Queue Fine de l'Ouest" (QFO, thin-tailed) were investigated. The genotypes of 110 animals belonging to these two breeds and their crossbreed (CRO) were assessed using 17 microsatellite markers. The results showed high levels of genetic diversity and a total of 256 alleles were identified in the whole population. The mean values of observed and expected heterozygosity were 0.719 and 0.789, respectively, and the mean allelic richness estimate was 10.89. The average FIS (0.112) and FIT (0.118) values over all loci indicated a notable level of inbreeding within the whole population. However, the FST value (0.007) showed a low level of genetic differentiation between these two native breeds. The high level of both gene flow and molecular coancestry coefficient detected between the two breeds and their CRO revealed an old miscegenation between the BAR and QFO breeds. The clustering analysis performed with the STRUCTURE software confirmed gene flow between these two breeds. Results arising from this study provide evidence regarding the genetic structure and variability of the two main local sheep breeds, and the implications of their actual management, which indicates the need for an urgent conservation strategy in order to prevent significant gene flow and preserve the remaining breed specificity for future generations. PMID:26985949

  6. The Effects of Age, Breed, Sire, Body Weight and the Ejaculate Characteristics of Rabbit Bucks

    Directory of Open Access Journals (Sweden)

    G.N. Akpa

    2012-06-01

    Full Text Available The aim of this research is to analyse the semen of different breeds of rabbits and to determine the effects of age, breed, sire, generation and body weight on the ejaculate characteristics of rabbit bucks. Twenty rabbit bucks comprising of three breeds (New-Zealand White 8, Chinchilla 6 and Californian White 6 between the ages of 6-9 months were used to investigate the effect of age, breed, sire and generation on body weight and ejaculate characteristics of the bucks. The experiment was carried out at the Animal Science departmental farm, Ahmadu Bello University, Zaria. Parameters considered include semen colour, semen volume, semen ejaculate volume, semen concentration, semen pH, sperm motility, body weight and age. The mean for semen ejaculate volume, semen concentration, pH, sperm motility, body weight and age were 0.5 mL, 325.5x106 sperm cells/mL, 7.5, 86.6, 2.0 and 7.6% months, respectively. Age, breed and sire had (p≤0.05 effect on ejaculate characteristics but breed and sire had higher significant (p<0.01 effect on body weight. However, generation had no significant effect on the body weight and ejaculate characteristics except on semen pH (p<0.05. The ejaculate characteristics of the rabbit bucks were influenced by age, breed and sire. The values obtained were within the normal standards for rabbits-bucks. New Zealand White bucks proved superior in terms of ejaculate characteristics.

  7. Differential Gene Expression across Breed and Sex in Commercial Pigs Administered Fenbendazole and Flunixin Meglumine.

    Directory of Open Access Journals (Sweden)

    Jeremy T Howard

    Full Text Available Characterizing the variability in transcript levels across breeds and sex in swine for genes that play a role in drug metabolism may shed light on breed and sex differences in drug metabolism. The objective of the study is to determine if there is heterogeneity between swine breeds and sex in transcript levels for genes previously shown to play a role in drug metabolism for animals administered flunixin meglumine or fenbendazole. Crossbred nursery female and castrated male pigs (n = 169 spread across 5 groups were utilized. Sires (n = 15 of the pigs were purebred Duroc, Landrace, Yorkshire or Hampshire boars mated to a common sow population. Animals were randomly placed into the following treatments: no drug (control, flunixin meglumine, or fenbendazole. One hour after the second dosing, animals were sacrificed and liver samples collected. Quantitative Real-Time PCR was used to measure liver gene expression of the following genes: SULT1A1, ABCB1, CYP1A2, CYP2E1, CYP3A22 and CYP3A29. The control animals were used to investigate baseline transcript level differences across breed and sex. Post drug administration transcript differences across breed and sex were investigated by comparing animals administered the drug to the controls. Contrasts to determine fold change were constructed from a model that included fixed and random effects within each drug. Significant (P-value <0.007 basal transcript differences were found across breeds for SULT1A1, CYP3A29 and CYP3A22. Across drugs, significant (P-value <0.0038 transcript differences existed between animals given a drug and controls across breeds and sex for ABCB1, PS and CYP1A2. Significant (P <0.0038 transcript differences across breeds were found for CYP2E1 and SULT1A1 for flunixin meglumine and fenbendazole, respectively. The current analysis found transcript level differences across swine breeds and sex for multiple genes, which provides greater insight into the relationship between flunixin

  8. Differential Gene Expression across Breed and Sex in Commercial Pigs Administered Fenbendazole and Flunixin Meglumine

    Science.gov (United States)

    Howard, Jeremy T.; O’Nan, Audrey T.; Maltecca, Christian; Baynes, Ronald E.; Ashwell, Melissa S.

    2015-01-01

    Characterizing the variability in transcript levels across breeds and sex in swine for genes that play a role in drug metabolism may shed light on breed and sex differences in drug metabolism. The objective of the study is to determine if there is heterogeneity between swine breeds and sex in transcript levels for genes previously shown to play a role in drug metabolism for animals administered flunixin meglumine or fenbendazole. Crossbred nursery female and castrated male pigs (n = 169) spread across 5 groups were utilized. Sires (n = 15) of the pigs were purebred Duroc, Landrace, Yorkshire or Hampshire boars mated to a common sow population. Animals were randomly placed into the following treatments: no drug (control), flunixin meglumine, or fenbendazole. One hour after the second dosing, animals were sacrificed and liver samples collected. Quantitative Real-Time PCR was used to measure liver gene expression of the following genes: SULT1A1, ABCB1, CYP1A2, CYP2E1, CYP3A22 and CYP3A29. The control animals were used to investigate baseline transcript level differences across breed and sex. Post drug administration transcript differences across breed and sex were investigated by comparing animals administered the drug to the controls. Contrasts to determine fold change were constructed from a model that included fixed and random effects within each drug. Significant (P-value <0.007) basal transcript differences were found across breeds for SULT1A1, CYP3A29 and CYP3A22. Across drugs, significant (P-value <0.0038) transcript differences existed between animals given a drug and controls across breeds and sex for ABCB1, PS and CYP1A2. Significant (P <0.0038) transcript differences across breeds were found for CYP2E1 and SULT1A1 for flunixin meglumine and fenbendazole, respectively. The current analysis found transcript level differences across swine breeds and sex for multiple genes, which provides greater insight into the relationship between flunixin meglumine and

  9. Potential impacts of climatic change on European breeding birds.

    Directory of Open Access Journals (Sweden)

    Brian Huntley

    Full Text Available BACKGROUND: Climatic change is expected to lead to changes in species' geographical ranges. Adaptation strategies for biodiversity conservation require quantitative estimates of the magnitude, direction and rates of these potential changes. Such estimates are of greatest value when they are made for large ensembles of species and for extensive (sub-continental or continental regions. METHODOLOGY/PRINCIPAL FINDINGS: For six climate scenarios for 2070-99 changes have been estimated for 431 European breeding bird species using models relating species' distributions in Europe to climate. Mean range centroid potentially shifted 258-882 km in a direction between 341 degrees (NNW and 45 degrees (NE, depending upon the climate scenario considered. Potential future range extent averaged 72-89% of the present range, and overlapped the present range by an average of 31-53% of the extent of the present range. Even if potential range changes were realised, the average number of species breeding per 50x50 km grid square would decrease by 6.8-23.2%. Many species endemic or near-endemic to Europe have little or no overlap between their present and potential future ranges; such species face an enhanced extinction risk as a consequence of climatic change. CONCLUSIONS/SIGNIFICANCE: Although many human activities exert pressures upon wildlife, the magnitude of the potential impacts estimated for European breeding birds emphasises the importance of climatic change. The development of adaptation strategies for biodiversity conservation in the face of climatic change is an urgent need; such strategies must take into account quantitative evidence of potential climatic change impacts such as is presented here.

  10. Genetic analysis in the Collaborative Cross breeding population

    Energy Technology Data Exchange (ETDEWEB)

    Philip, Vivek [University of Tennessee, Knoxville (UTK); Sokoloff, Greta [ORNL; Ackert-Bicknell, Cheryl [Jackson Laboratory, The, Bar Harbor, ME; Striz, Martin [University of Kentucky, Lexington; Branstetter, Lisa R [ORNL; Beckmann, Melissa [ORNL; Spence, Jason S [ORNL; Jackson, Barbara L [ORNL; Galloway, Leslie D [ORNL; Barker, Gene [ORNL; Wymore, Ann M [Oak Ridge National Laboratory (ORNL); Hunsicker, Patricia R [ORNL; Durtschi, David W [University of Kentucky, Lexington; Shaw, Ginger S [University of Kentucky, Lexington; Shinpock, Sarah G [ORNL; Manly, Kenneth F [University of Kentucky, Lexington; Miller, Darla R [ORNL; Donahue, Kevin [University at Buffalo, NY; Culiat, Cymbeline T [ORNL; Churchill, Gary A [Jackson Laboratory, The, Bar Harbor, ME; Lariviere, William R [University of Pittsburgh; Palmer, Abraham [University of Chicago; O' Hara, Bruce [University of Kentucky; Voy, Brynn H [ORNL; Chesler, Elissa J [ORNL

    2011-01-01

    Genetic reference populations in model organisms are critical resources for systems genetic analysis of disease related phenotypes. The breeding history of these inbred panels may influence detectable allelic and phenotypic diversity. The existing panel of common inbred strains reflects historical selection biases, and existing recombinant inbred panels have low allelic diversity. All such populations may be subject to consequences of inbreeding depression. The Collaborative Cross (CC) is a mouse reference population with high allelic diversity that is being constructed using a randomized breeding design that systematically outcrosses eight founder strains, followed by inbreeding to obtain new recombinant inbred strains. Five of the eight founders are common laboratory strains, and three are wild-derived. Since its inception, the partially inbred CC has been characterized for physiological, morphological, and behavioral traits. The construction of this population provided a unique opportunity to observe phenotypic variation as new allelic combinations arose through intercrossing and inbreeding to create new stable genetic combinations. Processes including inbreeding depression and its impact on allelic and phenotypic diversity were assessed. Phenotypic variation in the CC breeding population exceeds that of existing mouse genetic reference populations due to both high founder genetic diversity and novel epistatic combinations. However, some focal evidence of allele purging was detected including a suggestive QTL for litter size in a location of changing allele frequency. Despite these inescapable pressures, high diversity and precision for genetic mapping remain. These results demonstrate the potential of the CC population once completed and highlight implications for development of related populations. Supplementary material consists of Supplementary Table 1 Phenotypic means, variances, ranges and heritabilities for all traits and generations, Supplementary Table

  11. Optimization of Swine Breeding Programs Using Genomic Selection with ZPLAN.

    Science.gov (United States)

    Lopez, B M; Kang, H S; Kim, T H; Viterbo, V S; Kim, H S; Na, C S; Seo, K S

    2016-05-01

    The objective of this study was to evaluate the present conventional selection program of a swine nucleus farm and compare it with a new selection strategy employing genomic enhanced breeding value (GEBV) as the selection criteria. The ZPLAN+ software was employed to calculate and compare the genetic gain, total cost, return and profit of each selection strategy. The first strategy reflected the current conventional breeding program, which was a progeny test system (CS). The second strategy was a selection scheme based strictly on genomic information (GS1). The third scenario was the same as GS1, but the selection by GEBV was further supplemented by the performance test (GS2). The last scenario was a mixture of genomic information and progeny tests (GS3). The results showed that the accuracy of the selection index of young boars of GS1 was 26% higher than that of CS. On the other hand, both GS2 and GS3 gave 31% higher accuracy than CS for young boars. The annual monetary genetic gain of GS1, GS2 and GS3 was 10%, 12%, and 11% higher, respectively, than that of CS. As expected, the discounted costs of genomic selection strategies were higher than those of CS. The costs of GS1, GS2 and GS3 were 35%, 73%, and 89% higher than those of CS, respectively, assuming a genotyping cost of $120. As a result, the discounted profit per animal of GS1 and GS2 was 8% and 2% higher, respectively, than that of CS while GS3 was 6% lower. Comparison among genomic breeding scenarios revealed that GS1 was more profitable than GS2 and GS3. The genomic selection schemes, especially GS1 and GS2, were clearly superior to the conventional scheme in terms of monetary genetic gain and profit. PMID:26954222

  12. Development and application of biological technologies in fish genetic breeding.

    Science.gov (United States)

    Xu, Kang; Duan, Wei; Xiao, Jun; Tao, Min; Zhang, Chun; Liu, Yun; Liu, ShaoJun

    2015-02-01

    Fish genetic breeding is a process that remolds heritable traits to obtain neotype and improved varieties. For the purpose of genetic improvement, researchers can select for desirable genetic traits, integrate a suite of traits from different donors, or alter the innate genetic traits of a species. These improved varieties have, in many cases, facilitated the development of the aquaculture industry by lowering costs and increasing both quality and yield. In this review, we present the pertinent literatures and summarize the biological bases and application of selection breeding technologies (containing traditional selective breeding, molecular marker-assisted breeding, genome-wide selective breeding and breeding by controlling single-sex groups), integration breeding technologies (containing cross breeding, nuclear transplantation, germline stem cells and germ cells transplantation, artificial gynogenesis, artificial androgenesis and polyploid breeding) and modification breeding technologies (represented by transgenic breeding) in fish genetic breeding. Additionally, we discuss the progress our laboratory has made in the field of chromosomal ploidy breeding of fish, including distant hybridization, gynogenesis, and androgenesis. Finally, we systematically summarize the research status and known problems associated with each technology.

  13. Valores normais da densidade mineral óssea do acessório do carpo em eqüinos da raça Brasileiro de Hipismo (BH determinados por meio da densitometria óptica em imagem radiográfica Normal values of bone mineral density of the accessory carpus bone in Brasileiro de Hipismo (BH horse breed using optical densitometry in radiographic image

    Directory of Open Access Journals (Sweden)

    Carmen Lice Buchmann de Godoy

    2005-06-01

    Full Text Available Com o objetivo de estabelecer os valores normais da densidade mineral óssea (DMO em milímetros de alumínio (mmAl de eqüinos da raça Brasileiro de Hipismo (BH, foi radiografado o osso acessório do carpo de animais desta raça e aplicada a técnica da densitometria óptica em imagem radiográfica (DOR. Foram utilizados animais de 20 a 30 meses de idade, sendo 12 machos e 12 fêmeas. A DMO média foi de 4,7 ± 0,1mmAl para os machos e de 4,6 ± 0,1mmAl para as fêmeas, não sendo significativa a diferença entre estes valores.Physiologic values of the bone mineral density (BMD of the accessory carpal bone in Brasileiro de Hipismo (BH horse breed were determined by radiographic optic densitometry (ROD, expressed in milimiters of alumminun (mmAl. Lateromedial radiographs of the carpus were taken from 12 intact males and 12 females, from 20 and up to 30 months of age. No significant difference was found in the average mineral bone density of the accessory carpal bone between males (4.7 ± 0.1mmAl and females (4.6 ± 0.1mmAl from 20 to 30 months of age.

  14. Breeding objectives for sheep should be customised depending on variation in pasture growth across years.

    Science.gov (United States)

    Rose, G; Mulder, H A; Thompson, A N; van der Werf, J H J; van Arendonk, J A M

    2015-08-01

    Breeding programmes for livestock require economic weights for traits that reflect the most profitable animal in a given production system, which affect the response in each trait after selection. The profitability of sheep production systems is affected by changes in pasture growth as well as grain, meat and wool prices between seasons and across years. Annual pasture growth varies between regions within Australia's Mediterranean climate zone from low growth with long periods of drought to high growth with shorter periods of drought. Therefore, the objective of this study was to assess whether breeding objectives need to be adapted for regions, depending on how reliable the pasture growth is across years. We modelled farms with Merino sheep bred for wool and meat in 10 regions in Western Australia. Across these 10 regions, mean annual pasture growth decreased, and the CV of annual pasture growth increased as pasture growth for regions became less reliable. We calculated economic values for nine traits, optimising management across 11 years, including variation for pasture growth and wool, meat and grain prices between and within years from 2002 to 2012. These economic values were used to calculate responses to selection for each trait for the 10 regions. We identified two potential breeding objectives, one for regions with low or high reliability and the other for regions with medium reliability of pasture growth. Breeding objectives for high or low pasture growth reliability had more emphasis on live weight traits and number of lambs weaned. Breeding objectives for medium reliability of pasture growth had more emphasis on decreasing fibre diameter. Relative economic weights for fleece weight did not change across the regions. Regions with low or high pasture reliability had similar breeding objectives and response to selection, because the relationship between the economic values and CV of pasture growth were not linear for live weight traits and the number of

  15. Validating selective breeding approaches for disease resistance

    Science.gov (United States)

    Selective breeding of rainbow trout at the USDA/ARS National Center for Cool and Cold Water Aquaculture (NCCCWA) in Leetown, West Virginia is designed to accomplish four goals: 1) define commercially important traits such as disease resistance, growth rate, stress response, and feed efficiency; 2) d...

  16. Artificial Breeding Techniques of Whitmania pigra

    Institute of Scientific and Technical Information of China (English)

    Zhao; Nan; Xu; Ziliang

    2014-01-01

    The artificial breeding technology for juvenile of Whitmania pigra was introduced in the paper,including selection of sites and water quality,construction of spawning pool,hatching pool and escape proof facilities,key technology of leech selection,feeding,cocoon hatching,juvenile feeding and management.

  17. Plant Breeding by Using Radiation Mutation

    Energy Technology Data Exchange (ETDEWEB)

    Kang, Si Yong; Kim, Dong Sub; Lee, Geung Joo (and others)

    2007-06-15

    A mutation breeding is to use physical or chemical mutagens to induce mutagenesis, followed by individual selections with favorable traits. The mutation breeding has many advantages over other breeding methods, which include the usefulness for improving one or two inferior characteristics, applications to broad species with different reproductive systems or to diverse plant materials, native or plant introduction with narrow genetic background, time and cost-effectiveness, and valuable mutant resources for genomic researches. Recent applications of the radiation breeding techniques to developments of flowering plants or food crops with improved functional constituents heightened the public's interests in agriculture and in our genetic resources and seed industries. The goals of this project, therefore, include achieving advances in domestic seed industries and agricultural productivities by developing and using new radiation mutants with favored traits, protecting an intellectual property right of domestic seeds or germplasm, and sharing the valuable mutants and mutated gene information for the genomic and biotech researches that eventually leads to economic benefits.

  18. Marketing Potential of Advanced Breeding Clones

    Science.gov (United States)

    The accumulation of reducing sugars during cold storage of potato tubers is a serious and costly problem for producers and processors. The degree to which cultivars accumulate reducing sugars during storage determines their processing and market potential. Cultivars or advanced breeding lines with...

  19. Evaluation of charge breeding options for EURISOL

    CERN Document Server

    Delahaye, P; Lamy, T; Marie-Jeanne, M; Kester, O; Wenander, F

    2010-01-01

    A comprehensive study of charge breeding techniques for the most ambitious ISOL-facility project, EURISOL, is presented here. It is based on results obtained during the past years at CERN-ISOLDE and LPSC Grenoble with charge breeders of both ECR and EBIS types.

  20. MODELING REGIONAL SYSTEMS OF BREEDING PIGS

    Directory of Open Access Journals (Sweden)

    Svinarev I. Y.

    2015-12-01

    Full Text Available The article contains the experience of the development of the methodology and the computer program for calculation of regional and local systems of pigs hybridization at the example of the Rostov region (Russia. Crossing the GP lines for F1 should be organized in multiplier farm, which may be separate farms and to be part of large commercial farms. For the production of F1 in a multiplier farm, we must breed a purebred specialized paternal and a maternal line, selected on the effect of combining ability. For the successful functioning of the system of hybridization, it is necessary to build a genetic pyramid, including breeding and genetic centers (nucleus farm, multiplier farm, reproducing the baseline. The article gives a detailed calculation of sow population of levels of P, GP, GGP for maternal and paternal breeds of pigs. The program uses user-defined parameters of pigs productivity, of the simulated population, and the parameters characterizing the intensity of selection of young animals. To ensure annual production of 1,822 million pigs in the Rostov region it is necessary to provide the availability of brood stock in the amount of 89 thousand heads, 6 800 heads in the structure of grandparent flocks (GP, 730 heads in the structure of the Grand-Grand-parent stock (GGP, excluding sows second maternal and paternal breeds

  1. Rapid cyling plant breeding in citrus

    Science.gov (United States)

    Resistance or tolerance to huanglongbing (HLB) and other important traits have been identified in several citrus types and relatives and associated markers should be identified soon. What is urgently needed in addition is an accelerated strategy for citrus variety breeding. Identification and use of...

  2. San Diego Zoo:Success in Breeding

    Institute of Scientific and Technical Information of China (English)

    2010-01-01

    Giant pandas have become very popular in U.S.zoos. One in particular, the San Diego Zoo, has been extremely successful at making the pandas feel at home and getting them to breed. In 1999, it became home tothe first surviving panda cub born in the United States.

  3. Breeding System of Ruellia succulenta Small (Acanthaceae)

    Science.gov (United States)

    This study examines the breeding system of Ruellia succulenta (Acanthaceae), an herbaceous perennial found in the pine rockland habitat of southern Florida. Hand pollination treatments were performed on 75 plants, 25 from each of three sites. Treatments applied to test plants included: 1) control ...

  4. Computerized management support for swine breeding farms.

    NARCIS (Netherlands)

    Huirne, R.B.M.

    1990-01-01

    1. INTRODUCTIONThe investigations described in this thesis have been directed towards computerized management support for swine breeding farms, focused on sow productivity and profitability. The study is composed of three basic parts: (1) basic description and definition of farm man

  5. Breeding lettuce for fresh-cut processing

    Science.gov (United States)

    Lettuce is increasingly consumed in fresh-cut packaged salads. New cultivars specifically bred for this use can enhance production and processing efficiency and extend shelf life. Cultivars with novel head architectures and leaf traits are being released by private and public breeding programs with ...

  6. Plant breeding and genetics newsletter. No. 13

    International Nuclear Information System (INIS)

    This issue reports on the creation of the Agency's Subprogramme of Sustainable Intensification of Crop Production Systems (E1) through the merger of the Soils and Plant Breeding and Genetics Subprogrammes together with part of the Entomology Subprogramme activities. Implementation of a new Coordinated Research Project (CRP) on the Effects of Mutagenic Agents on the DNA Sequence in Plants, and the successful submission of a new CRP proposal on Pyramiding of Mutated Genes Contributing to Crop Quality and Resistance to Stress Affecting Quality were among the major activities of our Subprogramme during the last six months. We actively participated in the International Year of Rice (IYR 2004) events such as the Meeting of the Informal International Working Group on the International Year of Rice (IIWG) and the FAO Rice Conference on Rice in Global Markets and Sustainable Production Systems (Rome, Italy), both in February this year. A lot of work has been concentrated this last semester on the preparation of Programme and Budget for the biennium 2006-2007 and the appraisal of TC proposals for the biennium 2005-2006. The Mutation Breeding Newsletter and the Mutation Breeding Review will merge to become the Mutation Breeding Newsletter and Reviews (MBN and R). Starting at the end of July, the MBN and R will appear on a regular basis

  7. Impact of mutation breeding in rice

    International Nuclear Information System (INIS)

    More cultivars have been developed in rice through the use of mutation breeding than in any other crop. Direct releases of mutants as cultivars began some 30 years ago, and now total 198 cultivars. During the last 20 years, increasing use has been made of induced mutants in cross-breeding programs, leading to 80 additional cultivars. Principal improvements through mutation breeding have been earlier maturity, short stature, and grain character modifications. Rice has been a popular subject of mutagenesis because it is the world's leading food crop, has diploid inheritance, and is highly self-pollinated. In recent years induced mutation has been exploited to develop breeding tool mutants, which are defined as mutants that in themselves may not have direct agronomic application but may be useful genetic tools for crop improvement. Examples include the eui gene, hull colour mutants, normal genetic male steriles, and environmentally sensitive genetic male steriles. The environmentally sensitive genetic male steriles, especially those in which male sterility can be turned on or off by different photoperiod lengths, show promise for simplifying hybrid rice seed production both in China and the USA. Future applications of mutation in rice include induction of unusual endosperm starch types, plant types with fewer but more productive tillers, dominant dwarfs, dominant genetic male steriles, extremely early maturing mutants, nutritional mutants, and in vitro-derived mutants for tolerance to herbicides or other growth stresses. Refs, 4 figs, 2 tabs

  8. Breeding and Cytogenetics in the Genus Tulipa

    NARCIS (Netherlands)

    Marasek Ciolakowska, A.R.; Ramanna, M.S.; Arens, P.; Tuyl, van J.M.

    2012-01-01

    Tulip (Tulipa) is one of the most important ornamental bulbous plants, which has been cultivated for cut flower, potted plant, garden plant and for landscaping. Species from the different sections display complementary agronomic characteristics and breeding techniques are used to combine desired fea

  9. Genetics, Genomics and Breeding in Sunflower

    Science.gov (United States)

    This book is intended to bridge traditional research with modern molecular investigations on sunflower. It begins with basic information about the sunflower plant and germplasm diversity (Chapter 1), followed by classical genetics and traditional breeding (Chapter 2), history and achievement of gen...

  10. Breeding for feed intake capacity in pigs

    NARCIS (Netherlands)

    Eissen, J.J.

    2000-01-01

    This thesis deals with feed intake capacity of pigs. By selection, breeding organizations try to achieve genetic improvement in production and reproduction efficiency. Future genetic improvement may become constrained by a limited feed intake capacity of growing pigs and lactating sows, respectively

  11. Breeding for longevity in Italian Chianina cattle

    NARCIS (Netherlands)

    Forabosco, F.

    2005-01-01

    The objective of this thesis was to evaluate genetic aspects of longevity (LPL) in the Chianina beef cattle population in order to define how to include this trait in selection criteria. The Chianina breed has been raised for over twenty-two centuries inItaly

  12. Seabird metapopulations: searching for alternative breeding habitats

    NARCIS (Netherlands)

    Schippers, P.; Snep, R.P.H.; Schotman, A.G.M.; Jochem, R.; Stienen, E.W.M.; Slim, P.A.

    2009-01-01

    Today, many seabird species nest in port areas, which are also necessary for human economic activity. In this paper, we evaluate, using a metapopulation model, the possibilities for creating alternative breeding sites for the Common Tern (Sterna hirundo) in the Rhine¿Meuse¿Scheldt estuary. We explor

  13. Plant Breeding by Using Radiation Mutation

    International Nuclear Information System (INIS)

    A mutation breeding is to use physical or chemical mutagens to induce mutagenesis, followed by individual selections with favorable traits. The mutation breeding has many advantages over other breeding methods, which include the usefulness for improving one or two inferior characteristics, applications to broad species with different reproductive systems or to diverse plant materials, native or plant introduction with narrow genetic background, time and cost-effectiveness, and valuable mutant resources for genomic researches. Recent applications of the radiation breeding techniques to developments of flowering plants or food crops with improved functional constituents heightened the public's interests in agriculture and in our genetic resources and seed industries. The goals of this project, therefore, include achieving advances in domestic seed industries and agricultural productivities by developing and using new radiation mutants with favored traits, protecting an intellectual property right of domestic seeds or germplasm, and sharing the valuable mutants and mutated gene information for the genomic and biotech researches that eventually leads to economic benefits

  14. Marketing potential of advanced breeding clones

    Science.gov (United States)

    The accumulation of reducing sugars during cold storage of potato tubers is a serious and costly problem for producers and processors. The degree to which cultivars accumulate reducing sugars during storage determines their processing and market potential. Cultivars or advanced breeding lines with...

  15. Use of prolamin electrophoresis in breeding sorghum for heterosis and in marking sorghum biotypes of value for breeding

    International Nuclear Information System (INIS)

    We attempted to predict heterosis in the grain productivity of grain sorghum using electrophoresis of the kafirin in the parental lines. The study was carried out on four sterile lines (A-83, A-342, A-458 and A-10598) and 38 pollinator lines. To select parental lines with the highest level of heterosis using electrophoresis of the proteins, a comparison was made of the kafirin banding patterns in the parental lines. The kafirin banding patterns contain components that are common to both the pollinator and the maternal lines, and those that are specific only to the pollinators but are missing in the maternal lines. This made it possible to divide the pollinators into four groups that differ from the sterile lines according to their kafirin banding patterns. The first group comprised pollinators with a pattern that was identical to that of the maternal line (nine accessions); the second group contained eight accessions; the third, 12 accessions; and the fourth, nine accessions, with bands 1, 2 and 3 of the electrophoretic patterns absent in the maternal lines. As a result, a positive relationship was found between the degree of difference in parental banding patterns and the level of heterosis in hybrids. 1 fig

  16. Future breeding for organic and low-input agriculture: integrating values and modern breeding tools for improving robustness

    NARCIS (Netherlands)

    Lammerts Van Bueren, E.

    2010-01-01

    Biologische productie, evenals de aandacht voor gewasveredeling voor de biologische landbouw, nemen in Europa nog steeds toe. De vraag die vaak gesteld wordt, is in hoeverre veredeling voor de biologische sector afwijkt van moderne gewasveredeling, en of het afwijzen van genetische modificatie ook b

  17. Breeding productivity of Smith Island black ducks

    Science.gov (United States)

    Haramis, G.M.; Jorde, D.G.; Olsen, G.H.; Stotts, D.B.; Harrison, M.K.; Perry, M.C.

    2002-01-01

    We investigated the breeding performance of American black ducks (Anas rubripes) on Smith Island, Chesapeake Bay, to improve our understanding of island black duck breeding ecology and to make management recommendations to enhance productivity. During 1995-96, we implanted 56 female black ducks with 20-g radio transmitters and tracked 35 of the individuals through the breeding season to locate nests, determine nest fate, and identify brood habitat. We also increased preseason banding efforts and compared capture characteristics over 12 years with those from the Deal Island Wildlife Management Area, a banding site on the mainland of Tangier Sound. A low rate of nesting (37%), lack of renesting, and poor hatching success (31%) indicated that island salt marsh habitats present a harsh environment for breeding black ducks. Black ducks located 11 of 13 nests (85%) in black needlerush (Juncus roemerianus) marsh where they were vulnerable to flooding from extreme tides and to egg predators. No nests were found on forested tree hammocks, a feature that distinguishes Smith Island from nearby South Marsh and Bloodsworth Islands. Nest predators included red foxes (Vulpes vulpes), herring gulls (Larus argentams), fish crows (Corvus ossifragus), and, potentially, Norway rats (Rattus norvegicus). Unlike mainland red foxes, foxes radio tracked on Smith Island were found to be capable swimmers and effective low marsh predators. We found shoreline meadows of widgeon grass (Ruppia maritima) to be important foraging sites for black ducks and suspected that the virtual absence of fresh water in this high salinity environment (1217+ ppt) to incur some cost in terms of growth and survival of ducklings. Preseason bandings revealed a high proportion of banded adults and a strong positive correlation in age ratios with the Deal Island banding site. This latter finding strongly suggests a negative universal effect of storm tides on nest success for Tangier Sound black ducks. Management to

  18. Across Breed QTL Detection and Genomic Prediction in French and Danish Dairy Cattle Breeds

    DEFF Research Database (Denmark)

    van den Berg, Irene; Guldbrandtsen, Bernt; Hozé, C;

    Our objective was to investigate the potential benefits of using sequence data to improve across breed genomic prediction, using data from five French and Danish dairy cattle breeds. First, QTL for protein yield were detected using high density genotypes. Part of the QTL detected within breed was...... shared across breed. Second, sequence data was used to quantify the loss in prediction reliabilities that results from using genomic markers rather than the causal variants. 50, 100 or 250 causative mutations were simulated and different sets of prediction markers were used to predict genomic...... relationships at causative mutations. Prediction of genomic relationships at causative mutations was most accurate when predicted by a selective number of markers within 1 Kb of the causative mutations. Whole-genome sequence data can help to get closer to the causative mutations and therefore improve genomic...

  19. New trends in plant breeding - example of soybean

    Directory of Open Access Journals (Sweden)

    Miladinović Jegor

    2015-01-01

    Full Text Available Soybean breeding and selection is a continual process designed to increase yield levels and improve resistance to biotic and abiotic stresses. Soybean breeders have been successful in producing a large number of varieties using conventional breeding methods, the Single Seed Descent method in particular. In recent decades, with the increased use of genetic transformations, backcrossing is more frequent though the only trait that has been commercialized is glyphosate tolerance. Physiological breeding poses a particular challenge, as well as phenotyping and development of useful criteria and techniques suitable for plant breeding. Using modern remote sensing techniques provides great opportunity for collecting a large amount of physiological data in real environment, which is necessary for physiological breeding. Molecular based plant breeding methods and techniques are a conceptual part of any serious breeding program. Among those methods, the most extensively used is marker-assisted selection, as a supplement to conventional breeding methods. [Projekat Ministarstva nauke Republike Srbije, br. TR-31022

  20. BREED PREFERENCES AND EFFECTIVENESS OF BEEKEEPING IN THE SOUTH URAL

    Directory of Open Access Journals (Sweden)

    A. Mashenkov

    2012-12-01

    Full Text Available Efficiency of beekeeping is defined by breed of bees and melliferous herbs. In the conditions of sharply continental climate of South Ural, duration of success of beekeeping is provided with breed of bees.

  1. Four Square Mile Survey breeding population report for 2001

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — Production report of Four Square Mile Survey breeding population estimates for 13 species of ducks. Data includes summaries of breeding population estimates...

  2. Economic Aspects of Using Induced Mutations in Plant Breeding

    International Nuclear Information System (INIS)

    Economic aspects of mutation plant breeding are considered in relation to basic principles of mutation induction and selection, when to use mutations in plant breeding programmes and mutation breeding strategies. The following basic principles of mutation plant breeding are outlined: - A imitation is induced in a single cell and expressed in the progeny from that cell. - Expression of a mutation is influenced by its genetic nature and the breeding system of the organism. - The mutation frequency determines the number of cell progenies that have to be examined to detect a particular mutant. - Random mutations in quantitatively inherited characters generally result in an increase in variance and a shift in the mean. Mutation rates for various types of mutations have been estimated and population sizes for mutation plant breeding experiments calculated. Based upon these principles the potential for using induced mutations in plant breeding and some breeding strategies are outlined. (author)

  3. RESEARCH ON MILK PRODUCTION AT GOATS FROM CARPATHIAN BREED IN RELATION WITH BREEDING SYSTEM

    OpenAIRE

    Ion RĂDUCUŢĂ; Călin, Ion; Emilia (RĂDUCUŢĂ) ION; Carmen Georgeta NICOLAE; Monica Paula MARIN; Horia Ion PRISECEANU

    2015-01-01

    This paper aims to quantify the qualitative and quantitative parameters of milk production at goats from Carpathian breed in relation with the breeding system (extensive versus semi-intensive). To determine the total quantity of milk, the milk production control it included suckling period of kids and milking period of goats. For determining the quality of milk it was made the analysis of chemical composition of milk in the main constituents, namely water and dry matter, content of fat, prote...

  4. Breeding objectives, selection criteria and breeding system of indigenous goat types in bale zone, oromia, Ethiopia

    OpenAIRE

    Belete Asefa

    2015-01-01

    The study was undertaken in bale zone to assess farmer’s selective breeding objectives, trait preferences, selection criteria and breeding system October 2012 to November 2013. A purposive and multistage sampling technique was applied for selection of 3 district and 9 kebeles. Then 360 households were selected by using simple random sampling techniques after the list of pastoralist having goats was identified. Statistical analysis system version 9.1 was used for analysis of data. Indices, eff...

  5. Effects of breeding activity on durum wheat traits breed in Italy during the 20th century

    OpenAIRE

    Luigi Cattivelli; Natale Di Fonzo; Anna Maria Mastrangelo; Loredana Matteu; Pasquale De Vita

    2007-01-01

    Italy is the first world producer of pasta from durum wheat (Triticum durum Desf.) and an intense breeding activity has been conducted over the last century to support the long tradition of pasta making. This manuscript reviews the results achieved through the Italian breeding programs over last century. The analysis of data allows to appreciate the selective pressure imposed by the breeders on plant height and phenology to select cultivars well adapted to the Italian semi-arid conditions, wh...

  6. Taking ethics into account in farm animal breeding: what can the breeding companies achieve?

    OpenAIRE

    Olsson, I Anna S; Gamborg, Christian; Sandøe, Peter

    2006-01-01

    Animal welfare and the ethical issues it raises have been discussed intensively for a couple of decades. The emphasis has been on the direct effects of housing and husbandry, but more attention is now being given to problems originating in selective breeding. European attempts to adjust animal welfare legislation to deal with these problems have been largely unsuccessful, but the fact that selective breeding can introduce welfare problems continues to place an ethical responsibility on the an...

  7. Comparative study of fattening and slaughter traits of male Simmental breed and crosses with Charolais breed

    OpenAIRE

    Petričević M.; Aleksić S.; Petrović M.M.; Pantelić V.; Ostojić-Andrić D.; Stanišić N.; Nikšić D.

    2015-01-01

    The objective of this study was to determine the slaughter traits, conformation score and fat covering of carcass and composition of carcasses of young cattle of two genotype groups: domestic Simmental breed (A) and its crosses with Charolais breed (B). The sample included a total of 30 animals, 15 in each group. Both groups were slaughtered at final weight of about 660 kg. After the slaughtering, warm carcass sides with and without kidney fat were weighed ...

  8. Breeding for inducible resistance against insects – applied plant breeding aspects

    OpenAIRE

    Åhman, Inger

    2009-01-01

    Many of the pre-requisites necessary for breeding plants with inducible resistance to pests are no different from breeding for constitutive resistance. In both cases it is necessary to have resistance genes giving high enough yield gains from pest protection, efficient selection methods and means of introducing resistance genes into agronomically acceptable plant material. In addition, resistance traits need to be neutral or positive to non-target organisms. In inducible resistance, there is ...

  9. Factors Influencing Nest Site Selection, Breeding Density and Breeding Success in the Bearded Vulture (Gypaetus barbatus)

    OpenAIRE

    Donázar, José A.; Hiraldo, F.; Bustamante, Javier

    1993-01-01

    1. We examined the nest site selection, breeding density and breeding success in the bearded vulture Gypaetus barbatus in relation to physiography, climate, land-use and degree of human disturbance. The study area was in the Pyrenean Cordillera, Spain, where the largest European population of this species occurs. Univariate analyses and Generalized Linear Models were employed. 2. Models correctly classified the 78% of the cliffs analysed (occupied by be...

  10. Genetic Diversity of Bali Cattle Based on Microsatellite Marker in Indonesian Breeding Centre

    Directory of Open Access Journals (Sweden)

    W. A. Septian

    2015-04-01

    Full Text Available Genetics characterization in livestock based on microsatellite has been widely implemented including for Bali cattle in three different breeding centres in Indonesia. This study aimed to determine diversity of Bali cattle microsatellites in three breeding centers namely BPTU Bali cattle in Bali, BPT-HMT Serading Sumbawa in West Nusa Tenggara, and Village Breeding Center in South Sulawesi. The number of animals used in this study was 95 head of cattle consisted of 32 heads from BPTU Bali Province, 32 heads from BPT-HMT Serading Sumbawa, and 31 heads from Village Barru Breeding Center Barru distric. Microsatellite loci used to determine the diversity was the locus SPS115, INRA037, MM12, and ETH185 based on flourescently labeled fragment method. Data analysis of microsatellite in Bali cattle at three different locations was performed by using POPGEN 1.2, Cervus, and POPTREE2 programs. The results showed that microsatellite diversity in Bali cattle detected 32 alleles from three different locations, and there were specific alleles at each location. Average values of observed heterozygosity (Ho and expected heterozygosity (He were 0.418 and 0.604 respectively, while the average value of polymorphism informative content (PIC was 0.579. The Hardy-Weinberg equilibrium in general suggested that the loci used in the Bali cattle in three populations were in equilibrium, except INRA037 and ETH185. The genetic diversity between populations of Bali cattle was 0.033 (3%, while the inbreeding coefficient index in all populations was 0.296 (29.6 %. Bali cattle phylogeny tree with three populations showed that the populations of Bali cattle in BPTU Bali and VBC Barru had close genetic distance compared to the population of Bali cattle in BPT-HMT Serading Sumbawa. The results of this study provide information that the characteristics of Bali cattle breeding centers in three locations are different, so we need a directed breeding program in each population.

  11. Reproductive performance of different breeds of broiler rabbits under sub-temperate climatic conditions

    Directory of Open Access Journals (Sweden)

    D. Kumar

    2013-09-01

    Full Text Available This study was conducted to assess the effect of breed, season, age and weight of doe at mating on reproductive performance of 4 broiler rabbit breeds, Grey Giant, White Giant, Soviet Chinchilla, and New Zealand White, reared under standard management practices in sub-temperate climatic conditions of India. They were first mated at 6 to 7 mo of age, whereupon an extensive breeding system (re-mating after weaning was followed. Weaning was done 42 d after kindling. The data from the records on reproduction consisting of 503 matings and 377 kindlings were analysed. The parameters considered were fertility rate, litter size at birth (LSB, litter weight at birth (LWB, litter size at weaning (LSW, litter weight at weaning (LWW, doe weight at mating (DWM, gestation length and sex ratio. Among 4 breeds, the LSB, LWB and LSW were higher in Grey Giant followed by White Giant, Soviet Chinchilla and New Zealand White. The LSB and LSW in Grey Giant breed differed significantly (P<0.05 from Soviet Chinchilla and New Zealand White. Season had significant (P<0.05 effect on LSW with higher values during spring (5.68±0.24, followed by summer (5.29±0.30, winter (5.13±0.25 and autumn (4.17±0.49. The body weight of doe at service significantly influenced fertility. The fertility increased as body weight increased. The age of the doe at mating had a significant effect on LSW, with higher values for does more than 2 yr and less than 1 yr old compared to 1- to 2-yr old does. The parity did not affect any of the parameters studied. It is concluded that the factors studied affect the reproductive performance of rabbit does. Grey Giant breed showed the highest litter size at birth and weaning, and the highest litter size and weight at weaning was in spring.

  12. Value Investing

    OpenAIRE

    Kubínyi, Tomáš

    2010-01-01

    This bachelor's thesis deals with value investing in the form defined by Benjamin Graham. In clarifying the theoretical aspects, particular attention is given to an intrinsic value of stocks and to its calculation methods. A way to overcome the deficiencies in the two most widely used models of calculation is introduced. It is value screening, which by defining of certain criteria makes an assumption of undervalued stocks. Then the investment approach of the most successful investor, Warren B...

  13. Studies on breeding schemes in a closed pig population.

    OpenAIRE

    Roo, de, A.J.

    1988-01-01

    Size of a population in genetic terms is a function of number of male and female individuals used for breeding over a generation. A breed can be small because of a small total number of individuals but also because of a small number of individuals of one sex. According to this definition, many breeds of livestock, pets and zoo animals are small populations.Breeding scheme designed for finite populations sometimes primarily aim at conservation of animal genetic resources. In most cases, howeve...

  14. Sheep resources of Ethiopia : genetic diversity and breeding strategy

    OpenAIRE

    Gebremichael, S.

    2008-01-01

    Twenty percent of the world domestic animal breeds are classified as being “at risk” of extinction. Seventy percent of the mammalian breeds, for which no risk status data are available, are found in the developing world. This is a serious constraint to effective prioritization and planning of sustainable breed conservation measures, including sustainable breeding strategies. The objectives of this thesis were to develop improved approaches to characterization of sheep resources, and sustainab...

  15. Economic Impact Analysis of Marker-Assisted Breeding in Rice

    OpenAIRE

    Alpuerto, Vida; Norton, George W.; Alwang, Jeffrey Roger

    2008-01-01

    The benefits of developing and releasing salinity-tolerant and phosphorous-deficiency-tolerant rice in Bangladesh, India, Indonesia and the Philippines were estimated for marker-assisted breeding as compared to conventional breeding using economic surplus analysis. Marker-assisted breeding is estimated to save at least 2 to 3 years in the breeding cycle and result in incremental benefits over 25 years in the range of $300 to $800 million depending on the country, stress, and time lags. Salini...

  16. Variation in the prion protein sequence in Dutch goat breeds.

    Science.gov (United States)

    Windig, J J; Hoving, R A H; Priem, J; Bossers, A; van Keulen, L J M; Langeveld, J P M

    2016-10-01

    Scrapie is a neurodegenerative disease occurring in goats and sheep. Several haplotypes of the prion protein increase resistance to scrapie infection and may be used in selective breeding to help eradicate scrapie. In this study, frequencies of the allelic variants of the PrP gene are determined for six goat breeds in the Netherlands. Overall frequencies in Dutch goats were determined from 768 brain tissue samples in 2005, 766 in 2008 and 300 in 2012, derived from random sampling for the national scrapie surveillance without knowledge of the breed. Breed specific frequencies were determined in the winter 2013/2014 by sampling 300 breeding animals from the main breeders of the different breeds. Detailed analysis of the scrapie-resistant K222 haplotype was carried out in 2014 for 220 Dutch Toggenburger goats and in 2015 for 942 goats from the Saanen derived White Goat breed. Nine haplotypes were identified in the Dutch breeds. Frequencies for non-wild type haplotypes were generally low. Exception was the K222 haplotype in the Dutch Toggenburger (29%) and the S146 haplotype in the Nubian and Boer breeds (respectively 7 and 31%). The frequency of the K222 haplotype in the Toggenburger was higher than for any other breed reported in literature, while for the White Goat breed it was with 3.1% similar to frequencies of other Saanen or Saanen derived breeds. Further evidence was found for the existence of two M142 haplotypes, M142 /S240 and M142 /P240 . Breeds vary in haplotype frequencies but frequencies of resistant genotypes are generally low and consequently selective breeding for scrapie resistance can only be slow but will benefit from animals identified in this study. The unexpectedly high frequency of the K222 haplotype in the Dutch Toggenburger underlines the need for conservation of rare breeds in order to conserve genetic diversity rare or absent in other breeds. PMID:26991480

  17. Conservation genetics of an endangered Catalonian cattle breed ("Alberes"

    Directory of Open Access Journals (Sweden)

    J. Jordana

    1999-09-01

    Full Text Available We biochemically analyzed and characterized the genetic structure of a population in danger of extinction ,"Alberes", a local cattle breed of the Catalonian Pyrenees (Spain and France. Ninety-two individuals were analyzed for five polymorphic genetic loci (Hb, Alb, Tf, Gc and Ptf2. The animals were grouped according to coat color: Fagina Alberes variety (N = 39 and Black Alberes variety (N = 53. The genetic structures and relationships between these subpopulations and one "outgroup" breed ("Bruna dels Pirineus" were analyzed and compared by using F-statistics. We determined that inbreeding in the Alberes breed is not significant, since negative and nonsignificant FIT and FIS values were obtained. The average genetic differentiation between subpopulations within the Alberes breed was 1.5% (FST = 0.015; P A estrutura génetica de uma população de Alberes, uma raça de gado dos Pirineus catalônicos (Espanha e França em risco de extinção, foi analisada e caracterizada bioquimicamente. Noventa e dois indivíduos foram analisados para 5 loci genéticos polimórficos (Hb, Alb, Tf, Gc e Ptf2. Os animais foram agrupados de acordo com a cor do pêlo: variedade Fagina Alberes (N = 39 e Black Alberes (N = 53. As estruturas genéticas e as relações entre estas subpopulações e uma raça extra ("Bruna dels Pirineus" foram analisadas e comparadas pela estatística F. A endogamia na raça Alberes não foi significante, pois foram obtidos valores FIT e FIS negativos e não significantes. A diferenciação genética média entre as subpopulações dentro da raça Alberes foi 1,5% (FST = 0,015; P < 0,05, com um número efetivo de 4,1 indivíduos trocados entre as subpopulações por geração (fluxo de gene. Os resultados obtidos neste estudo confirmaram o perigo potencial de extinção da raça. A variedade Black Alberes é sugerida como o principal núcleo de conservação genética para esta raça, pois parece mostrar maior grau de isolamento gen

  18. Genetic diversity and relationship of Yunnan native cattle breeds and introduced beef cattle breeds.

    Science.gov (United States)

    Yu, Ying; Lian, Lin-Sheng; Wen, Ji-Kun; Shi, Xian-Wei; Zhu, Fang-Xian; Nie, Long; Zhang, Ya-Ping

    2004-02-01

    In this study, random amplified polymorphic DNA (RAPD) analysis was used to estimate genetic diversity and relationship in 134 samples belonging to two native cattle breeds from the Yunnan province of China (DeHong cattle and DiQing cattle) and four introduced beef cattle breeds (Brahman, Simmental, MurryGrey, and ShortHorn). Ten primers were used, and a total of 84 bands were scored, of which 63 bands (75.0%) were polymorphic. The genetic distance matrix was obtained by proportions of shared fragment. The results indicate that the Yunnnan DeHong cattle breed is closely related to the Brahman (Bos indicus), and the Yunnan DiQing cattle breed is closely related to the Simmental, ShortHorn, and MurryGrey (Bos taurus) breeds. Our results imply that Bos indicus and Bos taurus were the two main origins of Yunnan native cattle. The results also provide the basic genetic materials for conservation of cattle resources and crossbreeding of beef cattle breeds in South China. PMID:15068334

  19. Investment, regulation, and uncertainty: managing new plant breeding techniques.

    Science.gov (United States)

    Smyth, Stuart J; McDonald, Jillian; Falck-Zepeda, Jose

    2014-01-01

    As with any technological innovation, time refines the technology, improving upon the original version of the innovative product. The initial GM crops had single traits for either herbicide tolerance or insect resistance. Current varieties have both of these traits stacked together and in many cases other abiotic and biotic traits have also been stacked. This innovation requires investment. While this is relatively straight forward, certain conditions need to exist such that investments can be facilitated. The principle requirement for investment is that regulatory frameworks render consistent and timely decisions. If the certainty of regulatory outcomes weakens, the potential for changes in investment patterns increases.   This article provides a summary background to the leading plant breeding technologies that are either currently being used to develop new crop varieties or are in the pipeline to be applied to plant breeding within the next few years. Challenges for existing regulatory systems are highlighted. Utilizing an option value approach from investment literature, an assessment of uncertainty regarding the regulatory approval for these varying techniques is undertaken. This research highlights which technology development options have the greatest degree of uncertainty and hence, which ones might be expected to see an investment decline.

  20. Molecular breeding for drought tolerance in plants: wheat perspective

    International Nuclear Information System (INIS)

    Wheat (Triticum aestivum L.em Thell.) is the first important and strategic cereal crop for the majority of world,s populations. It is the most important staple food of about two billion people (36% of the world population). Due to industrialization, erosion, urbanization, compaction, and the increase in acidity as a result of fertilization, there is a decrease in the available space for agriculture. Environmental conditions such as increased salinity, drought, and freezing cause adverse effects on the growth and productivity of cereal crops such as wheat (Triticum aestivum L.). Though grown under a wide range of climates and soils, wheat is best adapted to temperate regions. Whether the cropping occurs in the temperate areas or the tropics, both types of environments are affected by global warming and the destabilizing effects that it causes, none more serious than the attendant increased variability in rainfall and temperature. Due to the limited insight into the physiological basis of drought tolerance in wheat, a better understanding of some of the mechanisms that enable the plants to adapt to stress and maintain growth during stress periods would help in breeding for drought tolerance. On the other hand, understanding the genetic and genome organization using molecular markers is of great value for plant breeding purposes. (author)

  1. Molecular traceability of beef from synthetic Mexican bovine breeds.

    Science.gov (United States)

    Rodríguez-Ramírez, R; Arana, A; Alfonso, L; González-Córdova, A F; Torrescano, G; Guerrero Legarreta, I; Vallejo-Cordoba, B

    2011-01-01

    Traceability ensures a link between carcass, quarters or cuts of beef and the individual animal or the group of animals from which they are derived. Meat traceability is an essential tool for successful identification and recall of contaminated products from the market during a food crisis. Meat traceability is also extremely important for protection and value enhancement of good-quality brands. Molecular meat traceability would allow verification of conventional methods used for beef tracing in synthetic Mexican bovine breeds. We evaluated a set of 11 microsatellites for their ability to identify animals belonging to these synthetic breeds, Brangus and Charolais/Brahman (78 animals). Seven microsatellite markers allowed sample discrimination with a match probability, defined as the probability of finding two individuals sharing by chance the same genotypic profile, of 10(-8). The practical application of the marker set was evaluated by testing eight samples from carcasses and pieces of meat at the slaughterhouse and at the point of sale. The DNA profiles of the two samples obtained at these two different points in the production-commercialization chain always proved that they came from the same animal.

  2. Molecular traceability of beef from synthetic Mexican bovine breeds.

    Science.gov (United States)

    Rodríguez-Ramírez, R; Arana, A; Alfonso, L; González-Córdova, A F; Torrescano, G; Guerrero Legarreta, I; Vallejo-Cordoba, B

    2011-10-06

    Traceability ensures a link between carcass, quarters or cuts of beef and the individual animal or the group of animals from which they are derived. Meat traceability is an essential tool for successful identification and recall of contaminated products from the market during a food crisis. Meat traceability is also extremely important for protection and value enhancement of good-quality brands. Molecular meat traceability would allow verification of conventional methods used for beef tracing in synthetic Mexican bovine breeds. We evaluated a set of 11 microsatellites for their ability to identify animals belonging to these synthetic breeds, Brangus and Charolais/Brahman (78 animals). Seven microsatellite markers allowed sample discrimination with a match probability, defined as the probability of finding two individuals sharing by chance the same genotypic profile, of 10(-8). The practical application of the marker set was evaluated by testing eight samples from carcasses and pieces of meat at the slaughterhouse and at the point of sale. The DNA profiles of the two samples obtained at these two different points in the production-commercialization chain always proved that they came from the same animal.

  3. Population viability analysis on domestic horse breeds (Equus caballus)

    DEFF Research Database (Denmark)

    Thirstrup, Janne Pia; Bach, Lars; Loeschcke, Volker;

    2009-01-01

    In this study, we performed a population viability analysis on 3 domestic horse breeds (Equus caballus) of Danish origin, namely, the Frederiksborg, the Knabstrupper, and the Jutland breeds. Because of their small population sizes, these breeds are considered endangered. The Vortex software...... available. The results of this analysis accord with other studies on the Prezwalski horse, indicating robustness in the parameter sensitivity for horses....

  4. 50 CFR 15.26 - Approval of cooperative breeding programs.

    Science.gov (United States)

    2010-10-01

    ... 50 Wildlife and Fisheries 1 2010-10-01 2010-10-01 false Approval of cooperative breeding programs... WILDLIFE AND PLANTS WILD BIRD CONSERVATION ACT Permits and Approval of Cooperative Breeding Programs § 15.26 Approval of cooperative breeding programs. Upon receipt of a complete application, the...

  5. Studies on breeding schemes in a closed pig population.

    NARCIS (Netherlands)

    Roo, de G.

    1988-01-01

    Size of a population in genetic terms is a function of number of male and female individuals used for breeding over a generation. A breed can be small because of a small total number of individuals but also because of a small number of individuals of one sex. According to this definition, many breed

  6. The use of clones in dairy cattle breeding.

    NARCIS (Netherlands)

    Boer, de I.J.M.

    1994-01-01

    The aim of this thesis was to determine a breeding scheme that optimally uses large scale production of genetically identical individuals (clones) in dairy cattle. Such a breeding scheme should optimize the continuous genetic improvement of the breeding population (genetic response), and the selecti

  7. Maternal genealogical patterns of chicken breeds sampled in Europe.

    Science.gov (United States)

    Lyimo, C M; Weigend, A; Msoffe, P L; Hocking, P M; Simianer, H; Weigend, S

    2015-08-01

    The aim of this study was to investigate the maternal genealogical pattern of chicken breeds sampled in Europe. Sequence polymorphisms of 1256 chickens of the hypervariable region (D-loop) of mitochondrial DNA (mtDNA) were used. Median-joining networks were constructed to establish evolutionary relationships among mtDNA haplotypes of chickens, which included a wide range of breeds with different origin and history. Chicken breeds which have had their roots in Europe for more than 3000 years were categorized by their founding regions, encompassing Mediterranean type, East European type and Northwest European type. Breeds which were introduced to Europe from Asia since the mid-19th century were classified as Asian type, and breeds based on crossbreeding between Asian breeds and European breeds were classified as Intermediate type. The last group, Game birds, included fighting birds from Asia. The classification of mtDNA haplotypes was based on Liu et al.'s (2006) nomenclature. Haplogroup E was the predominant clade among the European chicken breeds. The results showed, on average, the highest number of haplotypes, highest haplotype diversity, and highest nucleotide diversity for Asian type breeds, followed by Intermediate type chickens. East European and Northwest European breeds had lower haplotype and nucleotide diversity compared to Mediterranean, Intermediate, Game and Asian type breeds. Results of our study support earlier findings that chicken breeds sampled in Europe have their roots in the Indian subcontinent and East Asia. This is consistent with historical and archaeological evidence of chicken migration routes to Europe.

  8. Genomic prediction across dairy cattle populations and breeds

    DEFF Research Database (Denmark)

    Zhou, Lei

    Genomic prediction is successful in single breed genetic evaluation. However, there is no achievement in acoress breed prediction until now. This thesis investigated genomic prediction across populations and breeds using Chinese Holsterin, Nordic Holstein, Norwgian Red, and Nordic Red. Nordic Red...

  9. Genetic diversity and relationships of Vietnamese and European pig breeds

    International Nuclear Information System (INIS)

    Full text: East Asia contains more than 50% of the world's pig population and Europe about 30% (according to FAO inventory. Both indigenous resources were domesticated from different sub-species and are assumed to be the basis of the world-wide genetic diversity in pig. Indigenous resources of Asia, however, are less defined and only rarely compared with European breeds. Taking advantage of DNA diagnostics, animals within as well as between breeds from Vietnam and Europe were analysed for numerous well defined markers in order to gain more knowledge about pig genetic biodiversity. The main objective was to investigate indigenous Vietnamese pig breeds from different local geographic regions. A set of pig breeds was chosen for this study of genetic diversity: five indigenous breeds from Vietnam (Mong Cai, Muong Khuong, Co, Meo, Tap Na), two exotic breeds kept in Vietnam (Large White, Landrace), three European commercial breeds (Pietrain, Landrace, Large White), and European Wild Boar. Samples and data from 317 animals (17 to 32 unrelated animals per breed) were collected. A panel of 27 polymorphic microsatellite loci was chosen according to FAO recommendations for diversity analyses and genetic distance studies. The loci were distributed evenly over the porcine genome with additional loci linked to immunological relevant genes (MHC, IFNG). Moreover, a few Type I loci (RYR1, FSH) were genotyped. DNA was isolated and PCR fragment lengths analysis were carried out on an ALF DNA sequencer (Pharmacia, Freiburg, Germany). Some of the RFLPs were analysed by agarose gel electrophoresis. Selected microsatellite alleles of equal lengths were sequenced for animals of different breeds. Within-breed diversity estimated heterozygosities and tests for Hardy-Weinberg equilibrium by taking into account sample sizes, tests per locus and breed as well as breed-locus combinations. Calculations were performed using the BIOSYS-1 software package. Breed differentiation was evaluated by the

  10. The effects of sex, age and breeding success on breeding dispersal of pied flycatchers along a pollution gradient.

    Science.gov (United States)

    Eeva, Tapio; Ahola, Markus; Laaksonen, Toni; Lehikoinen, Esa

    2008-08-01

    We modelled breeding dispersal of an insectivorous bird, the pied flycatcher (Ficedula hypoleuca) around a point source of heavy metals (a copper smelter). We tested for the effects of sex, age, breeding success and environmental pollution on breeding dispersal distances of F. hypoleuca females and males. Unlike many earlier studies on breeding dispersal, we took into account distance-dependent sampling bias by including in our model the recapture probabilities at different distances from the site of origin. Our results show that F. hypoleuca females disperse much farther (on average 7.9 km) from their breeding sites than what was previously thought. In contrast, males only disperse short distances (on average 190 m). Breeding success affected female breeding dispersal distances depending on female age: young females moved on average 8 km from their previous breeding place irrespective of their breeding success, while old females only seemed to move this far when their fledgling production was good. Females successful in their breeding dispersed as far as less successful females, or, among old birds, even farther. Females which dispersed long distances produced more fledglings after the movement than those staying near their previous breeding site. Degree of environmental pollution had no effect on female or male breeding dispersal distances. A polluted and unproductive environment does not seem to stimulate F. hypoleuca parents to move to more profitable territories. PMID:18543001

  11. Across-breed EPD tables for the year 2008 adjusted to breed differences for birth year of 2006

    Science.gov (United States)

    Records of F1 and 3-way cross progeny of 16 breeds of sire and maternal grandsire, respectively, were used to estimate differences among the breeds for birth, weaning, and yearling weight and for maternal effects of weaning weight and among 8 of the 16 breeds for carcass marbling, ribeye area, and f...

  12. Soybean mutation breeding programme in Malaysia

    International Nuclear Information System (INIS)

    The problem of breeding soybean in Malaysia is discussed with special reference to the use of induced mutation. Soybean is envisaged for planting as an intercrop in the rubber and oil palm plantations as well as a rotational crop with rice and/or other food annuals. An outline of the UKM breeding programme is described. EMS and gamma rays are used for induction of mutations. Three varieties, Acadian, Jupiter and Palmetto are selected for experimentation. Using two different dose levels 80,000 seeds per variety per season are treated with EMS and gamma rays respectively. Doses are chosen for obtaining 70% and 90% killing. The results of pilot experiments conducted in the greenhouse are presented. (author)

  13. Genetics and breeding of brewers yeast

    Energy Technology Data Exchange (ETDEWEB)

    Nilsson-Tillgren, T.; Gjermansen, C.; Petersen, J.G.L.; Holmberg, S.; Kielland-Brandt, M.C.

    1984-01-01

    Yeasts, used for beer production, can be divided into two groups, top fermenters and bottom fermenters and Saccharomyces carlsbergensis has been chosen as the name for the bottom fermenting yeasts which are used in lager beer production. The key for the analysis of the chromosomes of Saccharomyces carlsbergensis was provided by the discovery that single chromosomes of meiotic segregants of these strains can be transferred to genetically marked Saccharomyces cerevisiae strains and subsequently analyzed by tetrad analysis and molecular hybridization. It is proposed that Saccharomyces carlsbergensis is composed of two rather divergent genotypes. Breeding can be accomplished by cross breeding and mutagenesis and possibly by introducing in vitro modified cloned genes into meiotic segregants of Saccharomyces carlsbergensis.

  14. Progress of mutation breeding in Thailand

    International Nuclear Information System (INIS)

    The objectives in rice improvement in Thailand are to improve not only for high yielding and good grain quality but also for resistance to diseases and insects and tolerance to biotic stresses. Brief history of research and progress in rice mutation breeding in Thailand is presented. It includes the varieties of method such as using gamma rays, fast neutron and chemical mutagens, for example EMS (ethylmethane sulfonate) and EI (ethylene imine) for mutation works. Among all, improvements of Pathumthani 60 for short-statured plant type, RD23 for blast resistance, Basmati 370 for short-statured plant type, and Pra Doo Daeng for short-statured plant type and awnless grain are reported. To conclude, it is important to find the adequate doses of mutagen treatments that give maximum mutation frequencies, to know the optimal treatments or proper selection methods and to have well-defined objectives to create the success of mutation breeding. (S. Ohno)

  15. Breed differences in the frequency of bovine lymphocyte antigens.

    Science.gov (United States)

    Stear, M J; Brown, S C; Dimmock, C K; Dufty, J H; Hetzel, D J; Mackie, J T; Nicholas, F W; Tierney, T J; Wetherall, J D

    1987-01-01

    Lymphocytes from 1,564 cattle of 18 breeds and cross-bred groups in Australia were tested for major histocompatibility system class 1 antigens. Gene frequencies were calculated for the Angus, Belmont Red, Brahman, Hereford and Holstein-Friesian breeds. There were substantial differences among these breeds in antigen and gene frequency. There were striking differences among all 18 breeds in the presence or absence of certain antigens. Two antigens, CA13 and CA36, were strongly associated in Hereford cattle but occurred independently of each other in the other breeds. PMID:3273412

  16. Computerized management support for swine breeding farms.

    OpenAIRE

    Huirne, R.B.M.

    1990-01-01

    1. INTRODUCTIONThe investigations described in this thesis have been directed towards computerized management support for swine breeding farms, focused on sow productivity and profitability. The study is composed of three basic parts: (1) basic description and definition of farm management and management information systems (MIS), (2) individual farm analysis, and (3) sow replacement optimization. As part of the study, a MIS on the personal computer named CHESS ( C omputerized H erd E valuati...

  17. Mutation breeding of autotetraploid Achimenes cultivars

    International Nuclear Information System (INIS)

    Colchicine-induced autotetraploids of three Achimenes cultivars were irradiated with X-rays or fast neutrons. The results were compared, in one cultivar, with those of the irradiated diploid form. The mutation frequency after irradiation of the autotetraploid was a 20-40 fold higher as compared to the corresponding diploid. These results may open new possibilities for mutation breeding, though they are hard to explain. Several promising mutants were selected. (author)

  18. Lessons from the breeding program of rohu

    OpenAIRE

    Mahapatra, K.D.; Jana, R.K.; Saha, J.N.; Gjerde, G.; Sarangi, N.

    2006-01-01

    For the first time in India, selective breeding work has been initiated at the Central Institute of Freshwater Aquaculture, Bhubaneswar, India in collaboration with the Institute of Aquaculture Research (AKVAFORSK), Norway. Rohu has been chosen as the model species because it enjoys the highest consumer preference among Indian major carps (IMC) although its performance was observed to be slower than other IMC. As this was the first ever selection work on any Indian major carp, many procedures...

  19. Novel methods for improved tree breeding

    OpenAIRE

    Hallander, Jon

    2009-01-01

    The development and implementation of statistical tools to improve inference in sustainable forest tree breeding are presented here. By combining classical quantitative genetic theory and novel statistical methods, a number of parameters are optimized. The results obtained are compared to those achieved by traditional methods for visualizing improvements to genetic parameters. The methods are tested on both simulated data and on a real Scots pine pedigree. Modeling non-additive gene action us...

  20. Breeding soundness evaluation of young beef bulls

    OpenAIRE

    Persson, Ylva

    2007-01-01

    The overall aims were to learn more about factors affecting fertility in Swedish beef sires in general and in yearling beef bulls in particular, focusing mainly on sexual maturity and hind limb health finding useful tools in order to be able to routinely perform a complete bull breeding soundness evaluations in Swedish beef bulls. Semen was collected from yearling beef bulls, postmortem, and the sperm morphology was evaluated. Using a strict definition, based on sperm morphology, we could dem...

  1. Plant breeding and genetics newsletter. No. 3

    International Nuclear Information System (INIS)

    This third issue of the Plant Breeding and Genetics Newsletter highlights forthcoming events including regional (Afra) training course on 'molecular characterization of genetic biodiversity in traditional and neglected crops selected for improvement through mutation techniques' and seminar on 'mutation techniques and biotechnology for tropical and subtropical plant improvement in Asia and Pacific regions'. Status of existing co-ordinated and technical co-operation research projects is also summarized

  2. ITER breeding blanket module design and analysis

    International Nuclear Information System (INIS)

    The ITER breeding blanket employs a ceramic breeder and Be neutron multiplier both in small spherical pebble form. Radial-poloidal cooling panels are arranged in the blanket box to remove the nuclear heating in these materials and to reinforce the blanket structure. At the first wall, Be armor is bonded onto the stainless steel (SS) structure to provide a low Z plasma-compatible surface and to protect the first wall/blanket structure from the direct contact with the plasma during off-normal events. Thermo-mechanical analyses and investigation of fabrication procedure have been performed for this breeding blanket. To evaluate thermo-mechanical behavior of the pebble beds including the dependency of the effective thermal conductivity on stress, analysis methods have been preliminary established by the use of special calculation option of ABAQUS code, which are briefly summarized in this report. The structural response of the breeding blanket module under internal pressure of 4 MPa (in case of in-blanket LOCA) resulted in rather high stress in the blanket side (toroidal end) wall, thus addition of a stiffening rib or increase of the wall thickness will be needed. Two-dimensional elasto-plastic analyses have been performed for the Be/SS bonded interface at the first wall taking a fabrication process based on HIP bonding and thermal cycle due to pulsed plasma operation into account. The stress-strain hysteresis during these process and operation was clarified, and a procedure to assess and/or confirm the bonding integrity was also proposed. Fabrication sequence of the breeding blanket module was preliminarily developed based on the procedure to fabricate part by part and to assemble them one by one. (author)

  3. A Pebble-Bed Breed-and-Burn Reactor

    Energy Technology Data Exchange (ETDEWEB)

    Greenspan, Ehud [Univ. of California, Berkeley, CA (United States)

    2016-03-31

    The primary objective of this project is to use three-dimensional fuel shuffling in order to reduce the minimum peak radiation damage of ~550 dpa present Breed-and-Burn (B&B) fast nuclear reactor cores designs (they feature 2-D fuel shuffling) call for to as close as possible to the presently accepted value of 200 dpa thereby enabling earlier commercialization of B&B reactors which could make substantial contribution to energy sustainability and economic stability without need for fuel recycling. Another objective is increasing the average discharge burnup for the same peak discharge burnup thereby (1) increasing the fuel utilization of 2-D shuffled B&B reactors and (2) reducing the reprocessing capacity required to support a given capacity of FRs that are to recycle fuel.

  4. [Breeding of new Curcuma wenyujin variety "Wenyujin No. 1"].

    Science.gov (United States)

    Tao, Zheng-Ming; Jiang, Wu; Zheng, Fu-Bo; Wu, Zhi-Gang

    2014-10-01

    In order to breed and spread a new cultivar of Curcuma wenyujin, the C. wenyujin germplasm resources were investigated in authentic regions. Better varieties were chosen by comparing the yield, economic characters and quality differences between different cultivars. The results showed that the character of new selected cultivar was stable, the yield of zedoary, turmeric and curcuma was reached 313.7, 177.9, 91.2 kg per 667 m2, respectively, it increased 11.6%, 10.2%, 14.2% comparing with farmer varieties. The volatile oil contents in zedoary and turmeric was 4.0%, 3.0%, respectively. The target ingredients (germacrone) content was stable. It is demonstrated that the new cultivar "Wenyujin No. 1" has value for extension at authentic regions.

  5. A Pebble-Bed Breed-and-Burn Reactor

    International Nuclear Information System (INIS)

    The primary objective of this project is to use three-dimensional fuel shuffling in order to reduce the minimum peak radiation damage of ~550 dpa present Breed-and-Burn (B&B) fast nuclear reactor cores designs (they feature 2-D fuel shuffling) call for to as close as possible to the presently accepted value of 200 dpa thereby enabling earlier commercialization of B&B reactors which could make substantial contribution to energy sustainability and economic stability without need for fuel recycling. Another objective is increasing the average discharge burnup for the same peak discharge burnup thereby (1) increasing the fuel utilization of 2-D shuffled B&B reactors and (2) reducing the reprocessing capacity required to support a given capacity of FRs that are to recycle fuel.

  6. Detection of Breeding Blankets Using Antineutrinos

    Science.gov (United States)

    Cogswell, Bernadette; Huber, Patrick

    2016-03-01

    The Plutonium Management and Disposition Agreement between the United States and Russia makes arrangements for the disposal of 34 metric tons of excess weapon-grade plutonium. Under this agreement Russia plans to dispose of its excess stocks by processing the plutonium into fuel for fast breeder reactors. To meet the disposition requirements this fuel would be burned while the fast reactors are run as burners, i.e., without a natural uranium blanket that can be used to breed plutonium surrounding the core. This talk discusses the potential application of antineutrino monitoring to the verification of the presence or absence of a breeding blanket. It is found that a 36 kg antineutrino detector, exploiting coherent elastic neutrino-nucleus scattering and made of silicon, could determine the presence of a breeding blanket at a liquid sodium cooled fast reactor at the 95% confidence level within 90 days. Such a detector would be a novel non-intrusive verification tool and could present a first application of coherent elastic neutrino-nucleus scattering to a real-world challenge.

  7. Diet and breeding performance in cats.

    Science.gov (United States)

    Olovson, S G

    1986-07-01

    A conventional cat breeding colony with 70 queens (female cats) was studied during a 4 year period 1979-1982. During that time the fat content in the diet was increased from 15% to 27% of dry matter. An increase in the number of kittens per litter (from 4.5 to 5.5) and in the annual number of litters per queen (from 1.4 to 2.3) was found. In addition, the mortality decreased from over 20% to 9%. Bodyweight gain under the new diet was such that the males reached 2500 g in 4 months while the females showed this same weight at 5 months of age. Litter size and sex distribution as a function of queen age, litter interval and time of year are presented. It is concluded that husbandry and diet are factors which are of great importance in a cat breeding unit. It is shown that under our conditions it is possible to breed conventional cats with good results. PMID:3795859

  8. Beef cattle breeding à la Jefferson.

    Science.gov (United States)

    Hohenboken, W D

    1982-03-01

    ?Even more than most disciplines in the Animal Sciences, quantitative genetics is dependent upon models. Models, by definition, are abstractions of reality. Invariably they require simplifying assumptions, which should be but sometimes are not clearly specified. One thesis of this article, illustrated by examples, is that many of the assumptions upon which animal breeding theory and practice are based are not valid. Some proportion of research resources should be devoted to challenging or verifying those assumptions and following up those areas of enquiry suggested by the outcome of such research. A further thesis is that the selection of topics and priorities for animal breeding research should be a matter of choice by individual scientists and should not be determined by steering committees or directed by administrative fiat. Hopefully, the resultant mutation, cross-fertilization, assortment, recombination and selection of ideas that would result would bestow upon our discipline higher fitness from multiple-peak epistasis, and minimal danger of extinction (or petrification) from over-specialization. A final thesis is that true creativity by research scientists should be nurtured and rewarded and that work in traditional areas of breeding and quantitative genetics should be continued-but done better.

  9. The effects of dog breed development on genetic diversity and the relative influences of performance and conformation breeding.

    Science.gov (United States)

    Pedersen, N; Liu, H; Theilen, G; Sacks, B

    2013-06-01

    Genetic diversity was compared among eight dog breeds selected primarily for conformation (Standard Poodle, Italian Greyhound and show English Setter), conformation and performance (Brittany), predominantly performance (German Shorthaired and Wirehaired Pointers) or solely performance (field English Setter and Red Setter). Modern village dogs, which better reflect ancestral genetic diversity, were used as the standard. Four to seven maternal and one to two Y haplotypes were found per breed, with one usually dominant. Diversity of maternal haplotypes was greatest in village dogs, intermediate in performance breeds and lowest in conformation breeds. Maternal haplotype sharing occurred across all breeds, while Y haplotypes were more breed specific. Almost all paternal haplotypes were identified among village dogs, with the exception of the dominant Y haplotype in Brittanys, which has not been identified heretofore. The highest heterozygosity based on 24 autosomal microsatellites was found in village dogs and the lowest in conformation (show) breeds. Principal coordinate analysis indicated that conformation-type breeds were distinct from breeds heavily used for performance, the latter clustering more closely with village dogs. The Brittany, a well-established dual show and field breed, was also genetically intermediate between the conformation and performance breeds. The number of DLA-DRB1 alleles varied from 3 to 10 per breed with extensive sharing. SNPs across the wider DLA region were more frequently homozygous in all pure breeds than in village dogs. Compared with their village dog relatives, all modern breed dogs exhibit reduced genetic diversity. Genetic diversity was even more reduced among breeds under selection for show/conformation. PMID:23679949

  10. Status and Prospects of Hybrid Rice Breeding in Jiangsu, China

    Institute of Scientific and Technical Information of China (English)

    WANG Cai-lin

    2005-01-01

    Research on hybrid rice in Jiangsu Province, China began in 1970. Great progress has been made since then, which can be divided into three stages according to the development of hybrid rice breeding and production in Jiangsu Province. The first stage was beginning stage from 1970 to 1980, when progress was mainly made in cytoplasmic male sterile line breeding. The second stage could be described as developing stage, from 1980 to 1995, when indica hybrid rice was rapidly popularized, and japonica hybrid rice became popular later. From 1996, hybrid rice breeding in Jiangsu Province entered the third stage, when both indica and japonica hybrid rice breeding in the three-line system or intersubspecific hybrid rice breeding in the two-line system made a great breakthrough with the successful breeding of the hybrids Teyou 559, 9 You 138 and Liangyoupeijiu. The developing trend of hybrid rice breeding in Jiangsu Province is also discussed.

  11. The different breeding strategies of penguins: a review.

    Science.gov (United States)

    Ancel, André; Beaulieu, Michaël; Gilbert, Caroline

    2013-01-01

    The 18 penguin species are exclusively and widely distributed in the Southern hemisphere, from the Equator to the Antarctic continent, and are thus submitted to various ecological constraints in their reproductive strategy. This results in a high variability in all aspects of the breeding biology of the different species. Although penguins appear primarily adapted for a marine existence, they remain dependent on land for breeding, rearing young, and moulting. Here we describe and compare the breeding cycle of all the penguin species, highlighting the characteristics of each species in terms of breeding range, population status, threats induced by environmental changes, duration of the different phases of the breeding cycle, mate fidelity, body mass, body height, egg mass and duration of egg formation. We also focus on the breeding cycle of the genus Aptenodytes, since it largely differs from the breeding cycle of most of the other penguin species.

  12. Effect of goat breed on the meat quality

    Directory of Open Access Journals (Sweden)

    Ivanović Snežana D.

    2014-01-01

    Full Text Available The quality of goat meat has recently become an important aspect in the marketing of goats in Serbia. The aim of this study was to compare some goat meat quality parameters of various races and to determine the differences between them. Goat breeds were Balkan goat and Serbian White goat, both female in the age of four years. Analysis of quality parameters: chemical composition (moisture, protein, total fat, ash,, pH value, fatty acids, amino acids, microelements content, tenderness, cooking loss and colour measurements were done. Statistically significant difference was found between the samples of two groups of goat meat (P <0.05 in relation to: live weight (kg, water (%, fat (%, protein (%, ash (%, among 11 of 15 tested fatty acids, amino acid leucin, sensory examination of fresh meat for the palpatory evaluated firmness and in the content of copper and zinc. Statistically significant differences between the groups did not existed regarding the pH value, fatty acids eicosenoic, cis-heptadecenoic, t-elaidic, t-linolelaidic and amino acids alanine, arginine, aspartic acid, cysteine, glutamic acid, glycine, histidine, isoleucine, lysine, methionine, phenylalanine, proline, serine, threonine, tryptophan, tyrosine, valine. Also there was no statistically significant difference in instrumental testing of the meat color, sensory evaluation of surface color, visual evaluated structure, olfactory evaluated odor and iron and manganese. These results suggest that the race of animal has an impact on meat quality. [Projekat Ministarstva nauke Republike Srbije, br. TR 31053: Implementation of new biotechnological solutions in breeding of cattle, sheep and goats for the purpose of obtaining biologically valuable and safe food

  13. Spatial scale of local breeding habitat quality and adjustment of breeding decisions.

    Science.gov (United States)

    Doligez, Blandine; Berthouly, Anne; Doligez, Damien; Tanner, Marion; Saladin, Verena; Bonfils, Danielle; Richner, Heinz

    2008-05-01

    Experimental studies provide evidence that, in spatially and temporally heterogeneous environments, individuals track variation in breeding habitat quality to adjust breeding decisions to local conditions. However, most experiments consider environmental variation at one spatial scale only, while the ability to detect the influence of a factor depends on the scale of analysis. We show that different breeding decisions by adults are based on information about habitat quality at different spatial scales. We manipulated (increased or decreased) local breeding habitat quality through food availability and parasite prevalence at a small (territory) and a large (patch) scale simultaneously in a wild population of Great Tits (Parus major). Females laid earlier in high-quality large-scale patches, but laying date did not depend on small-scale territory quality. Conversely, offspring sex ratio was higher (i.e., biased toward males) in high-quality, small-scale territories but did not depend on large-scale patch quality. Clutch size and territory occupancy probability did not depend on our experimental manipulation of habitat quality, but territories located at the edge of patches were more likely to be occupied than central territories. These results suggest that integrating different decisions taken by breeders according to environmental variation at different spatial scales is required to understand patterns of breeding strategy adjustment.

  14. Large forest patches promote breeding success of a terrestrial mammal in urban landscapes.

    Directory of Open Access Journals (Sweden)

    Masashi Soga

    Full Text Available Despite a marked increase in the focus toward biodiversity conservation in fragmented landscapes, studies that confirm species breeding success are scarce and limited. In this paper, we asked whether local (area of forest patches and landscape (amount of suitable habitat surrounding of focal patches factors affect the breeding success of raccoon dogs (Nyctereutes procyonoides in Tokyo, Central Japan. The breeding success of raccoon dogs is easy to judge as adults travel with pups during the breeding season. We selected 21 forest patches (3.3-797.8 ha as study sites. In each forest patch, we used infra-red-triggered cameras for a total of 60 camera days per site. We inspected each photo to determine whether it was of an adult or a pup. Although we found adult raccoon dogs in all 21 forest patches, pups were found only in 13 patches. To estimate probability of occurrence and detection for raccoon in 21 forest fragments, we used single season site occupancy models in PRESENCE program. Model selection based on AIC and model averaging showed that the occupancy probability of pups was positively affected by patch area. This result suggests that large forests improve breeding success of raccoon dogs. A major reason for the low habitat value of small, isolated patches may be the low availability of food sources and the high risk of being killed on the roads in such areas. Understanding the effects of local and landscape parameters on species breeding success may help us to devise and implement effective long-term conservation and management plans.

  15. Kappa-casein gene study in Iranian Sistani cattle breed (Bos indicus) using PCR-RFLP.

    Science.gov (United States)

    Rohallah, Alinaghizadeh; Mohammadreza, Mohammad Abadi; Shahin, Moradnasab Badrabadi

    2007-12-01

    In cattle, caseins are subdivided into four main groups: alphaS1-, alphaaS2-, beta- and kappa-caseins. kappa-caseins (CSN2) considerably differ from other caseins in structure and other properties. Testing the A and B alleles is of practical importance, because the milk of cows that carry the B allele of CSN3 has a better thermal resistance and shorter coagulation time, better curdles and contains micelles of different sizes. Iranian Sistani cattle (Bos indicus) are a heavy built breed and used as dual-purpose cattle breed in Eastern Iran. This breed is a genetic resource that shows special features of adaptation to rustic environments. One of the most distinctive features of Sistani cattle is its great capability to resist diseases which makes it a potential reservoir of germplasm useful for future crosses. Our main goal was to study DNA-polymorphism of the CSN3 gene in the Iranian Sistani native cattle (Bos indicus) and analyze the information value of CSN3 gene polymorphism as a genetic marker. We genotyped and analyzed 65 animals of this breed using PCR-RFLP. The frequencies of A and B alleles were 0.6385 and 0.3615 and those of AA, AB and BB genotypes were 0.4000, 0.4769 and 0.1231, respectively. In the Sistani Zebu breed, frequency of B allele is higher than other Zebu breeds, indicating that intensive selection for dairy production have been done and indirectly influenced CSN3 allele frequencies.

  16. Differential Gene Expression across Breed and Sex in Commercial Pigs Administered Fenbendazole and Flunixin Meglumine.

    Science.gov (United States)

    Howard, Jeremy T; O'Nan, Audrey T; Maltecca, Christian; Baynes, Ronald E; Ashwell, Melissa S

    2015-01-01

    Characterizing the variability in transcript levels across breeds and sex in swine for genes that play a role in drug metabolism may shed light on breed and sex differences in drug metabolism. The objective of the study is to determine if there is heterogeneity between swine breeds and sex in transcript levels for genes previously shown to play a role in drug metabolism for animals administered flunixin meglumine or fenbendazole. Crossbred nursery female and castrated male pigs (n = 169) spread across 5 groups were utilized. Sires (n = 15) of the pigs were purebred Duroc, Landrace, Yorkshire or Hampshire boars mated to a common sow population. Animals were randomly placed into the following treatments: no drug (control), flunixin meglumine, or fenbendazole. One hour after the second dosing, animals were sacrificed and liver samples collected. Quantitative Real-Time PCR was used to measure liver gene expression of the following genes: SULT1A1, ABCB1, CYP1A2, CYP2E1, CYP3A22 and CYP3A29. The control animals were used to investigate baseline transcript level differences across breed and sex. Post drug administration transcript differences across breed and sex were investigated by comparing animals administered the drug to the controls. Contrasts to determine fold change were constructed from a model that included fixed and random effects within each drug. Significant (P-value fenbendazole, respectively. The current analysis found transcript level differences across swine breeds and sex for multiple genes, which provides greater insight into the relationship between flunixin meglumine and fenbendazole and known drug metabolizing genes.

  17. Long-term climate impacts on breeding bird phenology in Pennsylvania, USA.

    Science.gov (United States)

    McDermott, Molly E; DeGroote, Lucas W

    2016-10-01

    Climate change is influencing bird phenology worldwide, but we still lack information on how many species are responding over long temporal periods. We assessed how climate affected passerine reproductive timing and productivity at a constant effort mist-netting station in western Pennsylvania using a model comparison approach. Several lines of evidence point to the sensitivity of 21 breeding passerines to climate change over five decades. The trends for temperature and precipitation over 53 years were slightly positive due to intraseasonal variation, with the greatest temperature increases and precipitation declines in early spring. Regardless of broodedness, migration distance, or breeding season, 13 species hatched young earlier over time with most advancing >3 days per decade. Warm springs were associated with earlier captures of juveniles for 14 species, ranging from 1- to 3-day advancement for every 1 °C increase. This timing was less likely to be influenced by spring precipitation; nevertheless, higher rainfall was usually associated with later appearance of juveniles and breeding condition in females. Temperature and precipitation were positively related to productivity for seven and eleven species, respectively, with negative relations evident for six and eight species. We found that birds fledged young earlier with increasing spring temperatures, potentially benefiting some multibrooded species. Indeed, some extended the duration of breeding in these warm years. Yet, a few species fledged fewer juveniles in warmer and wetter seasons, indicating that expected future increases could be detrimental to locally breeding populations. Although there were no clear relationships between life history traits and breeding phenology, species-specific responses to climate found in our study provide novel insights into phenological flexibility in songbirds. Our research underscores the value of long-term monitoring studies and the importance of continuing constant

  18. Overview of mutation breeding in Sudan

    International Nuclear Information System (INIS)

    Mutation breeding has effectively started about twenty years ago with the implementation of the first technical cooperation (TC) project of the IAEA in Sudan. This presentation highlights achievements and prospect of this collaboration. The first TC project (SUD 5/023) was confined to cotton and sugarcane while in the following projects (SUD 5/028 and SUD 5/030) other crops such as sesame, banana, tomato, groundnuts and cereals were included. The mutation program also benefited from the regional projects (RAF5/50 and RAF5/56). Plant breeders involved in mutation breeding increased from less than five in the first project to over 15 in the current one. A banana mutant cultivar (ALBEELY) was released in the year 2003. Albeely excelled the yield of the existing cultivars by 40% and has better crop stand and fruit quality. Albeely is becoming popular and widely preferred by farmers. A drought tolerant ground nut mutant (Barberton-B-30-3) and a number of promising mutants resistant for tomato yellow leaf curl virus (TYLCV) are being evaluated in multi-location trails in preparation for their commercial release. Cotton germplasm has been enrich with a number of useful mutants carrying resistance for bacterial blight and fusarium wilt disease in addition to mutants for weak fiber attachments and high ginning out turn and lint percentage. These mutants are being used in the breeding program and promising lines are under field evaluation for release. The mutation breeding program is strengthened by installing irradiator and establishing tissue culture and molecular laboratories. It is evident that the TC program of the IAEA has contributed significantly to the establishment and sustainability of mutation breeding and related biotechnologies in Sudan. The program is progressively expanding and a number of outstanding cultivars were released or in the pipeline. Intensive work is under way to generated production package for these mutants and set a demonstration plot program

  19. Roselle improvement through conventional and mutation breeding

    International Nuclear Information System (INIS)

    Roselle (Hibiscus sabdariffa L.) from Malvaceae family is relatively a new crop in Malaysia. The origin is not fully known but believed to be from West Africa, although the plant is found native from India to Malaysia. The calyxes, stems and leaves are acid and closely resemble the cranberry (Vaccinium spp.) in flavour. Anthocyanins, which are now receiving a growing importance as natural food colorant, are responsible for the red to purple color of the calyx and other parts of the plant. The calyxes from the flowers are processed to produce juice for drink containing very high vitamin C (ascorbic acid), and also into jam, jelly and dried products. Interestingly, many other parts of the plant are also claimed to have various medicinal values. Presently, roselle is planted in Terengganu (175 ha in 2002) on bris soils, but its planting has spread to some parts of Kelantan, Pahang, Johor and also Sarawak. The number of roselle varieties available for planting is very limited; however, the effort carried out for roselle improvement thus far is equally very limited. There has been very little serious conventional breeding attempted, although varietal evaluation has had been carried out, particularly in form of agronomic trials. Since 1999, several studies on induced mutations have been attempted at UKM. A preliminary polyploidization study was conducted to determine the effects of colchicine concentrations of 0%, 0.04%, 0.08%, 0.12% and 0.16% and soaking times of 2 and 4 hours at room temperature (30 degree C) on 2-day old germinated seeds on morpho-agronomic traits (e.g. number of branches, internode length, leaf length, leaf width, number of flowers and days to flowering), ploidy level and pollen grain size in treated and also derived generations. Flow cytometric analyses of nuclear DNAAT content of leaf samples using LB01 lysis buffer and DNA specific fluorochrome DAPI (4',6-diamidino-2-phenylindole) staining were carried out using a flow cytometer at MINT, Bangi for

  20. Study of Meat Physical-Chemical Composition of Three Trout Breeds Farmed in Salmonid Exploitations from Moldova

    Directory of Open Access Journals (Sweden)

    Cătălin Emilian NISTOR

    2014-11-01

    Full Text Available For all trout breeds, especially regarding brown trout, data from local and foreign literature consulted are less conclusive and sometimes controversial in terms of physical-chemical composition of trout meat, so our research represents a first for Romanian literature and aims to bring new information to enrich it.Our research aimed to evaluate the physical-chemical composition of the meat gathered from brook, rainbow and brown trout breed, by analyzing 50 individuals, 10 individuals in each batch (F1, F2, C1 C2 and I1, from two trout farms from Moldova, being determine the pH of meat, dry matter, content in proteins, lipids, ash and water/protein ratio for all three trout breeds. The obtained values for pH at warm ranged between 6.91 at batch F1, and 7.09 for batch I1. As regarding the pH at cold, this one had and descendant evolution ranging between: 6.78 for trout from batch F1 respectively a value of 6.88 for individuals from batch I1. The obtained values were between 23.95 and 27.12 for dry matter. Content in proteins recorded the best values (19.21% at individuals from batch F2, and content in lipids oscillated between 4.14% and 5.62%. The obtained values regarding physical-chemical composition highlighted that all trout breeds have a good nutritional value.

  1. Pelvic limb alignment in small breed dogs: a comparison between affected and free subjects from medial patellar luxation.

    Science.gov (United States)

    Olimpo, Matteo; Piras, Lisa Adele; Peirone, Bruno

    2016-03-31

    Small breed dogs are 12 times more likely to develop medial patellar luxation (MPL) than large breed dogs and breed predisposition has been reported. Many surgical techniques are available for correction of patellar luxation in dogs. However, recent studies reported an 8% incidence of reluxation when traditional techniques are used. The relatively high frequency of major complications and patellar reluxation may be partially caused by inadequate appreciation of the underlying skeletal deformity and subsequent incorrect selection and application of traditional techniques. The aims of this study were to report the normal values of the anatomic and mechanical joint angles of the femur and tibia in small breed dogs and to compare these data to a population of small breed dogs a ected by di erent degrees of MPL. Normal values of the anatomic and mechanical angles of the femur are similar to the ones reported in literature in Pomeranian dogs. Normal values of the anatomic and mechanical angles of the tibia have been described for the rst time. Signi cant di erences were found between normal population and dogs a ected by grade 4 MPL in relation to anatomical Lateral Distal Femoral Angle (aLDFA), mechanical Medial Proximal Tibial Angle (mMPTA), and mechanical Caudal Proximal Tibial Angle (mCaPTA). PMID:26681507

  2. Blood haematological and biochemical parameters in normal cycling, pregnant and repeat breeding buffaloes (Bubalus bubalis) maintained in isothermic and isonutritional conditions

    Institute of Scientific and Technical Information of China (English)

    Anthony Sabasthin; Venkataswamy Girish Kumar; Sumanta Nandi

    2012-01-01

    Objective:The present study was envisaged to examine the hematological and biochemical, parameters in three different groups of buffaloes (regularly cycling, pregnant and repeat breeding) maintained in isothermic and isonutritional conditions to establish the variations in blood and/or serum components in these groups.Methods:Blood samples were analyzed for hemoglobin, PCV, TLC, neutophil, lymphocyte, eosinophil, and monocyte count, glucose, total protein, albumin, globulin, urea and cholesterol.Results:The results revealed significantly lower haemoglobin and packed cell volume value in repeat breeding when compared to pregnant and regularly cycling animals. The WBC value significantly higher in repeat breeding when compared to regularly cycling animals. The average mean values of neutrophils, lymphocyte and eosinophils revealed a no significant difference in the neutrophils, lymphocyte and eosinophils in between the group. The mean values of monocytes revealed a significantly higher value in repeat breeding animals when compared to pregnant animals. The serum glucose, total protein, cholesterol and urea levels were significantly lower in repeat breeding compared to pregnant and regularly cycling animals. The levels of albumin and globulin revealed non-significant difference among the groups.Conclusions: A significant decrease in the hemoglobin, PCV, glucose, total protein, cholesterol and urea was observed in the repeat breeding animals when compared to pregnant and regularly cycling animals.

  3. Effects on milk production in F1 crossbred of Alpine goat breed (♂ and Albanian goat breed (♀

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    Luan Hajno

    2012-07-01

    Full Text Available About 950,000 goats, farmed mostly in hilly and mountainous areas of Albania, contribute about 8% of the country’s total milk production. In order to increase milk production, farmers are currently using crosses of the local goat breed with exotic breeds, mainly the Alpine breed from France. This study examines milk production data of first lactation from 45 goats of the local breed, 82 goats of the Alpine breed and 58 F1 crosses (♂Alpine breed x ♀local breed. The goats were kept on small-scale farms according to the traditional Albanian system. Milking was carried out in the morning and evening. Kids were weaned at 65 days of age after which milking started. Milk yield was recorded twice with a 15-day interval between the two readings. Total milk yield was calculated using the Fleischmann method. The F1 goats produced 37.8 kg more milk than local breed goats although the lactation length (P<0.05 of F1 goats was six days shorter compared to that of local breed goats (P<0.05. Analysis of variance showed a highly significant effect (P<0.01 of the genotype factor on milk production. The average Cappio-Borlino curves of three genotypes indicated that the lactation curves of local breed and F1 crosses were similar. Although the F1 cross goats had 50% of their genomes from a genetically improved breed they were still able to deal with the difficult conditions that characterize the traditional extensive farming systems in Albania. Breeding pure Alpine breed or its crosses with the local goat breed improved milk production in an extensive traditional system.

  4. Influence of age, sex and breeding status on mercury accumulation patterns in the wandering albatross Diomedea exulans

    International Nuclear Information System (INIS)

    Although mercury bio-amplifies through the food chain and accumulates in top predators, mercury concentrations in tissues of the wandering albatross are greater than in any other vertebrate, including closely related species. In order to explore the alternative explanations for this pattern, we measured total mercury concentrations in feathers, plasma and blood cells of wandering albatrosses of known age, sex and breeding status sampled at South Georgia. Mercury concentrations were low in feathers and blood components of chicks, and higher in the feathers of young pre-breeders than in feathers or blood of older pre-breeders and breeding adults. There was no effect of sex on mercury concentrations in the feathers of pre-breeders or breeding adults, whereas levels were significantly higher in blood cells of breeding females than males. The high feather mercury concentrations of young pre-breeders compared with older birds suggest an increase in moult frequency as birds approach maturity. -- Highlights: •An integrated approach on mercury accumulation in wandering albatrosses is made. •The factors contributing to the high mercury values reported for this species are discussed. •Mercury concentration in young pre-breeders feathers is higher than in older birds. •Mercury levels were significantly higher in blood cells of breeding females than males. •Possible adverse effects of mercury in wandering albatrosses make its monitoring advisable. -- We address the influence of age, sex and breeding status on the accumulation of very high mercury levels in the wandering albatross

  5. Cost-benefit Analysis of Scale Pig Breeding in Shandong Province Based on Modified Entropy Weight-TOPSIS Model

    Institute of Scientific and Technical Information of China (English)

    Yuanyuan; ZHANG; Shimin; SUN

    2014-01-01

    According to the relevant statistical data in National Agricultural cost-benefit Data Compilation(2001- 2013),we use the modified entropy weight- TOPSIS model to research the cost-benefit status of scale pig breeding in Shandong Province from the perspective of comparing it with that of the entire country and 9 other main pig producing areas. The results show that compared with the national average,the cost-benefit ratio of small scale pig breeding in Shandong Province is lower,while the cost-benefit ratio of medium scale and large scale pig breeding is significantly improved; the cost-benefit ratio of small scale pig breeding in Shandong Province is basically the same as that in 9 other main pig producing areas,while the cost-benefit ratio of medium scale and large scale pig breeding is higher; the output value of main products and the purchase price of piglet are two major bottlenecks restricting the cost-benefit improvement of scale pig breeding in Shandong Province.

  6. Breeding blanket design for ITER and prototype (DEMO) fusion reactors and breeding materials issues

    Energy Technology Data Exchange (ETDEWEB)

    Takatsu, H.; Enoeda, M. [Japan Atomic Energy Research Inst., Naka, Ibaraki (Japan). Naka Fusion Research Establishment

    1998-03-01

    Current status of the designs of the ITER breeding blanket and DEMO blankets is introduced placing emphasis on the breeding materials selection and related issues. The former design is based on the up-to-date design activities, as of October 1997, being performed jointly by Joint Central Team (JCT) and Home Teams (HT`s), while the latter is based on the DEMO blanket test module designs being proposed by each Party at the TBWG (Test Blanket Working Group) meetings. (J.P.N.)

  7. Developing Value

    OpenAIRE

    Cowe, Roger

    2002-01-01

    Based on more than 240 real-life examples in over 60 countries, Developing Value is the first large-scale study analyzing the business case for sustainability in emerging markets, the opportunity for businesses to achieve benefits such as higher sales, reduced costs and lower risks from better corporate governance, improved environmental practices, and investments in social and economic de...

  8. Value Added

    Science.gov (United States)

    Wilson, M. Roy

    2015-01-01

    With more than a thousand honors programs or colleges in the United States and that number growing every year, defining the value of honors is a significant undertaking. Honors seems to have become an obligatory upgrade that no college or university president can afford to be without, but there is more than institutional trending to be considered,…

  9. Simulation Modeling in Plant Breeding: Principles and Applications

    Institute of Scientific and Technical Information of China (English)

    WANG Jian-kang; Wolfgang H Pfeiffer

    2007-01-01

    Conventional plant breeding largely depends on phenotypic selection and breeder's experience, therefore the breeding efficiency is low and the predictions are inaccurate. Along with the fast development in molecular biology and biotechnology, a large amount of biological data is available for genetic studies of important breeding traits in plants,which in turn allows the conduction of genotypic selection in the breeding process. However, gene information has not been effectively used in crop improvement because of the lack of appropriate tools. The simulation approach can utilize the vast and diverse genetic information, predict the cross performance, and compare different selection methods. Thus,the best performing crosses and effective breeding strategies can be identified. QuLine is a computer tool capable of defining a range, from simple to complex genetic models, and simulating breeding processes for developing final advanced lines. On the basis of the results from simulation experiments, breeders can optimize their breeding methodology and greatly improve the breeding efficiency. In this article, the underlying principles of simulation modeling in crop enhancement is initially introduced, following which several applications of QuLine are summarized, by comparing the different selection strategies, the precision parental selection, using known gene information, and the design approach in breeding. Breeding simulation allows the definition of complicated genetic models consisting of multiple alleles, pleiotropy, epistasis, and genes, by environment interaction, and provides a useful tool for breeders, to efficiently use the wide spectrum of genetic data and information available.

  10. Fitness consequences of timing of migration and breeding in cormorants.

    Directory of Open Access Journals (Sweden)

    Phillip Gienapp

    Full Text Available In most bird species timing of breeding affects reproductive success whereby early breeding is favoured. In migratory species migration time, especially arrival at the breeding grounds, and breeding time are expected to be correlated. Consequently, migration time should also have fitness consequences. However, in contrast to breeding time, evidence for fitness consequences of migration time is much more limited. Climate change has been shown to negatively affect the synchrony between trophic levels thereby leading to directional selection on timing but again direct evidence in avian migration time is scarce. We here analysed fitness consequences of migration and breeding time in great cormorants and tested whether climate change has led to increased selection on timing using a long-term data set from a breeding colony on the island of Vorsø (Denmark. Reproductive success, measured as number of fledglings, correlated with breeding time and arrival time at the colony and declined during the season. This seasonal decline became steeper during the study period for both migration and breeding time and was positively correlated to winter/spring climate, i.e. selection was stronger after warmer winters/springs. However, the increasing selection pressure on timing seems to be unrelated to climate change as the climatic variables that were related to selection strength did not increase during the study period. There is indirect evidence that phenology or abundances of preferred prey species have changed which could have altered selection on timing of migration and breeding.

  11. Efeito da inclusão da covariância genética aditiva direta-materna no modelo de análise sobre a magnitude das estimativas de parâmetros e valores genéticos preditos para ganho de peso na raça Brangus Effect of genetic direct-maternal covariance inclusion in the model of analizys on the estimate of parameters and predicted genetic values for weight gain in Brangus breed

    Directory of Open Access Journals (Sweden)

    Luiz Felipe Waihrich Guterres

    2007-06-01

    this research was to study the effect of accouting for the covariance between the additive genetic direct and the maternal effects (covd-m on the estimates of genetic parameters and on predictions of genetic values (VG, for average daily gain from birth to weaning (GMDND and from weaning to 550 days of age (GMDDS. They were analyzed 28,949 records for GMDND and 11,884 for GMDDS of a Brangus breed population (58 Angus x 3/8 Nellore, collected from 1986 to 2002. The (covariance components were obtained by REML. In the animal model for GMDND, the additive genetic direct and maternal and residual effects were considered as random, and the effects of contemporaneous group at weaning (Gc²05, the interaction of the Nellore-Angus breed genetic percentage of the bull and cow (FGNA and the covariables, age of the cow at birth (IV and age at weaning (ID as fixed effects. For GMDDS, the model was the same, except that Gc²05 was substituted by contemporaneous group at 550 days of age (CG550 and ID by age at 550 days. In both models, permanent environmental effect of the cow was considered as a random effect. The heritabilities estimated for direct genetic effects ranged from 0.14 ± 0.03 to 0.21 ± 0.03 and for maternal effects from 0.00 ± 0.01 to 0.15 ± 0.02, the estimates had smaller values when covd-m was included in the model for GMDND. The correlations between genetic direct and maternal effects were negative -0.25 ± 0.12 (GMDND and -0.77 ± 0.19 (GMDDS. The likelihood ratio test showed that there is no significant diference, at 5% significance level, between the adopted models for boths characteristics. The rank correlation between the VG predicted by the two models, were 0.89 for GMDND and 0.98 for GMDND, suggesting that a slight change in the rank of the animals can happen, for GMDND.

  12. Genetic Diversity Analysis of the Gohilwari Breed of Indian Goat (Capra hircus Using Microsatellite Markers

    Directory of Open Access Journals (Sweden)

    S. Kumar

    2009-01-01

    Full Text Available Problem statement: Gohilwari breed of goat is a multipurpose goat mainly for milk and meat purposes and best suited in its harsh climatic condition. This breed is inadequately characterized till now at DNA level. So the present study was undertaken for population genetic analysis at molecular level to exploit the breed for planning sustainable improvement, conservation and utilization, which subsequently can improve the livelihood of its stake holders. Approach: The experiment was conducted on 50 genomic DNA samples of unrelated goat using 25 microsatellite markers selected from the list suggested by International Society for Animal Genetics (ISAG and FAO’s (DAD-IS. Results: All of the 25 microsatellites were well amplified. The observed number of alleles detected per locus ranged from 4-24 with an overall mean of 10.12±5.46. Overall mean observed heterozygosity of 0.505 was lower than the overall mean expected heterozygosity of 0.684. Most of the loci showed the heterozygote deficit as also depicted by Fis value. There was substantial genetic variation and polymorphism across studied loci in the Gohilwari breed of goat. And this population was not in Hardy-Weinberg equilibrium at most of the studied loci. This population was also receiving new genetic materials throuFgh introduction of immigrants. Conclusion: The strong inference that the Gohilwari breed of goat has not undergone bottleneck is also important for goat breeders and conservationists, as it suggests that any unique alleles present in this breed may not have been lost. Therefore, it can be recommended that within-breed diversity is actively maintained to enable these extensively unmanaged stocks to adapt to future demands and conditions and there is ample scope for further improvement in its productivity through appropriate breeding strategies. Though, microsatellites are neutral to selection with Ewens-Watterson test for neutrality some microsatellites were found not neutral or

  13. Genetic and environmental variation in a commercial breeding program of perennial ryegrass

    DEFF Research Database (Denmark)

    Fé, Dario; Pedersen, Morten Greve; Jensen, Christian S;

    2015-01-01

    Implementation of genomic selection (GS) for the genetic improvement of forage crops, such as perennial ryegrass, requires the establishment of sufficiently large training populations ith high-quality phenotype and genotype data. This paper presents estimates of genetic and environmental variance...... and location), and random effects (breeding values, pedigree or parents, repeated effects of family or parents within location, and within trial environmental effects, to recover interblock information). Results showed very significant genetic variances for all traits, which provide good opportunities...... for future GSbased breeding programs. Forage yield showed family heritabilities of up to 0.30 across locations and up to 0.60 within a location. Similar or moderately lower values were found for the other traits. In particular, the heritabilities of rust resistance and aftermath heading were very...

  14. SLAUGHTERING QUALITY OF CROSSBRED PIGS WITH GERMAN LANDRACE AND PIETRAIN AS TERMINAL BREEDS

    Directory of Open Access Journals (Sweden)

    Đuro Senčić

    2000-06-01

    Full Text Available In the aim of slaugtering quality improvement of pigs, crossbred sows of Large White and Swedish Landrace (F1 are crossed with German Landrace, Pietrain or some other boars from exemptionaly lean breeds. Triple crosses between Large White, Swedish Landrace and Pietrain are different from triple crosses with German Landrace as terminal breed regarding the conformation and leaness of carcasses and meat quality. Triple crosses with Pietrain have bigger ham diameter (72.40 cm: 70.30 cm, bigger share of ham (29.24% : 28.54%, necks (8.05% : 7.64% and belly-rib parts (19.15% : 17.33%, better leaness (55.64% : 53.40%, lower pH2 values in muscle tissue (5,50 : 5,86, lower water holding capacity (9.70 cm2: 8.50 cm2 and paler color (58.00 : 65.50 Göfo values.

  15. Selective breeding for scrapie resistance in sheep

    OpenAIRE

    Cristina Santos Sotomaior; Fernanda Trentini Lopes Ribeiro; Rüdiger Daniel Ollhoff

    2012-01-01

    It is well known that the susceptibility of sheep to scrapie is determined by the host’s prion protein gene (PRNP). PRNP polymorphisms at codons 136 (alanine, A/valine, V), 154 (histidine, H/arginine, R) and 171 (glutamine, Q/histidine, H/arginine, R) are the main determinants of sheep susceptibility/resistance to classical scrapie. There are four major variants of the wild-type ARQ allele: VRQ, AHQ, ARH and ARR. Breeding programs have been developed in the European Union and the USA to incre...

  16. Strategy for larch breeding in Iceland

    Energy Technology Data Exchange (ETDEWEB)

    Eysteinsson, T. [Iceland Forest Service, Egilsstadir (Iceland)

    1995-12-31

    An accelerated breeding program for Siberian larch was initiated in Iceland in 1992. Siberian larch is an important exotic species, but not fully adapted to Icelandic conditions. Selections are made based on adaptive traits such as growth rhythm and resistance to damage as well as form and growth rate. Seed will be produced in containerised, greenhouse orchards, necessitating selection for fecundity to best use expensive greenhouse space. Research will concentrate on developing flower induction treatments for Siberian larch and ways to maximize seed production and viability. 19 refs

  17. Plant breeding and genetics newsletter. No. 14

    International Nuclear Information System (INIS)

    These last six months, the Plant Breeding and Genetics (PBG) Section of the Joint FAO/IAEA Division (NAFA/AGE) implemented five Research Coordination Meetings (RCMs) and one Consultants Meeting for a new Coordinated Research Project (CRP) on 'Molecular tools for quality improvement in vegetatively propagated crops including banana and cassava' (8-11 November 2004, Vienna). Other salient points were the training courses we implemented this semester in the framework of different Technical Cooperation (TC) projects.Details about these activities inside this Newsletter

  18. Breeding of Root and Tuber Crops

    International Nuclear Information System (INIS)

    The root and tuber crops cassava, yams and sweet potato are important in Nigeria and Africa. Breeding methods most appropriate to these crops are discussed in terms of mating systems, creation of source populations, selections. Intervarietal hybridization, interspecific hybridization, and population improvement through cyclic selection and recombination procedures are methods of creating source populations. Factors affecting the effectiveness of selection, and efficient methods of selection to make maximum genetic progress are discussed. Use of selections is briefly stated. Synthetics, composites, or single and double crosses of yam produced from true seed may be used at the farmer level. (author)

  19. Recent and historical recombination in the admixed Norwegian Red cattle breed

    Directory of Open Access Journals (Sweden)

    Grove Harald

    2011-01-01

    Full Text Available Abstract Background Comparison of recent patterns of recombination derived from linkage maps to historical patterns of recombination from linkage disequilibrium (LD could help identify genomic regions affected by strong artificial selection, appearing as reduced recent recombination. Norwegian Red cattle (NRF make an interesting case study for investigating these patterns as it is an admixed breed with an extensively recorded pedigree. NRF have been under strong artificial selection for traits such as milk and meat production, fertility and health. While measures of LD is also crucial for determining the number of markers required for association mapping studies, estimates of recombination rate can be used to assess quality of genomic assemblies. Results A dataset containing more than 17,000 genome-wide distributed SNPs and 2600 animals was used to assess recombination rates and LD in NRF. Although low LD measured by r2 was observed in NRF relative to some of the breeds from which this breed originates, reports from breeds other than those assessed in this study have described more rapid decline in r2 at short distances than what was found in NRF. Rate of decline in r2 for NRF suggested that to obtain an expected r2 between markers and a causal polymorphism of at least 0.5 for genome-wide association studies, approximately one SNP every 15 kb or a total of 200,000 SNPs would be required. For well known quantitative trait loci (QTLs for milk production traits on Bos Taurus chromosomes 1, 6 and 20, map length based on historic recombination was greater than map length based on recent recombination in NRF. Further, positions for 130 previously unpositioned contigs from assembly of the bovine genome sequence (Btau_4.0 found using comparative sequence analysis were validated by linkage analysis, and 28% of these positions corresponded to extreme values of population recombination rate. Conclusion While LD is reduced in NRF compared to some of the

  20. Face Value

    OpenAIRE

    Catherine C. Eckel; Ragan Petrie

    2011-01-01

    There is growing evidence of systematic heterogeneity in behavior by observable characteristics, such as what one would see in a face. We ask, is there informational value in knowing these characteristics in a strategic interaction? Subjects are given the opportunity to purchase a photograph of their partner in the play of a trust game. Not everyone purchases the photo, even at prices as low as $0.20. Senders (first movers in the game) have a more inelastic demand for pictures than responders...