WorldWideScience

Sample records for breeding approach based

  1. Reverse breeding: a novel breeding approach based on engineered meiosis

    NARCIS (Netherlands)

    Dirks, R.; Dun, van K.P.M.; Snoo, de B.; Berg, van den M.; Lelivelt, C.L.C.; Voermans, W.; Woudenberg, L.; Wit, de J.P.C.; Reinink, K.; Schut, J.W.; Jong, de J.H.S.G.M.; Wijnker, T.G.

    2009-01-01

    Reverse breeding (RB) is a novel plant breeding technique designed to directly produce parental lines for any heterozygous plant, one of the most sought after goals in plant breeding. RB generates perfectly complementing homozygous parental lines through engineered meiosis. The method is based on re

  2. Domestic dogs and cancer research: a breed-based genomics approach.

    Science.gov (United States)

    Davis, Brian W; Ostrander, Elaine A

    2014-01-01

    Domestic dogs are unique from other animal models of cancer in that they generally experience spontaneous disease. In addition, most types of cancer observed in humans are found in dogs, suggesting that canines may be an informative system for the study of cancer genetics. Domestic dogs are divided into over 175 breeds, with members of each breed sharing significant phenotypes. The breed barrier enhances the utility of the model, especially for genetic studies where small numbers of genes are hypothesized to account for the breed cancer susceptibility. These facts, combined with recent advances in high-throughput sequencing technologies allows for an unrivaled ability to use pet dog populations to find often subtle mutations that promote cancer susceptibility and progression in dogs as a whole. The meticulous record keeping associated with dog breeding makes the model still more powerful, as it facilitates both association analysis and family-based linkage studies. Key to the success of these studies is their cooperative nature, with owners, scientists, veterinarians and breed clubs working together to avoid the cost and unpopularity of developing captive populations. In this article we explore these principals and advocate for colony-free, genetic studies that will enhance our ability to diagnose and treat cancer in dogs and humans alike.

  3. Germplasm and breeding research of tea plant based on DNA marker approaches

    Institute of Scientific and Technical Information of China (English)

    2008-01-01

    Tea is the most popular non-alcoholic and healthy beverage worldwide.Tea production contributes greatly to the economy and the job opportunities for many countries in Asia and Africa.Meanwhile,the germplasm of tea,with a huge potential for the future of the whole tea industry,is presently one of the most valuable and fundamental materials for tea breeding and tea biotechnology.DNA molecular markers have been proven to be robust and valuable approaches in the studies of genetic diversity and variation,molecular identification,molecular phylogenetics,genetic stability and integrity of tea germplasm,and the genetic linkage map for breeding of tea.In this paper,a brief prospect on the molecular marker studies of tea has been summarized.The purpose is to provide an effective way for undertaking a massive tea germplasm appraisal and evaluation,to develop new applicable and cheap DNA markers,to establish a high density genetic linkage map and analyze the agronomically important QTLs,and finally,to facilitate the marker assisted early selection and shorten breeding procedures in tea.

  4. Localization of canine brachycephaly using an across breed mapping approach.

    Directory of Open Access Journals (Sweden)

    Danika Bannasch

    Full Text Available The domestic dog, Canis familiaris, exhibits profound phenotypic diversity and is an ideal model organism for the genetic dissection of simple and complex traits. However, some of the most interesting phenotypes are fixed in particular breeds and are therefore less tractable to genetic analysis using classical segregation-based mapping approaches. We implemented an across breed mapping approach using a moderately dense SNP array, a low number of animals and breeds carefully selected for the phenotypes of interest to identify genetic variants responsible for breed-defining characteristics. Using a modest number of affected (10-30 and control (20-60 samples from multiple breeds, the correct chromosomal assignment was identified in a proof of concept experiment using three previously defined loci; hyperuricosuria, white spotting and chondrodysplasia. Genome-wide association was performed in a similar manner for one of the most striking morphological traits in dogs: brachycephalic head type. Although candidate gene approaches based on comparable phenotypes in mice and humans have been utilized for this trait, the causative gene has remained elusive using this method. Samples from nine affected breeds and thirteen control breeds identified strong genome-wide associations for brachycephalic head type on Cfa 1. Two independent datasets identified the same genomic region. Levels of relative heterozygosity in the associated region indicate that it has been subjected to a selective sweep, consistent with it being a breed defining morphological characteristic. Genotyping additional dogs in the region confirmed the association. To date, the genetic structure of dog breeds has primarily been exploited for genome wide association for segregating traits. These results demonstrate that non-segregating traits under strong selection are equally tractable to genetic analysis using small sample numbers.

  5. Biotechnological approach in crop improvement by mutation breeding in Indonesia

    Energy Technology Data Exchange (ETDEWEB)

    Soeranto, H.; Sobrizal; Sutarto, Ismiyati; Manurung, Simon; Mastrizal [National Nuclear Energy Agency, Center for Research and Development of Isotope and Radiation Technology, Jakarta (Indonesia)

    2002-02-01

    Mutation breeding has become a proven method of improving crop varieties. Most research on plant mutation breeding in Indonesia is carried out at the Center for Research and Development of Isotope and Radiation Technology, National Nuclear Energy Agency (BATAN). Nowadays, a biotechnological approach has been incorporated in some mutation breeding researches in order to improve crop cultivars. This approach is simply based on cellular totipotency, or the ability to regenerate whole, flowering plants from isolated organs, pieces of tissue, individual cells, and protoplasts. Tissue culture technique has bee extensively used for micro propagation of disease-free plants. Other usage of this technique involves in various steps of the breeding process such as germplasm preservation, clonal propagation, and distant hybridization. Mutation breeding combined with tissue culture technique has made a significant contribution in inducing plant genetic variation, by improving selection technology, and by accelerating breeding time as for that by using anther or pollen culture. In Indonesia, research on mutation breeding combined with tissue culture techniques has been practiced in different crop species including rice, ginger, banana, sorghum etc. Specially in rice, a research on identification of DNA markers linked to blast disease resistance is now still progressing. A compiled report from some research activities is presented in this paper. (author)

  6. Pedigree genotyping: a new pedigree-based approach of QTL identification and allele mining by exploiting breeding material

    NARCIS (Netherlands)

    Weg, van de W.E.; Voorrips, R.E.; Finkers, H.J.; Kodde, L.P.; Meulenbroek, E.J.; Jansen, J.; Bink, M.C.A.M.

    2005-01-01

    To date, molecular markers have been made available for many economically important traits. Unfortunately, lack of knowledge of their allelic variation hampers their full exploitation in commercial breeding programs. These markers have usually been identified in one single cross. Consequently, only

  7. Captive breeding programs based on family groups in polyploid sturgeons.

    Science.gov (United States)

    Boscari, Elisa; Pujolar, Jose Martin; Dupanloup, Isabelle; Corradin, Riccardo; Congiu, Leonardo

    2014-01-01

    In species with long life cycles and discontinuous availability of individuals to reproduction, implementing a long-term captive breeding program can be difficult or impossible. In such cases, managing diversity among familiar groups instead of individuals could become a suitable approach to avoid inbreeding and increase the possibility to accomplish a breeding scheme. This is the case of several sturgeon species including the Adriatic sturgeon, whose recovery depends on the management of a few captive stocks directly descended from the same group of wild parents. In the present study, relatedness among 445 potential breeders was inferred with a novel software for pedigree reconstruction in tetraploids ("BreedingSturgeons"). This information was used to plan a breeding scheme considering familiar groups as breeding units and identifying mating priorities. A two-step strategy is proposed: a short-term breeding program, relying on the 13 remaining F0 individuals of certain wild origin; and a long-term plan based on F1 families. Simulations to evaluate the loss of alleles in the F2 generation under different pairing strategies and assess the number of individuals to breed, costs and logistical aquaculture constraints were performed. The strategy proposed is transferable to the several other tetraploid sturgeon species on the brink of extinction.

  8. Validating selective breeding approaches for disease resistance

    Science.gov (United States)

    Selective breeding of rainbow trout at the USDA/ARS National Center for Cool and Cold Water Aquaculture (NCCCWA) in Leetown, West Virginia is designed to accomplish four goals: 1) define commercially important traits such as disease resistance, growth rate, stress response, and feed efficiency; 2) d...

  9. Breeding of ozone resistant rice: Relevance, approaches and challenges

    International Nuclear Information System (INIS)

    Tropospheric ozone concentrations have been rising across Asia, and will continue to rise during the 21st century. Ozone affects rice yields through reductions in spikelet number, spikelet fertility, and grain size. Moreover, ozone leads to changes in rice grain and straw quality. Therefore the breeding of ozone tolerant rice varieties is warranted. The mapping of quantitative trait loci (QTL) using bi-parental populations identified several tolerance QTL mitigating symptom formation, grain yield losses, or the degradation of straw quality. A genome-wide association study (GWAS) demonstrated substantial natural genotypic variation in ozone tolerance in rice, and revealed that the genetic architecture of ozone tolerance in rice is dominated by multiple medium and small effect loci. Transgenic approaches targeting tolerance mechanisms such as antioxidant capacity are also discussed. It is concluded that the breeding of ozone tolerant rice can contribute substantially to the global food security, and is feasible using different breeding approaches. - Highlights: • Tropospheric ozone affects millions of hectares of rice land. • Ozone affects rice yield and quality. • Breeding approaches to adapt rice to high ozone are discussed. • Challenges in the breeding of ozone resistant rice are discussed. - This review summarizes the effects of tropospheric ozone on rice and outlines approaches and challenges in the breeding of adapted varieties

  10. Conservation priorities of Iberoamerican pig breeds and their ancestors based on microsatellite information.

    Science.gov (United States)

    Cortés, O; Martinez, A M; Cañon, J; Sevane, N; Gama, L T; Ginja, C; Landi, V; Zaragoza, P; Carolino, N; Vicente, A; Sponenberg, P; Delgado, J V

    2016-07-01

    Criollo pig breeds are descendants from pigs brought to the American continent starting with Columbus second trip in 1493. Pigs currently play a key role in social economy and community cultural identity in Latin America. The aim of this study was to establish conservation priorities among a comprehensive group of Criollo pig breeds based on a set of 24 microsatellite markers and using different criteria. Spain and Portugal pig breeds, wild boar populations of different European geographic origins and commercial pig breeds were included in the analysis as potential genetic influences in the development of Criollo pig breeds. Different methods, differing in the weight given to within- and between-breed genetic variability, were used in order to estimate the contribution of each breed to global genetic diversity. As expected, the partial contribution to total heterozygosity gave high priority to Criollo pig breeds, whereas Weitzman procedures prioritized Iberian Peninsula breeds. With the combined within- and between-breed approaches, different conservation priorities were achieved. The Core Set methodologies highly prioritized Criollo pig breeds (Cr. Boliviano, Cr. Pacifico, Cr. Cubano and Cr. Guadalupe). However, weighing the between- and within-breed components with FST and 1-FST, respectively, resulted in higher contributions of Iberian breeds. In spite of the different conservation priorities according to the methodology used, other factors in addition to genetic information also need to be considered in conservation programmes, such as the economic, cultural or historical value of the breeds involved. PMID:27025169

  11. Community-based livestock breeding programmes: essentials and examples.

    Science.gov (United States)

    Mueller, J P; Rischkowsky, B; Haile, A; Philipsson, J; Mwai, O; Besbes, B; Valle Zárate, A; Tibbo, M; Mirkena, T; Duguma, G; Sölkner, J; Wurzinger, M

    2015-04-01

    Breeding programmes described as community-based (CBBP) typically relate to low-input systems with farmers having a common interest to improve and share their genetic resources. CBBPs are more frequent with keepers of small ruminants, in particular smallholders of local breeds, than with cattle, pigs or chickens with which farmers may have easier access to alternative programmes. Constraints that limit the adoption of conventional breeding technologies in low-input systems cover a range of organizational and technical aspects. The analysis of 8 CBBPs located in countries of Latin-America, Africa and Asia highlights the importance of bottom-up approaches and involvement of local institutions in the planning and implementation stages. The analysis also reveals a high dependence of these programmes on organizational, technical and financial support. Completely self-sustained CBBPs seem to be difficult to realize. There is a need to implement and document formal socio-economic evaluations of CBBPs to provide governments and other development agencies with the information necessary for creating sustainable CBBPs at larger scales. PMID:25823840

  12. Community-based livestock breeding programmes: essentials and examples.

    Science.gov (United States)

    Mueller, J P; Rischkowsky, B; Haile, A; Philipsson, J; Mwai, O; Besbes, B; Valle Zárate, A; Tibbo, M; Mirkena, T; Duguma, G; Sölkner, J; Wurzinger, M

    2015-04-01

    Breeding programmes described as community-based (CBBP) typically relate to low-input systems with farmers having a common interest to improve and share their genetic resources. CBBPs are more frequent with keepers of small ruminants, in particular smallholders of local breeds, than with cattle, pigs or chickens with which farmers may have easier access to alternative programmes. Constraints that limit the adoption of conventional breeding technologies in low-input systems cover a range of organizational and technical aspects. The analysis of 8 CBBPs located in countries of Latin-America, Africa and Asia highlights the importance of bottom-up approaches and involvement of local institutions in the planning and implementation stages. The analysis also reveals a high dependence of these programmes on organizational, technical and financial support. Completely self-sustained CBBPs seem to be difficult to realize. There is a need to implement and document formal socio-economic evaluations of CBBPs to provide governments and other development agencies with the information necessary for creating sustainable CBBPs at larger scales.

  13. Advances in protein improvement of spring barley by mutation breeding based on a quantitative genetic approach with integrated selection for protein content, lysine content and grain yield

    International Nuclear Information System (INIS)

    Simultaneous selection for several quantitative breeding characters is demonstrated by an 'integrated selection method' on spring barley with the characters protein content, lysine content and grain yield. A mutation breeding programme (modified pedigree selection) and a cross-breeding programme (pedigree selection) are compared on the basis of different selection procedures (integrated selection, selection using independent culling levels). The differences are demonstrated on a realized gain through selection (RGSsub(r)), relative to parents in M9. Application of 'integrated selection' is demonstrated in two stages, resulting in a general selection model for protein characters in relation to grain yield. Significant mutants selected in M9 on the basis of improved utilizable protein yield (UPY = gram utilizable protein/m2) are compared with their mutagenic origin. Differences in mutagenic efficiency among varieties and among types and numbers of repeated treatments are discussed. A significant improvement using integrated selection for UPY is found to be possible in the range of 10 to 15%, compared with parents. Improvement is observed in three significant fractions: (1) protein improved at higher rates than grain yield, (2) protein improved at equal rates with grain yield, and (3) protein improved at lower rates than grain yield. All mutants selected from the mutation breeding programme were found to inherit the three characters quantitatively. Selection between families (M2 to M7) and within families (M8 to M9) was effective at both stages, provided genetic advance was determined by the significant selection rates used throughout the entire selection process. (author)

  14. Approaches in breeding for high quality protein maize

    Directory of Open Access Journals (Sweden)

    Denić Miloje

    2008-01-01

    Full Text Available Maize is the principal crop and major staple food in the most African and South American countries. The main problem in human nutrition in developing countries, and in livestock feed in developed countries, is insufficient production and poor quality of cereal proteins. In the case of maize, due to the very low content of essential amino acids lysine and tryptophan in grain endosperm, biological value is very low, which is main limiting factor of common maize in human nutrition and feeding of monogastric animals. Quality protein maize (QPM can help in solving of this problem. Maize production also faces serious constraints caused by agro-ecological conditions and poor socio-economic situation. To alleviate the effect of the constraints, selected genotypes with more desirable traits and appropriate field-plot techniques to create multiple-stress conditions, were used. It was found that, in downy mildew nursery distance up to 35 m from spreader plot is providing sufficient down load of spores for plant infection, provided that the testing breeding materials are planted towards to down-stream direction of the dominant wind. Using these breeding approaches large number of early, white and flint synthetics, composites and inbred lines were created with resistance or tolerance to downy mildew (DMR, maize streak virus (SR and drought (DT. Created genotypes exhibited very good kernel modification and yield potential under low and normal inputs. In the case of synthetics and composites, besides tolerance to multiple stress factors, they were competing in yield with local QPM and normal maize checks. In the case of created inbred lines high combining ability was exhibited both in non-conventional and conventional maize hybrids. Trial data revealed that in the most cases the best entries were over-yielding the best checks.

  15. Empowering breeding programs with new approaches to overcome constraints for selecting superior quality traits of rice

    NARCIS (Netherlands)

    Calingacion, M.N.

    2015-01-01

    Empowering breeding programs with new approaches to overcome constraints for selecting superior quality traits of rice Mariafe N. Calingacion Most rice breeding programs have focused on improving agronomic traits such as yield, while enhancing grain quality traits such as flavour an

  16. Induced mutations and marker assisted breeding approaches to crop improvement

    International Nuclear Information System (INIS)

    The crop improvement programme at the Nuclear Institute for Agriculture and Biology involves use of mutation breeding techniques, particularly for improving plant architecture, maturity, period and induction/incorporation of genes for biotic and abiotic tolerance in important food and fibre crops. Recent advances in molecular genetics offered us new techniques to elucidate differences at the molecular level in the mutated genes with the help of marker assisted breeding techniques, i.e. restriction fragment length polymorphism (RFLP) and random amplified polymorphic DNA (RAPD). Efforts are therefore being made to incorporate salt tolerance in cultivated wheat and rice from their wild relatives through wide hybridization. Thirteen improved varieties of rice, cotton, mungbeam and chickpea have been developed using the mutation breeding technique and then released for commercial cultivation. These improved varieties have played a significant role in increasing agricultural production in the country. In addition, a wealth of genetic variability has been developed for use in the cross-breeding programmes, and a few varieties of cotton have been developed in Pakistan with an induced mutation as one of their parents. Marker assisted wide hybridization in rice has helped to monitor the flow of genetic material carrying salt tolerance from wild to cultivated species. In wheat, DNA fingerprinting has been attempted to differentiate salt tolerant line (hybrids) from their parents

  17. Residual feed intake and breeding approaches for enteric methane mitigation

    NARCIS (Netherlands)

    Berry, D.P.; Lassen, J.; Haas, de Y.

    2015-01-01

    The expanding world human population will require greater food production within the constraints of increasing societal pressure to minimize the resulting impact on the environment. Breeding goals in the past have achieved substantial gains in environmental load per unit product produced, despite no

  18. Genome-based establishment of a high-yielding heterotic pattern for hybrid wheat breeding.

    Science.gov (United States)

    Zhao, Yusheng; Li, Zuo; Liu, Guozheng; Jiang, Yong; Maurer, Hans Peter; Würschum, Tobias; Mock, Hans-Peter; Matros, Andrea; Ebmeyer, Erhard; Schachschneider, Ralf; Kazman, Ebrahim; Schacht, Johannes; Gowda, Manje; Longin, C Friedrich H; Reif, Jochen C

    2015-12-22

    Hybrid breeding promises to boost yield and stability. The single most important element in implementing hybrid breeding is the recognition of a high-yielding heterotic pattern. We have developed a three-step strategy for identifying heterotic patterns for hybrid breeding comprising the following elements. First, the full hybrid performance matrix is compiled using genomic prediction. Second, a high-yielding heterotic pattern is searched based on a developed simulated annealing algorithm. Third, the long-term success of the identified heterotic pattern is assessed by estimating the usefulness, selection limit, and representativeness of the heterotic pattern with respect to a defined base population. This three-step approach was successfully implemented and evaluated using a phenotypic and genomic wheat dataset comprising 1,604 hybrids and their 135 parents. Integration of metabolomic-based prediction was not as powerful as genomic prediction. We show that hybrid wheat breeding based on the identified heterotic pattern can boost grain yield through the exploitation of heterosis and enhance recurrent selection gain. Our strategy represents a key step forward in hybrid breeding and is relevant for self-pollinating crops, which are currently shifting from pure-line to high-yielding and resilient hybrid varieties. PMID:26663911

  19. Empowering breeding programs with new approaches to overcome constraints for selecting superior quality traits of rice

    OpenAIRE

    Calingacion, M.N.

    2015-01-01

    Empowering breeding programs with new approaches to overcome constraints for selecting superior quality traits of rice Mariafe N. Calingacion Most rice breeding programs have focused on improving agronomic traits such as yield, while enhancing grain quality traits such as flavour and aroma, especially of non-fragrant rices, has not been given high priority. In this study, we utilised a multi-disciplinary approach to understand better quality traits of aroma and flavour in rice grains, and to ...

  20. Analysis on potential approaches to utilize genic male sterility in plant hybrid breeding

    Institute of Scientific and Technical Information of China (English)

    Li Xinqi; Yuan Longping; Xiao Jinhua; Xie fangming

    2005-01-01

    @@ The exploitation of plant heterosis is an effective approach to increasing the food production. The heterotic hybrid varieties in major crops such as rice,cotton, and wheat can show more than 20% yield advantage over best conventional ones under the same cultivation conditions. The difficulties in breeding elite male sterile lines and the inconveniences for commercial hybrid seed production are hampering the development of hybrid crops breeding.

  1. Stakeholder involvement in establishing a milk quality sub-index in dairy cow breeding goals: a Delphi approach.

    Science.gov (United States)

    Henchion, M; McCarthy, M; Resconi, V C; Berry, D P; McParland, S

    2016-05-01

    The relative weighting on traits within breeding goals are generally determined by bio-economic models or profit functions. While such methods have generally delivered profitability gains to producers, and are being expanded to consider non-market values, current approaches generally do not consider the numerous and diverse stakeholders that affect, or are affected, by such tools. Based on principles of respondent anonymity, iteration, controlled feedback and statistical aggregation of feedback, a Delphi study was undertaken to gauge stakeholder opinion of the importance of detailed milk quality traits within an overall dairy breeding goal for profit, with the aim of assessing its suitability as a complementary, participatory approach to defining breeding goals. The questionnaires used over two survey rounds asked stakeholders: (a) their opinion on incorporating an explicit sub-index for milk quality into a national breeding goal; (b) the importance they would assign to a pre-determined list of milk quality traits and (c) the (relative) weighting they would give such a milk quality sub-index. Results from the survey highlighted a good degree of consensus among stakeholders on the issues raised. Similarly, revelation of the underlying assumptions and knowledge used by stakeholders to make their judgements illustrated their ability to consider a range of perspectives when evaluating traits, and to reconsider their answers based on the responses and rationales given by others, which demonstrated social learning. Finally, while the relative importance assigned by stakeholders in the Delphi survey (4% to 10%) and the results of calculations based on selection index theory of the relative emphasis that should be placed on milk quality to halt any deterioration (16%) are broadly in line, the difference indicates the benefit of considering more than one approach to determining breeding goals. This study thus illustrates the role of the Delphi technique, as a complementary

  2. Mixed model approaches for the identification of QTLs within a maize hybrid breeding program.

    Science.gov (United States)

    van Eeuwijk, Fred A; Boer, Martin; Totir, L Radu; Bink, Marco; Wright, Deanne; Winkler, Christopher R; Podlich, Dean; Boldman, Keith; Baumgarten, Andy; Smalley, Matt; Arbelbide, Martin; ter Braak, Cajo J F; Cooper, Mark

    2010-01-01

    Two outlines for mixed model based approaches to quantitative trait locus (QTL) mapping in existing maize hybrid selection programs are presented: a restricted maximum likelihood (REML) and a Bayesian Markov Chain Monte Carlo (MCMC) approach. The methods use the in-silico-mapping procedure developed by Parisseaux and Bernardo (2004) as a starting point. The original single-point approach is extended to a multi-point approach that facilitates interval mapping procedures. For computational and conceptual reasons, we partition the full set of relationships from founders to parents of hybrids into two types of relations by defining so-called intermediate founders. QTL effects are defined in terms of those intermediate founders. Marker based identity by descent relationships between intermediate founders define structuring matrices for the QTL effects that change along the genome. The dimension of the vector of QTL effects is reduced by the fact that there are fewer intermediate founders than parents. Furthermore, additional reduction in the number of QTL effects follows from the identification of founder groups by various algorithms. As a result, we obtain a powerful mixed model based statistical framework to identify QTLs in genetic backgrounds relevant to the elite germplasm of a commercial breeding program. The identification of such QTLs will provide the foundation for effective marker assisted and genome wide selection strategies. Analyses of an example data set show that QTLs are primarily identified in different heterotic groups and point to complementation of additive QTL effects as an important factor in hybrid performance.

  3. Residual feed intake and breeding approaches for enteric methane mitigation

    DEFF Research Database (Denmark)

    Berry, Donagh P; Lassen, Jan; de Hass, Y

    2015-01-01

    The expanding world human population will require greater food production within the constraints of increasing societal pressure to minimize the resulting impact on the environment. Breeding goals in the past have achieved substantial gains in environmental load per unit product produced, despite...... no explicit inclusion of environmental load (and in most instances, even feed efficiency) in these goals. Heritability of feed intake-related traits in cattle is moderate to high, implying that relatively high accuracy of selection can be achieved with relatively low information content per animal; however......, the genetic variation in feed intake independent of animal performance is expectedly less than other performance traits. Nonetheless, exploitable genetic variation does exist and, if properly utilized, could augment further gains in feed efficiency. Genetic parameters for enteric methane (CH4) emissions...

  4. Physiological breeding.

    Science.gov (United States)

    Reynolds, Matthew; Langridge, Peter

    2016-06-01

    Physiological breeding crosses parents with different complex but complementary traits to achieve cumulative gene action for yield, while selecting progeny using remote sensing, possibly in combination with genomic selection. Physiological approaches have already demonstrated significant genetic gains in Australia and several developing countries of the International Wheat Improvement Network. The techniques involved (see Graphical Abstract) also provide platforms for research and refinement of breeding methodologies. Recent examples of these include screening genetic resources for novel expression of Calvin cycle enzymes, identification of common genetic bases for heat and drought adaptation, and genetic dissection of trade-offs among yield components. Such information, combined with results from physiological crosses designed to test novel trait combinations, lead to more precise breeding strategies, and feed models of genotype-by-environment interaction to help build new plant types and experimental environments for future climates. PMID:27161822

  5. Genetic comparison of breeding schemes based on semen importation and local breeding schemes: framework and application to Costa Rica.

    Science.gov (United States)

    Vargas, B; van Arendonk, J A M

    2004-05-01

    Local breeding schemes for Holstein cattle of Costa Rica were compared with the current practice based on continuous semen importation (SI) by deterministic simulation. Comparison was made on the basis of genetic response and correlation between breeding goals. A local breeding goal was defined on the basis of prevailing production circumstances and compared against a typical breeding goal for an exporting country. Differences in genetic response were strategies because of the reduction in the rate of genetic response when SI was used. When the genetic correlation was assumed equal to 0.75, the genetic response achieved with SI was reduced at the same level as local PT. When an initial difference in average genetic merit of the populations was assumed, this only had a temporal effect on the relative ranking of strategies, which is reverted after some years of selection because the rate of change in genetic responses remains unchanged. Given that the actual levels of genetic correlation between countries may be around 0.60, it was concluded that a local breeding scheme based on a nucleus herd could provide better results than the current strategy based on SI. PMID:15290999

  6. Heterosis in plants: Manifestation in early seed development and prediction approaches to assist hybrid breeding

    Institute of Scientific and Technical Information of China (English)

    THIEMANN Alexander; MEYER Stephanie; SCHOLTEN Stefan

    2009-01-01

    Heterosis, or hybrid vigour, describes the superior performance of heterozygous hybrid individuals compared with their homozygous parental inbred lines. Although heterosis has been intensively used in plant breeding, the molecular and genetic mechanism underlying the phenomenon remains largely unknown. During the last years numerous laboratories initiated genomic approaches with new, often genome wide tools toward the elucidation of the molecular basis of heterosis. Various studies described differences in genome organization and gene expression of hybrids and their parental inbred lines. In maize, a considerable loss of co-linearity at many loci between different inbred lines was observed. Expression profile comparisons between inbred lines and hybrids revealed complex transcrip-tional networks specific for different developmental stages and tissues mainly in maize (Zea mays), rice (Oryza sativa) and Arabidopsis (Arabidopsis thaliana). Allele-specific expression data resolved the relative parental contributions and allowed figuring out the regulatory basis for expression variation in hybrids. Integrating all these complex expression data might help to get an idea about the molecular basis of heterosis. Thereby molecular processes during early seed development shortly after fertilization might be of particular importance, because the allelic interplay has to be coordinated after the unification of two diverse genomes and these processes might contribute to establish the basis for future performance of the sporophyte. Besides these fundamental interests in the molecular basis and manifestation of hybrid vigour applied aspects of the phenomenon are of high importance to support plant breeding and agriculture. Prediction methods are of special interest to identify the most promising parental lines of hybrid varieties, greatly reducing the financial effort and increasing the efficiency to develop new hybrid cultivars. Until now, most prediction approaches were based on

  7. Breeding approaches in simultaneous selection for multiple stress tolerance of maize in tropical environments

    Directory of Open Access Journals (Sweden)

    Denić M.

    2007-01-01

    Full Text Available Maize is the principal crop and major staple food in the most countries of Sub-Saharan Africa. However, due to the influence of abiotic and biotic stress factors, maize production faces serious constraints. Among the agro-ecological conditions, the main constraints are: lack and poor distribution of rainfall; low soil fertility; diseases (maize streak virus, downy mildew, leaf blights, rusts, gray leaf spot, stem/cob rots and pests (borers and storage pests. Among the socio-economic production constraints are: poor economy, serious shortage of trained manpower; insufficient management expertise, lack of use of improved varieties and poor cultivation practices. To develop desirable varieties, and thus consequently alleviate some of these constraints, appropriate breeding approaches and field-based methodologies in selection for multiple stress tolerance, were implemented. These approaches are mainly based on: a Crossing selected genotypes with more desirable stress tolerant and other agronomic traits; b Using the disease/pest spreader row method, combined with testing and selection of created progenies under strong to intermediate pressure of drought and low soil fertility in nurseries; and c Evaluation of the varieties developed in multi-location trials under low and "normal" inputs. These approaches provide testing and selection of large number of progenies, which is required for simultaneous selection for multiple stress tolerance. Data obtained revealed that remarkable improvement of the traits under selection was achieved. Biggest progress was obtained in selection for maize streak virus and downy mildew resistance, flintiness and earliness. In the case of drought stress, statistical analyses revealed significant negative correlation between yield and anthesis-silking interval, and between yield and days to silk, but positive correlation between yield and grain weight per ear.

  8. Animal breeding in developing countries based on gene-based selections

    International Nuclear Information System (INIS)

    limitations. It would be feasible in many cases to undertake testing of just two breeds from two different countries (or regions). Many countries would see the advantage of a reciprocal exchange of germplasm with another country, which could overcome concerns related to benefit sharing in many cases. The critical question is which two breeds would maximise the probability of being able to develop a better genotype than currently exists? Obviously choice of breeds will involve careful examination of existing data on breed performance and the environments under which they evolved. Where it is desired that a particular trait be further improved one consideration would be the likelihood that two breeds have evolved different mechanisms of adaptation, such that a higher level of adaptation (and/or performance and/or resistance) could readily be developed from a cross between them. In this case one would seek breeds that have suitable phenotypes in the targeted environment, yet are as genetically distant from each other as possible. Genetic distances among existing breeds can be estimated using molecular genetic markers and a global survey of distances among all the breeds of each species need be completed only once. Having selected two breeds it will be important to test the hypothesis that they carry different genetic mechanisms controlling the desirable traits, before proceeding with a breeding program. A suitable method for testing that hypothesis is to perform a genome-wide interval mapping for QTL based on anonymous genetic markers in an F2 and/or backcrosses between the two breeds. Based on whether or not the hypothesis is confirmed, the size of the QTL detected and the performance of the pure breeds and the F2 or backcrosses, an informed decision can then be taken on a suitable genetic improvement program. The outcome might be to utilise one of the purebreds, or to develop a crossbreeding program, or to develop a new breed through selection from a crossbred or backcross

  9. Microsatellite based genetic diversity and relationships among ten Creole and commercial cattle breeds raised in Brazil

    Directory of Open Access Journals (Sweden)

    Almeida Leonardo D

    2007-12-01

    Full Text Available Abstract Background Brazil holds the largest commercial cattle populations worldwide. Local cattle breeds can be classified according to their origin, as exotic or Creole. Exotic breeds imported in the last 100 years, both zebuine and taurine, currently make up the bulk of the intensively managed populations. Locally adapted Creole breeds, originated from cattle introduced by the European conquerors derive from natural selection and events of breed admixture. While historical knowledge exists on the Brazilian Creole breeds very little is known on their genetic composition. The objective of this study was to assess the levels of genetic diversity, phylogenetic relationships and patterns of taurine/zebuine admixture among ten cattle breeds raised in Brazil. Results Significant reduction of heterozygosity exists due both to within-population inbreeding and to breed differentiation in both subspecies (taurine and zebuine. For taurine breeds the number of markers that contribute to breed differentiation is larger than for zebuine. A consistently similar number of alleles was seen in both subspecies for all microsatellites. Four Creole breeds were the most genetically diverse followed by the zebuine breeds, the two specialized taurine breeds and the Creole Caracu. Pairwise genetic differentiation were all significant indicating that all breeds can be considered as genetically independent entities. A STRUCTURE based diagram indicated introgression of indicine genes in the local Creole breeds and suggested that occasional Creole introgression can be detected in some Zebuine animals. Conclusion This study reports on a comprehensive study of the genetic structure and diversity of cattle breeds in Brazil. A significant amount of genetic variation is maintained in the local cattle populations. The genetic data show that Brazilian Creole breeds constitute an important and diverse reservoir of genetic diversity for bovine breeding and conservation. The

  10. Identification of smallholder farmers and pastoralists' preferences for sheep breeding traits: choice model approach.

    Science.gov (United States)

    Duguma, G; Mirkena, T; Haile, A; Okeyo, A M; Tibbo, M; Rischkowsky, B; Sölkner, J; Wurzinger, M

    2011-12-01

    homogeneous preferences were investigated. In the pastoral production system, attention was given to coat color of both breeding rams and ewes, favoring brown and white colors over black. Ram libido influenced producers' decisions in Bonga, Horro and Menz areas. The influence of milk yield and twinning on respondents' decision making was high in Afar and Horro, respectively. Breeders in all areas attempt to combine production and reproduction traits as well as they can in order to maximize benefits from their sheep. The elicited measurable objective traits were used to design alternative community-based sheep breeding plans for the four indigenous sheep breeds in their production environments that have been implemented since.

  11. The differentiation of camel breeds based on meat measurements using discriminant analysis.

    Science.gov (United States)

    Al-Atiyat, Raed Mahmoud; Suliman, Gamal; AlSuhaibani, Entissar; El-Waziry, Ahmad; Al-Owaimer, Abdullah; Basmaeil, Saeid

    2016-06-01

    The meat productivity of camel in the tropics is still under investigation for identification of better meat breed or type. Therefore, four one-humped Saudi Arabian (SA) camel breeds, Majaheem, Maghateer, Hamrah, and Safrah were experimented in order to differentiate them from each other based on meat measurements. The measurements were biometrical meat traits measured on six intact males from each breed. The results showed higher values of the Majaheem breed than that obtained for the other breeds except few cases such dressing percentage and rib-eye area. In differentiation analysis, the most discriminating meat variables were myofibrillar protein index, meat color components (L* and a*, b*), and cooking loss. Consequently, the Safrah and the Majaheem breeds presented the largest dissimilarity as evidenced by their multivariate means. The canonical discriminant analysis allowed an additional understanding of the differentiation between breeds. Furthermore, two large clusters, one formed by Hamrah and Maghateer in one group along with Safrah. These classifications may assign each breed into one cluster considering they are better as meat producers. The Majaheem was clustered alone in another cluster that might be a result of being better as milk producers. Nevertheless, the productivity type of the camel breeds of SA needs further morphology and genetic descriptions. PMID:26922738

  12. Integrated genomics and molecular breeding approaches for dissecting the complex quantitative traits in crop plants

    Indian Academy of Sciences (India)

    Alice Kujur; Maneesha S Saxena; Deepak Bajaj; Laxmi; Swarup K Parida

    2013-12-01

    The enormous population growth, climate change and global warming are now considered major threats to agriculture and world’s food security. To improve the productivity and sustainability of agriculture, the development of high-yielding and durable abiotic and biotic stress-tolerant cultivars and/climate resilient crops is essential. Henceforth, understanding the molecular mechanism and dissection of complex quantitative yield and stress tolerance traits is the prime objective in current agricultural biotechnology research. In recent years, tremendous progress has been made in plant genomics and molecular breeding research pertaining to conventional and next-generation whole genome, transcriptome and epigenome sequencing efforts, generation of huge genomic, transcriptomic and epigenomic resources and development of modern genomics-assisted breeding approaches in diverse crop genotypes with contrasting yield and abiotic stress tolerance traits. Unfortunately, the detailed molecular mechanism and gene regulatory networks controlling such complex quantitative traits is not yet well understood in crop plants. Therefore, we propose an integrated strategies involving available enormous and diverse traditional and modern –omics (structural, functional, comparative and epigenomics) approaches/resources and genomics-assisted breeding methods which agricultural biotechnologist can adopt/utilize to dissect and decode the molecular and gene regulatory networks involved in the complex quantitative yield and stress tolerance traits in crop plants. This would provide clues and much needed inputs for rapid selection of novel functionally relevant molecular tags regulating such complex traits to expedite traditional and modern marker-assisted genetic enhancement studies in target crop species for developing high-yielding stress-tolerant varieties.

  13. Detection of potential mosquito breeding sites based on community sourced geotagged images

    Science.gov (United States)

    Agarwal, Ankit; Chaudhuri, Usashi; Chaudhuri, Subhasis; Seetharaman, Guna

    2014-06-01

    Various initiatives have been taken all over the world to involve the citizens in the collection and reporting of data to make better and informed data-driven decisions. Our work shows how the geotagged images collected through the general population can be used to combat Malaria and Dengue by identifying and visualizing localities that contain potential mosquito breeding sites. Our method first employs image quality assessment on the client side to reject the images with distortions like blur and artifacts. Each geotagged image received on the server is converted into a feature vector using the bag of visual words model. We train an SVM classifier on a histogram-based feature vector obtained after the vector quantization of SIFT features to discriminate images containing either a small stagnant water body like puddle, or open containers and tires, bushes etc. from those that contain flowing water, manicured lawns, tires attached to a vehicle etc. A geographical heat map is generated by assigning a specific location a probability value of it being a potential mosquito breeding ground of mosquito using feature level fusion or the max approach presented in the paper. The heat map thus generated can be used by concerned health authorities to take appropriate action and to promote civic awareness.

  14. An Efficient Approach of Creating New Genetic Resources in Hybrid Rice Breeding

    Institute of Scientific and Technical Information of China (English)

    2001-01-01

    @@It is more and more important to create new genetic resources in hybrid rice breedding by using the tertiary and the forth gene pool through biotechnologic methods after the success of the utilization of inter-subspecific heterosis. We have established a simple procedure which is modified from that of Pena to transfer exogenous DAN into rice. When the recipient plant has undergone meiosis, exogenous DNA is injected into the upermost internode of a stem, the position just under the panicle base. In the next generation (D1), variants are found at a rate from 10-3to 10-1.

  15. Pollen Sterility—A Promising Approach to Gene Confinement and Breeding for Genetically Modified Bioenergy Crops

    Directory of Open Access Journals (Sweden)

    Albert P. Kausch

    2012-10-01

    Full Text Available Advanced genetic and biotechnology tools will be required to realize the full potential of food and bioenergy crops. Given current regulatory concerns, many transgenic traits might never be deregulated for commercial release without a robust gene confinement strategy in place. The potential for transgene flow from genetically modified (GM crops is widely known. Pollen-mediated transfer is a major component of gene flow in flowering plants and therefore a potential avenue for the escape of transgenes from GM crops. One approach for preventing and/or mitigating transgene flow is the production of trait linked pollen sterility. To evaluate the feasibility of generating pollen sterility lines for gene confinement and breeding purposes we tested the utility of a promoter (Zm13Pro from a maize pollen-specific gene (Zm13 for driving expression of the reporter gene GUS and the cytotoxic gene barnase in transgenic rice (Oryza sativa ssp. Japonica cv. Nipponbare as a monocot proxy for bioenergy grasses. This study demonstrates that the Zm13 promoter can drive pollen-specific expression in stably transformed rice and may be useful for gametophytic transgene confinement and breeding strategies by pollen sterility in food and bioenergy crops.

  16. Is the Murciano-Granadina a single goat breed? A molecular genetics approach

    Directory of Open Access Journals (Sweden)

    A.M. Martínez

    2010-10-01

    Full Text Available The population structure of the Murciano-Granadina breed was determined using 25 microsatellites from 266 goats of seven populations. The results of the genetic differentiation analysis showed that it is possible to differentiate the Murciana and Granadina populations even though a low F ST value (0.0432 had been obtained. Individuals could be assigned to their populations with a success rate of more than 80%. Bayesian-based clustering analysis of allele frequencies and multivariate analysis revealed that Murciana and Granadina populations were grouped in different clusters since K=3. The results demonstrate that Murciana and Granadina are still two different genetic groups included into Murciano-Granadina denomination. There is the opportunity to the genetically manage these populations, under a single herd-book but adding the necessary modifications to respect the conservation of the genetic diversity based on the use of multibreed models of genetic evaluation.

  17. Arbitrarily amplified DNA: New molecular approaches to plant breeding, ecology and evolution

    International Nuclear Information System (INIS)

    Several DNA fingerprinting techniques that use arbitrary primers to characterize, scan and tag genomic DNA were optimized and used to study plants and microbial pathogens. The generated arbitrarily amplified DNA (AAD) profiles could be tailored in their complexity and polymorphic content, allowing analysis of closely related organisms, such as vegetatively-propagated horticultural crops or clonal fungal populations. AAD markers were used in cultivar and strain identification, map-based cloning, and marker-assisted breeding, sometimes as sequence-tagged sites. Phenetic analysis using parsimony, cluster, and numerical methods was applied successfully to the identification of genetic relationships in turfgrass species such as bermudagrass, woody plants such as dogwoods, and floricultural species such as petunia and chrysanthemum. AAD profiles were used to measure for the first time a genome-wide mutation rate, directly in a plant. Mutation rates in vegetatively propagated bermudagrass were comparable to those in human, mice, fruit flies, and worms. In combination with established tools used in molecular systematics (e.g. rDNA sequence analysis), AAD markers tracked the introduction of exotic dogwood anthracnose-causing fungi in North America. As part of a breeding effort to combat dogwood diseases, AAD was used in pseudo-testcross mapping of the tree at the intra-specific level. Markers were efficiently generated despite the close relatedness of parental dogwood material. Finally, DNA markers and tags were also generated in soybean, and were used to construct high density maps and walk towards defined genomic regions in the positional cloning of the supernodulation nts-1 symbiotic gene. (author)

  18. Kinship-based management strategies for captive breeding programs when pedigrees are unknown or uncertain.

    Science.gov (United States)

    Putnam, Andrea S; Ivy, Jamie A

    2014-01-01

    Zoo-based captive breeding programs typically rely on accurate pedigrees to maintain long-term population genetic diversity and prevent close inbreeding. For many mixed-sex captive populations, it is difficult to assign parentage of offspring with certainty without conducting DNA-based parentage analyses. Using the demographic parameters of a North American captive population of Arabian oryx (Oryx leucoryx), 2 kinship-based breeding-pair selection strategies were modeled for their performance in handling pedigrees with varying degrees of parentage uncertainty. We also compared these strategies with 2 nonkinship-based methods. Pedigrees simulated under different management strategies were compared for their long-term ability to maintain gene diversity (GD) and avoid inbreeding. For the Arabian oryx, results indicate that recording multiple possible parents instead of removing the unknown genomic portion of the pedigree can more efficiently utilize all animals available for breeding without compromising GD and inbreeding avoidance. Both kinship-based breeding-pair selection strategies significantly outperformed the nonkinship-based strategies.

  19. Tritium breeding in fusion reactors

    Energy Technology Data Exchange (ETDEWEB)

    Abdou, M.A.

    1982-10-01

    Key technological problems that influence tritium breeding in fusion blankets are reviewed. The breeding potential of candidate materials is evaluated and compared to the tritium breeding requirements. The sensitivity of tritium breeding to design and nuclear data parameters is reviewed. A framework for an integrated approach to improve tritium breeding prediction is discussed with emphasis on nuclear data requirements.

  20. DNA Microarray as Part of a Genomic-Assisted Breeding Approach

    DEFF Research Database (Denmark)

    Vincze, Éva; Bowra, Steve

    2010-01-01

    In the struggle to achieve global food security, crop breeding retains an important role in crop production. A current trend is the diversification of the aims of crop production, to include an increased awareness of aspects and consequences of food quality. The added emphasis on food and feed...... quality made crop breeding more challenging and required a combination of new tools. We illustrate these concepts by taking examples from barley, one of the most ancient of domesticated grains with a diverse profile of utilisation (feed, brewing, new nutritional uses). Genomic-assisted breeding (GAB...

  1. Mixed model approaches for the identification of QTLs within a maize hybrid breeding program.

    NARCIS (Netherlands)

    Eeuwijk, van F.A.; Boer, M.; Totir, L.; Bink, M.C.A.M.; Wright, D.; Winkler, C.; Podlich, D.; Boldman, K.; Baumgarten, R.; Smalley, M.; Arbelbide, M.; Braak, ter C.J.F.; Cooper, M.

    2010-01-01

    Two outlines for mixed model based approaches to quantitative trait locus (QTL) mapping in existing maize hybrid selection programs are presented: a restricted maximum likelihood (REML) and a Bayesian Markov Chain Monte Carlo (MCMC) approach. The methods use the in-silico-mapping procedure developed

  2. Genetic Diversity of Bali Cattle Based on Microsatellite Marker in Indonesian Breeding Centre

    Directory of Open Access Journals (Sweden)

    W. A. Septian

    2015-04-01

    Full Text Available Genetics characterization in livestock based on microsatellite has been widely implemented including for Bali cattle in three different breeding centres in Indonesia. This study aimed to determine diversity of Bali cattle microsatellites in three breeding centers namely BPTU Bali cattle in Bali, BPT-HMT Serading Sumbawa in West Nusa Tenggara, and Village Breeding Center in South Sulawesi. The number of animals used in this study was 95 head of cattle consisted of 32 heads from BPTU Bali Province, 32 heads from BPT-HMT Serading Sumbawa, and 31 heads from Village Barru Breeding Center Barru distric. Microsatellite loci used to determine the diversity was the locus SPS115, INRA037, MM12, and ETH185 based on flourescently labeled fragment method. Data analysis of microsatellite in Bali cattle at three different locations was performed by using POPGEN 1.2, Cervus, and POPTREE2 programs. The results showed that microsatellite diversity in Bali cattle detected 32 alleles from three different locations, and there were specific alleles at each location. Average values of observed heterozygosity (Ho and expected heterozygosity (He were 0.418 and 0.604 respectively, while the average value of polymorphism informative content (PIC was 0.579. The Hardy-Weinberg equilibrium in general suggested that the loci used in the Bali cattle in three populations were in equilibrium, except INRA037 and ETH185. The genetic diversity between populations of Bali cattle was 0.033 (3%, while the inbreeding coefficient index in all populations was 0.296 (29.6 %. Bali cattle phylogeny tree with three populations showed that the populations of Bali cattle in BPTU Bali and VBC Barru had close genetic distance compared to the population of Bali cattle in BPT-HMT Serading Sumbawa. The results of this study provide information that the characteristics of Bali cattle breeding centers in three locations are different, so we need a directed breeding program in each population.

  3. Genome-based establishment of a high-yielding heterotic pattern for hybrid wheat breeding

    OpenAIRE

    Zhao, Yusheng; Li, Zuo; Liu, Guozheng; Jiang, Yong; Maurer, Hans Peter; Würschum, Tobias; Mock, Hans-Peter; Matros, Andrea; Ebmeyer, Erhard; Schachschneider, Ralf; Kazman, Ebrahim; Schacht, Johannes; Gowda, Manje; Longin, C Friedrich H; Reif, Jochen C.

    2015-01-01

    Selfing species wheat are bred as pure-line varieties with stagnating yield growths. In contrast, selection gain in maize is high, owing to massive investment sustained by hybrid seed sales, coupled with an efficient exploitation of hybrid vigor. We have developed a three-step strategy for establishing a heterotic pattern, which was one of the central unsolved challenges for initiating hybrid breeding programs. The benefits of our approach are demonstrated using data for wheat, but the strate...

  4. Phenotypic diversity of Tuscany’s endangered sheep breeds: a canonical discriminant approach

    Directory of Open Access Journals (Sweden)

    R. Bozzi

    2011-03-01

    Full Text Available The determination of the degree of differentiation of animal populations at breed level is an important issue for conservation purposes. Morphometric divergences can be an indicator of adaptative or selective differences between breeds. In fact, due to the natural and artificial selection that continuously acts on the adaptative traits, the determination of the level of divergence of the quantitative traits across several populations, allows to make inferences on the degree of adaptation to a certain environment or on the productive specialization of a given population. Somatic measures have already been used to estimate the divergence in Italian cattle (Camussi et al., 1985, goat (Cicogna et al., 1995, Herrera et al. 1996 and sheep breeds (Panella et al., 1993...

  5. Lithium-based oxide ceramics for tritium-breeding applications

    International Nuclear Information System (INIS)

    Material preparation techniques, crystallographic data, phase diagrams, metal compatibility, and thermal properties have been assembled for the lithium-based oxide ceramics designated as potential solid tritium breeders for fusion devices. The materials discussed in this report include: Li2O, β-Li5AlO4, γ-LiAlO2, Li4SiO4, Li2SiO3, Li4TiO4, Li2TiO3, Li8ZrO6, Li4ZrO4, and Li2ZrO3. The thermal properties covered were vaporization, thermal conductivity, specific heat, and linear thermal expansion. There has been no attempt to rank the above mentioned candidates, but rather to merely indicate points that must be considered when using the various materials as solid breeders. These encompass low lithium atom densities, destructive phase transformations, a higher thermal expansion, low thermal conductivity, excessive vaporization at low temperatures, corrosive nature toward metals and difficulty in sample preparation

  6. Genomics-assisted breeding in fruit trees.

    Science.gov (United States)

    Iwata, Hiroyoshi; Minamikawa, Mai F; Kajiya-Kanegae, Hiromi; Ishimori, Motoyuki; Hayashi, Takeshi

    2016-01-01

    Recent advancements in genomic analysis technologies have opened up new avenues to promote the efficiency of plant breeding. Novel genomics-based approaches for plant breeding and genetics research, such as genome-wide association studies (GWAS) and genomic selection (GS), are useful, especially in fruit tree breeding. The breeding of fruit trees is hindered by their long generation time, large plant size, long juvenile phase, and the necessity to wait for the physiological maturity of the plant to assess the marketable product (fruit). In this article, we describe the potential of genomics-assisted breeding, which uses these novel genomics-based approaches, to break through these barriers in conventional fruit tree breeding. We first introduce the molecular marker systems and whole-genome sequence data that are available for fruit tree breeding. Next we introduce the statistical methods for biparental linkage and quantitative trait locus (QTL) mapping as well as GWAS and GS. We then review QTL mapping, GWAS, and GS studies conducted on fruit trees. We also review novel technologies for rapid generation advancement. Finally, we note the future prospects of genomics-assisted fruit tree breeding and problems that need to be overcome in the breeding.

  7. Structure and genetic relationships between Brazilian naturalized and exotic purebred goat domestic goat (Capra hircus breeds based on microsatellites

    Directory of Open Access Journals (Sweden)

    Joelliton Domingos de Oliveira

    2007-03-01

    Full Text Available The genetic relationships and structure of fourteen goat (Capra hircus populations were estimated based on genotyping data from 14 goat populations (n = 410 goats at 13 microsatellite loci. We used analysis of molecular variance (AMOVA, principal component analysis (PCA and F statistics (F IS, F IT and F ST to evaluate the genetic diversity (Ho, He and ad of the goats. Genetic distances between the 14 goat populations were calculated from allelic frequency data for the 13 microsatellite markers. Moderate differentiation was observed for the populations of the undefined breeds (including the Anglo-Nubian-M breed, the naturalized Brazilian breeds (Moxotó, Canindé, the exotic purebred breeds (Alpine, Saanen, Toggenbourg and Anglo-Nubian and the naturalized Brazilian Graúna group. Our AMOVA showed that a major portion (88.51% of the total genetic variation resulted from differences between individual goats within populations, while between-populations variation accounted for the remaining 11.49% of genetic variation. We used a Reynolds genetic distance matrix and PCA to produce a phenogram based on the 14 goat populations and found three clusters, or groups, consisting of the goats belonging to the undefined breed, the naturalized breeds and the exotic purebred breeds. The closer proximity of the Canindé breed from the Brazilian state of Paraíba to the Graúna breed from the same state than to the genetically conserved Canindé breed from the Brazilian state of Ceará, as well as the heterozygosity values and significant deviations from Hardy-Weinberg equilibrium suggests that there was a high number of homozygotes in the populations studied, and indicates the importance of the State for the conservation of the local breeds. Cataloguing the genetic profile of Brazilian goat populations provides essential information for conservation and genetic improvements programs.

  8. Genetic diversity of eleven European pig breeds

    Directory of Open Access Journals (Sweden)

    Foulley Jean-Louis

    2000-03-01

    Full Text Available Abstract A set of eleven pig breeds originating from six European countries, and including a small sample of wild pigs, was chosen for this study of genetic diversity. Diversity was evaluated on the basis of 18 microsatellite markers typed over a total of 483 DNA samples collected. Average breed heterozygosity varied from 0.35 to 0.60. Genotypic frequencies generally agreed with Hardy-Weinberg expectations, apart from the German Landrace and Schwäbisch-Hällisches breeds, which showed significantly reduced heterozygosity. Breed differentiation was significant as shown by the high among-breed fixation index (overall FST = 0.27, and confirmed by the clustering based on the genetic distances between individuals, which grouped essentially all individuals in 11 clusters corresponding to the 11 breeds. The genetic distances between breeds were first used to construct phylogenetic trees. The trees indicated that a genetic drift model might explain the divergence of the two German breeds, but no reliable phylogeny could be inferred among the remaining breeds. The same distances were also used to measure the global diversity of the set of breeds considered, and to evaluate the marginal loss of diversity attached to each breed. In that respect, the French Basque breed appeared to be the most "unique" in the set considered. This study, which remains to be extended to a larger set of European breeds, indicates that using genetic distances between breeds of farm animals in a classical taxonomic approach may not give clear resolution, but points to their usefulness in a prospective evaluation of diversity.

  9. Selection of parent trees for Rubber (Hevea brasiliensis) breeding based on RAPD analysis

    OpenAIRE

    KUSWANHADI; MUDJI LASMININGSIH; FETRINA OKTAVIA

    2011-01-01

    Oktavia F, Lasminingsih M, Kuswanhadi. 2011. Selection of parent trees for Rubber (Hevea brasiliensis) breeding based on RAPD analysis. Nusantara Bioscience 3: 124-129. The parent trees’ clones usually originate from the previous generation having the potential of high production with better agronomical characters. Although, phenotype characters can determine the genetic variability among accessions, they are highly sensitive to environmental factors, so it is often difficult to identify the ...

  10. The Activity-Based Approach

    OpenAIRE

    McNally, Michael G.; Rindt, Craig

    2008-01-01

    What is the activity-based approach (ABA) and how does it differ from the conventional trip-based model of travel behavior? From where has the activity approach evolved, what is its current status, and what are its potential applications in transportation forecasting and policy analysis. What have been the contributions of activity-based approaches to understanding travel behavior? The conventional trip-based model of travel demand forecasting (see Chapters 2 and 3) has always lacked...

  11. Assessing breeding potential of peregrine falcons based on chlorinated hydrocarbon concentrations in prey

    Energy Technology Data Exchange (ETDEWEB)

    Elliott, J.E. [Canadian Wildlife Service, Pacific Wildlife Research Centre, 5421 Robertson Rd., RR no. 1, Delta, British Columbia, V4K 3N2 (Canada)]. E-mail: john.elliott@ec.gc.ca; Miller, M.J. [Iolaire Ecological Consulting, 7899 Thrasher St., Mission, British Columbia, V2V 5H3 (Canada); Wilson, L.K. [Canadian Wildlife Service, Pacific Wildlife Research Centre, 5421 Robertson Rd., RR no. 1, Delta, British Columbia, V4K 3N2 (Canada)

    2005-03-01

    Peregrine falcons (Falco peregrinus) now breed successfully in most areas of North America from which they were previously extirpated. The loss during the mid-part of the last century of many of the world's peregrine populations was largely a consequence of impaired reproduction caused by the effects of DDE on eggshell quality and embryo hatchability. Population recovery has been attributed to re-introduction efforts, coupled with regulatory restrictions on the use of organochlorine pesticides. Peregrines have not returned to breed in some areas, such as the Okanagan Valley of British Columbia. That region has been extensively planted in fruit orchards which were treated annually with DDT during the early 1950s to the 1970s. Ongoing contamination of avian species, including potential peregrine prey, inhabiting orchards has been documented. In response to an initiative to release peregrines around the city of Kelowna in the Okanagan Valley, we collected potential peregrine prey species and analyzed whole bodies for chlorinated hydrocarbon residues. We used a simple bioaccumulation model to predict concentrations of DDE in peregrine eggs using concentrations in prey and estimates of dietary makeup as input. Peregrines would be expected to breed successfully only if they fed on a diet primarily of doves. Feeding on as little as 10% of other species such as starlings, robins, gulls and magpies would produce DDE concentrations in peregrine eggs greater than the threshold of 15 mg/kg. We also estimated the critical concentration of DDE in total prey to be about 0.5 mg/kg, one half of the previous most conservative criterion for peregrine prey. Concentrations of dieldrin and PCBs in peregrine prey are less than suggested critical levels. - Based on the level of DDE contamination of prey items, it seems unlikely that peregrine falcons could breed successfully throughout most of the Okanagan Valley of British Columbia.

  12. Recent approaches of fish breeding /Abordagens recentes do melhoramento genético de peixes

    Directory of Open Access Journals (Sweden)

    João Costa Filho

    2012-04-01

    Full Text Available ResumoThis review aims at addressing the main issues related to genetic improvement applied to fish species with zootechnical potential, such as selection, genetic parameters and use of biotechnology as well as address the importance of this area of study for the expansion of aquaculture and its development trend. Fish breeding is one of the most important areas of study for fish production development. Important techniques are applied in order to advance genetic progress in fish breeding (e.g., individual selection, genetic parameters estimation and the use of biotechnology. Traditional breeding in fish farming has been conducted mainly through biometric analysis, which helps in choosing selection criteria and in the assessment of genetic parameters such as heritability and correlations between interesting traits. The use of biotechnology in fish breeding has been successful; it is an important strategy that allows breeding results to be achieved faster, although at a greater cost than traditional breeding. Fish breeding in Brazil is currently in its initial stages; however, it is a field with great growth expectations, and there is still significant research to be conducted in this area.AbstractEsta revisão tem como objetivo a abordagem dos principais aspectos relacionados ao melhoramento genético aplicado em espécies de peixes com potencial zootécnico, tais como seleção, parâmetros genéticos e utilização da biotecnologia, bem como abordar a importância desta área de estudos para a ampliação da aquicultura e sua tendência de desenvolvimento. O melhoramento genético é uma das áreas prioritárias de estudo para o desenvolvimento da produção de peixes. Assim, importantes técnicas são aplicadas visando à obtenção de progresso genético no melhoramento de peixes, como por exemplo, a seleção individual, a estimativa de parâmetros genéticos e o uso da biotecnologia. O melhoramento genético tradicional na piscicultura tem

  13. A Direct Comparison of Remote Sensing Approaches for High-Throughput Phenotyping in Plant Breeding

    Science.gov (United States)

    Tattaris, Maria; Reynolds, Matthew P.; Chapman, Scott C.

    2016-01-01

    Remote sensing (RS) of plant canopies permits non-intrusive, high-throughput monitoring of plant physiological characteristics. This study compared three RS approaches using a low flying UAV (unmanned aerial vehicle), with that of proximal sensing, and satellite-based imagery. Two physiological traits were considered, canopy temperature (CT) and a vegetation index (NDVI), to determine the most viable approaches for large scale crop genetic improvement. The UAV-based platform achieves plot-level resolution while measuring several hundred plots in one mission via high-resolution thermal and multispectral imagery measured at altitudes of 30–100 m. The satellite measures multispectral imagery from an altitude of 770 km. Information was compared with proximal measurements using IR thermometers and an NDVI sensor at a distance of 0.5–1 m above plots. For robust comparisons, CT and NDVI were assessed on panels of elite cultivars under irrigated and drought conditions, in different thermal regimes, and on un-adapted genetic resources under water deficit. Correlations between airborne data and yield/biomass at maturity were generally higher than equivalent proximal correlations. NDVI was derived from high-resolution satellite imagery for only larger sized plots (8.5 × 2.4 m) due to restricted pixel density. Results support use of UAV-based RS techniques for high-throughput phenotyping for both precision and efficiency. PMID:27536304

  14. A direct comparison of remote sensing approaches for high-throughput phenotyping in plant breeding

    Directory of Open Access Journals (Sweden)

    Maria Tattaris

    2016-08-01

    Full Text Available Remote sensing (RS of plant canopies permits non-intrusive, high-throughput monitoring of plant physiological characteristics. This study compared three RS approaches using a low flying UAV (unmanned aerial vehicle, with that of proximal sensing, and satellite-based imagery. Two physiological traits were considered, canopy temperature (CT and a vegetation index (NDVI, to determine the most viable approaches for large scale crop genetic improvement. The UAV-based platform achieves plot-level resolution while measuring several hundred plots in one mission via high-resolution thermal and multispectral imagery measured at altitudes of 30-100 m. The satellite measures multispectral imagery from an altitude of 770 km. Information was compared with proximal measurements using IR thermometers and an NDVI sensor at a distance of 0.5-1m above plots. For robust comparisons, CT and NDVI were assessed on panels of elite cultivars under irrigated and drought conditions, in different thermal regimes, and on un-adapted genetic resources under water deficit. Correlations between airborne data and yield/biomass at maturity were generally higher than equivalent proximal correlations. NDVI was derived from high-resolution satellite imagery for only larger sized plots (8.5 x 2.4 m due to restricted pixel density. Results support use of UAV-based RS techniques for high-throughput phenotyping for both precision and efficiency.

  15. A Practical Approach for Designing Breeding Groups to Maximize Genetic Diversity in a Large Colony of Captive Rhesus Macaques (Macaca mulatta).

    Science.gov (United States)

    Vinson, Amanda; Raboin, Michael J

    2015-11-01

    Limited guidance is available on practical approaches for maintaining genetic diversity in large NHP colonies that support biomedical research, despite the fact that reduced diversity in these colonies is likely to compromise the application of findings in NHP to human disease. In particular, constraints related to simultaneously housing, breeding, and providing ongoing veterinary care for thousands of animals with a highly complex social structure creates unique challenges for genetic management in these colonies. Because the composition of new breeding groups is a critical component of genetic management, here we outline a 3-stage protocol for forming new breeding groups of NHP that is aimed at maximizing genetic diversity in the face of frequent restrictions on age, sex, and numbers of animals per breeding group. As an example application of this protocol, we describe optimal combinations of rhesus macaques from an analysis of candidate animals available for breeding in July 2013, selected from among the approximately 4000 macaques maintained at the Oregon National Primate Research Center. In addition, a simulation study to explore the genetic diversity in breeding groups formed by using this protocol, indicated an approximate 10-fold higher genome uniqueness, 50% lower mean kinship, and an 84-fold lower mean inbreeding coefficient among potential offspring within groups, when compared with a suboptimal group design. We conclude that this protocol provides a practical and effective approach to breeding group design for colony managers who want to prevent the loss of genetic diversity in large, semiisolated NHP colonies.

  16. Mapping urban and peri-urban breeding habitats of Aedes mosquitoes using a fuzzy analytical hierarchical process based on climatic and physical parameters.

    Science.gov (United States)

    Sarfraz, Muhammad Shahzad; Tripathi, Nagesh K; Faruque, Fazlay S; Bajwa, Usama Ijaz; Kitamoto, Asanobu; Souris, Marc

    2014-01-01

    The spread of dengue fever depends mainly on the availability of favourable breeding sites for its mosquito vectors around human dwellings. To investigate if the various factors influencing breeding habitats can be mapped from space, dengue indices, such as the container index, the house index and the Breteau index, were calculated from Ministry of Public health data collected three times annually in Phitsanulok, Thailand between 2009 and 2011. The most influential factors were found to be temperature, humidity, rainfall, population density, elevation and land cover. Models were worked out using parameters mostly derived from freely available satellite images and fuzzy logic software with parameter synchronisation and a predication algorithm based on data mining and the Decision Tree method. The models developed were found to be sufficiently flexible to accommodate additional parameters and sampling data that might improve prediction of favourable breeding hotspots. The algorithm applied can not only be used for the prediction of near real-time scenarios with respect to dengue, but can also be applied for monitoring other diseases influenced by environmental and climatic factors. The multi-criteria model presented is a cost-effective way of identifying outbreak hotspots and early warning systems lend themselves for development based on this strategy. The proposed approach demonstrates the successful utilisation of remotely sensed images to map mosquito breeding habitats. PMID:25599639

  17. Mapping urban and peri-urban breeding habitats of Aedes mosquitoes using a fuzzy analytical hierarchical process based on climatic and physical parameters

    Directory of Open Access Journals (Sweden)

    Muhammad Shahzad Sarfraz

    2014-12-01

    Full Text Available The spread of dengue fever depends mainly on the availability of favourable breeding sites for its mosquito vectors around human dwellings. To investigate if the various factors influencing breeding habitats can be mapped from space, dengue indices, such as the container index, the house index and the Breteau index, were calculated from Ministry of Public health data collected three times annually in Phitsanulok, Thailand between 2009 and 2011. The most influential factors were found to be temperature, humidity, rainfall, population density, elevation and land cover. Models were worked out using parameters mostly derived from freely available satellite images and fuzzy logic software with parameter synchronisation and a predication algorithm based on data mining and the Decision Tree method. The models developed were found to be sufficiently flexible to accommodate additional parameters and sampling data that might improve prediction of favourable breeding hotspots. The algorithm applied can not only be used for the prediction of near real-time scenarios with respect to dengue, but can also be applied for monitoring other diseases influenced by environmental and climatic factors. The multi-criteria model presented is a cost-effective way of identifying outbreak hotspots and early warning systems lend themselves for development based on this strategy. The proposed approach demonstrates the successful utilisation of remotely sensed images to map mosquito breeding habitats.

  18. Prostaglandins and its analogues : An approach for treatment of anoestrus and to enhance breeding efficiency

    Directory of Open Access Journals (Sweden)

    G B Dudhatra

    2012-12-01

    Full Text Available Cloprostenol is a synthetic prostaglandin F analogue. It is a FP (Prostaglandin F receptor agonist, which shows 2á powerful luteolytic effects. It also stimulates the contraction of uterine and bronchial smooth muscle and produces vasoconstriction in some vessels. Anoestrous may be due to some conditions like abnormal pregnancy, early pregnancy, pyometra, endometritis, retention of placenta, maceration and mummification. So, get rid of this conditions cloprostenol is widely used. It has been now in vogue to administer PGF or its analogue in early 2á postpartum cows and buffaloes in order to hasten early resumption of cyclic ovarian activity and thereby to increase the reproductive efficiency. To improve reproductive efficiency, it is necessary to inseminate cows early in the breeding season so that, thereby achieving a more compact calving season. Breeding efficiency is increased by means of synchronization of estrus, conception rate and pregnancy rate. Estrus synchronization can be achieved by lysis of corpus luteum by administration of prostaglandin (PGF or its synthetic analogue on 5-17 2á days of the estrus cycle. The cows will return to estrus within 3-5 days. The effective therapeutic doses for cloprostenol are 500 μg in cattle and 175 μg in pigs. However, for R-cloprostenol, the recommended doses are: 150 μg in cattle and 75 μg in pigs. In both cases, it is administered by the intramuscular route. [Vet. World 2012; 5(6.000: 378-384

  19. Modern Breeding and Biotechnological Approaches to Enhance Carotenoid Accumulation in Seeds.

    Science.gov (United States)

    Federico, M L; Schmidt, M A

    2016-01-01

    There is an increasing demand for carotenoids, which are fundamental components of the human diet, for example as precursors of vitamin A. Carotenoids are also potent antioxidants and their health benefits are becoming increasingly evident. Protective effects against prostate cancer and age-related macular degeneration have been proposed for lycopene and lutein/zeaxanthin, respectively. Additionally, β-carotene, astaxanthin and canthaxanthin are high-value carotenoids used by the food industry as feed supplements and colorants. The production and consumption of these carotenoids from natural sources, especially from seeds, constitutes an important step towards fortifying the diet of malnourished people in developing nations. Therefore, attempts to metabolically manipulate β-carotene production in plants have received global attention, especially after the generation of Golden Rice (Oryza sativa). The endosperms of Golden Rice seeds synthesize and accumulate large quantities of β-carotene (provitamin A), yielding a characteristic yellow color in the polished grains. Classical breeding efforts have also focused in the development of cultivars with elevated seed carotenoid content, with maize and other cereals leading the way. In this communication we will summarize transgenic efforts and modern breeding strategies to fortify various crop seeds with nutraceutical carotenoids. PMID:27485229

  20. Variability of half-sib progeny properties as the base of Moesian beech (Fagus moesiaca (Maly) Czeczott) breeding

    OpenAIRE

    Ocokoljić Mirjana; Anastasijević Nebojša

    2004-01-01

    Based on the analysis of several morphological features and phenotype characteristics of seedlings in the juvenile test with 10 half-sib lines of Moesian beech (Fagus moesiaca (Maly) Czeczott), this paper gives the guidelines for further breeding and production of planting material for urban coenoses and the establishment of special purpose plantations of this species. The comparative analysis enabled the identification of the extreme planting material for further breeding programs aiming at ...

  1. Microsatellite based genetic diversity and relationships among ten Creole and commercial cattle breeds raised in Brazil

    OpenAIRE

    Almeida Leonardo D; Mariante Arthur S; Albuquerque Maria do Socorro M; Paiva Samuel R.; Egito Andréa A; Castro Silvia R; Grattapaglia Dario

    2007-01-01

    Abstract Background Brazil holds the largest commercial cattle populations worldwide. Local cattle breeds can be classified according to their origin, as exotic or Creole. Exotic breeds imported in the last 100 years, both zebuine and taurine, currently make up the bulk of the intensively managed populations. Locally adapted Creole breeds, originated from cattle introduced by the European conquerors derive from natural selection and events of breed admixture. While historical knowledge exists...

  2. 基于TM与ASAR遥感数据的扎龙丹顶鹤繁殖栖息地多尺度特征%Breeding habitat characteristics of red-crowned crane at Zhalong of Northeast China: A multi-scale approach based on TM and ASAR image data

    Institute of Scientific and Technical Information of China (English)

    刘春悦; 江红星; 张树清; 侯韵秋; 陆军

    2012-01-01

    Based on the Landsat TM and Envisat ASAR HH/HV imagery data and by using the GPS data of red-crowned crane nesting sites ( n = 28 ) at Zhalong National Nature Reserve of Northeast China, the models of the breeding habitat selection of red-crowned crane at the Reserve were established by binary Logistic regression to identify the key variables for the habitat selection at eight spatial scales (30-240 m). The relative performance of the two models based on the Landsat TM and Envisat ASAR HH/HV databases was compared, and the prediction capacity of the models across the eight scales was approached. The overall precisions of the two models were satisfactory ( ≥ 69. 0%). At scale 30 m, only variable TCA_2 entered with negative value into the model based on Landsat TM database, which indicated that the crane at this scale avoided selecting higher density reed marshes. At scales 60-120 m, the variable PCA_2 entered with positive value into the two models, indicating that the crane at these scales had higher demand of high density reed marshes to improve its concealment. At scale 90 m, the variable HV backward scatting coefficient also entered into the combined model, which indicated that water condition was the important factor for the habitat selection of the crane at this scale. At scales >120 m, the texture information of the two satellite sensors started to be involved into the two models, indicating that at larger scales, the crane had decreasing demand on the vegetation features for its breeding habitat selection but increasing sensitivity to the anthropogenic disturbance factors. The introduction of ASAR variables into the models increased the prediction accuracy of the models markedly at all scales.%选取扎龙保护区Landsat TM及Envisat ASAR双极化(HH/HV)两种遥感数据源,利用丹顶鹤巢址GPS位点数据(n=28),在8个尺度(30~240 m)下,采用二元Logistic回归建立丹顶鹤繁殖栖息地选择模型,从而确定不同尺度下栖息地选

  3. BreedVision--a multi-sensor platform for non-destructive field-based phenotyping in plant breeding.

    Science.gov (United States)

    Busemeyer, Lucas; Mentrup, Daniel; Möller, Kim; Wunder, Erik; Alheit, Katharina; Hahn, Volker; Maurer, Hans Peter; Reif, Jochen C; Würschum, Tobias; Müller, Joachim; Rahe, Florian; Ruckelshausen, Arno

    2013-01-01

    To achieve the food and energy security of an increasing World population likely to exceed nine billion by 2050 represents a major challenge for plant breeding. Our ability to measure traits under field conditions has improved little over the last decades and currently constitutes a major bottleneck in crop improvement. This work describes the development of a tractor-pulled multi-sensor phenotyping platform for small grain cereals with a focus on the technological development of the system. Various optical sensors like light curtain imaging, 3D Time-of-Flight cameras, laser distance sensors, hyperspectral imaging as well as color imaging are integrated into the system to collect spectral and morphological information of the plants. The study specifies: the mechanical design, the system architecture for data collection and data processing, the phenotyping procedure of the integrated system, results from field trials for data quality evaluation, as well as calibration results for plant height determination as a quantified example for a platform application. Repeated measurements were taken at three developmental stages of the plants in the years 2011 and 2012 employing triticale (×Triticosecale Wittmack L.) as a model species. The technical repeatability of measurement results was high for nearly all different types of sensors which confirmed the high suitability of the platform under field conditions. The developed platform constitutes a robust basis for the development and calibration of further sensor and multi-sensor fusion models to measure various agronomic traits like plant moisture content, lodging, tiller density or biomass yield, and thus, represents a major step towards widening the bottleneck of non-destructive phenotyping for crop improvement and plant genetic studies. PMID:23447014

  4. BreedVision — A Multi-Sensor Platform for Non-Destructive Field-Based Phenotyping in Plant Breeding

    Directory of Open Access Journals (Sweden)

    Arno Ruckelshausen

    2013-02-01

    Full Text Available To achieve the food and energy security of an increasing World population likely to exceed nine billion by 2050 represents a major challenge for plant breeding. Our ability to measure traits under field conditions has improved little over the last decades and currently constitutes a major bottleneck in crop improvement. This work describes the development of a tractor-pulled multi-sensor phenotyping platform for small grain cereals with a focus on the technological development of the system. Various optical sensors like light curtain imaging, 3D Time-of-Flight cameras, laser distance sensors, hyperspectral imaging as well as color imaging are integrated into the system to collect spectral and morphological information of the plants. The study specifies: the mechanical design, the system architecture for data collection and data processing, the phenotyping procedure of the integrated system, results from field trials for data quality evaluation, as well as calibration results for plant height determination as a quantified example for a platform application. Repeated measurements were taken at three developmental stages of the plants in the years 2011 and 2012 employing triticale (×Triticosecale Wittmack L. as a model species. The technical repeatability of measurement results was high for nearly all different types of sensors which confirmed the high suitability of the platform under field conditions. The developed platform constitutes a robust basis for the development and calibration of further sensor and multi-sensor fusion models to measure various agronomic traits like plant moisture content, lodging, tiller density or biomass yield, and thus, represents a major step towards widening the bottleneck of non-destructive phenotyping for crop improvement and plant genetic studies.

  5. Organic Plant Breeding: Achievements, Opportunities, and Challenges

    OpenAIRE

    Horneburg, Bernd

    2011-01-01

    The objective of this article is to highlight some successful approaches to organic plant breeding and to encourage the organic movement to engage in an increasing number of organic breeding and organic breeding research projects.

  6. Broiler breeding : breeding goals, selection schemes and the usefulness of local breeds for China

    NARCIS (Netherlands)

    Jiang, X.

    1999-01-01

    This dissertation considers three aspects of broiler breeding: definition of breeding goals, selection schemes for specialized lines, and the usefulness of local breeds for China. Economic values in broiler breeding were derived based on a deterministic model. A systematic design for the application

  7. Canine Mesenchymal Stem Cell Potential and the Importance of Dog Breed: Implication for Cell-Based Therapies.

    Science.gov (United States)

    Bertolo, Alessandro; Steffen, Frank; Malonzo-Marty, Cherry; Stoyanov, Jivko

    2015-01-01

    The study of canine bone marrow-derived mesenchymal stem cells (MSCs) has a prominent position in veterinary cell-based applications. Yet the plethora of breeds, their different life spans, and interbreed variations provide unclearness on what can be achieved specifically by such therapies. In this study, we compared a set of morphological, physiological, and genetic markers of MSCs derived from large dog breeds, namely, Border collie, German shepherd, Labrador, Malinois, Golden retriever, and Hovawart. We compared colony-forming units (CFUs) assay, population doubling time (PDT), senescence-associated β-galactosidase (SA-β-gal) activity, telomere length, and gene expression of MSCs, as well as the ability of cells to differentiate to osteogenic, adipogenic, and chondrogenic phenotypes. The influence of the culture media α-MEM, low-glucose DMEM, and high-glucose DMEM, used in cell isolation and expansion, was investigated in the presence and absence of basic fibroblast growth factor (bFGF). Initial cell yield was not affected by culturing medium, but MSCs expanded best in α-MEM supplemented with bFGF. After isolation, the number of MSCs was similar among breeds--as shown by equivalent CFUs--except in the Hovawart samples, which had fivefold less CFU. Telomere lengths were similar among breeds. MSCs divided actively only for 4 weeks in culture (PDT = ∼50 h/division), except Border collie cells divided for a longer time than cells from other groups. The percentage of senescent cells increased linearly in all breeds with time, with a faster rate in German shepherd, Labrador, and Golden retriever. Border collie cells underwent efficient osteogenic differentiation, Hovawart cells performed the best in chondrogenic differentiation, and Labrador cells in both, while German shepherd cells had the lower differentiation potential. MSCs from all breeds preserved the same adipogenic differentiation potential. In conclusion, despite variations, isolated MSCs can be

  8. Indigenous knowledge of animal breeding and breeds

    OpenAIRE

    I. Kohler-Rollefson

    2004-01-01

    Indigenous knowledge of animal breeding (IK-AB) includes concepts and practices used to influence the genetic composition of herds. Indigenous selection is often based on preferences based on physical characteristics, vigor, social and economic insurance. This issue paper summarizes the value of indigenous knowledge and local breeds to achieve agricultural sustainability. Links to IK-AB information are also provided. Available in SANREM office, ES

  9. Microsatellite based genetic structure of regional transboundary Istrian sheep breed populations in Croatia and Slovenia

    Directory of Open Access Journals (Sweden)

    Beatriz Gutierrez-Gil

    2015-02-01

    Full Text Available Istrian dairy sheep is a local breed essential for the identity and development of the Northern- Adriatic karstic region through high-quality products, primarily the hard sheep artisanal cheese. Border changes fragmented the initial Istrian dairy sheep population in three genetically isolated sub-populations in Italy (1000 animals, Slovenia (1150 animals and Croatia (2500 animals. Due to the drastic reduction of their population sizes and fragmentation, the populations in Croatia and Slovenia are included in governmentally supported conservation programs. The initial subpopulation in Italy was restored after near extinction with stock from Slovenia, and is used today in meat production. The aim of this study was to provide an initial understanding of the current genetic structure and distribution of the genetic variability that exists in Istrian sheep by analysing individuals sampled in two regional groups of Istrian sheep from Croatia and Slovenia. Cres island sheep and Lika pramenka sheep were used as out-groups for comparison. Genetic differentiation was analysed using factorial correspondence analysis and structure clustering over 26 microsatellite loci for a total of 104 sheep belonging to three breeds from Croatia and Slovenia. Factorial correspondence analysis and clustering-based structure analysis both showed three distinct populations: Lika pramenka sheep, Cres island sheep and Istrian sheep. We did not find a marked genetic divergence of the regional groups of Istrian sheep. Istrian sheep regional group from Slovenia showed lower genetic variability compared to the one from Croatia. Variability and structure information obtained in this study considered alongside with socio-cultural-contexts and economic goals for the Istrian sheep reared in Croatia and Slovenia indicate that the cross-border exchange of genetic material of animals carrying private alleles among populations would maintain these alleles at low frequencies and minimize

  10. A questionnaire-based study of gestation, parturition and neonatal mortality in pedigree breeding cats in the UK.

    Science.gov (United States)

    Sparkes, Andrew H; Rogers, Katherine; Henley, William E; Gunn-Moore, Danielle A; May, Julia M; Gruffydd-Jones, Timothy J; Bessant, Claire

    2006-06-01

    This study was based on a convenience-sampling questionnaire study of pedigree cat breeding in the UK. Data were collated for the births of 1,056 litters from 14 different pedigree breeds and 942 different households. Significant relationships between various outcomes and relevant predictors were assessed by multiple linear regression or logistic regression as appropriate. The overall mean gestation length of 65.1 days varied significantly between the breeds (Pkittens also varied significantly according to breed (Pkittens born alive (overall mean 93.5 g) increased with longer gestation lengths (P=0.0003), decreased with larger litter sizes (Pkittens were stillborn, which varied according to breed (P=0.0003), and the risk of a stillborn kitten increased with litter size (P=0.0001), and with the presence of congenital defects in the litter (P=0.0002). The mean kitten mortality between birth and 8 weeks of age was 9.1%, and the majority of these occurred in the first week of life. Parturition intervals varied widely. The duration of first stage of labour was less than 2h in 82.9% of cats. The interval between the birth of the first and last kitten was less than 6h in 85.7%, but more than 48 h in three cats. A maximum of 48 h was recorded between the births of individual kittens in unassisted deliveries. PMID:16442825

  11. Synchronization of ovulation in goats using prostaglandin F2α based protocols during the breeding season

    Institute of Scientific and Technical Information of China (English)

    João Simões

    2016-01-01

    The main aim of this review was to describe the feasibility of prostaglandin F2α (PGF2α)based protocols used as a tool for ovulation synchronization in cycling goats. There is a reproductive seasonality in small ruminants. However, from latitudes 45° towards equator, the intensity of anoestrus progressively decreases and tends to disappear in local breeds. Consequently, PGF2α or their synthetic analogues as luteolytic substances can assume a great importance in reproductive management of flocks from these regions. However, a single or double (9–11 days apart)PGF2α administration provokes a good induction but a moderate synchronization of ovulations if timed artificial insemination is considered, and a significant short oestrous cycle can occur with detrimental effects on fertility rate when compared with conventional progesterone-based protocols. In order to minimize this constraint, some gonadotropin-releasing hormone-PGF2α-gonadotropin-releasing hormone (Ovsynch)-based protocols and their modifications, manipulating the dominant follicles and corpora lutea, were successfully tested in goats. Similar to cows, thesePGF2α based protocols seem to be a promising and more cost-effective tool for reproductive management in cycling goats.

  12. Synchronization of ovulation in goats using prostaglandin F2α based protocols during the breeding season

    Directory of Open Access Journals (Sweden)

    João Simões

    2016-03-01

    Full Text Available The main aim of this review was to describe the feasibility of prostaglandin F2α (PGF2α based protocols used as a tool for ovulation synchronization in cycling goats. There is a reproductive seasonality in small ruminants. However, from latitudes 45 ° towards equator, the intensity of anoestrus progressively decreases and tends to disappear in local breeds. Consequently, PGF2α or their synthetic analogues as luteolytic substances can assume a great importance in reproductive management of flocks from these regions. However, a single or double (9–11 days apart PGF2α administration provokes a good induction but a moderate synchronization of ovulations if timed artificial insemination is considered, and a significant short oestrous cycle can occur with detrimental effects on fertility rate when compared with conventional progesterone-based protocols. In order to minimize this constraint, some gonadotropinreleasing hormone-PGF2α-gonadotropin-releasing hormone (Ovsynch-based protocols and their modifications, manipulating the dominant follicles and corpora lutea, were successfully tested in goats. Similar to cows, these PGF2α based protocols seem to be a promising and more cost-effective tool for reproductive management in cycling goats.

  13. Comparison of sire breed solutions for growth traits adjusted by mean expected progeny differences to a 1993 base.

    Science.gov (United States)

    Barkhouse, K L; Van Vleck, L D; Cundiff, L V; Buchanan, D S; Marshall, D M

    1998-09-01

    Records on growth traits were obtained from five Midwestern agricultural experiment stations as part of a beef cattle crossbreeding project (NC-196). Records on birth weight (BWT, n =3,490), weaning weight (WWT, n = 3,237), and yearling weight (YWT, n = 1,372) were analyzed within locations and pooled across locations to obtain estimates of breed of sire differences. Solutions for breed of sire differences were adjusted to the common base year of 1993. Then, factors to use with within-breed expected progeny differences (EPD) to obtain across-breed EPD were calculated. These factors were compared with factors obtained from similar analyses of records from the U. S. Meat Animal Research Center (MARC). Progeny of Brahman sires mated to Bos taurus cows were heaviest at birth and among the lightest at weaning. Simmental and Gelbvieh sires produced the heaviest progeny at weaning. Estimates of heritability pooled across locations were .34, .19, and .07 for BWT, WWT, and YWT, respectively. Regression coefficients of progeny performance on EPD of sire were 1.25+/-.09, .98+/-.13, and .62+/-.18 for BWT, WWT, and YWT, respectively. Rankings of breeds of sire generally did not change when adjusted for sire sampling. Rankings were generally similar to those previously reported for MARC data, except for Limousin and Charolais sires, which ranked lower for BWT and WWT at NC-196 locations than at MARC. Adjustment factors used to obtain across-breed EPD were largest for Brahman for BWT and for Gelbvieh for WWT. The data for YWT allow only comparison of Angus with Simmental and of Gelbvieh with Limousin. PMID:9781484

  14. Microsatellite based genetic diversity and population structure of the endangered Spanish Guadarrama goat breed

    OpenAIRE

    Jurado Juan J; González Carmen; Cuevas Javier; Marcos-Carcavilla Ane; Martínez Marta; Calvo Jorge H; Serrano Magdalena; de Tejada Paloma

    2009-01-01

    Abstract Background Assessing genetic biodiversity and population structure of minor breeds through the information provided by neutral molecular markers, allows determination of their extinction risk and to design strategies for their management and conservation. Analysis of microsatellite loci is known to be highly informative in the reconstruction of the historical processes underlying the evolution and differentiation of animal populations. Guadarrama goat is a threatened Spanish breed wh...

  15. FARM BASED BREEDING OF DUAL PURPOSE POULTRY - Experiences from a biodynamic poultry farm in The Netherlands

    OpenAIRE

    Nauta, Wytze; Slingenbergh, Gerjan; Vredevoogd, Wim; Wagenaar, Jan-Paul; Bestman, Monique

    2011-01-01

    Since 2009 a small scale breeding and selection project started on a biodynamic farm in The Netherlands. The overall goal is to breed stronger hens that do well under organic conditions and show lower rates of mortality and at the same time have roosters that can be reared for meat production. In this paper results concerning egg and meat production are given, as well as thoughts about economic aspects.

  16. Effect of predictor traits on accuracy of genomic breeding values for feed intake based on a limited cow reference population.

    Science.gov (United States)

    Pszczola, M; Veerkamp, R F; de Haas, Y; Wall, E; Strabel, T; Calus, M P L

    2013-11-01

    The genomic breeding value accuracy of scarcely recorded traits is low because of the limited number of phenotypic observations. One solution to increase the breeding value accuracy is to use predictor traits. This study investigated the impact of recording additional phenotypic observations for predictor traits on reference and evaluated animals on the genomic breeding value accuracy for a scarcely recorded trait. The scarcely recorded trait was dry matter intake (DMI, n = 869) and the predictor traits were fat-protein-corrected milk (FPCM, n = 1520) and live weight (LW, n = 1309). All phenotyped animals were genotyped and originated from research farms in Ireland, the United Kingdom and the Netherlands. Multi-trait REML was used to simultaneously estimate variance components and breeding values for DMI using available predictors. In addition, analyses using only pedigree relationships were performed. Breeding value accuracy was assessed through cross-validation (CV) and prediction error variance (PEV). CV groups (n = 7) were defined by splitting animals across genetic lines and management groups within country. With no additional traits recorded for the evaluated animals, both CV- and PEV-based accuracies for DMI were substantially higher for genomic than for pedigree analyses (CV: max. 0.26 for pedigree and 0.33 for genomic analyses; PEV: max. 0.45 and 0.52, respectively). With additional traits available, the differences between pedigree and genomic accuracies diminished. With additional recording for FPCM, pedigree accuracies increased from 0.26 to 0.47 for CV and from 0.45 to 0.48 for PEV. Genomic accuracies increased from 0.33 to 0.50 for CV and from 0.52 to 0.53 for PEV. With additional recording for LW instead of FPCM, pedigree accuracies increased to 0.54 for CV and to 0.61 for PEV. Genomic accuracies increased to 0.57 for CV and to 0.60 for PEV. With both FPCM and LW available for evaluated animals, accuracy was highest (0.62 for CV and 0.61 for PEV in

  17. Microsatellite Markers based Genetic Diversity Analysis in Damani and Nachi Goat Breeds of Pakistan

    Directory of Open Access Journals (Sweden)

    Tanveer Hussain*1, Masroor Ellahi Babar2, Haleema Sadia1, Misbah Shaheen1, Asif Nadeem1, Akhtar Ali1, Abdul Wajid1 and Sajjad Ali Shah1

    2013-11-01

    Full Text Available The genetic variation in two indigenous Pakistani goat breeds (Damani and Nachi was studied with 9 microsatellite markers in order to determine the genetic diversity between them. A total number of 50 non relative individuals of Damani (25 and Nachi (25 were sampled to explore genetic polymorphisms and relationship between these two important goat breeds. Result revealed considerable level of genetic diversity in both breeds and a total number of 53 alleles were identified with mean of 3.2 in Damani and 4.6 in Nachi. The genetic diversity in both breeds ranged from 0.51(Nachi to 0.73 (Damani. High level of genetic differentiation (FST = 0.20 and low level of gene flow (Nm=0.95 found could be due to their divergent or expanded geographical locations. Heterozygote across two populations (FIT was found to be 0.15. The mean Polymorphic Information Content (PIC was 0.70 ranging from 0.54 (MAF33 to 0.83 (ILSTS011, revealed the high level of polymorphism for studied microsatellite markers set in this study. The measures of genetic variation revealed that there is good scope for effective improvement, conservation and designing national breeding policies for goat breeds in future.

  18. Microsatellite based genetic diversity and population structure of the endangered Spanish Guadarrama goat breed

    Science.gov (United States)

    Serrano, Magdalena; Calvo, Jorge H; Martínez, Marta; Marcos-Carcavilla, Ane; Cuevas, Javier; González, Carmen; Jurado, Juan J; de Tejada, Paloma Díez

    2009-01-01

    Background Assessing genetic biodiversity and population structure of minor breeds through the information provided by neutral molecular markers, allows determination of their extinction risk and to design strategies for their management and conservation. Analysis of microsatellite loci is known to be highly informative in the reconstruction of the historical processes underlying the evolution and differentiation of animal populations. Guadarrama goat is a threatened Spanish breed which actual census (2008) consists of 3057 females and 203 males distributed in 22 populations more or less isolated. The aim of this work is to study the genetic status of this breed through the analysis of molecular data from 10 microsatellites typed in historic and actual live animals. Results The mean expected heterozygosity across loci within populations ranged from 0.62 to 0.77. Genetic differentiation measures were moderate, with a mean FST of 0.074, GST of 0.081 and RST of 0.085. Percentages of variation among and within populations were 7.5 and 92.5, respectively. Bayesian clustering analyses pointed out a population subdivision in 16 clusters, however, no correlation between geographical distances and genetic differences was found. Management factors such as the limited exchange of animals between farmers (estimated gene flow Nm = 3.08) mostly due to sanitary and social constraints could be the major causes affecting Guadarrama goat population subdivision. Conclusion Genetic diversity measures revealed a good status of biodiversity in the Guadarrama goat breed. Since diseases are the first cause affecting the census in this breed, population subdivision would be an advantage for its conservation. However, to maintain private alleles present at low frequencies in such small populations minimizing the inbreeding rate, it would necessitate some mating designs of animals carrying such alleles among populations. The systematic use of molecular markers will facilitate the

  19. A pre-breeding screening program for transgenic boars based on fluorescence in situ hybridization assay.

    Science.gov (United States)

    Bou, Gerelchimeg; Sun, Mingju; Lv, Ming; Zhu, Jiang; Li, Hui; Wang, Juan; Li, Lu; Liu, Zhongfeng; Zheng, Zhong; He, Wenteng; Kong, Qingran; Liu, Zhonghua

    2014-08-01

    For efficient transgenic herd expansion, only the transgenic animals that possess the ability to transmit transgene into next generation are considered for breeding. However, for transgenic pig, practically lacking a pre-breeding screening program, time, labor and money is always wasted to maintain non-transgenic pigs, low or null transgenic transmission pigs and the related fruitless gestations. Developing a pre-breeding screening program would make the transgenic herd expansion more economical and efficient. In this technical report, we proposed a three-step pre-breeding screening program for transgenic boars simply through combining the fluorescence in situ hybridization (FISH) assay with the common pre-breeding screening workflow. In the first step of screening, combined with general transgenic phenotype analysis, FISH is used to identify transgenic boars. In the second step of screening, combined with conventional semen test, FISH is used to detect transgenic sperm, thus to identify the individuals producing high quality semen and transgenic sperm. In the third step of screening, FISH is used to assess the in vitro fertilization embryos, thus finally to identify the individuals with the ability to produce transgenic embryos. By this three-step screening, the non-transgenic boars and boars with no ability to produce transgenic sperm or transgenic embryos would be eliminated; therefore only those boars could produce transgenic offspring are maintained and used for breeding and herd expansion. It is the first time a systematic pre-breeding screening program is proposed for transgenic pigs. This program might also be applied in other transgenic large animals, and provide an economical and efficient strategy for herd expansion.

  20. Microsatellite based genetic diversity and population structure of the endangered Spanish Guadarrama goat breed

    Directory of Open Access Journals (Sweden)

    Jurado Juan J

    2009-09-01

    Full Text Available Abstract Background Assessing genetic biodiversity and population structure of minor breeds through the information provided by neutral molecular markers, allows determination of their extinction risk and to design strategies for their management and conservation. Analysis of microsatellite loci is known to be highly informative in the reconstruction of the historical processes underlying the evolution and differentiation of animal populations. Guadarrama goat is a threatened Spanish breed which actual census (2008 consists of 3057 females and 203 males distributed in 22 populations more or less isolated. The aim of this work is to study the genetic status of this breed through the analysis of molecular data from 10 microsatellites typed in historic and actual live animals. Results The mean expected heterozygosity across loci within populations ranged from 0.62 to 0.77. Genetic differentiation measures were moderate, with a mean FST of 0.074, GST of 0.081 and RST of 0.085. Percentages of variation among and within populations were 7.5 and 92.5, respectively. Bayesian clustering analyses pointed out a population subdivision in 16 clusters, however, no correlation between geographical distances and genetic differences was found. Management factors such as the limited exchange of animals between farmers (estimated gene flow Nm = 3.08 mostly due to sanitary and social constraints could be the major causes affecting Guadarrama goat population subdivision. Conclusion Genetic diversity measures revealed a good status of biodiversity in the Guadarrama goat breed. Since diseases are the first cause affecting the census in this breed, population subdivision would be an advantage for its conservation. However, to maintain private alleles present at low frequencies in such small populations minimizing the inbreeding rate, it would necessitate some mating designs of animals carrying such alleles among populations. The systematic use of molecular markers will

  1. Selection of parent trees for Rubber (Hevea brasiliensis breeding based on RAPD analysis

    Directory of Open Access Journals (Sweden)

    KUSWANHADI

    2011-11-01

    Full Text Available Oktavia F, Lasminingsih M, Kuswanhadi. 2011. Selection of parent trees for Rubber (Hevea brasiliensis breeding based on RAPD analysis. Nusantara Bioscience 3: 124-129. The parent trees’ clones usually originate from the previous generation having the potential of high production with better agronomical characters. Although, phenotype characters can determine the genetic variability among accessions, they are highly sensitive to environmental factors, so it is often difficult to identify the difference between closely related clones. The genetic variability or phylogenetic relationships among rubber clones can be analysis using RAPD method, and based on the result, the parent trees can be selected. This research was aimed to analyze the genetic distance among rubber clones using RAPD method. Analysis was conducted on 45 rubber clones with 12 random primers. Pair-wise comparisons of unique and shared polymorphic amplification products were used to generate similarity coefficients. These coefficients were employed to construct a dendogram by using an Unweighted Pair-Group Method with Arithmetical Averages (UPGMA. The amplification of genomic DNA from 45 clones yielded 2408 DNA fragments, ranging in size from 250 bp to 3000 bp. The range of genetic similarity matrix was very wide (59.18%-94.23%. It indicated that most of the clones have a low level of polymorphism. The lowest genetic similarity (59,18% was found between RRIC 110 and AVROS 352 clones, while the highest (94.23% was between IRR 41 and IRR 42 clones. Cluster analysis showed that 45 clones of rubber were divided into two groups, the biggest group consisted of 30 clones, while the other one consisted of 15 clones with a genetic similarity value of 0,73.

  2. Form-based Approaches vs. Task-Based Approaches

    Directory of Open Access Journals (Sweden)

    Zahra Talebi

    2015-07-01

    Full Text Available This study aimed at investigating whether task-based approaches bear any superiority to that of more traditional ones evident in presentation-practice- and production phase .to fulfill the purpose of the study, the participants within the age range of 11-19, took part in the study. Following a pretest, treatment, and a posttest, the obtained data was analyzed using analysis of covariance (ANCOVA to examine the effects of the variables. The results of the analysis showed that participants in the PPP group did significantly better in the grammar recognition of the posttest than that of the task group. However, their counterparts in the task group gained better scores in the writing section of the test .this research study provided evidence in support of task proponents' claim in the merit of task-based activity in raising learners' implicit knowledge claiming to play the primary role in spontaneous speech.Keywords: Task-based language teaching, PPP model, focus on form, focus on meaning

  3. Development and integration of an SSR-based molecular identity database into sugarcane breeding program

    Science.gov (United States)

    Sugarcane breeding is very difficult and it takes 12 to 14 years to develop a new cultivar for commercial production. This is because sugarcane varieties are highly polyploid, inter-specific hybrids with 100 to 130 chromosomes that may vary across geographical areas. Other obstacles/constraints incl...

  4. Haplogroup Classification of Korean Cattle Breeds Based on Sequence Variations of mtDNA Control Region.

    Science.gov (United States)

    Kim, Jae-Hwan; Lee, Seong-Su; Kim, Seung Chang; Choi, Seong-Bok; Kim, Su-Hyun; Lee, Chang Woo; Jung, Kyoung-Sub; Kim, Eun Sung; Choi, Young-Sun; Kim, Sung-Bok; Kim, Woo Hyun; Cho, Chang-Yeon

    2016-05-01

    Many studies have reported the frequency and distribution of haplogroups among various cattle breeds for verification of their origins and genetic diversity. In this study, 318 complete sequences of the mtDNA control region from four Korean cattle breeds were used for haplogroup classification. 71 polymorphic sites and 66 haplotypes were found in these sequences. Consistent with the genetic patterns in previous reports, four haplogroups (T1, T2, T3, and T4) were identified in Korean cattle breeds. In addition, T1a, T3a, and T3b sub-haplogroups were classified. In the phylogenetic tree, each haplogroup formed an independent cluster. The frequencies of T3, T4, T1 (containing T1a), and T2 were 66%, 16%, 10%, and 8%, respectively. Especially, the T1 haplogroup contained only one haplotype and a sample. All four haplogroups were found in Chikso, Jeju black and Hanwoo. However, only the T3 and T4 haplogroups appeared in Heugu, and most Chikso populations showed a partial of four haplogroups. These results will be useful for stable conservation and efficient management of Korean cattle breeds. PMID:26954229

  5. PRINCIPLES OF ANIMAL BREEDING

    Directory of Open Access Journals (Sweden)

    Sonja Jovanovac

    2014-06-01

    Full Text Available University textbook Principles of Animal Breeding is intended for students of agriculture and veterinary medicine. The material is the adapted curricula of undergraduate and graduate level studies in the framework of which the modules Principles of animal breeding as well as Basics of genetics and selection of animals attended are listened. The textbook contains 14 chapters and a glossary of terms. Its concept enables combining fundamental and modern knowledge in the breeding and selection of animals based on balanced and quality manner. The textbook material can be divided into several thematic sections. The first one relates to the classical notions of domestic animals breeding such as the history of breeding, domestication, breed, hereditary and non-hereditary variability and description of general and production traits. The second section focuses on the basic concepts in population and quantitative genetics, as well as biometrics. The third unit is dedicated to the principles of selection and domestic animals improving. The fourth unit relates to the current concepts and objectives of the molecular markers use in domestic animals selection and breeding. The above material has been submitted to the Croatian universities, but so far it has not been published as a textbook. The Ministry of Science, Education and Sports of Republic of Croatia approved financial support for the textbook publication.

  6. Harnessing Diversity in Wheat to Enhance Grain Yield, Climate Resilience, Disease and Insect Pest Resistance and Nutrition Through Conventional and Modern Breeding Approaches

    Science.gov (United States)

    Mondal, Suchismita; Rutkoski, Jessica E.; Velu, Govindan; Singh, Pawan K.; Crespo-Herrera, Leonardo A.; Guzmán, Carlos; Bhavani, Sridhar; Lan, Caixia; He, Xinyao; Singh, Ravi P.

    2016-01-01

    Current trends in population growth and consumption patterns continue to increase the demand for wheat, a key cereal for global food security. Further, multiple abiotic challenges due to climate change and evolving pathogen and pests pose a major concern for increasing wheat production globally. Triticeae species comprising of primary, secondary, and tertiary gene pools represent a rich source of genetic diversity in wheat. The conventional breeding strategies of direct hybridization, backcrossing and selection have successfully introgressed a number of desirable traits associated with grain yield, adaptation to abiotic stresses, disease resistance, and bio-fortification of wheat varieties. However, it is time consuming to incorporate genes conferring tolerance/resistance to multiple stresses in a single wheat variety by conventional approaches due to limitations in screening methods and the lower probabilities of combining desirable alleles. Efforts on developing innovative breeding strategies, novel tools and utilizing genetic diversity for new genes/alleles are essential to improve productivity, reduce vulnerability to diseases and pests and enhance nutritional quality. New technologies of high-throughput phenotyping, genome sequencing and genomic selection are promising approaches to maximize progeny screening and selection to accelerate the genetic gains in breeding more productive varieties. Use of cisgenic techniques to transfer beneficial alleles and their combinations within related species also offer great promise especially to achieve durable rust resistance. PMID:27458472

  7. Harnessing Diversity in Wheat to Enhance Grain Yield, Climate Resilience, Disease and Insect Pest Resistance and Nutrition Through Conventional and Modern Breeding Approaches.

    Science.gov (United States)

    Mondal, Suchismita; Rutkoski, Jessica E; Velu, Govindan; Singh, Pawan K; Crespo-Herrera, Leonardo A; Guzmán, Carlos; Bhavani, Sridhar; Lan, Caixia; He, Xinyao; Singh, Ravi P

    2016-01-01

    Current trends in population growth and consumption patterns continue to increase the demand for wheat, a key cereal for global food security. Further, multiple abiotic challenges due to climate change and evolving pathogen and pests pose a major concern for increasing wheat production globally. Triticeae species comprising of primary, secondary, and tertiary gene pools represent a rich source of genetic diversity in wheat. The conventional breeding strategies of direct hybridization, backcrossing and selection have successfully introgressed a number of desirable traits associated with grain yield, adaptation to abiotic stresses, disease resistance, and bio-fortification of wheat varieties. However, it is time consuming to incorporate genes conferring tolerance/resistance to multiple stresses in a single wheat variety by conventional approaches due to limitations in screening methods and the lower probabilities of combining desirable alleles. Efforts on developing innovative breeding strategies, novel tools and utilizing genetic diversity for new genes/alleles are essential to improve productivity, reduce vulnerability to diseases and pests and enhance nutritional quality. New technologies of high-throughput phenotyping, genome sequencing and genomic selection are promising approaches to maximize progeny screening and selection to accelerate the genetic gains in breeding more productive varieties. Use of cisgenic techniques to transfer beneficial alleles and their combinations within related species also offer great promise especially to achieve durable rust resistance. PMID:27458472

  8. Welfare in horse breeding

    OpenAIRE

    Campbell, M L H; Sandøe, Peter

    2015-01-01

    Welfare problems related to the way horses are bred, whether by coitus or by the application of artificial reproduction techniques (ARTs), have been given no discrete consideration within the academic literature. This paper reviews the existing knowledge base about welfare issues in horse breeding and identifies areas in which data is lacking. We suggest that all methods of horse breeding are associated with potential welfare problems, but also that the judicious use of ARTs can sometimes hel...

  9. Ontology Partitioning: Clustering Based Approach

    Directory of Open Access Journals (Sweden)

    Soraya Setti Ahmed

    2015-05-01

    Full Text Available The semantic web goal is to share and integrate data across different domains and organizations. The knowledge representations of semantic data are made possible by ontology. As the usage of semantic web increases, construction of the semantic web ontologies is also increased. Moreover, due to the monolithic nature of the ontology various semantic web operations like query answering, data sharing, data matching, data reuse and data integration become more complicated as the size of ontology increases. Partitioning the ontology is the key solution to handle this scalability issue. In this work, we propose a revision and an enhancement of K-means clustering algorithm based on a new semantic similarity measure for partitioning given ontology into high quality modules. The results show that our approach produces meaningful clusters than the traditional algorithm of K-means.

  10. Haplotype Based Genome-Enabled Prediction of Traits Across Nordic Red Cattle Breeds

    OpenAIRE

    Castro Dias Cuyabano, Beatriz; Lund, Mogens Sandø; Rosa, G. J. M.; Gianola, Daniel; Su, Guosheng

    2014-01-01

    SNP markers have been widely explored in genome based prediction. This study explored the use of haplotype blocks (haploblocks) to predict five milk production traits (fertility, mastitis, protein, fat and milk yield), using a mix of Nordic Red cattle as reference population for training. Predictions were performed under a Bayesian approach comparing a GBLUP and a mixture model. In general, predictions were more reliable when using haploblocks instead of individual SNPs as predictors. The Dan...

  11. Analysis of genetic relationship among Indonesian native chicken breeds based on 335 D-loop sequences

    Directory of Open Access Journals (Sweden)

    Sri Sulandari

    2008-12-01

    Full Text Available he Mitochondrial DNA (mtDNA D-loop segment was PCR amplified and subsequently sequenced for a total of 335 individuals from Indonesian native chicken. The individuals were drawn from sixteen populations of native chicken and three individuals of green jungle fowls (Gallus varius. Indonesian native chicken populations were: Pelung Sembawa, PL (n = 18, Pelung Cianjur, PLC (n = 29 and Arab Silver, ARS (n=30, Cemani, CM (n = 32, Gaok, GA (n = 7, Kedu Hitam, KDH (n = 11, Wareng, T & TW (n = 10, Cemani, CMP (n = 2, Kedu, KD (n=26, Kedu Putih, KDP (n = 15, Sentul Jatiwangi, STJ (n = 27, Ayam Kate, KT (n = 29, Ayam Sentul, STC (n = 15, Arab Golden, ARG (n = 26, Ayam Merawang, MR (n = 28, Kedu Putih Jatiwangi, KDPJ (n=6 and Kapas, KPS (n = 21. Green jungle fowls were: two individuals from Flores island (FL5 and FL57 and one individual (BD42 from Sumbawa island. The sequences of the first 530 nucleotides were used for analysis. Eighty two haplotypes were identified from 78 polymorphic sites for the 335 individuals. Seventy nine haplotypes were identified in native chicken from 57 polymorphic sites while three were of jungle fowls. Phylogenetic analysis indicates that Indonesian native chicken can be grouped into five clades (Clade I, II, IIIc, IIId and IV of the previously identified seven clades (Clade I, II, IIIa, IIIb, IIIc, IIId and IV in Asian domestic chicken. Haplotypes CM10 and CM32 fall to a different category while STC12 is also on its own. Interestingly STC12 clusters together with Gallus gallus gallus (GenBank accession No. SULANDARI et al. Analysis of genetic relationship among Indonesian native chicken breeds based on 335 D-loop sequences 296 AB007720. When CM10 (same as CM14, CM32 and STC12 were removed, 77 haplotypes of domestic chicken were identified from 53 polymorphic sites. All the green jungle fowls are clustered to one clade of their own. The clades of domestic chicken are: Clade I which has three haplotypes, Clade II has 52

  12. Blood metabolites and hormone-based programmed breeding treatments in anovular lactating dairy cows.

    Science.gov (United States)

    El-Zarkouny, S Z; Shaaban, M M; Stevenson, J S

    2011-12-01

    The objectives were to (1) compare blood metabolites and reproductive outcomes in lactating dairy cows not inseminated before (early) and after (late) 100 d in milk (DIM) because of prolonged anovulation or anestrus; and (2) evaluate reproductive responses of cows ≤100 DIM to GnRH+PGF(2α) treatments after a fixed-time artificial insemination (AI; Ovsynch) or after induced estrus (Select Synch). In blood samples collected before initiating hormone-based breeding programs, anovular cows ≤ 100 DIM had the greatest serum total protein and globulin concentrations and the lowest tri-iodothyronine concentrations. Anovular and ovular cows >100 DIM had the greatest serum urea concentrations. Ovaries in cows (n=40) >100 DIM were examined by transrectal ultrasonography, and those without a detectable corpus luteum (CL; anovular) were given GnRH and then PGF(2α) 7 d later (Select Synch), whereas cows with a CL (ovular) were given 2 PGF(2α) injections 12 d apart. Cows were inseminated at observed estrus after the second or only PGF(2α) injection. More ovular (79%; 15/19) than anovular cows (24%; 5/21) were detected in estrus. No differences were detected between ovular and anovular cows in DIM at first AI, conception rate to first AI, cumulative pregnancy rates, number of services per conception, or days open. Cows (n=93) ≤100 DIM were assigned randomly to 3 treatments: (1) control (n=20) AI at estrus; (2) GnRH and then PGF(2α) on 7d (Select Synch; n=42) and monitored for signs of estrus for 5d and AI accordingly; or (3) 2 GnRH injections 9 d apart with PGF(2α) given 48 h before second GnRH injection and AI at 16h after the second GnRH injection (Ovsynch; n=31). Among cows ≤100 DIM, controls had more days to first service (149±16 d) than Select Synch cows (117±7 d). Ovsynch cows had the fewest days to first service (84±10 d) compared with control (149±16 d) and Select Synch (117±7 d) cows. Conception rates in control (25%) and Select Synch (26.2%) cows did

  13. Mutation breeding newsletter. No. 43

    International Nuclear Information System (INIS)

    This issue of the Newsletter includes articles dealing with radiation induced mutation based plant breeding research findings aimed at improving productivity, disease resistance and tolerance of stress conditions

  14. Optimizing the creation of base populations for aquaculture breeding programs using phenotypic and genomic data and its consequences on genetic progress

    OpenAIRE

    Fernández, Jesús; Toro, Miguel Á.; Sonesson, Anna K.; Villanueva, Beatriz

    2014-01-01

    The success of an aquaculture breeding program critically depends on the way in which the base population of breeders is constructed since all the genetic variability for the traits included originally in the breeding goal as well as those to be included in the future is contained in the initial founders. Traditionally, base populations were created from a number of wild strains by sampling equal numbers from each strain. However, for some aquaculture species improved strains are already avai...

  15. Connectivity of wood thrush breeding, wintering, and migration sites based on range-wide tracking.

    Science.gov (United States)

    Stanley, Calandra Q; McKinnon, Emily A; Fraser, Kevin C; Macpherson, Maggie P; Casbourn, Garth; Friesen, Lyle; Marra, Peter P; Studds, Colin; Ryder, T Brandt; Diggs, Nora E; Stutchbury, Bridget J M

    2015-02-01

    Many migratory animals are experiencing rapid population declines, but migration data with the geographic scope and resolution to quantify the complex network of movements between breeding and nonbreeding regions are often lacking. Determining the most frequently used migration routes and nonbreeding regions for a species is critical for understanding population dynamics and making effective conservation decisions. We tracked the migration of individual Wood Thrushes (Hylocichla mustelina) (n = 102) from across their range with light-level geolocators and, for the first time, quantified migration routes and wintering regions for distinct breeding populations. We identified regional and species-level migratory connectivity networks for this declining songbird by combining our tracking results with range-wide breeding abundance estimates and forest cover data. More than 50% of the species occupied the eastern wintering range (Honduras to Costa Rica), a region that includes only one-third of all wintering habitat and that is undergoing intensive deforestation. We estimated that half of all Wood Thrushes in North America migrate south through Florida in fall, whereas in spring approximately 73% funnel northward through a narrow span along the central U.S. Gulf Coast (88-93°W). Identifying migratory networks is a critical step for conservation of songbirds and we demonstrated with Wood Thrushes how it can highlight conservation hotspots for regional populations and species as a whole.

  16. Materiality in a Practice-Based Approach

    Science.gov (United States)

    Svabo, Connie

    2009-01-01

    Purpose: The paper aims to provide an overview of the vocabulary for materiality which is used by practice-based approaches to organizational knowing. Design/methodology/approach: The overview is theoretically generated and is based on the anthology Knowing in Organizations: A Practice-based Approach edited by Nicolini, Gherardi and Yanow. The…

  17. Haplotype Based Genome-Enabled Prediction of Traits Across Nordic Red Cattle Breeds

    DEFF Research Database (Denmark)

    Castro Dias Cuyabano, Beatriz; Lund, Mogens Sandø; Rosa, G J M;

    SNP markers have been widely explored in genome based prediction. This study explored the use of haplotype blocks (haploblocks) to predict five milk production traits (fertility, mastitis, protein, fat and milk yield), using a mix of Nordic Red cattle as reference population for training.......1% higher reliability than with the individual SNP approach in mastitis. This work gives evidence that predictions using haploblocks along with a combined training population of dairy cattle, may improve prediction accuracy of important traits in the individual populations........ Predictions were performed under a Bayesian approach comparing a GBLUP and a mixture model. In general, predictions were more reliable when using haploblocks instead of individual SNPs as predictors. The Danish Red cattle presented the largest benefit in predictive ability from haploblocks, achieving 5...

  18. QTLs for Tolerance of Drought and Breeding for Tolerance of Abiotic and Biotic Stress: An Integrated Approach

    OpenAIRE

    Shalabh Dixit; B Emma Huang; Ma Teresa Sta Cruz; Maturan, Paul T; Jhon Christian E Ontoy; Arvind Kumar

    2014-01-01

    BACKGROUND: The coupling of biotic and abiotic stresses leads to high yield losses in rainfed rice (Oryza sativa L.) growing areas. While several studies target these stresses independently, breeding strategies to combat multiple stresses seldom exist. This study reports an integrated strategy that combines QTL mapping and phenotypic selection to develop rice lines with high grain yield (GY) under drought stress and non-stress conditions, and tolerance of rice blast. METHODOLOGY: A blast-tole...

  19. AN APPROACH TO FARMING AND CATTLE BREEDING PRACTICES EMERGED IN THE TYNDALL COMMUNITY: AN OVERVIEW BACK TO THE PAST

    OpenAIRE

    Idris Omarovich Magomedov

    2015-01-01

    The paper written by the author considered the economic performance of one of the communities of Dagestan, – the Tindal people. The survey examined advancement of farming in the local community. In particular, harvesting practiced by the Tindin people, their instruments of labour, natural environment’ specifics, etc.One of the lines that the paper observed was advancement of cattle breeding by local peasants. The paper presented the huge bulk of field data and a significant selection of histo...

  20. Zoos through the lens of the IUCN Red List: a global metapopulation approach to support conservation breeding programs

    DEFF Research Database (Denmark)

    Conde, Dalia Amor; Colchero, Fernando; Pearce-Kelly, Paul;

    2013-01-01

    Given current extinction trends, the number of species requiring conservation breeding programs (CBPs) is likely to increase dramatically. To inform CBP policies for threatened terrestrial vertebrates, we evaluated the number and representation of threatened vertebrate species on the IUCN Red List...... and other institutions, alongside the development of international agreements that facilitate cross-border movement of zoo animals. To maximize the effectiveness of integrated conservation actions that include CBPs, it is fundamental that the non-zoo conservation community acknowledges and integrates...

  1. Elevating optimal human nutrition to a central goal of plant breeding and production of plant-based foods.

    Science.gov (United States)

    Sands, David C; Morris, Cindy E; Dratz, Edward A; Pilgeram, Alice

    2009-11-01

    High-yielding cereals and other staples have produced adequate calories to ward off starvation for much of the world over several decades. However, deficiencies in certain amino acids, minerals, vitamins and fatty acids in staple crops, and animal diets derived from them, have aggravated the problem of malnutrition and the increasing incidence of certain chronic diseases in nominally well-nourished people (the so-called diseases of civilization). Enhanced global nutrition has great potential to reduce acute and chronic disease, the need for health care, the cost of health care, and to increase educational attainment, economic productivity and the quality of life. However, nutrition is currently not an important driver of most plant breeding efforts, and there are only a few well-known efforts to breed crops that are adapted to the needs of optimal human nutrition. Technological tools are available to greatly enhance the nutritional value of our staple crops. However, enhanced nutrition in major crops might only be achieved if nutritional traits are introduced in tandem with important agronomic yield drivers, such as resistance to emerging pests or diseases, to drought and salinity, to herbicides, parasitic plants, frost or heat. In this way we might circumvent a natural tendency for high yield and low production cost to effectively select against the best human nutrition. Here we discuss the need and means for agriculture, food processing, food transport, sociology, nutrition and medicine to be integrated into new approaches to food production with optimal human nutrition as a principle goal.

  2. Simulated Breeding

    Science.gov (United States)

    Unemi, Tatsuo

    This chapter describes a basic framework of simulated breeding, a type of interactive evolutionary computing to breed artifacts, whose origin is Blind Watchmaker by Dawkins. These methods make it easy for humans to design a complex object adapted to his/her subjective criteria, just similarly to agricultural products we have been developing over thousands of years. Starting from randomly initialized genome, the solution candidates are improved through several generations with artificial selection. The graphical user interface helps the process of breeding with techniques of multifield user interface and partial breeding. The former improves the diversity of individuals that prevents being trapped at local optimum. The latter makes it possible for the user to fix features he/she already satisfied. These methods were examined through artistic applications by the author: SBART for graphics art and SBEAT for music. Combining with a direct genome editor and exportation to another graphical or musical tool on the computer, they can be powerful tools for artistic creation. These systems may contribute to the creation of a type of new culture.

  3. SOYBEAN - MOLECULAR ASPECTS OF BREEDING

    Directory of Open Access Journals (Sweden)

    Aleksandra Sudarić

    2012-12-01

    Full Text Available The book Soybean: Molecular Aspects of Breeding focuses recent progress in our understanding of the genetics and molecular biology of soybean. This book is divided into four parts and contains 22 chapters. Part I, Molecular Biology and Biotechnology focuses advances in molecular biology and laboratory procedures that have been developed recently to manipulate DNA. Part II, Breeding for abiotic stress covers proteomics approaches form as a powerful tool for investigating the molecular mechanisms of the plant responses to various types of abiotic stresses. Part III, Breeding for biotic stress addresses issues related to application of molecular based strategies in order to increase soybean resistance to various biotic factors. Part IV, Recent Technology reviews recent technologies into the realm of soybean monitoring, processing and product use. While the information accumulated in this book is of primary interest for plant breeders, valuable insights are also offered to agronomists, molecular biologists, physiologists, plant pathologists, food scientists and students. The book is a result of efforts made by many experts from different countries (USA, Japan, Croatia, Serbia, China, Canada, Malawi, Iran, Hong Kong, Brasil, Mexico.

  4. A property rights based consolidation approach

    OpenAIRE

    Casajus, André; Labrenz, Helfried

    2014-01-01

    We suggest a full consolidation approach that takes into account the property rights structure whithin the subsidiaries, in particular, the majority requirements on restructurings. Our approach employs a property rights index based on cooperative game theory.

  5. Contribution of Plant Breeding Efforts to the Safety of the Cereal-based Food Chain

    Institute of Scientific and Technical Information of China (English)

    Zoltán (B)edo; Mariann Rakszegi; László Láng; Peter Shewry

    2006-01-01

    @@ A comprehensive food safety strategy requires the establishment of a farm-to-fork traceability system, which allows each step in the food chain to be followed and identified. This policy requires a multidisciplinary scientific approach including the wide range of technological knowledge necessary to maintain the safety of the whole food chain. With the introduction of the sustainability concept considerable changes have taken place in food production.New priorities have been raised nowadays due to increasing concern for environmental protection and healthy food production. These new priorities, which have led to the agricultural sector developing a more multifunctional character,are based on new social demands in relation to food production, where the essential criteria are to provide nutritious foodstuffs free of dangerous substances and to use environment-friendly technologies which ensure sustainability.

  6. Molecular heterogeneity for bovine alpha-mannosidosis: PCR based assays for detection of breed-specific mutations.

    Science.gov (United States)

    Berg, T; Healy, P J; Tollersrud, O K; Nilssen, O

    1997-01-01

    DNA tests, based on the polymerase chain reaction (PCR), were developed for the detection of two breed-specific mutations responsible for the autosomal recessive disorder bovine alpha-mannosidosis. The tests involve separate amplification of two exons of the lysosomal alpha-mannosidase gene followed by restriction enzyme digestion of the amplicons. We demonstrate that one of the mutations, the 662G-->A transition, is responsible for alpha-mannosidosis in Galloway cattle. The other mutation, the 961T-->C transition, is uniquely associated with alpha-mannosidosis in Angus, Murray Grey and Brangus cattle from Australia. The 961T-->C mutation was also detected in Red Angus cattle exported from Canada to Australia as embryos. All 39 animals classified as heterozygotes on the basis of biochemical assays were heterozygous for one of the two mutations. None of 102 animals classified as homozygous-normal on the basis of biochemical assays possessed the mutations. Our results indicate that the two breed-specific mutations may have arisen in Scotland and by the export of animals and germplasm disseminated to America, New Zealand and Australia. PMID:9491457

  7. Breeding hop

    OpenAIRE

    Langrová, Kristýna

    2012-01-01

    Summary The subject of the provided extended essay is Hop Breeding. The work is aimed at the hops biology. Concretely it describes the biology and morfology of hop plant, underground and above-ground part of the plant, infructescence and inflorescence, the morphology and chemical composition of the head. Subsequently it defines qualitative characteristics of hops head, surcharges and substractions of damaged or destroyed hops. It describes a new system of hop certification and imp...

  8. Genetic architecture and bottleneck analyses of Salem Black goat breed based on microsatellite markers

    Directory of Open Access Journals (Sweden)

    A. K. Thiruvenkadan

    2014-09-01

    Full Text Available Aim: The present study was undertaken in Salem Black goat population for genetic analysis at molecular level to exploit the breed for planning sustainable improvement, conservation and utilization, which subsequently can improve the livelihood of its stakeholders. Materials and Methods: Genomic DNA was isolated from blood samples of 50 unrelated Salem Black goats with typical phenotypic features in several villages in the breeding tract and the genetic characterization and bottleneck analysis in Salem Black goat was done using 25 microsatellite markers as recommended by the Food and Agricultural Organization, Rome, Italy. The basic measures of genetic variation were computed using bioinformatic software. To evaluate the Salem Black goats for mutation drift equilibrium, three tests were performed under three different mutation models, viz., infinite allele model (IAM, stepwise mutation model (SMM and two-phase model (TPM and the observed gene diversity (He and expected equilibrium gene diversity (Heq were estimated under different models of microsatellite evolution. Results: The study revealed that the observed number of alleles ranged from 4 (ETH10, ILSTS008 to 17 (BM64444 with a total of 213 alleles and mean of 10.14±0.83 alleles across loci. The overall observed heterozygosity, expected heterozygosity, inbreeding estimate and polymorphism information content values were 0.631±0.041, 0.820±0.024, 0.233±0.044 and 0.786±0.023 respectively indicating high genetic diversity. The average observed gene diversities (He pooled over different markers was 0.829±0.024 and the average expected gene diversities under IAM, TPM and SMM models were 0.769±0.026, 0.808±0.024 and 0.837±0.020 respectively. The number of loci found to exhibit gene diversity excess under IAM, TPM and SMM models were 18, 17 and 12 respectively. Conclusion: All the three statistical tests, viz., sign test, standardized differences test and Wilcoxon sign rank test, revealed

  9. Welfare in horse breeding

    DEFF Research Database (Denmark)

    Campbell, M.L.H.; Sandøe, Peter

    2015-01-01

    Welfare problems related to the way horses are bred, whether by coitus or by the application of artificial reproduction techniques (ARTs), have been given no discrete consideration within the academic literature. This paper reviews the existing knowledge base about welfare issues in horse breeding...... and identifies areas in which data is lacking. We suggest that all methods of horse breeding are associated with potential welfare problems, but also that the judicious use of ARTs can sometimes help to address those problems. We discuss how negative welfare effects could be identified and limited and how...

  10. Rice Improvement Through Genome-Based Functional Analysis and Molecular Breeding in India.

    Science.gov (United States)

    Agarwal, Pinky; Parida, Swarup K; Raghuvanshi, Saurabh; Kapoor, Sanjay; Khurana, Paramjit; Khurana, Jitendra P; Tyagi, Akhilesh K

    2016-12-01

    Rice is one of the main pillars of food security in India. Its improvement for higher yield in sustainable agriculture system is also vital to provide energy and nutritional needs of growing world population, expected to reach more than 9 billion by 2050. The high quality genome sequence of rice has provided a rich resource to mine information about diversity of genes and alleles which can contribute to improvement of useful agronomic traits. Defining the function of each gene and regulatory element of rice remains a challenge for the rice community in the coming years. Subsequent to participation in IRGSP, India has continued to contribute in the areas of diversity analysis, transcriptomics, functional genomics, marker development, QTL mapping and molecular breeding, through national and multi-national research programs. These efforts have helped generate resources for rice improvement, some of which have already been deployed to mitigate loss due to environmental stress and pathogens. With renewed efforts, Indian researchers are making new strides, along with the international scientific community, in both basic research and realization of its translational impact. PMID:26743769

  11. Progress Towards Genetics and Breeding for Minor Genes Based Resistance to Ug99 and Other Rusts in CIMMYT High-Yielding Spring Wheat

    Institute of Scientific and Technical Information of China (English)

    Ravi Prakash Singh; Sybil Herrera-Foessel; Julio Huerta-Espino; Sukhwinder Singh; Sridhar Bhavani; Caixia Lan; and Bhoja Raj Basnet

    2014-01-01

    Wheat rusts continue to cause signiifcant losses worldwide despite major efforts given to their genetic control. This is due to frequent evolution and selection of virulence in pathogen overcoming the deployed race-speciifc resistance genes. Although the life of effective race-speciifc resistance genes can be prolonged by using gene combinations, an alternative approach being implemented at CIMMYT is to deploy varieties that posses adult plant resistance (APR) based on combinations of minor, slow rusting genes. When present alone, the APR genes do not confer adequate resistance especially under high disease pressure; however, combinations of 4 or 5 minor genes usually result in “near-immunity” or a high level of resistance. Although only a few APR genes are catalogued, various APR QTLs are now known and could lead to further characterization of additional genes. Four characterized genes have pleiotropic effects in conferring partial APR to all 3 rusts and powdery mildew, thus simplifying the task of breeding wheat varieties that are resistant to multiple diseases. Signiifcant progress was made recently in developing high-yielding wheat germplasm that possesses high levels of APR to all three rusts by implementing a Mexico-Kenya shuttle breeding scheme. Parents with APR to Ug99 were hybridized with high-yielding parents that had adequate to high levels of APR to leaf rust and yellow rust. Segregating populations and advanced lines from these crosses were selected under high rust pressures in Mexico (leaf rust and yellow rust) and Kenya (Ug99 stem rust and yellow rust) to identify high-yielding progenies that possess high to adequate APR to all three rusts. International distribution of these high-yielding wheats is underway through CIMMYT international yield trials and screening nurseries. It is expected that several wheat varieties with APR to three rusts will be released and grown in various countries in the near-future that will allow determining the

  12. Optimizing the creation of base populations for aquaculture breeding programs using phenotypic and genomic data and its consequences on genetic progress

    Directory of Open Access Journals (Sweden)

    Jesús eFernández

    2014-11-01

    Full Text Available The success of an aquaculture breeding program critically depends on the way in which the base population of breeders is constructed since all the genetic variability for the traits included originally in the breeding goal as well as those to be included in the future is contained in those initial founders. Traditionally base populations were created from a number of wild strains by sampling equal numbers from each strain. However, for some aquaculture species improved strains are already available and therefore, mean phenotypic values for economically important traits can be used as a criterion to optimize the sampling when creating base populations. Also, the increasing availability of genome-wide genotype information in aquaculture species could help to refine the estimation of relationships within and between candidate strains and, thus, to optimize the percentage of individuals to be sampled from each strain. This study explores the advantages of using phenotypic and genome-wide information when constructing base populations for aquaculture breeding programs in terms of initial and subsequent trait performance and genetic diversity level. Results show that a compromise solution between diversity and performance can be found when creating base populations. Up to 6% higher levels of phenotypic performance can be achieved at the same level of global diversity in the base population by optimizing the selection of breeders instead of sampling equal numbers from each strain. The higher performance observed in the base population persisted during ten generations of phenotypic selection applied in the subsequent breeding program.

  13. Optimizing the creation of base populations for aquaculture breeding programs using phenotypic and genomic data and its consequences on genetic progress.

    Science.gov (United States)

    Fernández, Jesús; Toro, Miguel Á; Sonesson, Anna K; Villanueva, Beatriz

    2014-01-01

    The success of an aquaculture breeding program critically depends on the way in which the base population of breeders is constructed since all the genetic variability for the traits included originally in the breeding goal as well as those to be included in the future is contained in the initial founders. Traditionally, base populations were created from a number of wild strains by sampling equal numbers from each strain. However, for some aquaculture species improved strains are already available and, therefore, mean phenotypic values for economically important traits can be used as a criterion to optimize the sampling when creating base populations. Also, the increasing availability of genome-wide genotype information in aquaculture species could help to refine the estimation of relationships within and between candidate strains and, thus, to optimize the percentage of individuals to be sampled from each strain. This study explores the advantages of using phenotypic and genome-wide information when constructing base populations for aquaculture breeding programs in terms of initial and subsequent trait performance and genetic diversity level. Results show that a compromise solution between diversity and performance can be found when creating base populations. Up to 6% higher levels of phenotypic performance can be achieved at the same level of global diversity in the base population by optimizing the selection of breeders instead of sampling equal numbers from each strain. The higher performance observed in the base population persisted during 10 generations of phenotypic selection applied in the subsequent breeding program.

  14. AN APPROACH TO FARMING AND CATTLE BREEDING PRACTICES EMERGED IN THE TYNDALL COMMUNITY: AN OVERVIEW BACK TO THE PAST

    Directory of Open Access Journals (Sweden)

    Idris Omarovich Magomedov

    2015-01-01

    Full Text Available The paper written by the author considered the economic performance of one of the communities of Dagestan, – the Tindal people. The survey examined advancement of farming in the local community. In particular, harvesting practiced by the Tindin people, their instruments of labour, natural environment’ specifics, etc.One of the lines that the paper observed was advancement of cattle breeding by local peasants. The paper presented the huge bulk of field data and a significant selection of historical sources.The author did due diligence to examination of the terrace-land cultivation by the Tindal people, which was the core occupation for all highlander inhabitants of Dagestan. The Tindal people grow mainly barley, wheat, rye, oat, millet, beans; since the XIX century the local inhabitants have introduced corn and potatoes.The Tindal people paid a specific attention to the gardening. Basically, the Tindal cultivated apples, apricots, pears, plums, nuts, etc., The gardening, although having not taken a key position in the economic life of the Tindal people, had been of enormous significance for the overall business operations of the highlanders.The Tindal people mostly used to cultivate land manually. They used the following instruments of labour: mattock, plough, wooden plough with an iron ploughshare (bezzi, entirely wooden plough (Rukia.

  15. Switching hemispheres: a new migration strategy for the disjunct Argentinean breeding population of Barn Swallow (Hirundo rustica.

    Directory of Open Access Journals (Sweden)

    Belen Garcia-Perez

    Full Text Available BACKGROUND: Barn Swallows (Hirundo rustica breed almost exclusively in the Northern Hemisphere. However, since the early 1980's, a small disjunct breeding population has become established in eastern Argentina, presumably by birds previously derived from those breeding in North America. Currently, it is unknown where these individuals go following breeding and how they have adjusted to a reversal in phenology. Their austral wintering period corresponds to the breeding period of the northern ancestral population and so they can potentially return to these more traditional breeding sites or they may occupy other South American wintering regions left vacant by conspecifics returning to the Northern Hemisphere. PRINCIPAL FINDINGS: We used a three-isotope (δ(13C, δ(15N, δ(2H approach to investigate potential wintering areas in Central and South America of individuals breeding in Argentina. Feather isotope values differed from those expected and measured at local breeding sites in Argentina indicating molt after the austral breeding period and away from the breeding grounds. Potential molting origins were identified applying likelihood-based assignment methods to a δ(2H isoscape for South America and dichotomous prior information on the distribution of C3 and C4 vegetation types based on modeled vegetation-δ(13C values. Barn Swallows now breeding in Argentina have changed their migratory behavior but presumably use the same cues as those used by the ancestral population, molting their feathers during the austral winter, likely in north-eastern South America.

  16. Diversity of pea (Pisum sativum) accessions based on morphological data for sustainable field pea breeding in Argentina.

    Science.gov (United States)

    Gatti, I; Espósito, M A; Almirón, P; Cravero, V P; Cointry, E L

    2011-10-31

    We characterized 13 accessions of dry peas of different origins from various growing regions in Argentina, based on three replications of 20 plants cultivated in 2009 and 2010 in a greenhouse, with the objective of selecting those with favorable characteristics for use in breeding programs. Significant differences were found for length and width of stipule and pod, length of the internodes and leaflets, plant height, total number of nodes, number of nodes at the first pod, number of days to flowering and to harvest, number of pods and seeds per pod, 100-seed weight and grain diameter, demonstrating a high degree of genetic variability. Phenotypic correlation analysis demonstrated that large pods produced more seeds per pod, but the seed weight decreased. Plants with smaller number of nodes in the first pod were more productive. Estimates of genotypic correlation coefficients indicated a strong inherent association among the different traits. Clustering methods grouped the accessions into five clusters. Cluster 5 included two accessions and showed the highest values for length and width of stipules (4.9 and 4.5 cm, respectively), length of leaflets (7.43 cm) and days to flowering (122.6), while cluster 3, with one accession, and cluster 4, with two accessions, showed the highest values for number of seeds per pod (3.78 and 4.39), number of pods per plant (5.33 and 5.70), length of pods (5.54 and 5.72 cm), and width of pods (1.21 and 1.20 cm, respectively). We conclude that accessions in clusters 3 and 4 would be useful for crosses with other cultivars in pea breeding programs.

  17. Selection criteria in organic cattle breeding

    OpenAIRE

    Savić Mila; Dimitrijević Vladimir; Trailović Ružica; Vegara Mensur; Dimitrijević Blagoje; Bečkei Žolt; Petrujkić Branislav; Cojkić Aleksandar

    2014-01-01

    The central issue in process of organizing organic cattle breeding is the knowledge about specificities of this kind of production, good knowledge of breed characteristics (body composition, immune tolerance, expressed predisposition towards some diseases, production properties). Research centres, in collaboration with producers, have defined the essential features on which the selection programmes in organic cattle breeding are based on. Of the greatest im...

  18. A recursive method for computing expected kinship and inbreeding in complex and dynamic breeding programmes.

    Science.gov (United States)

    Sitzenstock, F; Ytournel, F; Simianer, H

    2013-02-01

    In many livestock breeding programmes, the development of inbreeding is of critical importance. Thus, the assessment of the expected development of inbreeding should be an essential element in the design of breeding programmes. We propose a new method to deterministically predict the rate of inbreeding based on the gene-flow method in well-defined complex and dynamic breeding programmes. In the suggested approach, a breeding programme has to be structured in homogeneous age-sex-groups, so called cohorts, with a defined origin of genes. Starting from an initial setup (usually an unrelated and non-inbred base population), transition rules to calculate the kinship within and between cohorts originating from reproduction or ageing, respectively, are defined. Using this approach recursively provides the expected development of kinship within and between all cohorts over time, which can be combined into average kinships for the whole population or defined subsets. From these quantities, relevant parameters like the inbreeding rate or the effective population size are easily derived. We illustrate the method with a simple static example breeding programme in sheep. Based on this reference breeding programme, we demonstrate the use of our approach for dynamic breeding programmes, in which cohort sizes or vectors of gene origin change over time: here, we model the situation of exponential population growth and a bottleneck situation, respectively. The suggested approach does not account for the effect of selection on the development of inbreeding, but ideas to overcome this limitation are discussed.

  19. QTLs for tolerance of drought and breeding for tolerance of abiotic and biotic stress: an integrated approach.

    Directory of Open Access Journals (Sweden)

    Shalabh Dixit

    Full Text Available BACKGROUND: The coupling of biotic and abiotic stresses leads to high yield losses in rainfed rice (Oryza sativa L. growing areas. While several studies target these stresses independently, breeding strategies to combat multiple stresses seldom exist. This study reports an integrated strategy that combines QTL mapping and phenotypic selection to develop rice lines with high grain yield (GY under drought stress and non-stress conditions, and tolerance of rice blast. METHODOLOGY: A blast-tolerant BC2F3-derived population was developed from the cross of tropical japonica cultivar Moroberekan (blast- and drought-tolerant and high-yielding indica variety Swarna (blast- and drought-susceptible through phenotypic selection for blast tolerance at the BC2F2 generation. The population was studied for segregation distortion patterns and QTLs for GY under drought were identified along with study of epistatic interactions for the trait. RESULTS: Segregation distortion, in favour of Moroberekan, was observed at 50 of the 59 loci. Majority of these marker loci co-localized with known QTLs for blast tolerance or NBS-LRR disease resistance genes. Despite the presence of segregation distortion, high variation for DTF, PH and GY was observed and several QTLs were identified under drought stress and non-stress conditions for the three traits. Epistatic interactions were also detected for GY which explained a large proportion of phenotypic variance observed in the population. CONCLUSIONS: This strategy allowed us to identify QTLs for GY along with rapid development of high-yielding purelines tolerant to blast and drought with considerably reduced efforts. Apart from this, it also allowed us to study the effects of the selection cycle for blast tolerance. The developed lines were screened at IRRI and in the target environment, and drought and blast tolerant lines with high yield were identified. With tolerance to two major stresses and high yield potential, these

  20. A programmable approach to revising knowledge bases

    Institute of Scientific and Technical Information of China (English)

    LUAN Shangmin; DAI Guozhong; LI Wei

    2005-01-01

    This paper presents a programmable approach to revising knowledge bases consisting of clauses. Some theorems and lemmas are shown in order to give procedures for generating maximally consistent subsets. Then a complete procedure and an incomplete procedure for generating the maximal consistent subsets are presented, and the correctness of the procedures is also shown. Furthermore, a way to implement knowledge base revision is presented, and a prototype system is introduced. Compared with related works, the main characteristic of our approach is that the approach can be implemented by a computer program.

  1. [Transnasal endoscopic approaches to the cranial base].

    Science.gov (United States)

    Lysoń, Tomasz; Sieśkiewicz, Andrzej; Rutkowski, Robert; Kochanowicz, Jan; Turek, Grzegorz; Rogowski, Marek; Mariak, Zenon

    2013-01-01

    Recent advances in surgical endoscopy have made it possible to reach nearly the whole cranial base through a transnasal approach. These 'expanded approaches' lead to the frontal sinuses, the cribriform plate and planum sphenoidale, the suprasellar space, the clivus, odontoid and atlas. By pointing the endoscope laterally, the surgeon can explore structures in the coronal plane such as the cavernous sinuses, the pyramid and Meckel cave, the sphenopalatine and subtemporal fossae, and even the middle fossa and the orbit. The authors of this contribution use most of these approaches in their endoscopic skull base surgery. The purpose of this contribution is to review the hitherto established endoscopic approaches to the skull base and to illustrate them with photographs obtained during self-performed procedures and/or cadaver studies. PMID:23487296

  2. Mechatronic Design: A Port-Based Approach

    NARCIS (Netherlands)

    Amerongen, van Job

    2007-01-01

    In this paper we consider the integrated design of a mechatronic system. After considering the different design steps it is shown that a port-based approach during all phases of the design supports a true mechatronic design philosophy. Port-based design enables use of consistent models of the system

  3. Traditional and modern plant breeding methods with examples in rice (Oryza sativa L.).

    Science.gov (United States)

    Breseghello, Flavio; Coelho, Alexandre Siqueira Guedes

    2013-09-01

    Plant breeding can be broadly defined as alterations caused in plants as a result of their use by humans, ranging from unintentional changes resulting from the advent of agriculture to the application of molecular tools for precision breeding. The vast diversity of breeding methods can be simplified into three categories: (i) plant breeding based on observed variation by selection of plants based on natural variants appearing in nature or within traditional varieties; (ii) plant breeding based on controlled mating by selection of plants presenting recombination of desirable genes from different parents; and (iii) plant breeding based on monitored recombination by selection of specific genes or marker profiles, using molecular tools for tracking within-genome variation. The continuous application of traditional breeding methods in a given species could lead to the narrowing of the gene pool from which cultivars are drawn, rendering crops vulnerable to biotic and abiotic stresses and hampering future progress. Several methods have been devised for introducing exotic variation into elite germplasm without undesirable effects. Cases in rice are given to illustrate the potential and limitations of different breeding approaches.

  4. Cost-benefit Analysis of Scale Pig Breeding in Shandong Province Based on Modified Entropy Weight-TOPSIS Model

    Institute of Scientific and Technical Information of China (English)

    Yuanyuan; ZHANG; Shimin; SUN

    2014-01-01

    According to the relevant statistical data in National Agricultural cost-benefit Data Compilation(2001- 2013),we use the modified entropy weight- TOPSIS model to research the cost-benefit status of scale pig breeding in Shandong Province from the perspective of comparing it with that of the entire country and 9 other main pig producing areas. The results show that compared with the national average,the cost-benefit ratio of small scale pig breeding in Shandong Province is lower,while the cost-benefit ratio of medium scale and large scale pig breeding is significantly improved; the cost-benefit ratio of small scale pig breeding in Shandong Province is basically the same as that in 9 other main pig producing areas,while the cost-benefit ratio of medium scale and large scale pig breeding is higher; the output value of main products and the purchase price of piglet are two major bottlenecks restricting the cost-benefit improvement of scale pig breeding in Shandong Province.

  5. Core Collection Based Backcrossing: An Efficient Approach for Breeding,Germplasm Enhacement and Gene Discovery

    Institute of Scientific and Technical Information of China (English)

    J.Z. Jia; R.H. Zhou; X.Y. Zhang; L. Zhang; Y.L. Li; J. Wang; X.Z. Liu; L.F. Gao; S.B. Liu

    2007-01-01

    @@ Plant germplasm underpins much of crop development. Millions of germplasm accessions have been collected and conserved ex situ, and the major challenge is now how to exploit and utilize this abundant resource.

  6. A subgrid based approach for morphodynamic modelling

    Science.gov (United States)

    Volp, N. D.; van Prooijen, B. C.; Pietrzak, J. D.; Stelling, G. S.

    2016-07-01

    To improve the accuracy and the efficiency of morphodynamic simulations, we present a subgrid based approach for a morphodynamic model. This approach is well suited for areas characterized by sub-critical flow, like in estuaries, coastal areas and in low land rivers. This new method uses a different grid resolution to compute the hydrodynamics and the morphodynamics. The hydrodynamic computations are carried out with a subgrid based, two-dimensional, depth-averaged model. This model uses a coarse computational grid in combination with a subgrid. The subgrid contains high resolution bathymetry and roughness information to compute volumes, friction and advection. The morphodynamic computations are carried out entirely on a high resolution grid, the bed grid. It is key to find a link between the information defined on the different grids in order to guaranty the feedback between the hydrodynamics and the morphodynamics. This link is made by using a new physics-based interpolation method. The method interpolates water levels and velocities from the coarse grid to the high resolution bed grid. The morphodynamic solution improves significantly when using the subgrid based method compared to a full coarse grid approach. The Exner equation is discretised with an upwind method based on the direction of the bed celerity. This ensures a stable solution for the Exner equation. By means of three examples, it is shown that the subgrid based approach offers a significant improvement at a minimal computational cost.

  7. SELECTIVE BREEDING, HERITABLE CHARACTERISTICS AND GENETIC-BASED TECHNOLOGICAL CHANGE IN THE CANADIAN BEEF CATTLE INDUSTRY

    OpenAIRE

    Kerr, William A.

    1984-01-01

    The paper presents an examination of genetic-based technological change in the Canadian beef cattle industry. A model of technological change is explicitly developed in characteristics space. Production functions with genetic characteristics as arguments are estimated and two forms of technological change identified. Shadow values for characteristics are then calculated and actual genetic improvements are compared to the improvements suggested by the shadow prices. It is concluded that market...

  8. Canine Hip Dysplasia: Breed Effects

    OpenAIRE

    Martin, S W; Kirby, K.; Pennock, P W

    1980-01-01

    This paper is a refinement of previous studies in that only suitably radiographed dogs were included in the data base. The rate of hip dysplasia varied widely by breed from five percent in siberian huskies to eighty-three percent in english bulldogs. There was a significant difference in the prevalence of dysplasia within at least two breeds; golden retrievers and old english sheepdogs. Physical size per se did not appear to be an important determinant of hip dysplasia.

  9. Use of induced mutations in soybean breeding

    International Nuclear Information System (INIS)

    Artificial induction of mutation in plants is carried out using #betta#-irradiation and ethyl metanesulphonate (EMS) to expand the genetic variability of locally-grown soybean. This aspect of mutation breeding complements of conventional breeding approach undertaken by the Joint Malaysia Soybean Breeding Project group. Recovery of agronomically-important mutants such as earliness, lateness, bigger seed size and improved plant architecture were recorded. The significance of these findings is discussed. (author)

  10. A practice based approach to forest governance

    NARCIS (Netherlands)

    Arts, Bas; Behagel, Jelle; Turnhout, Esther; de Koning, Jessica; van Bommel, Séverine

    2014-01-01

    ‘Forest governance’ refers to new modes of regulation in the forest sector, such as decentralized, community-based and market-oriented policy instruments and management approaches. Its main theoretical basis consists of two mainstream models: rational choice and neo-institutionalism. Since these mod

  11. Immune based computer virus detection approaches

    Institute of Scientific and Technical Information of China (English)

    TAN Ying; ZHANG Pengtao

    2013-01-01

    The computer virus is considered one of the most horrifying threats to the security of computer systems worldwide.The rapid development of evasion techniques used in virus causes the signature based computer virus detection techniques to be ineffective.Many novel computer virus detection approaches have been proposed in the past to cope with the ineffectiveness,mainly classified into three categories:static,dynamic and heuristics techniques.As the natural similarities between the biological immune system (BIS),computer security system (CSS),and the artificial immune system (AIS) were all developed as a new prototype in the community of anti-virus research.The immune mechanisms in the BIS provide the opportunities to construct computer virus detection models that are robust and adaptive with the ability to detect unseen viruses.In this paper,a variety of classic computer virus detection approaches were introduced and reviewed based on the background knowledge of the computer virus history.Next,a variety of immune based computer virus detection approaches were also discussed in detail.Promising experimental results suggest that the immune based computer virus detection approaches were able to detect new variants and unseen viruses at lower false positive rates,which have paved a new way for the anti-virus research.

  12. Ecosystem based approaches to climate adaptation

    DEFF Research Database (Denmark)

    Zandersen, Marianne; Jensen, Anne; Termansen, Mette;

    This report analyses the prospects and barriers of applying ecosystem based approaches systematically to climate adaptation in urban areas, taking the case of green roofs in Copenhagen Municipality. It looks at planning aspects of green roofs in Copenhagen as well as citizen views and preferences...

  13. Strategy and Opportunity for The Development of Duck Breeding Farm

    Directory of Open Access Journals (Sweden)

    L Hardy Prasetyo

    2006-09-01

    Full Text Available The recent development of duck farming requires the availability of good quality breeding stocks commercially in order to improve productivity and efficiency . Presently, there is no commercial duck breeding farm which can produce good quality breeding stocks . This article presents information on alternatives in developing duck breeding farm, particularly for layer ducks . There are two alternative approaches in duck breeding farms : (1 Group breeding farm, which belongs to duck farmers' group, as part of a group production system, and (2 Commercial breeding farm, by an individual private company/Semi-Government Institution in a commercial scale and particularly for export market . A good breeding farm requires appropriate systems for selection and mating of the animals in order to guarantee the quality of the breeding stocks being produced . A breeding farm must be economically and technically feasible as an economic entity, so that economic analysis and marketing must be prepared seriously.

  14. Diversifying Selection Between Pure-Breed and Free-Breeding Dogs Inferred from Genome-Wide SNP Analysis.

    Science.gov (United States)

    Pilot, Małgorzata; Malewski, Tadeusz; Moura, Andre E; Grzybowski, Tomasz; Oleński, Kamil; Kamiński, Stanisław; Fadel, Fernanda Ruiz; Alagaili, Abdulaziz N; Mohammed, Osama B; Bogdanowicz, Wiesław

    2016-01-01

    Domesticated species are often composed of distinct populations differing in the character and strength of artificial and natural selection pressures, providing a valuable model to study adaptation. In contrast to pure-breed dogs that constitute artificially maintained inbred lines, free-ranging dogs are typically free-breeding, i.e., unrestrained in mate choice. Many traits in free-breeding dogs (FBDs) may be under similar natural and sexual selection conditions to wild canids, while relaxation of sexual selection is expected in pure-breed dogs. We used a Bayesian approach with strict false-positive control criteria to identify FST-outlier SNPs between FBDs and either European or East Asian breeds, based on 167,989 autosomal SNPs. By identifying outlier SNPs located within coding genes, we found four candidate genes under diversifying selection shared by these two comparisons. Three of them are associated with the Hedgehog (HH) signaling pathway regulating vertebrate morphogenesis. A comparison between FBDs and East Asian breeds also revealed diversifying selection on the BBS6 gene, which was earlier shown to cause snout shortening and dental crowding via disrupted HH signaling. Our results suggest that relaxation of natural and sexual selection in pure-breed dogs as opposed to FBDs could have led to mild changes in regulation of the HH signaling pathway. HH inhibits adhesion and the migration of neural crest cells from the neural tube, and minor deficits of these cells during embryonic development have been proposed as the underlying cause of "domestication syndrome." This suggests that the process of breed formation involved the same genetic and developmental pathways as the process of domestication. PMID:27233669

  15. A Pyramid Breeding of Eight Grain-yield Related Quantitative Trait Loci Based on Marker-assistant and Phenotype Selection in Rice (Oryza sativa L.)

    Institute of Scientific and Technical Information of China (English)

    Guo Zong; Ahong Wang; Lu Wang; Guohua Liang; Minghong Gu; Tao Sang; Bin Han

    2012-01-01

    1000-Grain weight and spikelet number per panicle are two important components for rice grain yield.In our previous study,eight quantitative trait loci (QTLs) conferring spikelet number per panicle and 1000-grain weight were mapped through sequencing-based genotyping of 150 rice recombinant inbred lines (RILs).In this study,we validated the effects of four QTLs from Nipponbare using chromosome segment substitution lines (CSSLs),and pyramided eight grain yield related QTLs.The new lines containing the eight QTLs with positive effects showed increased panicle and spikelet size as compared with the parent variety 93-11.We further proposed a novel pyramid breeding scheme based on marker-assistant and phenotype selection (MAPS).This scheme allowed pyramiding of as many as 24QTLs at a tingle hybridization without massive cross work.This study provided insights into the molecular basis of rice grain yield for direct wealth for high-yielding rice breeding.

  16. Advanced Approach of Multiagent Based Buoy Communication

    Directory of Open Access Journals (Sweden)

    Gediminas Gricius

    2015-01-01

    Full Text Available Usually, a hydrometeorological information system is faced with great data flows, but the data levels are often excessive, depending on the observed region of the water. The paper presents advanced buoy communication technologies based on multiagent interaction and data exchange between several monitoring system nodes. The proposed management of buoy communication is based on a clustering algorithm, which enables the performance of the hydrometeorological information system to be enhanced. The experiment is based on the design and analysis of the inexpensive but reliable Baltic Sea autonomous monitoring network (buoys, which would be able to continuously monitor and collect temperature, waviness, and other required data. The proposed approach of multiagent based buoy communication enables all the data from the costal-based station to be monitored with limited transition speed by setting different tasks for the agent-based buoy system according to the clustering information.

  17. Managing projects a team-based approach

    CERN Document Server

    Brown, Karen A

    2010-01-01

    Students today are likely to be assigned to project teams or to be project managers almost immediately in their first job. Managing Projects: A Team-Based Approach was written for a wide range of stakeholders, including project managers, project team members, support personnel, functional mangers who provide resources for projects, project customers (and customer representatives), project sponsors, project subcontractors, and anyone who plays a role in the project delivery process. The need for project management is on the rise as product life cycles compress, demand for IT systems increases, and business takes on an increasingly global character. This book adds to the project management knowledge base in a way that fills an unmet need—it shows how teams can apply many of the standard project management tools, as well as several tools that are relatively new to the field. Managing Projects: A Team-Based Approach offers the academic rigor found in most textbooks along with the practical attributes often foun...

  18. An Approach to Programming Based on Concepts

    CERN Document Server

    Savinov, Alexandr

    2007-01-01

    In this paper we describe a new approach to programming which generalizes object-oriented programming. It is based on using a new programming construct, called concept, which generalizes classes. Concept is defined as a pair of two classes: one reference class and one object class. Each concept has a parent concept which is specified using inclusion relation generalizing inheritance. We describe several important mechanisms such as reference resolution, context stack, dual methods and life-cycle management, inheritance and polymorphism. This approach to programming is positioned as a new programming paradigm and therefore we formulate its main principles and rules.

  19. Anopheline (Diptera:Culicidae) breeding in a traditional tank-based village ecosystem in north central Sri Lanka

    DEFF Research Database (Denmark)

    Amerasinghe, F P; Konradsen, F; Fonseka, K T;

    1997-01-01

    A 13-mo survey of immature anopheline mosquitoes breeding in surface water habitats was done at Mahameegaswewa village within the Huruluwewa watershed in north central Sri Lanka as part of a multidisciplinary study on malaria epidemiology. The watershed is representative of the ancient small tank...

  20. Trait-based approaches to zooplankton communities

    DEFF Research Database (Denmark)

    Lichtman, E.; Ohman, M.D.; Kiørboe, Thomas

    2013-01-01

    Zooplankton are major primary consumers and predators in most aquatic ecosystems. They exhibit tremendous diversity of traits, ecological strategies and, consequently, impacts on other trophic levels and the cycling of materials and energy. An adequate representation of this diversity in community...... and ecosystem models is necessary to generate realistic predictions on the functioning of aquatic ecosystems but remains extremely challenging. We propose that the use of trait-based approaches is a promising way to reduce complexity while retaining realism in developing novel descriptions of zooplankton...... traits, such as body size and motility, transcend several functions and are major determinants of zooplankton ecological strategies. Future developments of trait-based approaches to zooplankton should assemble a comprehensive matrix of key traits for diverse groups and explore it for general patterns...

  1. Materiality in a practice-based approach

    DEFF Research Database (Denmark)

    Svabo, Connie

    2009-01-01

    The paper provides an overview of the vocabulary for materiality which is used by practice-based approaches to organizational knowing. Common terms for materiality are 'artifact' and 'object'. The interaction between social and material realities is grasped as several processes: object......-oriented activity, symbolization, embodiment, performance, alignment and mediation. Material artifacts both stabilize and destabilize organizational action. They may ensure coordination, communication, and control, but they may also create disturbance and conflict....

  2. Evaluating face trustworthiness: a model based approach

    OpenAIRE

    Todorov, Alexander; Baron, Sean G.; Oosterhof, Nikolaas N.

    2008-01-01

    Judgments of trustworthiness from faces determine basic approach/avoidance responses and approximate the valence evaluation of faces that runs across multiple person judgments. Here, based on trustworthiness judgments and using a computer model for face representation, we built a model for representing face trustworthiness (study 1). Using this model, we generated novel faces with an increased range of trustworthiness and used these faces as stimuli in a functional Magnetic Resonance Imaging ...

  3. DRUG VEHICLE BASED APPROACHES OF PENETRATION ENHANCEMENT

    OpenAIRE

    Swaroop R Lahoti; MOHD. HASSAN G DEHGHAN; Dinesh L Dhamecha; AMIT A RATHI; MARIA SAIFEE

    2009-01-01

    Transdermal delivery of drugs through the skin to the systemic circulation provides a convenient route of administration for a variety of clinical indications. For transdermal delivery of drugs, stratum corneum is the main barrier layer for permeation of drug. So to circumvent the stratum corneum and to increase the flux through skin membrane, different approaches of penetration enhancement are used. Many reviews had described regarding the chemical penetration enhancement but vehicle based e...

  4. Tourism Planning: A Case Based Approach

    Directory of Open Access Journals (Sweden)

    Muhammad Khalid Khan

    2014-06-01

    Full Text Available This study is an attempt to investigate the tourism marketing and attraction strategies adopted by various countries. A case study based approach is adopted in this study. On the basis of investigation of tourism development strategies adopted by various countries, suggestions are also made at the end. These suggestions are aimed to increase visitors our tourists’ base in a country. These suggestions can be used by any country to increase visitors or tourists. Future directions are also given at the end.

  5. Matched filter based iterative adaptive approach

    Science.gov (United States)

    Nepal, Ramesh; Zhang, Yan Rockee; Li, Zhengzheng; Blake, William

    2016-05-01

    Matched Filter sidelobes from diversified LPI waveform design and sensor resolution are two important considerations in radars and active sensors in general. Matched Filter sidelobes can potentially mask weaker targets, and low sensor resolution not only causes a high margin of error but also limits sensing in target-rich environment/ sector. The improvement in those factors, in part, concern with the transmitted waveform and consequently pulse compression techniques. An adaptive pulse compression algorithm is hence desired that can mitigate the aforementioned limitations. A new Matched Filter based Iterative Adaptive Approach, MF-IAA, as an extension to traditional Iterative Adaptive Approach, IAA, has been developed. MF-IAA takes its input as the Matched Filter output. The motivation here is to facilitate implementation of Iterative Adaptive Approach without disrupting the processing chain of traditional Matched Filter. Similar to IAA, MF-IAA is a user parameter free, iterative, weighted least square based spectral identification algorithm. This work focuses on the implementation of MF-IAA. The feasibility of MF-IAA is studied using a realistic airborne radar simulator as well as actual measured airborne radar data. The performance of MF-IAA is measured with different test waveforms, and different Signal-to-Noise (SNR) levels. In addition, Range-Doppler super-resolution using MF-IAA is investigated. Sidelobe reduction as well as super-resolution enhancement is validated. The robustness of MF-IAA with respect to different LPI waveforms and SNR levels is also demonstrated.

  6. Cosine-Based Clustering Algorithm Approach

    Directory of Open Access Journals (Sweden)

    Mohammed A. H. Lubbad

    2012-02-01

    Full Text Available Due to many applications need the management of spatial data; clustering large spatial databases is an important problem which tries to find the densely populated regions in the feature space to be used in data mining, knowledge discovery, or efficient information retrieval. A good clustering approach should be efficient and detect clusters of arbitrary shapes. It must be insensitive to the outliers (noise and the order of input data. In this paper Cosine Cluster is proposed based on cosine transformation, which satisfies all the above requirements. Using multi-resolution property of cosine transforms, arbitrary shape clusters can be effectively identified at different degrees of accuracy. Cosine Cluster is also approved to be highly efficient in terms of time complexity. Experimental results on very large data sets are presented, which show the efficiency and effectiveness of the proposed approach compared to other recent clustering methods.

  7. A first genotyping assay of French cattle breeds based on a new allele of the extension gene encoding the melanocortin-1 receptor (Mc1r

    Directory of Open Access Journals (Sweden)

    Julien Raymond

    2000-09-01

    Full Text Available Abstract The seven transmembrane domain melanocortin-1 receptor (Mc1r encoded by the coat color extension gene (E plays a key role in the signaling pathway of melanin synthesis. Upon the binding of agonist (melanocortin hormone, α-MSH or antagonist (Agouti protein ligands, the melanosomal synthesis of eumelanin and/or phaeomelanin pigments is stimulated or inhibited, respectively. Different alleles of the extension gene were cloned from unrelated animals belonging to French cattle breeds and sequenced. The wild type E allele was mainly present in Normande cattle, the dominant ED allele in animals with black color (i.e. Holstein, whereas the recessive e allele was identified in homozygous animals exhibiting a more or less strong red coat color (Blonde d'Aquitaine, Charolaise, Limousine and Salers. A new allele, named E1, was found in either homozygous (E1/E1 or heterozygous (E1/E individuals in Aubrac and Gasconne breeds. This allele displayed a 4 amino acid duplication (12 nucleotides located within the third cytoplasmic loop of the receptor, a region known to interact with G proteins. A first genotyping assay of the main French cattle breeds is described based on these four extension alleles.

  8. Buffaloes breeding in Brasil

    OpenAIRE

    O. Bernardes

    2010-01-01

    Differently from what one could formerly imagine, that buffalo breeding activity would be solely directed to fill the so called cattle breeding gaps determined by inadequate environmental conditions for ordinary cattle breeding, it has been actually seen that in those areas where breeders could successfully organize industrial-agricultural chains, either on meat or milk and its related products production, there has been an expressive expansion .Buffalo breeding has shown to be an important a...

  9. Analysis of the Factors Influencing Breeding Record Establishment of Sheep-raising Households or Farms Based on Logit-ISM:Based on 849 Questionnaires from 17 Cities in Shandong Province

    Institute of Scientific and Technical Information of China (English)

    Shiping; ZHU; Shimin; SUN; Limin; HAN

    2015-01-01

    Breeding record is an important way to implement standardized sheep raising,trace major sheep raising epidemic information and ensure the quality and safety of products for sheep-raising households or farms.Based on 849 questionnaires from 17 cities of Shandong Province,the paper firstly used the binary discrete model of Logit to analyze the factors influencing the establishing behavior of breeding records of sheep-raising households or farms and then used the ISM model to explain the relationship and hierarchy of each influencing factor.The result showed that seven factors including the education level of the deciders,farming scale,fixed number of farming years,degree of specialization,support of the government,whether to join the industrialization organization and the recognition of the breeding records have a significant impact on the establishing behavior of breeding records of the sheep-raising households or farms.Among them,the support of the government and the recognition of breeding records are the surface direct factors,degree of specialization and whether to join the industrialization organization are the middle indirect factors,the education level of the deciders,the farming scale and the fixed number of farming years are deep source factors.

  10. Prospects for Hybrid Breeding in Bioenergy Grasses

    DEFF Research Database (Denmark)

    Aguirre, Andrea Arias; Studer, Bruno; Frei, Ursula;

    2012-01-01

    of different hybrid breeding schemes to optimally exploit heterosis for biomass yield in perennial ryegrass (Lolium perenne L.) and switchgrass (Panicum virgatum), two perennial model grass species for bioenergy production. Starting with a careful evaluation of current population and synthetic breeding methods......, we address crucial topics to implement hybrid breeding, such as the availability and development of heterotic groups, as well as biological mechanisms for hybridization control such as self-incompatibility (SI) and male sterility (MS). Finally, we present potential hybrid breeding schemes based on SI...

  11. Comparison between genomic predictions using daughter yield deviation and conventional estimated breeding value as response variables

    DEFF Research Database (Denmark)

    Guo, Gang; Lund, Mogens Sandø; Zhang, Y;

    2010-01-01

    This study compared genomic predictions using conventional estimated breeding values (EBV) and daughter yield deviations (DYD) as response variables based on simulated data. Eight scenarios were simulated in regard to heritability (0.05 and 0.30), number of daughters per sire (30, 100, and unequal......), the EBV and DYD approaches provided similar genomic estimated breeding value (GEBV) reliabilities, except for scenarios with unequal numbers of daughters and half of sires without genotype, for which the EBV approach was superior to the DYD approach (by 1.2 and 2.4%). Using a Bayesian mixture prior model...

  12. Creative teaching an evidence-based approach

    CERN Document Server

    Sale, Dennis

    2015-01-01

    This book contains an evidence-based pedagogic guide to enable any motivated teaching/training professional to be able to teach effectively and creatively. It firstly summarises the extensive research field on human psychological functioning relating to learning and how this can be fully utilised in the design and facilitation of quality learning experiences. It then demonstrates what creativity actually 'looks like' in terms of teaching practices, modelling the underpinning processes of creative learning design and how to apply these in lesson planning. The book, having established an evidence-based and pedagogically driven approach to creative learning design, extensively focuses on key challenges facing teaching professionals today. These include utilising information technologies in blended learning formats, differentiating instruction, and developing self-directed learners who can think well. The main purpose of the book is to demystify what it means to teach creatively, explicitly demonstrating the pr...

  13. Sheep resources of Ethiopia : genetic diversity and breeding strategy

    OpenAIRE

    Gebremichael, S.

    2008-01-01

    Twenty percent of the world domestic animal breeds are classified as being “at risk” of extinction. Seventy percent of the mammalian breeds, for which no risk status data are available, are found in the developing world. This is a serious constraint to effective prioritization and planning of sustainable breed conservation measures, including sustainable breeding strategies. The objectives of this thesis were to develop improved approaches to characterization of sheep resources, and sustainab...

  14. Evolution, plant breeding and biodiversity

    Directory of Open Access Journals (Sweden)

    Salvatore Ceccarelli

    2011-11-01

    Full Text Available This paper deals with changes in biodiversity during the course of evolution, plant domestication and plant breeding. It shows than man has had a strong influence on the progressive decrease of biodiversity, unconscious at first and deliberate in modern times. The decrease in biodiversity in the agricultures of the North causes a severe threat to food security and is in contrasts with the conservation of biodiversity which is part of the culture of several populations in the South. The concluding section of the paper shows that man could have guided evolution in a different way and shows an example of participatory plant breeding, a type of breeding which is done in collaboration with farmers and is based on selection for specific adaptation. Even though participatory plant breeding has been practiced for only about 20 years and by relatively few groups, the effects on both biodiversity and crop production are impressive. Eventually the paper shows how participatory plant breeding can be developed into ‘evolutionary plant breeding’ to cope in a dynamic way with climate changes.

  15. Peptide Based Radiopharmaceuticals: Specific Construct Approach

    Energy Technology Data Exchange (ETDEWEB)

    Som, P; Rhodes, B A; Sharma, S S

    1997-10-21

    The objective of this project was to develop receptor based peptides for diagnostic imaging and therapy. A series of peptides related to cell adhesion molecules (CAM) and immune regulation were designed for radiolabeling with 99mTc and evaluated in animal models as potential diagnostic imaging agents for various disease conditions such as thrombus (clot), acute kidney failure, and inflection/inflammation imaging. The peptides for this project were designed by the industrial partner, Palatin Technologies, (formerly Rhomed, Inc.) using various peptide design approaches including a newly developed rational computer assisted drug design (CADD) approach termed MIDAS (Metal ion Induced Distinctive Array of Structures). In this approach, the biological function domain and the 99mTc complexing domain are fused together so that structurally these domains are indistinguishable. This approach allows construction of conformationally rigid metallo-peptide molecules (similar to cyclic peptides) that are metabolically stable in-vivo. All the newly designed peptides were screened in various in vitro receptor binding and functional assays to identify a lead compound. The lead compounds were formulated in a one-step 99mTc labeling kit form which were studied by BNL for detailed in-vivo imaging using various animals models of human disease. Two main peptides usingMIDAS approach evolved and were investigated: RGD peptide for acute renal failure and an immunomodulatory peptide derived from tuftsin (RMT-1) for infection/inflammation imaging. Various RGD based metallopeptides were designed, synthesized and assayed for their efficacy in inhibiting ADP-induced human platelet aggregation. Most of these peptides displayed biological activity in the 1-100 µM range. Based on previous work by others, RGD-I and RGD-II were evaluated in animal models of acute renal failure. These earlier studies showed that after acute ischemic injury the renal cortex displays

  16. ECG biometric identification: A compression based approach.

    Science.gov (United States)

    Bras, Susana; Pinho, Armando J

    2015-08-01

    Using the electrocardiogram signal (ECG) to identify and/or authenticate persons are problems still lacking satisfactory solutions. Yet, ECG possesses characteristics that are unique or difficult to get from other signals used in biometrics: (1) it requires contact and liveliness for acquisition (2) it changes under stress, rendering it potentially useless if acquired under threatening. Our main objective is to present an innovative and robust solution to the above-mentioned problem. To successfully conduct this goal, we rely on information-theoretic data models for data compression and on similarity metrics related to the approximation of the Kolmogorov complexity. The proposed measure allows the comparison of two (or more) ECG segments, without having to follow traditional approaches that require heartbeat segmentation (described as highly influenced by external or internal interferences). As a first approach, the method was able to cluster the data in three groups: identical record, same participant, different participant, by the stratification of the proposed measure with values near 0 for the same participant and closer to 1 for different participants. A leave-one-out strategy was implemented in order to identify the participant in the database based on his/her ECG. A 1NN classifier was implemented, using as distance measure the method proposed in this work. The classifier was able to identify correctly almost all participants, with an accuracy of 99% in the database used. PMID:26737619

  17. Linear systems a measurement based approach

    CERN Document Server

    Bhattacharyya, S P; Mohsenizadeh, D N

    2014-01-01

    This brief presents recent results obtained on the analysis, synthesis and design of systems described by linear equations. It is well known that linear equations arise in most branches of science and engineering as well as social, biological and economic systems. The novelty of this approach is that no models of the system are assumed to be available, nor are they required. Instead, a few measurements made on the system can be processed strategically to directly extract design values that meet specifications without constructing a model of the system, implicitly or explicitly. These new concepts are illustrated by applying them to linear DC and AC circuits, mechanical, civil and hydraulic systems, signal flow block diagrams and control systems. These applications are preliminary and suggest many open problems. The results presented in this brief are the latest effort in this direction and the authors hope these will lead to attractive alternatives to model-based design of engineering and other systems.

  18. Nanotechnology-based approaches in anticancer research.

    Science.gov (United States)

    Jabir, Nasimudeen R; Tabrez, Shams; Ashraf, Ghulam Md; Shakil, Shazi; Damanhouri, Ghazi A; Kamal, Mohammad A

    2012-01-01

    Cancer is a highly complex disease to understand, because it entails multiple cellular physiological systems. The most common cancer treatments are restricted to chemotherapy, radiation and surgery. Moreover, the early recognition and treatment of cancer remains a technological bottleneck. There is an urgent need to develop new and innovative technologies that could help to delineate tumor margins, identify residual tumor cells and micrometastases, and determine whether a tumor has been completely removed or not. Nanotechnology has witnessed significant progress in the past few decades, and its effect is widespread nowadays in every field. Nanoparticles can be modified in numerous ways to prolong circulation, enhance drug localization, increase drug efficacy, and potentially decrease chances of multidrug resistance by the use of nanotechnology. Recently, research in the field of cancer nanotechnology has made remarkable advances. The present review summarizes the application of various nanotechnology-based approaches towards the diagnostics and therapeutics of cancer.

  19. Wavelet based approach for facial expression recognition

    Directory of Open Access Journals (Sweden)

    Zaenal Abidin

    2015-03-01

    Full Text Available Facial expression recognition is one of the most active fields of research. Many facial expression recognition methods have been developed and implemented. Neural networks (NNs have capability to undertake such pattern recognition tasks. The key factor of the use of NN is based on its characteristics. It is capable in conducting learning and generalizing, non-linear mapping, and parallel computation. Backpropagation neural networks (BPNNs are the approach methods that mostly used. In this study, BPNNs were used as classifier to categorize facial expression images into seven-class of expressions which are anger, disgust, fear, happiness, sadness, neutral and surprise. For the purpose of feature extraction tasks, three discrete wavelet transforms were used to decompose images, namely Haar wavelet, Daubechies (4 wavelet and Coiflet (1 wavelet. To analyze the proposed method, a facial expression recognition system was built. The proposed method was tested on static images from JAFFE database.

  20. TILLING in forage grasses for gene discovery and breeding improvement.

    Science.gov (United States)

    Manzanares, Chloe; Yates, Steven; Ruckle, Michael; Nay, Michelle; Studer, Bruno

    2016-09-25

    Mutation breeding has a long-standing history and in some major crop species, many of the most important cultivars have their origin in germplasm generated by mutation induction. For almost two decades, methods for TILLING (Targeting Induced Local Lesions IN Genomes) have been established in model plant species such as Arabidopsis (Arabidopsis thaliana L.), enabling the functional analysis of genes. Recent advances in mutation detection by second generation sequencing technology have brought its utility to major crop species. However, it has remained difficult to apply similar approaches in forage and turf grasses, mainly due to their outbreeding nature maintained by an efficient self-incompatibility system. Starting with a description of the extent to which traditional mutagenesis methods have contributed to crop yield increase in the past, this review focuses on technological approaches to implement TILLING-based strategies for the improvement of forage grass breeding through forward and reverse genetics. We present first results from TILLING in allogamous forage grasses for traits such as stress tolerance and evaluate prospects for rapid implementation of beneficial alleles to forage grass breeding. In conclusion, large-scale induced mutation resources, used for forward genetic screens, constitute a valuable tool to increase the genetic diversity for breeding and can be generated with relatively small investments in forage grasses. Furthermore, large libraries of sequenced mutations can be readily established, providing enhanced opportunities to discover mutations in genes controlling traits of agricultural importance and to study gene functions by reverse genetics. PMID:26924175

  1. Effects of within-patch heterogeneity on connectivity in pond-breeding amphibians studied by means of an individual-based model

    OpenAIRE

    Pontoppidan, M.-B.; Nachman, G

    2013-01-01

    The metapopulation framework presumes the habitat of a local population to be continuous and homogenous, and patch area is often used as a proxy for population size. Many populations of pond-breeding amphibians are assumed to follow metapopulation dynamics, and connectivity is mostly measured between breeding ponds. However, the habitat of pond-breeding amphibians is not only defined by the pond but, typically, consists of a breeding pond surrounded by clusters of disjoint s...

  2. Analysis of Plant Breeding on Hadoop and Spark

    Directory of Open Access Journals (Sweden)

    Shuangxi Chen

    2016-01-01

    Full Text Available Analysis of crop breeding technology is one of the important means of computer-assisted breeding techniques which have huge data, high dimensions, and a lot of unstructured data. We propose a crop breeding data analysis platform on Spark. The platform consists of Hadoop distributed file system (HDFS and cluster based on memory iterative components. With this cluster, we achieve crop breeding large data analysis tasks in parallel through API provided by Spark. By experiments and tests of Indica and Japonica rice traits, plant breeding analysis platform can significantly improve the breeding of big data analysis speed, reducing the workload of concurrent programming.

  3. Selection criteria in organic cattle breeding

    Directory of Open Access Journals (Sweden)

    Savić Mila

    2014-01-01

    Full Text Available The central issue in process of organizing organic cattle breeding is the knowledge about specificities of this kind of production, good knowledge of breed characteristics (body composition, immune tolerance, expressed predisposition towards some diseases, production properties. Research centres, in collaboration with producers, have defined the essential features on which the selection programmes in organic cattle breeding are based on. Of the greatest importance for veterinary service is the fact that selection programmes in organic cattle breeding are in the first place based on giving priority to healthy animals, with strong immune system, good reproductive characteristics, which can be in production system for a long period. Additional important selective criteria is specific body resistance and adaptability of autochtonous breeds to environmental conditions. [Projekat Ministarstva nauke Republike Srbije, br. TP 31085

  4. Estimation of successful breeding pairs for wolves in the Northern Rocky Mountains, USA

    Science.gov (United States)

    Mitchell, M.S.; Ausband, D.E.; Sime, C.A.; Bangs, E.E.; Gude, J.A.; Jimenez, M.D.; Mack, C.M.; Meier, T.J.; Nadeau, M.S.; Smith, D.W.

    2008-01-01

    Under the Endangered Species Act, documenting recovery and federally mandated population levels of wolves (Canis lupus) in the Northern Rocky Mountains (NRM) requires monitoring wolf packs that successfully recruit young. United States Fish and Wildlife Service regulations define successful breeding pairs as packs estimated to contain an adult male and female, accompanied by ???2 pups on 31 December of a given year. Monitoring successful breeding pairs will become more difficult following proposed delisting of NRM wolves; alternatives to historically intensive methods, appropriate to the different ecological and regulatory context following delisting, are required. Because pack size is easier to monitor than pack composition, we estimated probability a pack would contain a successful breeding pair based on its size for wolf populations inhabiting 6 areas in the NRM. We also evaluated the extent to which differences in demography of wolves and levels of human-caused mortality among the areas influenced the probability of packs of different sizes would contain successful breeding pairs. Probability curves differed among analysis areas, depending primarily on levels of human-caused mortality, secondarily on annual population growth rate, and little on annual population density. Probabilities that packs contained successful breeding pairs were more uniformly distributed across pack sizes in areas with low levels of human mortality and stable populations. Large packs in areas with high levels of human-caused mortality and high annual growth rates had relatively high probabilities of containing breeding pairs whereas those for small packs were relatively low. Our approach can be used by managers to estimate number of successful breeding pairs in a population where number of packs and their sizes are known. Following delisting of NRM wolves, human-caused mortality is likely to increase, resulting in more small packs with low probabilities of containing breeding pairs

  5. Prevalence of porcine endogenous retrovirus in Chinese pig breeds and in patients treated with a porcine liver cell-based bioreactor

    Institute of Scientific and Technical Information of China (English)

    Qing Liu; Zheng Liu; Evangelos Dalakas

    2005-01-01

    AIM: To determine the prevalence of porcine endogenous retrovirus (PERV) in various pig breeds raised in China including Chinese experimental mini-pigs by PERV-reverse transcriptase (PERV-RT enzyme). Moreover, the potential for infection of PERV was investigated in patients treated with a bioreactor based on porcine liver cells (n = 3).METHODS: Pig serum, liver and musde cell-free supematants were collected from various Chinese pig breeds. Porcine hepatocytes were isolated with a two-step perfusion method. Three patients with acute or chronic liver failure were treated with a bioartificial liver support system (BALSS) for 8-12 h and serum samples were collected from the patients before, immediately after and 30 d after treatment.RESULTS: The activities of PERV-RT enzyme in pig liver and muscle cell-free supernatants were higher than in normal human controls. PERV-TR enzyme activity did not increase in patients before and after 1 mo of treatment.PERV-RT activities were not significantly different when compared with pre-treatment group (1.544±0.155576), the post-treatment groups (1.501±0.053507, 1.461±0.033808 and 1.6006667±0.01963 for 0, 14 and 30 d post-treatment,respectively, P>0.05), and normal control group (1.440±1.0641, P>0.05). RT enzyme activity in Chinese experimental mini-pigs was higher than in normal human control group (1.440±1.0641 U/mL, P0.05) when compared with the pig breeds except in the muscle supernatants. All the samples including muscle and liver cell supernatants from the Chinese mini-experimental pigs and the four domestic Chinese pig breeds contained PERVs.CONCLUSION: These results suggest that the risk of PERV infection through BALSS containing porcine liver cells without immunosuppressants may be quite low. Although there were PERVs in Chinese experimental mini-pigs and porcine liver cell culture suspensions, we did not find any evidence of persistent PERV infection in patients treated with this porcine hepatocyte-based bioartificial

  6. Genomic dairy cattle breeding

    DEFF Research Database (Denmark)

    Mark, Thomas; Sandøe, Peter

    2010-01-01

    it less accountable to the concern of private farmers for the welfare of their animals. It is argued that there is a need to mobilise a wide range of stakeholders to monitor developments and maintain pressure on breeding companies so that they are aware of the need to take precautionary measures to avoid...... these new genomic tools are especially useful for traits relating to animal welfare that are difficult to improve using traditional breeding tools, they may also facilitate breeding schemes with reduced generation intervals carrying a higher risk of unwanted side-effects on animal welfare. In this paper...... negative effects on animal welfare and to invest in breeding for increased animal welfare. Researchers are encouraged to further investigate the long-term effects of various breeding schemes that rely on genomic breeding values....

  7. Induced mutations in sesame breeding

    International Nuclear Information System (INIS)

    The scope of induced mutations in sesame (Sesamum indicum L.) breeding is reviewed. So far in Egypt, India, Iraq, Rep. of Korea, and Sri Lanka, 14 officially released varieties have been developed through induced mutations: 12 directly and 2 through cross breeding (one using the 'dt45' induced mutant from Israel). For another variety released in China there are no details. The induced mutations approach was adopted primarily in order to obtain genetic variability that was not available in the germplasm collection. The mutagens commonly applied have been gamma rays, EMS and sodium azide. Sesame seeds can withstand high mutagen doses, and there are genotypic differences in sensitivity between varieties. The mutants induced in the above named countries and others include better yield, improved seed retention, determinate habit, modified plant architecture and size, more uniform and shorter maturation period, earliness, resistance to diseases, genic male sterility, seed coat color, higher oil content and modified fatty acids composition. Some of the induced mutants have already given rise to improved varieties, the breeding value of other mutants is now being assessed and still others can serve as useful markers in genetic studies and breeding programmes. (author)

  8. Ecosystem-based approach to aquaculture management

    Directory of Open Access Journals (Sweden)

    Patrick White

    2008-12-01

    Full Text Available Ecosystems have real thresholds and limits which, when exceeded, can affect major system restructuring. Once thresholds and limits have been exceeded, changes can be irreversible. Diversity is important to ecosystem functioning. The ecosystem approach is a strategy for the integrated management of land, water, and living resources that promotes conservation and sustainable use in an equitable way. The application of the ecosystem approach will help to reach a balance of the three main objectives: conservation, sustainable use, and a fair and equitable sharing of the benefits and use of the natural resources. Aquaculture development needs to be within the carrying capacity of the water resource so that it is sustainable and does not greatly impact the environment. The determination of the carrying capacity needs to be science-based. The planning of development in ecosystems has been done for freshwater ecosystems within the PAMB (Protected Area Management Board framework, but in many cases this does not give the correct significance to the impact of aquaculture on the water resources in the ecosystem. It also needs to be extended to river basins and estuaries, brackishwater areas, and inland bays, and seas. The planning and management of aquaculture needs to be undertaken at the local government unit (LGU level in a coordinated manner by all the LGUs that have a part of the water resource. The co-management of aquaculture, in terms of monitoring of the environment, monitoring of production, and monitoring of licenses, needs to be funded out of license fees and non-compliance fines collected by the LGUs. A number of these management activities need to be undertaken jointly (monitoring the environment and others separately but in a coordinated manner (e.g., checking licenses and checking compliance.

  9. Traditional vs modern: role of breed type in determining enteric methane emissions from cattle grazing as part of contrasting grassland-based systems.

    Directory of Open Access Journals (Sweden)

    Mariecia D Fraser

    Full Text Available Ruminant livestock turn forages and poor-quality feeds into human edible products, but enteric methane (CH4 emissions from ruminants are a significant contributor to greenhouse gases (GHGs and hence to climate change. Despite the predominance of pasture-based beef production systems in many parts of Europe there are little data available regarding enteric CH4 emissions from free-ranging grazing cattle. It is possible that differences in physiology or behaviour could influence comparative emissions intensities for traditional and modern breed types depending on the nutritional characteristics of the herbage grazed. This study investigated the role of breed type in influencing CH4 emissions from growing beef steers managed on contrasting grasslands typical of intensive (lowland and extensive (upland production systems. Using the SF6 dilution technique CH4 emissions were estimated for a modern, fast-growing crossbred (Limousin cross and a smaller and hardier native breed (Welsh Black when grazing lowland perennial ryegrass (high nutritional density, low sward heterogeneity and semi-improved upland pasture (low/medium nutritional density, high sward heterogeneity. Live-weight gain was substantially lower for steers on the upland system compared to the lowland system (0.31 vs. 1.04 kg d-1; s.e.d. = 0.085 kg d-1; P<0.001, leading to significant differences in estimated dry matter intakes (8.0 vs. 11.1 kg DM d-1 for upland and lowland respectively; s.e.d. = 0.68 kg DM d-1; P<0.001. While emissions per unit feed intake were similar for the lowland and upland systems, CH4 emissions per unit of live-weight gain (LWG were substantially higher when the steers grazed the poorer quality hill pasture (760 vs 214 g kg-1 LWG; s.e.d. = 133.5 g kg-1 LWG; P<0.001. Overall any effects of breed type were relatively small relative to the combined influence of pasture type and location.

  10. Traditional vs modern: role of breed type in determining enteric methane emissions from cattle grazing as part of contrasting grassland-based systems.

    Science.gov (United States)

    Fraser, Mariecia D; Fleming, Hannah R; Moorby, Jon M

    2014-01-01

    Ruminant livestock turn forages and poor-quality feeds into human edible products, but enteric methane (CH4) emissions from ruminants are a significant contributor to greenhouse gases (GHGs) and hence to climate change. Despite the predominance of pasture-based beef production systems in many parts of Europe there are little data available regarding enteric CH4 emissions from free-ranging grazing cattle. It is possible that differences in physiology or behaviour could influence comparative emissions intensities for traditional and modern breed types depending on the nutritional characteristics of the herbage grazed. This study investigated the role of breed type in influencing CH4 emissions from growing beef steers managed on contrasting grasslands typical of intensive (lowland) and extensive (upland) production systems. Using the SF6 dilution technique CH4 emissions were estimated for a modern, fast-growing crossbred (Limousin cross) and a smaller and hardier native breed (Welsh Black) when grazing lowland perennial ryegrass (high nutritional density, low sward heterogeneity) and semi-improved upland pasture (low/medium nutritional density, high sward heterogeneity). Live-weight gain was substantially lower for steers on the upland system compared to the lowland system (0.31 vs. 1.04 kg d-1; s.e.d. = 0.085 kg d-1; P<0.001), leading to significant differences in estimated dry matter intakes (8.0 vs. 11.1 kg DM d-1 for upland and lowland respectively; s.e.d. = 0.68 kg DM d-1; P<0.001). While emissions per unit feed intake were similar for the lowland and upland systems, CH4 emissions per unit of live-weight gain (LWG) were substantially higher when the steers grazed the poorer quality hill pasture (760 vs 214 g kg-1 LWG; s.e.d. = 133.5 g kg-1 LWG; P<0.001). Overall any effects of breed type were relatively small relative to the combined influence of pasture type and location. PMID:25259617

  11. Evaluating face trustworthiness: a model based approach

    Science.gov (United States)

    Baron, Sean G.; Oosterhof, Nikolaas N.

    2008-01-01

    Judgments of trustworthiness from faces determine basic approach/avoidance responses and approximate the valence evaluation of faces that runs across multiple person judgments. Here, based on trustworthiness judgments and using a computer model for face representation, we built a model for representing face trustworthiness (study 1). Using this model, we generated novel faces with an increased range of trustworthiness and used these faces as stimuli in a functional Magnetic Resonance Imaging study (study 2). Although participants did not engage in explicit evaluation of the faces, the amygdala response changed as a function of face trustworthiness. An area in the right amygdala showed a negative linear response—as the untrustworthiness of faces increased so did the amygdala response. Areas in the left and right putamen, the latter area extended into the anterior insula, showed a similar negative linear response. The response in the left amygdala was quadratic—strongest for faces on both extremes of the trustworthiness dimension. The medial prefrontal cortex and precuneus also showed a quadratic response, but their response was strongest to faces in the middle range of the trustworthiness dimension. PMID:19015102

  12. Evaluating face trustworthiness: a model based approach.

    Science.gov (United States)

    Todorov, Alexander; Baron, Sean G; Oosterhof, Nikolaas N

    2008-06-01

    Judgments of trustworthiness from faces determine basic approach/avoidance responses and approximate the valence evaluation of faces that runs across multiple person judgments. Here, based on trustworthiness judgments and using a computer model for face representation, we built a model for representing face trustworthiness (study 1). Using this model, we generated novel faces with an increased range of trustworthiness and used these faces as stimuli in a functional Magnetic Resonance Imaging study (study 2). Although participants did not engage in explicit evaluation of the faces, the amygdala response changed as a function of face trustworthiness. An area in the right amygdala showed a negative linear response-as the untrustworthiness of faces increased so did the amygdala response. Areas in the left and right putamen, the latter area extended into the anterior insula, showed a similar negative linear response. The response in the left amygdala was quadratic--strongest for faces on both extremes of the trustworthiness dimension. The medial prefrontal cortex and precuneus also showed a quadratic response, but their response was strongest to faces in the middle range of the trustworthiness dimension. PMID:19015102

  13. Breeding for genetic resistance to disease

    OpenAIRE

    Pinard-van der Laan, Marie-Helene

    2012-01-01

    Animal health issues are of increasing importance to all animal breeding sectors, including poultry, by raising health and welfare issues and causing major production costs, but also to citizens, by affecting possibly their own health and lifestyle choices. So far, traditional selective breeding approaches have been applied successfully by poultry breeders to enhance production and reproduction traits; but the inclusion of animal health related traits are scarcely considered because of a clea...

  14. Precocious flowering of juvenile citrus induced by a viral vector based on Citrus leaf blotch virus: a new tool for genetics and breeding.

    Science.gov (United States)

    Velázquez, Karelia; Agüero, Jesús; Vives, María C; Aleza, Pablo; Pina, José A; Moreno, Pedro; Navarro, Luis; Guerri, José

    2016-10-01

    The long juvenile period of citrus trees (often more than 6 years) has hindered genetic improvement by traditional breeding methods and genetic studies. In this work, we have developed a biotechnology tool to promote transition from the vegetative to the reproductive phase in juvenile citrus plants by expression of the Arabidopsis thaliana or citrus FLOWERING LOCUS T (FT) genes using a Citrus leaf blotch virus-based vector (clbvINpr-AtFT and clbvINpr-CiFT, respectively). Citrus plants of different genotypes graft inoculated with either of these vectors started flowering within 4-6 months, with no alteration of the plant architecture, leaf, flower or fruit morphology in comparison with noninoculated adult plants. The vector did not integrate in or recombine with the plant genome nor was it pollen or vector transmissible, albeit seed transmission at low rate was detected. The clbvINpr-AtFT is very stable, and flowering was observed over a period of at least 5 years. Precocious flowering of juvenile citrus plants after vector infection provides a helpful and safe tool to dramatically speed up genetic studies and breeding programmes.

  15. Precocious flowering of juvenile citrus induced by a viral vector based on Citrus leaf blotch virus: a new tool for genetics and breeding.

    Science.gov (United States)

    Velázquez, Karelia; Agüero, Jesús; Vives, María C; Aleza, Pablo; Pina, José A; Moreno, Pedro; Navarro, Luis; Guerri, José

    2016-10-01

    The long juvenile period of citrus trees (often more than 6 years) has hindered genetic improvement by traditional breeding methods and genetic studies. In this work, we have developed a biotechnology tool to promote transition from the vegetative to the reproductive phase in juvenile citrus plants by expression of the Arabidopsis thaliana or citrus FLOWERING LOCUS T (FT) genes using a Citrus leaf blotch virus-based vector (clbvINpr-AtFT and clbvINpr-CiFT, respectively). Citrus plants of different genotypes graft inoculated with either of these vectors started flowering within 4-6 months, with no alteration of the plant architecture, leaf, flower or fruit morphology in comparison with noninoculated adult plants. The vector did not integrate in or recombine with the plant genome nor was it pollen or vector transmissible, albeit seed transmission at low rate was detected. The clbvINpr-AtFT is very stable, and flowering was observed over a period of at least 5 years. Precocious flowering of juvenile citrus plants after vector infection provides a helpful and safe tool to dramatically speed up genetic studies and breeding programmes. PMID:26920394

  16. Neutronic Comparison of Tritium-Breeding Performance of Candidate Tritium-Breeding Materials

    Institute of Scientific and Technical Information of China (English)

    郑善良; 吴宜灿

    2003-01-01

    Tritium self-sustainment, which will meet the fuel requirement of fusion reactor, isone of the key issues of fusion power development. The tritium breeding performances of varioustritium-breeding materials are compared based on a series of neutronics calculations using three-dimensional Monte Carlo neutron-photon transport code MCNP/4C with the IAEA FENDL-2data library. The effects of the dimensions of the tritium-breeding zone and the enrichment of 6Lion Tritium Breeding Ratio (TBR) are analyzed. The effects of Be as a neutron multiplier on TBRare also calculated.

  17. Sugars in peach fruit: a breeding perspective.

    Science.gov (United States)

    Cirilli, Marco; Bassi, Daniele; Ciacciulli, Angelo

    2016-01-01

    The last decade has been characterized by a decrease in peach (Prunus persica) fruit consumption in many countries, foremost due to unsatisfactory quality. The sugar content is one of the most important quality traits perceived by consumers, and the development of novel peach cultivars with sugar-enhanced content is a primary objective of breeding programs to revert the market inertia. Nevertheless, the progress reachable through classical phenotypic selection is limited by the narrow genetic bases of peach breeding material and by the complex quantitative nature of the trait, which is deeply affected by environmental conditions and agronomical management. The development of molecular markers applicable in MAS or MAB has become an essential strategy to boost the selection efficiency. Despite the enormous advances in 'omics' sciences, providing powerful tools for plant genotyping, the identification of the genetic bases of sugar-related traits is hindered by the lack of adequate phenotyping methods that are able to address strong within-plant variability. This review provides an overview of the current knowledge of the metabolic pathways and physiological mechanisms regulating sugar accumulation in peach fruit, the main advances in phenotyping approaches and genetic background, and finally addressing new research priorities and prospective for breeders. PMID:26816618

  18. Tritium breeding materials

    International Nuclear Information System (INIS)

    Tritium breeding materials are essential to the operation of D-T fusion facilities. Both of the present options - solid ceramic breeding materials and liquid metal materials are reviewed with emphasis not only on their attractive features but also on critical materials issues which must be resolved

  19. Blackberry breeding and genetics

    Science.gov (United States)

    Blackberry (Rubus L. subgenus Rubus Watson) improvement has made substantial progress with over 400 cultivars named originating from wild selections to many releases from breeding efforts. Public breeding has been ongoing for over 100 years. The result of these improvements is commercial production ...

  20. Development and application of biological technologies in fish genetic breeding.

    Science.gov (United States)

    Xu, Kang; Duan, Wei; Xiao, Jun; Tao, Min; Zhang, Chun; Liu, Yun; Liu, ShaoJun

    2015-02-01

    Fish genetic breeding is a process that remolds heritable traits to obtain neotype and improved varieties. For the purpose of genetic improvement, researchers can select for desirable genetic traits, integrate a suite of traits from different donors, or alter the innate genetic traits of a species. These improved varieties have, in many cases, facilitated the development of the aquaculture industry by lowering costs and increasing both quality and yield. In this review, we present the pertinent literatures and summarize the biological bases and application of selection breeding technologies (containing traditional selective breeding, molecular marker-assisted breeding, genome-wide selective breeding and breeding by controlling single-sex groups), integration breeding technologies (containing cross breeding, nuclear transplantation, germline stem cells and germ cells transplantation, artificial gynogenesis, artificial androgenesis and polyploid breeding) and modification breeding technologies (represented by transgenic breeding) in fish genetic breeding. Additionally, we discuss the progress our laboratory has made in the field of chromosomal ploidy breeding of fish, including distant hybridization, gynogenesis, and androgenesis. Finally, we systematically summarize the research status and known problems associated with each technology.

  1. Buffaloes breeding in Brasil

    Directory of Open Access Journals (Sweden)

    O. Bernardes

    2010-02-01

    Full Text Available Differently from what one could formerly imagine, that buffalo breeding activity would be solely directed to fill the so called cattle breeding gaps determined by inadequate environmental conditions for ordinary cattle breeding, it has been actually seen that in those areas where breeders could successfully organize industrial-agricultural chains, either on meat or milk and its related products production, there has been an expressive expansion .Buffalo breeding has shown to be an important alternative not only in farms of higher technological level as also , and mainly, on small farms where it has become a key factor for increasing the average income, besides keeping labor force in country areas. This article intends to point out and examine some aspects of buffalo breeding and its potentialities in Brazil.

  2. New trends in plant breeding - example of soybean

    Directory of Open Access Journals (Sweden)

    Miladinović Jegor

    2015-01-01

    Full Text Available Soybean breeding and selection is a continual process designed to increase yield levels and improve resistance to biotic and abiotic stresses. Soybean breeders have been successful in producing a large number of varieties using conventional breeding methods, the Single Seed Descent method in particular. In recent decades, with the increased use of genetic transformations, backcrossing is more frequent though the only trait that has been commercialized is glyphosate tolerance. Physiological breeding poses a particular challenge, as well as phenotyping and development of useful criteria and techniques suitable for plant breeding. Using modern remote sensing techniques provides great opportunity for collecting a large amount of physiological data in real environment, which is necessary for physiological breeding. Molecular based plant breeding methods and techniques are a conceptual part of any serious breeding program. Among those methods, the most extensively used is marker-assisted selection, as a supplement to conventional breeding methods. [Projekat Ministarstva nauke Republike Srbije, br. TR-31022

  3. Economic Aspects of Using Induced Mutations in Plant Breeding

    International Nuclear Information System (INIS)

    Economic aspects of mutation plant breeding are considered in relation to basic principles of mutation induction and selection, when to use mutations in plant breeding programmes and mutation breeding strategies. The following basic principles of mutation plant breeding are outlined: - A imitation is induced in a single cell and expressed in the progeny from that cell. - Expression of a mutation is influenced by its genetic nature and the breeding system of the organism. - The mutation frequency determines the number of cell progenies that have to be examined to detect a particular mutant. - Random mutations in quantitatively inherited characters generally result in an increase in variance and a shift in the mean. Mutation rates for various types of mutations have been estimated and population sizes for mutation plant breeding experiments calculated. Based upon these principles the potential for using induced mutations in plant breeding and some breeding strategies are outlined. (author)

  4. From phenotyping towards breeding strategies: using in vivo indicator traits and genetic markers to improve meat quality in an endangered pig breed.

    Science.gov (United States)

    Biermann, A D M; Yin, T; König von Borstel, U U; Rübesam, K; Kuhn, B; König, S

    2015-06-01

    In endangered and local pig breeds of small population sizes, production has to focus on alternative niche markets with an emphasis on specific product and meat quality traits to achieve economic competiveness. For designing breeding strategies on meat quality, an adequate performance testing scheme focussing on phenotyped selection candidates is required. For the endangered German pig breed 'Bunte Bentheimer' (BB), no breeding program has been designed until now, and no performance testing scheme has been implemented. For local breeds, mainly reared in small-scale production systems, a performance test based on in vivo indicator traits might be a promising alternative in order to increase genetic gain for meat quality traits. Hence, the main objective of this study was to design and evaluate breeding strategies for the improvement of meat quality within the BB breed using in vivo indicator traits and genetic markers. The in vivo indicator trait was backfat thickness measured by ultrasound (BFiv), and genetic markers were allele variants at the ryanodine receptor 1 (RYR1) locus. In total, 1116 records of production and meat quality traits were collected, including 613 in vivo ultrasound measurements and 713 carcass and meat quality records. Additionally, 700 pigs were genotyped at the RYR1 locus. Data were used (1) to estimate genetic (co)variance components for production and meat quality traits, (2) to estimate allele substitution effects at the RYR1 locus using a selective genotyping approach and (3) to evaluate breeding strategies on meat quality by combining results from quantitative-genetic and molecular-genetic approaches. Heritability for the production trait BFiv was 0.27, and 0.48 for backfat thickness measured on carcass. Estimated heritabilities for meat quality traits ranged from 0.14 for meat brightness to 0.78 for the intramuscular fat content (IMF). Genetic correlations between BFiv and IMF were higher than estimates based on carcass backfat

  5. Molecular breeding of allergy vaccines and antiallergic cytokines.

    Science.gov (United States)

    Punnonen, J

    2000-03-01

    Molecular breeding, also called DNA shuffling, is a technology that enables the generation of large libraries of novel genes and vectors, from which improved variants can be selected based on functional properties. In a common format, it involves recursive recombination and mutation, performed by random fragmentation of related DNA sequences, followed by reassembly of the fragments in a self-priming polymerase chain reaction. As in natural evolution, the technique takes advantage of crossovers, deletions, insertions, inversions and point mutations of genes to generate large pools of related sequences. Molecular breeding can be used to generate improved variants of proteins used as therapeutics, such as vaccine antigens, growth factors and immunomodulatory molecules. Moreover, the technology can be applied to evolve entire viruses or vectors, including DNA vaccines. Cytokines downregulating allergic immune responses and allergens are attractive targets for evolution by molecular breeding. This review describes approaches to generate chimeric allergens with T cell epitopes from multiple allergen homologues, while reducing the recognition by preexisting IgE. In addition, the results and applications of molecular breeding in the evolution of improved antiallergic cytokines are discussed.

  6. Numerical study of regional environmental carrying capacity for livestock and poultry farming based on planting-breeding balance

    Institute of Scientific and Technical Information of China (English)

    Lihong Peng; Yu Bai

    2013-01-01

    In consideration of the need to maintain planting-breeding balance,this article examines the capacity of the soil in Putian City,Fujian Province to absorb livestock and poultry excreta,and computes the environmental carrying capacity for livestock and poultry farming (ECCLPF) in each district of the city in terms of the fertility characteristics of the soil in the city,as well as its mix of crops cultivated and farming methods.On the basis of the computations,this work proceeds to classify the alarm grades of the city's environmental carrying capacity for livestock and poultry framing,and assess the environmental impact of the livestock and poultry farming industry.The results of our study indicate that,the city's ECCLPF ranges from 8.27 to 23.23 heads per ha when computed on the basis of nitrogen,and from 5.79 to 24.53 heads per ha when computed on the basis of phosphorus.A comparison between our research findings and the existing fanning scale in Putian reveals that,in certain parts of the city,ECCLPF is overburdened to varying degrees.Specifically,Chengxiang District is severely overburdened,Hanjiang District and Meizhou Island have a level of overburdening between virtual overburdening and significant overburdening,Licheng District is virtually overburdened,and Xiuyu,Xianyou,and Bei'an Districts have not exceeded their environmental carrying capacity and therefore have varying levels of potential for growth.

  7. Evaluation of genetic diversity and relationships within and between two breeds of duck based on microsatellite markers

    Institute of Scientific and Technical Information of China (English)

    Fei Wu; Yinghua Huang; Ying Ma; Shengqiang Hu; Jinping Hao; Ning Li

    2009-01-01

    The genetic diversity of two natural populations (M, N-) of Beijing duck (Anas platyrhynchos) and 11 artificially selected lines of Bei-jing duck (A, B, E-L, O) from China Gold Star Duck Production Ltd., along with two Cherry Valley duck lines (C and D) from the British Cherry Valley Livestock Division, was evaluated using 18 microsatellite markers covering 16 linkage groups. A phylogenetic tree of the 15 populations of duck, formed of four main branches, was constructed from Nei's D_A genetic distance. The mean genetic differ-entiation index (F_(ST)) in all loci, Nei's standard genetic distance (Ds), and the genetic distance D_A between the Beijing duck and the Cherry Valley duck were 0.075, 0.143 and 0.142, respectively. These results demonstrated a high degree of genetic similarity between the two breeds and supported the hypothesis that the Cherry Valley duck was derived from the Beijing duck. The F_(ST) matrix of seven clusters of Beijing duck suggested that the efficiency of selection was not significant to some extent and should be supplemented by mar-ker-assisted selection.

  8. Maternal genealogical patterns of chicken breeds sampled in Europe.

    Science.gov (United States)

    Lyimo, C M; Weigend, A; Msoffe, P L; Hocking, P M; Simianer, H; Weigend, S

    2015-08-01

    The aim of this study was to investigate the maternal genealogical pattern of chicken breeds sampled in Europe. Sequence polymorphisms of 1256 chickens of the hypervariable region (D-loop) of mitochondrial DNA (mtDNA) were used. Median-joining networks were constructed to establish evolutionary relationships among mtDNA haplotypes of chickens, which included a wide range of breeds with different origin and history. Chicken breeds which have had their roots in Europe for more than 3000 years were categorized by their founding regions, encompassing Mediterranean type, East European type and Northwest European type. Breeds which were introduced to Europe from Asia since the mid-19th century were classified as Asian type, and breeds based on crossbreeding between Asian breeds and European breeds were classified as Intermediate type. The last group, Game birds, included fighting birds from Asia. The classification of mtDNA haplotypes was based on Liu et al.'s (2006) nomenclature. Haplogroup E was the predominant clade among the European chicken breeds. The results showed, on average, the highest number of haplotypes, highest haplotype diversity, and highest nucleotide diversity for Asian type breeds, followed by Intermediate type chickens. East European and Northwest European breeds had lower haplotype and nucleotide diversity compared to Mediterranean, Intermediate, Game and Asian type breeds. Results of our study support earlier findings that chicken breeds sampled in Europe have their roots in the Indian subcontinent and East Asia. This is consistent with historical and archaeological evidence of chicken migration routes to Europe.

  9. A discourse based approach in text-based machine translation

    CERN Document Server

    Ullah, Sana; Kwak, Kyung Sup

    2009-01-01

    This paper presents a theoretical research based approach to ellipsis resolution in machine translation. Moreover, the formula of discourse is applied in order to resolve ellipses. The validity of the discourse formula is analyzed by applying it to the real world text i.e. newspaper fragments. The source text is converted into mono-sentential discourses where complex discourses require further dissection either directly into primitive discourses or first into compound discourses and later into primitive ones. The procedure of dissection needs further improvement i.e. discovering as many primitive discourse forms as possible [1]. This work is further improvement to the concepts presented by Khan (Khan, 1995). Likewise, an attempt has been made to investigate new primitive discourses i.e. patterns from the given text.

  10. Minimally invasive surgery of the anterior skull base: transorbital approaches

    Science.gov (United States)

    Gassner, Holger G.; Schwan, Franziska; Schebesch, Karl-Michael

    2016-01-01

    Minimally invasive approaches are becoming increasingly popular to access the anterior skull base. With interdisciplinary cooperation, in particular endonasal endoscopic approaches have seen an impressive expansion of indications over the past decades. The more recently described transorbital approaches represent minimally invasive alternatives with a differing spectrum of access corridors. The purpose of the present paper is to discuss transorbital approaches to the anterior skull base in the light of the current literature. The transorbital approaches allow excellent exposure of areas that are difficult to reach like the anterior and posterior wall of the frontal sinus; working angles may be more favorable and the paranasal sinus system can be preserved while exposing the skull base. Because of their minimal morbidity and the cosmetically excellent results, the transorbital approaches represent an important addition to established endonasal endoscopic and open approaches to the anterior skull base. Their execution requires an interdisciplinary team approach. PMID:27453759

  11. RESEARCH REGARDING NATIVE DOMESTICATED ENDANGERED ANIMAL BREEDS

    Directory of Open Access Journals (Sweden)

    M. MATIUłI

    2013-12-01

    Full Text Available The research done in this paper was made in Transylvania and Banat. The autochthon domestic endangered animal breeds were inventoried, zonal maps on where to encounter these breeds being drawn. The list of these species contains: the gray cattle, the Mocanitza (the mountain breed sheep, the Transylvanian Pinzgau, the black Pinzgau, the Transylvanian bull, the Nonius horse, the Western mountain hores breed, the Mangalitza breed, the Bazna breed, the black of Strei, the Transylvanian Merino, the curly haired sheep of Banat, the white goat of Banat, the hound of Ardeal region. In the last 20 years, in these species there was a significant drop in numbers and, in some cases, even in quality. If urgent measures to preserve these species will not be taken, there is a possibility that in the next 10 years, some of them will disappear. The protection plans for these breeds are, in the majority of the cases, just simple projects that no one is applying. Since 2007, in the Faculty of Veterinary Medicine there is a Data Base to monitor the native domestic animals from the western area of Romania. The data from this data base are used by farmers, pickers and specialists from the food industry.

  12. Model Mapping Approach Based on Ontology Semantics

    Directory of Open Access Journals (Sweden)

    Jinkui Hou

    2013-09-01

    Full Text Available The mapping relations between different models are the foundation for model transformation in model-driven software development. On the basis of ontology semantics, model mappings between different levels are classified by using structural semantics of modeling languages. The general definition process for mapping relations is explored, and the principles of structure mapping are proposed subsequently. The approach is further illustrated by the mapping relations from class model of object oriented modeling language to the C programming codes. The application research shows that the approach provides a theoretical guidance for the realization of model mapping, and thus can make an effective support to model-driven software development

  13. 基于工厂化循环水繁育系统的胭脂鱼人工繁育效果%Effects of artificial breeding in Myxocyprinus asiaticus based on recirculation breeding system

    Institute of Scientific and Technical Information of China (English)

    张成林; 吴凡; 徐皓; 宿墨; 管崇武

    2013-01-01

    通过分析胭脂鱼传统繁育方式发展中出现的瓶颈,突出构建工厂化循环水繁育系统模式的必要性及紧迫性。介绍了重庆市万州区水产研究所总设备投资约为185万元、有效养殖水面为537.5 m2工厂化循环水繁育车间的系统构成及运行模式,着重分析了主要水质指标的变化及繁育车间的运行效果。结果显示:该繁育车间各系统运行稳定,水质指标正常,催产繁育效果明显,胭脂鱼受精卵孵化率及幼苗存活率分别可达93%和92%以上;经过6个批次的繁育,年产量500余万尾;年产值近1800万元,较往年增值700余万元,车间建设费用1年即可回收,经济社会效益显著,具备广泛的推广空间。同时,根据系统运行中存在的问题,提出了注意事项,并指出优化方向。%Through the analysis of the disadvantages of traditional breeding way in Myxocyprinus asiaticus, highlighting the necessity of building industrial recirculation breeding model .This paper introduced the system structure and operation mode of industrial recirculation breeding workshop in Chongqing Wanzhou District , which has total equipment investment of about 1.85 million Yuan and effective water aquaculture is square 537 .5 m2 .The results showed that all systems in the breeding workshop ran stably , the indicators of water quality was normal and the effect of breeding was obvious , the hatching rate and seeding survival rate of Myxocyprinus asiaticus reached more than 93%and 92%, respectively;annual output reached 5 million or so after 6 batches of breeding;annual production valued of nearly 18 million Yuan , which was added more than 700 Yuan compared with the previous year .The economic and social benefits were obvious .Meanwhile , according to the problems existed in system , this paper proposed considerations and pointed out optimization direction , in order to provide comprehensive support for the industrial

  14. Abstract algebra an inquiry based approach

    CERN Document Server

    Hodge, Jonathan K; Sundstrom, Ted

    2013-01-01

    ""This book arose from the authors' approach to teaching abstract algebra. They place an emphasis on active learning and on developing students' intuition through their investigation of examples. … The text is organized in such a way that it is possible to begin with either rings or groups.""-Florentina Chirtes, Zentralblatt MATH 1295

  15. Garlic breeding system innovations

    NARCIS (Netherlands)

    Zheng, S.J.; Kamenetsky, R.; Féréol, L.; Barandiaran, X.; Rabinowitch, H.D.; Chovelon, V.; Kik, C.

    2007-01-01

    This review outlines innovative methods for garlic breeding improvement and discusses the techniques used to increase variation like mutagenesis and in vitro techniques, as well as the current developments in florogenesis, sexual hybridization, genetic transformation and mass propagation. Sexual ste

  16. Birds - Breeding [ds60

    Data.gov (United States)

    California Department of Resources — This data set provides access to information gathered on annual breeding bird surveys in California using a map layer developed by the Department. This data layer...

  17. LINE CONSTRUCTION OF NONIUS BREED IN SLOVAKIA

    Directory of Open Access Journals (Sweden)

    Eva Mlyneková

    2013-12-01

    Full Text Available Nowadays breeding has become the problem often solved in European states and it has been paid much attention by breeding organizations. In terms of hippology as well as some urgent requirements from the side of nonius breeders we have focussed on this particular breed especially from the reason of its further survival and development in Slovakia. The aim of this paper was to evaluate the growth indicators as well as the achievement level of the stallions since 1927 to the present. Based on our research of the nonius body lines we can state that at present there are 3 stallions that are followers of the N VIII horse line founder. In general, there are 12 stallions that are active within this breed in Slovakia. It was statistically confirmed that this particular breed grew much stronger through the goal-directed breeding work, improved nutrition as well as the immediate breeding site. It was quite complicated to evaluate the performance tests because the individual indicators were significantly influenced by the subjective views of the commitee members performing the evaluation. The next factor which prevents the objective evaluation is the fact that in the period up to 1979, the performance tests were valued by the 100 point system and from the year 1980 by the 10 point system. That is why we take the performance test results into account only as supplemental ones, which can provide a kind of amendment to the observed biological parameters.

  18. Breeding for disease resistance

    OpenAIRE

    Pinard-van der Laan, Marie-Helene

    2013-01-01

    In the context of intensification and specialization of poultry production, next to welfare regulation on animal breeding, animal health issues are of increasing importance to the breeding sector because of the huge related production losses. But animal health and welfare issues are also of importance to the consumers because of potential effects on their own health and their lifestyle choices. Most effective disease control strategies should be developed in an integrated animal health manage...

  19. PRINCIPLES OF ANIMAL BREEDING

    OpenAIRE

    Sonja Jovanovac

    2014-01-01

    University textbook Principles of Animal Breeding is intended for students of agriculture and veterinary medicine. The material is the adapted curricula of undergraduate and graduate level studies in the framework of which the modules Principles of animal breeding as well as Basics of genetics and selection of animals attended are listened. The textbook contains 14 chapters and a glossary of terms. Its concept enables combining fundamental and modern knowledge in the ...

  20. Simulation Modeling in Plant Breeding: Principles and Applications

    Institute of Scientific and Technical Information of China (English)

    WANG Jian-kang; Wolfgang H Pfeiffer

    2007-01-01

    Conventional plant breeding largely depends on phenotypic selection and breeder's experience, therefore the breeding efficiency is low and the predictions are inaccurate. Along with the fast development in molecular biology and biotechnology, a large amount of biological data is available for genetic studies of important breeding traits in plants,which in turn allows the conduction of genotypic selection in the breeding process. However, gene information has not been effectively used in crop improvement because of the lack of appropriate tools. The simulation approach can utilize the vast and diverse genetic information, predict the cross performance, and compare different selection methods. Thus,the best performing crosses and effective breeding strategies can be identified. QuLine is a computer tool capable of defining a range, from simple to complex genetic models, and simulating breeding processes for developing final advanced lines. On the basis of the results from simulation experiments, breeders can optimize their breeding methodology and greatly improve the breeding efficiency. In this article, the underlying principles of simulation modeling in crop enhancement is initially introduced, following which several applications of QuLine are summarized, by comparing the different selection strategies, the precision parental selection, using known gene information, and the design approach in breeding. Breeding simulation allows the definition of complicated genetic models consisting of multiple alleles, pleiotropy, epistasis, and genes, by environment interaction, and provides a useful tool for breeders, to efficiently use the wide spectrum of genetic data and information available.

  1. Design of an F1 hybrid breeding strategy for ryegrasses based on selection of self-incompatibility locus-specific alleles.

    Science.gov (United States)

    Pembleton, Luke W; Shinozuka, Hiroshi; Wang, Junping; Spangenberg, German C; Forster, John W; Cogan, Noel O I

    2015-01-01

    Relatively modest levels of genetic gain have been achieved in conventional ryegrass breeding when compared to cereal crops such as maize, current estimates indicating an annual improvement of 0.25-0.6% in dry matter production. This property is partially due to an inability to effectively exploit heterosis through the formation of F1 hybrids. Controlled crossing of ryegrass lines from geographically distant origins has demonstrated the occurrence of heterosis, which can result in increases of dry matter production in the order of 25%. Although capture of hybrid vigor offers obvious advantages for ryegrass cultivar production, to date there have been no effective and commercially suitable methods for obtaining high proportions of F1 hybrid seed. Continued advances in fine-scale genetic and physical mapping of the gametophytic self-incompatibility (SI) loci (S and Z) of ryegrasses are likely in the near future to permit the identification of closely linked genetic markers that define locus-specific haplotypes, allowing prediction of allelic variants and hence compatibility between different plant genotypes. Given the availability of such information, a strategy for efficient generation of ryegrass cultivars with a high proportion of F1 hybrid individuals has been simulated, which is suitable for commercial implementation. Through development of two parental pools with restricted diversity at the SI loci, relative crossing compatibility between pools is increased. Based on simulation of various levels of SI allele diversity restriction, the most effective scheme will generate 83.33% F1 hybrids. Results from the study, including the impact of varying flowering time, are discussed along with a proposed breeding design for commercial application. PMID:26442077

  2. Game company marketing : Social media based approach

    OpenAIRE

    Jemeljanova, Olga

    2014-01-01

    The purpose of this thesis work was to conduct a research and plan a marketing strategy for a start-up game company in order to increase visibility and the number of company’s customers. The best suitable approach was found and implemented during the study. The project combined both technical and marketing aspects of media. The research was conducted on marketing, social media, and the current state of the game industry in Finland. Moreover, thirty existing game studios were selected for ...

  3. Evaluating a Pivot-Based Approach for Bilingual Lexicon Extraction

    Directory of Open Access Journals (Sweden)

    Jae-Hoon Kim

    2015-01-01

    Full Text Available A pivot-based approach for bilingual lexicon extraction is based on the similarity of context vectors represented by words in a pivot language like English. In this paper, in order to show validity and usability of the pivot-based approach, we evaluate the approach in company with two different methods for estimating context vectors: one estimates them from two parallel corpora based on word association between source words (resp., target words and pivot words and the other estimates them from two parallel corpora based on word alignment tools for statistical machine translation. Empirical results on two language pairs (e.g., Korean-Spanish and Korean-French have shown that the pivot-based approach is very promising for resource-poor languages and this approach observes its validity and usability. Furthermore, for words with low frequency, our method is also well performed.

  4. A polyhedral approach to computing border bases

    CERN Document Server

    Braun, Gábor

    2009-01-01

    Border bases can be considered to be the natural extension of Gr\\"obner bases that have several advantages. Unfortunately, to date the classical border basis algorithm relies on (degree-compatible) term orderings and implicitly on reduced Gr\\"obner bases. We adapt the classical border basis algorithm to allow for calculating border bases for arbitrary degree-compatible order ideals, which is \\emph{independent} from term orderings. Moreover, the algorithm also supports calculating degree-compatible order ideals with \\emph{preference} on contained elements, even though finding a preferred order ideal is NP-hard. Effectively we retain degree-compatibility only to successively extend our computation degree-by-degree. The adaptation is based on our polyhedral characterization: order ideals that support a border basis correspond one-to-one to integral points of the order ideal polytope. This establishes a crucial connection between the ideal and the combinatorial structure of the associated factor spaces.

  5. Using expected allele number as objective function to design between and within breed conservation of farm animal biodiversity.

    Science.gov (United States)

    Simianer, H

    2005-06-01

    Conservation of genetic diversity in farm animal species can be achieved by preventing extinction of breeds and by reducing genetic drift within breeds. It is suggested to use the expected number of alleles segregating in the species after a given time period as objective function in the design of conservation strategies. A formal approach is presented to predict this quantity based on marker information, accounting for extinction probability of breeds and effective population size within breeds as the major component of genetic drift. Based on this model, relative efficiency of different strategies of diversity conservation can be quantified. Formulas are given to derive the marginal expected number of alleles with respect to genetic drift within population and extinction probability, respectively. The suggested approach is illustrated with an example of 13 European cattle breeds. With the assumed parameters, drift is shown to be the major force leading to loss of alleles, and different breeds are prioritized for activities to reduce risk of extinction and for measures to reduce genetic drift, respectively. Although different aspects of the model need to be further refined, the suggested methodology provides a general and flexible tool to derive the optimum conservation strategy in various scenarios. PMID:16130469

  6. Pluig 'n Train - A Component Based Approach

    Directory of Open Access Journals (Sweden)

    Alke Martens

    2010-10-01

    Full Text Available Technology enhanced learning can look back on a comparably long tradition. Surprisingly, the software systems in this field are seldom constructed based on state-of-the art insights in software engineering. Using basic software engineering techniques involves system descriptions on a formal and abstract level, to use patterns for software development, and to implement the system in a re-usable and adaptable way. Our component based framework JaBInT (Java Based Intelligent Tutoring, which is based on a firm software engineering ground, allows for re-usability, adaptability, and flexibility in system development -- and might thus be a basis for teaching and training software used in ubiquitous learning as well.

  7. Media approach to gender-based violence

    OpenAIRE

    Mršević Zorica

    2012-01-01

    The author grounds her research and the latter analysis on continually conducted daily press-clipping of seven main printed daily newspapers and two main electronic media in Serbia, within the three years period (2009 - 2011). An analysis of media reports on gender based violence, with particular focus on the most frequent domestic violence cases within the two years period, 2010 to 2011 is presented. As the best of media reports on gender based violence, the author stressed out its „wh...

  8. CHARACTER RECOGNITION APPROACH BASED ON ONTOLOGY

    OpenAIRE

    Hacene Belhadef; Aicha Eutamene; Mohamed Khireddine Kholadi

    2011-01-01

    In this paper, we present a general description of a new character recognition process based on ontology, semantically annotated by a domain expert. Such process is based essentially on a matching step between two ontologies, the first represents a domain ontology, containing the typographical description of different characters represent an alphabet of a well definite language (Latin for example), the second ontology, describes the document in question in the form of concepts where each conc...

  9. Knowledge Based Company– a Theoretical Approach

    OpenAIRE

    Cuºu Dorinela

    2011-01-01

    In a stable economic environment, the change may be slow, and the organization would have time to react and maintain its competitive advantages. In contrast in a knowledge-based economy, the economic environment changes rapidly and the response is not the best alternative; in order to succeed, the organizations must be proactive, to anticipate, to be directed towards learning and permanently development. The main resource of a knowledge-based company is the knowledge. This company is focused ...

  10. Constructivism theory based learninga total quality approach /

    OpenAIRE

    Al Natsheh, Anas.; Komulainen, Ruey

    2008-01-01

    Constructivism theory is starting to gain substantial momentum in education process as a base for improving the learning environments and enhancing the learning outcomes. As the focus in constructivism theory based learning is shifted toward the learners, and the learners are expected to play an active role in the learning process, the issue of quality and consistency began to surface due to the absence of a clear quality process that can effectively check and control the learning outcomes. T...

  11. A Strength-Based Approach to Teacher Professional Development

    Science.gov (United States)

    Zwart, Rosanne C.; Korthagen, Fred A. J.; Attema-Noordewier, Saskia

    2015-01-01

    Based on positive psychology, self-determination theory and a perspective on teacher quality, this study proposes and examines a strength-based approach to teacher professional development. A mixed method pre-test/post-test design was adopted to study perceived outcomes of the approach for 93 teachers of six primary schools in the Netherlands and…

  12. EFL Reading Instruction: Communicative Task-Based Approach

    Science.gov (United States)

    Sidek, Harison Mohd

    2012-01-01

    The purpose of this study was to examine the overarching framework of EFL (English as a Foreign Language) reading instructional approach reflected in an EFL secondary school curriculum in Malaysia. Based on such analysis, a comparison was made if Communicative Task-Based Language is the overarching instructional approach for the Malaysian EFL…

  13. A strength-based approach to teacher professional development

    NARCIS (Netherlands)

    Zwart, Rosanne C.; Korthagen, Fred A J; Attema-Noordewier, Saskia

    2014-01-01

    Based on positive psychology, self-determination theory and a perspective on teacher quality, this study proposes and examines a strength-based approach to teacher professional development. A mixed method pre-test/post-test design was adopted to study perceived outcomes of the approach for 93 teache

  14. A strength-based approach to teacher professional development

    NARCIS (Netherlands)

    Zwart, Rosanne; Korthagen, Fred A J; Attema-Noordewier, Saskia

    2015-01-01

    Based on positive psychology, self-determination theory and a perspective on teacher quality, this study proposes and examines a strength-based approach to teacher professional development. A mixed method pre-test/post-test design was adopted to study perceived outcomes of the approach for 93 teache

  15. NEW APPROACH FOR SOFTWARE PROCESSES REUSING BASED ON SOFTWARE ARCHITECTURES

    OpenAIRE

    Aoussat, Fadila; Ahmed-Nacer, Mohamed; Oussalah, Mourad Chabane

    2010-01-01

    International audience; This paper deals with reusing of software process models. Based on the insufficiencies of existing software process reusing approaches (limited reusability of the software process components), we propose a new approach that promotes a large reuse of existing proven software process models even not oriented components. Our approach is based on two steps: we use domain ontology to capitalize the software process knowledge and we handle the inferred knowledge as software ...

  16. Rationales for Place-based Approaches in Scotland

    OpenAIRE

    Bynner, Claire

    2016-01-01

    The aim of this paper is to remove the confusion surrounding what place-based approaches are, the rationales behind their use, the development of this approach to public service reform in Scotland and the future challenges presented by austerity and welfare reform. Key arguments presented in this paper:  The rationales driving the emergence of new place-based approaches at the neighbourhood level include: o The Civic – in the need for higher quality, more responsive services and for co...

  17. Expanding the dairy herd in pasture-based systems: The role of sexed semen within alternative breeding strategies.

    Science.gov (United States)

    Murphy, C; Shalloo, L; Hutchinson, I A; Butler, S T

    2016-08-01

    A simulation model was developed to determine the effects of sexed semen use in heifers and lactating cows on replacement heifer numbers and rate of herd expansion in a seasonal dairy production system. Five separate artificial insemination (AI) protocols were established according to the type of semen used: (1) conventional frozen-thawed semen (CONV); (2) sexed semen in heifers and conventional semen used in cows (SS-HEIFER); (3) sexed semen in heifers and a targeted group of cows (body condition score ≥3 and calved ≥63 d), with conventional semen used in the remainder of cows (SS-CONV); (4) sexed semen in heifers and a targeted group of cows, with conventional semen in the remainder of cows for the first AI and conventional beef semen used for the second AI (SS-BEEF); or (5) sexed semen in heifers and a targeted group of cows, with conventional semen in the remainder of cows for the first AI and short gestation length semen used for the second AI (SS-SGL). Each AI protocol was assessed under 3 scenarios of sexed semen conception rate (SS-CR): 100, 94, and 87% relative to that of conventional semen. Artificial insemination was used on heifers for the first 3 wk and on cows for the first 6 wk of the 12-wk breeding season. The initial herd size was 100 cows, and all available replacement heifers were retained to facilitate herd expansion, up to a maximum herd size of 300 cows. Once maximum herd size was reached, all excess heifer calves were sold at 1 mo old. All capital expenditure associated with expansion was financed with a 15-yr loan. Each AI protocol was evaluated in terms of annual farm profit, annual cash flow, and total discounted net profit. The SS-CONV protocol generated more replacement heifers than all other AI protocols, facilitating faster expansion, and reached maximum herd size in yr 9, 9, and 10 for 100, 94, and 87% SS-CR, respectively. All AI protocols, except SS-BEEF and SS-SGL at 87% SS-CR, reached maximum herd size within the 15-yr period

  18. Breeding, genetic and genomic of citrus for disease resistance

    Directory of Open Access Journals (Sweden)

    Marcos A. Machado

    2011-10-01

    Full Text Available Although the citriculture is one of the most important economic activities in Brazil, it is based on a small number of varieties. This fact has contributed for the vulnerability of the culture regarding the phytosanitary problems. A higher number of varieties/genotypes with potential for commercial growing, either for the industry or fresh market, has been one of the main objectives of citrus breeding programs. The genetic breeding of citrus has improved, in the last decades, due to the possibility of an association between biotechnological tools and classical methods of breeding. The use of molecular markers for early selection of zygotic seedlings from controlled crosses resulted in the possibility of selection of a high number of new combination and, as a consequence, the establishment of a great number of hybrids in field experiments. The faster new tools are incorporated in the program, the faster is possibility to reach new genotypes that can be tested as a new variety. Good traits should be kept or incorporate, whereas bad traits have to be excluded or minimized in the new genotype. Scion and rootstock can not be considered separately, and graft compatibility, fruit quality and productivity are essential traits to be evaluated in the last stages of the program. The mapping of QTLs has favored breeding programs of several perennial species and in citrus it was possible to map several characteristics with qualitative and quantitative inheritance. The existence of linkage maps and QTLs already mapped, the development of EST and BAC library and the sequencing of the Citrus complete genome altogether make very demanding and urgent the exploration of such data to launch a wider genetic study of citrus. The rising of information on genome of several organisms has opened new approaches looking for integration between breeding, genetic and genome. Genome assisted selection (GAS involves more than gene or complete genome sequencing and is becoming

  19. Inventory analysis of West African cattle breeds

    International Nuclear Information System (INIS)

    The improvement of livestock productivity and the preservation of their genetic diversity to allow breeders to select animals adapted to environmental changes, diseases and social needs, require a detailed inventory and genetic characterization of domesticated animal breeds. Indeed, in developing countries, the notion of breed is not clearly defined, as visual traits are often used and characterization procedures are often subjective. So it is necessary to upgrade the phenotypic approach using genetic information. At CIRDES, a regional centre for subhumid livestock research and development, such studies have been conducted. This paper focuses on cattle breed inventory in seven countries of West Africa as a tool for genetic research on cattle improvement. Data collection was done using a bibliographical study, complemented by in situ investigations. According to phenotypic description and concepts used by indigenous livestock keepers, 13 local cattle breeds were recognized: N'dama, Kouri, the Baoule-Somba group, the Lagoon cattle group, zebu Azawak, zebu Maure, zebu Touareg, zebu Goudali, zebu Bororo, zebu White Fulani, zebu Djelli, zebu Peuhl soudanien and zebu Gobra (Toronke). Nine exotic breeds, (American Brahman, Gir, Girolando, Droughtmaster, Santa Gertrudis, Holstein, Montbeliarde, Jersey and Brown Swiss) and five typical cross-breeds (Holstein x Goudali; Montbeliarde x Goudali; Holstein x Azawak; Brown Swiss x Azawak; and Brown Swiss x zebu peuhl soudanien) were also found. From this initial investigation, the areas of heavy concentration of herds and the most important breeds were described. The review has also indicated the necessity for a balance between improving livestock productivity and the conservation of trypanotolerant breeds at risk of extinction in West Africa. (author)

  20. Breeding programmes for smallholder sheep farming systems: II. Optimization of cooperative village breeding schemes.

    Science.gov (United States)

    Gizaw, S; van Arendonk, J A M; Valle-Zárate, A; Haile, A; Rischkowsky, B; Dessie, T; Mwai, A O

    2014-10-01

    A simulation study was conducted to optimize a cooperative village-based sheep breeding scheme for Menz sheep of Ethiopia. Genetic gains and profits were estimated under nine levels of farmers' participation and three scenarios of controlled breeding achieved in the breeding programme, as well as under three cooperative flock sizes, ewe to ram mating ratios and durations of ram use for breeding. Under fully controlled breeding, that is, when there is no gene flow between participating (P) and non-participating (NP) flocks, profits ranged from Birr 36.9 at 90% of participation to Birr 21.3 at 10% of participation. However, genetic progress was not affected adversely. When there was gene flow from the NP to P flocks, profits declined from Birr 28.6 to Birr -3.7 as participation declined from 90 to 10%. Under the two-way gene flow model (i.e. when P and NP flocks are herded mixed in communal grazing areas), NP flocks benefited from the genetic gain achieved in the P flocks, but the benefits declined sharply when participation declined beyond 60%. Our results indicate that a cooperative breeding group can be established with as low as 600 breeding ewes mated at a ratio of 45 ewes to one ram, and the rams being used for breeding for a period of two years. This study showed that farmer cooperation is crucial to effect genetic improvement under smallholder low-input sheep farming systems.

  1. Evolutionary algorithm based configuration interaction approach

    CERN Document Server

    Chakraborty, Rahul

    2016-01-01

    A stochastic configuration interaction method based on evolutionary algorithm is designed as an affordable approximation to full configuration interaction (FCI). The algorithm comprises of initiation, propagation and termination steps, where the propagation step is performed with cloning, mutation and cross-over, taking inspiration from genetic algorithm. We have tested its accuracy in 1D Hubbard problem and a molecular system (symmetric bond breaking of water molecule). We have tested two different fitness functions based on energy of the determinants and the CI coefficients of determinants. We find that the absolute value of CI coefficients is a more suitable fitness function when combined with a fixed selection scheme.

  2. A New Text Location Approach Based Wavelet

    Institute of Scientific and Technical Information of China (English)

    Weihua Li; Zhen Fang; Shuozhong Wang

    2002-01-01

    With the advancement of content-based retrieval technology, the importance of semantics for text information contained in images attracts many researchers. An algorithm which will automatically locate the textual regions in the input image will facilitate the retrieving task, and the optical character recognizer can then be applied to only those regions of the image which contain text. In this paper a new text location method based wavelet is described, which can be used to locate textual regions from complex image and video frame. Experimental results show that the textual regions in image can be located effectively and quickly.

  3. Web Based ‘C’ IDE: Approach

    Directory of Open Access Journals (Sweden)

    Sravanthi Emani

    2012-03-01

    Full Text Available A Web based environment has been designed to execute C programs without explicitly installing any compilers on the machine, thus addressing the concerns of portability and accessibility. Theenvironment runs on a Linux server, uses password authentication and provides each user with separate project directories to store all his programs. These can be accessed and modified by the respective useronly. The entered code can be compiled and executed easily without using licensed software for the same. This saves installation time as well as memory of the client machine. The configuration of the machineneed not be an issue as the system is web based and thus platform independent.

  4. A model-based multisensor data fusion knowledge management approach

    Science.gov (United States)

    Straub, Jeremy

    2014-06-01

    A variety of approaches exist for combining data from multiple sensors. The model-based approach combines data based on its support for or refutation of elements of the model which in turn can be used to evaluate an experimental thesis. This paper presents a collection of algorithms for mapping various types of sensor data onto a thesis-based model and evaluating the truth or falsity of the thesis, based on the model. The use of this approach for autonomously arriving at findings and for prioritizing data are considered. Techniques for updating the model (instead of arriving at a true/false assertion) are also discussed.

  5. Environmentally Sustainable Architecture: Material-Based Technological Design Approach

    Directory of Open Access Journals (Sweden)

    Maziar Asefi

    2016-04-01

    Full Text Available This paper investigates material-based design approach in architectural forms where form generating process is informed by the combination of material properties and behavior as well as environmental constraints. It also tries to inform architects of the necessity of shift from formal form finding processes based on values of industrial age toward materiality in form generating processes. It also tries to overlook the current design practices in material-base design approaches to achieve a holistic understanding of the design process and possibilities. Through a comparative literature review, and an examination of current design practices, this paper elaborates on distinct material-based approach to design architectural form.

  6. The effects of dog breed development on genetic diversity and the relative influences of performance and conformation breeding.

    Science.gov (United States)

    Pedersen, N; Liu, H; Theilen, G; Sacks, B

    2013-06-01

    Genetic diversity was compared among eight dog breeds selected primarily for conformation (Standard Poodle, Italian Greyhound and show English Setter), conformation and performance (Brittany), predominantly performance (German Shorthaired and Wirehaired Pointers) or solely performance (field English Setter and Red Setter). Modern village dogs, which better reflect ancestral genetic diversity, were used as the standard. Four to seven maternal and one to two Y haplotypes were found per breed, with one usually dominant. Diversity of maternal haplotypes was greatest in village dogs, intermediate in performance breeds and lowest in conformation breeds. Maternal haplotype sharing occurred across all breeds, while Y haplotypes were more breed specific. Almost all paternal haplotypes were identified among village dogs, with the exception of the dominant Y haplotype in Brittanys, which has not been identified heretofore. The highest heterozygosity based on 24 autosomal microsatellites was found in village dogs and the lowest in conformation (show) breeds. Principal coordinate analysis indicated that conformation-type breeds were distinct from breeds heavily used for performance, the latter clustering more closely with village dogs. The Brittany, a well-established dual show and field breed, was also genetically intermediate between the conformation and performance breeds. The number of DLA-DRB1 alleles varied from 3 to 10 per breed with extensive sharing. SNPs across the wider DLA region were more frequently homozygous in all pure breeds than in village dogs. Compared with their village dog relatives, all modern breed dogs exhibit reduced genetic diversity. Genetic diversity was even more reduced among breeds under selection for show/conformation. PMID:23679949

  7. Analysis of SNPs in the KIT gene of cattle with different coat colour patterns and perspectives to use these markers for breed traceability and authentication of beef and dairy products

    Directory of Open Access Journals (Sweden)

    Vincenzo Russo

    2010-04-01

    Full Text Available The identification of the breed of origin of farm animals has recently assumed particular relevance as increasing interests in marketing mono-breed labelled lines of beef and dairy products have created the need to protect them from frauds. In order to develop DNA based breed traceability and authentication protocols, the first step is the identification of breed specific markers with high discriminatory power among breeds. We analysed two single nucleotide polymorphisms identified in exon 2 (g.72779776C>T and exon 3 (g.72783182A>G of the KIT gene (a candidate gene for the spotting locus in seven cattle breeds with different coat colour patterns (Italian Holstein-Friesian, no. = 61; Italian Brown, no. = 60; Italian Simmental, no. = 78; Jersey, no. = 60; Rendena, no. = 51; Reggiana, no. = 128; and Modenese, no. = 52. The two alleles of both SNPs were detected in all analysed breeds making their use unsuitable in breed traceabilty with a deterministic approach. Italian Simmental was almost fixed for the most common alleles (g.72779776C and g.72783182A. Haplotype analysis showed that spotted breeds (Italian Holstein-Friesian and Italian Simmental had only two haplotypes with one of them ([C:A] with high frequency (~90% and ~99%, respectively. Analysis of molecular variance (AMOVA averaged over the two loci indicated that genetic variation between spotted and non-spotted groups of breeds amounted to 25.3% (P<0.05 supporting a possible involvement of the KIT gene in influencing the spotted phenotype, but probably not determining it, as we previously suggested. Pairwise Fst values indicated significant differences between almost all pair of investigated breeds. The high discriminatory power of the analysed SNPs is an important characteristic for the inclusion of these markers in SNP panels useful for breed allocation and traceability based on probabilistic approaches.

  8. SLAM - Based Approach to Dynamic Ship Positioning

    Directory of Open Access Journals (Sweden)

    Krzysztof Wrobel

    2014-03-01

    Full Text Available Dynamically positioned vessels, used by offshore industry, use not only satellite navigation but also different positioning systems, often referred to as reference' systems. Most of them use multiple technical devices located outside the vessel which creates some problems with their accessibility and performance. In this paper, a basic concept of reference system independent from any external device is presented, basing on hydroacoustics and Simultaneous Localization and Mapping (SLAM method. Theoretical analysis of its operability is also performed.

  9. Media approach to gender-based violence

    Directory of Open Access Journals (Sweden)

    Mršević Zorica

    2012-01-01

    Full Text Available The author grounds her research and the latter analysis on continually conducted daily press-clipping of seven main printed daily newspapers and two main electronic media in Serbia, within the three years period (2009 - 2011. An analysis of media reports on gender based violence, with particular focus on the most frequent domestic violence cases within the two years period, 2010 to 2011 is presented. As the best of media reports on gender based violence, the author stressed out its „whistle blower“ role - media are the main source of information on cases, dimensions and forms of gender based violence. Also the worse moments of media reporting in the mentioned period are presented - when the violence was justified or when reality is deformed by presenting these cases as romantic love stories. For example, in 2010 the worst was reporting on the „Pajčin/Kapisoda“ case, while in 2011 it was the „Ponjiger“ case. In the end, the author also warned on the worrysome fact of sudden dissapearance of media reports on partners’ murdering their wives after the last such report published in mid-october 2011, which could mean that now we have a new problem of diminished freedom of media.

  10. [Evidence-based medicine: an epistemological approach].

    Science.gov (United States)

    Henao, Daniel Eduardo; Jaimes, Fabián Alberto

    2009-03-01

    Evidence-based medicine gathers physician's experience and the best scientific evidence to make medical decisions. This proposal has been widely promulgated by medical opinion leaders. Despite a large literature supporting this practice, a formal discussion has not been established regarding its epistemological consequences in daily medical work. The main proposal of evidence-based medicine consists of choosing the best medical decision according to the best available results from scientific studies. Herein, the goal was to highlight inappropriate application of the scientific method used by physics to clinical science. The inaccuracy resides in describing health and disease in strictly numeric equivalents that can be homogenized on a continuous scale. Finally, the authors consider each diseased human being as a complex system, unique and particular, and that this being is defined by an historical background as well as current actual context. Therefore, evidence-based medicine possesses certain limitations that must be recognized in order to to provide better health care to patients. PMID:19753837

  11. Environmentally Sustainable Architecture: Material-Based Technological Design Approach

    OpenAIRE

    Maziar Asefi; Zahra Afzali

    2016-01-01

    This paper investigates material-based design approach in architectural forms where form generating process is informed by the combination of material properties and behavior as well as environmental constraints. It also tries to inform architects of the necessity of shift from formal form finding processes based on values of industrial age toward materiality in form generating processes. It also tries to overlook the current design practices in material-base design approaches to achieve a ho...

  12. Postmodern Fuzzy System Theory: A Deconstruction Approach Based on Kabbalah

    OpenAIRE

    Gabriel Burstein; Constantin Virgil Negoita; Menachem Kranz

    2014-01-01

    Modern general system theory proposed a holistic integrative approach based on input-state-output dynamics as opposed to the traditional reductionist detail based approach. Information complexity and uncertainty required a fuzzy system theory, based on fuzzy sets and fuzzy logic. While successful in dealing with analysis, synthesis and control of technical engineering systems, general system theory and fuzzy system theory could not fully deal with humanistic and human-like intelligent systems...

  13. Two approaches to synthesis based on the domain theory

    DEFF Research Database (Denmark)

    Hansen, Claus Thorp; Andreasen, Mogens Myrup

    2002-01-01

    functional reasoning within each domain and between the domains seems to be ruled by the function-means law (Hubka´s law). On the basis of the domain theory and the function-means law we present two formal approaches to the synthesis of mechanical artefacts, namely a design-process-oriented approach and an...... artefact-oriented approach. The design-process-oriented synthesis approach can be seen as a basic design step for composite mechanical artefacts. The artefact-oriented approach has been utilised for the development of computer-based design support systems....

  14. Arts-based and creative approaches to dementia care.

    Science.gov (United States)

    McGreevy, Jessica

    2016-02-01

    This article presents a review of arts-based and creative approaches to dementia care as an alternative to antipsychotic medications. While use of antipsychotics may be appropriate for some people, the literature highlights the success of creative approaches and the benefits of their lack of negative side effects associated with antipsychotics. The focus is the use of biographical approaches, music, dance and movement to improve wellbeing, enhance social networks, support inclusive practice and enable participation. Staff must be trained to use these approaches. A case study is presented to demonstrate how creative approaches can be implemented in practice and the outcomes that can be expected when used appropriately. PMID:26938607

  15. A New Text Location Approach Based Wavelet

    Institute of Scientific and Technical Information of China (English)

    Weihua Li; Zhen Fang; Shuozhong Wang

    2002-01-01

    With the advancement of content-based retrieval technology, the importance of semantics for text information contained in images attracts many researchers. An algorithm which will automatically locate the textual regions in the input image will facilitate the retrieving task, and the optical character recognizer can then be applied to only those regions of the image which contain text. In this paper a new text location method is described, which can be used to locate textual regions from complex image and video frame. Experimental results show that the textual regions in image can be located effectively and quickly.

  16. EFFECT OF BREED, SEX AND SOURCE WITHIN BREED ON THE HEAMATOGICAL PARAMETERS OF THE NIGERIAN GOATS

    Directory of Open Access Journals (Sweden)

    J.C. OKONKWO

    2011-01-01

    Full Text Available Effect of breed, sex and source within breed, together with their interactions on the haematological parameters of Nigerian goats were studied using 81 goats (comprising 9 males and 18 females per breed, objective being to characterize and outline the differences and similarities between the breeds in blood parameters. The goats were derived from different geo-ecological zones in the country based on the areas of preponderance of each breed. The breeds studied were: the Sahel goat (SG, Red Sokoto goat (RSG, and West African Dwarf goat (WADG and hematological values obtained per breed were: 22.52±1.48, 23.04±3.56, and 29.22±4.76 (%PCV; 7.52±0.50, 7.82±1.25 and 9.48±1.60 (g/dl Hb; 2.71±0.23, 3.09±0.64, and 4.10±0.42 (x1012/l RBC; 11.94±1.10, 11.32±2.03 and 9.23±0.63 (x109cells/l WBC, and 83.22±1.67, 76.72±2.30 and 73.34±3.40 (x106/mm3 MCV, respectively. Significant differences (P0.05 for all the breeds. The WADGs were superior to the RSGs and SGs in PCV, Hb, and RBC counts, but lower in WBC counts and MCV. The SGs were similar in most of the haematological profiles examined, irrespective of geo-ecological distance, indicating homogeneity of the breed. The sahelian goat breed also outscored other breeds in MCV, showing that the breed has greater propensity to transport oxygen and in situation occasioning oxygen starvation, the breed survives better. This explains the reason for the survival of the breed in arid and semi-arid zone. Gender has no effect on the MCV and the values of 83.22±1.67x106/mm3, 76.72±2.30x106/mm3 and 73.34±3.40x106/mm3 were observed for the SG, RSG, and WADG, respectively.

  17. A novel approach to search for identity by descent in small samples of patients and controls from the same mendelian breeding unit: a pilot study on myopia.

    Science.gov (United States)

    Heath, S; Robledo, R; Beggs, W; Feola, G; Parodo, C; Rinaldi, A; Contu, L; Dana, D; Stambolian, D; Siniscalco, M

    2001-01-01

    Autosomal dominant high myopia, a genetic disorder already mapped to region 18p11.31, is common in Carloforte (Sardinia, Italy), an isolated village of 8,000 inhabitants descending from a founder group of 300 in the early 1700s. Fifteen myopic propositi and 36 normal controls were selected for not having ancestors in common at least up to the grandparental generation, although still descendants of the original founders. All subjects were genotyped for 14 markers located on autosome 18 at a resolution of about 10 cM. Allelic distributions were found to be similar at all tested loci in propositi and controls, except for the candidate marker D18S63 known to segregate in close linkage association with high myopia. In particular, the frequency of allele 85 among the propositi was almost double that of the controls (Fisher's exact test, p = 0.037). The association is more striking when the frequency of the genotype 85/85 in the two groups is compared (Fisher's exact test, p = 0.005). This conclusion was further evaluated through a bootstrap analysis by computing the overall probability of the observed data under the null hypothesis (i.e. no difference between the two groups in frequency distributions for the chromosome 18 markers). Again, marker D18S63 was found to have a sample probability lower than 0.004, which is significant at the 0.05 level after correcting for simultaneous testing of multiple loci. The study demonstrates the efficiency of our novel strategy to detect identity by descent (IBD) in small numbers of patients and controls when they are both part of well-defined Mendelian breeding units (MBUs). The iterative application of our strategy in separate MBUs is expected to become the method of choice to evaluate the ever-growing number of reported associations between candidate genes and multifactorial traits and diseases.

  18. An Event Based Approach To Situational Representation

    CERN Document Server

    Ashish, Naveen; Mehrotra, Sharad; Venkatasubramanian, Nalini

    2009-01-01

    Many application domains require representing interrelated real-world activities and/or evolving physical phenomena. In the crisis response domain, for instance, one may be interested in representing the state of the unfolding crisis (e.g., forest fire), the progress of the response activities such as evacuation and traffic control, and the state of the crisis site(s). Such a situation representation can then be used to support a multitude of applications including situation monitoring, analysis, and planning. In this paper, we make a case for an event based representation of situations where events are defined to be domain-specific significant occurrences in space and time. We argue that events offer a unifying and powerful abstraction to building situational awareness applications. We identify challenges in building an Event Management System (EMS) for which traditional data and knowledge management systems prove to be limited and suggest possible directions and technologies to address the challenges.

  19. Polyphase Order Analysis Based on Convolutional Approach

    Directory of Open Access Journals (Sweden)

    M. Drutarovsky

    1999-06-01

    Full Text Available The condition of rotating machines can be determined by measuring of periodic frequency components in the vibration signal which are directly related to the (typically changing rotational speed. Classical spectrum analysis with a constant sampling frequency is not an appropriate analysis method because of spectral smearing. Spectral analysis of vibration signal sampled synchronously with the angle of rotation, known as order analysis, suppress spectral smearing even with variable rotational speed. The paper presents optimised algorithm for polyphase order analysis based on non power of two DFT algorithm efficiently implemented by chirp FFT algorithm. Proposed algorithm decreases complexity of digital resampling algorithm, which is the most complex part of complete spectral order algorithm.

  20. Dictionary based Approach to Edge Detection

    CERN Document Server

    Chandra, Nitish

    2015-01-01

    Edge detection is a very essential part of image processing, as quality and accuracy of detection determines the success of further processing. We have developed a new self learning technique for edge detection using dictionary comprised of eigenfilters constructed using features of the input image. The dictionary based method eliminates the need of pre or post processing of the image and accounts for noise, blurriness, class of image and variation of illumination during the detection process itself. Since, this method depends on the characteristics of the image, the new technique can detect edges more accurately and capture greater detail than existing algorithms such as Sobel, Prewitt Laplacian of Gaussian, Canny method etc which use generic filters and operators. We have demonstrated its application on various classes of images such as text, face, barcodes, traffic and cell images. An application of this technique to cell counting in a microscopic image is also presented.

  1. Case-based approaches for knowledge application and organisational learning

    DEFF Research Database (Denmark)

    Wang, Chengbo; Johansen, John; Luxhøj, James T.;

    2005-01-01

    structured processes to execute the organisational learning and knowledge application, which intend to guide the practitioners during the process of manufacturing competence development and improvement. They are based on Case-Based Reasoning (CBR) methodology and rely on cases as the primary knowledge supply....... These practices and activity patterns are based on learning and applying the knowledge internal and external to an organisation. To ensure their smooth formulation process, there are two important techniques designed – an expert adaptation approach and an expert evaluation approach. These two approaches provide...

  2. Precision animal breeding

    OpenAIRE

    Flint, A.P.F.; WOOLLIAMS, J. A.

    2007-01-01

    We accept that we are responsible for the quality of life of animals in our care. We accept that the activities of man affect all the living things with which we share this planet. But we are slow to realize that as a result we have a duty of care for all living things. That duty extends to the breeding of animals for which we are responsible. When animals are bred by man for a purpose, the aim should be to meet certain goals: to improve the precision with which breeding outcomes can be predi...

  3. Empirical Analysis of the Typical Breeding Pattern of Clam in Hongdao Town and the Preliminary Estimates of Costs and Benefits

    Institute of Scientific and Technical Information of China (English)

    Xijuan; YANG; Shijun; ZHANG

    2014-01-01

    Based on the survey data about clam breeding farmers in Hongdao Town in August 2011,this paper analyzes the production and operation of typical clam breeding pattern,and estimates the costs and benefits. Through the analysis of operation conditions and economic conditions of Hongdao clam breeding,this paper aims to explore a more reasonable and effective breeding pattern so as to reduce breeding costs and market risks,and increase breeding farmers’ income.

  4. [Management of large marine ecosystem based on ecosystem approach].

    Science.gov (United States)

    Chu, Jian-song

    2011-09-01

    Large marine ecosystem (LME) is a large area of ocean characterized by distinct oceanology and ecology. Its natural characteristics require management based on ecosystem approach. A series of international treaties and regulations definitely or indirectly support that it should adopt ecosystem approach to manage LME to achieve the sustainable utilization of marine resources. In practices, some countries such as Canada, Australia, and U.S.A. have adopted ecosystem-based approach to manage their oceans, and some international organizations such as global environment fund committee have carried out a number of LME programs based on ecosystem approach. Aiming at the sustainable development of their fisheries, the regional organizations such as Caribbean Community have established regional fisheries mechanism. However, the adoption of ecosystem approach to manage LME is not only a scientific and legal issue, but also a political matter largely depending on the political will and the mutual cooperation degree of related countries.

  5. Application of site and haplotype-frequency based approaches for detecting selection signatures in cattle

    Directory of Open Access Journals (Sweden)

    Moore Stephen

    2011-06-01

    Full Text Available Abstract Background 'Selection signatures' delimit regions of the genome that are, or have been, functionally important and have therefore been under either natural or artificial selection. In this study, two different and complementary methods--integrated Haplotype Homozygosity Score (|iHS| and population differentiation index (FST--were applied to identify traces of decades of intensive artificial selection for traits of economic importance in modern cattle. Results We scanned the genome of a diverse set of dairy and beef breeds from Germany, Canada and Australia genotyped with a 50 K SNP panel. Across breeds, a total of 109 extreme |iHS| values exceeded the empirical threshold level of 5% with 19, 27, 9, 10 and 17 outliers in Holstein, Brown Swiss, Australian Angus, Hereford and Simmental, respectively. Annotating the regions harboring clustered |iHS| signals revealed a panel of interesting candidate genes like SPATA17, MGAT1, PGRMC2 and ACTC1, COL23A1, MATN2, respectively, in the context of reproduction and muscle formation. In a further step, a new Bayesian FST-based approach was applied with a set of geographically separated populations including Holstein, Brown Swiss, Simmental, North American Angus and Piedmontese for detecting differentiated loci. In total, 127 regions exceeding the 2.5 per cent threshold of the empirical posterior distribution were identified as extremely differentiated. In a substantial number (56 out of 127 cases the extreme FST values were found to be positioned in poor gene content regions which deviated significantly (p ST values were found in regions of some relevant genes such as SMCP and FGF1. Conclusions Overall, 236 regions putatively subject to recent positive selection in the cattle genome were detected. Both |iHS| and FST suggested selection in the vicinity of the Sialic acid binding Ig-like lectin 5 gene on BTA18. This region was recently reported to be a major QTL with strong effects on productive life

  6. Content-based, Task-based, and Participatory Approaches (I)

    Institute of Scientific and Technical Information of China (English)

    Diane Larsen-Freeman

    2012-01-01

    1. Introduction In this chapter we will be investigating three more approaches that make communication central: content-based instruction, task-based instruction, and the participatory approach. The approaches we examine in this chapter do not begin with functions, or approaches we examine in this chapter don't begin with functions, or indeed, any other language items. Instead, they give priority to process over predetermined linguistic content. In these approaches rather than "learning to use English",

  7. Poverty reduction Approaches in Kenya: Assessing the Usefulness of the Right Based Approach in Kenya

    Directory of Open Access Journals (Sweden)

    Wambua Leonard Munyao, Ph.D

    2013-06-01

    Full Text Available While billions of dollars have been spent in development projects in least developed countries, poverty continues to increase. This study proposes human-rights based approach to poverty eradication. To this end, the study seeks to assess the key determinants of use of rights- based approaches to poverty reduction and it’s usefulness in Kenya with special reference to NGOs in Kibera. The study further high lights some of the basic skills of implementing the rights based approach to poverty reduction. The attempts to establish the proportion of NGOs applying rights based approach to poverty reduction in Kibera Division as well. The review of relevant literature has been undertaken and a field study done. The study is informed by a qualitative human rights framework.

  8. A model-based approach to service creation

    NARCIS (Netherlands)

    Quartel, Dick A.C.; Sinderen, van Marten J.; Ferreira Pires, Luis

    1999-01-01

    This paper presents a model-based approach to support service creation. In this approach, services are assumed to be created from (available) software components. The creation process may involve multiple design steps in which the requested service is repeatedly decomposed into more detailed functio

  9. Effect of breed, gender, housing system and dietary crude protein content on performance of finishing beef cattle fed maize-silage-based diets.

    Science.gov (United States)

    Juniper, D T; Bryant, M J; Beever, D E; Fisher, A V

    2007-06-01

    Maize silage-based diets with three dietary crude protein (CP) supplements were offered to 96 finishing cattle of contrasting breed (Holstein Friesian (HF) v. Simmental × HF (SHF)) and gender (bull v. steer) housed in two types of feeding system (group fed v. individually fed). The three protein supplements differed either in CP or protein degradability (degradable (LUDP) v. rumen undegradable (HUDP)) and provided CP concentrations of 142 (Con), 175 (LUDP) and 179 (HUDP) g/kg dry matter (DM) respectively, with ratios of degradable to undegradable of 3.0, 1.4 and 0.9:1 for diets Con, LUDP and HUDP, respectively. DM intakes were marginally higher (P = 0.102) for LUDP when compared with Con and HUDP. Rates of daily live-weight gain (DLWG) were higher (P = 0.005) in LUDP and HUDP when compared with Con. HF had higher DM intakes than SHF although this did not result in any improvement in HF DLWG. Bulls had significantly better DM intakes, DLWG and feed conversion efficiency than steers. Conformation scores were better in SHF than HF (P carcass fat scores. PMID:22444477

  10. Avocado breeding in Cuba. State of the art biotechnologies

    International Nuclear Information System (INIS)

    Genetic diversity studies of avocado germplasm: Genetic diversity among avocado varieties cultivated in Cuba was undertaken considering 22 agronomic and morphological traits, 12 AFLP and 16 SSR primer combinations. Using agromorphological traits, cultivars clustered within racial groups confirming the ecological classification and a catalogue was prepared. AFLP and SSR markers were useful for providing a more accurate estimate of genetic distances between the cultivars. Identification and characterization of soil-borne isolates: A collection of Phytopohthora spp. and Phytium spp. strains isolated from commercial avocado orchards was constructed. Identification and characterization of these isolates was done based on morphological, physiological and molecular markers (ITS and Lpv 3 primers pairs) differentiating both genus and confirming the usefulness of using a combined approach for an accurate identification. A first description about P. palmivora affecting avocado trees in Cuba was reported based on morphological traits, maximum temperature of growing, amplification pattern using ITS primer combinations and sequencing information of the amplified product obtained with Lpv 3 primer pairs. Radiosensitivity curves useful for breeding purposes: Radiosensitivity curves to Gamma rays were determined in 'Duke-7' and 'Hass' cultivars commonly used as rootstocks. LD50 values were calculated to be 28 and 27 Gy for each cultivar, respectively. Selection for salinity conditions using zygotic embryos: Survival curves (LD50) were calculated for 'Duke-7' (56 mM of NaCl), 'Jose Antonio' (66 mM) and 'Catalina' (148 mM). LD20 and LD10 values, useful for breeding purposes, were also determined. Breeding avocado rootstocks using biotechnologies: An in vitro propagation method for avocado breeding purposes was optimized using zygotic embryos, combined with the LD50 values for Gamma rays and LD50 values for NaCl to obtain mutant lines from rootstock 'Duke-7' with improved salt

  11. Airframe integrity based on Bayesian approach

    Science.gov (United States)

    Hurtado Cahuao, Jose Luis

    Aircraft aging has become an immense challenge in terms of ensuring the safety of the fleet while controlling life cycle costs. One of the major concerns in aircraft structures is the development of fatigue cracks in the fastener holes. A probabilistic-based method has been proposed to manage this problem. In this research, the Bayes' theorem is used to assess airframe integrity by updating generic data with airframe inspection data while such data are compiled. This research discusses the methodology developed for assessment of loss of airframe integrity due to fatigue cracking in the fastener holes of an aging platform. The methodology requires a probability density function (pdf) at the end of SAFE life. Subsequently, a crack growth regime begins. As the Bayesian analysis requires information of a prior initial crack size pdf, such a pdf is assumed and verified to be lognormally distributed. The prior distribution of crack size as cracks grow is modeled through a combined Inverse Power Law (IPL) model and lognormal relationships. The first set of inspections is used as the evidence for updating the crack size distribution at the various stages of aircraft life. Moreover, the materials used in the structural part of the aircrafts have variations in their properties due to their calibration errors and machine alignment. A Matlab routine (PCGROW) is developed to calculate the crack distribution growth through three different crack growth models. As the first step, the material properties and the initial crack size are sampled. A standard Monte Carlo simulation is employed for this sampling process. At the corresponding aircraft age, the crack observed during the inspections, is used to update the crack size distribution and proceed in time. After the updating, it is possible to estimate the probability of structural failure as a function of flight hours for a given aircraft in the future. The results show very accurate and useful values related to the reliability

  12. Model Construct Based Enterprise Model Architecture and Its Modeling Approach

    Institute of Scientific and Technical Information of China (English)

    2002-01-01

    In order to support enterprise integration, a kind of model construct based enterprise model architecture and its modeling approach are studied in this paper. First, the structural makeup and internal relationships of enterprise model architecture are discussed. Then, the concept of reusable model construct (MC) which belongs to the control view and can help to derive other views is proposed. The modeling approach based on model construct consists of three steps, reference model architecture synthesis, enterprise model customization, system design and implementation. According to MC based modeling approach a case study with the background of one-kind-product machinery manufacturing enterprises is illustrated. It is shown that proposal model construct based enterprise model architecture and modeling approach are practical and efficient.

  13. Breeding for adaptation to drought

    International Nuclear Information System (INIS)

    Full text: I will describe an approach we have used to breed improved cowpea varieties for an environment that experiences very severe droughts - the African Sahel. I will then speculate on how this approach might be enhanced for cowpea and some other C3 species by including selection for carbon stable isotope composition, i.e carbon isotope discrimination by plants (Δ). The approach in breeding for adaptation to drought involved selecting parents and then progeny with a type of grain desired by consumers and optimal time of flowering and cycle length, incorporating resistances to important diseases and pests, and yield-testing advanced lines in many locations throughout the target production zone in experiment station and farm conditions over several years. Can we now make further progress in breeding to improve adaptation to drought by including selection for Δ? The approach I recommend is to choose varieties or elite lines as parents that have differences in Δ but similar high grain quality and optimal time to flowering, cycle length and harvest index. In many cases, pre-breeding will be needed to develop appropriate elite lines and it may be difficult to develop lines that differ in Δ but also have the other necessary traits. Then crosses would be made and progeny would be selected that have the required grain quality, phenology, harvest index, and multiple resistances to pests and diseases. Selected stable lines would be screened for Δ values. Finally, selected advanced lines would be subjected to the necessary multilocation tests for yield, grain quality and other agronomic traits in the target production zone. But, should one select for Δ values that are lower or higher than those of the best current cultivars? Theory and experimental tests have shown that for C3 species, Δ is negatively correlated with intrinsic, integrated water-use efficiency. Water-use efficiency (W) is the ratio of crop biomass production to transpiration. A yield

  14. Identifying malaria vector breeding habitats with remote sensing data and terrain-based landscape indices in Zambia

    Directory of Open Access Journals (Sweden)

    Shiff Clive

    2010-11-01

    Full Text Available Abstract Background Malaria, caused by the parasite Plasmodium falciparum, is a significant source of morbidity and mortality in southern Zambia. In the Mapanza Chiefdom, where transmission is seasonal, Anopheles arabiensis is the dominant malaria vector. The ability to predict larval habitats can help focus control measures. Methods A survey was conducted in March-April 2007, at the end of the rainy season, to identify and map locations of water pooling and the occurrence anopheline larval habitats; this was repeated in October 2007 at the end of the dry season and in March-April 2008 during the next rainy season. Logistic regression and generalized linear mixed modeling were applied to assess the predictive value of terrain-based landscape indices along with LandSat imagery to identify aquatic habitats and, especially, those with anopheline mosquito larvae. Results Approximately two hundred aquatic habitat sites were identified with 69 percent positive for anopheline mosquitoes. Nine species of anopheline mosquitoes were identified, of which, 19% were An. arabiensis. Terrain-based landscape indices combined with LandSat predicted sites with water, sites with anopheline mosquitoes and sites specifically with An. arabiensis. These models were especially successful at ruling out potential locations, but had limited ability in predicting which anopheline species inhabited aquatic sites. Terrain indices derived from 90 meter Shuttle Radar Topography Mission (SRTM digital elevation data (DEM were better at predicting water drainage patterns and characterizing the landscape than those derived from 30 m Advanced Spaceborne Thermal Emission and Reflection Radiometer (ASTER DEM. Conclusions The low number of aquatic habitats available and the ability to locate the limited number of aquatic habitat locations for surveillance, especially those containing anopheline larvae, suggest that larval control maybe a cost-effective control measure in the fight

  15. Hop Cultivars and Breeding

    Science.gov (United States)

    Pest management decision making in hops varies among cultivars. Historically, the primary objective of hop breeding programs has been to increase the yield or characteristics associated with either bittering (high alpha-acids) or aroma (unique volatile oil profiles) cultivars. Other factors consid...

  16. Mutation breeding in mangosteen

    International Nuclear Information System (INIS)

    Mangosteen the queen of the tropical fruits is apomitic and only a cultivar is reported and it reproduces asexually. Conventional breeding is not possible and the other methods to create variabilities are through genetic engineering and mutation breeding. The former technique is still in the infantry stage in mangosteen research while the latter has been an established tool in breeding to improve cultivars. In this mutation breeding seeds of mangosteen were irradiated using gamma rays and the LD 50 for mangosteen was determined and noted to be very low at 10 Gy. After sowing in the seedbed, the seedlings were transplanted in polybags and observed in the nursery bed for about one year before planted in the field under old oil palm trees in Station MARDI, Kluang. After evaluation and screening, about 120 mutant mangosteen plants were selected and planted in Kluang. The plants were observed and some growth data taken. There were some mutant plants that have good growth vigour and more vigorous that the control plants. The trial are now in the fourth year and the plants are still in the juvenile stage. (Author)

  17. Penguin breeding in Edinburgh

    NARCIS (Netherlands)

    Gillespie, T.H.; F.R.S.E.,; F.Z.S.,

    1939-01-01

    The Scottish National Zoological Park at Edinburgh has been notably successful in keeping and breeding penguins. It is happy in possessing as a friend and benefactor, Mr Theodore E. Salvesen, head of the firm of Christian Salvesen & Co., Leith, to whose interest and generosity it owes the great numb

  18. A Hierarchical Clustering Based Approach in Aspect Mining

    OpenAIRE

    Gabriela Czibula; Grigoreta Sofia Cojocar

    2012-01-01

    A Hierarchical Clustering Based Approach in Aspect Mining Clustering is a division of data into groups of similar objects. Aspect mining is a process that tries to identify crosscutting concerns in existing software systems. The goal is to refactor the existing systems to use aspect oriented programming, in order to make them easier to maintain and to evolve. The aim of this paper is to present a new hierarchical clustering based approach in aspect mining. For this purpose we propose HAC algo...

  19. Binaural HRTF Based Spatialisation: New Approaches and Implementation

    OpenAIRE

    Carty, Brian; Lazzarini, Victor

    2009-01-01

    New approaches to Head Related Transfer Function (HRTF) based artificial spatialisation of audio are presented and discussed in this paper. A brief summary of the topic of audio spatialisation and HRTF interpolation is offered, followed by an appraisal of the existing minimum phase HRTF interpolation method. Novel alternatives are then suggested which essentially approach the problem of phase interpolation more directly. The first technique, based on magnitude interpolati...

  20. Vision Based Fuzzy Control Approaches for Unmanned Aerial Vehicles

    OpenAIRE

    Olivares Mendez, Miguel Angel; Campoy, Pascual

    2015-01-01

    This paper proposed the use of vision based Fuzzy control approaches for autonomous navigation tasks with Unmanned Aerial Vehicles (UAVs). It is shown the advantages of using RGB cameras as the sensor onboard UAVs and the advantages of using Fuzzy logic controllers. It is explained how to set a vision based system and how to define a Fuzzy controller for a general control approach. A specific software was design and used to develop and tune general Fuzzy control app...

  1. A testability transformation approach for state-based programs

    OpenAIRE

    Kalaji, AS; Hierons, RM; Swift, S

    2009-01-01

    Search based testing approaches are efficient in test data generation; however they are likely to perform poorly when applied to programs with state variables. The problem arises when the target function includes guards that reference some of the program state variables whose values depend on previous function calls. Thus, merely considering the target function to derive test data is not sufficient. This paper introduces a testability transformation approach based on the analysis of contro...

  2. A scenario based approach for flexible resource loading under uncertainty

    OpenAIRE

    Wullink, G; Gademann, A.J.R.M.; Hans, E.W.; Harten, van, W.H.

    2003-01-01

    Order acceptance decisions in manufacture-to-order environments are often made based on incomplete or uncertain information. To promise reliable due dates and to manage resource capacity adequately, resource capacity loading is an indispensable supporting tool. We propose a scenario based approach for resource loading under uncertainty that minimises the expected costs. The approach uses an MILP to find a plan that has minimum expected costs over all relevant scenarios. We propose an exact an...

  3. Building the crops of tomorrow: advantages of symbiont-based approaches to improving abiotic stress tolerance

    Energy Technology Data Exchange (ETDEWEB)

    Tringe, Susannah; Coleman-Derr, Devin

    2014-05-22

    The exponential growth in world population is feeding a steadily increasing global need for arable farmland, a resource that is already in high demand. This trend has led to increased farming on subprime arid and semi-arid lands, where limited availability of water and a host of environmental stresses often severely reduce crop productivity. The conventional approach to mitigating the abiotic stresses associated with arid climes is to breed for stress-tolerant cultivars, a time and labor intensive venture that often neglects the complex ecological context of the soil environment in which the crop is grown. In recent years, studies have attempted to identify microbial symbionts capable of conferring the same stress-tolerance to their plant hosts, and new developments in genomic technologies have greatly facilitated such research. Here, we highlight many of the advantages of these symbiont-based approaches and argue in favor of the broader recognition of crop species as ecological niches for a diverse community of microorganisms that function in concert with their plant hosts and each other to thrive under fluctuating environmental conditions

  4. Building the crops of tomorrow: advantages of symbiont-based approaches to improving abiotic stress tolerance

    Energy Technology Data Exchange (ETDEWEB)

    Coleman-Derr, Devin [USDOE Joint Genome Institute (JGI), Walnut Creek, CA (United States); Tringe, Susannah G. [USDOE Joint Genome Institute (JGI), Walnut Creek, CA (United States)

    2014-06-06

    The exponential growth in world population is feeding a steadily increasing global need for arable farmland, a resource that is already in high demand. This trend has led to increased farming on subprime arid and semi-arid lands, where limited availability of water and a host of environmental stresses often severely reduce crop productivity. The conventional approach to mitigating the abiotic stresses associated with arid climes is to breed for stress-tolerant cultivars, a time and labor intensive venture that often neglects the complex ecological context of the soil environment in which the crop is grown. In recent years, studies have attempted to identify microbial symbionts capable of conferring the same stress-tolerance to their plant hosts, and new developments in genomic technologies have greatly facilitated such research. Here in this paper, we highlight many of the advantages of these symbiont-based approaches and argue in favor of the broader recognition of crop species as ecological niches for a diverse community of microorganisms that function in concert with their plant hosts and each other to thrive under fluctuating environmental conditions

  5. Building the crops of tomorrow: advantages of symbiont-based approaches to improving abiotic stress tolerance

    Directory of Open Access Journals (Sweden)

    Devin eColeman-Derr

    2014-06-01

    Full Text Available The exponential growth in world population is feeding a steadily increasing global need for arable farmland, a resource that is already in high demand. This trend has led to increased farming on subprime arid and semi-arid lands, where limited availability of water and a host of environmental stresses often severely reduce crop productivity. The conventional approach to mitigating the abiotic stresses associated with arid climes is to breed for stress-tolerant cultivars, a time and labor intensive venture that often neglects the complex ecological context of the soil environment in which the crop is grown. In recent years, studies have attempted to identify microbial symbionts capable of conferring the same stress-tolerance to their plant hosts, and new developments in genomic technologies have greatly facilitated such research. Here, we highlight many of the advantages of these symbiont-based approaches and argue in favor of the broader recognition of crop species as ecological niches for a diverse community of microorganisms that function in concert with their plant hosts and each other to thrive under fluctuating environmental conditions.

  6. The application of AFLP fingerprinting in breeding of Brassica napus

    OpenAIRE

    Cuřínová, Petra

    2008-01-01

    AFLP markers are widely used in breeding in some other crops, but their utilization in breeding of Brassica crops is not so frequent. AFLP markers are used for molecular characterization of particular varieties or genotypes and for evaluation of genetic diversity. The aim of this thesis was the application of this method in breeding of rapeseed and in comparative study of genetic variability of different oil seed rape cultivars of Czech, Czechoslovak and German origin. AFLP is based on select...

  7. The development of a new breed of sheep in Colombia.

    Science.gov (United States)

    Scott, H M; Ospina, O; Williams, H L

    1990-01-01

    A new breed of sheep has been developed in Colombia by crossing Scottish Blackface rams with the indigenous Criolla ewes and then interbreeding the progeny, with selection based on performance. It has been given the name Manchada Paramuna. The breed has been developed to provide the small producer (campesino) with a breeding ewe which has a high level of fertility, a good fleece, and which produces lambs with high survival rate and good growth rate. PMID:2331588

  8. Mutation breeding newsletter. No. 45

    International Nuclear Information System (INIS)

    This issue of the Mutation Breeding newsletter contains 39 articles dealing with radiation induced mutations and chemical mutagenesis techniques in plant breeding programs with the aims of improving crop productivity and disease resistance as well as exploring genetic variabilities

  9. A Programmable Approach to Maintenance of a Finite Knowledge Base

    Institute of Scientific and Technical Information of China (English)

    LUAN ShangMin(栾尚敏); DAI GuoZhong(戴国忠); LI Wei(李未)

    2003-01-01

    In this paper, we present a programmable method of revising a finite clause set. We first present a procedure whose formal parameters are a consistent clause set Γ and a clause A and whose output is a set of minimal subsets of Γ which are inconsistent with A. The maximal consistent subsets can be generated from all minimal inconsistent subsets. We develop a prototype system based on the above procedure, and discuss the implementation of knowledge base maintenance. At last, we compare the approach presented in this paper with other related approaches. The main characteristic of the approach is that it can be implemented by a computer program.

  10. EVALUATING PHOTOGRAMMETRIC APPROACH OF IMAGE-BASED POSITIONING

    OpenAIRE

    Li, X; Wang, J.

    2012-01-01

    In recent years, researches in the domain of location-based services have increasingly focused on developing and utilizing alternative positioning techniques for in GPS-denied environment. Image based positioning technique holds good promise for such applications. In this paper, a previously proposed image-based positioning system using photogrammetric methods has been put into rigorous evaluation. The precision and accuracy of such photogrammetric approach of image-based positioning is depen...

  11. Remote sensing new model for monitoring the east Asian migratory locust infections based on its breeding circle

    Science.gov (United States)

    Han, Xiuzhen; Ma, Jianwen; Bao, Yuhai

    2006-12-01

    Currently the function of operational locust monitor system mainly focused on after-hazards monitoring and assessment, and to found the way effectively to perform early warning and prediction has more practical meaning. Through 2001, 2002 two years continuously field sample and statistics for locusts eggs hatching, nymph growth, adults 3 phases observation, sample statistics and calculation, spectral measurements as well as synchronically remote sensing data processing we raise the view point of Remote Sensing three stage monitor the locust hazards. Based on the point of view we designed remote sensing monitor in three stages: (1) during the egg hitching phase remote sensing can retrieve parameters of land surface temperature (LST) and soil moisture; (2) during nymph growth phase locust increases appetite greatly and remote sensing can calculate vegetation index, leaf area index, vegetation cover and analysis changes; (3) during adult phase the locust move and assembly towards ponds and water ditches as well as less than 75% vegetation cover areas and remote sensing combination with field data can monitor and predicts potential areas for adult locusts to assembly. In this way the priority of remote sensing technology is elaborated effectively and it also provides technique support for the locust monitor system. The idea and techniques used in the study can also be used as reference for other plant diseases and insect pests.

  12. Content-based, Task-based, and Participatory Approaches (II)

    Institute of Scientific and Technical Information of China (English)

    Diane Larsen-Freeman

    2012-01-01

    4. Participatory Approach Although it originated in the early sixties with the work of Paulo Freire, and therefore antedates modern versions of content-based and task-based approaches, it was not until the 1980s that the participatory approach started being widely discussed in the language teaching literature.

  13. Efficient indica and japonica rice identification based on the InDel molecular method: Its implication in rice breeding and evolutionary research

    Institute of Scientific and Technical Information of China (English)

    Bao-Rong Lu; Xingxing Cai; Xin Jin

    2009-01-01

    An efficient molecular method for the accurate and efficient identification of indica and japonica rice was created based on the poly-morphisms of insertion/deletion (InDel) DNA fragments obtained from the basic local alignment search tool (BLAST) to the entire genomic sequences of indica (93-11) and japonica rice (Nipponbare). The 45 InDel loci were validated experimentally by the polymerase chain reaction (PCR) and polyacrylamide gel electrophoresis (PAGE) in 44 typical indica and japonica rice varieties, including 93-11 and Nipponbare. A neutrality test of the data matrix generated from electrophoretic banding patterns of various InDel loci indicated that 34 InDel loci were strongly associated with the differentiation of indica and japonica rice. More extensive analyses involving cultivated rice varieties from 11 Asian countries, and 12 wild Oryza species with various origins confirmed that indica and japonica characteristics could accurately be determined via calculating the average frequency of indica- or japonica-specific alleles on different InDel loci across the rice genome. This method was named as the "InDel molecular index" that combines molecular and statistical methods in determining the indica and japonica characteristics of rice varieties. Compared with the traditional methods based essentially on morphology, the InDel molecular index provides a very accurate, rapid, simple, and efficient method for identifying indica and japonica rice. In addition, the InDel index can be used to determine indica or japonica characteristics of wild Oryza species, which largely extends the utility of this method. The InDel molecular index provides a new tool for the effective selection of appropriate indica or japonica rice germplasm in rice breeding. It also offers a novel model for the study of the origin, evolution, and genetic differentiation of indica and japonica rice adapted to various environmental changes.

  14. Allele mining and enhanced genetic recombination for rice breeding.

    Science.gov (United States)

    Leung, Hei; Raghavan, Chitra; Zhou, Bo; Oliva, Ricardo; Choi, Il Ryong; Lacorte, Vanica; Jubay, Mona Liza; Cruz, Casiana Vera; Gregorio, Glenn; Singh, Rakesh Kumar; Ulat, Victor Jun; Borja, Frances Nikki; Mauleon, Ramil; Alexandrov, Nickolai N; McNally, Kenneth L; Sackville Hamilton, Ruaraidh

    2015-12-01

    Traditional rice varieties harbour a large store of genetic diversity with potential to accelerate rice improvement. For a long time, this diversity maintained in the International Rice Genebank has not been fully used because of a lack of genome information. The publication of the first reference genome of Nipponbare by the International Rice Genome Sequencing Project (IRGSP) marked the beginning of a systematic exploration and use of rice diversity for genetic research and breeding. Since then, the Nipponbare genome has served as the reference for the assembly of many additional genomes. The recently completed 3000 Rice Genomes Project together with the public database (SNP-Seek) provides a new genomic and data resource that enables the identification of useful accessions for breeding. Using disease resistance traits as case studies, we demonstrated the power of allele mining in the 3,000 genomes for extracting accessions from the GeneBank for targeted phenotyping. Although potentially useful landraces can now be identified, their use in breeding is often hindered by unfavourable linkages. Efficient breeding designs are much needed to transfer the useful diversity to breeding. Multi-parent Advanced Generation InterCross (MAGIC) is a breeding design to produce highly recombined populations. The MAGIC approach can be used to generate pre-breeding populations with increased genotypic diversity and reduced linkage drag. Allele mining combined with a multi-parent breeding design can help convert useful diversity into breeding-ready genetic resources. PMID:26606925

  15. Local fractal dimension based approaches for colonic polyp classification.

    Science.gov (United States)

    Häfner, Michael; Tamaki, Toru; Tanaka, Shinji; Uhl, Andreas; Wimmer, Georg; Yoshida, Shigeto

    2015-12-01

    This work introduces texture analysis methods that are based on computing the local fractal dimension (LFD; or also called the local density function) and applies them for colonic polyp classification. The methods are tested on 8 HD-endoscopic image databases, where each database is acquired using different imaging modalities (Pentax's i-Scan technology combined with or without staining the mucosa) and on a zoom-endoscopic image database using narrow band imaging. In this paper, we present three novel extensions to a LFD based approach. These extensions additionally extract shape and/or gradient information of the image to enhance the discriminativity of the original approach. To compare the results of the LFD based approaches with the results of other approaches, five state of the art approaches for colonic polyp classification are applied to the employed databases. Experiments show that LFD based approaches are well suited for colonic polyp classification, especially the three proposed extensions. The three proposed extensions are the best performing methods or at least among the best performing methods for each of the employed databases. The methods are additionally tested by means of a public texture image database, the UIUCtex database. With this database, the viewpoint invariance of the methods is assessed, an important features for the employed endoscopic image databases. Results imply that most of the LFD based methods are more viewpoint invariant than the other methods. However, the shape, size and orientation adapted LFD approaches (which are especially designed to enhance the viewpoint invariance) are in general not more viewpoint invariant than the other LFD based approaches.

  16. A Comparison of Filter-based Approaches for Model-based Prognostics

    Data.gov (United States)

    National Aeronautics and Space Administration — Model-based prognostics approaches use domain knowledge about a system and its failure modes through the use of physics-based models. Model-based prognosis is...

  17. APPROACH TO BREEDING SITE SELECTION OF KELP GULL (LARUS DOMINICANUS LICHTENSTEIN 1823) IN AN URBAN AREA FROM COQUIMBO REGION (CHILE) AND A NEW NESTING SUBSTRATE

    OpenAIRE

    Chávez-Villavicencio, C.

    2014-01-01

    An approach to the nest site selection of Kelp Gull (Larus dominicanus) in an urban area and a new nesting substrate is recorded. Data were collected between November 2012 and December 2013 in an urban area of the Coquimbo Region (Chile). The selection of sites was modeled with a logistic regression using two variables (distance to the nearest nest and distance closest to the sea) and selecting random points within the study area. 13 nests built mainly of thatch were recorded. ...

  18. 基于BLUP计算的山鸡育种分析管理软件开发%Development of a Pheasant Breeding Analysis and Management System Based on BLUP

    Institute of Scientific and Technical Information of China (English)

    陆雪林; 周洪钧; 高杨; 袁红艳; 赵乐乐; 梁永军

    2015-01-01

    The market of pheasant production has been increasing during the past three decades.However ,the current technology of pheasant breeding can not meet the requirement of growing pheasant market.Especially there has no any software to analyze and manage pheasant breed-ing.Thus ,a system is developed on nature of pheasant growing and breeding under practical requirements.Based on C/S model ,cloud platform and the latest.net ,the system is able to manage all traceable breeding data more safely and efficiently.Meanwhile ,it can highly calculate breeding values and aggregate values on a large quantity using BLUP estimation.Breeding of core pheasant group is on the basis of the aggregate values with pedigree ,siblings and individual as a unit.Then auto-apolegamy can be easily obtained among core pheasant group by their coeffi-cient of genetic relationship ,which will significantly increase the efficiency of breeding.%近30年来 ,我国山鸡市场越来越大 ,生产量也在不断增长 ,但山鸡育种水平与产业发展不相符 ,育种计算方面到目前为止还没有一个比较成熟的育种分析管理软件系统.本系统是根据山鸡生长和繁育特性 ,结合山鸡育种实际设计开发的一款山鸡育种分析管理软件.该软件系统基于C/S架构、利用先进的云平台大数据技术和最新的.net软件技术开发而成 ,实现了安全高效管理育种数据及所有数据信息的可追溯性 ,同时 ,也可完成大量山鸡生产性状育种值及各种综合育种值的最佳线性无偏预测高效计算.利用综合育种值 ,以山鸡家系、同胞和个体为单位 ,进行核心群的继代选留 ,选留后 ,核心群山鸡根据亲缘关系系数进行自动选配 ,大大提高了育种工作效率.

  19. Development of a Pheasant Breeding Analysis and Management System Based on BLUP%基于BLUP计算的山鸡育种分析管理软件开发

    Institute of Scientific and Technical Information of China (English)

    陆雪林; 周洪钧; 高杨; 袁红艳; 赵乐乐; 梁永军

    2015-01-01

    The market of pheasant production has been increasing during the past three decades.However ,the current technology of pheasant breeding can not meet the requirement of growing pheasant market.Especially there has no any software to analyze and manage pheasant breed-ing.Thus ,a system is developed on nature of pheasant growing and breeding under practical requirements.Based on C/S model ,cloud platform and the latest.net ,the system is able to manage all traceable breeding data more safely and efficiently.Meanwhile ,it can highly calculate breeding values and aggregate values on a large quantity using BLUP estimation.Breeding of core pheasant group is on the basis of the aggregate values with pedigree ,siblings and individual as a unit.Then auto-apolegamy can be easily obtained among core pheasant group by their coeffi-cient of genetic relationship ,which will significantly increase the efficiency of breeding.%近30年来 ,我国山鸡市场越来越大 ,生产量也在不断增长 ,但山鸡育种水平与产业发展不相符 ,育种计算方面到目前为止还没有一个比较成熟的育种分析管理软件系统.本系统是根据山鸡生长和繁育特性 ,结合山鸡育种实际设计开发的一款山鸡育种分析管理软件.该软件系统基于C/S架构、利用先进的云平台大数据技术和最新的.net软件技术开发而成 ,实现了安全高效管理育种数据及所有数据信息的可追溯性 ,同时 ,也可完成大量山鸡生产性状育种值及各种综合育种值的最佳线性无偏预测高效计算.利用综合育种值 ,以山鸡家系、同胞和个体为单位 ,进行核心群的继代选留 ,选留后 ,核心群山鸡根据亲缘关系系数进行自动选配 ,大大提高了育种工作效率.

  20. Component-Based Approach in Learning Management System Development

    Science.gov (United States)

    Zaitseva, Larisa; Bule, Jekaterina; Makarov, Sergey

    2013-01-01

    The paper describes component-based approach (CBA) for learning management system development. Learning object as components of e-learning courses and their metadata is considered. The architecture of learning management system based on CBA being developed in Riga Technical University, namely its architecture, elements and possibilities are…

  1. GPC Using a Delta-Domain Emulator-Based Approach

    DEFF Research Database (Denmark)

    Lauritsen, Morten Bach; Jensen, Morten Rostgaard; Poulsen, Niels Kjølstad

    1997-01-01

    This paper describes new approaches to generalized predictive control formulated in the delta (delta) domain. A new delta-domain version of the continuous-time emulator-based predictor is presented. It is shown to contain the optimal discrete-time predictor based on incomplete information as a sp...

  2. A SEMINAR-DISCUSSION-BASED APPROACH TOWARD LINGUISTICS

    Institute of Scientific and Technical Information of China (English)

    郎勇

    2002-01-01

    In this article, based on the experience of many years of teaching Linguistics courses to undergraduates, postgraduates and in-service teacher trainees, we argue that taking a seminar-discussion-based approach is a better way to achieve students' full involvement and understanding.

  3. Insights into the Genetic Relationships and Breeding Patterns of the African Tea Germplasm Based on nSSR Markers and cpDNA Sequences.

    Science.gov (United States)

    Wambulwa, Moses C; Meegahakumbura, Muditha K; Kamunya, Samson; Muchugi, Alice; Möller, Michael; Liu, Jie; Xu, Jian-Chu; Ranjitkar, Sailesh; Li, De-Zhu; Gao, Lian-Ming

    2016-01-01

    Africa is one of the key centers of global tea production. Understanding the genetic diversity and relationships of cultivars of African tea is important for future targeted breeding efforts for new crop cultivars, specialty tea processing, and to guide germplasm conservation efforts. Despite the economic importance of tea in Africa, no research work has been done so far on its genetic diversity at a continental scale. Twenty-three nSSRs and three plastid DNA regions were used to investigate the genetic diversity, relationships, and breeding patterns of tea accessions collected from eight countries of Africa. A total of 280 African tea accessions generated 297 alleles with a mean of 12.91 alleles per locus and a genetic diversity (H S) estimate of 0.652. A STRUCTURE analysis suggested two main genetic groups of African tea accessions which corresponded well with the two tea types Camellia sinensis var. sinensis and C. sinensis var. assamica, respectively, as well as an admixed "mosaic" group whose individuals were defined as hybrids of F2 and BC generation with a high proportion of C. sinensis var. assamica being maternal parents. Accessions known to be C. sinensis var. assamica further separated into two groups representing the two major tea breeding centers corresponding to southern Africa (Tea Research Foundation of Central Africa, TRFCA), and East Africa (Tea Research Foundation of Kenya, TRFK). Tea accessions were shared among countries. African tea has relatively lower genetic diversity. C. sinensis var. assamica is the main tea type under cultivation and contributes more in tea breeding improvements in Africa. International germplasm exchange and movement among countries within Africa was confirmed. The clustering into two main breeding centers, TRFCA, and TRFK, suggested that some traits of C. sinensis var. assamica and their associated genes possibly underwent selection during geographic differentiation or local breeding preferences. This study represents

  4. Insights into the Genetic Relationships and Breeding Patterns of the African Tea Germplasm Based on nSSR Markers and cpDNA Sequences.

    Science.gov (United States)

    Wambulwa, Moses C; Meegahakumbura, Muditha K; Kamunya, Samson; Muchugi, Alice; Möller, Michael; Liu, Jie; Xu, Jian-Chu; Ranjitkar, Sailesh; Li, De-Zhu; Gao, Lian-Ming

    2016-01-01

    Africa is one of the key centers of global tea production. Understanding the genetic diversity and relationships of cultivars of African tea is important for future targeted breeding efforts for new crop cultivars, specialty tea processing, and to guide germplasm conservation efforts. Despite the economic importance of tea in Africa, no research work has been done so far on its genetic diversity at a continental scale. Twenty-three nSSRs and three plastid DNA regions were used to investigate the genetic diversity, relationships, and breeding patterns of tea accessions collected from eight countries of Africa. A total of 280 African tea accessions generated 297 alleles with a mean of 12.91 alleles per locus and a genetic diversity (H S) estimate of 0.652. A STRUCTURE analysis suggested two main genetic groups of African tea accessions which corresponded well with the two tea types Camellia sinensis var. sinensis and C. sinensis var. assamica, respectively, as well as an admixed "mosaic" group whose individuals were defined as hybrids of F2 and BC generation with a high proportion of C. sinensis var. assamica being maternal parents. Accessions known to be C. sinensis var. assamica further separated into two groups representing the two major tea breeding centers corresponding to southern Africa (Tea Research Foundation of Central Africa, TRFCA), and East Africa (Tea Research Foundation of Kenya, TRFK). Tea accessions were shared among countries. African tea has relatively lower genetic diversity. C. sinensis var. assamica is the main tea type under cultivation and contributes more in tea breeding improvements in Africa. International germplasm exchange and movement among countries within Africa was confirmed. The clustering into two main breeding centers, TRFCA, and TRFK, suggested that some traits of C. sinensis var. assamica and their associated genes possibly underwent selection during geographic differentiation or local breeding preferences. This study represents

  5. Breeding schemes in reindeer husbandry

    Directory of Open Access Journals (Sweden)

    Lars Rönnegård

    2003-04-01

    Full Text Available The objective of the paper was to investigate annual genetic gain from selection (G, and the influence of selection on the inbreeding effective population size (Ne, for different possible breeding schemes within a reindeer herding district. The breeding schemes were analysed for different proportions of the population within a herding district included in the selection programme. Two different breeding schemes were analysed: an open nucleus scheme where males mix and mate between owner flocks, and a closed nucleus scheme where the males in non-selected owner flocks are culled to maximise G in the whole population. The theory of expected long-term genetic contributions was used and maternal effects were included in the analyses. Realistic parameter values were used for the population, modelled with 5000 reindeer in the population and a sex ratio of 14 adult females per male. The standard deviation of calf weights was 4.1 kg. Four different situations were explored and the results showed: 1. When the population was randomly culled, Ne equalled 2400. 2. When the whole population was selected on calf weights, Ne equalled 1700 and the total annual genetic gain (direct + maternal in calf weight was 0.42 kg. 3. For the open nucleus scheme, G increased monotonically from 0 to 0.42 kg as the proportion of the population included in the selection programme increased from 0 to 1.0, and Ne decreased correspondingly from 2400 to 1700. 4. In the closed nucleus scheme the lowest value of Ne was 1300. For a given proportion of the population included in the selection programme, the difference in G between a closed nucleus scheme and an open one was up to 0.13 kg. We conclude that for mass selection based on calf weights in herding districts with 2000 animals or more, there are no risks of inbreeding effects caused by selection.

  6. A Brief Introduction of Task-based Approach

    Institute of Scientific and Technical Information of China (English)

    王丹

    2012-01-01

    The task-based language teaching approach is one of the syllabus models that have been proposed in the last twenty years or so. Task-based syllabus represent a particular realization of communicative language teaching. Task-based teaching/learning helps develop students’ communicative competence, enabling them to communicate effectively in real communicating world and engage in interaction. The most active element in the process of the task-based teaching is the learner’ creativity. By exploiting this kind of creativity, learning can be made significantly more efficient and more interesting. It is well-known that the task-based teaching/learning have a rich potential for promoting successful second language learning than the traditional teaching/learning. Task-based approach is reflected not only in China but also in some other countries, such as America, Canada, Singapore, Hong Kong and son on.

  7. Mutation breeding in peas

    International Nuclear Information System (INIS)

    The pea as an ancient crop plant still today has wide uses and is an import source of food protein. It is also an important object for genetic studies and as such has been widely used in mutation induction experiments. However, in comparison with cereals this ancient crop plant (like several other grain legumes) has gained relatively little from advances in breeding. The review focuses on the prospects of genetic improvement of pea by induced mutations, discusses principles and gives methodological information. (author)

  8. Analysis of Kernel Approach in Fuzzy-Based Image Classifications

    Directory of Open Access Journals (Sweden)

    Mragank Singhal

    2013-03-01

    Full Text Available This paper presents a framework of kernel approach in the field of fuzzy based image classification in remote sensing. The goal of image classification is to separate images according to their visual content into two or more disjoint classes. Fuzzy logic is relatively young theory. Major advantage of this theory is that it allows the natural description, in linguistic terms, of problems that should be solved rather than in terms of relationships between precise numerical values. This paper describes how remote sensing data with uncertainty are handled with fuzzy based classification using Kernel approach for land use/land cover maps generation. The introduction to fuzzification using Kernel approach provides the basis for the development of more robust approaches to the remote sensing classification problem. The kernel explicitly defines a similarity measure between two samples and implicitly represents the mapping of the input space to the feature space.

  9. Image-Based Learning Approach Applied to Time Series Forecasting

    OpenAIRE

    J. C. Chimal-Eguía; K. Ramírez-Amáro

    2012-01-01

    In this paper, a new learning approach based on time-series image information is presented. In order to implementthis new learning technique, a novel time-series input data representation is also defined. This input data representation is based on information obtained by image axis division into boxes. The difference between this new input data representation and the classical is that this technique is not time-dependent. This new information is implemented in the new Image-Based Learning A...

  10. Intelligent Flowcharting Developmental Approach to Legal Knowledge Based System

    OpenAIRE

    Nitin Balaji Bilgi; Kulkarni, R. V.

    2011-01-01

    The basic aim of this research, described in this paper is to develop a hybrid legal expert system/ knowledge based system, with specific reference to the transfer of property act, within the Indian legal system which is often in demand. In this paper the authors discuss an traditional approach to combining two types of reasoning methodologies, Rule Based Reasoning (RBR) and Case Based Reasoning (CBR). In RBR module we have interpreted and implemented rules that occur in legal statutes of the...

  11. Biomarker Discovery by Novel Sensors Based on Nanoproteomics Approaches

    Directory of Open Access Journals (Sweden)

    Manuel Fuentes

    2012-02-01

    Full Text Available During the last years, proteomics has facilitated biomarker discovery by coupling high-throughput techniques with novel nanosensors. In the present review, we focus on the study of label-based and label-free detection systems, as well as nanotechnology approaches, indicating their advantages and applications in biomarker discovery. In addition, several disease biomarkers are shown in order to display the clinical importance of the improvement of sensitivity and selectivity by using nanoproteomics approaches as novel sensors.

  12. An Eavesdropping Detecting Approach Based on Mode-Mode Correlation

    Institute of Scientific and Technical Information of China (English)

    XIONG Jin; ZENG Gui-Hua; ZHOU Nan-Run

    2005-01-01

    @@ We find that second-order coherence as well as a Hanbury-Brown-Twiss intensity interferometer may provide an optimal approach for eavesdropping detection in the quantum key distribution based on two-mode squeezed'vacuum states. With this approach, eavesdropping can be easily detected without sacrificing extra secret bits as the test key. In addition, the efficiency of the quantum key distribution protocol is enhanced greatly.

  13. RESEARCH ON NEGOTIATION-BASED PARTNER SELECTION APPROACH

    Institute of Scientific and Technical Information of China (English)

    2002-01-01

    The key problem in the construction of virtual enterprises (VEs) is how to select appropriate partners. The negotiation-based approach is proposed to support partner selection in the construction of VEs . The negotiation model is discussed from three main aspects respectively, i.e., negotiation protocol, negotiation goal and negotiation decision-making model. And the generic mathematical description of the negotiation model is formally presented. Finally, a simple example is used to validate the approach's availability.

  14. An approach towards problem-based learning in virtual space

    OpenAIRE

    Freudenberg, Lutz S.; Bockisch, Andreas; Beyer, Thomas

    2010-01-01

    Problem-based learning (PBL) is an established and efficient approach to sustainable teaching. Here, we describe translation of PBL into the virtual classroom thereby offering novel teaching aspects in the field of Nuclear Medicine. Our teaching approach is implemented on a "moodle" platform and consists of 2 modules: complementary seminar teaching materials and a virtual PBL-classroom, which can be attended via Skype. Over the course of 4 semesters 539 students have accessed our teaching pla...

  15. A Moving Human Tracking Approach Based on Semantic Interaction

    Institute of Scientific and Technical Information of China (English)

    ZHOU Ning; FANG Bao-hong; SUN Fu-liang

    2007-01-01

    In order to deal with partical occlusion, a semantic interaction based moving human tracking approach is put forward. Firstly human is modeled as moving blobs which are described as blob descriptions. Then moving blobs are updated and verified by projecting these descriptions. The approach exploits improved fast gauss transform and chooses source and target samples to reduce compute cost. Multi-moving human can be tracked simply and part occlusion can be done well.

  16. LMI Approach to Observer-based FD Systems Designing

    Institute of Scientific and Technical Information of China (English)

    钟麦英; 汤兵勇; 丁·史蒂芬·先春

    2001-01-01

    Increasing the robustness to the unknown uncertainty and simultaneously enhancing the sensibility to the faults is one of the important issues considered in the fault detection development. Considering the L2-gain of residual system, this paper deals the observer-based fault detection problem. By using of H∞ control theory,an LMI approach to design fault detection observer is given. A numerical example is used to illustrate the effectiveness of the proposed approach.

  17. A New Classification Approach Based on Multiple Classification Rules

    OpenAIRE

    Zhongmei Zhou

    2014-01-01

    A good classifier can correctly predict new data for which the class label is unknown, so it is important to construct a high accuracy classifier. Hence, classification techniques are much useful in ubiquitous computing. Associative classification achieves higher classification accuracy than some traditional rule-based classification approaches. However, the approach also has two major deficiencies. First, it generates a very large number of association classification rules, especially when t...

  18. MARKER ASSISTED SELECTION IN DISEASE RESISTANCE BREEDING

    Directory of Open Access Journals (Sweden)

    Narasimhulu Ragimekula

    2013-08-01

    Full Text Available Feeding ever-increasing population is the main challenge faced by the agricultural scientists and to meet this plant breeders have to put continuous efforts to develop new crop varieties on fast track basis. DNA based polymorphism, commonly known as DNA markers can be used for genetic improvement through selection for favourable traits such as disease resistance. Molecular markers are becoming an essential component in backcross breeding programs for tracking the resistance genes in gene pyramiding. Marker assisted selection (MAS, is expected to increase genetic response by affecting efficiency and accuracy of selection. Even though marker-assisted selection now plays a prominent role in the field of plant breeding, examples of successful, practical outcomes are rare. MAS, with few exceptions, has not yet delivered its expected benefits in commercial breeding. It is clear that DNA markers hold great promise, but realizing that promise remains elusive. The economic and biological constraints such as a low return of investment in small-grain cereal breeding, lack of diagnostic markers, and the prevalence of QTL-background effects hinder the broad implementation of MAS. Until complex traits can be fully dissected, the application of MAS will be limited to genes of moderate-to-large effect and to applications that do not endanger the response to conventional selection. Till then, observable phenotype will remain an important component of genetic improvement programmes, because it takes in to account the collective effect of all genes. In future, chip-based, high-throughput genotyping platforms and the introduction of genomic selection will reduce the current problems of integrating MAS in practical breeding programs and open new avenues for a molecular-based resistance breeding.

  19. A Variance Based Active Learning Approach for Named Entity Recognition

    Science.gov (United States)

    Hassanzadeh, Hamed; Keyvanpour, Mohammadreza

    The cost of manually annotating corpora is one of the significant issues in many text based tasks such as text mining, semantic annotation and generally information extraction. Active Learning is an approach that deals with reduction of labeling costs. In this paper we proposed an effective active learning approach based on minimal variance that reduces manual annotation cost by using a small number of manually labeled examples. In our approach we use a confidence measure based on the model's variance that reaches a considerable accuracy for annotating entities. Conditional Random Field (CRF) is chosen as the underlying learning model due to its promising performance in many sequence labeling tasks. The experiments show that the proposed method needs considerably fewer manual labeled samples to produce a desirable result.

  20. An Open Science Approach to Gis-Based Paleoenvironment Data

    Science.gov (United States)

    Willmes, C.; Becker, D.; Verheul, J.; Yener, Y.; Zickel, M.; Bolten, A.; Bubenzer, O.; Bareth, G.

    2016-06-01

    Paleoenvironmental studies and according information (data) are abundantly published and available in the scientific record. However, GIS-based paleoenvironmental information and datasets are comparably rare. Here, we present an Open Science approach for creating GIS-based data and maps of paleoenvironments, and Open Access publishing them in a web based Spatial Data Infrastructure (SDI), for access by the archaeology and paleoenvironment communities. We introduce an approach to gather and create GIS datasets from published non-GIS based facts and information (data), such as analogous maps, textual information or figures in scientific publications. These collected and created geo-datasets and maps are then published, including a Digital Object Identifier (DOI) to facilitate scholarly reuse and citation of the data, in a web based Open Access Research Data Management Infrastructure. The geo-datasets are additionally published in an Open Geospatial Consortium (OGC) standards compliant SDI, and available for GIS integration via OGC Open Web Services (OWS).

  1. A cloud model-based approach for water quality assessment.

    Science.gov (United States)

    Wang, Dong; Liu, Dengfeng; Ding, Hao; Singh, Vijay P; Wang, Yuankun; Zeng, Xiankui; Wu, Jichun; Wang, Lachun

    2016-07-01

    Water quality assessment entails essentially a multi-criteria decision-making process accounting for qualitative and quantitative uncertainties and their transformation. Considering uncertainties of randomness and fuzziness in water quality evaluation, a cloud model-based assessment approach is proposed. The cognitive cloud model, derived from information science, can realize the transformation between qualitative concept and quantitative data, based on probability and statistics and fuzzy set theory. When applying the cloud model to practical assessment, three technical issues are considered before the development of a complete cloud model-based approach: (1) bilateral boundary formula with nonlinear boundary regression for parameter estimation, (2) hybrid entropy-analytic hierarchy process technique for calculation of weights, and (3) mean of repeated simulations for determining the degree of final certainty. The cloud model-based approach is tested by evaluating the eutrophication status of 12 typical lakes and reservoirs in China and comparing with other four methods, which are Scoring Index method, Variable Fuzzy Sets method, Hybrid Fuzzy and Optimal model, and Neural Networks method. The proposed approach yields information concerning membership for each water quality status which leads to the final status. The approach is found to be representative of other alternative methods and accurate. PMID:26995351

  2. A Market-Based Approach to Multi-factory Scheduling

    Science.gov (United States)

    Vytelingum, Perukrishnen; Rogers, Alex; MacBeth, Douglas K.; Dutta, Partha; Stranjak, Armin; Jennings, Nicholas R.

    In this paper, we report on the design of a novel market-based approach for decentralised scheduling across multiple factories. Specifically, because of the limitations of scheduling in a centralised manner - which requires a center to have complete and perfect information for optimality and the truthful revelation of potentially commercially private preferences to that center - we advocate an informationally decentralised approach that is both agile and dynamic. In particular, this work adopts a market-based approach for decentralised scheduling by considering the different stakeholders representing different factories as self-interested, profit-motivated economic agents that trade resources for the scheduling of jobs. The overall schedule of these jobs is then an emergent behaviour of the strategic interaction of these trading agents bidding for resources in a market based on limited information and their own preferences. Using a simple (zero-intelligence) bidding strategy, we empirically demonstrate that our market-based approach achieves a lower bound efficiency of 84%. This represents a trade-off between a reasonable level of efficiency (compared to a centralised approach) and the desirable benefits of a decentralised solution.

  3. A cloud model-based approach for water quality assessment.

    Science.gov (United States)

    Wang, Dong; Liu, Dengfeng; Ding, Hao; Singh, Vijay P; Wang, Yuankun; Zeng, Xiankui; Wu, Jichun; Wang, Lachun

    2016-07-01

    Water quality assessment entails essentially a multi-criteria decision-making process accounting for qualitative and quantitative uncertainties and their transformation. Considering uncertainties of randomness and fuzziness in water quality evaluation, a cloud model-based assessment approach is proposed. The cognitive cloud model, derived from information science, can realize the transformation between qualitative concept and quantitative data, based on probability and statistics and fuzzy set theory. When applying the cloud model to practical assessment, three technical issues are considered before the development of a complete cloud model-based approach: (1) bilateral boundary formula with nonlinear boundary regression for parameter estimation, (2) hybrid entropy-analytic hierarchy process technique for calculation of weights, and (3) mean of repeated simulations for determining the degree of final certainty. The cloud model-based approach is tested by evaluating the eutrophication status of 12 typical lakes and reservoirs in China and comparing with other four methods, which are Scoring Index method, Variable Fuzzy Sets method, Hybrid Fuzzy and Optimal model, and Neural Networks method. The proposed approach yields information concerning membership for each water quality status which leads to the final status. The approach is found to be representative of other alternative methods and accurate.

  4. Measuring approaches to learning in a problem based learning context

    Directory of Open Access Journals (Sweden)

    Diana H. Dolmans

    2010-07-01

    Full Text Available Objectives: Students in Problem-Based Learning (PBL are assumed to adopt a deep learning approach and not a surface approach. This study investigated: 1 the reliability and validity of version of the Revised Study Process Questionnaire adapted to the PBL context (PBL-R-SPQ and 2 the extent to which PBL students use deep or surface approaches, and whether this differs between first and second year students. Methods: The items of the R-SPQ were reformulated to better fit with a PBL environment, resulting in the PBL-R-SPQ. In total 262 students from MaastrichtMedicalSchool responded to the PBL-R-SPQ. Results: A Confirmatory Factor Analysis (CFA demon-strated that a 9-item Deep Approach scale and a 9-item Surface Approach scale fitted the observed set of data well. Cronbach alphas for the Deep and Surface scales were 0.76 and 0.74, respectively. First year students reported signifi cantly higher Deep Approach scores (M = 3.60, SD = .48 than second year students (M = 3.40, SD = .48 (p = .001, d = .42. Conversely, second year students reported signifi-cantly higher Surface Approach scores, (M = 2.45, SD = .48 than first year students (M = 2.26, SD = .52 (p = .003, d = .38. Conclusions: The 18-item PBL-R-SPQ provides a valid and reliable tool to measure students' learning approach in PBL. In addition, PBL students tended to adopt a deep approach rather than a surface approach, which is in line with the assumptions behind PBL, although the second year students have a somewhat less deep approach than the first year students.

  5. Developing a typology for local cattle breed farmers in Europe

    NARCIS (Netherlands)

    Soini, K.; Diaz, C.; Gandini, G.; Haas, de Y.; Lilja, T.; Martin-Collado, D.; Pizzi, F.; Hiemstra, S.J.

    2012-01-01

    Recognizing cultural diversity among local breed farmers is crucial for the successful development and implementation of farm animal genetic resources FAnGr conservation policies and programmes. In this study based on survey data collected in the EUropean REgional CAttle breeds project from six Euro

  6. Ellipse Fitting Based Approach for Extended Object Tracking

    Directory of Open Access Journals (Sweden)

    Borui Li

    2014-01-01

    Full Text Available With the increase of sensors’ resolution, traditional object tracking technology, which ignores object’s physical extension, gradually becomes inappropriate. Extended object tracking (EOT technology is able to obtain more information about the object through jointly estimating both centroid’s dynamic state and physical extension of the object. Random matrix based approach is a promising method for EOT. It uses ellipse/ellipsoid to describe the physical extension of the object. In order to reduce the physical extension estimation error when object maneuvers, the relationship between ellipse/ellipsoid and symmetrical positive definite matrix is analyzed at first. On this basis, ellipse/ellipsoid fitting based approach (EFA for EOT is proposed based on the measurement model and centroid’s dynamic model of random matrix based EOT approach. Simulation results show that EFA is effective. The physical extension estimation error of EFA is lower than those of random matrix based approaches when object maneuvers. Besides, the estimation error of centroid’s dynamic state of EFA is also lower.

  7. Breeding programs for smallholder sheep farming systems: I. Evaluation of alternative designs of breeding schemes

    NARCIS (Netherlands)

    Gizaw, S.; Rischkowsky, B.; Valle-Zárate, A.; Haile, A.; Arendonk, van J.A.M.; Mwai, O.; Dessie, T.

    2014-01-01

    Village- and central nucleus-based schemes were simulated and evaluated for their relative bio-economic efficiencies, using Ethiopia's Menz sheep as example. The schemes were: village-based 2-tier (Scheme-1) and 1-tier (Scheme-2) cooperative village breeding schemes, dispersed village-based nuclei s

  8. Addition of a breeding database in the Genome Database for Rosaceae

    OpenAIRE

    Evans, Kate; Jung, Sook; Lee, Taein; Brutcher, Lisa; Cho, Ilhyung; Peace, Cameron; Main, Dorrie

    2013-01-01

    Breeding programs produce large datasets that require efficient management systems to keep track of performance, pedigree, geographical and image-based data. With the development of DNA-based screening technologies, more breeding programs perform genotyping in addition to phenotyping for performance evaluation. The integration of breeding data with other genomic and genetic data is instrumental for the refinement of marker-assisted breeding tools, enhances genetic understanding of important c...

  9. Evaluation of charge breeding options for EURISOL

    CERN Document Server

    Delahaye, P; Lamy, T; Marie-Jeanne, M; Kester, O; Wenander, F

    2010-01-01

    A comprehensive study of charge breeding techniques for the most ambitious ISOL-facility project, EURISOL, is presented here. It is based on results obtained during the past years at CERN-ISOLDE and LPSC Grenoble with charge breeders of both ECR and EBIS types.

  10. The Process - based Approach in English Writing Class%The Process-based Approach in English Writing Class

    Institute of Scientific and Technical Information of China (English)

    秦梅

    2007-01-01

    English writing is gaining high attention and emphasis in our college syllabus. It is a complicated process of written communication. In the process, the four basic skills-speaking, reading, listening and writing are organically integrated together. This paper is about the processbased approach in English writing class and its aim to emphasize the importance of process -based approach to writing. There are four parts in this paper. I start with a brief introduction to the importance of writing. Next, I will introduce my practice in English writing class. Then I will comment on the process approach and then make a little revision.

  11. Intelligent Transportation and Evacuation Planning A Modeling-Based Approach

    CERN Document Server

    Naser, Arab

    2012-01-01

    Intelligent Transportation and Evacuation Planning: A Modeling-Based Approach provides a new paradigm for evacuation planning strategies and techniques. Recently, evacuation planning and modeling have increasingly attracted interest among researchers as well as government officials. This interest stems from the recent catastrophic hurricanes and weather-related events that occurred in the southeastern United States (Hurricane Katrina and Rita). The evacuation methods that were in place before and during the hurricanes did not work well and resulted in thousands of deaths. This book offers insights into the methods and techniques that allow for implementing mathematical-based, simulation-based, and integrated optimization and simulation-based engineering approaches for evacuation planning. This book also: Comprehensively discusses the application of mathematical models for evacuation and intelligent transportation modeling Covers advanced methodologies in evacuation modeling and planning Discusses principles a...

  12. User-based and Cognitive Approaches to Knowledge Organization

    DEFF Research Database (Denmark)

    Hjørland, Birger

    2013-01-01

    In the 1970s and 1980s, forms of user-based and cognitive approaches to knowledge organization came to the forefront as part of the overall development in library and information science and in the broader society. The specific nature of userbased approaches is their basis in the empirical studies...... of users or the principle that users need to be involved in the construction of knowledge organization systems. It might seem obvious that user-friendly systems should be designed on user studies or user involvement, but extremely successful systems such as Apple’s iPhone, Dialog’s search system and Google......’s PageRank are not based on the empirical studies of users. In knowledge organization, the Book House System is one example of a system based on user studies. In cognitive science the important WordNet database is claimed to be based on psychological research. This article considers such examples...

  13. Ant Colony Based Approach for Solving FPGA routing

    Directory of Open Access Journals (Sweden)

    Vinay Chopra

    2011-07-01

    Full Text Available This paper is based on an ant colony optimization algorithm (ASDR for solving FPGA routing for a route based routing constraint model in FPGA design architecture. In this approach FPGA routing task is transformed into a Boolean Satisfiabilty (SAT equation with the property that any assignment of input variables that satisfies the equation specifies a valid route. The Satisfiability equation is then modeled as Constraint Satisfaction problem, which helps in reducing procedural programming. Satisfying assignment for particular route will result in a valid routing and absence of a satisfying assignment implies that the layout is unroutable. In second step ant colony optimization algorithm is applied on the Boolean equation for solving routing alternatives utilizing approach of hard combinatorial optimization problems. The experimental results suggest that the developed ant colony optimization algorithm based router has taken extremely short CPU time as compared to classical Satisfiabilty based detailed router (SDR and finds all possible routes even for large FPGA circuits.

  14. Diffraction tomography on curved boundaries: A projection-based approach

    CERN Document Server

    Clement, G T

    2013-01-01

    An approach to diffraction tomography is investigated for two-dimensional image reconstruction of objects surrounded by an arbitrarily-shaped curve of sources and receivers. Based on the integral theorem of Helmholtz and Kirchhoff, the approach relies upon a valid choice of the Green's functions for selected conditions along the (possibly-irregular) boundary. This allows field projections from the receivers to an arbitrary external location. When performed over all source locations, it will be shown that the field caused by a hypothetical source at this external location is also known along the boundary. This field can then be projected to new external points that may serve as a virtual receiver. Under such a reformation, data may be put in a form suitable for image construction by synthetic aperture methods. Foundations of the approach are shown, followed by a mapping technique optimized for the approach. Examples formed from synthetic data are provided.

  15. A New ETL Approach Based on Data Virtualization

    Institute of Scientific and Technical Information of China (English)

    郭树盛; 袁子牧; 孙傲冰; 岳强

    2015-01-01

    ETL (Extract-Transform-Load) usually includes three phases: extraction, transformation, and loading. In building data warehouse, it plays the role of data injection and is the most time-consuming activity. Thus it is necessary to improve the performance of ETL. In this paper, a new ETL approach, TEL (Transform-Extract-Load) is proposed. The TEL approach applies virtual tables to realize the transformation stage before extraction stage and loading stage, without data staging area or staging database which stores raw data extracted from each of the disparate source data systems. The TEL approach reduces the data transmission load, and improves the performance of query from access layers. Experimental results based on our proposed benchmarks show that the TEL approach is feasible and practical.

  16. Signatures of diversifying selection in European pig breeds.

    Directory of Open Access Journals (Sweden)

    Samantha Wilkinson

    2013-04-01

    Full Text Available Following domestication, livestock breeds have experienced intense selection pressures for the development of desirable traits. This has resulted in a large diversity of breeds that display variation in many phenotypic traits, such as coat colour, muscle composition, early maturity, growth rate, body size, reproduction, and behaviour. To better understand the relationship between genomic composition and phenotypic diversity arising from breed development, the genomes of 13 traditional and commercial European pig breeds were scanned for signatures of diversifying selection using the Porcine60K SNP chip, applying a between-population (differentiation approach. Signatures of diversifying selection between breeds were found in genomic regions associated with traits related to breed standard criteria, such as coat colour and ear morphology. Amino acid differences in the EDNRB gene appear to be associated with one of these signatures, and variation in the KITLG gene may be associated with another. Other selection signals were found in genomic regions including QTLs and genes associated with production traits such as reproduction, growth, and fat deposition. Some selection signatures were associated with regions showing evidence of introgression from Asian breeds. When the European breeds were compared with wild boar, genomic regions with high levels of differentiation harboured genes related to bone formation, growth, and fat deposition.

  17. Scattered Data Processing Approach Based on Optical Facial Motion Capture

    OpenAIRE

    Qiang Zhang; Xiaoying Liang; Xiaopeng Wei

    2013-01-01

    In recent years, animation reconstruction of facial expressions has become a popular research field in computer science and motion capture-based facial expression reconstruction is now emerging in this field. Based on the facial motion data obtained using a passive optical motion capture system, we propose a scattered data processing approach, which aims to solve the common problems of missing data and noise. To recover missing data, given the nonlinear relationships among neighbors with the ...

  18. A genetic programming based business process mining approach

    OpenAIRE

    Turner, Christopher James

    2009-01-01

    As business processes become ever more complex there is a need for companies to understand the processes they already have in place. To undertake this manually would be time consuming. The practice of process mining attempts to automatically construct the correct representation of a process based on a set of process execution logs. The aim of this research is to develop a genetic programming based approach for business process mining. The focus of this research is on automated/semi automat...

  19. Integration Issues of an Ontology based Context Modelling Approach

    OpenAIRE

    Strang, Thomas; Linnhoff-Popien, Claudia; Frank, Korbinian

    2003-01-01

    In this paper we analyse the applicability of our ontology based context modelling approach, considering a range of use cases. After wrapping up the model and the Context Ontology Language (CoOL) derived from it, we introduce some interesting applications of the language, based on a scenario showing the challenges in context aware service interactions. We focus on two submodels of our model for context aware service interactions, namely Context Bindings and Context Obligations, and demonstrat...

  20. A Mindfulness-Based Approach to the Treatment of Insomnia

    OpenAIRE

    Ong, Jason; Sholtes, David

    2010-01-01

    Mindfulness meditation has emerged as a novel approach to emotion regulation and stress reduction that has several health benefits. Preliminary work has been conducted on mindfulness-based therapy for insomnia (MBT-I), a meditation-based program for individuals suffering from chronic sleep disturbance. This treatment integrates behavioral treatments for insomnia with the principles and practices of mindfulness meditation. A case illustration of a chronic insomnia sufferer demonstrates the app...

  1. A Learning Object Approach To Evidence based learning

    OpenAIRE

    Zabin Visram; Bruce Elson; Patricia Reynolds

    2005-01-01

    This paper describes the philosophy, development and framework of the body of elements formulated to provide an approach to evidence-based learning sustained by Learning Objects and web based technology Due to the demands for continuous improvement in the delivery of healthcare and in the continuous endeavour to improve the quality of life, there is a continuous need for practitioner's to update their knowledge by accomplishing accredited courses. The rapid advances in medical science has mea...

  2. Face Recognition Approach Based on Wavelet - Curvelet Technique

    Directory of Open Access Journals (Sweden)

    Muzhir Shaban Al-Ani

    2012-04-01

    Full Text Available In this paper, a novel face recognition approach based on wavelet-curvelet technique, is proposed. This algorithm based on the similarities embedded in the images, That utilize the wavelet-curvelet technique to extract facial features. The implemented technique can overcome on the other mathematical image analysis approaches. This approaches may suffered from the potential for a high dimensional feature space, Therefore it aims to reduce the dimensionality that reduce the required computational power and memory size. Then the Nearest Mean Classifier (NMC is adopted to recognize different faces. In this work, three major experiments were done. two face databases (MAFD & ORL, and higher recognition rate is obtained by the implementation of this techniques.

  3. An Evidence-Based Approach to Introductory Chemistry

    Science.gov (United States)

    Johnson, Philip

    2014-01-01

    Drawing on research into students' understanding, this article argues that the customary approach to introductory chemistry has created difficulties for students. Instead of being based on the notion of "solids, liquids and gases", introductory chemistry should be structured to develop the concept of a substance. The concept of a…

  4. An Approach to Quality Estimation in Model-Based Development

    DEFF Research Database (Denmark)

    Holmegaard, Jens Peter; Koch, Peter; Ravn, Anders Peter

    2004-01-01

    We present an approach to estimation of parameters for design space exploration in Model-Based Development, where synthesis of a system is done in two stages. Component qualities like space, execution time or power consumption are defined in a repository by platform dependent values. Connectors...

  5. Agile Service Development: A Rule-Based Method Engineering Approach

    NARCIS (Netherlands)

    Hoppenbrouwers, Stijn; Zoet, Martijn; Versendaal, Johan; Weerd, Inge van de

    2011-01-01

    Agile software development has evolved into an increasingly mature software development approach and has been applied successfully in many software vendors’ development departments. In this position paper, we address the broader agile service development. Based on method engineering principles we de

  6. An approach for activity-based DEVS model specification

    DEFF Research Database (Denmark)

    Alshareef, Abdurrahman; Sarjoughian, Hessam S.; Zarrin, Bahram

    2016-01-01

    activity-based behavior modeling of parallel DEVS atomic models. We consider UML activities and actions as fundamental units of behavior modeling, especially in the presence of recent advances in the UML 2.5 specifications. We describe in detail how to approach activity modeling with a set of elemental...

  7. Saccharide-based Approach to Green Metallic Nanostructure Synthesis

    DEFF Research Database (Denmark)

    Engelbrekt, Christian; Sørensen, Karsten Holm; Jensen, Palle Skovhus;

    A green approach to solution synthesis of metallic nanoparticles has been developed using harmless and bioapplicable chemicals as well as moderate temperatures. Metal precursors are reduced by glucose/buffers and sterically stabilized by starch. The saccharide based procedure is highly diverse pr...

  8. From Equation to Inequality Using a Function-Based Approach

    Science.gov (United States)

    Verikios, Petros; Farmaki, Vassiliki

    2010-01-01

    This article presents features of a qualitative research study concerning the teaching and learning of school algebra using a function-based approach in a grade 8 class, of 23 students, in 26 lessons, in a state school of Athens, in the school year 2003-2004. In this article, we are interested in the inequality concept and our aim is to…

  9. A Genre-Based Approach to Teaching EFL Summary Writing

    Science.gov (United States)

    Chen, Yuan-Shan; Su, Shao-Wen

    2012-01-01

    This study utilizes a pre-test/post-test assessment to investigate the instructional efficacy of a genre-based approach to teaching summary writing. Forty-one EFL university students in Taiwan were asked before and after the instruction to summarize a simplified version of The Adventures of Tom Sawyer in a maximum of 500 words. All the students'…

  10. Non-frontal model based approach to forensic face recognition

    NARCIS (Netherlands)

    Dutta, Abhishek; Veldhuis, Raymond; Spreeuwers, Luuk

    2012-01-01

    In this paper, we propose a non-frontal model based approach which ensures that a face recognition system always gets to compare images having similar view (or pose). This requires a virtual suspect reference set that consists of non-frontal suspect images having pose similar to the surveillance vie

  11. Graphene metamaterials based tunable terahertz absorber: effective surface conductivity approach

    DEFF Research Database (Denmark)

    Andryieuski, Andrei; Lavrinenko, Andrei

    2013-01-01

    In this paper we present the efficient design of functional thin-film metamaterial devices with the effective surface conductivity approach. As an example, we demonstrate a graphene based perfect absorber. After formulating the requirements to the perfect absorber in terms of surface conductivity...... we investigate the properties of graphene wire medium and graphene fishnet metamaterials and demonstrate both narrowband and broadband tunable absorbers....

  12. Content Based Image Retrieval and Information Theory: A General Approach.

    Science.gov (United States)

    Zachary, John; Iyengar, S. S.; Barhen, Jacob

    2001-01-01

    Proposes an alternative real valued representation of color based on the information theoretic concept of entropy. A theoretical presentation of image entropy is accompanied by a practical description of the merits and limitations of image entropy compared to color histograms. Results suggest that image entropy is a promising approach to image…

  13. A sampling-based approach to probabilistic pursuit evasion

    KAUST Repository

    Mahadevan, Aditya

    2012-05-01

    Probabilistic roadmaps (PRMs) are a sampling-based approach to motion-planning that encodes feasible paths through the environment using a graph created from a subset of valid positions. Prior research has shown that PRMs can be augmented with useful information to model interesting scenarios related to multi-agent interaction and coordination. © 2012 IEEE.

  14. CAGE BREEDING OF WARM WATER FRESHWATER FISH SPECIES

    Directory of Open Access Journals (Sweden)

    Roman Safner

    2008-10-01

    Full Text Available In the 1970s, Croatia became actively involved in the contemporary trend of breeding fish in floating cages. In addition to various species of marine fishes, breeding was attempted with trout, carp, catfish, cisco and salmon. Of the above freshwater fish species, specific standards were established only for the cage breeding of rainbow trout. Cage breeding of the remaining species remained at the level of occasional attempts, with more of an experimental than a commercial character. The regular attempts to master this technique for cage breeding of warm water freshwater fish species were aimed at achieving the known benefits of such breeding, such as simplicity of implementing technological measures, easier establishment of the breeding system, simpler manipulation, the possibility of denser colonies per unit volume with a high level of production, easier adaptations to market conditions and fewer initial structural investments. Despite the many advantages, the main reasons for the lack of greater implementation of the cage breeding technology for warm water species of freshwater fish include problems in obtaining the appropriate category and quantity of healthy fry, the specificity and applicability of physical and chemical properties of the recipients and human error. In evaluating the advantages and disadvantages, the final decision on the justification of cage breeding for individual warm water freshwater species must be based on both biological and economic factors. Based on the knowledge of cage breeding acquired to date, the rule for virtually all intensive breeding systems is that it is only recommended for those species with high market demand and a high market price. The technology that demands nutrition with highly concentrated feed and other production expenditures is costly, and is therefore not profitable with less expensive fish species. Furthermore, production must be market oriented, i.e. the appropriate market research measures

  15. Breeding tropical forages

    Directory of Open Access Journals (Sweden)

    L Jank

    2011-01-01

    Full Text Available Brazil has the largest commercial beef cattle herd and is the main beef exporter in the world. Cultivated pastures arethe basis for the Brazilian beef production, and occupy an area of 101.4 million hectares. However, very few forage cultivars arecommercially available, and the majority of these are of apomictic reproduction, thus genetically homogeneous. Tropical foragebreeding is at its infancy, but much investment and efforts have been applied in the last three decades and some new cultivars havebeen released. In this paper, origin of different species, modes of reproduction, breeding programs and targets are discussed andthe resulting new cultivars released are presented.

  16. Variation-based approach to image segmentation Variation-based approach to image segmentation

    Institute of Scientific and Technical Information of China (English)

    张永平; 郑南宁; 赵荣椿

    2001-01-01

    A new approach to image segmentation is presented using a variation framework. Regarding the edge points as interpolating points and minimizing an energy functional to interpolate a smooth threshold surface it carries out the image segmentation. In order to preserve the edge information of the original image in the threshold surface, without unduly sharping the edge of the image, a non-convex energy functional is adopted. A relaxation algorithm with the property of global convergence, for solving the optimization problem, is proposed by introducing a binary energy. As a result the non-convex optimization problem is transformed into a series of convex optimization problems, and the problem of slow convergence or nonconvergence is solved. The presented method is also tested experimentally. Finally the method of determining the parameters in optimizing is also explored.   

  17. An Efficient Soft Set-Based Approach for Conflict Analysis.

    Directory of Open Access Journals (Sweden)

    Edi Sutoyo

    Full Text Available Conflict analysis has been used as an important tool in economic, business, governmental and political dispute, games, management negotiations, military operations and etc. There are many mathematical formal models have been proposed to handle conflict situations and one of the most popular is rough set theory. With the ability to handle vagueness from the conflict data set, rough set theory has been successfully used. However, computational time is still an issue when determining the certainty, coverage, and strength of conflict situations. In this paper, we present an alternative approach to handle conflict situations, based on some ideas using soft set theory. The novelty of the proposed approach is that, unlike in rough set theory that uses decision rules, it is based on the concept of co-occurrence of parameters in soft set theory. We illustrate the proposed approach by means of a tutorial example of voting analysis in conflict situations. Furthermore, we elaborate the proposed approach on real world dataset of political conflict in Indonesian Parliament. We show that, the proposed approach achieves lower computational time as compared to rough set theory of up to 3.9%.

  18. An Efficient Soft Set-Based Approach for Conflict Analysis

    Science.gov (United States)

    Sutoyo, Edi; Mungad, Mungad; Hamid, Suraya; Herawan, Tutut

    2016-01-01

    Conflict analysis has been used as an important tool in economic, business, governmental and political dispute, games, management negotiations, military operations and etc. There are many mathematical formal models have been proposed to handle conflict situations and one of the most popular is rough set theory. With the ability to handle vagueness from the conflict data set, rough set theory has been successfully used. However, computational time is still an issue when determining the certainty, coverage, and strength of conflict situations. In this paper, we present an alternative approach to handle conflict situations, based on some ideas using soft set theory. The novelty of the proposed approach is that, unlike in rough set theory that uses decision rules, it is based on the concept of co-occurrence of parameters in soft set theory. We illustrate the proposed approach by means of a tutorial example of voting analysis in conflict situations. Furthermore, we elaborate the proposed approach on real world dataset of political conflict in Indonesian Parliament. We show that, the proposed approach achieves lower computational time as compared to rough set theory of up to 3.9%. PMID:26928627

  19. An Efficient Soft Set-Based Approach for Conflict Analysis.

    Science.gov (United States)

    Sutoyo, Edi; Mungad, Mungad; Hamid, Suraya; Herawan, Tutut

    2016-01-01

    Conflict analysis has been used as an important tool in economic, business, governmental and political dispute, games, management negotiations, military operations and etc. There are many mathematical formal models have been proposed to handle conflict situations and one of the most popular is rough set theory. With the ability to handle vagueness from the conflict data set, rough set theory has been successfully used. However, computational time is still an issue when determining the certainty, coverage, and strength of conflict situations. In this paper, we present an alternative approach to handle conflict situations, based on some ideas using soft set theory. The novelty of the proposed approach is that, unlike in rough set theory that uses decision rules, it is based on the concept of co-occurrence of parameters in soft set theory. We illustrate the proposed approach by means of a tutorial example of voting analysis in conflict situations. Furthermore, we elaborate the proposed approach on real world dataset of political conflict in Indonesian Parliament. We show that, the proposed approach achieves lower computational time as compared to rough set theory of up to 3.9%.

  20. The cortex-based alignment approach to TMS coil positioning.

    Science.gov (United States)

    Duecker, Felix; Frost, Martin A; de Graaf, Tom A; Graewe, Britta; Jacobs, Christianne; Goebel, Rainer; Sack, Alexander T

    2014-10-01

    TMS allows noninvasive manipulation of brain activity in healthy participants and patients. The effectiveness of TMS experiments critically depends on precise TMS coil positioning, which is best for most brain areas when a frameless stereotactic system is used to target activation foci based on individual fMRI data. From a purely scientific perspective, individual fMRI-guided TMS is thus the method of choice to ensure optimal TMS efficiency. Yet, from a more practical perspective, such individual functional data are not always available, and therefore alternative TMS coil positioning approaches are often applied, for example, based on functional group data reported in Talairach coordinates. We here propose a novel method for TMS coil positioning that is based on functional group data, yet only requires individual anatomical data. We used cortex-based alignment (CBA) to transform individual anatomical data to an atlas brain that includes probabilistic group maps of two functional regions (FEF and hMT+/V5). Then, these functional group maps were back-transformed to the individual brain anatomy, preserving functional-anatomical correspondence. As a proof of principle, the resulting CBA-based functional targets in individual brain space were compared with individual FEF and hMT+/V5 hotspots as conventionally localized with individual fMRI data and with targets based on Talairach coordinates as commonly done in TMS research in case only individual anatomical data are available. The CBA-based approach significantly improved localization of functional brain areas compared with traditional Talairach-based targeting. Given the widespread availability of CBA schemes and preexisting functional group data, the proposed procedure is easy to implement and at no additional measurement costs. However, the accuracy of individual fMRI-guided TMS remains unparalleled, and the CBA-based approach should only be the method of choice when individual functional data cannot be obtained or

  1. Revising a design course from a lecture approach to a project-based learning approach

    Science.gov (United States)

    Kunberger, Tanya

    2013-06-01

    In order to develop the evaluative skills necessary for successful performance of design, a senior, Geotechnical Engineering course was revised to immerse students in the complexity of the design process utilising a project-based learning (PBL) approach to instruction. The student-centred approach stresses self-directed group learning, which focuses on the process rather than the result and underscores not only the theoretical but also the practical constraints of a problem. The shift in course emphasis, to skills over concepts, results in reduced content coverage but increased student ability to independently acquire a breadth of knowledge.

  2. Short communication: casein haplotype variability in sicilian dairy goat breeds.

    Science.gov (United States)

    Gigli, I; Maizon, D O; Riggio, V; Sardina, M T; Portolano, B

    2008-09-01

    In the Mediterranean region, goat milk production is an important economic activity. In the present study, 4 casein genes were genotyped in 5 Sicilian goat breeds to 1) identify casein haplotypes present in the Argentata dell'Etna, Girgentana, Messinese, Derivata di Siria, and Maltese goat breeds; and 2) describe the structure of the Sicilian goat breeds based on casein haplotypes and allele frequencies. In a sample of 540 dairy goats, 67 different haplotypes with frequency >or=0.01 and 27 with frequency >or=0.03 were observed. The most common CSN1S1-CSN2-CSN1S2-CSN3 haplotype for Derivata di Siria and Maltese was FCFB (0.17 and 0.22, respectively), whereas for Argentata dell'Etna, Girgentana and Messinese was ACAB (0.06, 0.23, and 0.10, respectively). According to the haplotype reconstruction, Argentata dell'Etna, Girgentana, and Messinese breeds presented the most favorable haplotype for cheese production, because the casein concentration in milk of these breeds might be greater than that in Derivata di Siria and Maltese breeds. Based on a cluster analysis, the breeds formed 2 main groups: Derivata di Siria, and Maltese in one group, and Argentata dell'Etna and Messinese in the other; the Girgentana breed was between these groups but closer to the latter.

  3. An Ontology Based Approach to Implement the Online Recommendation System

    Directory of Open Access Journals (Sweden)

    Vijayakumar Mohanraj

    2011-01-01

    Full Text Available Problem statement: Every web user has different intent when accessing the information on website. The primary goal of recommendation system is to anticipate the user intent and recommend the web pages that contain user expected information. Effective recommendation of web pages involves two important challenges: accurately identifying the user intent and predict the result show that novel web usage mining method and ontological concept scoring algorithm based on website domain ontological profile helps the recommendation system imminent navigation pattern in such a way that it provides required content while users browse the predicted navigation. Approach: We present a ontology based approach to implement recommendation system that involves applying innovative web usage mining on log system to discover all possible imminent navigation patterns of current user and resolve any uncertainties in discovering the navigation pattern by applying ontological concept based similarity comparison and scoring algorithm. Results: result show that novel web usage mining method and ontological concept scoring algorithm based on website domain ontological profile helps the recommendation system to predict and present most relevant navigation pattern to users. Conclusion: our recommendation system confirms that ontology based approach should be used to ensure excellent accuracy in predicting and capturing future navigation pattern of web user.

  4. A new approach toward object-based change detection

    Institute of Scientific and Technical Information of China (English)

    2010-01-01

    Object-based change detection has been the hotspot in remote sensing image processing.A new approach toward object-based change detection is proposed.The two different temporal images are unitedly segmented using the mean shift procedure to obtain corresponding objects.Then change detection is implemented based on the integration of corresponding objects’ intensity and texture differences.Experiments are conducted on both panchromatic images and multispectral images and the results show that the integrated measure is robust with respect to illumination changes and noise.Supplementary color detection is conducted to determine whether the color of the unchanged objects changes or not when dealing with multispectral images.Some verification work is carried out to show the accuracy of the proposed approach.

  5. Image-Based Learning Approach Applied to Time Series Forecasting

    Directory of Open Access Journals (Sweden)

    J. C. Chimal-Eguía

    2012-06-01

    Full Text Available In this paper, a new learning approach based on time-series image information is presented. In order to implementthis new learning technique, a novel time-series input data representation is also defined. This input datarepresentation is based on information obtained by image axis division into boxes. The difference between this newinput data representation and the classical is that this technique is not time-dependent. This new information isimplemented in the new Image-Based Learning Approach (IBLA and by means of a probabilistic mechanism thislearning technique is applied to the interesting problem of time series forecasting. The experimental results indicatethat by using the methodology proposed in this article, it is possible to obtain better results than with the classicaltechniques such as artificial neuronal networks and support vector machines.

  6. Mutation Breeding in Sugarcane

    International Nuclear Information System (INIS)

    The present position of sugar industry particularly cane sugar production in the world has been discussed. The role of African Countries which can contribute more than the present 11% to world cane sugar production is presented. The breeding methods employed in cane growing court-tries indicate the biparental crossing and selection in F1 has been the major method used to develop varieties. Due to cytogenetical peculiarities, thousands of seedlings are grown to select the desirable genotype. Mutations or sports has been a source of variation for selection in nature. Induced mutations have only enhanced the mutation rate and has enabled the plant breeders to get better variation for selection. Though many mutagens have been used gamma rays have been most effective. Induced mutations for nonflowering, spineless leaf-sheath, higher sugar content, yield md resistance to diseases like smut and downy mildew have been reported. The methods of making mutated tissues express itself have been indicated. Mutation breeding holds out promise in sugarcane in that the basic variety or genotype can be kept intact and a few characters changed as desired by the plant breeder provided proper selection methods are employed. (author)

  7. Radiation mutation breeding

    International Nuclear Information System (INIS)

    In order to develop an advanced technical knowledge for the selection of better mutants, some of the crops were irradiated and the mutation rate, the survival rate and the method for selction of a mutant were studied. Furthermore, this study aimed to obtain basic data applicable to the development of genetic resources by evaluation and analysis the specific character for selection of the superior mutant and its plant breeding. 1. selection of the mutant with a superior resistance against environment in the principal crops 1) New varieties of mutant rices such as Wonpyeongbyeo, Wongwangbyeo, Winmibyeo, and heogseon chalbeyeo (sticky forma) were registered in the national variety list and made an application to crop variety protection right. They are under review now. 2) We also keep on studying on the number of a grain of 8 lines of excellent mutant rice for the purpose of improvement of breeding . 3) We selected 3 lines which have a resistance to pod and stem blight in large soybean, 31 lines with small grain size and higher yield, 112 lines of soybean of cooking, 7 lines of low lipoxygenase content, and 12 lines with decreased phytic acid content by 20 % compared to the previous level. 2. Selection of advanced Mugunwha (Rose of Sharon) mutant 1) Bagseul, a new variety of mutant, was developed and 30 plantlets of it are being proliferated. 2) Fifty-three lines of a mutant having a various morphologies were selected

  8. Radiation mutation breeding

    Energy Technology Data Exchange (ETDEWEB)

    Song, Hi Sup; Kim, Jae Sung; Kim, Jin Kyu; Shin, In Chul; Lim, Young Taek

    1998-04-01

    In order to develop an advanced technical knowledge for the selection of better mutants, some of the crops were irradiated and the mutation rate, the survival rate and the method for selction of a mutant were studied. Furthermore, this study aimed to obtain basic data applicable to the development of genetic resources by evaluation and analysis the specific character for selection of the superior mutant and its plant breeding. 1. selection of the mutant with a superior resistance against environment in the principal crops 1) New varieties of mutant rices such as Wonpyeongbyeo, Wongwangbyeo, Winmibyeo, and heogseon chalbeyeo (sticky forma) were registered in the national variety list and made an application to crop variety protection right. They are under review now. 2) We also keep on studying on the number of a grain of 8 lines of excellent mutant rice for the purpose of improvement of breeding . 3) We selected 3 lines which have a resistance to pod and stem blight in large soybean, 31 lines with small grain size and higher yield, 112 lines of soybean of cooking, 7 lines of low lipoxygenase content, and 12 lines with decreased phytic acid content by 20 % compared to the previous level. 2. Selection of advanced Mugunwha (Rose of Sharon) mutant 1) Bagseul, a new variety of mutant, was developed and 30 plantlets of it are being proliferated. 2) Fifty-three lines of a mutant having a various morphologies were selected.

  9. Application of genomics to forage crop breeding for quality traits

    DEFF Research Database (Denmark)

    Lübberstedt, Thomas

    2007-01-01

    studied in detail and sequence motifs with likely effect on forage quality have been identified by association studies. Moreover, transgenic approaches substantiated the effect of several of these genes on forage quality. Perspectives and limitations of these findings for forage crop breeding...... selection ultimately without need of field trials, and being environment independent. In addition, once identified relevant genes controlling forage quality are targets for transgenic approaches. Substantial progress has recently been achieved in the development and application of genomic tools both...... programs. Therefore, several indirect methods including near-infrared reflectance spectroscopy (NIRS) have been established to overcome this limitation. However, the ideal indirect system for the prediction of forage performance would be based on gene-derived "functional" DNA markers, allowing early...

  10. A Review-Based Reputation Evaluation Approach for Web Services

    Institute of Scientific and Technical Information of China (English)

    Hai-Hua Li; Xiao-Yong Du; Xuan Tian

    2009-01-01

    Web services are commonly perceived as an environment of both offering opportunities and threats.In this environment, one way to minimize threats is to use reputation evaluation, which can be computed, for example, through transaction feedback.However.the current feedback-based approach is inaccurate and inefiective because of its inner limitations(e.g.,feedback quality problem).As the main source of feedback, the qualities of existing on-line reviews are often varied greatly from low to high, the main reasons include:(1)they have no standard expression formats,(2)dishonest comments may exist among these reviews due to malicious attacking.Up to present,the quality problem of review has not been well solved, which greatly degrades their importance on service reputation evaluation. Therefore, we firstly present a novel evaluation approach for review quality in terms of multiple metrics. Then. we make a further improvement in service reputation evaluation based on those filtered reviews. Experimental results show the effectiveness and efficiency of our proposed approach compared with the naive feedback-based approaches.

  11. Effect of concentrate supplementation and prolificacy on the productive and economic performance of autochthonous sheep breeds fed forage-based diets

    OpenAIRE

    Ripoll-Bosch, Raimon; Joy, Margalida; Sanz Pascua, Albina; Blasco, Isabel; Ripoll, Guillermo; Álvarez Rodríguez, Javier

    2014-01-01

    Sheep farming systems in Spain are experiencing an intensification process, characterised by a general selection criteria of enhancing prolificacy in ewes, and by increasing indoor feeding with concentrates to the detriment of grazing. This study evaluated the effects of concentrate supplementation and prolificacy on productive and economic performance of a local sheep breed in different price scenarios. Ewes were fed forage hay ad libitum, without (in pre-partum period, PRE-HAY; and in post-...

  12. Style: A Computational and Conceptual Blending-Based Approach

    Science.gov (United States)

    Goguen, Joseph A.; Harrell, D. Fox

    This chapter proposes a new approach to style, arising from our work on computational media using structural blending, which enriches the conceptual blending of cognitive linguistics with structure building operations in order to encompass syntax and narrative as well as metaphor. We have implemented both conceptual and structural blending, and conducted initial experiments with poetry, including interactive multimedia poetry, although the approach generalizes to other media. The central idea is to generate multimedia content and analyze style in terms of blending principles, based on our finding that different principles from those of common sense blending are often needed for some contemporary poetic metaphors.

  13. Ontology based approach for video transmission over the network

    CERN Document Server

    Garg, Rachit Mohan; Tyagi, Neha; 10.5121/ijma.2011.3106

    2011-01-01

    With the increase in the bandwidth & the transmission speed over the internet, transmission of multimedia objects like video, audio, images has become an easier work. In this paper we provide an approach that can be useful for transmission of video objects over the internet without much fuzz. The approach provides a ontology based framework that is used to establish an automatic deployment of video transmission system. Further the video is compressed using the structural flow mechanism that uses the wavelet principle for compression of video frames. Finally the video transmission algorithm known as RRDBFSF algorithm is provided that makes use of the concept of restrictive flooding to avoid redundancy thereby increasing the efficiency.

  14. Non-frontal model based approach to forensic face recognition

    OpenAIRE

    Dutta, Abhishek; Veldhuis, Raymond; Spreeuwers, Luuk

    2012-01-01

    In this paper, we propose a non-frontal model based approach which ensures that a face recognition system always gets to compare images having similar view (or pose). This requires a virtual suspect reference set that consists of non-frontal suspect images having pose similar to the surveillance view trace image. We apply the 3D model reconstruction followed by image synthesis approach to the frontal view mug shot images in the suspect reference set in order to create such a virtual suspect r...

  15. Mesh Geometric Editing Approach Based on Gpu Texture

    Directory of Open Access Journals (Sweden)

    Guiping Qian

    2012-09-01

    Full Text Available This paper presents a novel interactive mesh editing approach based on GPU texture mapping. The main feature is that it copies 2D surface geometry information to GPU frame buffer. The planar mesh information is transformed into GPU texture and placed on apposite position of target mesh. 3D information is retrieved after stitching two mesh components from the primitive vertex coordinates. When running real-time mesh cloning operator, our mesh editing approach can copy arbitrary irregular geometric features from source mesh to target mesh. Experimental results indicate that our method can outperform previous related mesh editing techniques.

  16. An Approach for Composing Services Based on Environment Ontology

    Directory of Open Access Journals (Sweden)

    Guangjun Cai

    2013-01-01

    Full Text Available Service-oriented computing is revolutionizing the modern computing paradigms with its aim to boost software reuse and enable business agility. Under this paradigm, new services are fabricated by composing available services. The problem arises as how to effectively and efficiently compose heterogeneous services facing the high complexity of service composition. Based on environment ontology, this paper introduces a requirement-driven service composition approach. We propose the algorithms to decompose the requirement, the rules to deduct the relation between services, and the algorithm for composing service. The empirical results and the comparison with other services’ composition methodologies show that this approach is feasible and efficient.

  17. New biotechnology enhances the application of cisgenesis in plant breeding

    Directory of Open Access Journals (Sweden)

    Hongwei eHou

    2014-08-01

    Full Text Available Cisgenesis is genetic modification to transfer beneficial alleles from crossable species into a recipient plant. The donor genes transferred by cisgenesis are the same as those used in traditional breeding. It can avoid linkage drag, enhance the use of existing gene alleles. This approach combines traditional breeding techniques with modern biotechnology and dramatically speeds up the breeding process. This allows plant genomes to be modified while remaining plants within the gene pool. Therefore, cisgenic plants should not be assessed as transgenics for environmental impacts.

  18. Network Medicine: A Network-based Approach to Human Diseases

    Science.gov (United States)

    Ghiassian, Susan Dina

    With the availability of large-scale data, it is now possible to systematically study the underlying interaction maps of many complex systems in multiple disciplines. Statistical physics has a long and successful history in modeling and characterizing systems with a large number of interacting individuals. Indeed, numerous approaches that were first developed in the context of statistical physics, such as the notion of random walks and diffusion processes, have been applied successfully to study and characterize complex systems in the context of network science. Based on these tools, network science has made important contributions to our understanding of many real-world, self-organizing systems, for example in computer science, sociology and economics. Biological systems are no exception. Indeed, recent studies reflect the necessity of applying statistical and network-based approaches in order to understand complex biological systems, such as cells. In these approaches, a cell is viewed as a complex network consisting of interactions among cellular components, such as genes and proteins. Given the cellular network as a platform, machinery, functionality and failure of a cell can be studied with network-based approaches, a field known as systems biology. Here, we apply network-based approaches to explore human diseases and their associated genes within the cellular network. This dissertation is divided in three parts: (i) A systematic analysis of the connectivity patterns among disease proteins within the cellular network. The quantification of these patterns inspires the design of an algorithm which predicts a disease-specific subnetwork containing yet unknown disease associated proteins. (ii) We apply the introduced algorithm to explore the common underlying mechanism of many complex diseases. We detect a subnetwork from which inflammatory processes initiate and result in many autoimmune diseases. (iii) The last chapter of this dissertation describes the

  19. Does genomic selection have a future in plant breeding?

    Science.gov (United States)

    Jonas, Elisabeth; de Koning, Dirk-Jan

    2013-09-01

    Plant breeding largely depends on phenotypic selection in plots and only for some, often disease-resistance-related traits, uses genetic markers. The more recently developed concept of genomic selection, using a black box approach with no need of prior knowledge about the effect or function of individual markers, has also been proposed as a great opportunity for plant breeding. Several empirical and theoretical studies have focused on the possibility to implement this as a novel molecular method across various species. Although we do not question the potential of genomic selection in general, in this Opinion, we emphasize that genomic selection approaches from dairy cattle breeding cannot be easily applied to complex plant breeding.

  20. A novel image fusion approach based on compressive sensing

    Science.gov (United States)

    Yin, Hongpeng; Liu, Zhaodong; Fang, Bin; Li, Yanxia

    2015-11-01

    Image fusion can integrate complementary and relevant information of source images captured by multiple sensors into a unitary synthetic image. The compressive sensing-based (CS) fusion approach can greatly reduce the processing speed and guarantee the quality of the fused image by integrating fewer non-zero coefficients. However, there are two main limitations in the conventional CS-based fusion approach. Firstly, directly fusing sensing measurements may bring greater uncertain results with high reconstruction error. Secondly, using single fusion rule may result in the problems of blocking artifacts and poor fidelity. In this paper, a novel image fusion approach based on CS is proposed to solve those problems. The non-subsampled contourlet transform (NSCT) method is utilized to decompose the source images. The dual-layer Pulse Coupled Neural Network (PCNN) model is used to integrate low-pass subbands; while an edge-retention based fusion rule is proposed to fuse high-pass subbands. The sparse coefficients are fused before being measured by Gaussian matrix. The fused image is accurately reconstructed by Compressive Sampling Matched Pursuit algorithm (CoSaMP). Experimental results demonstrate that the fused image contains abundant detailed contents and preserves the saliency structure. These also indicate that our proposed method achieves better visual quality than the current state-of-the-art methods.

  1. GENETICS AND GENOMICS - INTEGRATION OF MOLECULAR GENETICS INTO A BREEDING PROGRAM FOR RAINBOW TROUT

    Science.gov (United States)

    At the National Center for Cool and Cold Water Aquaculture (US Department of Agriculture, Ag. Research Service) in Leetown, WV, we have a broodstock development program now entering the 2nd generation of family based selective breeding using expected breeding values (EBVs). Our major breeding objec...

  2. Public research in plant breeding and intellectual property rights: a new call for new institutional policies

    NARCIS (Netherlands)

    Tripp, R.; Eaton, D.J.F.; Louwaars, N.P.

    2006-01-01

    This paper addresses the issue of using intellectual property rights (IPRs) in public sector breeding, and the potential impact on breeding strategies and on the costs and benefits. The paper is based on a study on the impact of IPRs in the breeding industry in developing countries. There are three

  3. MDA based-approach for UML Models Complete Comparison

    CERN Document Server

    Chaouni, Samia Benabdellah; Mouline, Salma

    2011-01-01

    If a modeling task is distributed, it will frequently be necessary to integrate models developed by different team members. Problems occur in the models integration step and particularly, in the comparison phase of the integration. This issue had been discussed in several domains and various models. However, previous approaches have not correctly handled the semantic comparison. In the current paper, we provide a MDA-based approach for models comparison which aims at comparing UML models. We develop an hybrid approach which takes into account syntactic, semantic and structural comparison aspects. For this purpose, we use the domain ontology as well as other resources such as dictionaries. We propose a decision support system which permits the user to validate (or not) correspondences extracted in the comparison phase. For implementation, we propose an extension of the generic correspondence metamodel AMW in order to transform UML models to the correspondence model.

  4. MDA based-approach for UML Models Complete Comparison

    Directory of Open Access Journals (Sweden)

    Samia Benabdellah Chaouni

    2011-03-01

    Full Text Available If a modeling task is distributed, it will frequently be necessary to integrate models developed by different team members. Problems occur in the models integration step and particularly, in the comparison phase of the integration. This issue had been discussed in several domains and various models. However, previous approaches have not correctly handled the semantic comparison. In the current paper, we provide a MDA-based approach for models comparison which aims at comparing UML models. We develop an hybrid approach which takes into account syntactic, semantic and structural comparison aspects. For this purpose, we use the domain ontology as well as other resources such as dictionaries. We propose a decision support system which permits the user to validate (or not correspondences extracted in the comparison phase. For implementation, we propose an extension of the generic correspondence metamodel AMW in order to transform UML models to the correspondence model.

  5. An engineering based approach for hydraulic computations in river flows

    Science.gov (United States)

    Di Francesco, S.; Biscarini, C.; Pierleoni, A.; Manciola, P.

    2016-06-01

    This paper presents an engineering based approach for hydraulic risk evaluation. The aim of the research is to identify a criteria for the choice of the simplest and appropriate model to use in different scenarios varying the characteristics of main river channel. The complete flow field, generally expressed in terms of pressure, velocities, accelerations can be described through a three dimensional approach that consider all the flow properties varying in all directions. In many practical applications for river flow studies, however, the greatest changes occur only in two dimensions or even only in one. In these cases the use of simplified approaches can lead to accurate results, with easy to build and faster simulations. The study has been conducted taking in account a dimensionless parameter of channels (ratio of curvature radius and width of the channel (R/B).

  6. An MAS-Based ETL Approach for Complex Data

    CERN Document Server

    Boussaïd, Omar; Darmont, Jérôme

    2008-01-01

    In a data warehousing process, the phase of data integration is crucial. Many methods for data integration have been published in the literature. However, with the development of the Internet, the availability of various types of data (images, texts, sounds, videos, databases...) has increased, and structuring such data is a difficult task. We name these data, which may be structured or unstructured, "complex data". In this paper, we propose a new approach for complex data integration, based on a Multi-Agent System (MAS), in association to a data warehousing approach. Our objective is to take advantage of the MAS to perform the integration phase for complex data. We indeed consider the different tasks of the data integration process as services offered by agents. To validate this approach, we have actually developed an MAS for complex data integration.

  7. Breeding blanket design for ITER and prototype (DEMO) fusion reactors and breeding materials issues

    Energy Technology Data Exchange (ETDEWEB)

    Takatsu, H.; Enoeda, M. [Japan Atomic Energy Research Inst., Naka, Ibaraki (Japan). Naka Fusion Research Establishment

    1998-03-01

    Current status of the designs of the ITER breeding blanket and DEMO blankets is introduced placing emphasis on the breeding materials selection and related issues. The former design is based on the up-to-date design activities, as of October 1997, being performed jointly by Joint Central Team (JCT) and Home Teams (HT`s), while the latter is based on the DEMO blanket test module designs being proposed by each Party at the TBWG (Test Blanket Working Group) meetings. (J.P.N.)

  8. A fuzzy behaviorist approach to sensor-based robot control

    Energy Technology Data Exchange (ETDEWEB)

    Pin, F.G.

    1996-05-01

    Sensor-based operation of autonomous robots in unstructured and/or outdoor environments has revealed to be an extremely challenging problem, mainly because of the difficulties encountered when attempting to represent the many uncertainties which are always present in the real world. These uncertainties are primarily due to sensor imprecisions and unpredictability of the environment, i.e., lack of full knowledge of the environment characteristics and dynamics. An approach. which we have named the {open_quotes}Fuzzy Behaviorist Approach{close_quotes} (FBA) is proposed in an attempt to remedy some of these difficulties. This approach is based on the representation of the system`s uncertainties using Fuzzy Set Theory-based approximations and on the representation of the reasoning and control schemes as sets of elemental behaviors. Using the FBA, a formalism for rule base development and an automated generator of fuzzy rules have been developed. This automated system can automatically construct the set of membership functions corresponding to fuzzy behaviors. Once these have been expressed in qualitative terms by the user. The system also checks for completeness of the rule base and for non-redundancy of the rules (which has traditionally been a major hurdle in rule base development). Two major conceptual features, the suppression and inhibition mechanisms which allow to express a dominance between behaviors are discussed in detail. Some experimental results obtained with the automated fuzzy, rule generator applied to the domain of sensor-based navigation in aprion unknown environments. using one of our autonomous test-bed robots as well as a real car in outdoor environments, are then reviewed and discussed to illustrate the feasibility of large-scale automatic fuzzy rule generation using the {open_quotes}Fuzzy Behaviorist{close_quotes} concepts.

  9. Indigenous sheep breeds in organic livestock production in karst areas of Croatia

    OpenAIRE

    Radin, Ms Lada; Šimpraga, prof. Miljenko; Vojta, dr. Aleksandar; Marinculić, A.

    2008-01-01

    Organic sheep breeding in Croatia is based on indigenous breeds, which are well adapted to their environment. This practice eliminates most of the problems usually encountered when imported foreign breeds have to be adjusted to the new conditions. Karst areas, encompassing about 50% of Croatian territory, are the natural habitat to eight of nine indigenous sheep breeds. These areas are nearly free from pollution, which makes them ideal for organic production. These facts were the foundations ...

  10. The Effects of Breeding Systems on Genetic Architecture

    OpenAIRE

    Dolgin, Elie

    2008-01-01

    Differences in reproductive strategies are a major factor influencing the patterns of genetic variability. Inbreeding and other non-recombining breeding systems can have profound effects on the efficacy of natural selection, which should be manifested in the patterns of genetic diversity within and between species. The impact of an organism’s breeding system can be investigated through a number of approaches. In this thesis, I use mathematical modelling, computer simulations, ...

  11. Characteristics important for organic breeding of vegetable crops

    Directory of Open Access Journals (Sweden)

    Zdravković Jasmina

    2010-01-01

    Full Text Available The remarkable development and application of new genetic The Institute for Vegetable Crops possesses a rich germplasm collection of vegetables, utilized as gene resource for breeding specific traits. Onion and garlic breeding programs are based on chemical composition improvement. There are programs for identification and use of genotypes characterized by high tolerance to economically important diseases. Special attention is paid to breeding cucumber and tomato lines tolerant to late blight. As a result, late blight tolerant pickling cucumber line, as well as late blight tolerant tomato lines and hybrids are realized. Research on bean drought stress tolerance is initiated. Lettuce breeding program including research on spontaneous flora is started and interspecies hybrids were observed as possible genetic variability source. It is important to have access to a broad range of vegetable genotypes in order to meet the needs of organic agriculture production. Appreciating the concept of sustainable agriculture, it is important to introduce organic agriculture programs in breeding institutions.

  12. Controlling Powdery Scab: The Breeding Approach

    Science.gov (United States)

    Powdery scab is a serious disease of potato caused by the fungus Spongospora subterranea. S. subterranea is a member of the Plasmodiophorales, also known as the parasitic slime molds. The primary diagnostic sign of the disease are cystosori, spongelike aggregates of cysts or resting spores. The ...

  13. A Semantics-Based Approach to Retrieving Biomedical Information

    DEFF Research Database (Denmark)

    Andreasen, Troels; Bulskov, Henrik; Zambach, Sine;

    2011-01-01

    This paper describes an approach to representing, organising, and accessing conceptual content of biomedical texts using a formal ontology. The ontology is based on UMLS resources supplemented with domain ontologies developed in the project. The approach introduces the notion of ‘generative ontol...... of data mining of texts identifying paraphrases and concept relations and measuring distances between key concepts in texts. Thus, the project is distinct in its attempt to provide a formal underpinning of conceptual similarity or relatedness of meaning.......This paper describes an approach to representing, organising, and accessing conceptual content of biomedical texts using a formal ontology. The ontology is based on UMLS resources supplemented with domain ontologies developed in the project. The approach introduces the notion of ‘generative...... ontologies’, i.e., ontologies providing increasingly specialised concepts reflecting the phrase structure of natural language. Furthermore, we propose a novel so called ontological semantics which maps noun phrases from texts and queries into nodes in the generative ontology. This enables an advanced form...

  14. A microfabrication-based approach to quantitative isothermal titration calorimetry.

    Science.gov (United States)

    Wang, Bin; Jia, Yuan; Lin, Qiao

    2016-04-15

    Isothermal titration calorimetry (ITC) directly measures heat evolved in a chemical reaction to determine equilibrium binding properties of biomolecular systems. Conventional ITC instruments are expensive, use complicated design and construction, and require long analysis times. Microfabricated calorimetric devices are promising, although they have yet to allow accurate, quantitative ITC measurements of biochemical reactions. This paper presents a microfabrication-based approach to integrated, quantitative ITC characterization of biomolecular interactions. The approach integrates microfabricated differential calorimetric sensors with microfluidic titration. Biomolecules and reagents are introduced at each of a series of molar ratios, mixed, and allowed to react. The reaction thermal power is differentially measured, and used to determine the thermodynamic profile of the biomolecular interactions. Implemented in a microdevice featuring thermally isolated, well-defined reaction volumes with minimized fluid evaporation as well as highly sensitive thermoelectric sensing, the approach enables accurate and quantitative ITC measurements of protein-ligand interactions under different isothermal conditions. Using the approach, we demonstrate ITC characterization of the binding of 18-Crown-6 with barium chloride, and the binding of ribonuclease A with cytidine 2'-monophosphate within reaction volumes of approximately 0.7 µL and at concentrations down to 2mM. For each binding system, the ITC measurements were completed with considerably reduced analysis times and material consumption, and yielded a complete thermodynamic profile of the molecular interaction in agreement with published data. This demonstrates the potential usefulness of our approach for biomolecular characterization in biomedical applications.

  15. Proposed Representation Approach Based on Description Logics Formalism

    Directory of Open Access Journals (Sweden)

    Yasser Yahiaoui

    2016-05-01

    Full Text Available The most familiar concept in Artificial intelligence is the knowledges representation. It aims to find explicit symbolization covering all semantic aspects of knowledge, and to make possible the use of this representation to produce an intelligent behavior like reasoning. The most important constraint is the usability of the representation; it’s why the structures used must be well defined to facilitate manipulation for reasoning algorithms which leads to facilitate their implementation. In this paper we propose a new approach based on the description logics formalism for the goal of simplification of description logics system implementation. This approach can reduce the complexity of reasoning Algorithm by the vectorisation of concept definition based on the subsumption hierarchy.

  16. A NEW ADMISSION CONTROL APPROACH BASED ON PREDICTION

    Institute of Scientific and Technical Information of China (English)

    Lu Kaining; Jin Zhigang; Zou Jun

    2002-01-01

    Admission control plays an important role in providing QoS to network users. Motivated by the measurement-based admission control algorithm, this letter proposed a new admission control approach for integrated service packet network based on traffic prediction. In the letter, FARIMA(p, d, q) models in the admission control algorithm is deployed. A method to simplify the FARIMA model fitting procedure and hence to reduce the time of traffic modeling and prediction is suggested. The feasibility-study experiments show that FARIMA models which have less number of parameters can be used to model and predict actual traffic on quite a large time scale. Simulation results validate the promising approach.

  17. An SQL-based approach to physics analysis

    Science.gov (United States)

    Limper, Maaike, Dr

    2014-06-01

    As part of the CERN openlab collaboration a study was made into the possibility of performing analysis of the data collected by the experiments at the Large Hadron Collider (LHC) through SQL-queries on data stored in a relational database. Currently LHC physics analysis is done using data stored in centrally produced "ROOT-ntuple" files that are distributed through the LHC computing grid. The SQL-based approach to LHC physics analysis presented in this paper allows calculations in the analysis to be done at the database and can make use of the database's in-built parallelism features. Using this approach it was possible to reproduce results for several physics analysis benchmarks. The study shows the capability of the database to handle complex analysis tasks but also illustrates the limits of using row-based storage for storing physics analysis data, as performance was limited by the I/O read speed of the system.

  18. Knowledge Management Approaches in Portal-Based Collaborative

    Directory of Open Access Journals (Sweden)

    Mihaela I. MUNTEAN

    2009-01-01

    Full Text Available Collaboration involves a different approach to business – focused on managing business relationships between people, within or without groups, and within and between organizations. Collaborative enterprises differ from other business in a number of ways and collaborative working needs to be simultaneously a business philosophy, strategy and operational working. Effective collaboration unlocks the potential of the collective knowledge and intellectual capital of the organization and its networks of business partners, suppliers and customers. At the core of true collaboration is the ability to share and catalogue knowledge, ideas, standards, best practices, and lessons learned and to be able to retrieve that knowledge from anywhere at any time. Knowledge management is not a goal by itself. Businesses don't exist with the purpose of spreading and advancing knowledge, they exist for selling competitive products and services of high quality. Based on these considerations, we propose some knowledge management approaches for portal-based collaborative environments.

  19. Nucleic acid-based approaches to STAT inhibition.

    Science.gov (United States)

    Sen, Malabika; Grandis, Jennifer R

    2012-10-01

    Silencing of abnormally activated genes can be accomplished in a highly specific manner using nucleic acid based approaches. The focus of this review includes the different nucleic acid based inhibition strategies such as antisense oligodeoxynucleotides, small interfering RNA (siRNA), dominant-negative constructs, G-quartet oligonucleotides and decoy oligonucleotides, their mechanism of action and the effectiveness of these approaches to targeting the STAT (signal transducer and activator of transcription) proteins in cancer. Among the STAT proteins, especially STAT3, followed by STAT5, are the most frequently activated oncogenic STATs, which have emerged as plausible therapeutic cancer targets. Both STAT3 and STAT5 have been shown to regulate numerous oncogenic signaling pathways including proliferation, survival, angiogenesis and migration/invasion. PMID:24058785

  20. Data Warehouse Requirements Analysis Framework: Business-Object Based Approach

    Directory of Open Access Journals (Sweden)

    Anirban Sarkar

    2012-01-01

    Full Text Available Detailed requirements analysis plays a key role towards the design of successful Data Warehouse (DW system. The requirements analysis specifications are used as the prime input for the construction of conceptual level multidimensional data model. This paper has proposed a Business Object based requirements analysis framework for DW system which is supported with abstraction mechanism and reuse capability. It also facilitate the stepwise mapping of requirements descriptions into high level design components of graph semantic based conceptual level object oriented multidimensional data model. The proposed framework starts with the identification of the analytical requirements using business process driven approach and finally refine the requirements in further detail to map into the conceptual level DW design model using either Demand-driven of Mixed-driven approach for DW requirements analysi

  1. English to Sanskrit Machine Translation Using Transfer Based approach

    Science.gov (United States)

    Pathak, Ganesh R.; Godse, Sachin P.

    2010-11-01

    Translation is one of the needs of global society for communicating thoughts and ideas of one country with other country. Translation is the process of interpretation of text meaning and subsequent production of equivalent text, also called as communicating same meaning (message) in another language. In this paper we gave detail information on how to convert source language text in to target language text using Transfer Based Approach for machine translation. Here we implemented English to Sanskrit machine translator using transfer based approach. English is global language used for business and communication but large amount of population in India is not using and understand the English. Sanskrit is ancient language of India most of the languages in India are derived from Sanskrit. Sanskrit can be act as an intermediate language for multilingual translation.

  2. Breeding return times and abundance in capture-recapture models.

    Science.gov (United States)

    Pledger, Shirley; Baker, Edward; Scribner, Kim

    2013-12-01

    For many long-lived animal species, individuals do not breed every year, and are often not accessible during non-breeding periods. Individuals exhibit site fidelity if they return to the same breeding colony or spawning ground when they breed. If capture and recapture is only possible at the breeding site, temporary emigration models are used to allow for only a subset of the animals being present in any given year. Most temporary emigration models require the use of the robust sampling design, and their focus is usually on probabilities of annual survival and of transition between breeding and non-breeding states. We use lake sturgeon (Acipenser fulvescens) data from a closed population where only a simple (one sample per year) sampling scheme is possible, and we also wish to estimate abundance as well as sex-specific survival and breeding return time probabilities. By adding return time parameters to the Schwarz-Arnason version of the Jolly-Seber model, we have developed a new likelihood-based model which yields plausible estimates of abundance, survival, transition and return time parameters. An important new finding from investigation of the model is the overestimation of abundance if a Jolly-Seber model is used when Markovian temporary emigration is present.

  3. Approach Based Patterns for System-of-Systems Reconfiguration

    OpenAIRE

    Petitdemange, Franck; Borne, Isabelle; Buisson, Jeremy

    2015-01-01

    International audience Systems-of-systems (SoS) are a particular class of systems that recruit dynamically their constituents to achieve a global goal. To accomodate this approach, the architecture of SoS is usually described by architectural patterns to be instantiated at runtime. Based on the study of an example, we introduce reconfiguration patterns to help reasoning on reconfiguration and maintaining the architectural patterns of the SoS.

  4. REUSING APPROACH FOR SOFTWARE PROCESSES BASED ON SOFTWARE ARCHITECTURES.

    OpenAIRE

    Aoussat, Fadila; Ahmed-Nacer, Mohamed; Oussalah, Mourad Chabane

    2010-01-01

    International audience; Capitalizing and reusing the knowledge in the field of software process engineering is the objective of this work. In order to ensure a high quality for software process models, regarding to the specific needs of new development techniques and methods, we propose an approach based on two essential points: The Capitalization of the knowledge through a domain ontology, and the reusing of this knowledge across handling software process models as software architectures.

  5. Decent work on industrial enterprise based the approach competentive

    OpenAIRE

    Humeniuk, Nataliia

    2013-01-01

    The article proves that achieving decent work possible under the coordination purposes of the enterprise with the goals of employees on the basis of explicit requirements as to such employees to the production process. In connection with the proposed use of the competency approach to create such a system of priorities, and the control scheme of responsibility includes managing staff, working conditions and social processes. Based on the generalization of human resource management processes pr...

  6. A bee colony optimization-based approach for binary optimization

    OpenAIRE

    Kıran, Mustafa Servet; Gündüz, Mesut

    2013-01-01

    The bee colony optimization (BCO) algorithm, one of the swarm intelligence algorithms, is a population based iterative search algorithm. Being inspired by collective bee intelligence, BCO has been proposed for solving discrete optimization problems such as travelling salesman problem. The BCO uses constructive approach for creating a feasible solution for the discrete optimization problems but in this study, we used the solution improvement technique due to nature of the uncapacitated facilit...

  7. A Fuzzy Watermarking Approach Based on the Human Visual System

    OpenAIRE

    Sameh Oueslati, Adnane Cherif & Basel Solaiman

    2010-01-01

    The implementation of our watermarking system is based on a hybrid systemcombining the human visual system (HVS) and the fuzzy inference system (FIS),which always passes through the transcription of human expertise in the form offuzzy rules expressed in natural language, which allows our watermarkingsystem remain understandable for non expert and become more friendly. Thetechnique discussed in this paper is the use of an advanced approach to thetechnique of watermark that is the multi-waterma...

  8. A new flight guidance approach based on differential flatness

    OpenAIRE

    Lu, Wen Chi; Mora-Camino, Félix; Achaibou, Karim

    2004-01-01

    International audience With the sustained increase of air traffic, the demand for new maneuvering capabilities of transport aircrafts is getting more important in order to tackle traffic saturated conditions. In this communication, a new guidance control structure is proposed to perform trajectory tracking through smooth manoeuvers. The design approach is based first on a differential flatness property of aircraft guidance dynamics which is displayed in This work and then on the use of neu...

  9. Logic Minimization Based Approach for Compressing Image Data

    OpenAIRE

    Augustine, Jacob; Feng, Wen; Jacob, James

    1995-01-01

    We propose a novel approach for the lossless compression of binary images using logic minimization. The image is divided into windows or blocks of size $r\\times c$ pixels and each block is transformed into a Boolean switching function in cubical form, treating the pixel values as output of the function. Compression is performed by minimizing these switching functions using ESPRESSO, a cube-based two-level logic minimizer. To reduce the bits required to encode the minimized cubes (product term...

  10. Performance Analysis of STFT Based Timing Approach to OFDM Systems

    Institute of Scientific and Technical Information of China (English)

    KUANG Yu-jun; TENG Yong; YIN Chang-chuan; HAO Jian-jun; YUE Guang-xin

    2003-01-01

    This paper mainly focuses on performance analysis of the previously proposed STFT based 2-D timing approach to OFDM systems and presents simulations results of its performance in AWGN and multipath fading environment and its robustness against the duration of Channel Impulse Response (CIR) and frequency offset. Simulation results suggest that a revised version of Short-Time Fourier Transform (STFT) can be used to greatly reduce computational complexity, especially at higher SNR.

  11. Agile Service Development: A Rule-Based Method Engineering Approach

    OpenAIRE

    Hoppenbrouwers, S.J.B.A.; Zoet, M.; Versendaal, J.; van de Weerd, I.

    2011-01-01

    Agile software development has evolved into an increasingly mature software development approach and has been applied successfully in many software vendors’ development departments. In this position paper, we address the broader agile service development. Based on method engineering principles we define a framework that conceptualizes an operational way of working for the development of services, emphatically taking into account agility. As a first level of agility, the framework contains sit...

  12. Improved Approach Based on SVM for License Plate Character Recognition

    Institute of Scientific and Technical Information of China (English)

    WANG Xiao-hua; WANG Xiao-guang

    2005-01-01

    An improved approach based on support vector machine (SVM) called the center distance ratio method is presented for license plate character recognition. First the support vectors are pre-extracted. A minimal set called the margin vector set, which contains all support vectors, is extracted. These margin vectors compose new training data and construct the classifier by using the general SVM optimized. The experimental results show that the improved SVM method does well at correct rate and training speed.

  13. Lexical transfer in Norwegian interlanguage : A detection-based approach

    OpenAIRE

    2012-01-01

    This study investigates cross-linguistic influence ('transfer') in Norwegian interlanguage using predictive data mining technology and with a focus on lexical transfer. The impetus for the present work came from the publication of a series of studies (Jarvis & Crossley 2012) that explore the 'detection-based approach' to language transfer. The following research questions are addressed: 1. Can data mining techniques be used to identify the L1 background of Norwegian language learners ...

  14. An Ultrasound Image Despeckling Approach Based on Principle Component Analysis

    OpenAIRE

    Jawad F. Al-Asad; Ali M. Reza; Udomchai Techavipoo

    2014-01-01

    An approach based on principle component analysis (PCA) to filter out multiplicative noise from ultrasound images is presented in this paper. An image with speckle noise is segmented into small dyadic lengths, depending on the original size of the image, and the global covariance matrix is found. A projection matrix is then formed by selecting the maximum eigenvectors of the global covariance matrix. This projection matrix is used to filter speckle noise by projecting each segment into the si...

  15. A contextual modeling approach for model-based recommender systems

    OpenAIRE

    Fernández-Tobías, Ignacio; Campos Soto, Pedro G.; Cantador, Iván; Díez, Fernando

    2013-01-01

    The final publication is available at Springer via http://dx.doi.org/10.1007/978-3-642-40643-0_5 Proceedings of 15th Conference of the Spanish Association for Artificial Intelligence, CAEPIA 2013, Madrid, Spain, September 17-20, 2013. In this paper we present a contextual modeling approach for model-based recommender systems that integrates and exploits both user preferences and contextual signals in a common vector space. Differently to previous work, we conduct a user study acquiring ...

  16. An effective electrostatic-confinement based fusion approach

    OpenAIRE

    R. K. Paul

    2013-01-01

    The paper reports a new electrostatic-confinement based fusion approach, where, a new non-equilibrium distribution function for an ion-beam, compressed by an external electric force, has been derived. This distribution function allows the system to possess appreciably low and insignificant thermal energy irrespective of the energy per particle. The spread in the energy among the particles is attributed to the collisions in presence of the external force, whereas; for equilibrium, the spreadin...

  17. DIRECT APPROACH FOR SOLITON PERTURBATIONS BASED ON THE GREEN'S FUNCTION

    Institute of Scientific and Technical Information of China (English)

    PAN LIU-XIAN; YAN JIA-REN; ZHOU GUANG-HUI

    2001-01-01

    A direct approach has been developed for soliton perturbations based on the Green's function. We first linearized the soliton equation, and then derived the Green's function corresponding to approximation equations of different orders. Finally, we obtained the effects of perturbation on a soliton, namely both the slow time dependence of the soliton parameters and the corrections up to the second-order approximation. The higher-order effects can also be obtained in the same way.

  18. A Knowledge—Based Approach to Program Synthesis from Examples

    Institute of Scientific and Technical Information of China (English)

    朱鸿; 金凌紫

    1991-01-01

    This paper proposes an approach to synthesize functional programs of Backus' FP system[1,2] from input/output instances.Based on a theory of orthogonal expansion of programs3[,4],the task of program synthesis is expressed in program equations,and fulfilled by solving them according to the knowledge about the equivalence between programs.Some general knowledge of solving program equations with a number of examples are given in the paper.

  19. Potato breeding in the Netherlands

    NARCIS (Netherlands)

    Haan, de H.

    1953-01-01

    A remarkable feature of potato breeding in the Netherlands is the great number of private breeders who have concentrated their efforts on the improvement of the potato. The author calls attention to some circumstances and measures that have made potato breeding attractive in the Netherlands

  20. A Wavelet-Based Approach to Pattern Discovery in Melodies

    DEFF Research Database (Denmark)

    Velarde, Gissel; Meredith, David; Weyde, Tillman

    2016-01-01

    We present a computational method for pattern discovery based on the application of the wavelet transform to symbolic representations of melodies or monophonic voices. We model the importance of a discovered pattern in terms of the compression ratio that can be achieved by using it to describe...... transform (CWT) at a single scale using the Haar wavelet. These representations are segmented using various approaches and the segments are then concatenated based on their similarity. The concatenated segments are compared, clustered and ranked. The method was evaluated on two musicological tasks...

  1. A New Approach to Image Fusion Based on Cokriging

    Science.gov (United States)

    Memarsadeghi, Nargess; LeMoigne, Jacqueline; Mount, David M.; Morisette, Jeffrey T.

    2005-01-01

    We consider the image fusion problem involving remotely sensed data. We introduce cokriging as a method to perform fusion. We investigate the advantages of fusing Hyperion with ALI. The evaluation is performed by comparing the classification of the fused data with that of input images and by calculating well-chosen quantitative fusion quality metrics. We consider the Invasive Species Forecasting System (ISFS) project as our fusion application. The fusion of ALI with Hyperion data is studies using PCA and wavelet-based fusion. We then propose utilizing a geostatistical based interpolation method called cokriging as a new approach for image fusion.

  2. GPC Using a Delta-Domain Emulator-Based Approach

    DEFF Research Database (Denmark)

    Lauritsen, Morten Bach; Jensen, Morten Rostgaard; Poulsen, Niels Kjølstad

    1997-01-01

    are considered: one having a well-defined limit as the sampling period tends to zero, the other being a close approximation to the conventional discrete-time GPC. Both algorithms are discrete in nature and well-suited for adaptive control. The fact that delta-domain models are used does not introduce......This paper describes new approaches to generalized predictive control formulated in the delta (delta) domain. A new delta-domain version of the continuous-time emulator-based predictor is presented. It is shown to contain the optimal discrete-time predictor based on incomplete information as a...

  3. Fragment-based approaches and computer-aided drug discovery.

    Science.gov (United States)

    Rognan, Didier

    2012-01-01

    Fragment-based design has significantly modified drug discovery strategies and paradigms in the last decade. Besides technological advances and novel therapeutic avenues, one of the most significant changes brought by this new discipline has occurred in the minds of drug designers. Fragment-based approaches have markedly impacted rational computer-aided design both in method development and in applications. The present review illustrates the importance of molecular fragments in many aspects of rational ligand design, and discusses how thinking in "fragment space" has boosted computational biology and chemistry. PMID:21710380

  4. A mindfulness-based approach to the treatment of insomnia.

    Science.gov (United States)

    Ong, Jason; Sholtes, David

    2010-11-01

    Mindfulness meditation has emerged as a novel approach to emotion regulation and stress reduction that has several health benefits. Preliminary work has been conducted on mindfulness-based therapy for insomnia (MBT-I), a meditation-based program for individuals suffering from chronic sleep disturbance. This treatment integrates behavioral treatments for insomnia with the principles and practices of mindfulness meditation. A case illustration of a chronic insomnia sufferer demonstrates the application of mindfulness principles for developing adaptive ways of working with the nocturnal symptoms and waking consequences of chronic insomnia.

  5. Science based integrated approach to advanced nuclear fuel development - vision, approach, and overview

    Energy Technology Data Exchange (ETDEWEB)

    Unal, Cetin [Los Alamos National Laboratory; Pasamehmetoglu, Kemal [IDAHO NATIONAL LAB; Carmack, Jon [IDAHO NATIONAL LAB

    2010-01-01

    Advancing the performance of Light Water Reactors, Advanced Nuclear Fuel Cycles, and Advanced Rcactors, such as the Next Generation Nuclear Power Plants, requires enhancing our fundamental understanding of fuel and materials behavior under irradiation. The capability to accurately model the nuclear fuel systems is critical. In order to understand specific aspects of the nuclear fuel, fully coupled fuel simulation codes are required to achieve licensing of specific nuclear fuel designs for operation. The backbone of these codes, models, and simulations is a fundamental understanding and predictive capability for simulating the phase and microstructural behavior of the nuclear fuel system materials and matrices. The purpose of this paper is to identify the modeling and simulation approach in order to deliver predictive tools for advanced fuels development. The coordination between experimental nuclear fuel design, development technical experts, and computational fuel modeling and simulation technical experts is a critical aspect of the approach and naturally leads to an integrated, goal-oriented science-based R & D approach and strengthens both the experimental and computational efforts. The Advanced Fuels Campaign (AFC) and Nuclear Energy Advanced Modeling and Simulation (NEAMS) Fuels Integrated Performance and Safety Code (IPSC) are working together to determine experimental data and modeling needs. The primary objective of the NEAMS fuels IPSC project is to deliver a coupled, three-dimensional, predictive computational platform for modeling the fabrication and both normal and abnormal operation of nuclear fuel pins and assemblies, applicable to both existing and future reactor fuel designs. The science based program is pursuing the development of an integrated multi-scale and multi-physics modeling and simulation platform for nuclear fuels. This overview paper discusses the vision, goals and approaches how to develop and implement the new approach.

  6. Application of a swarm-based approach for phase unwrapping

    Science.gov (United States)

    da S. Maciel, Lucas; Albertazzi G., Armando, Jr.

    2014-07-01

    An algorithm for phase unwrapping based on swarm intelligence is proposed. The novel approach is based on the emergent behavior of swarms. This behavior is the result of the interactions between independent agents following a simple set of rules and is regarded as fast, flexible and robust. The rules here were designed with two purposes. Firstly, the collective behavior must result in a reliable map of the unwrapped phase. The unwrapping reliability was evaluated by each agent during run-time, based on the quality of the neighboring pixels. In addition, the rule set must result in a behavior that focuses on wrapped regions. Stigmergy and communication rules were implemented in order to enable each agent to seek less worked areas of the image. The agents were modeled as Finite-State Machines. Based on the availability of unwrappable pixels, each agent assumed a different state in order to better adapt itself to the surroundings. The implemented rule set was able to fulfill the requirements on reliability and focused unwrapping. The unwrapped phase map was comparable to those from established methods as the agents were able to reliably evaluate each pixel quality. Also, the unwrapping behavior, being observed in real time, was able to focus on workable areas as the agents communicated in order to find less traveled regions. The results were very positive for such a new approach to the phase unwrapping problem. Finally, the authors see great potential for future developments concerning the flexibility, robustness and processing times of the swarm-based algorithm.

  7. Reversible Circuit Synthesis Using a Cycle-Based Approach

    CERN Document Server

    Saeedi, Mehdi; Sedighi, Mehdi; Sasanian, Zahra

    2010-01-01

    Reversible logic has applications in various research areas including signal processing, cryptography and quantum computation. In this paper, direct NCT-based synthesis of a given $k$-cycle in a cycle-based synthesis scenario is examined. To this end, a set of seven building blocks is proposed that reveals the potential of direct synthesis of a given permutation to reduce both quantum cost and average runtime. To synthesize a given large cycle, we propose a decomposition algorithm to extract the suggested building blocks from the input specification. Then, a synthesis method is introduced which uses the building blocks and the decomposition algorithm. Finally, a hybrid synthesis framework is suggested which uses the proposed cycle-based synthesis method in conjunction with one of the recent NCT-based synthesis approaches which is based on Reed-Muller (RM) spectra. The time complexity and the effectiveness of the proposed synthesis approach are analyzed in detail. Our analyses show that the proposed hybrid fra...

  8. Postmodern Fuzzy System Theory: A Deconstruction Approach Based on Kabbalah

    Directory of Open Access Journals (Sweden)

    Gabriel Burstein

    2014-11-01

    Full Text Available Modern general system theory proposed a holistic integrative approach based on input-state-output dynamics as opposed to the traditional reductionist detail based approach. Information complexity and uncertainty required a fuzzy system theory, based on fuzzy sets and fuzzy logic. While successful in dealing with analysis, synthesis and control of technical engineering systems, general system theory and fuzzy system theory could not fully deal with humanistic and human-like intelligent systems which combine technical engineering components with human or human-like components characterized by their cognitive, emotional/motivational and behavioral/action levels of operation. Such humanistic systems are essential in artificial intelligence, cognitive and behavioral science applications, organization management and social systems, man-machine systems or human factor systems, behavioral knowledge based economics and finance applications. We are introducing here a “postmodern fuzzy system theory” for controlled state dynamics and output fuzzy systems and fuzzy rule based systems using our earlier postmodern fuzzy set theory and a Kabbalah possible worlds model of modal logic and semantics type. In order to create a postmodern fuzzy system theory, we “deconstruct” a fuzzy system in order to incorporate in it the cognitive, emotional and behavioral actions and expressions levels characteristic for humanistic systems. Kabbalah offers a structural, fractal and hierarchic model for integrating cognition, emotions and behavior. We obtain a canonic deconstruction for a fuzzy system into its cognitive, emotional and behavioral fuzzy subsystems.

  9. Mapping site-based construction workers’ motivation: Expectancy theory approach

    Directory of Open Access Journals (Sweden)

    Parviz Ghoddousi

    2014-03-01

    Full Text Available The aim of this study is to apply a recently proposed model of motivation based on expectancy theory to site-based workers in the construction context and confirm the validity of this model for the construction industry. The study drew upon data from 194 site-based construction workers in Iran to test the proposed model of motivation. To this end, the structural equation modelling (SEM approach based on the confirmatory factor analysis (CFA technique was deployed. The study reveals that the proposed model of expectancy theory incorporating five indicators (i.e. intrinsic instrumentality, extrinsic instrumentality, intrinsic valence, extrinsic valence and expectancy is able to map the process of construction workers’ motivation. Nonetheless, the findings posit that intrinsic indicators could be more effective than extrinsic ones. This proffers the necessity of construction managers placing further focus on intrinsic motivators to motivate workers. 

  10. Mapping site-based construction workers’ motivation: Expectancy theory approach

    Directory of Open Access Journals (Sweden)

    Parviz Ghoddousi

    2014-03-01

    Full Text Available The aim of this study is to apply a recently proposed model of motivation based on expectancy theory to site-based workers in the construction context and confirm the validity of this model for the construction industry. The study drew upon data from 194 site-based construction workers in Iran to test the proposed model of motivation. To this end, the structural equation modelling (SEM approach based on the confirmatory factor analysis (CFA technique was deployed. The study reveals that the proposed model of expectancy theory incorporating five indicators (i.e. intrinsic instrumentality, extrinsic instrumentality, intrinsic valence, extrinsic valence and expectancy is able to map the process of construction workers’ motivation. Nonetheless, the findings posit that intrinsic indicators could be more effective than extrinsic ones. This proffers the necessity of construction managers placing further focus on intrinsic motivators to motivate workers.

  11. Model-based approach for elevator performance estimation

    Science.gov (United States)

    Esteban, E.; Salgado, O.; Iturrospe, A.; Isasa, I.

    2016-02-01

    In this paper, a dynamic model for an elevator installation is presented in the state space domain. The model comprises both the mechanical and the electrical subsystems, including the electrical machine and a closed-loop field oriented control. The proposed model is employed for monitoring the condition of the elevator installation. The adopted model-based approach for monitoring employs the Kalman filter as an observer. A Kalman observer estimates the elevator car acceleration, which determines the elevator ride quality, based solely on the machine control signature and the encoder signal. Finally, five elevator key performance indicators are calculated based on the estimated car acceleration. The proposed procedure is experimentally evaluated, by comparing the key performance indicators calculated based on the estimated car acceleration and the values obtained from actual acceleration measurements in a test bench. Finally, the proposed procedure is compared with the sliding mode observer.

  12. EFFICIENT APPROACH TO DISCOVER INTERVAL-BASED SEQUENTIAL PATTERNS

    Directory of Open Access Journals (Sweden)

    R. Sadasivam

    2013-01-01

    Full Text Available In most of the sequential pattern mining methodology they have concentrated only on time point base event data. But some research efforts have detailed the mining patterns from time interval based event data. In many application most of the events are occurred at time interval based event not a point based interval for example patient affected by the certain time period. Our goal is to mine the frequently occurred sequential patterns in the database. In this study we have introduced a new algorithm namely KPrefixspan by modifying the TPrefixspan algorithm to overcome the demerits of that algorithm. Here new approach called refined database can reduce the scanning time extremely since the unsupported events are removed at each projection also result of the sequential pattern is extremely precise. Experiments constructed for synthetic datasets. From the experimental results we reduced the running time almost 60% and also reduce the memory usage almost 25% when compared to the existing TPrefixspan algorithm.

  13. Building enterprise reuse program--A model-based approach

    Institute of Scientific and Technical Information of China (English)

    梅宏; 杨芙清

    2002-01-01

    Reuse is viewed as a realistically effective approach to solving software crisis. For an organization that wants to build a reuse program, technical and non-technical issues must be considered in parallel. In this paper, a model-based approach to building systematic reuse program is presented. Component-based reuse is currently a dominant approach to software reuse. In this approach, building the right reusable component model is the first important step. In order to achieve systematic reuse, a set of component models should be built from different perspectives. Each of these models will give a specific view of the components so as to satisfy different needs of different persons involved in the enterprise reuse program. There already exist some component models for reuse from technical perspectives. But less attention is paid to the reusable components from a non-technical view, especially from the view of process and management. In our approach, a reusable component model--FLP model for reusable component--is introduced. This model describes components from three dimensions (Form, Level, and Presentation) and views components and their relationships from the perspective of process and management. It determines the sphere of reusable components, the time points of reusing components in the development process, and the needed means to present components in terms of the abstraction level, logic granularity and presentation media. Being the basis on which the management and technical decisions are made, our model will be used as the kernel model to initialize and normalize a systematic enterprise reuse program.

  14. Development and application of marker-assisted reverse breeding using hybrid maize germplasm

    Institute of Scientific and Technical Information of China (English)

    GUAN Yi-Xin; WANG Bao-hua; FENG Yan; LI Ping

    2015-01-01

    Humankind has been through different periods of agricultural improvement aiming at enhancing our food supply and the performance of food crops. In recent years, whole genome sequencing and deep understanding of genetic and epigenetic mechanisms have facilitated new plant breeding approaches to meet the chalenge of growing population, dwindling re-sources, and changing climate. Here we proposed a simple and fast molecular breeding method, marker-assisted reverse breeding (MARB), which wil revert any maize hybrid into inbred lines with any level of required similarity to its original parent lines. Since al the pericarp DNA of a hybrid is from the maternal parent, whereas one half of the embryo DNA is from the maternal parent and the other half from the paternal parent, so we ifrstly extract DNA from seed embryo and pericarp of a selected elite hybrid separately and then we derived the genotypes of the two parents with high-density single nucleotide polymorphism (SNP) chips. The folowing marker-assisted selection was performed based on an Ilumina low-density SNP chip designed with 192 SNPs polymorphic between the two parental genotypes, which were uniformly distributed on 10 maize chromosomes. This method has the advantages of fast speed, ifxed heterotic mode, and quick recovery of beneifcial parental genotypes compared to traditional pedigree breeding using elite hybrids. Meanwhile, MARB has the advantage of not requiring sophisticated transformation and double haploid (DH) technologies over RNA interference (RNAi)-mediated reverse breeding. In addition, MARB can also be used with feed corn harvested from big farms, which is often similar to F2 populations, and the relevant transgenes in the population can be eliminated by marker-assisted selection. As a result, the whole global commercial maize hybrids can be utilized as germplasm for breeding with MARB technology. Starting with an F2 population derived from an elite hybrid, our experiment indicates that with three

  15. Plant Breeding and Genetics Newsletter, No. 32, January 2014

    International Nuclear Information System (INIS)

    One major event this last half of 2013 was the success story of the IAEA interregional TC project INT/5/150 'Responding to the Transboundary Threat of Wheat Black Stem Rust (Ug99)'. Results have been achieved in record time; the project was started in 2009, and by mid 2013, two advanced mutant lines, resistant to the most virulent strains of wheat black stem rust (Ug99), successfully passed the national performance trials in Kenya and are ready for commercial release. A Regional Training Course was organized at IRRI (The Philippines) in the framework of regional TC project RAS/5/065 'Supporting Climate-Proofing Rice Production Systems (CRiPS) Based on Nuclear Applications'. By joining efforts, the IAEA, FAO and IRRI aim to ensure that rice scientists are acquainted with the most recent plant breeding and phenotyping approaches, allowing them to address future threats to food security stemming from climate change and other stress factors. The project also aims to act as a platform for future collaboration in rice production. This second half of the year was also the period of 'first timers'. For the first time, Lesotho is using mutation breeding techniques in potato, sweet potato and amaranth. A fellow is being introduced to these techniques at the Plant Breeding and Genetics Laboratory (PBGL) in Seibersdorf, Austria. Similarly we are supporting and nurturing the first steps of national mutation breeding programmes in Oman, Palestine, Qatar and Saudi Arabia. Another cause for excitement is the ReNuAL project: the Seibersdorf Laboratories will be upgraded and renovated, including the FAO/IAEA Agriculture and Biotechnology Laboratories. This is a huge project with many logistical challenges, which are being met with vigour and personal investment in time and energy by our staff. Our guidance in this endeavour is 'fit-forpurpose to the Member States' in the future. IAEA Member States adopted a resolution to support this initiative, and we are now seeking financial and

  16. Why breeding values estimated using familial data should not be used for genome-wide association studies.

    Science.gov (United States)

    Ekine, Chinyere C; Rowe, Suzanne J; Bishop, Stephen C; de Koning, Dirk-Jan

    2014-02-19

    In animal breeding, the genetic potential of an animal is summarized as its estimated breeding value, which is derived from its own performance as well as the performance of related individuals. Here, we illustrate why estimated breeding values are not suitable as a phenotype for genome-wide association studies. We simulated human-type and pig-type pedigrees with a range of quantitative trait loci (QTL) effects (0.5-3% of phenotypic variance) and heritabilities (0.3-0.8). We analyzed 1000 replicates of each scenario with four models: (a) a full mixed model including a polygenic effect, (b) a regression analysis using the residual of a mixed model as a trait score (so called GRAMMAR approach), (c) a regression analysis using the estimated breeding value as a trait score, and (d) a regression analysis that uses the raw phenotype as a trait score. We show that using breeding values as a trait score gives very high false-positive rates (up 14% in human pedigrees and >60% in pig pedigrees). Simulations based on a real pedigree show that additional generations of pedigree increase the type I error. Including the family relationship as a random effect provides the greatest power to detect QTL while controlling for type I error at the desired level and providing the most accurate estimates of the QTL effect. Both the use of residuals and the use of breeding values result in deflated estimates of the QTL effect. We derive the contributions of QTL effects to the breeding value and residual and show how this affects the estimates.

  17. Breeding programs for smallholder sheep farming systems: I. Evaluation of alternative designs of breeding schemes.

    Science.gov (United States)

    Gizaw, S; Rischkowsky, B; Valle-Zárate, A; Haile, A; van Arendonk, J A M; Mwai, A O; Dessie, T

    2014-10-01

    Village- and central nucleus-based schemes were simulated and evaluated for their relative bio-economic efficiencies, using Ethiopia's Menz sheep as example. The schemes were: village-based 2-tier (Scheme-1) and 1-tier (Scheme-2) cooperative village breeding schemes, dispersed village-based nuclei scheme (Scheme-3), conventional 2-tier central nucleus-based scheme (Scheme-4), and schemes linking a central nucleus and village multiplier nuclei with selection in central nucleus (Scheme-5) or in both central and village nuclei (Scheme-6). Among village-based schemes, Scheme-1 gave the highest genetic progress, while Scheme-2 was economically the most efficient with genetic gain in the breeding objective of Birr 5.6 and a profit of Birr 37.2/ewe/year. The central nucleus schemes were more efficient than the village schemes. Scheme-4 was the most efficient with genetic gain in the breeding objective of Birr 13.5 and a profit of Birr 71.2, but is operationally more difficult as it requires a very large central nucleus. The choice between village and central nucleus-based schemes would depend on local conditions (availability of infrastructure, logistics and technical knowhow and support). Linking central nucleus with village-based nuclei (Scheme-6) would be a feasible option to overcome the operational difficulties of the conventional central nucleus scheme. If a village-based breeding program is envisaged as should be the 1st step in most low-input systems, then Scheme-2 is the most efficient. To scale out to an entire Menz breed level, Scheme-3 would be recommended.

  18. ARABIC PERSON NAMES RECOGNITION BY USING A RULE BASED APPROACH

    Directory of Open Access Journals (Sweden)

    Mohammed Aboaoga

    2013-01-01

    Full Text Available Name Entity Recognition is very important task in many natural language processing applications such as; Machine Translation, Question Answering, Information Extraction, Text Summarization, Semantic Applications and Word Sense Disambiguation. Rule-based approach is one of the techniques that are used for named entity recognition to identify the named entities such as a person names, location names and organization names. The recent rule-based methods have been applied to recognize the person names in political domain. They ignored the recognition of other named entity types such as locations and organizations. We have used the rule based approach for recognizing the named entity type (person names for Arabic. We have developed four rules for identifying the person names depending on the position of name. We have used an in-house Arabic corpus collected from newspaper achieves. The evaluation method that compares the results of the system with the manually annotated text has been applied in order to compute precision, recall and f-measure. In the experiment of this study, the average f-measure for recognizing person names are (92.66, 92.04 and 90.43% in sport, economic and politic domain respectively. The experimental results showed that our rule-based method achieved the highest f-measure values in sport domain comparing with political and economic domains.

  19. EFL READING INSTRUCTION: COMMUNICATIVE TASK-BASED APPROACH

    Directory of Open Access Journals (Sweden)

    Harison Mohd Sidek

    2012-07-01

    Full Text Available The purpose of this study was to examine the overarching framework of EFL (English as a Foreign Language reading instructional approach reflected in an EFL secondary school curriculum in Malaysia. Based on such analysis, a comparison was made if Communicative Task-Based Language is the overarching instructional approach for the Malaysian EFL secondary reading curriculum. This study used document reviews as the primary data collection. The coding of data analysis was based on the modifications of the components of Richards and Rodgers’s (2001 analysis of language teaching model. The curriculum was examined in terms of theories of SLA, theories of L2 reading as well as learner roles in relation to Communicative Task-Based Language Teaching (CTBLT characteristics. The findings of the study suggest that the majority of reading tasks in the selected EFL secondary reading curriculum is highly lacking CTBLT characteristics. The results of the study were discussed in relation to the current Malaysian EFL secondary curriculum framework and their implications on the EFL reading at the tertiary level.

  20. Query Based Approach Towards Spam Attacks Using Artificial Neural Network

    Directory of Open Access Journals (Sweden)

    Gaurav Kumar Tak

    2010-10-01

    Full Text Available Currently, spam and scams are passive attack over the inbox which can initiated to steal some confidential information, to spread Worms, Viruses, Trojans, cookies and Sometimes they are used for phishing attacks. Spam mails are the major issue over mail boxes as well as over the internet. Spam mails can be the cause of phishing attack, hacking of banking accounts, attacks on confidential data. Spamming is growing at a rapid rate since sending a flood of mails is easy and very cheap. Spam mails disturb the mind-peace, waste time and consume various resources e.g., memory space and network bandwidth, so filtering of spam mails is a big issue in cyber security. This paper presents an novel approach of spam filtering which is based on some query generated approach on the knowledge base and also use some artificial neural network methods to detect the spam mails based on their behavior. analysis of the mail header, cross validation. Proposed methodology includes the 7 several steps which are well defined and achieve the higher accuracy. It works well with all kinds of spam mails (text based spam as well as image spam. Our tested data and experiments results shows promising results, and spam’s are detected out at least 98.17 % with 0.12% false positive.

  1. Spatial scale of local breeding habitat quality and adjustment of breeding decisions.

    Science.gov (United States)

    Doligez, Blandine; Berthouly, Anne; Doligez, Damien; Tanner, Marion; Saladin, Verena; Bonfils, Danielle; Richner, Heinz

    2008-05-01

    Experimental studies provide evidence that, in spatially and temporally heterogeneous environments, individuals track variation in breeding habitat quality to adjust breeding decisions to local conditions. However, most experiments consider environmental variation at one spatial scale only, while the ability to detect the influence of a factor depends on the scale of analysis. We show that different breeding decisions by adults are based on information about habitat quality at different spatial scales. We manipulated (increased or decreased) local breeding habitat quality through food availability and parasite prevalence at a small (territory) and a large (patch) scale simultaneously in a wild population of Great Tits (Parus major). Females laid earlier in high-quality large-scale patches, but laying date did not depend on small-scale territory quality. Conversely, offspring sex ratio was higher (i.e., biased toward males) in high-quality, small-scale territories but did not depend on large-scale patch quality. Clutch size and territory occupancy probability did not depend on our experimental manipulation of habitat quality, but territories located at the edge of patches were more likely to be occupied than central territories. These results suggest that integrating different decisions taken by breeders according to environmental variation at different spatial scales is required to understand patterns of breeding strategy adjustment.

  2. SMP-Based Approach for Intelligent Service Interaction

    Directory of Open Access Journals (Sweden)

    Hosam AlHakami

    2014-11-01

    Full Text Available Service-oriented computing is establishing itself as a new computing paradigm in which services advertise their capabilities within a network, and then are used, composed and orchestrated by other services and end-users. Whilst many approaches to matching service providers with consumers of their services have been developed in the past, the proposed approach in this paper takes a different view of the problem in that it does not look for the fittest individual utility, but views it as a constrained optimisation problem that matches between a set of services and a set of service requests. Our approach addresses this problem using an adaptation of the well known stable-marriage problem and demonstrates how matching between services and requests to a certain threshold can be expressed. This will contribute a fair assignment between services and requests based on their preferences. As the current state of the service selection process considers only the view of requests, the proposed approach can ensure several features to the services such as service protection and service quality, e.g. it can ensure the preservation of service availability by redirecting a coming request to a similar service if the current service is busy.

  3. Pedestrian detection from thermal images: A sparse representation based approach

    Science.gov (United States)

    Qi, Bin; John, Vijay; Liu, Zheng; Mita, Seiichi

    2016-05-01

    Pedestrian detection, a key technology in computer vision, plays a paramount role in the applications of advanced driver assistant systems (ADASs) and autonomous vehicles. The objective of pedestrian detection is to identify and locate people in a dynamic environment so that accidents can be avoided. With significant variations introduced by illumination, occlusion, articulated pose, and complex background, pedestrian detection is a challenging task for visual perception. Different from visible images, thermal images are captured and presented with intensity maps based objects' emissivity, and thus have an enhanced spectral range to make human beings perceptible from the cool background. In this study, a sparse representation based approach is proposed for pedestrian detection from thermal images. We first adopted the histogram of sparse code to represent image features and then detect pedestrian with the extracted features in an unimodal and a multimodal framework respectively. In the unimodal framework, two types of dictionaries, i.e. joint dictionary and individual dictionary, are built by learning from prepared training samples. In the multimodal framework, a weighted fusion scheme is proposed to further highlight the contributions from features with higher separability. To validate the proposed approach, experiments were conducted to compare with three widely used features: Haar wavelets (HWs), histogram of oriented gradients (HOG), and histogram of phase congruency (HPC) as well as two classification methods, i.e. AdaBoost and support vector machine (SVM). Experimental results on a publicly available data set demonstrate the superiority of the proposed approach.

  4. Contingent approach to Internet-based supply network integration

    Science.gov (United States)

    Ho, Jessica; Boughton, Nick; Kehoe, Dennis; Michaelides, Zenon

    2001-10-01

    The Internet is playing an increasingly important role in enhancing the operations of supply networks as many organizations begin to recognize the benefits of Internet- enabled supply arrangements. However, the developments and applications to-date do not extend significantly beyond the dyadic model, whereas the real advantages are to be made with the external and network models to support a coordinated and collaborative based approach. The DOMAIN research group at the University of Liverpool is currently defining new Internet- enabled approaches to enable greater collaboration across supply chains. Different e-business models and tools are focusing on different applications. Using inappropriate e- business models, tools or techniques will bring negative results instead of benefits to all the tiers in the supply network. Thus there are a number of issues to be considered before addressing Internet based supply network integration, in particular an understanding of supply chain management, the emergent business models and evaluating the effects of deploying e-business to the supply network or a particular tier. It is important to utilize a contingent approach to selecting the right e-business model to meet the specific supply chain requirements. This paper addresses the issues and provides a case study on the indirect materials supply networks.

  5. An Ultrasound Image Despeckling Approach Based on Principle Component Analysis

    Directory of Open Access Journals (Sweden)

    Jawad F. Al-Asad

    2014-07-01

    Full Text Available An approach based on principle component analysis (PCA to filter out multiplicative noise from ultrasound images is presented in this paper. An image with speckle noise is segmented into small dyadic lengths, depending on the original size of the image, and the global covariance matrix is found. A projection matrix is then formed by selecting the maximum eigenvectors of the global covariance matrix. This projection matrix is used to filter speckle noise by projecting each segment into the signal subspace. The approach is based on the assumption that the signal and noise are independent and that the signal subspace is spanned by a subset of few principal eigenvectors. When applied on simulated and real ultrasound images, the proposed approach has outperformed some popular nonlinear denoising techniques such as 2D wavelets, 2D total variation filtering, and 2D anisotropic diffusion filtering in terms of edge preservation and maximum cleaning of speckle noise. It has also showed lower sensitivity to outliers resulting from the log transformation of the multiplicative noise.

  6. Feedback structure based entropy approach for multiple-model estimation

    Institute of Scientific and Technical Information of China (English)

    Shen-tu Han; Xue Anke; Guo Yunfei

    2013-01-01

    The variable-structure multiple-model (VSMM) approach, one of the multiple-model (MM) methods, is a popular and effective approach in handling problems with mode uncertainties. The model sequence set adaptation (MSA) is the key to design a better VSMM. However, MSA methods in the literature have big room to improve both theoretically and practically. To this end, we propose a feedback structure based entropy approach that could find the model sequence sets with the smallest size under certain conditions. The filtered data are fed back in real time and can be used by the minimum entropy (ME) based VSMM algorithms, i.e., MEVSMM. Firstly, the full Markov chains are used to achieve optimal solutions. Secondly, the myopic method together with particle filter (PF) and the challenge match algorithm are also used to achieve sub-optimal solutions, a trade-off between practicability and optimality. The numerical results show that the proposed algorithm provides not only refined model sets but also a good robustness margin and very high accuracy.

  7. Rigorous Description Of Design Components Functionality: An Approach Based Contract

    Directory of Open Access Journals (Sweden)

    Abdelhafid Zitouni

    2012-01-01

    Full Text Available Current models for software components have made component-based software engineering practical. However, these models are limited in the sense that their support for the characterization/specification of design components primarily deals with syntactic issues. To avoid mismatch and misuse of components, more comprehensive specification of software components is required, In this paper, we present a contract-based approach to analyze and model the both aspects (functional and non-functional properties of design components and their composition in order to detect and correct composition errors. This approach permits to characterize the structural, interface and behavioural aspects of design component. To enable this we present a pattern contract language that captures the structural and behavioral requirements associated with a range of patterns, as well as the system properties that are guaranteed as a result. In addition, we propose the use of the LOTOS language as an ADL for formalizing these aspects. We illustrate the approach by applying it to a standard design pattern.

  8. Nanotechnology-Based Approaches for Guiding Neural Regeneration.

    Science.gov (United States)

    Shah, Shreyas; Solanki, Aniruddh; Lee, Ki-Bum

    2016-01-19

    The mammalian brain is a phenomenal piece of "organic machinery" that has fascinated scientists and clinicians for centuries. The intricate network of tens of billions of neurons dispersed in a mixture of chemical and biochemical constituents gives rise to thoughts, feelings, memories, and life as we know it. In turn, subtle imbalances or damage to this system can cause severe complications in physical, motor, psychological, and cognitive function. Moreover, the inevitable loss of nerve tissue caused by degenerative diseases and traumatic injuries is particularly devastating because of the limited regenerative capabilities of the central nervous system (i.e., the brain and spinal cord). Among current approaches, stem-cell-based regenerative medicine has shown the greatest promise toward repairing and regenerating destroyed neural tissue. However, establishing controlled and reliable methodologies to guide stem cell differentiation into specialized neural cells of interest (e.g., neurons and oligodendrocytes) has been a prevailing challenge in the field. In this Account, we summarize the nanotechnology-based approaches our group has recently developed to guide stem-cell-based neural regeneration. We focus on three overarching strategies that were adopted to selectively control this process. First, soluble microenvironmental factors play a critical role in directing the fate of stem cells. Multiple factors have been developed in the form of small-molecule drugs, biochemical analogues, and DNA/RNA-based vectors to direct neural differentiation. However, the delivery of these factors with high transfection efficiency and minimal cytotoxicity has been challenging, especially to sensitive cell lines such as stem cells. In our first approach, we designed nanoparticle-based systems for the efficient delivery of such soluble factors to control neural differentiation. Our nanoparticles, comprising either organic or inorganic elements, were biocompatible and offered

  9. Nanotechnology-Based Approaches for Guiding Neural Regeneration.

    Science.gov (United States)

    Shah, Shreyas; Solanki, Aniruddh; Lee, Ki-Bum

    2016-01-19

    The mammalian brain is a phenomenal piece of "organic machinery" that has fascinated scientists and clinicians for centuries. The intricate network of tens of billions of neurons dispersed in a mixture of chemical and biochemical constituents gives rise to thoughts, feelings, memories, and life as we know it. In turn, subtle imbalances or damage to this system can cause severe complications in physical, motor, psychological, and cognitive function. Moreover, the inevitable loss of nerve tissue caused by degenerative diseases and traumatic injuries is particularly devastating because of the limited regenerative capabilities of the central nervous system (i.e., the brain and spinal cord). Among current approaches, stem-cell-based regenerative medicine has shown the greatest promise toward repairing and regenerating destroyed neural tissue. However, establishing controlled and reliable methodologies to guide stem cell differentiation into specialized neural cells of interest (e.g., neurons and oligodendrocytes) has been a prevailing challenge in the field. In this Account, we summarize the nanotechnology-based approaches our group has recently developed to guide stem-cell-based neural regeneration. We focus on three overarching strategies that were adopted to selectively control this process. First, soluble microenvironmental factors play a critical role in directing the fate of stem cells. Multiple factors have been developed in the form of small-molecule drugs, biochemical analogues, and DNA/RNA-based vectors to direct neural differentiation. However, the delivery of these factors with high transfection efficiency and minimal cytotoxicity has been challenging, especially to sensitive cell lines such as stem cells. In our first approach, we designed nanoparticle-based systems for the efficient delivery of such soluble factors to control neural differentiation. Our nanoparticles, comprising either organic or inorganic elements, were biocompatible and offered

  10. Rights-Based Approaches to Ensure Sustainable Nutrition Security.

    Science.gov (United States)

    Banerjee, Sweta

    2016-01-01

    In India, a rights-based approach has been used to address large-scale malnutrition, including both micro- and macro-level nutrition deficiencies. Stunting, which is an intergenerational chronic consequence of malnutrition, is especially widespread in India (38% among children under 5 years old). To tackle this problem, the government of India has designed interventions for the first 1,000 days, a critical period of the life cycle, through a number of community-based programs to fulfill the rights to food and life. However, the entitlements providing these rights have not yet produced the necessary changes in the malnutrition status of people, especially women and children. The government of India has already implemented laws and drafted a constitution that covers the needs of its citizens, but corruption, bureaucracy, lack of awareness of rights and entitlements and social discrimination limit people's access to basic rights and services. To address this crisis, Welthungerhilfe India, working in remote villages of the most backward states in India, has shifted from a welfare-based approach to a rights-based approach. The Fight Hunger First Initiative, started by Welthungerhilfe in 2011, is designed on the premise that in the long term, poor people can only leave poverty behind if adequate welfare systems are in place and if basic rights are fulfilled; these rights include access to proper education, sufficient access to adequate food and income, suitable health services and equal rights. Only then can the next generation of disadvantaged populations look forward to a new and better future and can growth benefit the entire society. The project, co-funded by the Federal Ministry for Economic Cooperation and Development, is a long-term multi-sectoral program that involves institution-building and empowerment. PMID:27198153

  11. Rights-Based Approaches to Ensure Sustainable Nutrition Security.

    Science.gov (United States)

    Banerjee, Sweta

    2016-01-01

    In India, a rights-based approach has been used to address large-scale malnutrition, including both micro- and macro-level nutrition deficiencies. Stunting, which is an intergenerational chronic consequence of malnutrition, is especially widespread in India (38% among children under 5 years old). To tackle this problem, the government of India has designed interventions for the first 1,000 days, a critical period of the life cycle, through a number of community-based programs to fulfill the rights to food and life. However, the entitlements providing these rights have not yet produced the necessary changes in the malnutrition status of people, especially women and children. The government of India has already implemented laws and drafted a constitution that covers the needs of its citizens, but corruption, bureaucracy, lack of awareness of rights and entitlements and social discrimination limit people's access to basic rights and services. To address this crisis, Welthungerhilfe India, working in remote villages of the most backward states in India, has shifted from a welfare-based approach to a rights-based approach. The Fight Hunger First Initiative, started by Welthungerhilfe in 2011, is designed on the premise that in the long term, poor people can only leave poverty behind if adequate welfare systems are in place and if basic rights are fulfilled; these rights include access to proper education, sufficient access to adequate food and income, suitable health services and equal rights. Only then can the next generation of disadvantaged populations look forward to a new and better future and can growth benefit the entire society. The project, co-funded by the Federal Ministry for Economic Cooperation and Development, is a long-term multi-sectoral program that involves institution-building and empowerment.

  12. Molecular Marke rs in Conservation of the Breeds

    Directory of Open Access Journals (Sweden)

    C. C. Berkman

    2005-01-01

    Full Text Available Many native breeds are facing the problem of extinction. Therefore, urgently, genetic diversity ofbreeds must be studied and the results must be employed to find out the conservation priority of the breeds .Microsatellites and mtDNA sequences are the two types of genetic markers that have been found useful andhave been employed widely in the studies revealing the genetic diversity of closely related populations.Studies based on these markers, in parallel to Archeological findings , indicated that the native Turkish cattle,goat and sheep breeds are close to one of the centers of domestication. Therefore, it is highly likely that thesebreeds are harboring potential genetic information to be utilized in the future. Hence, they must have highpriority in conservation on the global scale. Again, genetic studies indicated that, morphological characters ofthe breeds may give incomplete/wrong informat ion about the evolutionary history of the breeds.Furthermore, genetic studies indicated that, before the prioritizat ion of the breeds in conservation, first thegroup of breeds having the same evolutionary history must be determined. For this, breeds must be examinedwith respect to several types of genetic markers, differing in their modes of inheritance. Recently, todetermine the conservation priorities of the breeds, new methods, using various criteria, such as: geneticdistinctness, genetic diversity level, adaptation to special environmental conditions, risk of ext inction of thebreed, are being developed. Yet, they are not fully developed.Lastly, it is well known that breeds loose genetic informat ion as they go from one generation to thenext. Simulation studies, give insights about how to minimize this inevitable genetic loss by using molecularmarkers. However, at the current stage of technology, employment of the emerging rules are very expensive.

  13. APPROACH ON INTELLIGENT OPTIMIZATION DESIGN BASED ON COMPOUND KNOWLEDGE

    Institute of Scientific and Technical Information of China (English)

    Yao Jianchu; Zhou Ji; Yu Jun

    2003-01-01

    A concept of an intelligent optimal design approach is proposed, which is organized by a kind of compound knowledge model. The compound knowledge consists of modularized quantitative knowledge, inclusive experience knowledge and case-based sample knowledge. By using this compound knowledge model, the abundant quantity information of mathematical programming and the symbolic knowledge of artificial intelligence can be united together in this model. The intelligent optimal design model based on such a compound knowledge and the automatically generated decomposition principles based on it are also presented. Practically, it is applied to the production planning, process schedule and optimization of production process of a refining & chemical work and a great profit is achieved. Specially, the methods and principles are adaptable not only to continuous process industry, but also to discrete manufacturing one.

  14. Scattered Data Processing Approach Based on Optical Facial Motion Capture

    Directory of Open Access Journals (Sweden)

    Qiang Zhang

    2013-01-01

    Full Text Available In recent years, animation reconstruction of facial expressions has become a popular research field in computer science and motion capture-based facial expression reconstruction is now emerging in this field. Based on the facial motion data obtained using a passive optical motion capture system, we propose a scattered data processing approach, which aims to solve the common problems of missing data and noise. To recover missing data, given the nonlinear relationships among neighbors with the current missing marker, we propose an improved version of a previous method, where we use the motion of three muscles rather than one to recover the missing data. To reduce the noise, we initially apply preprocessing to eliminate impulsive noise, before our proposed three-order quasi-uniform B-spline-based fitting method is used to reduce the remaining noise. Our experiments showed that the principles that underlie this method are simple and straightforward, and it delivered acceptable precision during reconstruction.

  15. A New Design Approach to game or play based learning

    DEFF Research Database (Denmark)

    Larsen, Lasse Juel

    Abstract: The present paper proposes a new design perspective for game based learning. The general idea is to abandon the long and sought after dream of designing a closed learning system, where students from elementary school to high school without teachers’ interference could learn whatever...... game based learning system, but also confront aspects of modern learning theory especially the notion of reference between content of an assignment and the reality with which it should or could be connected (situated learning). The second idea promotes a way to tackle the common experience...... to ground the students sense of meaning. This paper proposes another approach: using visualization in immersive 3D-worlds as documentation of learning progress while at the same time constituting a reward system which motivate further learning. The overall design idea is to build a game based learning...

  16. A Brief Summary of Dictionary Learning Based Approach for Classification

    CERN Document Server

    Shu, Kong

    2012-01-01

    This note presents some representative methods which are based on dictionary learning (DL) for classification. We do not review the sophisticated methods or frameworks that involve DL for classification, such as online DL and spatial pyramid matching (SPM), but rather, we concentrate on the direct DL-based classification methods. Here, the "so-called direct DL-based method" is the approach directly deals with DL framework by adding some meaningful penalty terms. By listing some representative methods, we can roughly divide them into two categories, i.e. (1) directly making the dictionary discriminative and (2) forcing the sparse coefficients discriminative to push the discrimination power of the dictionary. From this taxonomy, we can expect some extensions of them as future researches.

  17. An Efficient Fuzzy Clustering-Based Approach for Intrusion Detection

    CERN Document Server

    Nguyen, Huu Hoa; Darmont, Jérôme

    2011-01-01

    The need to increase accuracy in detecting sophisticated cyber attacks poses a great challenge not only to the research community but also to corporations. So far, many approaches have been proposed to cope with this threat. Among them, data mining has brought on remarkable contributions to the intrusion detection problem. However, the generalization ability of data mining-based methods remains limited, and hence detecting sophisticated attacks remains a tough task. In this thread, we present a novel method based on both clustering and classification for developing an efficient intrusion detection system (IDS). The key idea is to take useful information exploited from fuzzy clustering into account for the process of building an IDS. To this aim, we first present cornerstones to construct additional cluster features for a training set. Then, we come up with an algorithm to generate an IDS based on such cluster features and the original input features. Finally, we experimentally prove that our method outperform...

  18. A Roles-based Approach To Variable-oriented Programming

    Directory of Open Access Journals (Sweden)

    Juha Sorva

    2008-01-01

    Full Text Available Delocalized variable plans pose problems for novice programmers trying to read and write programs. Variable-oriented programming is a programming paradigm that emphasizes the importance of variable-related plans, and localizes actions pertaining to each variable together in one place in the program code. This paper revisits the idea of variable-oriented programming and shows how it can be founded on roles of variables: stereotypes of variable use suitable for teaching to novices. The paper sketches out how variable-oriented, roles-based programming could be implemented using either a new programming language or a framework built on an existing language. The possible applications, merits, and problems of a roles-based approach, and variable-oriented programming in general, are discussed. This paper points toward possible research directions for the future and provides a basis for further discussions of variable-oriented, roles-based programming.

  19. A Component Based Approach to Scientific Workflow Management

    CERN Document Server

    Le Goff, Jean-Marie; Baker, Nigel; Brooks, Peter; McClatchey, Richard

    2001-01-01

    CRISTAL is a distributed scientific workflow system used in the manufacturing and production phases of HEP experiment construction at CERN. The CRISTAL project has studied the use of a description driven approach, using meta- modelling techniques, to manage the evolving needs of a large physics community. Interest from such diverse communities as bio-informatics and manufacturing has motivated the CRISTAL team to re-engineer the system to customize functionality according to end user requirements but maximize software reuse in the process. The next generation CRISTAL vision is to build a generic component architecture from which a complete software product line can be generated according to the particular needs of the target enterprise. This paper discusses the issues of adopting a component product line based approach and our experiences of software reuse.

  20. A Survey on Trust-Based Web Service Provision Approaches

    DEFF Research Database (Denmark)

    Dragoni, Nicola

    2010-01-01

    The basic tenet of Service-Oriented Computing (SOC) is the possibility of building distributed applications on the Web by using Web Services as fundamental building blocks. The proliferation of such services is considered the second wave of evolution in the Internet age, moving the Web from...... a collection of pages to a collections of services. Consensus is growing that this Web Service “revolution” won't eventuate until we resolve trust-related issues. Indeed, the intrinsic openness of the SOC vision makes crucial to locate useful services and recognize them as trustworthy. In this paper we review...... the field of trust-based Web Service selection, providing a structured classification of current approaches and highlighting the main limitations of each class and of the overall field. As a result, we claim that a soft notion of trust lies behind such weaknesses and we advocate the need of a new approach...

  1. Evolutionary modeling-based approach for model errors correction

    Science.gov (United States)

    Wan, S. Q.; He, W. P.; Wang, L.; Jiang, W.; Zhang, W.

    2012-08-01

    The inverse problem of using the information of historical data to estimate model errors is one of the science frontier research topics. In this study, we investigate such a problem using the classic Lorenz (1963) equation as a prediction model and the Lorenz equation with a periodic evolutionary function as an accurate representation of reality to generate "observational data." On the basis of the intelligent features of evolutionary modeling (EM), including self-organization, self-adaptive and self-learning, the dynamic information contained in the historical data can be identified and extracted by computer automatically. Thereby, a new approach is proposed to estimate model errors based on EM in the present paper. Numerical tests demonstrate the ability of the new approach to correct model structural errors. In fact, it can actualize the combination of the statistics and dynamics to certain extent.

  2. Modeling of Heterogeneous Objects: An Approach Based on Implicit Functions

    Directory of Open Access Journals (Sweden)

    Miller Gómez-Mora

    2016-02-01

    Full Text Available Modeling objects, their properties and relations is an important topic in computer science. In this sense, this research contributes to the framework of heterogeneous solid modeling, as well as the popular and intricate study of implicit solid representation. The approach presented here is broad and generic, but this article will focus on bio-CAD models, alluding to the existing extension and implementation in other fields. The overall aim of this work is to demonstrate that solid models of heterogeneous object can be built implicitly. This is shown to have promise in practical applications from biomedical computing to computer animation and engineering. The approach adopted here is based on the observation that current solid models cannot intrinsically represent multiphase geometric information along with the attribute information. This makes necessary to explore new modeling techniques in order to represent real-world objects. The availability of such modeling techniques remains central to the design, analysis, and fabrication of heterogeneous objects

  3. Alcoholism and its Effects: an Approach Based on Health Psychology

    Directory of Open Access Journals (Sweden)

    Maria de las Mercedes Pretel Olite

    2014-11-01

    Full Text Available Alcoholism is a complex biopsychosocial disorder that requires a specialised and multidisciplinary approach focusing on both the patient and the family. Alcohol consumption is the most important addiction worldwide due to its prevalence and impact. Therefore, the main objective of a primary care physician should be to facilitate the referral of patients and their families to a structured treatment, support and guidance program during the whole detoxification process. In every health area in Cienfuegos, there are community mental health centers with a staff trained to deal with these disorders in addicts and their family. A literature review was conducted to establish the relationship between alcohol consumption and its harmful effects on health, family and society, using an approach based on Health Psychology.

  4. A Systems-Based Approach to Intelligence Reform

    Directory of Open Access Journals (Sweden)

    Austen Givens

    2012-01-01

    Full Text Available The terrorist attacks of September 11, 2001 prompted the most comprehensive changes to the U.S. Intelligence Community (IC since its creation via the National Security Act of 1947. Recent structural and organizational reforms, such as efforts to enhance information sharing and recruit speakers of hard-target languages, have also triggered new challenges to successful transformation. In light of the systemic problems facing the IC, this paper argues that systems engineering, a discipline increasingly useful in organizational change, offers a more efficient, holistic approach to the intelligence reform process than the status quo. Systems engineering views the IC as an integrated and interdependent system, whose value is primarily realized through the relationship among its components. The author makes the case that a systems-based approach to intelligence reform can enhance effectiveness while reducing the risk of unintended consequences.

  5. Market-Based Approach to Mobile Surveillance Systems

    Directory of Open Access Journals (Sweden)

    Ahmed M. Elmogy

    2012-01-01

    Full Text Available The active surveillance of public and private sites is increasingly becoming a very important and critical issue. It is, therefore, imperative to develop mobile surveillance systems to protect these sites. Modern surveillance systems encompass spatially distributed mobile and static sensors in order to provide effective monitoring of persistent and transient objects and events in a given area of interest (AOI. The realization of the potential of mobile surveillance requires the solution of different challenging problems such as task allocation, mobile sensor deployment, multisensor management, cooperative object detection and tracking, decentralized data fusion, and interoperability and accessibility of system nodes. This paper proposes a market-based approach that can be used to handle different problems of mobile surveillance systems. Task allocation and cooperative target tracking are studied using the proposed approach as two challenging problems of mobile surveillance systems. These challenges are addressed individually and collectively.

  6. Automatic Facial Expression Recognition Based on Hybrid Approach

    Directory of Open Access Journals (Sweden)

    Ali K. K. Bermani

    2012-12-01

    Full Text Available The topic of automatic recognition of facial expressions deduce a lot of researchers in the late last century and has increased a great interest in the past few years. Several techniques have emerged in order to improve the efficiency of the recognition by addressing problems in face detection and extraction features in recognizing expressions. This paper has proposed automatic system for facial expression recognition which consists of hybrid approach in feature extraction phase which represent a combination between holistic and analytic approaches by extract 307 facial expression features (19 features by geometric, 288 feature by appearance. Expressions recognition is performed by using radial basis function (RBF based on artificial neural network to recognize the six basic emotions (anger, fear, disgust, happiness, surprise, sadness in addition to the natural.The system achieved recognition rate 97.08% when applying on person-dependent database and 93.98% when applying on person-independent.

  7. Evolutionary modeling-based approach for model errors correction

    Directory of Open Access Journals (Sweden)

    S. Q. Wan

    2012-08-01

    Full Text Available The inverse problem of using the information of historical data to estimate model errors is one of the science frontier research topics. In this study, we investigate such a problem using the classic Lorenz (1963 equation as a prediction model and the Lorenz equation with a periodic evolutionary function as an accurate representation of reality to generate "observational data."

    On the basis of the intelligent features of evolutionary modeling (EM, including self-organization, self-adaptive and self-learning, the dynamic information contained in the historical data can be identified and extracted by computer automatically. Thereby, a new approach is proposed to estimate model errors based on EM in the present paper. Numerical tests demonstrate the ability of the new approach to correct model structural errors. In fact, it can actualize the combination of the statistics and dynamics to certain extent.

  8. An Agent Based approach to design Serious Game

    Directory of Open Access Journals (Sweden)

    Manuel Gentile

    2014-06-01

    Full Text Available Serious games are designed to train and educate learners, opening up new learning approaches like exploratory learning and situated cognition.  Despite growing interest in these games, their design is still an artisan process.On the basis of experiences in designing computer simulation, this paper proposes an agent-based approach to guide the design process of a serious game. The proposed methodology allows the designer to strike the right equilibrium between educational effectiveness and entertainment, realism and complexity.The design of the PNPVillage game is used as a case study. The PNPVillage game aims to introduce and foster an entrepreneurial mindset among young students. It was implemented within the framework of the European project “I  can… I cannot… I go!” Rev.2

  9. A Cloud-based Approach to Medical NLP

    Science.gov (United States)

    Chard, Kyle; Russell, Michael; Lussier, Yves A.; Mendonça, Eneida A; Silverstein, Jonathan C.

    2011-01-01

    Natural Language Processing (NLP) enables access to deep content embedded in medical texts. To date, NLP has not fulfilled its promise of enabling robust clinical encoding, clinical use, quality improvement, and research. We submit that this is in part due to poor accessibility, scalability, and flexibility of NLP systems. We describe here an approach and system which leverages cloud-based approaches such as virtual machines and Representational State Transfer (REST) to extract, process, synthesize, mine, compare/contrast, explore, and manage medical text data in a flexibly secure and scalable architecture. Available architectures in which our Smntx (pronounced as semantics) system can be deployed include: virtual machines in a HIPAA-protected hospital environment, brought up to run analysis over bulk data and destroyed in a local cloud; a commercial cloud for a large complex multi-institutional trial; and within other architectures such as caGrid, i2b2, or NHIN. PMID:22195072

  10. Classification approach based on association rules mining for unbalanced data

    CERN Document Server

    Ndour, Cheikh

    2012-01-01

    This paper deals with the supervised classification when the response variable is binary and its class distribution is unbalanced. In such situation, it is not possible to build a powerful classifier by using standard methods such as logistic regression, classification tree, discriminant analysis, etc. To overcome this short-coming of these methods that provide classifiers with low sensibility, we tackled the classification problem here through an approach based on the association rules learning because this approach has the advantage of allowing the identification of the patterns that are well correlated with the target class. Association rules learning is a well known method in the area of data-mining. It is used when dealing with large database for unsupervised discovery of local patterns that expresses hidden relationships between variables. In considering association rules from a supervised learning point of view, a relevant set of weak classifiers is obtained from which one derives a classification rule...

  11. NEW APPROACH FOR IMAGE REPRESENTATION BASED ON GEOMETRIC STRUCTURAL CONTENTS

    Institute of Scientific and Technical Information of China (English)

    Jia Xiaomeng; Wang Guoyu

    2003-01-01

    This paper presents a novel approach for representation of image contents based on edge structural features. Edge detection is carried out for an image in the pre-processing stage.For feature representation, edge pixels are grouped into a set of segments through geometrical partitioning of the whole edge image. Then the invariant feature vector is computed for each edge-pixel segment. Thereby the image is represented with a set of spatially distributed feature vectors, each of which describes the local pattern of edge structures. Matching of two images can be achieved by the correspondence of two sets of feature vectors. Without the difficulty of image segmentation and object extraction due to the complexity of the real world images, the proposed approach provides a simple and flexible description for the image with complex scene, in terms of structural features of the image content. Experiments with real images illustrate the effectiveness of this new method.

  12. Is cross-breeding of cattle beneficial for the environment? The case of mixed farming systems in Central Java, Indonesia

    NARCIS (Netherlands)

    Widi, T.S.M.; Udo, H.M.J.; Oldenbroek, J.K.; Budisatria, I.G.S.; Baliarti, E.; Viets, T.C.; Zijpp, van der A.J.

    2015-01-01

    Cross-breeding with European beef breeds has become a standard approach for the intensification of smallholder cattle production in Indonesia. This study assessed the environmental impact of cross-breeding, in terms of Global Warming Potential (GWP) and land use. We sampled 90 local Ongole and 162 c

  13. A graph-based approach for designing extensible pipelines

    Directory of Open Access Journals (Sweden)

    Rodrigues Maíra R

    2012-07-01

    Full Text Available Abstract Background In bioinformatics, it is important to build extensible and low-maintenance systems that are able to deal with the new tools and data formats that are constantly being developed. The traditional and simplest implementation of pipelines involves hardcoding the execution steps into programs or scripts. This approach can lead to problems when a pipeline is expanding because the incorporation of new tools is often error prone and time consuming. Current approaches to pipeline development such as workflow management systems focus on analysis tasks that are systematically repeated without significant changes in their course of execution, such as genome annotation. However, more dynamism on the pipeline composition is necessary when each execution requires a different combination of steps. Results We propose a graph-based approach to implement extensible and low-maintenance pipelines that is suitable for pipeline applications with multiple functionalities that require different combinations of steps in each execution. Here pipelines are composed automatically by compiling a specialised set of tools on demand, depending on the functionality required, instead of specifying every sequence of tools in advance. We represent the connectivity of pipeline components with a directed graph in which components are the graph edges, their inputs and outputs are the graph nodes, and the paths through the graph are pipelines. To that end, we developed special data structures and a pipeline system algorithm. We demonstrate the applicability of our approach by implementing a format conversion pipeline for the fields of population genetics and genetic epidemiology, but our approach is also helpful in other fields where the use of multiple software is necessary to perform comprehensive analyses, such as gene expression and proteomics analyses. The project code, documentation and the Java executables are available under an open source license at http

  14. Big Data Analytics in Immunology: A Knowledge-Based Approach

    Directory of Open Access Journals (Sweden)

    Guang Lan Zhang

    2014-01-01

    Full Text Available With the vast amount of immunological data available, immunology research is entering the big data era. These data vary in granularity, quality, and complexity and are stored in various formats, including publications, technical reports, and databases. The challenge is to make the transition from data to actionable knowledge and wisdom and bridge the knowledge gap and application gap. We report a knowledge-based approach based on a framework called KB-builder that facilitates data mining by enabling fast development and deployment of web-accessible immunological data knowledge warehouses. Immunological knowledge discovery relies heavily on both the availability of accurate, up-to-date, and well-organized data and the proper analytics tools. We propose the use of knowledge-based approaches by developing knowledgebases combining well-annotated data with specialized analytical tools and integrating them into analytical workflow. A set of well-defined workflow types with rich summarization and visualization capacity facilitates the transformation from data to critical information and knowledge. By using KB-builder, we enabled streamlining of normally time-consuming processes of database development. The knowledgebases built using KB-builder will speed up rational vaccine design by providing accurate and well-annotated data coupled with tailored computational analysis tools and workflow.

  15. A web-based approach to data imputation

    KAUST Repository

    Li, Zhixu

    2013-10-24

    In this paper, we present WebPut, a prototype system that adopts a novel web-based approach to the data imputation problem. Towards this, Webput utilizes the available information in an incomplete database in conjunction with the data consistency principle. Moreover, WebPut extends effective Information Extraction (IE) methods for the purpose of formulating web search queries that are capable of effectively retrieving missing values with high accuracy. WebPut employs a confidence-based scheme that efficiently leverages our suite of data imputation queries to automatically select the most effective imputation query for each missing value. A greedy iterative algorithm is proposed to schedule the imputation order of the different missing values in a database, and in turn the issuing of their corresponding imputation queries, for improving the accuracy and efficiency of WebPut. Moreover, several optimization techniques are also proposed to reduce the cost of estimating the confidence of imputation queries at both the tuple-level and the database-level. Experiments based on several real-world data collections demonstrate not only the effectiveness of WebPut compared to existing approaches, but also the efficiency of our proposed algorithms and optimization techniques. © 2013 Springer Science+Business Media New York.

  16. Online approach to feature interaction problems in middleware based system

    Institute of Scientific and Technical Information of China (English)

    HUANG Gang; LIU XuanZhe; MEI Hong

    2008-01-01

    As a popular infrastructure for distributed systems running on the Internet, middle-ware has to support much more diverse and complex interactions for coping with the drastically increasing demand on information technology and the extremely open and dynamic nature of the Internet. These supporting mechanisms facilitate the development, deployment, and integration of distributed systems, as well as increase the occasions for distributed systems to interact in an undesired way. The undesired interactions may cause serious problems, such as quality violation, function loss, and even system crash. In this paper, the problem is studied from the perspective of the feature interaction problem (FIP) in telecom, and an online ap-proach to the detection and solution on runtime systems is proposed. Based on a classification of middleware enabled interactions, the existence of FIP in middle-ware based systems is illustrated by four real cases and a conceptual comparison between middleware based systems and telecom systems. After that, runtime soft-ware architecture is employed to facilitate the online detection and solution of FIP. The approach is demonstrated on J2EE (Java 2 Platform Enterprise Edition) and applied to detect and resolve all of the four real cases.

  17. COPULA BASED VaR APPROACH FOR EUROPEAN STOCKS PORTFOLIO

    Directory of Open Access Journals (Sweden)

    Mária Bohdalová

    2013-06-01

    Full Text Available The paper gives stochastic assessments of the financial crisis and discusses the Value at Risk European stocks from the point of view of copula based approach. Copula techniques can be based on the connection between rank correlation and certain one–parameter bivariate copulas. This relation allows easy calibration of the parameters. We use more general numerical calibration techniques that are based on maximum likelihood estimation (MLE. Using this approach we want to estimate VaR of the EU stocks portfolio using Monte Carlo simulation. The focus will be on modelling the interdependence between two risk factor returns. We suppose that the risk factor returns have some assumed marginal distributions, which need not be identical, and their dependency is modelled with copulas. We find that standard parametric copula functions (such as Gaussian are not able to provide a good fit to the data. This is especially true when one or more of the marginal distributions has fat tails. We overcome this problem by fitting a t–copula with different marginal which can approximate any possible shape for the joint density.

  18. Big data analytics in immunology: a knowledge-based approach.

    Science.gov (United States)

    Zhang, Guang Lan; Sun, Jing; Chitkushev, Lou; Brusic, Vladimir

    2014-01-01

    With the vast amount of immunological data available, immunology research is entering the big data era. These data vary in granularity, quality, and complexity and are stored in various formats, including publications, technical reports, and databases. The challenge is to make the transition from data to actionable knowledge and wisdom and bridge the knowledge gap and application gap. We report a knowledge-based approach based on a framework called KB-builder that facilitates data mining by enabling fast development and deployment of web-accessible immunological data knowledge warehouses. Immunological knowledge discovery relies heavily on both the availability of accurate, up-to-date, and well-organized data and the proper analytics tools. We propose the use of knowledge-based approaches by developing knowledgebases combining well-annotated data with specialized analytical tools and integrating them into analytical workflow. A set of well-defined workflow types with rich summarization and visualization capacity facilitates the transformation from data to critical information and knowledge. By using KB-builder, we enabled streamlining of normally time-consuming processes of database development. The knowledgebases built using KB-builder will speed up rational vaccine design by providing accurate and well-annotated data coupled with tailored computational analysis tools and workflow.

  19. RosBREED: Enabling marker-assisted breeding in Rosaceae

    NARCIS (Netherlands)

    Iezzoni, A.F.; Weebadde, C.; Luby, J.; Yue, C.; Weg, van de W.E.; Fazio, G.; Main, D.; Peace, C.P.; Bassil, N.V.; McFerson, J.

    2010-01-01

    Genomics research has not yet been translated into routine practical application in breeding Rosaceae fruit crops (peach, apple, strawberry, cherry, apricot, pear, raspberry, etc.). Through dedicated efforts of many researchers worldwide, a wealth of genomics resources has accumulated, including EST

  20. 基于能繁母猪存栏量和猪粮价比的猪肉价格预报%Pork price forecast based on breeding sow stocks and hog-grain price ratio

    Institute of Scientific and Technical Information of China (English)

    孙建明

    2013-01-01

      Hog market is full competitive in China. There are obvious and regular cyclical feature in the fluctuation of pork price. Since 2003, pork prices have experienced over two full cycles, the time intervals between the adjacent price valleys are 36 months and 41 months, and the lengths between the adjacent price peak are 41 months and 43 months. Taking both price peak and valley intervals into account, the average length of the cycles is approximately 40 months. Hog production has its own specific regularity that producers enlarge their production scales when profit rate increases, reduce scales in contrast. Breeding sow stocks are the keys of the hog production scale changes. Increase or decrease of breeding sow stock will cause pork supply changes in 10 months because of the rules of hog production. Granger causality test results show that current pork price and current hog-grain price ratio are unidirectional Granger causality to current breeding sow stocks, breeding sow stocks and hog-grain price ratios 10 months ago are unidirectional Granger causality to current pig prices. The contribution of this paper is the multiplicative pork price forecast models which synthesize seasonal factor, trend factor and cyclical factor based on breeding sow stock deviations and hog-grain price ratio deviation 10 months ago. Long term trend equation of pork price is a linear function of time. By using least squares method and pork price time series data, the trend equation parameters can be obtained. The calculations of each month pork price devided by the Feb pork price in the same year separately are the seasonal factor values in one year. Averaging the same month seasonal factors of different years, we get seasonal pork price feature curve, fit the curve with a sine function in which the length of cycle is 12 months. Deviding real pork prices by long term trend prices and seasonal feature fitting values of the same month, cyclical factor curve is obtained. The cyclical

  1. Mutation breeding by ion implantation

    Science.gov (United States)

    Yu, Zengliang; Deng, Jianguo; He, Jianjun; Huo, Yuping; Wu, Yuejin; Wang, Xuedong; Lui, Guifu

    1991-07-01

    Ion implantation as a new mutagenic method has been used in the rice breeding program since 1986, and for mutation breeding of other crops later. It has been shown, in principle and in practice, that this method has many outstanding advantages: lower damage rate; higher mutation rate and wider mutational spectrum. Many new lines of rice with higher yield rate; broader disease resistance; shorter growing period but higher quality have been bred from ion beam induced mutants. Some of these lines have been utilized for the intersubspecies hybridization. Several new lines of cotton, wheat and other crops are now in breeding. Some biophysical effects of ion implantation for crop seeds have been studied.

  2. The Utility of Synthetic-based Approach of Writing among Iranian EFL Learners

    Directory of Open Access Journals (Sweden)

    Nasrin Derakhshandeh

    2014-05-01

    Full Text Available The present study intends to examine the utility of synthetic-based approach versus traditional approaches of writing among Iranian EFL learners. To achieve this end, ninety students at Upper-Intermediate level were randomly chosen from the English population of Kish and Gooyesh English Institutes. The students were divided into three groups. Group1 was asked to do a writing task based on product-based approach. A writing task based on process-oriented approach was administered to Group2; later on, Group 3 was invited to write a composition to assess their performance based on synthetic-based approach. The result of the t test and two-way ANOVA revealed that the students performed better in writing using synthetic approach rather than traditional approaches to writing. Keywords: EFL writing proficiency, Product-based approach, Process-based approach, Synthetic-based approach

  3. Safflower: genetics and breeding

    International Nuclear Information System (INIS)

    A review of genetic studies related to the breeding of improved cultivars of safflower (Carthamus tinctorius L.) indicated that it was possible to modify the following over a wide range: duration of the rosette stage, stem length, branching habit, degree of spininess, head number, head size, flower morphology, mating system, seed size, hull thickness and thereby oil and protein contents, and fatty acid composition of the oil. Safflower breeders have concentrated most of their efforts on identifying and evaluating the great range of variability in cultivated safflower and its closely related wild species, and not on exploring means to increase variability. Limited experiments with gamma rays and ethyl methanesulphonate indicated that additional variability could be induced. Mutagenic agents should be used to obtain the following: resistance to foliar diseases where resistant germplasm is not available, increased levels of resistance to Phytophthora root rot, resistance to dodder and orobanche, resistance to insect pests, earlier maturity, and additional modifications in the fatty acid composition of the oil. (author)

  4. Mutation breeding in chickpea

    International Nuclear Information System (INIS)

    Chickpea is an important food legume in Turkey. Turkey is one of the most important gene centers in the world for legumes. Realizing the potential of induced mutations, a mutation breeding programme was initiated at the Nuclear Agriculture Section of the Saraykoy Nuclear Research and Training Center in 1994. The purpose of the study was to obtain high yielding chickpea mutants with large seeds, good cooking quality and high protein content. Beside this some characters such as higher adaptation ability, tolerant to cold and drought, increased machinery harvest type, higher yield, resistant to diseases especially to antracnose and pest were investigated too. Parent varieties were ILC-482, AK-7114 and AKCIN-91 had been used in these experiments. The irradiation doses were 0 (control), 50, 100, 150, 200, 250, 300, 350 and 400 Gy for field experiments, respectively. As a result of these experiments, two promising mutant lines were chosen and given to the Seed Registration and Certification Center for official registration These two promising mutants were tested at five different locations of Turkey, in 2004 and 2005 years. After 2 years of registration experiments one of outstanding mutants was officially released as mutant chickpea variety under the name TAEK-SAGEL, in 2006. Some basic characteristics of this mutant are; earliness (95-100 day), high yield capacity (180-220 kg/da), high seed protein (22-25 %), first pot height (20-25 cm), 100 seeds weight (42-48 g), cooking time (35-40 min) and resistance to Ascochyta blight.

  5. Conceptual modelling approach of mechanical products based on functional surface

    Institute of Scientific and Technical Information of China (English)

    2007-01-01

    A modelling framework based on functional surface is presented to support conceptual design of mechanical products. The framework organizes product information in an abstract and multilevel manner. It consists of two mapping processes: function decomposition process and form reconstitution process. The steady mapping relationship from function to form (function-functional surface-form) is realized by taking functional surface as the middle layer. It farthest reduces the possibilities of combinatorial explosion that can occur during function decomposition and form reconstitution. Finally, CAD tools are developed and an auto-bender machine is applied to demonstrate the proposed approach.

  6. A Wavelet-Based Approach to Fall Detection

    OpenAIRE

    Luca Palmerini; Fabio Bagalà; Andrea Zanetti; Jochen Klenk; Clemens Becker; Angelo Cappello

    2015-01-01

    Falls among older people are a widely documented public health problem. Automatic fall detection has recently gained huge importance because it could allow for the immediate communication of falls to medical assistance. The aim of this work is to present a novel wavelet-based approach to fall detection, focusing on the impact phase and using a dataset of real-world falls. Since recorded falls result in a non-stationary signal, a wavelet transform was chosen to examine fall patterns. The idea ...

  7. Block-based approach to modelling of granulated fertilizers' quality

    DEFF Research Database (Denmark)

    Kohonen, J.; Reinikainen, S. P.; Høskuldsson, Agnar

    2009-01-01

    Fertilizer manufacturing is a customer-driven industry, where the quality of a product is a key factor in order to survive the competition. However, measuring the most important feature with granulated fertilizers, flowability, is tedious, time-consuming and thus expensive. Flowability can...... to observe the different effect of the blocks on the modelling task. The present approach is based on priority PLS and multi-block PLS. The data is measured from the final product and is divided into blocks between physical properties, such as granule hardness and roundness, chemical composition and particle...

  8. Study of Face Recognition Approach Based on Similarity Measures

    Directory of Open Access Journals (Sweden)

    Noha Aboelwafa

    2012-09-01

    Full Text Available Detecting the similarity of face image aims to determine the image of a face for verification purpose of documents such as passport, driving license, ID cards, etc. A new approach for face recognition based on similarity measure method is introduced. In addition, We apply various measure classes to increase the efficiency of the proposed method. The properties, sensitivity and effectiveness of the proposed measures are investigated and tested on 400 images from the ORL face database. Experimental results show that these similarity measures can give an useful way for measuring the similarity between fuzzy sets.

  9. Control system of motivation of personal based on gradient approach

    Directory of Open Access Journals (Sweden)

    Doliatovskii Valerii Anastasievich

    2014-07-01

    Full Text Available The concept of management by motivation of workers on the basis of definition of sensitivity of results of work to influence various motives is proved. There by the object of management is identified by a set of indicators of sensitivity which are the limiting sizes defining reaction of workers on motives. By averaging of the given questionnaires the matrix of identification of system of motivation is received. On its basis the decision of direct and return problems of management is possible. Experimental data about results of application are led to a choice of system of motivation based on gradient the approach.

  10. Reconfigurable diplexer based on switched delay line approach

    DEFF Research Database (Denmark)

    Zhurbenko, Vitaliy; Acar, Öncel; Ruaro, Andrea;

    2013-01-01

    In this work, a concept for the realization of a reconfigurable microwave multiplexer based on a switched delay-line topology is presented. The multiplexing concept is studied by considering a diplexer example. The topology provides two times reduction in the number of filters in comparison to the...... conventional directional filter approach. The switched delay-line topology enables the lossy and nonlinear switching elements to be used as a part of the coupling elements rather than within the resonators. Therefore, the diplexer potentially allows for a low insertion loss and high linearity. In addition...

  11. An RBF-PSO based approach for modeling prostate cancer

    Science.gov (United States)

    Perracchione, Emma; Stura, Ilaria

    2016-06-01

    Prostate cancer is one of the most common cancers in men; it grows slowly and it could be diagnosed in an early stage by dosing the Prostate Specific Antigen (PSA). However, a relapse after the primary therapy could arise in 25 - 30% of cases and different growth characteristics of the new tumor are observed. In order to get a better understanding of the phenomenon, a two parameters growth model is considered. To estimate the parameters values identifying the disease risk level a novel approach, based on combining Particle Swarm Optimization (PSO) with meshfree interpolation methods, is proposed.

  12. Statistically Based Approach to Broadband Liner Design and Assessment

    Science.gov (United States)

    Nark, Douglas M. (Inventor); Jones, Michael G. (Inventor)

    2016-01-01

    A broadband liner design optimization includes utilizing in-duct attenuation predictions with a statistical fan source model to obtain optimum impedance spectra over a number of flow conditions for one or more liner locations in a bypass duct. The predicted optimum impedance information is then used with acoustic liner modeling tools to design liners having impedance spectra that most closely match the predicted optimum values. Design selection is based on an acceptance criterion that provides the ability to apply increasing weighting to specific frequencies and/or operating conditions. One or more broadband design approaches are utilized to produce a broadband liner that targets a full range of frequencies and operating conditions.

  13. Scapular dyskinesia: evolution towards a systems-based approach.

    Science.gov (United States)

    Willmore, Elaine G; Smith, Michael J

    2016-01-01

    Historically, scapular dyskinesia has been used to describe an isolated clinical entity whereby an abnormality in positioning, movement or function of the scapula is present. Based upon this, treatment approaches have focused on addressing local isolated muscle activity. Recently, however, there has been a progressive move towards viewing the scapula as being part of a wider system of movement that is regulated and controlled by multiple factors, including the wider kinetic chain and individual patient-centred requirements. We therefore propose a paradigm shift whereby scapular dyskinesia is seen not in isolation but is considered within the broader context of patient-centred care and an entire neuromuscular system. PMID:27583003

  14. A Clock Fingerprints-Based Approach for Wireless Transmitter Identification

    Science.gov (United States)

    Zhao, Caidan; Xie, Liang; Huang, Lianfen; Yao, Yan

    Cognitive radio (CR) was proposed as one of the promising solutions for low spectrum utilization. However, security problems such as the primary user emulation (PUE) attack severely limit its applications. In this paper, we propose a clock fingerprints-based authentication approach to prevent PUE attacks in CR networks with the help of curve fitting and classifier. An experimental setup was constructed using the WLAN cards and software radio devices, and the corresponding results show that satisfied identification can be achieved for wireless transmitters.

  15. A Multiple Model Approach to Modeling Based on LPF Algorithm

    Institute of Scientific and Technical Information of China (English)

    2001-01-01

    Input-output data fitting methods are often used for unknown-structure nonlinear system modeling. Based on model-on-demand tactics, a multiple model approach to modeling for nonlinear systems is presented. The basic idea is to find out, from vast historical system input-output data sets, some data sets matching with the current working point, then to develop a local model using Local Polynomial Fitting (LPF) algorithm. With the change of working points, multiple local models are built, which realize the exact modeling for the global system. By comparing to other methods, the simulation results show good performance for its simple, effective and reliable estimation.``

  16. Breeding soundness evaluation of young beef bulls

    OpenAIRE

    Persson, Ylva

    2007-01-01

    The overall aims were to learn more about factors affecting fertility in Swedish beef sires in general and in yearling beef bulls in particular, focusing mainly on sexual maturity and hind limb health finding useful tools in order to be able to routinely perform a complete bull breeding soundness evaluations in Swedish beef bulls. Semen was collected from yearling beef bulls, postmortem, and the sperm morphology was evaluated. Using a strict definition, based on sperm morphology, we could dem...

  17. Development of an Inquiry-Based Learning Support System Based on an Intelligent Knowledge Exploration Approach

    Science.gov (United States)

    Wu, Ji-Wei; Tseng, Judy C. R.; Hwang, Gwo-Jen

    2015-01-01

    Inquiry-Based Learning (IBL) is an effective approach for promoting active learning. When inquiry-based learning is incorporated into instruction, teachers provide guiding questions for students to actively explore the required knowledge in order to solve the problems. Although the World Wide Web (WWW) is a rich knowledge resource for students to…

  18. Knowledge-based approaches for river basin management

    Directory of Open Access Journals (Sweden)

    P. Mikulecký

    2007-06-01

    Full Text Available Rare attempts to use knowledge technologies and other relevant approaches are found in the river basin management. Some applications of expert systems as well as utilization of soft computing techniques (as neural networks or genetic algorithms are known in an experimental level. Knowledge management approaches still have not been used at all. In this paper we discuss knowledge-based approaches in the river basin management as a difficult yet important direction which could be proven to be helpful. We summarize the research done in the scope of the AQUIN project, one of first Czech knowledge management projects in the river basin management. The project was initiated by the water management company in Pilsen, where dispatchers make decisions about manipulations on the reservoir Nýrsko, the strategic source of drinking water for inhabitants of Pilsen. The project aim was to support dispatchers' decision making under a high degree of uncertainty or data shortage. The research is continued in the scope of a new project AQUINpro, planned for the period of 2006 to 2008.

  19. Systematic approach for synthesis of palm oil-based biorefinery

    Energy Technology Data Exchange (ETDEWEB)

    NG, Rex T. L.; NG, Denny K. S.; LAM, Hon Loong [Dept. of Chemical and Environmental Engineering, Centre of Excellence for Green Technologies, Univ. of Nottingham, Selangor, (Malaysia); TAY, Douglas H. S.; LIM, Joseph H. E. [2GGS Eco Solutions Sdn Bhd, Kuala Lumpur (Malaysia)

    2012-11-01

    Various types of palm oil biomasses are generated from palm oil mill when crude palm oil (CPO) is produced from fresh fruit bunch (FFB). In the current practice, palm oil biomasses are used as the main source of energy input in the palm oil mill to produce steam and electricity. Moreover, those biomasses are regarded as by-products and can be reclaimed easily. Therefore, there is a continuous increasing interest concerning biomasses generated from the palm oil mill as a source of renewable energy. Although various technologies have been exploited to produce bio-fuel (i.e., briquette, pellet, etc.) as well as heat and power generation, however, no systematic approach which can analyse and optimise the synthesise biorefinery is presented. In this work, a systematic approach for synthesis and optimisation of palm oil-based biorefinery which including palm oil mill and refinery with maximum economic performance is developed. The optimised network configuration with achieves the maximum economic performance can also be determined. To illustrate the proposed approach, a case study is solved in this work.

  20. A Redundancy Based Approach for Wireless Sensor Networks Distributed Reconfiguration

    Directory of Open Access Journals (Sweden)

    Bechar Rachid

    2016-05-01

    Full Text Available In this paper, we are interested in the fault-tolerant and lifetime optimisation approaches in wireless sensor networks (WSN. We propose a WSN monitoring approach using distributed reconfiguration which is based on the concept of redundancy. This allows the sensor nodes to be organized in groups where each one will have a quite precise role. It also makes it possible to manage redundancy which will consist in leaving active only some nodes. The other redundant member nodes go into sleep mode and will be awaked using an operation of reconfiguration in case of fault. A node can be also a data source measurement, called simple node or a gateway node that may be used in several groups at the same time, and whose main role is to provide the communication function, each group is managed by a coordinator. The evaluation results of this approach showed that this distributed structure is suitable to ensure simultaneously the fault-tolerance property and to improve the performance and the network lifetime.

  1. The competence-based didactic approach in initial vocational education

    Directory of Open Access Journals (Sweden)

    Skubic-Ermenc Klara

    2014-01-01

    Full Text Available This article examines a didactic and curricular model that was developed to support the implementation of a competence-based approach, today prevailing in the European (initial vocational education and training (VET. It starts by presenting contemporary developments in the Slovenian VET, and then continues with a study of some of the underlying pedagogical concepts influencing the contemporary educational practice. The concept of competence, as it relates to the Slovenian VET, is discussed, and the new didactic model is presented in terms of its conceptualisation, realisation and evaluation. The model is built around the concepts of the competence- based didactic unit, and has been produced to help teachers support students in developing the ability to integrate knowledge, skills and attitudes, so that they are able to solve complex and unpredictable professional tasks and challenges. The article concludes with a discussion on the methodological limitations of the evaluation, and its transferability to other contexts.

  2. Ontology mapping approach based on set & relation theory and OCL

    Institute of Scientific and Technical Information of China (English)

    QIAN Peng-fei; ZHANG Shen-sheng; LIU Ying-hua

    2009-01-01

    An ontology mapping approach based on set & relation theory and OCL is introduced, then an ontolo-gy mapping meta-model is established which is composed of ontology related elements, mapping related elements and definition rule related elements. This ontology mapping meta-model can be regarded as a unified mechanism to realize different kinds of ontology mappings. The powerful computation capability of set and relation theory and the flexible expressive capability of OCL can be used in the computation of ontology mapping meta-model to realize the unified mapping among different ontology models. Based on the mapping meta-model, a general mapping management framework is developed to provide a common mapping storage mechanism, some mapping APIs and mapping rule APIs.

  3. A Security Based Data Mining Approach in Data Grid

    CERN Document Server

    Vidhya, S

    2010-01-01

    Grid computing is the next logical step to distributed computing. Main objective of grid computing is an innovative approach to share resources such as CPU usage; memory sharing and software sharing. Data Grids provide transparent access to semantically related data resources in a heterogeneous system. The system incorporates both data mining and grid computing techniques where Grid application reduces the time for sending results to several clients at the same time and Data mining application on computational grids gives fast and sophisticated results to users. In this work, grid based data mining technique is used to do automatic allocation based on probabilistic mining frequent sequence algorithm. It finds frequent sequences for many users at a time with accurate result. It also includes the trust management architecture for trust enhanced security.

  4. An annotation based approach to support design communication

    CERN Document Server

    Hisarciklilar, Onur

    2007-01-01

    The aim of this paper is to propose an approach based on the concept of annotation for supporting design communication. In this paper, we describe a co-operative design case study where we analyse some annotation practices, mainly focused on design minutes recorded during project reviews. We point out specific requirements concerning annotation needs. Based on these requirements, we propose an annotation model, inspired from the Speech Act Theory (SAT) to support communication in a 3D digital environment. We define two types of annotations in the engineering design context, locutionary and illocutionary annotations. The annotations we describe in this paper are materialised by a set of digital artefacts, which have a semantic dimension allowing express/record elements of technical justifications, traces of contradictory debates, etc. In this paper, we first clarify the semantic annotation concept, and we define general properties of annotations in the engineering design context, and the role of annotations in...

  5. A New Design Approach to Game-Based learning

    DEFF Research Database (Denmark)

    Larsen, Lasse Juel

    2012-01-01

    This paper puts forward a new design perspective for gamebased learning. The general idea is to abandon the long sought-after dream of designing a closed learning system, where students in both primary and secondary school could learn – without the interference of teachers – whatever subject......-based learning system, but will also confront aspects of modern learning theory, especially the notion of reference between the content of an assignment and the reality with which it should or could be connected (situated learning). The second idea promotes a way of tackling the common experience of the average...... to ground the student’s reason to learn. This paper proposes a different approach: using visualisation in immersive 3D worlds as both documentation of learning progress and as a reward system which motivates further learning. The overall design idea is to build a game based learning system from three...

  6. Improving information extraction using a probability-based approach

    DEFF Research Database (Denmark)

    Kim, S.; Ahmed, Saeema; Wallace, K.

    2007-01-01

    . It would be helpful to compile a full list of entities associated with the relevant types before identifying them in texts. However, due to the various ways of referring entities in the texts, manually defined identification rules tend to produce high precision but with low recall. In order to increase...... that these searches often prove unsuccessful. Searches can be improved if domain entities of interest, e.g., 'gas turbine; are explicitly associated with their types, i.e., gas turbine is a type of engine, thus reducing the ambiguity of referring to the entities using various different ways of expressing them...... the recall, while maintaining the high precision, a learning approach that makes identification decisions based on a probability model, rather than simply looking up the presence of the pre-defined variations, looks promising. This paper presents the results of developing such a probability-based entity...

  7. Opportunistic splitting for scheduling using a score-based approach

    KAUST Repository

    Rashid, Faraan

    2012-06-01

    We consider the problem of scheduling a user in a multi-user wireless environment in a distributed manner. The opportunistic splitting algorithm is applied to find the best group of users without reporting the channel state information to the centralized scheduler. The users find the best among themselves while requiring just a ternary feedback from the common receiver at the end of each mini-slot. The original splitting algorithm is modified to handle users with asymmetric channel conditions. We use a score-based approach with the splitting algorithm to introduce time and throughput fairness while exploiting the multi-user diversity of the network. Analytical and simulation results are given to show that the modified score-based splitting algorithm works well as a fair scheduling scheme with good spectral efficiency and reduced feedback. © 2012 IEEE.

  8. Copula-Based Approach to Synthetic Population Generation.

    Science.gov (United States)

    Jeong, Byungduk; Lee, Wonjoon; Kim, Deok-Soo; Shin, Hayong

    2016-01-01

    Generating synthetic baseline populations is a fundamental step of agent-based modeling and simulation, which is growing fast in a wide range of socio-economic areas including transportation planning research. Traditionally, in many commercial and non-commercial microsimulation systems, the iterative proportional fitting (IPF) procedure has been used for creating the joint distribution of individuals when combining a reference joint distribution with target marginal distributions. Although IPF is simple, computationally efficient, and rigorously founded, it is unclear whether IPF well preserves the dependence structure of the reference joint table sufficiently when fitting it to target margins. In this paper, a novel method is proposed based on the copula concept in order to provide an alternative approach to the problem that IPF resolves. The dependency characteristic measures were computed and the results from the proposed method and IPF were compared. In most test cases, the proposed method outperformed IPF in preserving the dependence structure of the reference joint distribution. PMID:27490692

  9. Copula-Based Approach to Synthetic Population Generation

    Science.gov (United States)

    Kim, Deok-Soo

    2016-01-01

    Generating synthetic baseline populations is a fundamental step of agent-based modeling and simulation, which is growing fast in a wide range of socio-economic areas including transportation planning research. Traditionally, in many commercial and non-commercial microsimulation systems, the iterative proportional fitting (IPF) procedure has been used for creating the joint distribution of individuals when combining a reference joint distribution with target marginal distributions. Although IPF is simple, computationally efficient, and rigorously founded, it is unclear whether IPF well preserves the dependence structure of the reference joint table sufficiently when fitting it to target margins. In this paper, a novel method is proposed based on the copula concept in order to provide an alternative approach to the problem that IPF resolves. The dependency characteristic measures were computed and the results from the proposed method and IPF were compared. In most test cases, the proposed method outperformed IPF in preserving the dependence structure of the reference joint distribution. PMID:27490692

  10. Artificial Neural Network Based Approach for short load forecasting

    Directory of Open Access Journals (Sweden)

    Mr. Rajesh Deshmukh

    2011-12-01

    Full Text Available Accurate models for electric power load forecasting are essential to the operation and planning of a power utility company. Load forecasting helps electric utility to make important decisions on trading of power, load switching, and infrastructure development. Load forecasts are extremely important for power utilizes ISOs, financial institutions, and other stakeholder of power sector. Short term load forecasting is a essential part of electric power system planning and operation forecasting made for unit commitment and security assessment, which have a direct impact on operational casts and system security. Conventional ANN based load forecasting method deal with 24 hour ahead load forecasting by using forecasted temp. This can lead to high forecasting errors in case of rapid temperature changes. This paper present a neural network based approach for short term load forecasting considering data for training, validation and testing of neural network.

  11. Fuzzy Axiomatic Design approach based green supplier selection

    DEFF Research Database (Denmark)

    Kannan, Devika; Govindan, Kannan; Rajendran, Sivakumar

    2015-01-01

    proposes a multi-criteria decision-making (MCDM) approach called Fuzzy Axiomatic Design (FAD) to select the best green supplier for Singapore-based plastic manufacturing company. At first, the environmental criteria was developed along with the traditional criteria based on the literature review...... and company requirements. Next, the FAD methodology evaluates the requirements of both the manufacturer (design needs) and the supplier (functional needs), and because multiple criteria must be considered, a multi-objective optimization model of a fuzzy nature must be developed. The application...... responsible in addition to being efficiently managed. A significant way to implement responsible GSCM is to reconsider, in innovative ways, the purchase and supply cycle, and a preliminary step would be to ensure that the supplier of goods successfully incorporates green criteria. Therefore, this paper...

  12. A model-based approach to human identification using ECG

    Science.gov (United States)

    Homer, Mark; Irvine, John M.; Wendelken, Suzanne

    2009-05-01

    Biometrics, such as fingerprint, iris scan, and face recognition, offer methods for identifying individuals based on a unique physiological measurement. Recent studies indicate that a person's electrocardiogram (ECG) may also provide a unique biometric signature. Current techniques for identification using ECG rely on empirical methods for extracting features from the ECG signal. This paper presents an alternative approach based on a time-domain model of the ECG trace. Because Auto-Regressive Integrated Moving Average (ARIMA) models form a rich class of descriptors for representing the structure of periodic time series data, they are well-suited to characterizing the ECG signal. We present a method for modeling the ECG, extracting features from the model representation, and identifying individuals using these features.

  13. A model-data based systems approach to process intensification

    DEFF Research Database (Denmark)

    Gani, Rafiqul

    In recent years process intensification (PI) has attracted much interest as a potential means of process improvement to meet the demands, such as, for sustainable production. A variety of intensified equipment are being developed that potentially creates options to meet these demands...... are preserved for focused validation of only the promising candidates in the second-stage. This approach, however, would be limited to intensification based on “known” unit operations, unless the PI process synthesis/design is considered at a lower level of aggregation, namely the phenomena level. That is......-based synthesis/design method for process intensification will be presented together with illustrations of its application through case studies. Aspects such as need for models, computer-aided framework, the work-flow and data-flow for the PI synthesis method will also be highlighted....

  14. A Model-Based Approach to Constructing Music Similarity Functions

    Science.gov (United States)

    West, Kris; Lamere, Paul

    2006-12-01

    Several authors have presented systems that estimate the audio similarity of two pieces of music through the calculation of a distance metric, such as the Euclidean distance, between spectral features calculated from the audio, related to the timbre or pitch of the signal. These features can be augmented with other, temporally or rhythmically based features such as zero-crossing rates, beat histograms, or fluctuation patterns to form a more well-rounded music similarity function. It is our contention that perceptual or cultural labels, such as the genre, style, or emotion of the music, are also very important features in the perception of music. These labels help to define complex regions of similarity within the available feature spaces. We demonstrate a machine-learning-based approach to the construction of a similarity metric, which uses this contextual information to project the calculated features into an intermediate space where a music similarity function that incorporates some of the cultural information may be calculated.

  15. A NOVEL RULE-BASED FINGERPRINT CLASSIFICATION APPROACH

    Directory of Open Access Journals (Sweden)

    Faezeh Mirzaei

    2014-03-01

    Full Text Available Fingerprint classification is an important phase in increasing the speed of a fingerprint verification system and narrow down the search of fingerprint database. Fingerprint verification is still a challenging problem due to the difficulty of poor quality images and the need for faster response. The classification gets even harder when just one core has been detected in the input image. This paper has proposed a new classification approach which includes the images with one core. The algorithm extracts singular points (core and deltas from the input image and performs classification based on the number, locations and surrounded area of the detected singular points. The classifier is rule-based, where the rules are generated independent of a given data set. Moreover, shortcomings of a related paper has been reported in detail. The experimental results and comparisons on FVC2002 database have shown the effectiveness and efficiency of the proposed method.

  16. A TQCS-based Scheduling Approach for Manufacturing Grid

    Institute of Scientific and Technical Information of China (English)

    LIU Li-lan; YU Tao; CAO Hong-wu; SHI Zhan-bei

    2004-01-01

    With Open Grid Service Architecture (OGSA) as system framework, and Globus Toolkit3.0 (GT3) as developing tools, Manufacturing Grid (MG) is proposed in this research to realize resource sharing and collaborative working among manufacturing resources, and task scheduling is one of the most critical components in this system. Nevertheless, the Globus Resource Allocation Manager (GRAM) does not provide scheduling system by default, and traditional performance-guided or economy-guided schedulers cannot satisfy our needs in MG. So, in this paper, a TQCS (Time, Quality, Cost, Service)-based scheduling approach is presented and the corresponding scheduler (Manufacturing Grid Task Scheduler, MGTS) is implemented with the functions of Global Process Planning (GPP) analyzing, resource discovery, resource selection, AHP (Analytic Hierarchy Process)-based resource mapping, and fault-tolerant handling. Furthermore, the application architecture is depicted at the end of the paper to illustrate the utilization of our scheduler.

  17. Space nuclear reactor system diagnosis: Knowledge-based approach

    International Nuclear Information System (INIS)

    SP-100 space nuclear reactor system development is a joint effort by the Department of Energy, the Department of Defense and the National Aeronautics and Space Administration. The system is designed to operate in isolation for many years, and is possibly subject to little or no remote maintenance. This dissertation proposes a knowledge based diagnostic system which, in principle, can diagnose the faults which can either cause reactor shutdown or lead to another serious problem. This framework in general can be applied to the fully specified system if detailed design information becomes available. The set of faults considered herein is identified based on heuristic knowledge about the system operation. The suitable approach to diagnostic problem solving is proposed after investigating the most prevalent methodologies in Artificial Intelligence as well as the causal analysis of the system. Deep causal knowledge modeling based on digraph, fault-tree or logic flowgraph methodology would present a need for some knowledge representation to handle the time dependent system behavior. A proposed qualitative temporal knowledge modeling methodology, using rules with specified time delay among the process variables, has been proposed and is used to develop the diagnostic sufficient rule set. The rule set has been modified by using a time zone approach to have a robust system design. The sufficient rule set is transformed to a sufficient and necessary one by searching the whole knowledge base. Qualitative data analysis is proposed in analyzing the measured data if in a real time situation. An expert system shell - Intelligence Compiler is used to develop the prototype system. Frames are used for the process variables. Forward chaining rules are used in monitoring and backward chaining rules are used in diagnosis

  18. Agent-Based Approaches for Behavioural Modelling in Military Simulations

    Directory of Open Access Journals (Sweden)

    Gaurav Chaudhary

    2015-12-01

    Full Text Available Behavioral modeling of combat entities in military simulations by creating synthetic agents in order to satisfy various battle scenarios is an important problem. The conventional modeling tools are not always sufficient to handle complex situations requiring adaptation. To deal with this Agent-Based Modeling (ABM is employed, as the agents exhibit autonomous behavior by adapting and varying their behavior during the course of the simulation whilst achieving the goals. Synthetic agents created by means of Computer Generated Force (CGF is a relatively recent approach to model behavior of combat entities for a more realistic training and effective military planning. CGFs, are also sometimes referred to as Semi- Automated Forces (SAF and enables to create high-fidelity simulations. Agents are used to control and augment the behavior of CGF entities, hence converting them into Intelligent CGF (ICGF. The intelligent agents can be modeled to exhibit cognitive abilities. For this review paper, extensive papers on stateof-the-art in agent-based modeling approaches and applications were surveyed. The paper assimilates issues involved in ABM with CGF as an important component of it. It reviews modeling aspects with respect to the interrelationship between ABM and CGF, which is required to carry out behavioral modeling. Important CGFs have been examined and a list with their significant features is given. Another issue that has been reviewed is that how the synthetic agents having different capabilities are implemented at different battle levels. Brief mention of state-of-the-art integrated cognitive architectures and a list of significant cognitive applications based on them with their features is given. At the same time, the maturity of ABM in agent-based applications has also been considered.

  19. Knowledge – Based Reservoir Simulation – A Novel Approach

    Directory of Open Access Journals (Sweden)

    M. Enamul Hossain

    2010-01-01

    Full Text Available It is well known that reservoir simulation studies are very subjective and vary fromsimulator to simulator. While SPE benchmarking has helped accept differences inpredicting petroleum reservoir performance, there has been no scientific explanationbehind the variability that has frustrated many policy makers and operations managers andpuzzled scientists and engineers. In a recent book by the research group of R. Islam, anew approach is taken to add the Knowledge dimension to the problem. For the first time,reservoir simulation equations are shown to have embedded variability and multiplesolutions that are in line with physics rather than spurious mathematical solutions. Withthis clear description, a fresh perspective in reservoir simulation is presented. Unlike themajority of reservoir simulation approaches available today, the 'knowledge-based'approach does not stop at questioning the fundamentals of reservoir simulation but offerssolutions and demonstrates that proper reservoir simulation should be transparent andempower decision makers rather than creating a black box. Mathematical developments ofnew governing equations based on in-depth understanding of the factors that influencefluid flow in porous media under different flow conditions are introduced. Behavior of flowthrough matrix and fractured systems in the same reservoir, heterogeneity and fluid/rockproperties interactions, Darcy and non-Darcy flow are among the issues that are thoroughlyaddressed. For the first time, the fluid memory factor is introduced with a functionalform. The resulting governing equations are solved without linearization at any stage. Aseries of clearly superior mathematical and numerical techniques are also presented thatallow one to achieve this objective. Mathematical solutions that provide a basis forsystematic tracking of multiple solutions that are inherent to non-linear governingequations. This was possible because the new technique is capable of solving non

  20. Mutation breeding newsletter. No. 12

    International Nuclear Information System (INIS)

    This issue of the Newsletter presents new reports on mutation breeding programs using radiation or chemical mutagenesis to improve productivity, introduce disease resistance or induce morphological changes in crop plants