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Sample records for brazil genotype distribution

  1. Geographic distribution of hepatitis C virus genotypes in Brazil

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    Campiotto S.

    2005-01-01

    Full Text Available Brazil is a country of continental dimension with a population of different ethnic backgrounds. Thus, a wide variation in the frequencies of hepatitis C virus (HCV genotypes is expected to occur. To address this point, 1,688 sequential samples from chronic HCV patients were analyzed. HCV-RNA was amplified by the RT-PCR from blood samples collected from 1995 to 2000 at different laboratories located in different cities from all Brazilian States. Samples were collected in tubes containing a gel separator, centrifuged in the site of collection and sent by express mail in a refrigerated container to Laboratório Bioquímico Jardim Paulista, São Paulo, SP, Brazil. HCV- RNA was extracted from serum and submitted to RT and nested PCR using standard procedures. Nested PCR products were submitted to cycle sequencing reactions without prior purification. Sequences were analyzed for genotype determination and the following frequencies were found: 64.9% (1,095 for genotype 1, 4.6% (78 for genotype 2, 30.2% (510 for genotype 3, 0.2% (3 for genotype 4, and 0.1% (2 for genotype 5. The frequencies of HCV genotypes were statistically different among Brazilian regions (P = 0.00017. In all regions, genotype 1 was the most frequent (51.7 to 74.1%, reaching the highest value in the North; genotype 2 was more prevalent in the Center-West region (11.4%, especially in Mato Grosso State (25.8%, while genotype 3 was more common in the South (43.2%. Genotypes 4 and 5 were rarely found and only in the Southeast, in São Paulo State. The present data indicate the need for careful epidemiological surveys throughout Brazil since knowing the frequency and distribution of the genotypes would provide key information for understanding the spread of HCV.

  2. Human papillomavirus genotypes distribution in 175 invasive cervical cancer cases from Brazil

    International Nuclear Information System (INIS)

    Invasive cervical cancer is the second most common malignant tumor affecting Brazilian women. Knowledge on Human Papillomavirus (HPV) genotypes in invasive cervical cancer cases is crucial to guide the introduction and further evaluate the impact of new preventive strategies based on HPV. We aimed to provide updated comprehensive data about the HPV types’ distribution in patients with invasive cervical cancer. Fresh tumor tissue samples of histologically confirmed invasive cervical cancer were collected from 175 women attending two cancer reference hospitals from São Paulo State: ICESP and Hospital de Câncer de Barretos. HPV detection and genotyping were performed by the Linear Array HPV Genotyping Test (Roche Molecular Diagnostics, Pleasanton,USA). 170 out of 172 valid samples (99%) were HPV DNA positive. The most frequent types were HPV16 (77.6%), HPV18 (12.3%), HPV31 (8.8%), HPV33 (7.1%) and HPV35 (5.9%). Most infections (75%) were caused by individual HPV types. Women with adenocarcinoma were not younger than those with squamous cell carcinoma, as well, as women infected with HPV33 were older than those infected by other HPV types. Some differences between results obtained in the two hospitals were observed: higher overall prevalence of HPV16, absence of single infection by HPV31 and HPV45 was verified in HC-Barretos in comparison to ICESP patients. To our knowledge, this is one of the largest studies made with fresh tumor tissues of invasive cervical cancer cases in Brazil. This study depicted a distinct HPV genotype distribution between two centers that may reflect the local epidemiology of HPV transmission among these populations. Due to the impact of these findings on cervical cancer preventive strategies, extension of this investigation to routine screening populations is warranted

  3. Hepatitis B virus genotypes circulating in Brazil: molecular characterization of genotype F isolates

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    Virgolino Helaine A

    2007-11-01

    Full Text Available Abstract Background Hepatitis B virus (HBV isolates have been classified in eight genotypes, A to H, which exhibit distinct geographical distributions. Genotypes A, D and F are predominant in Brazil, a country formed by a miscegenated population, where the proportion of individuals from Caucasian, Amerindian and African origins varies by region. Genotype F, which is the most divergent, is considered indigenous to the Americas. A systematic molecular characterization of HBV isolates from different parts of the world would be invaluable in establishing HBV evolutionary origins and dispersion patterns. A large-scale study is needed to map the region-by-region distribution of the HBV genotypes in Brazil. Results Genotyping by PCR-RFLP of 303 HBV isolates from HBsAg-positive blood donors showed that at least two of the three genotypes, A, D, and F, co-circulate in each of the five geographic regions of Brazil. No other genotypes were identified. Overall, genotype A was most prevalent (48.5%, and most of these isolates were classified as subgenotype A1 (138/153; 90.2%. Genotype D was the most common genotype in the South (84.2% and Central (47.6% regions. The prevalence of genotype F was low (13% countrywide. Nucleotide sequencing of the S gene and a phylogenetic analysis of 32 HBV genotype F isolates showed that a great majority (28/32; 87.5% belonged to subgenotype F2, cluster II. The deduced serotype of 31 of 32 F isolates was adw4. The remaining isolate showed a leucine-to-isoleucine substitution at position 127. Conclusion The presence of genotypes A, D and F, and the absence of other genotypes in a large cohort of HBV infected individuals may reflect the ethnic origins of the Brazilian population. The high prevalence of isolates from subgenotype A1 (of African origin indicates that the African influx during the colonial slavery period had a major impact on the circulation of HBV genotype A currently found in Brazil. Although most genotype F

  4. Biotyping and Genotyping (MLVA16) of Brucella abortus Isolated from Cattle in Brazil, 1977 to 2008

    OpenAIRE

    Minharro, Sílvia; Silva Mol, Juliana P.; Elaine M. S. Dorneles; Pauletti, Rebeca B; Neubauer, Heinrich; Melzer, Falk; Poester, Fernando P.; Dasso, Maurício G.; Pinheiro, Elaine S.; Soares Filho, Paulo M.; Santos, Renato L.; Marcos B. Heinemann; Andrey P. Lage

    2013-01-01

    Brucellosis is a worldwide distributed zoonosis that causes important economic losses to animal production. In Brazil, information on the distribution of biovars and genotypes of Brucella spp. is scarce or unavailable. This study aimed (i) to biotype and genotype 137 Brazilian cattle isolates (from 1977 to 2008) of B. abortus and (ii) to analyze their distribution. B. abortus biovars 1, 2 and 3 (subgroup 3b) were confirmed and biovars 4 and 6 were first described in Brazil. Genotyping by the ...

  5. Candida species distribution, genotyping and virulence factors of Candida albicans isolated from the oral cavity of kidney transplant recipients of two geographic regions of Brazil

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    da Silva-Rocha, Walicyranison Plinio; Lemos, Vitor Luiz de Brito; Svidizisnki, Terezinha Inês Estivalet; Milan, Eveline Pipolo; Chaves, Guilherme Maranhão

    2014-01-01

    Background Candida albicans is a diploid yeast that in some circumstances may cause oral or oropharyngeal infections. This investigation aimed to study the prevalence of Candida spp. and to analyze the ABC genotypes of 76 clinical isolates of C. albicans obtained from the oral cavity of kidney transplant patients from two distinct geographic regions of Brazil. Methods We typed 48 strains with ABC genotyping and Microsatelitte using primer M13 and tested three virulence factors in vitro: phosp...

  6. Biotyping and genotyping (MLVA16) of Brucella abortus isolated from cattle in Brazil, 1977 to 2008.

    Science.gov (United States)

    Minharro, Sílvia; Silva Mol, Juliana P; Dorneles, Elaine M S; Pauletti, Rebeca B; Neubauer, Heinrich; Melzer, Falk; Poester, Fernando P; Dasso, Maurício G; Pinheiro, Elaine S; Soares Filho, Paulo M; Santos, Renato L; Heinemann, Marcos B; Lage, Andrey P

    2013-01-01

    Brucellosis is a worldwide distributed zoonosis that causes important economic losses to animal production. In Brazil, information on the distribution of biovars and genotypes of Brucella spp. is scarce or unavailable. This study aimed (i) to biotype and genotype 137 Brazilian cattle isolates (from 1977 to 2008) of B. abortus and (ii) to analyze their distribution. B. abortus biovars 1, 2 and 3 (subgroup 3b) were confirmed and biovars 4 and 6 were first described in Brazil. Genotyping by the panel 1 revealed two groups, one clustering around genotype 40 and another around genotype 28. Panels 2A and 2B disclosed a high diversity among Brazilian B. abortus strains. Eighty-nine genotypes were found by MLVA16. MLVA16 panel 1 and 2 showed geographic clustering of some genotypes. Biotyping and MLVA16 genotyping of Brazilian B. abortus isolates were useful to better understand the epidemiology of bovine brucellosis in the region. PMID:24324670

  7. Biotyping and genotyping (MLVA16 of Brucella abortus isolated from cattle in Brazil, 1977 to 2008.

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    Sílvia Minharro

    Full Text Available Brucellosis is a worldwide distributed zoonosis that causes important economic losses to animal production. In Brazil, information on the distribution of biovars and genotypes of Brucella spp. is scarce or unavailable. This study aimed (i to biotype and genotype 137 Brazilian cattle isolates (from 1977 to 2008 of B. abortus and (ii to analyze their distribution. B. abortus biovars 1, 2 and 3 (subgroup 3b were confirmed and biovars 4 and 6 were first described in Brazil. Genotyping by the panel 1 revealed two groups, one clustering around genotype 40 and another around genotype 28. Panels 2A and 2B disclosed a high diversity among Brazilian B. abortus strains. Eighty-nine genotypes were found by MLVA16. MLVA16 panel 1 and 2 showed geographic clustering of some genotypes. Biotyping and MLVA16 genotyping of Brazilian B. abortus isolates were useful to better understand the epidemiology of bovine brucellosis in the region.

  8. Prevalence, incidence density, and genotype distribution of GB virus C infection in a cohort of recently HIV-1-infected subjects in Sao Paulo, Brazil.

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    Maria Teresa M Giret

    Full Text Available BACKGROUND: The results of previous studies elsewhere have indicated that GB virus C (GBV-C infection is frequent in patients infected with the human immunodeficiency virus type 1 (HIV-1 due to similar transmission routes of both viruses. The aim of this study was to determine the prevalence, incidence density and genotypic characteristics of GBV-C in this population. METHODOLOGY/PRINCIPAL FINDINGS: The study population included 233 patients from a cohort primarily comprised of homosexual men recently infected with HIV-1 in São Paulo, Brazil. The presence of GBV-C RNA was determined in plasma samples by reverse transcriptase-nested polymerase chain reaction and quantified by real-time PCR. GBV-C genotypes were determined by direct sequencing. HIV viral load, CD4+ T lymphocyte and CD8+ T lymphocyte count were also tested in all patients. The overall prevalence of GBV-C infection was 0.23 (95% CI: 0.18 to 0.29 in the study group. There was no significant difference between patients with and without GBV-C infection and Glycoprotein E2 antibody presence regarding age, sex, HIV-1 viral load, CD4+ and CD8+T cell counts and treatment with antiretroviral drugs. An inverse correlation was observed between GBV-C and HIV-1 loads at enrollment and after one year. Also, a positive but not significant correlation was observed between GBV-C load and CD4+ T lymphocyte. Phylogenetic analysis of the GBV-C isolates revealed the presence of genotype 1 and genotype 2, these sub classified into subtype 2a and 2b. CONCLUSION/SIGNIFICANCE: GBV-C infection is common in recently HIV -1 infected patients in Sao Paulo, Brazil and the predominant genotype is 2b. This study provides the first report of the GBV-C prevalence at the time of diagnosis of HIV-1 and the incidence density of GBV-C infection in one year.

  9. Estimation of Genotype Distributions and Posterior Genotype Probabilities for β-Mannosidosis in Salers Cattle

    OpenAIRE

    Taylor, J F; Abbitt, B.; Walter, J P; Davis, S. K.; Jaques, J. T.; Ochoa, R. F.

    1993-01-01

    β-Mannosidosis is a lethal lysosomal storage disease inherited as an autosomal recessive in man, cattle and goats. Laboratory assay data of plasma β-mannosidase activity represent a mixture of homozygous normal and carrier genotype distributions in a proportion determined by genotype frequency. A maximum likelihood approach employing data transformations for each genotype distribution and assuming a diallelic model of inheritance is described. Estimates of the transformation and genotype dist...

  10. Distribution of dental schools in Brazil, 2015

    OpenAIRE

    Emilio Prado da Fonseca; Carla Martins Rocha; Estie Kruger; Marc Tennant; Fabio Luiz Mialhe; Marcelo de Castro Meneghim

    2016-01-01

    Introduction: The geographical distribution of dentistry schools has been the object of study in Brazil and in other parts of the world. Aim: To analyze the distribution of dentistry schools in Brazil by states and to correlate with the number of dentists in 2015. Methods: This is a cross-sectional study. The analysis of the courses distribution was carried out by states and categorized by public or private schools. All the institutions′ addresses were geocoded and mapped to illustrate the sp...

  11. Light, distribution company in Brazil

    International Nuclear Information System (INIS)

    Since the publication of the Roulet Report, Electricite de France (EDF), the French group is crossing tormented hours. Despite its good financial results in 2004 with a turnover of 46.9 Mds euros its debts are around 19.7 Mds euros and are mainly due to its international investments which were not all very profitable. The first source of concern remains the Latin America markets and more particularly the Brazilian one which recorded 1.6 Md euros of losses. The future of EDF investment in Brazil, through its acquisition of the distribution company, Light, is uncertain. Within a new electric power industry framework, after currency devaluation and a rationing, Light is now in a catastrophic financial situation. The last tariff revisions given by the Brazilian authorities and the economic characteristics of the concession put the distributor at the edge of the bankruptcy. This article presents the situation of EDF group and Light at the end of 2004. The main question is the future of the Brazilian distributor in general and more particularly within the French group EDF. (author)

  12. Dengue Virus 3 Genotype 1 Associated with Dengue Fever and Dengue Hemorrhagic Fever, Brazil

    OpenAIRE

    Figueiredo, Leandra Barcelos; Cecílio, Alzira Batista; Ferreira, Gustavo Portela; Drumond, Betânia Paiva; Germano de Oliveira, Jaquelline; Bonjardim, Cláudio Antônio; Ferreira, Paulo César Peregrino; Kroon, Erna Geessien

    2008-01-01

    Dengue serotype 3 viruses were isolated from patients in Brazil from 2002 through 2004. On the basis of phylogenetic analyses, these isolates were assigned genotype 1. This genotype had never been reported in South America before. Its appearance indicates a major risk factor for dengue epidemics and severe disease.

  13. Dengue virus 3 genotype I in Aedes aegypti mosquitoes and eggs, Brazil, 2005-2006.

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    Vilela, Ana P P; Figueiredo, Leandra B; dos Santos, João R; Eiras, Alvaro E; Bonjardim, Cláudio A; Ferreira, Paulo C P; Kroon, Erna G

    2010-06-01

    Dengue virus type 3 genotype I was detected in Brazil during epidemics in 2002-2004. To confirm this finding, we identified this virus genotype in naturally infected field-caught Aedes aegypti mosquitoes and eggs. Results showed usefulness of virus investigations in vectors as a component of active epidemiologic surveillance. PMID:20507754

  14. Atypical Toxoplasma gondii genotype in feral cats from the Fernando de Noronha Island, northeastern Brazil.

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    Melo, R P B; Almeida, J C; Lima, D C V; Pedrosa, C M; Magalhães, F J R; Alcântara, A M; Barros, L D; Vieira, R F C; Garcia, J L; Mota, R A

    2016-07-15

    Toxoplasma gondii isolates from Brazil have a different phenotypic and genotypic pattern, with predominance of virulent isolates and recombinant genotypes, compared to the North Hemisphere. Considering that a new T. gondii genotype, non-pathogenic to mice, was previously identified from free-range chickens from the Fernando de Noronha Island, Brazil, this study aimed to identify genotypes of this parasite in tissue samples of feral cats (Felis catus) from this Brazilian Island. Anti-T. gondii IgG antibodies were detected in 18/31 (58%) feral cats. Two non-virulent T. gondii isolates were obtained by mouse bioassay. Genotyping was performed by PCR-RFLP using 10 genetic markers (SAG1, SAG2, SAG3, BTUB, GRA6, c22-8, c29-2, PK1, L358 and Apico) and an atypical strain of T. gondii (ToxoDB #146) was identified. This is the first report of this genotype in feral cats. PMID:27270396

  15. An autochthonous case of hepatitis C virus genotype 5a in Brazil: phylogenetic analysis

    DEFF Research Database (Denmark)

    Ribeiro, L.C.; Souto, F.J.D.; do Espirito-Santo, M.P.;

    2009-01-01

    transfusions several years before. One of her blood donors was identified and tested negative for anti-HCV and HCV RNA, as were her husband and offspring. Phylogenetic analysis of the E1 and NS5B regions confirmed that this HCV strain belonged to genotype 5a. However, the E1 region analysis indicates that our......Genotype 5 of hepatitis C virus (HCV) has been rarely identified in South America. A female of African descent who never left Brazil was found to be infected by this genotype in Mato Grosso state, Central Brazil. The patient denied drug injections and revealed that she had received blood...

  16. Prevalence of hepatitis C virus (HCV infection and HCV genotypes of hemodialysis patients in Salvador, Northeastern Brazil

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    Silva L.K.

    2006-01-01

    Full Text Available Hepatitis C virus (HCV infection has been identified as the major cause of chronic liver disease among patients on chronic hemodialysis (HD, despite the important reduction in risks obtained by testing candidate blood donors for anti-HCV antibodies and the use of recombinant erythropoietin to treat anemia. A cross-sectional study was performed to estimate the prevalence of HCV infection and genotypes among HD patients in Salvador, Northeastern Brazil. Anti-HCV seroprevalence was determined by ELISA in 1243 HD patients from all ten different dialysis centers of the city. HCV infection was confirmed by RT-PCR and genotyping was performed by restriction fragment length polymorphism. Anti-HCV seroprevalence among HD patients was 10.5% (95% CI: 8.8-12.3 (Murex anti-HCV, Abbott Murex, Chicago, IL, USA. Blood samples for qualitative HCV detection and genotyping were collected from 125/130 seropositive HD patients (96.2%. HCV-RNA was detected in 92/125 (73.6% of the anti-HCV-positive patients. HCV genotype 1 (77.9% was the most prevalent, followed by genotype 3 (10.5% and genotype 2 (4.6%. Mixed infections of genotypes 1 and 3 were found in 7.0% of the total number of patients. The present results indicate a significant decrease in anti-HCV prevalence from 23.8% detected in a study carried out in 1994 to 10.5% in the present study. The HCV genotype distribution was closely similar to that observed in other hemodialysis populations in Brazil, in local candidate blood donors and in other groups at risk of transfusion-transmitted infection.

  17. Global distribution of novel rhinovirus genotype

    DEFF Research Database (Denmark)

    Briese, Thomas; Renwick, Neil; Venter, Marietjie;

    2008-01-01

    Global surveillance for a novel rhinovirus genotype indicated its association with community outbreaks and pediatric respiratory disease in Africa, Asia, Australia, Europe, and North America. Molecular dating indicates that these viruses have been circulating for at least 250 years....

  18. Risk Factors for Infection with Different Hepatitis C Virus Genotypes in Southern Brazil

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    Marisa Lúcia Romani Paraboni

    2012-01-01

    Full Text Available Objectives. To investigate the proportion of different genotypes in countryside microregions in southern Brazil, and their association with risk factors. Methods. Cross-sectional study including a convenience sample of patients who tested positive for HCV-RNA and were referred to a regional health center for genotyping, from December 2003 to January 2008. Data were obtained through the National Disease Surveillance Data System, from laboratory registers and from patient charts. Identification of genotypes was carried out using the Restriction Fragment Length Polymorphism “in house” technique. Independent associations with genotypes were evaluated in multinomial logistic regression and prevalence rates of genotypes were estimated with modified Poisson regression. Results. The sample consisted of 441 individuals, 41.1±12.0 years old, 56.5% men. Genotype 1 was observed in 41.5% (95% CI 37.9–48.1 of patients, genotype 2 in 19.3% (95% CI 15.0–23.6, and genotype 3 in 39.2% (95% CI 35.6–43.0. HCV genotype was significantly associated with gender and age. Dental procedures were associated with higher proportion of genotype 2 independently of age, education, and patient treatment center. Conclusions. The hepatitis C virus genotype 1 was the most frequent. Genotype 2 was associated with female gender, age, and dental procedure exposition.

  19. Carotenoid analysis of Cassava genotypes roots (Manihot Esculenta Crantz) cultivated in Southern Brazil using chemometric tools

    OpenAIRE

    Moresco, Rodolfo; Uarrota, Virgílio Gavicho; Pereira, Aline; Tomazzoli, M. M.; Nunes, Eduardo da Costa; Peruch, Luiz Augusto Martins; Costa, Christopher; Rocha, Miguel; Maraschin, Marcelo

    2015-01-01

    Manihot esculenta roots rich in -carotene are an important staple food for populations with risk of vitamin A deficiency. Cassava genotypes with high pro-vitamin A activity have been identified as a strategy to reduce the prevalence of deficiency of this vitamin, In this study, the metabolomics characterization focusing on the carotenoid composition of ten cassava genotypes cultivated in southern Brazil by UV-visible scanning spectrophotometry and reverse phase-high performance liquid chromat...

  20. Toxoplasma gondii in free-ranging wild small felids from Brazil: molecular detection and genotypic characterization.

    Science.gov (United States)

    Cañón-Franco, W A; Araújo, F A P; López-Orozco, N; Jardim, M M A; Keid, L B; Dalla-Rosa, C; Cabral, A D; Pena, H F J; Gennari, S M

    2013-11-01

    Brazil harbors the largest number of wild Neotropical felid species, with ten of the twelve species recorded in the American continent. Although these animals are considered to be definitive hosts for Toxoplasma gondii, there are few descriptions of the parasite in these species. Here, we performed a molecular detection of T. gondii by amplification of the marker ITS-1 from tissue samples obtained from 90 free-ranging wild small Neotropical felids from Rio Grande do Sul - Brazil. Of the sampled animals, 34.4% (n=31) were positive including the species Puma yagouaroundi - jaguarondi (9/22), Leopardus geoffroyi - Geoffroy's cat (6/22), Leopardus tigrinus - oncilla (8/28), Leopardus wiedii - margay (6/10), Leopardus pardalis - ocelot (1/1) and Leopardus colocolo - Pampas cat (1/7). Toxoplasma DNA was detected with a frequency of 14.6% (63/433) in primary samples of tongue (16/56), brain (8/43), skeletal muscle (15/83), heart (7/63), diaphragm (3/56), vitreous humor (2/44), eye muscle (6/44) and eyeball (6/44). Multilocus PCR-RFLP genotyping of eleven small Neotropical felids using the molecular markers SAG1, 5'3'SAG2, alt. SAG2, SAG3, BTUB, GRA6, c22-8, c29-2, L358, PK1, Apico and CS3 allowed the partial characterization of eight genotypes. We fully characterized two new genotypes that have not been described previously in Brazil (Lw#31Tn from L. wiedii and Py#21Sm from P. yagouaroundi) and one genotype Py#56Br from P. yagouaroundi that has been described previously in isolates from cats, dogs and capybaras from São Paulo state. This study constitutes the first detection and genotypic characterization of T. gondii in free-ranging felids in Brazil, demonstrating the occurrence of the parasite in wild populations and suggesting its potential transmissibility to humans and other domestic and wild animals. PMID:23932730

  1. Distribution of Human papilloma virus genotypes in cervical cancer tissues

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    Stamenković M.

    2014-01-01

    Full Text Available Cervical cancer incidence and mortality rates in Serbia are among the highest in Europe and data on Human papilloma virus (HPV type distribution are scarce. The aim of this study was to determine the prevalence of HPV types in archival specimens of cervical cancer tissues of women in the Serbian population. A total of 45 paraffin-embedded tissue samples of cervical carcinoma were used in this study. The procedure included deparaffinization of tissue samples, DNA extraction, PCR, gel electrophoresis and HPV genotyping by direct sequencing. HPV was detected in 32 samples (71%. Genotyping revealed the presence of 6 high-risk HPV types 16, 18, 33, 45, 53 and 58, where HPV type 16 was the most prevalent type (73.7%. The results of this study and further studies will provide more detailed information about HPV genotype distribution and may contribute to the formulation of national guidelines for the prevention of cervical cancer. [175073

  2. Hepatitis B Virus Genotype D Isolates Circulating in Chapeco, Southern Brazil, Originate from Italy.

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    Carolina Souza Gusatti

    Full Text Available Hepatitis B virus genotype A1 (HBV/A1, of African origin, is the most prevalent genotype in Brazil, while HBV/F predominates in the other South American countries. However, HBV/D is the most common in the three states of southern Brazil, where 'islands' of elevated prevalence, as Chapecó and other cities, have been described. In this study, 202 HBV chronic carriers attending in 2013 the viral hepatitis ambulatory of Chapecó, were investigated. In comparison with previous studies performed in the same ambulatory, a rapid aging of the HBV infected population was observed (mean age of the newly diagnosed patients increasing from 29.9 ± 10.3 years in 1996 to 44.4 ± 13.3 years in 2013, probably due to a singular vaccination schedule at Chapecó that included not only children but also adolescents. Phylogenetic and BLAST analyses (S region classified 91 HBV isolates into genotypes A (n = 3 and D (n = 88. The majority of HBV/D isolates were closely related to D3 sequences. To understand the reasons for the absence or near absence of genotypes A and F, and how HBV/D was introduced in the south of Brazil, HBV/D infected patients were inquired about their genealogical and geographical origins. Forty-three (52% patients have their four grandparents of Italian origin, vs. seven (8% who have their four grandparents of Brazilian origin. At all, 65 out of 83 (78% patients had at least one grandparent originating from Italy. Taking into consideration the fact that Italy is one of the few countries where subgenotype D3 is predominant, the results strongly suggested that HBV/D was introduced in Brazil through Italian immigration which culminated between 1870 and 1920.

  3. Distribution of Gossypol Glands on Cotton (Gossypium hirsutum L. Genotypes

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    Yuksel BOLEK

    2010-06-01

    Full Text Available Knowing the distribution of gossypol glands in cotton will help to improve advanced cultivars with great economic return. The aim is to compare cotton genotypes for the number and the distribution of gossypol glands found in different plant parts and to determine the genotypes which contain more gossypol glands in their vegetative parts but little or none in their seeds. The intensity and the greatness of the gossypol amount is an important part of defending against plant insects and diseases. Randomized complete block design with two replications was applied at the Agricultural Research Institute of Kahramanmara? during 2006-2007. Thirty seven cotton genotypes belonging to Gossypium hirsutum L. species were the plant material. The number of gossypol glands on stem, boll walls (carpels, leaves and seeds were visually counted and ranged from 0 to 142 per cm2 for stem, 0 to 135 per cm2 for leaf, 0 to 85 per cm2 for boll wall and 0 to 16 per mm2 for embryo (kernel. Number of gossypol glands varied for the genotypes and years but this variance was too low in some genotypes. Genotypes �Acala Royale�, �Acala Prema�, �Deltaopal� and �Carmen� had relatively more gossypol glands on their vegetative parts but less in their seed. Measured parameters were positively and significantly correlated to each other. Correlations for number of gossypol glands between stem and leaf (r=0.77**, boll wall (r=0.65** and seed (r=0.32** were significant.

  4. Legionella prevention in the Netherlands: an evaluation using genotype distribution.

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    Euser, S M; Bruin, J P; Brandsema, P; Reijnen, L; Boers, S A; Den Boer, J W

    2013-08-01

    Legionnaires' disease (LD) is an acute pneumonia caused by the inhalation or aspiration of aerosols contaminated with Legionella bacteria. The watery environment is considered to be the natural habitat for these bacteria. Therefore, drinking water legislation is used in the primary prevention of LD, focussing on the different water sources to which the general public is exposed. For 10 years, secondary prevention of LD in the Netherlands has been organised using an outbreak detection programme that eliminates potential sources of infection that LD patients have been exposed to during their incubation period. To evaluate the two prevention strategies, we compared the distribution of Legionella pneumophila serogroup 1 genotypes isolated from patient material (n = 179) with the distribution resulting from primary (n = 182) and secondary (n = 60) prevention actions, respectively. The sequence type profiles were generated using the HiMLST method that employs next generation sequencing. We found that genotypes collected during primary prevention differ to a large extent from those isolated from patients. Genotypes collected during secondary prevention efforts had a greater similarity to that of patient isolates, but could be further improved. Our results suggest that primary prevention is not aiming at the correct reservoir, whereas secondary prevention is only partially focussed. It seems that there is a still unknown reservoir. PMID:23430195

  5. First isolation and genotyping of Toxoplasma gondii from free-range chickens on São Luis island, Maranhão state, Brazil, with a new genotype described.

    Science.gov (United States)

    Sousa, I C; Pena, H F J; Santos, L S; Gennari, S M; Costa, F N

    2016-06-15

    Toxoplasma gondii is a protozoan with worldwide distribution that infects warm-blooded vertebrates, including humans. Toxoplasma is considered to be monospecific, but three classical clonal lineages (Types I-III) have been described, especially for isolates from North America and Europe. However, recently, several studies have shown that many isolates, particularly from South America, are different from the classic types and highly diverse, with the presence of specific clonal lineages and non-archetypal genotypes. In order to isolate and genotypically characterize T. gondii, 60 free-range naturally infected chickens (Gallus domesticus) from four municipalities on São Luis island, state of Maranhão, Brazil, were first serologically screened for IgG anti-T. gondii antibodies by means of the immunofluorescent antibody test (IFAT≥1:16). Heart and brain samples from seropositive chickens were bioassayed in mice. The isolates obtained from bioassaying were genotyped by means of PCR-RFLP (restriction fragment length polymorphism) using 11 markers and by microsatellites (MS) using 15 markers. The frequency of anti-T. gondii antibodies in the chickens examined was 25.0% (15/60). Five isolates of T. gondii were obtained and named TgCkBrMA1 to 5. Four genotypes were described. One of them is reported for the first time. No classic clonal lineages of types I, II or III were found, but the Brazilian clonal lineage BrI was identified. MS analysis revealed five genotypes. The results corroborate studies already developed in other regions of Brazil, thus indicating that T. gondii has high genetic diversity in Brazil. PMID:27198795

  6. HIV-1 genotypic resistance profile of patients failing antiretroviral therapy in Paraná, Brazil

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    Paula Virginia Michelon Toledo

    2010-08-01

    Full Text Available Antiretroviral therapy (ART has reduced morbidity and mortality related to human immunodeficiency virus (HIV infection, but in spite of this advance, HIV mutations decrease antiretroviral susceptibility, thus contributing to treatment failure in patients. Genotyping HIV-1 allows the selection of new drugs after initial drug failure. This study evaluated the genotypic profile of HIV-1 isolates from treated (drug-experienced patients in Paraná, Brazil. The prevalence of mutations in reverse transcriptase (RT and protease (PR genes were assessed. We analyzed 467 genotypes of patients with HIV-1 viral loads above 1,000 copies/mL. Mutations at HIV-1 RT and PR genes and previously used ART regimens were recorded. The most prevalent RT mutations were: 184V (68.31%, 215YF (51.6%, 103NS (46%, 41L (39.4%, 67N (38.54%, 210W (23.5%, 190ASE (23.2%, and 181C (17.4%. PR mutations were 90M (33.33%, 82ATFS (29%, 46I (26.8% and 54V (22.2%. The prevalence of mutations was in line with previous national and international reports, except to nonnucleoside analogue reverse transcriptase inhibitors related mutations, which were more prevalent in this study. Previous exposure to antiretroviral drugs was associated with genotypic resistance to specific drugs, leading to treatment failure in HIV patients.

  7. A Sign of Superspreading in Tuberculosis Highly Skewed Distribution of Genotypic Cluster Sizes

    NARCIS (Netherlands)

    Ypma, Rolf J. F.; Altes, Hester Korthals; van Soolingen, Dick; Wallinga, Jacco; van Ballegooijen, W. Marijn

    2013-01-01

    Background: Molecular typing is a valuable tool for gaining insight into spread of Mycobacterium tuberculosis. Typing allows for clustering of cases whose isolates share an identical genotype, revealing epidemiologic relatedness. Observed distributions of genotypic cluster sizes of tuberculosis (TB)

  8. A sign of superspreading in tuberculosis: highly skewed distribution of genotypic cluster sizes.

    NARCIS (Netherlands)

    Ypma, R.J.; Altes, H.K.; Soolingen, D. van; Wallinga, J.; Ballegooijen, W.M. van

    2013-01-01

    BACKGROUND: Molecular typing is a valuable tool for gaining insight into spread of Mycobacterium tuberculosis. Typing allows for clustering of cases whose isolates share an identical genotype, revealing epidemiologic relatedness. Observed distributions of genotypic cluster sizes of tuberculosis (TB)

  9. Diversity of genotypes in CTX-M-producing Klebsiella pneumoniae isolated in different hospitals in Brazil

    Directory of Open Access Journals (Sweden)

    Thiago Pavoni Gomes Chagas

    2011-10-01

    Full Text Available OBJECTIVE: The present study was undertaken to characterize CTX-M ESBL-producing Klebsiella pneumoniae collected from hospitals in different cities of Brazil. MATERIAL AND METHODS: Eighty-five K. pneumoniae strains isolated from hospitalized patients in six different hospitals of three cities of Brazil were analyzed. ESBL production was confirmed by the standard double-disk synergy test and the Etest®. The MIC50 and MIC90 for ESBL-producing isolates were determined by the Etest® method. The antimicrobial susceptibilities of bacterial isolates were determined using the agar diffusion method according to the CLSI. Screening for blaTEM, blaSHV, blaCTX-M genes and class 1 integron was performed by PCR amplification. To determine the genomic diversity of CTX-M-producers, isolates were analyzed by macrorestriction profile analysis following PFGE. RESULTS AND DISCUSSION: Seventy-one K. pneumoniae isolates were ESBL-producing. PCR and sequencing experiments detected 38 CTX-M-producing K. pneumoniae belonged to groups CTX-M 1, CTX-M 2, CTX-M 8 and CTX-M 9. The association of different types ESBL (CTX-M, SHV and TEM was frequent. All K. pneumoniae isolates carried class 1 integron. PFGE analysis revealed thirty-one clonal types among CTX-M-producing isolates. The data presented herein illustrate the diversity of genotypes of CTX-M producing K. pneumoniae among Brazilians hospitals.

  10. Genotypic and antimicrobial characterization of pathogenic bacteria at different stages of cattle slaughtering in southern Brazil.

    Science.gov (United States)

    Loiko, Márcia R; de Paula, Cheila M D; Langone, Ana C J; Rodrigues, Rochele Q; Cibulski, Samuel; Rodrigues, Rogério de O; Camargo, Anderson C; Nero, Luís A; Mayer, Fabiana Q; Tondo, Eduardo C

    2016-06-01

    Meat can be contaminated in different stages of the slaughtering process and the identification of these stages is the starting point to implement adequate control measures. The objectives of this study were to assess the presence of pathogenic microorganisms in cattle carcasses, to identify the most important contamination points of the slaughtering process, and to evaluate the possible risk factors related to them in a cattle slaughterhouse. To this aim, 108 cattle carcasses were sampled at three stages of the slaughtering process: Point 1 (hides after bleeding); Point 2 (carcasses after hide removal); and Point 3 (carcasses immediately after division). Escherichia coli O157:H7, Listeria monocytogenes and Salmonella Livingstone were isolated from the carcasses. Phenotypic and genotypic characterization indicated that there was cross-contamination among animals, since bacteria with identical genotypic and phenotypic profiles were isolated from different animals at the same sampling day. Furthermore, this is the first report about the isolation of E. coli O157:H7 in a bovine slaughterhouse from southern Brazil. PMID:26896744

  11. Global geographic distribution of Trichinella species and genotypes.

    Science.gov (United States)

    Feidas, Haralambos; Kouam, Marc K; Kantzoura, Vaia; Theodoropoulos, Georgios

    2014-08-01

    Maximum entropy ecological niche modeling was utilized to describe the global geographic distribution of Trichinella species and genotypes and to assess their invasive risk in new areas other than the ones currently known. Also, space-time scan statistic was utilized to identify global spatiotemporal clusters of infection. A database containing 3209 records for 12 species and genotypes identified at the International Trichinella Reference Center (ITRC) as well as climate, elevation, and land cover data extracted from various databases were used. Ecological niche modeling implemented in the Maxent program indicated new potential ranges for T. spiralis (T1), T. nativa (T2), T. britovi (T3), T. pseudospiralis (T4), T. murrelli (T5), T6, T. papuae (T10), and T. zimbabwensis (T11). The area under the curve values for the test data of the models ranged from 0.901 to 0.998, indicating that the models were very good to excellent. The most important bioclimatic factor in modeling the ranges for T. spiralis (T1), T. nativa (T2), T. britovi (T3), T6, and T. zimbabwensis (T11) was temperature, for T. pseudospiralis (T4) and T. papuae (T10) was precipitation, and for T. murrelli (T5) was land cover. T. spiralis (T1), T. britovi (T3), and T. pseudospiralis (T4) had the same primary land cover which was "Grass Crops". The primary land covers were "Conifer Boreal Forest" for T. nativa (T2), "Cool Fields and Woods" for T. murrelli (T5), "Upland Tundra" for T6, "Tropical Rainforest" for T. papuae (T10), and "Crops and Town" for T. zimbabwensis (T11). The scan statistic analyses revealed the presence of significant spatiotemporal clusters (ppseudospiralis (T4), T. murrelli (T5), T6, and T. nelsoni (T7). No significant clusters were found for T. papuae (T10) and T. zimbabwensis (T11). PMID:24951834

  12. Potential geographic distribution of hantavirus reservoirs in Brazil.

    Directory of Open Access Journals (Sweden)

    Stefan Vilges de Oliveira

    Full Text Available Hantavirus cardiopulmonary syndrome is an emerging zoonosis in Brazil. Human infections occur via inhalation of aerosolized viral particles from excreta of infected wild rodents. Necromys lasiurus and Oligoryzomys nigripes appear to be the main reservoirs of hantavirus in the Atlantic Forest and Cerrado biomes. We estimated and compared ecological niches of the two rodent species, and analyzed environmental factors influencing their occurrence, to understand the geography of hantavirus transmission. N. lasiurus showed a wide potential distribution in Brazil, in the Cerrado, Caatinga, and Atlantic Forest biomes. Highest climate suitability for O. nigripes was observed along the Brazilian Atlantic coast. Maximum temperature in the warmest months and annual precipitation were the variables that most influence the distributions of N. lasiurus and O. nigripes, respectively. Models based on occurrences of infected rodents estimated a broader area of risk for hantavirus transmission in southeastern and southern Brazil, coinciding with the distribution of human cases of hantavirus cardiopulmonary syndrome. We found no demonstrable environmental differences among occurrence sites for the rodents and for human cases of hantavirus. However, areas of northern and northeastern Brazil are also apparently suitable for the two species, without broad coincidence with human cases. Modeling of niches and distributions of rodent reservoirs indicates potential for transmission of hantavirus across virtually all of Brazil outside the Amazon Basin.

  13. GENOTYPE BY ENVIRONMENT INTERACTIONS IN Pinus taeda L. IN SOUTH AND SOUTH-EAST BRAZIL

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    Estefano Paludzyszyn Filho

    2001-01-01

    Full Text Available Genotype x environment interactions of stem volume were investigated by assessing the variation in 46 open-pollinated loblolly pine (Pinus taeda L. families from first-generation cloned seed orchard in four genetic trials in the south and south-east Brazil. They were used to obtain least squares and restricted maximum likelihood (REML estimates of variance components. Familie-by- trial interaction effects were evaluated by adjusting the mixed univariate model that contained data of two and four places tested by the likelihood ratio test. Breeding values from local data (univarate procedure and predicted to the others sites (multivariate procedure were obtained from best linear unbiased prediction (BLUP. The adjusted and average (obtained from local and predicted to other sites breeding values were used to select parents and trees. The interaction effects and the adjusting of the mixed models were statistically significant, respectively, by F test and by likelihood ratio test. The loss of potential gain, sustained by not selecting the best families by site was 3.2%. For parents, the loss in mean productivity by indirect selection was respectively 2.3%. In the individual tree selection for seedling seed orchard, no loss of potential gain was observed when selection was carried by average genetic breeding values. For clonal seed orchard with the selection of ten more greater genetic breeding values trees, the interaction cause a inflation of 2% in the average productivity. In this case, the selection by average breeding values was the best procedure and may prove to be a useful tool, in selection stem volume, when genotype x environment interaction is significant.

  14. Porphyromonas gingivalis Fim-A genotype distribution among Colombians

    Science.gov (United States)

    Jaramillo, Adriana; Parra, Beatriz; Botero, Javier Enrique; Contreras, Adolfo

    2015-01-01

    Introduction: Porphyromonas gingivalis is associated with periodontitis and exhibit a wide array of virulence factors, including fimbriae which is encoded by the FimA gene representing six known genotypes. Objetive: To identify FimA genotypes of P. gingivalis in subjects from Cali-Colombia, including the co-infection with Aggregatibacter actinomycetemcomitans, Treponema denticola, and Tannerella forsythia. Methods: Subgingival samples were collected from 151 people exhibiting diverse periodontal condition. The occurrence of P. gingivalis, FimA genotypes and other bacteria was determined by PCR. Results: P. gingivalis was positive in 85 patients. Genotype FimA II was more prevalent without reach significant differences among study groups (54.3%), FimA IV was also prevalent in gingivitis (13.0%). A high correlation (p= 0.000) was found among P. gingivalis, T. denticola, and T. forsythia co-infection. The FimA II genotype correlated with concomitant detection of T. denticola and T. forsythia. Conclusions: Porphyromonas gingivalis was high even in the healthy group at the study population. A trend toward a greater frequency of FimA II genotype in patients with moderate and severe periodontitis was determined. The FimA II genotype was also associated with increased pocket depth, greater loss of attachment level, and patients co-infected with T. denticola and T. forsythia. PMID:26600627

  15. Evidence for the co-circulation of dengue virus type 3 genotypes III and V in the Northern region of Brazil during the 2002-2004 epidemics

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    Meri Bordignon Nogueira

    2008-08-01

    Full Text Available The reintroduction of dengue virus type 3 (DENV-3 in Brazil in 2000 and its subsequent spread throughout the country was associated with genotype III viruses, the only DENV-3 genotype isolated in Brazil prior to 2002. We report here the co-circulation of two different DENV-3 genotypes in patients living in the Northern region of Brazil during the 2002-2004 epidemics. Complete genomic sequences of viral RNA were determined from these epidemics, and viruses belonging to genotypes V (Southeast Asia/South Pacific and III were identified. This recent co-circulation of different DENV-3 genotypes in South America may have implications for pathological and epidemiological dynamics.

  16. Phenotype adaptability and stability of sugarcane genotypes in the sugarcane belt of the state of Pernambuco, Brazil.

    Science.gov (United States)

    Dutra Filho, J A; Junior, T C; Simões Neto, D E

    2014-01-01

    We assessed the agroindustrial performance of 25 sugarcane genotypes adapted to the edaphoclimatic conditions of the State of Pernambuco, Brazil, within the microregions Mata Norte, Mata Sul, Região Central, Litoral Norte, and Litoral Sul. The variables analyzed were POL tonnage per hectare, sugarcane tonnage per hectare, fiber and total recoverable sugar tonnage per hectare, using a randomized block design with four repetitions. Combined variance of experiments, genetic parameter estimates, decomposition of the genotype-environment interaction, and environment stratification were analyzed. Phenotype adaptability and stability were also analyzed. The various genotypes presented great potential for improvement and a similar response pattern to the microregions Centro and Mata Sul of the state of Pernambuco. Genotypes RB863129, RB867515, RB92579, RB953180, SP81-3250, RB75126, and RB942520 were better in productivity and phenotype adaptability and stability compared to genotypes RB892700, RB943365, SP79-1011, Q138, RB943538, SP78-4764, RB953281, RB943066, RB928064, RB93509, RB72454, RB952675, RB952991, RB943161, RB942898, RB872552, RB952900, and RB942849. These genotypes are recommended as cultivation options in the sugarcane belt in the state of Pernambuco, since they stand out in terms of phenotype adaptability and stability as evaluated using the method by Annicchiarico, Lin and Bins, and the method by Eberhart and Russel. PMID:25177966

  17. Human Papillomavirus Genotype Distribution in Invasive Cervical Cancer in Pakistan.

    Science.gov (United States)

    Loya, Asif; Serrano, Beatriz; Rasheed, Farah; Tous, Sara; Hassan, Mariam; Clavero, Omar; Raza, Muhammad; De Sanjosé, Silvia; Bosch, F Xavier; Alemany, Laia

    2016-01-01

    Few studies have assessed the burden of human papillomavirus (HPV) infection in Pakistan. We aim to provide specific information on HPV-type distribution in invasive cervical cancer (ICC) in the country. A total of 280 formalin-fixed paraffin-embedded tissue blocks were consecutively selected from Shaukat Khanum Memorial Cancer Hospital and Research Centre (Lahore, Pakistan). HPV-DNA was detected by SPF10 broad-spectrum PCR followed by DNA enzyme immunoassay and genotyping by LiPA25. HPV-DNA prevalence was 87.5% (95%CI: 83.0-91.1), with 96.1% of cases histologically classified as squamous cell carcinoma. Most of the HPV-DNA positive cases presented single infections (95.9%). HPV16 was the most common type followed by HPV18 and 45. Among HPV-DNA positive, a significantly higher contribution of HPV16/18 was detected in Pakistan (78.4%; 72.7-83.3), compared to Asia (71.6%; 69.9-73.4) and worldwide (70.8%; 69.9-71.8) and a lower contribution of HPVs31/33/45/52/58 (11.1%; 7.9-15.7 vs. 19.8%; 18.3-21.3 and 18.5%; 17.7-19.3). HPV18 or HPV45 positive ICC cases were significantly younger than cases infected by HPV16 (mean age: 43.3, 44.4, 50.5 years, respectively). A routine cervical cancer screening and HPV vaccination program does not yet exist in Pakistan; however, the country could benefit from national integrated efforts for cervical cancer prevention and control. Calculated estimations based on our results show that current HPV vaccine could potentially prevent new ICC cases. PMID:27483322

  18. Distribution and heterogeneity of hepatitis C genotypes in hepatitis patients in Cameroon.

    Science.gov (United States)

    Pasquier, Christophe; Njouom, Richard; Ayouba, Ahidjo; Dubois, Martine; Sartre, Michèle Tagni; Vessière, Aurelia; Timba, Isabelle; Thonnon, Jocelyn; Izopet, Jacques; Nerrienet, Eric

    2005-11-01

    Hepatitis C virus infects humans world-wide. The virus genome varies greatly and it has several genotypes. HCV infection is highly prevalent in Central Africa and Cameroon. Initial studies on the genetic variability of HCV showed infection with HCV genotypes 1, 2, and 4. We have now sequenced the NS5b and E2 regions of 156 HCV isolates collected from patients presenting for diagnosis in Yaounde and used the data to describe the distribution of HCV genotypes and subtypes in patients with hepatitis in Cameroon. Genotype 1 was more frequent than Genotypes 4 and 2. Genotypes 1 and 4 were highly heterogeneous, containing many subtypes described previously (1b, 1c, 1e, 1h, 1l, 4f, 4t, 4p, 4k) and unsubtyped groups. There was a systematic phylogenetic concordance between NS5b and E2 sequence clustering. The Genotype 2 sequences did not vary. Neither subject age nor gender influenced HCV distribution. HCV Genotypes 1 and 4 are very heterogeneous in Cameroon, perhaps due to ancient infections. The homogeneity of HCV Genotype 2 indicates its more recent introduction from western Africa. PMID:16173014

  19. Distribution of Candida albicans genotypes among family members

    Science.gov (United States)

    Mehta, S. K.; Stevens, D. A.; Mishra, S. K.; Feroze, F.; Pierson, D. L.

    1999-01-01

    Thirty-three families (71 subjects) were screened for the presence of Candida albicans in mouthwash or stool specimens; 12 families (28 subjects) were culture-positive for this yeast. An enrichment procedure provided a twofold increase in the recovery of C. albicans from mouthwash specimens. Nine of the twelve culture-positive families had two positive members each, two families had three positive members each, and one family had four positive members. Genetic profiles were obtained by three methods: pulsed-field gel electrophoresis; restriction endonuclease analysis, and random amplification of polymorphic DNA analysis. DNA fingerprinting of C. albicans isolated from one body site three consecutive times revealed that each of the 12 families carried a distinct genotype. No two families shared the same strain, and two or more members of a family commonly shared the same strain. Intrafamily genotypic identity (i.e., each member within the family harbored the same strain) was demonstrated in six families. Genotypes of isolates from husband and wife differed from one another in five families. All three methods were satisfactory in determining genotypes; however, we concluded that restriction endonuclease analysis provided adequate resolving power.

  20. Distribution of hepatitis C virus genotypes among hemodialysis patients in Tehran--a multicenter study.

    Science.gov (United States)

    Hosseini-Moghaddam, Seyed Mohammadmehdi; Keyvani, Hossein; Kasiri, Hossein; Kazemeyni, Seyed Mohammad; Basiri, Abbas; Aghel, Nazanin; Alavian, Seyed-Moayed

    2006-05-01

    Hepatitis C virus has substantial heterogeneity of genotypes throughout the world. The aim of this study was to determine the frequency of HCV genotypes, risk factors and clinical implications in cases of hemodialysis living in Tehran. A total of 155 patients treated by hemodialysis, who had been identified to be anti-HCV positive at 45 medical centers in Tehran, were enrolled. Genotyping was using restriction fragment length polymorphism (RFLP) on HCV-RNA positive samples. HCV-RNA was detected in 66 (42.6%) patients. Genotyping of HCV-RNA positive serum samples demonstrated that subtypes 3a and 1a were predominant accounting for 30.3 and 28.8%, respectively. The distribution of other HCV genotypes showed genotype 1b, 18.2%; genotype 4, 16.7%; mixed genotypes 1a and 1b, 3%; and genotype 3b, 3%. Genotype 2 was not detected in this study. Statistically significant differences were identified between HCV infected and non-HCV infected patients regarding history of hemodialysis unit changes more than two times (P = 0.01), and history of hemodialysis for more than 20 years (P = 0.02). However, blood transfusion, mean duration of hemodialysis therapy and the history of solid organ transplantation did not differ between these two groups. This study indicates that the dominant HCV genotypes among patients treated by hemodialysis living in Tehran were 3a and 1a, and considering previous reports from the general population, genotype 4 was strongly associated with hemodialysis. The duration of treatment by hemodialysis and, in turn, more hemodialysis unit changes will lead to more frequent HCV infections. PMID:16555284

  1. HCV genotype distribution and possible transmission risks in Lahore, Pakistan

    Institute of Scientific and Technical Information of China (English)

    Waqar; Ahmad; Bushra; Ijaz; Fouzia; Tahir; Javed; Shah; Jahan; Imran; Shahid; Fawad; Mumtaz; Khan; Sajida; Hassan

    2010-01-01

    AIM: To investigate the prevalence of hepatitis C virus (HCV) genotypes and their association with possible transmission routes in the general population of Lahore, as the data exclusively related to this city is limited. METHODS: Complete data regarding patient's history, possible route of infection and biochemical tests was collected from the public hospital for 1364 patients. SPSS version 16 windows software was used for data analysis by univariate and multivariate techniques. RESULTS: Age range ≤ 40 yea...

  2. The electrical power transmission and distribution market in Brazil

    International Nuclear Information System (INIS)

    Brazil, the largest country in South America, is also the largest consumer of energy with a total installed electrical generating capacity of 68,000 megawatts. Brazil has an estimated value of $2.96 billion invested in electrical power equipment and a sector that is growing at a rate of 4.2 per cent per year. Hydroelectric power accounts for 93 per cent of the total power generation, with thermal generation providing the balance. It is expected that hydroelectric power will decrease to about 80 per cent and thermal power generation will increase by 20 per cent in the next decade. Existing thermal power plants in Brazil are mainly fuel-oil based, followed by coal and then nuclear. The North/Northeast and South/Southeast networks which controlled power transmission in Brazil up until the late 1990s, were recently joined by a 1277 km line forming the North/South interconnection. Despite this, the system does not reach about 100,000 rural communities that must currently rely on unstable stand-alone power generation plants. An new 3638 km long national transmission line is being planned for 2007 to meet the energy needs of these off-grid communities. Electrobras, the Brazilian government's electric power sector holding company, is promoting two programs to expand power distribution and transmission through the country. These programs could provide potential opportunities for Canadian electrical equipment companies. A tariff of 8-18 per cent is levied against all electric power distribution and transmission equipment entering Brazil. Port charges and internal taxes are also applied. refs

  3. Analysis of Mycobacterium tuberculosis Genotypic Lineage Distribution in Chile and Neighboring Countries.

    Science.gov (United States)

    Lagos, Jaime; Couvin, David; Arata, Loredana; Tognarelli, Javier; Aguayo, Carolina; Leiva, Tamara; Arias, Fabiola; Hormazabal, Juan Carlos; Rastogi, Nalin; Fernández, Jorge

    2016-01-01

    Tuberculosis (TB), caused by the pathogen Mycobacterium tuberculosis (MTB), remains a disease of high importance to global public health. Studies into the population structure of MTB have become vital to monitoring possible outbreaks and also to develop strategies regarding disease control. Although Chile has a low incidence of MTB, the current rates of migration have the potential to change this scenario. We collected and analyzed a total of 458 M. tuberculosis isolates (1 isolate per patient) originating from all 15 regions of Chile. The isolates were genotyped using the spoligotyping method and the data obtained were analyzed and compared with the SITVIT2 database. A total of 169 different patterns were identified, of which, 119 patterns (408 strains) corresponded to Spoligotype International Types (SITs) and 50 patterns corresponded to orphan strains. The most abundantly represented SITs/lineages were: SIT53/T1 (11.57%), SIT33/LAM3 (9.6%), SIT42/LAM9 (9.39%), SIT50/H3 (5.9%), SIT37/T3 (5%); analysis of the spoligotyping minimum spanning tree as well as spoligoforest were suggestive of a recent expansion of SIT42, SIT50 and SIT37; all of which potentially evolved from SIT53. The most abundantly represented lineages were LAM (40.6%), T (34.1%) and Haarlem (13.5%). LAM was more prevalent in the Santiago (43.6%) and Concepción (44.1%) isolates, rather than the Iquique (29.4%) strains. The proportion of X lineage was appreciably higher in Iquique and Concepción (11.7% in both) as compared to Santiago (1.6%). Global analysis of MTB lineage distribution in Chile versus neighboring countries showed that evolutionary recent lineages (LAM, T and Haarlem) accounted together for 88.2% of isolates in Chile, a pattern which mirrored MTB lineage distribution in neighboring countries (n = 7378 isolates recorded in SITVIT2 database for Peru, Brazil, Paraguay, and Argentina; and published studies), highlighting epidemiological advantage of Euro-American lineages in this region

  4. Stability and adaptability of carioca common bean genotypes in states of the central South Region of Brazil

    Directory of Open Access Journals (Sweden)

    Helton Santos Pereira

    2009-01-01

    Full Text Available The purpose of this study was to identify ‘Carioca’ common bean genotypes with high yield adaptability andstability in central South Brazil, based on different analysis methods. The value of cultivation and use (VCU of 16 genotypeswas evaluated in 26 trials in a randomized complete block design with three replications, in the states of Santa Catarina, SãoPaulo and Paraná, in 2003 and 2004. Grain yield data were subjected to analysis of variance, of stability and adaptability,using the methodologies of Lin and Binns, Annichiarico, Eberhart and Russell, Cruz et al. and AMMI. Several of themethodologies indicated the genotypes BRS Estilo and CNFC 9518 for high yield, high adaptability and high stability. Theyield, stability and adaptability of cultivar Pérola, widely grown in the country, were lower than of the new elite genotypesobtained by the breeding programs.

  5. Prevalence and genotype distribution of rotaviruses in children with gastroenteritis in Rize province

    Directory of Open Access Journals (Sweden)

    Selim Dereci

    2015-07-01

    Full Text Available Determination of the distribution of rotavirus genotypes is essential for understanding the epidemiology of this virus responsible for nearly half a million of deaths in patients with gastroenteritis worldwide. In the present study, we aimed to genotype the rotavirus strains isolated from diarrheal stool samples in children under 5 years old. A total of 1297 fecal samples were collected, and rotavirus antigen was detected in 73 of these samples. Antigen-positive samples were transferred to the Public Health Agency of Turkey, Molecular Microbiology Research Laboratory, and were tested for determination of genotypes G and P using semi-nested multiplex polymerase chain reaction method performed with consensus- and genotype-specific primers. Twelve specimens were found to be negative for rotavirus in genotyping method. All the positive-strains were in G1-4, G8-9, P(4, P(8, and P(9 genotypes. The most frequent GP genotype combinations were found to be G9P(8 in 21 strains (34.4%, G2P(4 in 14 strains (23.0%, and G1P(8 in 12 strains (19.7%. We found 10 distinct genotypes amongst a total of 61 strains. Among the strains isolated and genotyped in our study, 90.2% (55/61 and 67.2% (41/61 have already been included in the two existing commercial vaccines. In conclusion, these findings implicate the necessity of development of region-specific vaccines after evaluation of the local genotype distribution. Further studies on the large number of rotavirus strains would contribute to this process. 

  6. Distribution of Hepatitis C virus genotypes in Dubai, United Arab Emirates

    International Nuclear Information System (INIS)

    Objective: To determine the distribution of HCV genotypes among the patients attending a tertiary care hospital in Dubai, UAE. Methods: This was a descriptive study conducted from January 2009 to June 2009 in the Medical and Infectious Diseases clinics at Rashid Hospital Dubai. The study was designed to include patient's demographics, clinical information including the various risk factors for the transmission of HCV and laboratory data. The patients with positive screening test for HCV antibodies referred from the other clinics and peripheral health centers were included in the study. The HBV and HIV positive, as well as patients on haemodialysis and on immunosuppressive drugs were excluded from the study. The blood sample was collected and the confirmation of HCV was done by Western blot. The confirmed cases were subjected for HCV RNA levels and subsequently for HCV geno typing and sub-typing. Results: A total of 223 patients (124 UAE nationals and 99 expatriates) fulfilled the inclusion criteria. The mean age of the patients was 38.3 +- 11.4 years. Most of the study patients were males (82.2%). Among the UAE nationals, 49.2% had genotype 1, 34.6% had 3, 14.5% had 4 and only 1.6% patients had genotype 2. High prevalence (68.4%) of genotype 1 was also observed in Iranian patients, while, 96.4% Egyptians had genotype 4 and 77.2% Pakistanis had genotype 3. The patients with genotype 1 had significantly high HCV RNA levels than the patients with genotype 3 and 4, p< .001 and < .009 respectively. Conclusion: In this study high prevalence of genotype 1 followed by 3 and 4 was seen in UAE nationals which is in contrast to the earlier reports of genotypes 4 being most common in Middle East countries. Among expatriates, genotype 1 was common in Iranians, 4 in Egyptians and 3 in Pakistanis. (author)

  7. Genotyping of human parvovirus B19 in clinical samples from Brazil and Paraguay using heteroduplex mobility assay, single-stranded conformation polymorphism and nucleotide sequencing

    Directory of Open Access Journals (Sweden)

    Marcos César Lima de Mendonça

    2011-06-01

    Full Text Available Heteroduplex mobility assay, single-stranded conformation polymorphism and nucleotide sequencing were utilised to genotype human parvovirus B19 samples from Brazil and Paraguay. Ninety-seven serum samples were collected from individuals presenting with abortion or erythema infectiosum, arthropathies, severe anaemia and transient aplastic crisis; two additional skin samples were collected by biopsy. After the procedure, all clinical samples were classified as genotype 1.

  8. Genotypic distribution of hepatitis C virus in Thailand and Southeast Asia.

    Science.gov (United States)

    Wasitthankasem, Rujipat; Vongpunsawad, Sompong; Siripon, Nipaporn; Suya, Chutima; Chulothok, Phrutsada; Chaiear, Kasemporn; Rujirojindakul, Pairaya; Kanjana, Sawan; Theamboonlers, Apiradee; Tangkijvanich, Pisit; Poovorawan, Yong

    2015-01-01

    The majority of hepatitis C virus (HCV) infection results in chronic infection, which can lead to liver cirrhosis and hepatocellular carcinoma. Global burden of hepatitis C virus (HCV) is estimated at 150 million individuals, or 3% of the world's population. The distribution of the seven major genotypes of HCV varies with geographical regions. Since Asia has a high incidence of HCV, we assessed the distribution of HCV genotypes in Thailand and Southeast Asia. From 588 HCV-positive samples obtained throughout Thailand, we characterized the HCV 5' untranslated region, Core, and NS5B regions by nested PCR. Nucleotide sequences obtained from both the Core and NS5B of these isolates were subjected to phylogenetic analysis, and genotypes were assigned using published reference genotypes. Results were compared to the epidemiological data of HCV genotypes identified within Southeast Asian. Among the HCV subtypes characterized in the Thai samples, subtype 3a was the most predominant (36.4%), followed by 1a (19.9%), 1b (12.6%), 3b (9.7%) and 2a (0.5%). While genotype 1 was prevalent throughout Thailand (27-36%), genotype 3 was more common in the south. Genotype 6 (20.9%) constituted subtype 6f (7.8%), 6n (7.7%), 6i (3.4%), 6j and 6m (0.7% each), 6c (0.3%), 6v and 6xa (0.2% each) and its prevalence was significantly lower in southern Thailand compared to the north and northeast (p = 0.027 and p = 0.030, respectively). Within Southeast Asia, high prevalence of genotype 6 occurred in northern countries such as Myanmar, Laos, and Vietnam, while genotype 3 was prevalent in Thailand and Malaysia. Island nations of Singapore, Indonesia and Philippines demonstrated prevalence of genotype 1. This study further provides regional HCV genotype information that may be useful in fostering sound public health policy and tracking future patterns of HCV spread. PMID:25962112

  9. Genotypic distribution of hepatitis C virus in Thailand and Southeast Asia.

    Directory of Open Access Journals (Sweden)

    Rujipat Wasitthankasem

    Full Text Available The majority of hepatitis C virus (HCV infection results in chronic infection, which can lead to liver cirrhosis and hepatocellular carcinoma. Global burden of hepatitis C virus (HCV is estimated at 150 million individuals, or 3% of the world's population. The distribution of the seven major genotypes of HCV varies with geographical regions. Since Asia has a high incidence of HCV, we assessed the distribution of HCV genotypes in Thailand and Southeast Asia. From 588 HCV-positive samples obtained throughout Thailand, we characterized the HCV 5' untranslated region, Core, and NS5B regions by nested PCR. Nucleotide sequences obtained from both the Core and NS5B of these isolates were subjected to phylogenetic analysis, and genotypes were assigned using published reference genotypes. Results were compared to the epidemiological data of HCV genotypes identified within Southeast Asian. Among the HCV subtypes characterized in the Thai samples, subtype 3a was the most predominant (36.4%, followed by 1a (19.9%, 1b (12.6%, 3b (9.7% and 2a (0.5%. While genotype 1 was prevalent throughout Thailand (27-36%, genotype 3 was more common in the south. Genotype 6 (20.9% constituted subtype 6f (7.8%, 6n (7.7%, 6i (3.4%, 6j and 6m (0.7% each, 6c (0.3%, 6v and 6xa (0.2% each and its prevalence was significantly lower in southern Thailand compared to the north and northeast (p = 0.027 and p = 0.030, respectively. Within Southeast Asia, high prevalence of genotype 6 occurred in northern countries such as Myanmar, Laos, and Vietnam, while genotype 3 was prevalent in Thailand and Malaysia. Island nations of Singapore, Indonesia and Philippines demonstrated prevalence of genotype 1. This study further provides regional HCV genotype information that may be useful in fostering sound public health policy and tracking future patterns of HCV spread.

  10. Genotypic Distribution of Hepatitis C Virus in Thailand and Southeast Asia

    Science.gov (United States)

    Wasitthankasem, Rujipat; Vongpunsawad, Sompong; Siripon, Nipaporn; Suya, Chutima; Chulothok, Phrutsada; Chaiear, Kasemporn; Rujirojindakul, Pairaya; Kanjana, Sawan; Theamboonlers, Apiradee; Tangkijvanich, Pisit; Poovorawan, Yong

    2015-01-01

    The majority of hepatitis C virus (HCV) infection results in chronic infection, which can lead to liver cirrhosis and hepatocellular carcinoma. Global burden of hepatitis C virus (HCV) is estimated at 150 million individuals, or 3% of the world’s population. The distribution of the seven major genotypes of HCV varies with geographical regions. Since Asia has a high incidence of HCV, we assessed the distribution of HCV genotypes in Thailand and Southeast Asia. From 588 HCV-positive samples obtained throughout Thailand, we characterized the HCV 5’ untranslated region, Core, and NS5B regions by nested PCR. Nucleotide sequences obtained from both the Core and NS5B of these isolates were subjected to phylogenetic analysis, and genotypes were assigned using published reference genotypes. Results were compared to the epidemiological data of HCV genotypes identified within Southeast Asian. Among the HCV subtypes characterized in the Thai samples, subtype 3a was the most predominant (36.4%), followed by 1a (19.9%), 1b (12.6%), 3b (9.7%) and 2a (0.5%). While genotype 1 was prevalent throughout Thailand (27–36%), genotype 3 was more common in the south. Genotype 6 (20.9%) constituted subtype 6f (7.8%), 6n (7.7%), 6i (3.4%), 6j and 6m (0.7% each), 6c (0.3%), 6v and 6xa (0.2% each) and its prevalence was significantly lower in southern Thailand compared to the north and northeast (p = 0.027 and p = 0.030, respectively). Within Southeast Asia, high prevalence of genotype 6 occurred in northern countries such as Myanmar, Laos, and Vietnam, while genotype 3 was prevalent in Thailand and Malaysia. Island nations of Singapore, Indonesia and Philippines demonstrated prevalence of genotype 1. This study further provides regional HCV genotype information that may be useful in fostering sound public health policy and tracking future patterns of HCV spread. PMID:25962112

  11. HPV genotype distribution in older Danish women undergoing surgery due to cervical cancer

    DEFF Research Database (Denmark)

    Hammer, Anne; Mejlgaard, Else; Gravitt, Patti;

    2015-01-01

    INTRODUCTION: The prevalence of human papillomavirus (HPV)16/18 in cervical cancer may decrease with age. This study aimed to describe the HPV genotype distribution in Danish women aged 55 years or older with cervical cancer. MATERIAL AND METHODS: In this cross-sectional study we identified 153...... cases of cervical cancer diagnosed at Aarhus University Hospital, Denmark (1990-2012) and Copenhagen University Hospital Herlev, Denmark (2007-2012). All women had surgery to treat the disease. HPV genotyping was performed on cervical cancer tissue using the INNO LiPA HPV genotyping extra (Fujirebio......, Belgium) at the Department of Pathology, Aarhus University Hospital, Denmark. The main outcome was to estimate the age-specific prevalence of high-risk HPV genotypes included in the bivalent, the quadrivalent, and the nonavalent vaccine. RESULTS: Of 121 cases of cervical cancer included in this study, 113...

  12. Molecular evidence of Burkholderia pseudomallei genotypes based on geographical distribution.

    Science.gov (United States)

    Zulkefli, Noorfatin Jihan; Mariappan, Vanitha; Vellasamy, Kumutha Malar; Chong, Chun Wie; Thong, Kwai Lin; Ponnampalavanar, Sasheela; Vadivelu, Jamuna; Teh, Cindy Shuan Ju

    2016-01-01

    Background. Central intermediary metabolism (CIM) in bacteria is defined as a set of metabolic biochemical reactions within a cell, which is essential for the cell to survive in response to environmental perturbations. The genes associated with CIM are commonly found in both pathogenic and non-pathogenic strains. As these genes are involved in vital metabolic processes of bacteria, we explored the efficiency of the genes in genotypic characterization of Burkholderia pseudomallei isolates, compared with the established pulsed-field gel electrophoresis (PFGE) and multilocus sequence typing (MLST) schemes. Methods. Nine previously sequenced B. pseudomallei isolates from Malaysia were characterized by PFGE, MLST and CIM genes. The isolates were later compared to the other 39 B. pseudomallei strains, retrieved from GenBank using both MLST and sequence analysis of CIM genes. UniFrac and hierachical clustering analyses were performed using the results generated by both MLST and sequence analysis of CIM genes. Results. Genetic relatedness of nine Malaysian B. pseudomallei isolates and the other 39 strains was investigated. The nine Malaysian isolates were subtyped into six PFGE profiles, four MLST profiles and five sequence types based on CIM genes alignment. All methods demonstrated the clonality of OB and CB as well as CMS and THE. However, PFGE showed less than 70% similarity between a pair of morphology variants, OS and OB. In contrast, OS was identical to the soil isolate, MARAN. To have a better understanding of the genetic diversity of B. pseudomallei worldwide, we further aligned the sequences of genes used in MLST and genes associated with CIM for the nine Malaysian isolates and 39 B. pseudomallei strains from NCBI database. Overall, based on the CIM genes, the strains were subtyped into 33 profiles where majority of the strains from Asian countries were clustered together. On the other hand, MLST resolved the isolates into 31 profiles which formed three clusters

  13. Genotyping of Mycobacterium leprae present on Ziehl-Neelsen-stained microscopic slides and in skin biopsy samples from leprosy patients in different geographic regions of Brazil

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    Amanda Nogueira Brum Fontes

    2012-12-01

    Full Text Available We analysed 16 variable number tandem repeats (VNTR and three single-nucleotide polymorphisms (SNP in Mycobacterium leprae present on 115 Ziehl-Neelsen (Z-N-stained slides and in 51 skin biopsy samples derived from leprosy patients from Ceará (n = 23, Pernambuco (n = 41, Rio de Janeiro (n = 22 and Rondônia (RO (n = 78. All skin biopsies yielded SNP-based genotypes, while 48 of the samples (94.1% yielded complete VNTR genotypes. We evaluated two procedures for extracting M. leprae DNA from Z-N-stained slides: the first including Chelex and the other combining proteinase and sodium dodecyl sulfate. Of the 76 samples processed using the first procedure, 30.2% were positive for 16 or 15 VNTRs, whereas of the 39 samples processed using the second procedure, 28.2% yielded genotypes defined by at least 10 VNTRs. Combined VNTR and SNP analysis revealed large variability in genotypes, but a high prevalence of SNP genotype 4 in the Northeast Region of Brazil. Our observation of two samples from RO with an identical genotype and seven groups with similar genotypes, including four derived from residents of the same state or region, suggest a tendency to form groups according to the origin of the isolates. This study demonstrates the existence of geographically related M. leprae genotypes and that Z-N-stained slides are an alternative source for M. leprae genotyping.

  14. Distribution of hepatitis C virus genotypes in volunteer blood donors from Chengdu, China.

    Science.gov (United States)

    Gong, Tianxiang; Zhao, Xin; Luo, Yijia; Hong, Ying; Li, Shuping; Fu, Xuemei

    2016-07-01

    Hepatitis C virus (HCV) is a significant pathogen of global concern. The virus is usually spread through blood contact, such as transfusion, hemodialysis and injection of illegal drugs. HCV genotypes have a geographic distribution in different areas. In this paper, we focus on the distribution of HCV genotypes from volunteer blood donors in Chengdu. The prevalence of genotypes was analyzed using phylogenetic analysis. Phylogenetic trees were constructed based on the HCV core and NS5B regions from 313 sequences. HCV sequences were classified into six subtypes, and HCV genotypes were determined with the following results: 1b in 283, 2a in 14, 3b in seven, 3a in three, 6a in five and 6u in one. Subtype 1b was the most common and accounted for approximately 90.41 % (283/313), and a virus of subtype 6u was isolated for the first time from the Chengdu area. Genotypes 4 and 5 were not detected. PMID:27101072

  15. Diversity of genotypes in CTX-M-producing Klebsiella pneumoniae isolated in different hospitals in Brazil

    OpenAIRE

    Thiago Pavoni Gomes Chagas; Ronaldo Mendes Alves; Deyse Christina Vallim; Liliane Miyuki Seki; Leila Carvalho Campos; Marise Dutra Asensi

    2011-01-01

    OBJECTIVE: The present study was undertaken to characterize CTX-M ESBL-producing Klebsiella pneumoniae collected from hospitals in different cities of Brazil. MATERIAL AND METHODS: Eighty-five K. pneumoniae strains isolated from hospitalized patients in six different hospitals of three cities of Brazil were analyzed. ESBL production was confirmed by the standard double-disk synergy test and the Etest®. The MIC50 and MIC90 for ESBL-producing isolates were determined by the Etest® method. The a...

  16. THE DOHA DEVELOPMENT AGENDA AND BRAZIL: A CLOSER LOOK INTO THE DISTRIBUTIONAL IMPACTS INSIDE AGRICULTURE

    OpenAIRE

    Ferreira Filho, Joaquim Bento de Souza; Horridge, Mark

    2006-01-01

    In this paper we extend previous results about how trade integration can affect poverty and income distribution in Brazil. To assess the impacts of a Doha Development Agenda (DDA) scenario on poverty and income distribution in Brazil, a 2 computable general equilibrium model (CGE) of Brazil was used, linked to a microsimulation (MS) model. This method was proposed by Ferreira Filho and Horridge, and guarantees consistency between both models. The model comprises 112,055 Brazilian households a...

  17. Genotyping of Leptospira directly in urine samples of cattle demonstrates a diversity of species and strains in Brazil.

    Science.gov (United States)

    Hamond, C; Pestana, C P; Medeiros, M A; Lilenbaum, W

    2016-01-01

    The aim of this study was to identify Leptospira in urine samples of cattle by direct sequencing of the secY gene. The validity of this approach was assessed using ten Leptospira strains obtained from cattle in Brazil and 77 DNA samples previously extracted from cattle urine, that were positive by PCR for the genus-specific lipL32 gene of Leptospira. Direct sequencing identified 24 (31·1%) interpretable secY sequences and these were identical to those obtained from direct DNA sequencing of the urine samples from which they were recovered. Phylogenetic analyses identified four species: L. interrogans, L. borgpetersenii, L. noguchii, and L. santarosai with the most prevalent genotypes being associated with L. borgpetersenii. While direct sequencing cannot, as yet, replace culturing of leptospires, it is a valid additional tool for epidemiological studies. An unexpected finding from this study was the genetic diversity of Leptospira infecting Brazilian cattle. PMID:26076668

  18. ISOLATION AND GENOTYPING OF Toxoplasma gondii IN SERONEGATIVE URBAN RATS AND PRESENCE OF ANTIBODIES IN COMMUNICATING DOGS IN BRAZIL

    Science.gov (United States)

    RUFFOLO, Bruno Bergamo; TOLEDO, Roberta dos Santos; MARTINS, Felippe Danyel Cardoso; BUGNI, Felipe Monteiro; da COSTA, Letícia; MARANA, Elizabete Regina Marangoni; NAVARRO, Italmar Teodorico; GARCIA, João Luis; SU, Chunlei; FREIRE, Roberta Lemos

    2016-01-01

    The role of rodents in the epidemiology of toxoplasmosis was investigated in Londrina, Paraná State, Brazil. One hundred and eighty-one Rattus rattus and one Mus musculus were caught in 37 places. Blood and tissues were collected and submitted to the indirect fluorescence antibody test (IFAT) and the bioassay. Serum samples from 61 contacting dogs were also collected. Sixteen rats (8.8%) were positive for Toxoplasma gondii, but just two of them were positive by serology and bioassay test. Antibodies were found in nine (4.9%) rats. Tissues of nine rats bioassayed were positive and four isolates were obtained. Restriction fragment length polymorphism (RFLP) analysis was performed using 12 markers (SAG1, SAG2, SAG2-alt, C22-8, C29-2, L358, PK1, BTUB, GRA6, SAG3, Apico, CS3). Genotyping revealed that the four strains isolated from this study have been isolated before in cats and chickens from Brazil. None of the isolates was identified like clonal archetypal T-types I, II, and III. The rats presented lower serologic Toxoplasma gondii prevalence (8.8%) compared to contacting dogs (70.5%). PMID:27074322

  19. Evaluation of Brucella abortus S19 vaccines commercialized in Brazil: immunogenicity, residual virulence and MLVA15 genotyping.

    Science.gov (United States)

    Miranda, Karina Leite; Poester, Fernando Padilla; Minharro, Silvia; Dorneles, Elaine Maria Seles; Stynen, Ana Paula Reinato; Lage, Andrey Pereira

    2013-06-24

    Live attenuated Brucella abortus S19 is the most effective vaccine against brucellosis in cattle. The assessment of the immunological parameters is essential to guarantee the biological quality of live anti-bacteria vaccines. The evaluation of genetic stability of live bacterial vaccines is also important in quality control. The aims of the present study were to compare (i) the immunogenicity and residual virulence, and (ii) the genotypic profile (MLVA15) of the eight S19 vaccines commercialized in Brazil to the USDA S19 reference strain. Two batches of each of the eight S19 commercial vaccines used in Brazil (A-H) were tested. They were submitted to the potency and residual virulence in vivo tests recommended by OIE and typed by the multiple-locus variable-number tandem repeat (VNTR) analysis (MLVA) described for Brucella spp. Our results demonstrated that all S19 vaccines commercialized in Brazil would be approved by Brazilian and OIE recommendations for potency and residual virulence. Furthermore, the S19 vaccine is genetically very homogeneous, as all but two batches (from the same manufacturer) tested showed identical MLVA15 profile. The two batches with different profiles presented six repeat units in locus Bruce07, instead of the five found in all other strains, including the USDA S19 reference strain. Although presenting a slightly different profile, this vaccine was also protective, as demonstrated by the immunogenicity and residual virulence assays performed. Therefore, the commercial Brazilian S19 vaccines were in accordance to Brazilian and international standards for immunogenicity and residual virulence tests. Moreover, our results also show that MLVA could be a useful inclusion to the list of in vitro tests required by the official control authorities to be applied to the commercial S19 vaccines, as an efficient assay to guarantee the quality and stability of the vaccine strains. PMID:23664986

  20. Distribution of Cs137 in soils from Bahia state, Brazil

    International Nuclear Information System (INIS)

    A high-resolution gamma-ray spectrometry method was developed in order to study the distribution of Cs137 in topsoils of State of Bahia (Brazil). The results has shown concentrations varying between 0.6 and 6.0 nCi/m2. Correlation of the Cs137 concentration with environmental and ohysico-chemical parameters has shown a tendency for greatest accumulation in soils with regions of greatest precipitation rates: 2.0 nCi/m2, on the average, for regions with 700mm to 1,000 mm/year and 2.8 nCi/m2, on the average, in regions with 1,700 mm to 2,000 mm/year. On the other hand, an anti-correlation between this radionuclide and both calcium and clay content, for soils of similar type and under similar climatic conditions is seen. (C.D.G.)

  1. Temporal distribution of tuberculosis in the State of Amazonas, Brazil

    Directory of Open Access Journals (Sweden)

    Marlucia da Silva Garrido

    2015-06-01

    Full Text Available Tuberculosis (TB is one of the infectious diseases that contributes most to the morbidity and mortality of millions of people worldwide. Brazil is one of 22 countries that accounts for 80% of the tuberculosis global burden. The highest incidence rates in Brazil occur in the States of Amazonas and Rio de Janeiro. The aim of this study was to describe the temporal distribution of TB in the State of Amazonas. Between 2001 and 2011, 28,198 cases of tuberculosis were reported in Amazonas, distributed among 62 municipalities, with the capital Manaus reporting the highest (68.7% concentration of cases. Tuberculosis was more prevalent among males (59.3% aged 15 to 34 years old (45.5%, whose race/color was predominantly pardo (64.7% and who had pulmonary TB (84.3%. During this period, 81 cases of multidrug-resistant TB were registered, of which the highest concentration was reported from 2008 onward (p = 0.002. The municipalities with the largest numbers of indigenous individuals affected were São Gabriel da Cachoeira (93%, Itamarati (78.1%, and Santa Isabel do Rio Negro (70.1%. The future outlook for this region includes strengthening the TB control at the primary care level, by expanding diagnostic capabilities, access to treatment, research projects developed in collaboration with the Dr. Heitor Vieira Dourado Tropical Medicine Foundation .;Fundação de Medicina Tropical Dr. Heitor Vieira Dourado (FMT-HVD.; and financing institutions, such as the project for the expansion of the Clinical Research Center and the creation of a hospital ward for individuals with transmissible respiratory diseases, including TB.

  2. The Prevalence and Genotype Distribution of Human Papillomavirus in the Genital Tract of Males in Iran

    Directory of Open Access Journals (Sweden)

    Salehi-Vaziri

    2015-12-01

    Full Text Available Background Human papillomavirus (HPV is the most common viral sexually-transmitted infection. Despite HPV infection is associated with several malignant disorders including penile and anal cancers, little is known about the epidemiology of HPV infection in males, particularly in developing countries. Objectives The aim of this study was to determine the prevalence of HPV infection and its genotype distribution among Iranian males. Patients and Methods Between March 2009 and April 2014, a total number of 483 males, referred to Iran University of Medical Sciences-affiliated sexually transmitted infections (STI clinics, were enrolled in this study. Following DNA extraction, HPV detection and genotyping were performed using INNO-LiPA HPV Genotyping Extra assay. To analyze the association of HPV infection and age, the logistic regression was employed. Results No statistical association between HPV infection and age was observed (P = 0.469. Furthermore, there was no statistically significant correlation between HR HPV infection and age (P = 0.330. Conclusions In this investigation, the prevalence of HPV infection was relatively substantial. Totally, 17 different HPV genotypes were detected and the most frequently detected genotypes were HPV6, HPV11, HPV16, HPV18 and HPV52, respectively. The data from this study is essential for planning future public health strategies including HPV vaccination programs.

  3. In vitro Culture of a Novel Genotype of Ehrlichia sp from Brazil

    Czech Academy of Sciences Publication Activity Database

    Zweygarth, E.; Schol, H.; Lis, K.; Cabezas Cruz, Alejandro; Thiel, C.; Silaghi, C.; Ribeiro, M.F.B.; Passos, L.M.F.

    2013-01-01

    Roč. 60, NOV 2013 (2013), s. 86-92. ISSN 1865-1674 Grant ostatní: EU(XE) FP7-PEOPLE-ITN No.238511 Institutional support: RVO:60077344 Keywords : Ehrlichia * Rhipicephalus (Boophilus) microplus * in vitro culture * tick cell * DH82 * endothelial cell * cattle * 16S rRNA * Brazil Subject RIV: EB - Genetics ; Molecular Biology Impact factor: 3.116, year: 2013

  4. Tsallis statistics in the income distribution of Brazil

    Science.gov (United States)

    Soares, Abner D.; Moura, Newton J., Jr.; Ribeiro, Marcelo B.

    2016-07-01

    This paper discusses the empirical evidence of Tsallis statistical functions in the personal income distribution of Brazil. Yearly samples from 1978 to 2014 were linearized by the q-logarithm and straight lines were fitted to the entire range of the income data in all samples, producing a two-parameters-only single function representation of the whole distribution in every year. The results showed that the time evolution of the parameters is periodic and plotting one in terms of the other reveals a cycle mostly clockwise. It was also found that the empirical data oscillate periodically around the fitted straight lines with the amplitude growing as the income values increase. Since the entire income data range can be fitted by a single function, this raises questions on previous results claiming that the income distribution is constituted by a well defined two-classes-base income structure, since such a division in two very distinct income classes might not be an intrinsic property of societies, but a consequence of an a priori fitting-choice procedure that may leave aside possibly important income dynamics at the intermediate levels.

  5. Helicobacter pylori vacA and cagA genotypes in patients from northeastern Brazil with upper gastrointestinal diseases

    Directory of Open Access Journals (Sweden)

    Meyssa Quezado de Figueiredo Cavalcante

    2012-06-01

    Full Text Available Helicobacter pylori causes chronic gastric inflammation and significantly increases the risk of duodenal and gastric ulcer disease and distal gastric carcinoma. In this study, we evaluated the Helicobacter pylori vacA and cagA genotypes in patients from a Brazilian region where there is a high prevalence of gastric cancer. Polymerase chain reaction (PCR was used to investigate vacA mosaicism and cagA status in the gastric mucosa of 134 H. pylori-positive patients, including 76 with gastritis: 28 with peptic ulcer disease and 30 with gastric cancer. The s1m1 variant was the predominant vacA genotype observed, whereas the s1 allele was more frequently observed in patients with more severe diseases associated with H. pylori infection [p = 0.03, odds ratio (OR = 5.72, 95% confidence interval (CI = 1.15-38.60]. Furthermore, all of the s1 alleles were s1b. Mixed vacA m1/m2 strains were found more frequently in patients with gastric cancer and a cagA-positive status was significantly associated with gastric cancer (p = 0.016, OR = 10.36, 95% CI = 1.35-217.31. Patients with gastric cancer (21/21, 100%, p = 0.006 or peptic ulcers (20/21, 95%, p = 0.02 were more frequently colonised by more virulent H. pylori strains compared to gastritis patients (41/61, 67.2%. In conclusion, in the northeastern of Brazil, which is one of the regions with the highest prevalence of gastric cancer in the country, infection with the most virulent H. pylori strains, carrying the cagA gene and s1m1 vacA alleles, predominates and is correlated with more severe H. pylori-associated diseases.

  6. Prevalence, risk factors and genotypes of hepatitis B infection among HIV-infected patients in the State of MS, Central Brazil

    Directory of Open Access Journals (Sweden)

    Solange Zacalusni Freitas

    2014-09-01

    Full Text Available Objectives: A cross-sectional study on prevalence of HBV and HDV infection, risk factors and genotype distribution of HBV infection was conducted among 848 HIV-infected patients in Mato Grosso do Sul, Central Brazil. Methods: Serum samples of 848 participants were tested for hepatitis B surface antigen (HBsAg, hepatitis B core antibody (anti-HBc and hepatitis surface antibody (anti-HBs. HBsAg positive samples were tested for anti-HBc IgM, HBeAg, anti-HBe, anti-HCV, and total anti-HDV. HBsAg and anti-HBc positive were subjected to DNA extraction. Viral DNA was amplified by semi-nested PCR for the regions pre-S/S and then purified and genotyped/subgenotyped by direct sequencing. Student's t-test, chi-square test and Fisher's exact test were used to compare variables and to evaluate association between HBV positivity (defined as anti-HBc and/or HBsAg positivity and risk factors. Results: Among the 848 HIV infected patients investigated 222 had serological markers of HBV infection. The prevalence rate of HIV-HBV coinfection was 2.5% (21/848; 95% CI: 1.4–3.5%; 484 (57.1% patients were susceptible for HBV infection. There were no cases of anti-HDV positive and only one (0.1% anti-HCV-positive case among the HIV-HBV coinfected patients. Male gender, increasing age, family history of hepatitis, use of illicit drug, and homosexual activity were independent factors associated with HBV exposure. The phylogenetic analysis based on the S gene region revealed the presence of genotypes D (76.9%, F (15.4% and A (7.7% in the study sample. Conclusion: This study demonstrates the low prevalence of HIV-HBV infection and also highlights the need for early vaccination against HBV as well as testing for HBV, HCV and HDV in all HIV-infected individuals.

  7. Dose distribution behaviour of the IPEN-CNEN/Brazil workers

    International Nuclear Information System (INIS)

    The Instituto de Pesquisas Energeticas e Nucleares, IPEN, in Brazil has a major role in several fields of the nuclear activity, such as radiation and radioisotope applications, nuclear research reactor, testing materials and fuel cycle and radiological protection and dosimetry. The goal of this paper is to present the dose distribution behaviour of occupational radiation exposures of the monitored workers at IPEN during the years 2000 to 2007. This study is based on the dose registry data, obtained by Thermoluminescent Dosimetry to the whole body and acquired by Thermoluminescent Dosimetry Laboratory of the IPEN. The TLDs are usually positioned on the trunk between the waist and shoulder that is the part of the body with the highest exposure rate. In this study the average of 740 monitored workers over the years, meaning 100% of the participants, was considered. The results show that the values of effective dose obtained are in reasonable agreement with national regulations. The average annual effective dose in the period considered, was 3.52±0.48 mSv with a maximum value of 23.31 mSv in 2001. The average and maximum values of the effective doses represent approximately 17.6% and 116.6% of the annual effective radiation dose limit, according to the recommendation of the International Commission on Radiological Protection. The overall distribution allowed the comparison of all doses reported and did not exceed the effective dose of 20 mSv per year, average over defined 5 year period. In this time period the effective dose did not also exceed 50 mSv in any single year. (author)

  8. Prevalence of hepatitis C virus among users attending a voluntary testing centre in Rio Grande, southern Brazil: predictive factors and hepatitis C virus genotypes.

    Science.gov (United States)

    Germano, F N; dos Santos, C A; Honscha, G; Strasburg, A; Gabbi, B; Mendoza-Sassi, R A; Soares, E A; Seuánez, H N; Soares, M A; Martínez, A M B

    2010-07-01

    We estimated the prevalence of hepatitis C (HCV) infection and associated risk factors in 750 individuals attending the Voluntary Counseling and Testing Center of Rio Grande (VCT/RG), in Southern Brazil, and identified viral genotypes. Demographic data and risk factors for HCV transmission were also collected and analysed. Anti-HCV antibody-positive individuals were tested for HCV-RNA and genotyped by sequencing the 5' untranslated region of the viral genome. Prevalence estimates of anti-HCV and HCV-RNA were 6% and 5.5%, respectively. We identified genotypes 1 (67%), 2 (2%) and 3 (31%); the latter was more prevalent than in other regions of Brazil. Anti-HCV prevalence in VCT/RG users was similar to previous reports. Age, previous blood transfusion, sexual orientation and injecting drug use were independent predictors of HCV infection. The presence of multiple risk factors was also associated with a higher risk for HCV infection. HCV genotype was not associated with any variable analysed in this study. PMID:20852195

  9. Distribution of Cytomegalovirus Genotypes among Neonates Born to Infected Mothers in Islamabad, Pakistan

    Science.gov (United States)

    Mujtaba, Ghulam; Khurshid, Adnan; Sharif, Salmaan; Alam, Muhammad Masroor; Aamir, Uzma Bashir; Shaukat, Shahzad; Angez, Mehar; Rana, Muhammad Suleman; Umair, Massab; Shah, Aamer Ali; Zaidi, Syed Sohail Zahoor

    2016-01-01

    infection during pregnancy is a major cause of congenital CMV infection with comparable distribution of all three genotypes: gB, gN and gH in symptomatic and asymptomatic neonates. Our findings emphasize to conduct a comprehensive large scale survey and introduction of country wide routine screening at maternity clinics for early diagnosis of CMV to reduce its associated devastating outcomes. PMID:27367049

  10. Indoor radon distribution in metropolitan region of Belo Horizonte, Brazil

    International Nuclear Information System (INIS)

    Human beings are exposed to ionizing radiation from many natural sources. Radon and its progeny have been recognized as the most important contributors to the natural radioactivity dose, accounting for about half of all human exposure to ionizing radiation. Radon (222Rn) is a α-radioactive noble gas derived from the natural series of uranium (238U), which occurs in a wide concentration range in all geological materials, especially, in rocks, soils and waters. By diffusion and convection, radon migrates from the rocks and soils to atmosphere and through fissures, pipes and holes it may enter the dwellings and other buildings. Another important radon source in dwellings is its emanation from the construction material. The radon progeny concentration in dwellings has been receiving considerable global attention due to its potential effect in causing lung cancer if it deposited in upper respiratory tract when inhaled. This paper presents radon concentration distribution in dwellings in Metropolitan Region of Belo Horizonte - RMBH. The effective dose estimate is also presented for the RMBH inhabitants. The geological settings of the area are Archean rocks of Granitic Gnaissic Complex and of metasediments sequences of the great Precambrian unit of the Iron Quadrangle of Minas Gerais, Brazil. Radon concentration measurements were carried out with continuous detector AlphaGUARD PQ200PRO (Genitron), in passive mode and with passive detectors E-PERMR Eletret Ion Chamber-EIC. The radon progeny concentration was carried out with a solid state alpha spectroscope, the DOSEman PRO (Sarad). It was found an indoor radon concentration varying in a large range from 18.5 to 2671.4 Bq/m-3, with an average value of 148.0 Bqm-3 and geometric mean equal to 128.2 Bqm-3. The variable results are due mainly to region geological factors and building material composition of dwellings. The equilibrium factor between radon and its progeny were determined in dwellings, as 0.3 in average. (author)

  11. Molecular characterization, distribution, and dynamics of hepatitis C virus genotypes in blood donors in Colombia.

    Science.gov (United States)

    Mora, Mónica Viviana Alvarado; Romano, Camila Malta; Gomes-Gouvêa, Michele Soares; Gutiérrez, Maria Fernanda; Carrilho, Flair José; Pinho, João Renato Rebello

    2010-11-01

    Hepatitis C virus (HCV) is a frequent cause of acute and chronic hepatitis and a leading cause for cirrhosis of the liver and hepatocellular carcinoma. HCV is classified in six major genotypes and more than 70 subtypes. In Colombian blood banks, serum samples were tested for anti-HCV antibodies using a third-generation ELISA. The aim of this study was to characterize the viral sequences in plasma of 184 volunteer blood donors who attended the "Banco Nacional de Sangre de la Cruz Roja Colombiana," Bogotá, Colombia. Three different HCV genomic regions were amplified by nested PCR. The first of these was a segment of 180 bp of the 5'UTR region to confirm the previous diagnosis by ELISA. From those that were positive to the 5'UTR region, two further segments were amplified for genotyping and subtyping by phylogenetic analysis: a segment of 380 bp from the NS5B region; and a segment of 391 bp from the E1 region. The distribution of HCV subtypes was: 1b (82.8%), 1a (5.7%), 2a (5.7%), 2b (2.8%), and 3a (2.8%). By applying Bayesian Markov chain Monte Carlo simulation, it was estimated that HCV-1b was introduced into Bogotá around 1950. Also, this subtype spread at an exponential rate between about 1970 to about 1990, after which transmission of HCV was reduced by anti-HCV testing of this population. Among Colombian blood donors, HCV genotype 1b is the most frequent genotype, especially in large urban conglomerates such as Bogotá, as is the case in other South American countries. PMID:20872715

  12. Hepatitis C virus (HCV) genotypes in 373 Italian children with HCV infection: changing distribution and correlation with clinical features and outcome

    OpenAIRE

    Bortolotti, F; Resti, M; Marcellini, M; Giacchino, R.; Verucchi, G.; Nebbia, G; Zancan, L; Marazzi, M G; Barbera, C; Maccabruni, A; Zuin, G.; Maggiore, G; Balli, F.; Vajro, P; Lepore, L

    2005-01-01

    Background and aim: Little is known of hepatitis C virus (HCV) genotypes in HCV infected children. This retrospective, multicentre study investigated genotype distribution and correlation with clinical features and outcome in a large series of Italian children.

  13. A new species of Decimiana Uvarov (Insecta, Mantodea, Acanthopidae from Brazil, with remarks on the distribution of Decimiana bolivari (Chopard

    Directory of Open Access Journals (Sweden)

    Eliomar Menezes

    2012-11-01

    Full Text Available Decimiana Uvarov is a Neotropical genus of Mantodea with five South American species, three of them known from Brazil: Decimiana tessellata (Charpentier; Decimiana clavata Ippolito & Lombardo; and Decimiana bolivari (Chopard. A fourth species from Brazil is described and new records of Decimiana bolivari (Chopard from Brazil are presented and its distribution discussed.

  14. Case Study: Tax reform, income distribution and poverty in Brazil: an applied general equilibrium analysis

    OpenAIRE

    Joaquim B de Souza Ferreira Filho; Carliton V dos Santos; Sandra M do Prado Lima

    2010-01-01

    This case study considers two frequently advocated approaches to reducing indirect taxation in Brazil: reduction in taxes on food; reduction in taxes on intermediate inputs to agriculture. To asses the effects of both on income distribution poverty levels, a bottom-up general equilibrium model of Brazil (TERM-BR) is linked to a microsimulation model. It is shown that one of the favoured policies is more poverty reducing, the other more income inequality reducing. Perhaps even more importantly...

  15. Essential Oil Variation from Twenty Two Genotypes of Citrus in Brazil-Chemometric Approach and Repellency Against Diaphorina citri Kuwayama.

    Science.gov (United States)

    Andrade, Moacir Dos Santos; Ribeiro, Leandro do Prado; Borgoni, Paulo Cesar; Silva, Maria Fátima das Graças Fernandes da; Forim, Moacir Rossi; Fernandes, João Batista; Vieira, Paulo Cezar; Vendramin, José Djair; Machado, Marcos Antônio

    2016-01-01

    The chemical composition of volatile oils from 22 genotypes of Citrus and related genera was poorly differentiated, but chemometric techniques have clarified the relationships between the 22 genotypes, and allowed us to understand their resistance to D. citri. The most convincing similarities include the synthesis of (Z)-β-ocimene and (E)-caryophyllene for all 11 genotypes of group A. Genotypes of group B are not uniformly characterized by essential oil compounds. When stimulated with odor sources of 22 genotypes in a Y-tube olfactometer D. citri preferentially entered the arm containing the volatile oils of Murraya paniculata, confirming orange jasmine as its best host. C. reticulata × C. sinensis was the least preferred genotype, and is characterized by the presence of phytol, (Z)-β-ocimene, and β-elemene, which were not found in the most preferred genotype. We speculate that these three compounds may act as a repellent, making these oils less attractive to D. citri. PMID:27338332

  16. Hepatitis C virus prevalence and genotype distribution in Pakistan: Comprehensive review of recent data

    Science.gov (United States)

    Umer, Muhammad; Iqbal, Mazhar

    2016-01-01

    Hepatitis C virus (HCV) is endemic in Pakistan and its burden is expected to increase in coming decades owing mainly to widespread use of unsafe medical procedures. The prevalence of HCV in Pakistan has previously been reviewed. However, the literature search conducted here revealed that at least 86 relevant studies have been produced since the publication of these systematic reviews. A revised updated analysis was therefore needed in order to integrate the fresh data. A systematic review of data published between 2010 and 2015 showed that HCV seroprevalence among the general adult Pakistani population is 6.8%, while active HCV infection was found in approximately 6% of the population. Studies included in this review have also shown extremely high HCV prevalence in rural and underdeveloped peri-urban areas (up to 25%), highlighting the need for an increased focus on this previously neglected socioeconomic stratum of the population. While a 2.45% seroprevalence among blood donors demands immediate measures to curtail the risk of transfusion transmitted HCV, a very high prevalence in patients attending hospitals with various non-liver disease related complaints (up to 30%) suggests a rise in the incidence of nosocomial HCV spread. HCV genotype 3a continues to be the most prevalent subtype infecting people in Pakistan (61.3%). However, recent years have witnessed an increase in the frequency of subtype 2a in certain geographical sub-regions within Pakistan. In Khyber Pakhtunkhwa and Sindh provinces, 2a was the second most prevalent genotype (17.3% and 11.3% respectively). While the changing frequency distribution of various genotypes demands an increased emphasis on research for novel therapeutic regimens, evidence of high nosocomial transmission calls for immediate measures aimed at ensuring safe medical practices. PMID:26819533

  17. Potential Geographic Distribution of Hantavirus Reservoirs in Brazil

    OpenAIRE

    de Oliveira, Stefan Vilges; Escobar, Luis E.; Peterson, A. Townsend; Gurgel-Gonçalves, Rodrigo

    2013-01-01

    Hantavirus cardiopulmonary syndrome is an emerging zoonosis in Brazil. Human infections occur via inhalation of aerosolized viral particles from excreta of infected wild rodents. Necromys lasiurus and Oligoryzomys nigripes appear to be the main reservoirs of hantavirus in the Atlantic Forest and Cerrado biomes. We estimated and compared ecological niches of the two rodent species, and analyzed environmental factors influencing their occurrence, to understand the geography of hantavirus transm...

  18. Distribution of forensic marker allelic frequencies in Pernambuco, Northestern Brazil.

    Science.gov (United States)

    Santos, S M; Souza, C A; Rabelo, K C N; Souza, P R E; Moura, R R; Oliveira, T C; Crovella, S

    2015-01-01

    Pernambuco is one of the 27 federal units of Brazil, ranking seventh in the number of inhabitants. We examined the allele frequencies of 13 short tandem repeat loci (CFS1PO, D3S1358, D5S818, D7S820, D8S1179, D13S317, D16S539, D18S51, D21S11, FGA, TH01, vWA, and TPOX), the minimum recommended by the Federal Bureau of Investigation and commonly used in forensic genetics laboratories in Brazil, in a sample of 609 unrelated individuals from all geographic regions of Pernambuco. The allele frequencies ranged from 5 to 47.2%. No significant differences for any loci analyzed were observed compared with other publications in other various regions of Brazil. Most of the markers observed were in Hardy-Weinberg equilibrium. The occurrence of the allele 47.2 (locus FGA) and alleles 35.1 and 39 (locus D21S11), also described in a single study of the Brazilian population, was observed. The other forensic parameters analyzed (matching probability, power of discrimination, polymorphic information content, paternity exclusion, complement factor I, observed heterozygosity, expected heterozygosity) indicated that the studied markers are very informative for human forensic identification purposes in the Pernambuco population. PMID:25966202

  19. New Toxoplasma gondii genotypes isolated from free-range chickens from the Fernando de Noronha, Brazil: unexpected findings

    Science.gov (United States)

    Worldwide comparison of Toxoplasma gondii isolates from free range chickens has indicated that T. gondii isolates from Brazil are phenotypically and genetically different than isolates from other countries; most strains from Brazil are pathogenic to mice, there is great genetic variability, most iso...

  20. Evidence for the Gompertz Curve in the Income Distribution of Brazil 1978-2005

    OpenAIRE

    Moura Jr., Newton J.; Ribeiro, Marcelo B.

    2008-01-01

    This work presents an empirical study of the evolution of the personal income distribution in Brazil. Yearly samples available from 1978 to 2005 were studied and evidence was found that the complementary cumulative distribution of personal income for 99% of the economically less favorable population is well represented by a Gompertz curve of the form $G(x)=\\exp [\\exp (A-Bx)]$, where $x$ is the normalized individual income. The complementary cumulative distribution of the remaining 1% richest ...

  1. Geographic distribution of phlebotomine sandfly species (Diptera: Psychodidae in Central-West Brazil

    Directory of Open Access Journals (Sweden)

    Paulo Silva de Almeida

    2015-06-01

    Full Text Available This study updates the geographic distributions of phlebotomine species in Central-West Brazil and analyses the climatic factors associated with their occurrence. The data were obtained from the entomology services of the state departments of health in Central-West Brazil, scientific collections and a literature review of articles from 1962-2014. Ecological niche models were produced for sandfly species with more than 20 occurrences using the Maxent algorithm and eight climate variables. In all, 2,803 phlebotomine records for 127 species were analysed. Nyssomyia whitmani, Evandromyia lenti and Lutzomyia longipalpis were the species with the greatest number of records and were present in all the biomes in Central-West Brazil. The models, which were produced for 34 species, indicated that the Cerrado areas in the central and western regions of Central-West Brazil were climatically more suitable to sandflies. The variables with the greatest influence on the models were the temperature in the coldest months and the temperature seasonality. The results show that phlebotomine species in Central-West Brazil have different geographical distribution patterns and that climate conditions in essentially the entire region favour the occurrence of at least one Leishmania vector species, highlighting the need to maintain or intensify vector control and surveillance strategies.

  2. Distribution of nuclear medicine service in Brazil; Distribuicao do servico de medicina nuclear no Brasil

    Energy Technology Data Exchange (ETDEWEB)

    Silva, Ana Carolina Costa da; Duarte, Alessandro; Santos, Bianca Maciel dos [Faculdade Metodo de Sao Paulo (FAMESP), Sao Paulo, SP (Brazil)

    2011-10-26

    The Brazil does not posses a good distribution of nuclear medicine service por all his territory. This paper shows the difference among country regions as far the number of clinics of nuclear medicine as is concerning, and also doctors licensed in the area and radioprotection supervisors, both licensed by the Brazilian Nuclear Energy Commission (CNEN)

  3. Statistical distribution models for migratory fish in Jacuí basin, South Brazil

    OpenAIRE

    Thaís P. Alves; Nelson F. Fontoura

    2009-01-01

    The aim of the present study was to identify the distribution patterns of migratory fishes in the Jacuí river basin (Rio Grande do Sul, South Brazil), proposing a statistical model of presumed distribution based on geomorphologic environmental data. Through maps of occurrence probability, we hope to contribute to decisions regarding basin environmental management. The analyzed species were: Salminus brasiliensis (dourado), Leporinus obtusidens (piava), Prochilodus lineatus (grumatã) and Pimel...

  4. FTO Genotype and 2-Year Change in Body Composition and Fat Distribution in Response to Weight-Loss Diets

    OpenAIRE

    Zhang, Xiaomin; Qi, Qibin; Zhang, Cuilin; Hu, Frank B.; Sacks, Frank M.; Qi, Lu

    2012-01-01

    Recent evidence suggests that the fat mass and obesity-associated gene (FTO) genotype may interact with dietary intakes in relation to adiposity. We tested the effect of FTO variant on weight loss in response to 2-year diet interventions. FTO rs1558902 was genotyped in 742 obese adults who were randomly assigned to one of four diets differing in the proportions of fat, protein, and carbohydrate. Body composition and fat distribution were measured by dual-energy x-ray absorptiometry and comput...

  5. New records, distribution and status of six seabird species in Brazil

    Directory of Open Access Journals (Sweden)

    Rafael Antunes Dias

    2010-12-01

    Full Text Available Distribution records of poorly-known species are currently the most explored theme in the Brazilian seabird literature. If properly evaluated, this kind of information can improve our knowledge on distribution, migration and status of occurrence of these species. In this note we present new records for six species of poorly-known seabirds in the Brazilian coast, reviewing distribution records and defining their status of occurrence in the country. We consider Chionis albus (Gmelin, 1789 a pseudo-vagrant in Brazil and define its status as a scarce seasonal visitor from southern South America. We present the first records of Leucophaeus atricilla (Linnaeus, 1758 for Trindade Island, and of Leucophaeus pipixcan (Wagler, 1831 for the state of Rio Grande do Sul, and determined that the former is a vagrant in eastern Brazil and the latter a vagrant across the country. Anous stolidus (Linnaeus, 1758 is a vagrant in southernmost Brazil. We were unable to determine if records of Chlidonias niger (Linnaeus, 1758 for Brazil and southern South America refer to vagrancy or pseudo-vagrancy. Additionally, we verified the occurrence of breeding individuals of Anous minutus Boie, 1844 on Martin Vaz Island and confirmed that there is no evidence of breeding on neighboring Trindade Island.

  6. Distribution of hepatitis C virus genotypes among injecting drug users in Lebanon

    Directory of Open Access Journals (Sweden)

    Shamra Sarah

    2010-05-01

    Full Text Available Abstract Background The aim of this study is to determine the prevalence of anti-HCV among injecting drug users (IDUs in Lebanon, to establish the current prevalence of HCV genotypes in this population and to determine whether demographic characteristics and behavioral variables differ between participants who were HCV-RNA positive and those who were HCV-RNA negative or between the different genotypes. Participants were recruited using respondent-driven sampling method. The blood samples were collected as dried blood spots and then eluted to be tested for HCV, HBV and HIV by ELISA. Anti-HCV positive samples were subjected to RNA extraction followed by qualitative detection and genotyping. Results Among 106 IDUs, 56 (52.8% were anti-HCV-positive. The two groups did not differ in terms of age, marital status, and nationality. As for the behavioral variable, there was a trend of increased risky behaviors among the HCV-RNA positive group as compared to the HCV-RNA negative group but none of the variables reached statistical significance. Half (50% of the 56 anti-HCV-positive were HCV-RNA positive. Genotype 3 was the predominant one (57.1% followed by genotype 1 (21% and genotype 4 (18%. Conclusions The predominance of genotype 3 seems to be the predominant genotype among IDUs in Lebanon, a situation similar to that among IDUs in Western Europe. This study provides a base-line against possible future radical epidemiological variant that might occur in IDUs.

  7. Temporal changes in HCV genotype distribution in three different high risk populations in San Francisco, California

    Directory of Open Access Journals (Sweden)

    Evans Jennifer

    2011-08-01

    Full Text Available Abstract Background Hepatitis C virus (HCV genotype (GT has become an important measure in the diagnosis and monitoring of HCV infection treatment. In the United States (U.S. HCV GT 1 is reported as the most common infecting GT among chronically infected patients. In Europe, however, recent studies have suggested that the epidemiology of HCV GTs is changing. Methods We assessed HCV GT distribution in 460 patients from three HCV-infected high risk populations in San Francisco, and examined patterns by birth cohort to assess temporal trends. Multiple logistic regression was used to assess factors independently associated with GT 1 infection compared to other GTs (2, 3, and 4. Results Overall, GT 1 was predominant (72.4%, however younger injection drug users (IDU had a lower proportion of GT 1 infections (54.7% compared to older IDU and HIV-infected patients (80.5% and 76.6%, respectively. Analysis by birth cohort showed increasing proportions of non-GT 1 infections associated with year of birth: birth before 1970 was independently associated with higher adjusted odds of GT 1: AOR 2.03 (95% CI: 1.23, 3.34. African-Americans as compared to whites also had higher adjusted odds of GT 1 infection (AOR: 3.37; 95% CI: 1.89, 5.99. Conclusions Although, HCV GT 1 remains the most prevalent GT, especially among older groups, changes in GT distribution could have significant implications for how HCV might be controlled on a population level and treated on an individual level.

  8. Distribution of HPV genotypes in cervical intraepithelial lesions and cervical cancer in Tanzanian women

    Directory of Open Access Journals (Sweden)

    Vidal Adriana C

    2011-11-01

    Full Text Available Abstract Background Infection with human papillomavirus (HPV is associated with uterine cervical intraepithelial neoplasia (CIN and invasive cancers (ICC. Approximately 80% of ICC cases are diagnosed in under-developed countries. Vaccine development relies on knowledge of HPV genotypes characteristic of LSIL, HSIL and cancer; however, these genotypes remain poorly characterized in many African countries. To contribute to the characterization of HPV genotypes in Northeastern Tanzania, we recruited 215 women from the Reproductive Health Clinic at Kilimanjaro Christian Medical Centre. Cervical scrapes and biopsies were obtained for cytology and HPV DNA detection. Results 79 out of 215 (36.7% enrolled participants tested positive for HPV DNA, with a large proportion being multiple infections (74%. The prevalence of HPV infection increased with lesion grade (14% in controls, 67% in CIN1 cases and 88% in CIN2-3. Among ICC cases, 89% had detectable HPV. Overall, 31 HPV genotypes were detected; the three most common HPV genotypes among ICC were HPV16, 35 and 45. In addition to these genotypes, co-infection with HPV18, 31, 33, 52, 58, 68 and 82 was found in 91% of ICC. Among women with CIN2-3, HPV53, 58 and 84/83 were the most common. HPV35, 45, 53/58/59 were the most common among CIN1 cases. Conclusions In women with no evidence of cytological abnormalities, the most prevalent genotypes were HPV58 with HPV16, 35, 52, 66 and 73 occurring equally. Although numerical constraints limit inference, findings that 91% of ICC harbor only a small number of HPV genotypes suggests that prevention efforts including vaccine development or adjuvant screening should focus on these genotypes.

  9. Regulatory actions to expand the offer of distributed generation from renewable energy sources in Brazil

    International Nuclear Information System (INIS)

    The composition of the Brazilian electric energy matrix has undergone transformations in recent years. However, it has still maintained significant participation of renewable energy sources, in particular hydropower plants of various magnitudes. Reasons for the growth of other renewable sources of energy, such as wind and solar, include the fact that the remaining hydropower capacity is mainly located in the Amazon, which is far from centers of consumption, the necessity of diversifying the energy mix and reducing dependence on hydrologic regimes, the increase in environmental restrictions, the increase of civil construction and land costs.Wind power generation has grown most significantly in Brazil. Positive results in the latest energy auctions show that wind power generation has reached competitive pricing. Solar energy is still incipient in Brazil, despite its high potential for conversion into electric energy. This energy source in the Brazilian electric energy matrix mainly involves solar centrals and distributed generation. Biomass thermal plants, mainly the ones that use bagasse of sugar cane, also have an important role in renewable generation in Brazil.This paper aims to present an overview of the present situation and discuss the actions and the regulations to expand the offer of renewable distributed generation in Brazil, mainly from wind power, solar and biomass energy sources. (full text)

  10. Genotype distribution of human papillomavirus (HPV) in histological sections of cervical intraepithelial neoplasia and invasive cervical carcinoma in Madrid, Spain

    International Nuclear Information System (INIS)

    Human Papillomavirus (HPV) genotype distribution and co-infection occurrence was studied in cervical specimens from the city of Madrid (Spain), as a contribution to the knowledge of Human Papillomavirus genotype distribution and prevalence of carcinogenic HPV types in cervical lesions in Spain. A total of 533 abnormal specimens, from the Hospital General Universitario “Gregorio Marañón” of Madrid, were studied. These included 19 benign lesions, 349 cervical intraepithelial neoplasias 1 (CIN1), 158 CIN2-3 and 7 invasive cervical carcinomas (ICC). HPV genotyping was performed using PCR and tube array hybridization. We detected 20 different HPV types: 13 carcinogenic high-risk HPV types (HR-HPVs), 2 probably carcinogenic high-risk HPV types (PHR-HPVs) and 5 carcinogenic low-risk HPV types (LR-HPVs). The most frequent HPV genotypes found in all specimens were HPV16 (26.0%), 31 (10.7%) and 58 (8.0%). HPV 18 was only detected in 5.0%. Co-infections were found in 30.7% of CIN 1 and 18.4% cases of CIN2-3. The highest percentage of HR HPVs was found in those specimens with a CIN2-3 lesion (93.7%). As our study shows the current tetravalent vaccine could be effective in our geographical area for preventing all the invasive cervical carcinomas. In addition, upon the estimates of the important presence of other HR-HPV types – such as 31, 58, 33 and 52 – in different preneoplasic lesions the effectiveness of HPV vaccination in our geographical area, and others with similar genotype distribution, should be limited

  11. Frequency distribution of HCV genotypes among chronic hepatitis C patients of Khyber Pakhtunkhwa

    OpenAIRE

    Azam Sadiq; Ali Ijaz; Ali Sajid; Ahmad Bashir

    2011-01-01

    Abstract Background Hepatitis C Virus (HCV) genotypes frequency is important for the predication of response to therapy and duration of treatment. Despite variable response rates experienced in the case of Interferon (IFN) -based therapies, there was scarcity of data on HCV genotypes frequency in Khyber Pakhtunkhwa (KPK). Study Design A total of 200 blood samples were collected from chronic HCV patients prior to the initiation of anti-viral therapy. The study population included patients from...

  12. Distribution of human papillomavirus (HPV) genotypes in genital warts from males in Slovenia:

    OpenAIRE

    Kocjan, Boštjan; Poljak, Mario; Potočnik, Marko; Seme, Katja

    2007-01-01

    Background: Genital warts (GWs) are the most frequent benign tumors in the anogenital region of both males and females. Human papillomaviruses (HPV) are etiologically associated with the development of virtually all GWs. HPV-6 and HPV-11 are the most commonly detected HPV genotypes, but at least 20 other alpha-HPV genotypes have occasionally been found in GW tissue specimens. Objective: There is limited knowledge of GWs in Slovenia. Thus in this study we tested 55 GW tissue specimens collecte...

  13. Distribution of periphytic algae in wetlands (Palm swamps, Cerrado), Brazil.

    Science.gov (United States)

    Dunck, B; Nogueira, I S; Felisberto, S A

    2013-05-01

    The distribution of periphytic algae communities depends on various factors such as type of substrate, level of disturbance, nutrient availability and light. According to the prediction that impacts of anthropogenic activity provide changes in environmental characteristics, making impacted Palm swamps related to environmental changes such as deforestation and higher loads of nutrients via allochthonous, the hypothesis tested was: impacted Palm swamps have higher richness, density, biomass and biovolume of epiphytic algae. We evaluated the distribution and structure of epiphytic algae communities in 23 Palm swamps of Goiás State under different environmental impacts. The community structure attributes here analyzed were composition, richness, density, biomass and biovolume. This study revealed the importance of the environment on the distribution and structuration of algal communities, relating the higher values of richness, biomass and biovolume with impacted environments. Acidic waters and high concentration of silica were important factors in this study. Altogether 200 taxa were identified, and the zygnemaphycea was the group most representative in richness and biovolume, whereas the diatoms, in density of studied epiphyton. Impacted Palm swamps in agricultural area presented two indicator species, Gomphonema lagenula Kützing and Oedogonium sp, both related to mesotrophic to eutrophic conditions for total nitrogen concentrations of these environments. PMID:23917560

  14. Chronic Hepatitis C treatment for genotype 2 or 3 in Brazil: cost effectiveness analysis of peginterferon plus ribavirin as first choice treatment

    Directory of Open Access Journals (Sweden)

    Carine Raquel Blatt

    2014-04-01

    Full Text Available Brazilian Guidelines to HCV treatment (2007 recommended that the first choice treatment for patients with chronic hepatitis C (CHC and genotype 2 or 3 is interferon alpha (IFN plus ribavirin (RBV for 24 weeks. The aim of this study is compare the cost and effectiveness to Hepatitis C treatment in patients with genotype 2 or 3 of peginterferon alpha (PEG as the first choice of treatment within PEG for those that do not respond to IFN. The target population is CHC patients with genotype 2 or 3 in Brazil. The interventions are: PEG-SEC (first IFN plus RBV for 24 weeks, after, for non-responders and relapsers subsequently PEG plus RBV for 48 weeks; PEG-FIRST24 (PEG+RBV for 24 weeks. The type of the study is cost-effectiveness analysis. The data sources are: Effectiveness data from meta-analysis conducted on the Brazilian population. Treatment cost from Brazilian micro costing study is converted into USD (2010. The perspective is the Public Health System. The outcome measurements are Sustained Viral Response (SVR and costs. PEG-FIRST24 (SVR: 87.8%, costs: USD 8,338.27 was more effective and more costly than PEG-SEC (SVR: 79.2%, costs: USD 5,852.99. The sensitivity analyses are: When SVR rates with IFN was less than 30% PEG-FIRST is dominant. On the other hand, when SVR with IFN was more then 75% PEG-SEC is dominant (SVR=88.2% and costs USD $ 3,753.00. PEG-SEC is also dominant when SVR to PEG24 weeks was less than 54%. In the Brazilian context, PEG-FIRST is more effective and more expensive than PEG-SEC. PEG-SEC could be dominant when rates of IFN therapy are higher than 75% or rates of PEG24 therapy are lower than 54%.

  15. Studies on chaetognaths off Ubatuba region, Brazil: I. distribution and abundance

    OpenAIRE

    Liang Tsui Hua; Luz Amelia Vega-Pérez

    1994-01-01

    The distribution of chaetognath species off Ubatuba region, São Paulo State, Brazil, was studied during a program of multidisciplinary research. Ten species belonging to the genera Sagitta, Krohnita and Pterosagitta were identified. S. enflata was the dominant species followed by S.friderici and S. hispida. The species S. enflata, S. hispida, S. tenuis, S. bipunctata and JC pacifica were found in the Shelf water whereas S. serratodentata, S. minima, S. hexaptera and P. draco in the Tropical w...

  16. Genotypic distribution of human papillomavirus (HPV) and cervical cytology findings in 5906 Thai women undergoing cervical cancer screening programs

    OpenAIRE

    Kantathavorn, Nuttavut; Mahidol, Chulabhorn; Sritana, Narongrit; Sricharunrat, Thaniya; Phoolcharoen, Natacha; Auewarakul, Chirayu; Teerayathanakul, Narongchai; Taepisitpong, Chantanee; Saeloo, Siriporn; Sornsamdang, Gaidganok; Udomchaiprasertkul, Wandee; Krongthong, Waraphorn; Arnamwong, Arpaporn

    2015-01-01

    Background Cervical cancer is the major cause of morbidity and mortality in Thai women. Nevertheless, the preventive strategy such as HPV vaccination program has not been implemented at the national level. This study explored the HPV prevalence and genotypic distribution in a large cohort of Thai women. Methods A hospital-based cervical cancer screening program at Chulabhorn Hospital, Bangkok and a population-based screening program at a rural Pathum Thani Province were conducted using liquid...

  17. The diversity and distribution of Heliconia (Heliconiaceae) in Brazil A diversidade e distribuição de Heliconia (Heliconiaceae)

    OpenAIRE

    John Kress

    1990-01-01

    A review of the phylogenetic relationships of the Zingiberales is presented and the distribution patterns and diversity of Heliconia are discussed. Sixty-five species names have been applied to the heliconias that occur in Brazil. Of these 65 names, 28 are generally recognized synonyms. Of the remaining 37 species of Brazilian Heliconia, some controversy exists over the taxonomic status of at least eight. Two primary areas of distribution of species of Heliconia exist in Brazil: the Amazon ba...

  18. Distribution of Acanthamoeba Genotypes Isolated from Recreational and Therapeutic Geothermal Water Sources in Southwestern Iran.

    Science.gov (United States)

    Niyyati, Maryam; Saberi, Reza; Latifi, Alireza; Lasjerdi, Zohreh

    2016-01-01

    A comprehensive survey was conducted along 10 km of geothermal rivers in southwestern Iran. A total of 40 water samples were tested for the presence of Acanthamoeba spp., and genotypes were determined by targeting the diagnostic fragment 3 region of the 18S rRNA gene. The pathogenic potential of all positive isolates was also identified using tolerance ability test. High occurrences of Acanthamoeba (50%) were detected in the sampling areas. Based on sequencing analysis, isolates belonging to T4 (93.7%) and T2 (6.25%) genotypes were reported. Thermo- and osmotolerance tests revealed that five strains are highly pathogenic. Since every collection site of this study was associated with high human activity, posting of warning signs, monitoring of recreational water sources, and awareness of high-risk people are of utmost importance. To the best of our knowledge, the present research is the first to report T2 genotype from geothermal water sources in Iran. PMID:27127409

  19. Quantitative micro-PIXE comparison of elemental distribution in Ni-hyperaccumulating and non-accumulating genotypes of Senecio coronatus

    Science.gov (United States)

    Mesjasz-Przybyłowicz, J.; Przybyłowicz, W. J.; Prozesky, V. M.; Pineda, C. A.

    1997-07-01

    The Ni hyperaccumulator, plant species Senecio coronatus (Thunb.) Harv., Asteraceae is an example of plant adaptation mechanisms to different ecological conditions. This widespread species can inter alia be found on serpentine outcrops and the genotypes growing in serpentine soils show different ways of adaptation. The populations from two distant localities take up and translocate Ni in concentrations which are normally phytotoxic, while plants growing on a different site, in the vicinity of another hyperaccumulating species, absorb amounts which are typical for most of the plants found on serpentine soils. The NAC nuclear microprobe was used to compare the distribution of Ni and other elements in selected organs and cells with simultaneous use of PIXE and proton BackScattering (BS). Quantitative maps of stems showed large differences in concentrations and distributions of major and trace elements. In hyperaccumulating genotypes Ni is present everywhere within stem tissues, but the highest concentrations were found in the epidermis, cortex and phloem. In non-accumulating plants Ni was concentrated in the phloem. In the leaf epidermis Ni was concentrated in the cell walls for both accumulating and non-accumulating plants. These results suggest that biochemical diversity is more than morphological, because investigated genotypes belong to the same taxon.

  20. Age-age correlation for early selection of rubber tree genotypes in São Paulo State, Brazil

    OpenAIRE

    Paulo de Souza Gonçalves; Nelson Bortoletto; Átila Bento Beleti Cardinal; Lígia Regina Lima Gouvêa; Reginaldo Brito da Costa; Mário Luiz Teixeira de Moraes

    2005-01-01

    In a field trial involving 68 rubber tree (Hevea spp.) clones calculation of genotypic correlation coefficients revealed significant age-age correlation from age 1 to 6 (immature period) for girth A and for age 7 to 12 (mature period) for girth B and for age 7 to 12 (production of latex) for yield. Rank correlation coefficients between all immature ages of girth (girth A), all ages of mature girth (girth B) and all annual rubber production (yield) were significant for the three traits, with t...

  1. HPV prevalence and genotype distribution in a population-based split-sample study of well-screened women using CLART HPV2 human papillomavirus genotype microarray system

    DEFF Research Database (Denmark)

    Bonde, Jesper; Rebolj, Matejka; Ejegod, Ditte Møller;

    2014-01-01

    BACKGROUND: Human papillomavirus (HPV) genotyping assays are becoming increasingly attractive for use in mass screening, as they offer a possibility to integrate HPV screening with HPV vaccine monitoring, thereby generating a synergy between the two main modes of cervical cancer prevention....... The Genomica CLART HPV2 assay is a semi-automated PCR-based microarray assay detecting 35 high-risk and low-risk HPV genotypes. However, few reports have described this assay in cervical screening. An aim of the present study, Horizon, was to assess the prevalence of high-risk HPV infections in Copenhagen...... cytology, CLART HPV2 and Hybrid Capture 2 (HC2). RESULTS: At least one of the 35 defined genotypes was detected by CLART in 1,896 (37%) samples. The most frequent high-risk genotypes were HPV 16 (7%), HPV 52 (5%), and HPV 31 (4%). The most frequent low-risk genotypes were HPV 53 (5%), HPV 61 (4%), and HPV...

  2. Brazil

    International Nuclear Information System (INIS)

    Technological advances by newly industrialized countries (NICs) have become a central concern of the recent literature on the political economy of development. Striking a fatal blow to dependency thinking, in so far as it had diagnosed a structural barrier to technological development, these countries have absorbed foreign technology and have developed a very impressive domestic technological capacity. Moreover, their exports have evolved from a traditional reliance on raw materials and unprocessed goods to include increasingly sophisticated manufactured goods and technology itself. The capabilities, motivations, and structures behind nuclear exports must be examined in light of these secular trends. This paper reports on this exploratory analysis of the country's emergence as a nuclear supplier which focuses on six major areas: the balance of motivations and constraints underlying Brazil's nuclear export potential; areas of extant capabilities that would allow the country to play a significant role as a nuclear supplier; formal and informal structures beneath nuclear export policy; patterns of nuclear trade as reflected in past transactions; prospects for continuity and change; generalizability of findings to other emerging suppliers

  3. Distribution of multilocus genotypes of Escherichia coli within and between host families.

    OpenAIRE

    Caugant, D A; Levin, B. R.; Selander, R K

    1984-01-01

    Isolates from the intestinal Escherichia coli flora of 28 members of five families (including parents, children, and household pets) in Amherst, Massachusetts, and Rochester, New York, were characterized by the electrophoretic mobilities of 12 enzymes to estimate the extent of sharing of strains among associated and unassociated hosts. Among the 655 isolates examined, 60 different combinations of electromorphs (electrophoretic types or ETs), each representing a distinctive multilocus genotype...

  4. Distribution of Acanthamoeba Genotypes Isolated from Recreational and Therapeutic Geothermal Water Sources in Southwestern Iran

    OpenAIRE

    Niyyati, Maryam; Saberi, Reza; Latifi, Alireza; LASJERDI, Zohreh

    2016-01-01

    A comprehensive survey was conducted along 10 km of geothermal rivers in southwestern Iran. A total of 40 water samples were tested for the presence of Acanthamoeba spp., and genotypes were determined by targeting the diagnostic fragment 3 region of the 18S rRNA gene. The pathogenic potential of all positive isolates was also identified using tolerance ability test. High occurrences of Acanthamoeba (50%) were detected in the sampling areas. Based on sequencing analysis, isolates belonging to ...

  5. Genotype distribution of cervical human papillomavirus DNA in women with cervical lesions in Bioko, Equatorial Guinea

    Directory of Open Access Journals (Sweden)

    Carro-Campos Patricia

    2009-09-01

    Full Text Available Abstract Background The HVP vaccine is a useful tool for preventing cervical cancer. The purpose of this study is to determine the most frequent HPV genotypes in Equatorial Guinea in order to develop future vaccination strategies to apply in this country. Methods A campaign against cervical cancer was carried out in the area on a total of 1,680 women. 26 of the women, following cytological screening, were treated surgically with a loop electrosurgical excision procedure (LEEP. Cases were studied histologically and were genotyped from paraffin blocks by applying a commercial kit that recognized 35 HPV types. Results Cytological diagnoses included 17 HSIL, 1 LSIL, 5 ASC-H and 3 AGUS. Histological diagnosis resulted in 3 cases of microinvasive squamous cell carcinoma stage IA of FIGO, 9 CIN-3, 8 CIN-2, 2 CIN-1, 3 flat condylomas and mild dysplasia of the endocervical epithelium. Fifteen of twenty-five cases genotyped were positive for HPV (60%. HPV 16 and 33 were identified in four cases each, HPV 58 in two other cases, and HPV 18, 31, 52, and 82 in one case, with one HPV 16 and 58 coinfection. Conclusion The frequency of HPV types in the African area varies in comparison to other regions, particularly in Europe and USA. Vaccination against the five most common HPV types (16, 33, 58, 18, and 31 should be considered in the geographic region of West Africa and specifically in Equatorial Guinea.

  6. Hepatitis A Virus Genotype Distribution during a Decade of Universal Vaccination of Preadolescents

    Directory of Open Access Journals (Sweden)

    Lucía D’Andrea

    2015-03-01

    Full Text Available A universal vaccination program among preadolescents was implemented in Catalonia, Spain, during the period of 1999–2013 and its effectiveness has been clearly demonstrated by an overall significant attack rate reduction. However, reductions were not constant over time, and increases were again observed in 2002–2009 due to the occurrence of huge outbreaks. In the following years, in the absence of large outbreaks, the attack rate decreased again to very low levels. However, an increase of symptomatic cases in the <5 age group has recently been observed. This is an unexpected observation since children younger than 6 are mostly asymptomatic. Such a long vaccination campaign offers the opportunity to analyze not only the effectiveness of vaccination, but also the influence of the circulating genotypes on the incidence of hepatitis A among the different age groups. This study has revealed the emergence of genotype IC during a foodborne outbreak, the short-lived circulation of vaccine-escape variants isolated during an outbreak among the men-having-sex-with-men group, and the association of genotype IIIA with the increase of symptomatic cases among the very young. From a public health perspective, two conclusions may be drawn: vaccination is better at an early age, and the vaccination schedule must be complete and include all recommended vaccine doses.

  7. Rediscovery and geographic distribution of Philodryas agassizii (Jan, 1863 (Squamata: Dipsadidae in the state of Paraná, Southern Brazil

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    Gilberto Alves de Souza Filho

    2014-03-01

    Full Text Available Philodryas agassizii (Dipsadidae occurs in Brazil, Argentina, and Uruguay; in Brazil, it has been recorded in open areas of the regions Northeast, Central-West, Southeast and South. In the state of Paraná, it has only old records in southeastern of the state. We report, here, the rediscovery of P. agassizii in Paraná, forty years after the last record, and review its distribution within the state, including the central-south region.

  8. Rediscovery and geographic distribution of Philodryas agassizii (Jan, 1863) (Squamata: Dipsadidae) in the state of Paraná, Southern Brazil

    OpenAIRE

    Gilberto Alves de Souza Filho; Luciano Leandro Plombon

    2014-01-01

    Philodryas agassizii (Dipsadidae) occurs in Brazil, Argentina, and Uruguay; in Brazil, it has been recorded in open areas of the regions Northeast, Central-West, Southeast and South. In the state of Paraná, it has only old records in southeastern of the state. We report, here, the rediscovery of P. agassizii in Paraná, forty years after the last record, and review its distribution within the state, including the central-south region.

  9. Distribution, management and diversity of yam local varieties in Brazil: a study on Dioscorea alata L.

    Science.gov (United States)

    Siqueira, M V B M; Nascimento, W F; Silva, L R G; Ferreira, A B; Silva, E F; Ming, L C; Veasey, E A

    2014-02-01

    Widely spread in the tropics, yams were introduced into Brazil during the colonial period and are currently grown throughout the country. Despite its importance as a pharmacological and food source, there is a lack of studies describing how and where this tuber is grown in Brazil. The aim of this study was to provide an overview of the cultivation and distribution of Dioscorea alata in different Brazilian regions. A total of 63 farmers were visited in different municipalities and communities in four regions in the country: South, Southeast, Northeast and Midwest. Semi-structured interviews were conducted to collect socio-economic, use, management and diversity data for this crop. The majority of interviewers were men, married, with children, using retirement benefits and agriculture as income and family labour as the main support in the yam cultivation. A wide distribution of this species was found, with the occurrence of D. alata in the four sampled regions. A variety of vernacular names for this species was collected, differing according to the region where it is cultivated. Most farmers cultivate yams in fields, however an increased usage of home gardens for the cultivation of this tuber was found. Also, most farmers cultivate yams in association with other crops in areas of different sizes and slash and burn practices, although mostly disappearing, are still being used by many farmers. The results of this study provide more concrete data on the distribution and diversity of this important crop. PMID:25055086

  10. Seasonal distribution of aliphatic hydrocarbons in the Vaza Barris Estuarine System, Sergipe, Brazil.

    Science.gov (United States)

    Barbosa, José Carlos S; Santos, Lukas G G V; Sant'Anna, Mércia V S; Souza, Michel R R; Damasceno, Flaviana C; Alexandre, Marcelo R

    2016-03-15

    The seasonal assessment of anthropogenic activities in the Vaza Barris estuarine river system, located in the Sergipe state, northeastern Brazil, was performed using the aliphatic hydrocarbon distribution. The aliphatic hydrocarbon and isoprenoid (Pristane and Phytane) concentrations ranged between 0.19μgg(-1) and 8.5μgg(-1) of dry weight. Data were analyzed using Kruskal-Wallis test, with significance level set at p n-alkanes/n-C16, Low Molecular Weight/High Molecular Weight ratio (LMW/HMW) and Terrigenous to Aquatic Ratio (TAR) suggested biogenic input of aliphatic hydrocarbons for most samples, with significant contribution of higher plants. PMID:26837270

  11. Spatial distribution of mollusks in the intertidal zone of sheltered beaches in southeastern of Brazil

    OpenAIRE

    2003-01-01

    The spatial distribution of mollusks in the intertidal zone was examined monthly from August 1995 through July 1997, in Enseada, Barra Velha and Araçá beaches in southeastern of Brazil. One study sector was selected in Enseada and Barra Velha, and two sectors in Araçá (Araçá I and Araçá II). The sectors were 10 m wide and equivalent in length to the width of the intertidal zone. Each sector was divided into three horizontal levels: lower, middle and upper, where the samples were taken with a ...

  12. Spatial distribution of stored grain insects in a rice storage and processing facility in Brazil

    OpenAIRE

    Lazzari, F. N.; Lazzari, F. A.; Lazzari, S. M. N.; Ceruti, F. C.

    2010-01-01

    This study describes the spatial distribution of stored product insects captured biweekly using foodbaited cage traps in a large rice storage and processing facility, in the state of Rio Grande do Sul, Brazil. Monitoring started in August 2009 and will be carried out for 1 year, the first 5 months of sampling being presented in this study. From end of August 2009 until the end of December 2009, a total of 9893 insects were captured in the 99 cage traps. The most abundant species were: Carpop...

  13. Adaptabilidade e estabilidade de genótipos de girassol no Brasil Central Adaptability and stability of sunflower genotypes in Central Brazil

    Directory of Open Access Journals (Sweden)

    Anna Karolina Grunvald

    2008-11-01

    Full Text Available O objetivo deste trabalho foi avaliar a adaptabilidade e estabilidade de genótipos de girassol, no Brasil Central, quanto ao rendimento de grãos e de óleo. Os dados foram obtidos de ensaios de genótipos de girassol coordenados pela Embrapa Soja, de 2004 a 2007. Foram usados os métodos de Eberhart & Russell, Porto et al., Rocha et al. e Annicchiarico. Foi realizada a decomposição do índice de recomendação de Annicchiarico nos ambientes favoráveis e desfavoráveis. Este método e o de Porto et al. foram similares e mais adequados para avaliar a adaptabilidade dos genótipos. Em relação ao rendimento de grãos, as variedades BRSGira 02 e Nutrissol apresentaram adaptação ampla. Os híbridos Agrobel 959, MG50 e V03005 e as variedades Catissol e Multissol apresentaram adaptação aos ambientes favoráveis, e os híbridos BRHS 02 e BRHS 04 apresentaram adaptação aos ambientes desfavoráveis. Quanto ao rendimento de óleo, os híbridos Agrobel 959, V03005, MG50, VDH 487, EXP 1441, EXP 1447 e EXP 1446 e as variedades BRSGira 01, BRSGira 02 e Nutrissol apresentaram adaptação ampla. O híbrido MG52 e as variedades Catissol e Multissol mostraram adaptação aos ambientes favoráveis, e BRHS 04 e BRHS 02 mostraram adaptação aos ambientes desfavoráveis. Os genótipos selecionados mostraram-se estáveis, mas em níveis diferenciados.The objective of this study was to evaluate the adaptability and stability of sunflower genotype grain and oil yield, in Central Brazil. The analyzed data were obtained from sunflower genotype trials coordinated by Embrapa Soja, from 2004 to 2007. Genotype adaptability and stability were evaluated using the methods of Eberhart & Russell, Porto et al., Rocha et al., and Annicchiarico. The Annicchiarico method divides sites into favorable and unfavorable environments. This method and the one of Porto et al. were similar and more adequate to evaluate genotypic adaptability. For grain yield, the varieties BRSGira

  14. Phenotypic and genotypic characteristics of shiga toxin-producing Escherichia coli strains isolated from children in São Paulo, Brazil

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    Beatriz EC Guth

    2002-12-01

    Full Text Available The biochemical and serological characteristics, virulence properties, and genetic relatedness of Shiga toxin-producing Escherichia coli (STEC strains isolated in São Paulo, from April 1989 through March 1990, were determined. This is also the first report on clinic findings of human STEC infections in Brazil. The only three STEC strains identified in that period were lysine decarboxylase negative, belonged to serotype O111ac: non-motile, were Stx1 producers, carried the eae and astA genes, and 2 of them also presented the EHEC-hly sequence. The children carrying STEC were all boys, with less than two years old, and had no previous history of hospitalization. None of them presented blood in stools. Vomiting, cough and coryza were the most common clinical manifestations observed. Although the STEC strains were isolated during summer months, and presented similar phenotypic and genotypic characteristics, carbohydrate fermentation patterns and PFGE analysis suggested that these diarrheal episodes were not caused by a single clone.

  15. Detection of porcine circovirus genotypes 2a and 2b in aborted foetuses from infected swine herds in the State of São Paulo, Brazil

    Directory of Open Access Journals (Sweden)

    de Castro Alessandra MMG

    2012-05-01

    Full Text Available Abstract Background Porcine circovirus type 2 (PCV2 has been associated with several disease complexes, including reproductive failure. The aim of this study was to identify the subtypes of PCV2 that are associated with reproductive failure in pigs from the State of São Paulo, Brazil and to investigate co-infections with other infectious organisms. Findings Samples of 168 aborted foetuses or mummified foetuses from five farrow-to-finish swine farms known to be infected with PCV2 and located in the State of São Paulo were tested for PCV2 by polymerase chain reaction (PCR. Positive samples were additionally tested for porcine parvovirus (PPV, Leptospira spp. and Brucella spp. by PCR. PCV2 was detected in 18 of the samples (10.7%. PPV, Brucella spp. and Leptospira spp were found in 2, 10 and 0 cases, respectively. Eleven PCV2 strains were sequenced and determined to be either genotype 2a (n = 1 or 2b (n = 10. Conclusions The findings indicate that the frequency of PCV2 infections in aborted porcine foetuses from the State of São Paulo is rather low (10.7% and that co-infection with other pathogens is common and may be involved in PCV2 associated reproductive failure. No repeatable, characteristic amino acid motifs for regions of the PCV2 capsid protein seemed to be associated with abortion in sows.

  16. Frequency and genotypic distribution of GB virus C (GBV-C among Colombian population with Hepatitis B (HBV or Hepatitis C (HCV infection

    Directory of Open Access Journals (Sweden)

    Carrilho Flair J

    2011-07-01

    Full Text Available Abstract Background GB virus C (GBV-C is an enveloped positive-sense ssRNA virus belonging to the Flaviviridae family. Studies on the genetic variability of the GBV-C reveals the existence of six genotypes: genotype 1 predominates in West Africa, genotype 2 in Europe and America, genotype 3 in Asia, genotype 4 in Southwest Asia, genotype 5 in South Africa and genotype 6 in Indonesia. The aim of this study was to determine the frequency and genotypic distribution of GBV-C in the Colombian population. Methods Two groups were analyzed: i 408 Colombian blood donors infected with HCV (n = 250 and HBV (n = 158 from Bogotá and ii 99 indigenous people with HBV infection from Leticia, Amazonas. A fragment of 344 bp from the 5' untranslated region (5' UTR was amplified by nested RT PCR. Viral sequences were genotyped by phylogenetic analysis using reference sequences from each genotype obtained from GenBank (n = 160. Bayesian phylogenetic analyses were conducted using Markov chain Monte Carlo (MCMC approach to obtain the MCC tree using BEAST v.1.5.3. Results Among blood donors, from 158 HBsAg positive samples, eight 5.06% (n = 8 were positive for GBV-C and from 250 anti-HCV positive samples, 3.2%(n = 8 were positive for GBV-C. Also, 7.7% (n = 7 GBV-C positive samples were found among indigenous people from Leticia. A phylogenetic analysis revealed the presence of the following GBV-C genotypes among blood donors: 2a (41.6%, 1 (33.3%, 3 (16.6% and 2b (8.3%. All genotype 1 sequences were found in co-infection with HBV and 4/5 sequences genotype 2a were found in co-infection with HCV. All sequences from indigenous people from Leticia were classified as genotype 3. The presence of GBV-C infection was not correlated with the sex (p = 0.43, age (p = 0.38 or origin (p = 0.17. Conclusions It was found a high frequency of GBV-C genotype 1 and 2 in blood donors. The presence of genotype 3 in indigenous population was previously reported from Santa Marta region in

  17. IS6110 restriction fragment length polymorphism of Mycobacterium tuberculosis isolated from patients with pulmonary tuberculosis in Campinas, Brazil: evidence of intercontinental distribution of strains

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    Ana Lucia Roscani Calusni

    2003-07-01

    Full Text Available Tuberculosis (TB is a major concern in developing countries. In Brazil, few genotyping studies have been conducted to verify the number of IS6110 copies present in local prevalent strains of Mycobacterium tuberculosis, the distribution and clustering of strains. IS6110 DNA fingerprinting was performed on a sample of M. tuberculosis isolates from patients with AFB smear-positive pulmonary TB, at a hospital in Brazil. The IS6110 profiles were analyzed and compared to a M. tuberculosis database of the Houston Tuberculosis Initiative, Houston, US. Seventy-six fingerprints were obtained from 98 patients. All M. tuberculosis strains had an IS6110 copy number between 5-21 allowing for differentiation of the isolates. Human immunodeficiency virus infection was confirmed in nearly half the patients of whom data was available. Fifty-eight strains had unique patterns, while 17 strains were grouped in 7 clusters (2 to 6 strains. When compared to the HTI database, 6 strains matched isolates from El Paso, Ciudad de Juarez, Houston, and New York. Recently acquired infections were documented in 19% of cases. The community transmission of infection is intense, since some clustered strains were recovered during the four-year study period. The intercontinental dissemination of M. tuberculosis strains is suspected by demonstration of identical fingerprints in a distant country.

  18. [Distribution of hepatitis C virus genotypes among patients with chronic hepatitis C infection in Akdeniz University Hospital, Antalya, Turkey: a five-year evaluation].

    Science.gov (United States)

    Sağlik, İmran; Mutlu, Derya; Öngut, Gözde; İnan, Dilara; Öğünç, Dilara; Can Sarinoğlu, Rabia; Özhak Baysan, Betil; Gültekin, Meral; Çolak, Dilek

    2014-07-01

    Hepatitis C virus (HCV) is one of the major causes of chronic hepatitis. It is important to know the genotypes of HCV in the decision of the HCV related chronic hepatitis therapy. The aim of this study was to evaluate the HCV genotypes determined at the Microbiology Laboratory of Akdeniz University Hospital, and to evaluate the changes in the distribution of the genotypes within the last five years. A total of 422 blood samples from HCV-RNA positive chronic hepatitis C patients (219 male, 203 female; age range: 8-79 yrs, mean age 46.3 ± 15.5 yrs) which were sent to our laboratory for genotyping between 2009-2013 period, were analyzed retrospectively. HCV-RNA extractions were performed in an automated system (EZ1 Virus Mini Kit v2.0, Qiagen, Germany), and a commercial reverse hybridization line probe-based assay (LIPA; GEN-C RT-PCR, Italy) was carried out for genotyping, For viral load determinations, a real-time PCR method (Cobas TaqMan HCV, Roche Diagnostics, Germany) was used. Demographic data of the patients were obtained from the hospital information systems and electronic patients' files. Out of the 422 patients, genotype 1b was detected in 63.3% (n= 267), genotype 1a in 14.7% (n= 62), genotype 3a in 11.1% (n= 47), genotype 2b in 0.9% (n= 4), genotype 4e in 0.2% (n= 1). The subtypes couldn't be determined for 5.4% (n= 23), 2.6% (n= 11) and 1.4% (n= 6) of the patients infected with genotype 1, 2 and 4, respectively. One (0.2%) patient, was coinfected with genotype 1 and 4. Of the patients, 40 were foreign-born (16 cases from Russia; 4 of each from Ukraine and Georgia; 3 of each from Turkmenistan, Kyrgyzstan, and Germany; one of each from Tajikistan, Azerbaijan, Uzbekistan, Chechnya, Moldova, Switzerland and Romania) and among these patients genotype 3a (19/40; 47.5%) was the most common genotype followed by genotype 1b (17/40; 42.5%). Median values of HCV viral load were 668.500 IU/ml (range: 2.000-9.630.000) in the whole group; while it was 732.000 IU

  19. Wilson's disease in Southern Brazil: genotype-phenotype correlation and description of two novel mutations in ATP7B gene

    Directory of Open Access Journals (Sweden)

    Ricardo Schmitt de Bem

    2013-08-01

    Full Text Available OBJECTIVE: Wilson's disease (WD is an inborn error of metabolism caused by abnormalities of the copper-transporting protein encoding gene ATP7B. In this study, we examined ATP7B for mutations in a group of patients living in southern Brazil. METHODS: 36 WD subjects were studied and classified according to their clinical and epidemiological data. In 23 subjects the ATP7B gene was analyzed. RESULTS: Fourteen distinct mutations were detected in at least one of the alleles. The c.3207C>A substitution at exon 14 was the most common mutation (allelic frequency=37.1% followed by the c.3402delC at exon 15 (allelic frequency=11.4%. The mutations c.2018-2030del13 at exon 7 and c.4093InsT at exon 20 are being reported for the first time. CONCLUSION: The c.3207C>A substitution at exon 14, was the most common mutation, with an allelic frequency of 37.1%. This mutation is the most common mutation described in Europe.

  20. Genotyping, serotyping and determination of mating-type of Cryptococcus neoformans clinical isolates from São Paulo State, Brazil.

    Science.gov (United States)

    Matsumoto, Marcelo Teruyuki; Fusco-Almeida, Ana Marisa; Baeza, Lilian Cristiane; Melhem, Márcia de Souza Carvalho; Medes-Giannini, Maria José Soares

    2007-01-01

    The basidiomycetous yeast Cryptococcus neoformans is an important fungal pathogen mainly in immunocompromised patients. In this study, 47 clinical isolates of C. neoformans from regions of São Paulo State were studied serologically by using the Crypto Check Iatron RM 304-K kit, their genetic diversity was estimated by PCR-fingerprinting with a microsatellite-specific sequence (GACA)(4), RAPD with primer 6 (Amersham Pharmacia Biotech), PCR-restriction fragment length polymorphism (RFLP) analysis of the phospholipase B gene (PLB1) digested with AvaI and mating type analysis by PCR. All 47 strains isolated from HIV positive patients included in this study were serotype A and MATalpha. The majority of the isolates (45/47) were VNI and only two were VNII by PCR-fingerprinting and PCR-RFLP analysis. High degree of homogeneity was observed when (GACA)(4) was used, being highly correlated (> 0.9). In contrast, the RAPD analysis was more heterogeneous with higher number of molecular profiles. By PCR-RFLP, no new molecular type was found, enhancing the suggestion that the differences based on conserved gene as PLB1, can be resultant of ongoing divergent evolution within the C. neoformans complex, into the current eight subtypes. Our results furnish new information on the molecular epidemiology of C. neoformans in the southeast region of Brazil. PMID:17384819

  1. Potential geographic distribution and conservation of Audubon's Shearwater, Puffinus lherminieri in Brazil

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    Ana Cecília P.A. Lopes

    2014-01-01

    Full Text Available Audubon's Shearwater (Puffinus lherminieri Lesson 1839 is a tropical seabird occurring mainly between southern Canada and the southeast coast of Brazil. Puffinus lherminieri is considered Critically Endangered on the Brazilian Red List because it only occurs in two known localities, both of which contain very small populations. However, many offshore islands along the Brazilian coast are poorly known and the discovery of new colonies would be of considerable significance for the conservation of this species. The aim of this study was to estimate the potential geographic distribution of Audubon's Shearwater in Brazil, based on ecological niche model (ENM using Maxent algorithm with layers obtained from AquaMaps environmental dataset. The ENM was based on 37 records for reproduction areas in North and South America. The model yielded a very broad potential distribution, covering most of the Atlantic coast ranging from Brazil to the US. When filtered for islands along the Brazilian coast, the model indicates higher levels of environmental suitability near the states of São Paulo, Rio de Janeiro, Espírito Santo and Bahia. However, P. lherminieri prefers islands in environments with warm saline water. Thus, based on the influence of currents that act on the Brazilian coast we can infer undiscovered colonies are most likely to occur on islands on coast of Bahia, Espírito Santo and extreme north of the Rio de Janeiro. These should be intensively surveyed while the islands south of Cabo Frio should be discarded. The existence of new populations would have profound effects on the conservation status of this enigmatic and rarely seen seabird.

  2. Detection of Onchocerca volvulus (Nematoda: Onchocercidae infection in vectors from Amazonian Brazil following mass Mectizan™ distribution

    Directory of Open Access Journals (Sweden)

    Verônica Marchon-Silva

    2007-03-01

    Full Text Available Detection of Onchocerca volvulus in Simulium populations is of primary importance in the assessment of the effectiveness of onchocerciasis control programs. In Brazil, the main focus of onchocerciasis is in the Amazon region, in a Yanomami reserve. The main onchocerciasis control strategy in Brazil is the semi-annually mass distribution of the microfilaricide ivermectin. In accordance with the control strategy for the disease, polymerase chain reaction (PCR was applied in pools of simuliids from the area to detect the helminth infection in the vectors, as recommended by the Onchocerciasis Elimination Program for the Americas and the World Health Organization. Systematic sampling was performed monthly from September 1998 to October 1999, and a total of 4942 blackflies were collected from two sites (2576 from Balawaú and 2366 from Toototobi. The molecular methodology was found to be highly sensitive and specific for the detection of infected and/or infective blackflies in pools of 50 blackflies. The results from the material collected under field conditions showed that after the sixth cycle of distribution of ivermectin, the prevalence of infected blackflies with O. volvulus had decreased from 8.6 to 0.3% in Balawaú and from 4 to 0.1% in Toototobi.

  3. H. pylori clinical isolates have diverse babAB genotype distributions over different topographic sites of stomach with correlation to clinical disease outcomes

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    Sheu Shew-Meei

    2012-05-01

    Full Text Available Abstract Background Intragenomic recombination between babA and babB mediates antigenic variations and may help H. pylori colonization. This study determined whether variable genotypes of babA and babB correlate to different clinical disease outcomes, and can distribute over the different gastric niches. Results This study enrolled 92 clinical strains (45 from peptic ulcer, 27 from gastritis, and 20 from gastric cancer to detect whether the babA and babB are at locus A or B by PCR reactions using the primers designed from the upstream and variable region of the babA and babB genes. Four genotypes of babA and babB (A B, AB B, A AB, AB AB were found. The distribution of the 4 genotypes in 92 clinical strains was significantly different among patients with different gastric diseases (p vs. 9.7%, p p p > 0.05. Besides, the study enrolled 19 patients to verify whether variable genotypes of babAB existed in the different gastric niches. Among the patients infected with more than one babAB genotypes over antrum and corpus, there were higher rate of genotypes as A B or AB AB in isolates from antrum than in those from corpus (75.0 % vs. 16.7%, p  Conclusions The H. pylori isolate with the AB AB genotype correlates with an increased gastric cancer risk, and colonize in an antrum predominant manner.

  4. X-Ray equipment in Brazil: Distribution by political region and equipment type

    International Nuclear Information System (INIS)

    Full text: During 2001 e 2002 Brazil's Health Ministry performed a national census of health services, CNES - National Database of Health-Care Services. The resulting records contain the equipment and personnel available in each service. This data was processed, selected and compared to the most recent brazilian population census recently consolidated by IBGE - Brazilian Institute of Geography and Statistics. In order to generate useful data for planning radiation protection sanitary surveillance actions, queries were made in the National Database of Health Services to select distributions of X-ray equipment's by city, state and region. Population and number of physicians data we used to calculate coverage indexes, aiming to classify them according to health care levels adopted by UNSCEAR publication and make comparisons. Geographical maps were plotted from several different data distributions, showing X-ray equipment concentrations, medical and population coverage indexes. (orig.)

  5. Microspatial Distributional Patterns of Vectors of Cutaneous Leishmaniasis in Pernambuco, Northeastern Brazil

    Directory of Open Access Journals (Sweden)

    Maria Rita Donalisio

    2012-01-01

    Full Text Available The purpose of this study is to analyze the spatial distribution and population trends through time of Lutzomyia species in a long-term focus of cutaneous leishmaniasis transmission in an Atlantic Forest area, northeastern Brazil. Sand fly populations of different ecological niches were monitored spatiotemporally in 2009. To summarize vegetation characteristics and phenology, we calculated the Normalized Difference Vegetation Index from Landsat images. Using niche modeling approaches, we assessed suites of environmental factors to identify areas of transmission risk. Although 12 species were detected, L. whitmani was the most abundant and broadly distributed across the area, particularly in peridomiciliary locations, and associated negatively with denser vegetation areas. On the other hand, L. complexa, L. sordelli, and L. tupynambai were found almost exclusively in forested areas (<0.05, and associated positively with denser vegetation. Lutzomyia species' occurrences are related to specific environmental combinations (with contrast among species in the region.

  6. History, distribution, and seasonal abundance of the Least Tern Sternula antillarum (Aves: Charadriiformes: Sternidae in Brazil

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    Caio J. Carlos

    2013-04-01

    Full Text Available We review existing data on the distribution of the Least Tern, Sternula antillarum along the Brazilian coast, based on the literature and museum specimens, and present results of a year-long study (October 2008 to September 2009 on the seasonal abundance of this species on a large tidal flat area, Cajuais Bank, in the State of Ceará, north-eastern Brazil. We evaluate whether the observed variation in the abundance of terns is due to the occurrence of an undocumented breeding colony, or alternatively, whether it results from an influx of migrants from the Northern Hemisphere. The recovery of historical data revealed that all literature references on the distribution of birds in the Americas, published up to the late 1990s include Brazil in the non-breeding range of the Least Tern. This inclusion is based on a few, old (late 19th and early 20th centuries museum specimens, all of which have been collected on the northern and north-eastern coasts of this country'. From the late 1980s, birds continued to be occasionally recorded along the coastline, running from the State of Amapá (01°N up to the State of Bahia (10°S, with records of single individuals in south-eastern and southern Brazil. An alleged record from Rocas Atoll, 260 km off the Brazilian mainland, might tentatively refer to the Old World Little Tern S. albifrons. At Cajuais Bank, Least Terns occurred from October 2008 to April 2009, and in September 2009. The highest numbers (> 800 individuals were recorded in January-February (Southern Hemisphere's summer. The species was observed in rather small numbers (< 30 in March-April (early-mid Southern Hemisphere fall and in September (early Southern Hemisphere spring, being absent from the area in May-August (Southern Hemisphere's fall and winter. In October-December 2008 (Southern Hemisphere's spring, and September 2009 (early Southern Hemisphere's summer, no birds were in breeding plumage. In January, about 32% of the birds were in

  7. Epstein-Barr virus and human papillomavirus infections and genotype distribution in head and neck cancers.

    Directory of Open Access Journals (Sweden)

    Zeyi Deng

    Full Text Available To investigate the prevalence, genotypes, and prognostic values of Epstein-Barr virus (EBV and human papillomavirus (HPV infections in Japanese patients with different types of head and neck cancer (HNC.HPV and EBV DNA, EBV genotypes and LMP-1 variants, and HPV mRNA expression were detected by PCR from fresh-frozen HNC samples. HPV genotypes were determined by direct sequencing, and EBV encoded RNA (EBER was examined by in situ hybridization.Of the 209 HNC patients, 63 (30.1% had HPV infection, and HPV-16 was the most common subtype (86.9%. HPV E6/E7 mRNA expression was found in 23 of 60 (38.3% HPV DNA-positive cases detected. The site of highest prevalence of HPV was the oropharynx (45.9%. Among 146 (69.9% HNCs in which EBV DNA was identified, 107 (73.3% and 27 (18.5% contained types A and B, respectively, and 124 (84.9% showed the existence of del-LMP-1. However, only 13 (6.2% HNCs were positive for EBER, 12 (92.3% of which derived from the nasopharynx. Co-infection of HPV and EBER was found in only 1.0% of HNCs and 10.0% of NPCs. Kaplan-Meier survival analysis showed significantly better disease-specific and overall survival in the HPV DNA+/mRNA+ oropharyngeal squamous cell carcinoma (OPC patients than in the other OPC patients (P = 0.027 and 0.017, respectively. Multivariate analysis showed that stage T1-3 (P = 0.002 and HPV mRNA-positive status (P = 0.061 independently predicted better disease-specific survival. No significant difference in disease-specific survival was found between the EBER-positive and -negative NPC patients (P = 0.155.Our findings indicate that co-infection with HPV and EBV is rare in HNC. Oropharyngeal SCC with active HPV infection was related to a highly favorable outcome, while EBV status was not prognostic in the NPC cohort.

  8. Genotype distribution of Mycoplasma hyopneumoniae in swine herds from different geographical regions.

    Science.gov (United States)

    Dos Santos, Lucas F; Sreevatsan, Srinand; Torremorell, Montserrat; Moreira, Maria A S; Sibila, Marina; Pieters, Maria

    2015-02-25

    Genetic heterogeneity of Mycoplasma hyopneumoniae in pigs has been reported, however there has been limited reproducibility on the molecular methods employed so far. The aim of this study was to modify and standardize a high-resolution multiple locus variable number tandem repeat analysis (MLVA), to investigate the genetic variability of M. hyopneumoniae circulating in the United States of America (USA), Brazil, Mexico and Spain. The MLVA was standardized on the basis of the number of tandem repeats in two Mycoplasma adhesins, P97 and P146, which are proteins involved in the adherence of the pathogen to cilia. A total of 355 samples obtained from the four countries were analyzed. The Simpson's diversity index for the assay was D=0.976 when samples from all countries were combined. A large number of MLVA types (n=139) were identified, suggesting that multiple M. hyopneumoniae variants are circulating in swine. The locus P97 had 17 different types with 2-18 repeats. The P146 locus showed higher heterogeneity, with 34 different types, ranging from 7 to 48 repeats. MLVA types that presented more than 30 repeats in P146 were found in Spain and Brazil, while shorter repeats were observed in the USA and Mexico. This simplified MLVA method proved to be an efficient tool for typing M. hyopneumoniae with a high degree of stability, repeatability, and discriminatory power. In conclusion, M. hyopneumoniae showed a high variable number tandem repeat heterogeneity and this assay can be applied in molecular epidemiology investigations within farms and productions systems. PMID:25497236

  9. Distribution of multilocus genotypes of Escherichia coli within and between host families.

    Science.gov (United States)

    Caugant, D A; Levin, B R; Selander, R K

    1984-06-01

    Isolates from the intestinal Escherichia coli flora of 28 members of five families (including parents, children, and household pets) in Amherst, Massachusetts, and Rochester, New York, were characterized by the electrophoretic mobilities of 12 enzymes to estimate the extent of sharing of strains among associated and unassociated hosts. Among the 655 isolates examined, 60 different combinations of electromorphs (electrophoretic types or ETs), each representing a distinctive multilocus genotype, were identified, of which 85% were recovered from only a single individual. On average, 11% of the ETs isolated from the same family were shared by two or more members; 4.9% of ETs were shared among members of unassociated families living in the same city; and only 2% were shared by families in different cities. All three ETs that were recovered from multiple hosts in the present study are widespread clones that have been isolated from many other host individuals in North America and Sweden. PMID:6376625

  10. Estimation of apolipoprotein E genotype-specific relative mortality risks from the distribution of genotypes in centenarians and middle-aged men

    DEFF Research Database (Denmark)

    Gerdes, Lars Ulrik; Jeune, B; Ranberg, K A; Nybo, H; Vaupel, J W

    2000-01-01

    and data from a study of 40-year-old Danish men. Twenty-one percent of the centenarians were epsilon 2-carriers (genotypes epsilon 2 epsilon 2 and epsilon 3 epsilon 2) and 15% were epsilon 4-carriers (genotypes epsilon 4 epsilon 4 and epsilon 4 epsilon 3) compared to 13 and 29%, respectively, of the...... young men. The R-values were 0.95 (95% CI 0.88 to 1.02) for epsilon 2-carriers and 1.13 (95% CI 1.05 to 1.22) for epsilon 4-carriers, using epsilon 3 epsilon 3- and epsilon 4 epsilon 2 genotypes as reference. Corresponding values for epsilon 4-carriers were obtained by using published data from a French...

  11. Distribution and Abundance of Necrophagous Flies (Diptera: Calliphoridae and Sarcophagidae) in Maranhão, Northeastern Brazil

    OpenAIRE

    Pereira de Sousa, José Roberto; Carvalho-Filho, Fernando da Silva; Esposito, Maria Cristina

    2015-01-01

    This study aimed at surveying the local calliphorid and sarcophagid species in Maranhão State (Brazil) to determine their distribution and abundance, as well as the distribution of exotic Chrysomya species. In total, 18,128 calliphorid specimens were collected, distributed in 7 genera and 14 species. The species Hemilucilia semidiaphana (Rondani, 1850) and Paralucilia paraensis (Mello, 1969) were new state records. Chrysomya albiceps (Wiedemann, 1819) and Cochliomyia macellaria (F., 1775) wer...

  12. HCMV gB genotypes in cervical secretion and placenta tissues in the state of Espírito Santo, Southeastearn Brazil Genótipos gB de citomegalovírus humano em secreção cervical e placenta no Espírito Santo, Sudeste do Brasil

    Directory of Open Access Journals (Sweden)

    Liliana Cruz Spano

    2007-09-01

    Full Text Available Human cytomegalovirus (HCMV displays genetic variability in several regions, supposed to be related with strain-specific tissue tropism and immunopathogenesis. Based on sequence variation in the UL55 gene that encodes gB glycoprotein, HCMV strains can be assigned to one of four genotypes. Previous studies have addressed gB genotyping mostly by investigating strains derived from immunosuppressed patients, sometimes without previous knowledge about genotype distribution in a geographic area. The present study verified the distribution of HCMV gB genotypes of strains obtained from immunocompetent women at Vitória City, Espírito Santo State, Southeastern, Brazil. The HCMV genome was extracted from their cervical secretion, fetal and maternal placenta tissues (chorionic villous and decidua from abortion cases and from white blood cells (WBCs. HCMV genotyping was performed by restriction fragment length polymorphism analyses of amplified product from the high variability site of the UL55 gene. All four genotypes were observed in both cervical secretion and placenta, whereas in WBCs a single gB1 genotype was detected. HCMV gB1 and gB2 genotypes were detected, respectively, in nine and in six of the 23 studied samples, while gB3 and gB4 were each found in four separate samples of the total. The differences in genotype frequency were not considered statistically significant. No mixed genotype infection was observed. The results indicated that the four gB HCMV genotypes had no particular tropism for placenta tissues and that all genotypes circulated within immunocompetent women at the time and in the region of study.O citomegalovírus humano (HCMV apresenta variabilidade em diversas regiões do genoma, supostamente relacionada ao tropismo tecidual e imunopatogênese viral. Baseando-se na variação de seqüência do gene UL55 que codifica a glicoproteína gB, o HCMV pode ser classificado em um dos quatro genótipos. Estudos prévios têm investigado a

  13. Variations in Concentration and Distribution of Health-Related Elements Affected by Environmental and Genotypic Differences in Rice Grains

    Institute of Scientific and Technical Information of China (English)

    REN Xue-liang; LIU Qing-long; WU Dian-xing; SHU Qing-yao

    2006-01-01

    A research work was conducted to investigate the variations in concentration and distribution of health-related elements affected by environmental and genotypic differences in rice grains. The grain of Xieqingzao B (indica rice variety) and Xiushui 110 (japonica rice variety) were divided into: hull, bran and milled rice, based on the conventional rice consumption and process. Xieqingzao B was grown at four different locations, and at one location, it was planted in the same field and season as Xiushui 110. In addition, another four indica and four japonica varieties were cultivated in the same field and time to analyze the elements in milled rice. The average concentrations of total P and phytic acid P were the highest in the bran, followed by milled rice and hull; Zn, K, Mg, and As concentrations were the highest in bran, followed by hull and milled rice, while Fe, Ca, and Cu concentrations were the highest in the hull, but similar in bran and milled rice. The result indicated that genotype and environment significantly affected the concentrations of all the tested elements, while the distribution of the above elements in grains was not in the same order as concentration. Moreover, all the elements except 97.7% of Cu and 93.2% of Fe was deposited in the hull on average, were mostly distributed either in the bran (37.3% and 57.7% for K and phytic acid P) or in milled rice (41.7%, 42.6%, 40.3%, 49.8% for Zn, Mg, As, total P, respectively).

  14. Genotypic Difference of Plants in K—Enrichment Capability and the Distribution of K in Plant Rhizosphere

    Institute of Scientific and Technical Information of China (English)

    YANWEIDONG; SHIWEIMNG; 等

    1997-01-01

    Plant genotypic difference of potassium-enrichment capalbility and potassium(K) distribution at root-soil interace of different plant genotypes were studied by using seven plant species and eight varieties of tobacco(Nicotiana tabacum L.) The results indicated that K enrichment capability was: Ethiopian guizotia(Guizotia abyssinica Cass.)>feather cockscomb(Celosia argentea L.)>alligator alternanthera(Alternathera philoxeroides (Mart.) Griseb.)>tobacco>sesbania(Sesbania cannabina(Retz.)Pers.)>wheat(Triticum aestivum L.)>broadbean(Vicia faba L.).Ethiopian guizotia showed very high K-enrichment capability at different soil K levles,and the K content in its dry matter was over 110 mg kg-1 when soil K was fully supplied ,and about 60 mg kg-1 when no K fertilizer was applied.For alligator alternanthera,the capabiltiy to accumulate K was closely related with its growth medium,When it was grown on soils ,both the K content and K uptake rate of the plant were similar to whose of tobacco.Evident K depletion was observed in the rhizospere of all plant species,and the depletion rate was related to the capability of enrichment of plant .

  15. [Trends and spatial distribution of mortality from external causes in Salvador, Bahia State, Brazil].

    Science.gov (United States)

    de Freitas, E D; Paim, J S; da Silva, L M; Costa, M da C

    2000-01-01

    Since 1980, external causes (ICD-9 E800-E999) have been ranked as the second leading causal group for mortality in Brazil, thus becoming a major public health problem. This study aimed to describe spatial distribution trends for violent deaths in the urban setting of Salvador, a city in Northeast Brazil, for the years 1988, 1991, and 1994. An ecological study was conducted, and mortality data were obtained from death certificates and the archives of the Institute for Forensic Medicine. There was an increase of 34.6% in the number of deaths from external causes between 1988 and 1994. The highest mortality rates were among men from 20 to 29 years of age (from 192.0 to 262.0/100,000) and those 65 years and over (from 188.7 to 258.1/100,000). Homicides were the leading cause of violent deaths in about 75.0% of neighborhoods. The authors discuss the need for comprehensive public policies and an interdisciplinary approach to elucidate the causes and deal with the problem of violence. PMID:11175529

  16. Schistosomal glomerulopathy and changes in the distribution of histological patterns of glomerular diseases in Bahia, Brazil

    Directory of Open Access Journals (Sweden)

    Washington Luis Conrado dos-Santos

    2011-11-01

    Full Text Available Distinct patterns of glomerular lesions, including membranoproliferative glomerulonephritis and focal segmental glomerulosclerosis, are associated with infection by Schistosoma mansoni or Schistosoma japonicum. Evidence suggests that immune complex deposition is the main mechanism underlying the different forms of schistosomal glomerulonephritis and that immune complex deposition may be intensified by portal hypertension. The relationship between focal segmental glomerulosclerosis and schistosomiasis remains poorly understood. A clinicopathologic classification of schistosomal glomerulopathies was proposed in 1992 by the African Association of Nephrology. In Brazil, mass treatment with oral medications has led to a decrease in the occurrence of schistosomal glomerulopathy. In a survey of renal biopsies performed in Salvador, Brazil, from 2003-2009, only 24 (4% patients were identified as positive for S. mansoni infection. Among these patients, only one had the hepatosplenic form of the disease. Focal segmental glomerulosclerosis was found in seven patients and membranoproliferative glomerulonephritis was found in four patients. Although retrospective studies on the prevalence of renal diseases based on kidney biopsies may be influenced by many patient selection biases, a change in the distribution of glomerulopathies associated with nephrotic syndrome was observed along with a decline in the occurrence of severe forms of schistosomiasis.

  17. 3D elemental distribution images by XRF{mu}CT at LNLS-Brazil

    Energy Technology Data Exchange (ETDEWEB)

    Pereira, G.R.; Rocha, H.S.; Calza, C. [Nuclear Instrumentation Laboratory (LIN), COPPE, UFRJ, P.O. Box 68509, 21945-970 Rio de Janeiro (Brazil); Anjos, M.J. [Physics Institute, UERJ (Brazil); Lima, I. [Nuclear Instrumentation Laboratory (LIN), COPPE, UFRJ, P.O. Box 68509, 21945-970 Rio de Janeiro (Brazil); University Department of Mechanical Engineering and Energy, UERJ (Brazil); Perez, C.A. [Brazilian Synchrotron Light Laboratory (Brazil); Lopes, R.T., E-mail: ricardo@lin.ufrj.br [Nuclear Instrumentation Laboratory (LIN), COPPE, UFRJ, P.O. Box 68509, 21945-970 Rio de Janeiro (Brazil)

    2011-10-01

    An X-ray Transmission Microtomography (CT) system combined with an X-ray Fluorescence Microtomography (XRF{mu}CT) system was implemented in the Brazilian Synchrotron Light Laboratory (LNLS), Campinas, Brazil. The main objective of this work is to determine the elemental distribution in biological samples (breast, prostate and lung samples) in order to verify the concentration of some elements correlated with characteristics and pathology of each tissue observed by the transmission CT. The experiments were performed at the X-Ray Fluorescence beamline (D09B-XRF) of the Brazilian Synchrotron Light Laboratory, Campinas, Brazil. A quasi-monochromatic beam produced by a multilayer monochromator was used as an incident beam. The sample was placed on a high precision goniometer and translation stages that allow its rotation as well as translation perpendicular to the beam. The fluorescence photons were collected with an energy dispersive HPGe detector placed at 90{sup o} to the incident beam, while transmitted photons were detected with a fast Na(Tl) scintillation counter placed behind the sample on the beam direction. The CT images were reconstructed using a filtered back-projection algorithm and the XRF{mu}CT were reconstructed using a filtered back-projection algorithm with absorption corrections. The 3D images were reconstructed using the 3D-DOCTOR software.

  18. Spatial distribution of vehicle emission inventories in the Federal District, Brazil

    Science.gov (United States)

    Réquia, Weeberb João; Koutrakis, Petros; Roig, Henrique Llacer

    2015-07-01

    Air pollution poses an important public health risk, especially in large urban areas. Information about the spatial distribution of air pollutants can be used as a tool for developing public policies to reduce source emissions. Air pollution monitoring networks provide information about pollutant concentrations; however, they are not available in every urban area. Among the 5570 cities in Brazil, for example, only 1.7% of them have air pollution monitoring networks. In this study we assess vehicle emissions for main traffic routes of the Federal District (state of Brazil) and characterize their spatial patterns. Toward this end, we used a bottom-up method to predict emissions and to characterize their spatial patterns using Global Moran's (Spatial autocorrelation analysis) and Getis-Ord General G (High/Low cluster analysis). Our findings suggested that light duty vehicles are primarily responsible for the vehicular emissions of CO (68.9%), CH4 (93.6%), and CO2 (57.9%), whereas heavy duty vehicles are primarily responsible for the vehicular emissions of NMHC (92.9%), NOx (90.7%), and PM (97.4%). Furthermore, CO2 is the pollutant with the highest emissions, over 30 million tons/year. In the spatial autocorrelation analysis was identified cluster (p cluster only for the light vehicles.

  19. Studies on radioactivity distribution and radioactive mineral identification in uranium ores from Espinharas (PB), Brazil

    International Nuclear Information System (INIS)

    Studies about the identification of radioactive minerals in uranium bearing rocks from Espinharas (PB), Brazil are presented. Autoradiography with α-sensitive nuclear emulsions was utilized for determining radioctivity distributions and for localizing radioactive minerals, in combination with microscopy, X-ray diffractometry, PIXE and eletron microprobe analysis for its identification. Mineralized gneisse and feldspatic rock, the two principal samples studied, show distinct differences in radioactive distribution patterns, however the main carriers for U and Th seem to be the same. Microanalysis shows that elements are associated with Si, Ca, Fe and Al an some trace elements like Y, Zr, Ti, etc. U and Th are distributed uniformly in feldspatic rock and inhomogeneously in mineralized gneisse, indicating that the zonary structure of the radioactive cristals, frequently observed in gneisse, could be due to variable U:Th ratios. Chemical analysis, X-ray diffraction datas and microscopic studies indicates that the principal carrier for radioactivity in the rocks of Espinharas is a silicate mineral of U and Th, probably situaded in the series of transition: Coffinite -> uraninite, thorogummite -> thorianite. Some additional experiments about leachability of uranium with diluted sulfuric acid are reported, which confirm the different nature of radioactivity distribution in feldspatic and gneissic rocks. (author)

  20. Spatial distribution of tropical wetlands in Central Brazil as influenced by geological and geomorphological settings

    Science.gov (United States)

    De-Campos, Alfredo Borges; de Cedro, Diego Antônio Botelho; Tejerina-Garro, Francisco Leonardo; Bayer, Maximiliano; Carneiro, Gabriel Tenaglia

    2013-10-01

    Tropical wetlands in Central Brazil are located in savanna areas and are made up of more terrestrial-type wetlands - campo limpo úmido (grassland-type savanna), campo sujo úmido (shrub-type savanna), mata galeria (riverine forest); as well as more aquatic-type wetlands - vereda (valley-side marsh with palm groves of Mauritia flexuosa), várzea (backswamp), lake, and river. They are regulated by a seasonal climatic regime characterized by a wet-rainy season from October to March and then followed by a dry season. Underground water is abundant and rivers frequently overflow during the rainy season. Many of these wetlands which are protected by law are significant regulators of water quality. In order to predict tropical wetland function and draw up environmental management policies, it is important to understand how abiotic and biotic factors influence tropical wetland origin and spatial distribution. In this large-scale study we set out to investigate the influence that geological and geormorphological settings, i.e. geological substrates and geomorphological units, have on the spatial distribution of tropical wetlands in Central Brazil. Two watersheds, the Caiapó and Piracanjuba, were selected in order to carry out the study. They present different types of rock and unconsolidated surface materials. Planation surface, escarpment and steep slope, gentle slope, and aggradation are the dominant geomorphological units in the watersheds. Principal component analysis was conducted in order to determine the influence of the selected abiotic variables on the spatial distribution of tropical wetlands. The study showed that the presence of sedimentary and low-grade metamorphic rocks and planation surface strongly influence the spatial distribution of the more terrestrial-type wetlands. Geological and geomorphological settings explain about 60% of the variability in the spatial distribution of these wetland types. No clear effect of the abiotic variables selected was

  1. A Unique Pattern of HCV Genotype Distribution on Hainan Island in China Revealed by Evolutionary Analysis

    Directory of Open Access Journals (Sweden)

    Tao Wu

    2016-06-01

    Full Text Available Background/Aims: Different genotypes of HCV may differ in both disease progression and response to antiviral therapies. Hainan Island has been inhabited by the “Li” aboriginal minority for centuries. We aimed to provide a better understanding of HCV infection on Hainan Island, so that the information would help improve strategies for HCV prevention and control on the island and in the wider country. Methods: Using RT-PCR and DNA sequencing, we determined HCV sequences from 100 patients living on Hainan Island. Results: Phylogenetic analysis classified these sequences into six subtypes: 6a (n=35, 1b (n=31, 3b (n=16, 2a (n=8, 3a (n=6, and 1a (n=4. By including reference sequences reported from elsewhere in China, phylogeographic trees were reconstructed to indicate their migration patterns. While the predominant 6a isolates were estimated to have origins in Guangdong and Guangxi provinces, the increase in 3b strains must have resulted from IDU network transmission from the southwest. A Bayesian Skyline Plot for subtype 1a, which is rare in China, showed a rapid population growth since 1998. Although slowed in rate around 2005, this growth continued to the present. Not found for any other HCV lineage. Conclusions: Overall, a delayed growth pattern may indicate the unique history of 1a dissemination in China and its recently increasing prevalence, despite measures taken to improve HCV prevention.

  2. Spontaneous viral clearance, viral load, and genotype distribution of hepatitis C virus (HCV) in HIV-infected patients with anti-HCV antibodies in Europe

    DEFF Research Database (Denmark)

    Soriano, Vincent; Mocroft, Amanda; Rockstroh, Juergen;

    2008-01-01

    , respectively. A greater HCV RNA level was associated with a greater chance of being infected with HCV genotype 1 (aOR, 1.60 per 1 log higher [95% CI, 1.36-1.88]). CONCLUSIONS: More than three-quarters of the HIV- and HCV Ab-positive patients in EuroSIDA showed active HCV replication. Viremia was more frequent......BACKGROUND: Variables influencing serum hepatitis C virus (HCV) RNA levels and genotype distribution in individuals with human immunodeficiency virus (HIV) infection are not well known, nor are factors determining spontaneous clearance after exposure to HCV in this population. METHODS: All HCV...... antibody (Ab)-positive patients with HIV infection in the EuroSIDA cohort who had stored samples were tested for serum HCV RNA, and HCV genotyping was done for subjects with viremia. Logistic regression was used to identify variables associated with spontaneous HCV clearance and HCV genotype 1. RESULTS: Of...

  3. Genotype distribution of human papillomavirus (HPV and co-infections in cervical cytologic specimens from two outpatient gynecological clinics in a region of southeast Spain

    Directory of Open Access Journals (Sweden)

    Egea-Cortines Marcos

    2009-08-01

    Full Text Available Abstract Background Human Papillomavirus (HPV genotype distribution and co-infection occurrence was studied in cervical cytologic specimens from Murcia Region, (southeast Spain, to obtain information regarding the possible effect of the ongoing vaccination campaign against HPV16 and HPV18. Methods A total of 458 cytologic specimens were obtained from two outpatient gynecological clinics. These included 288 normal benign (N/B specimens, 56 atypical squamous cell of undetermined significance (ASC-US, 75 low-grade squamous intraepithelial lesions (LSIL and 39 high-grade squamous intraepithelial lesions (HSIL. HPV genotyping was performed using PCR and tube array hybridization. Results The most frequent genotype found was HPV16 (14.9% in N/B; 17.9% in ASC-US; 29.3% in LSIL and 33.3% HSIL. Distribution of other genotypes was heavily dependent on the cytologic diagnoses. Co-infections were found in 15.3% of N/B, 10.7% of ASC-US, 48% of LSIL and 25.6% of HSIL cases (significantly different at p Conclusion HPV vaccination might prevent 34.6% and 35.8% of LSIL and HSIL, respectively. Co-infection rate is dependent on both cytologic diagnosis and HPV genotype. Moreover, genotypes belonging to A5, A7 and A9 species are more often found as co-infections than genotype pertaining to A6 species. This suggests that phylogenetically related genotypes might have in common similar grades of dependency for cervical epithelium colonization.

  4. Anal Human Papillomavirus Genotype Distribution in HIV-Infected Men Who Have Sex with Men by Geographical Origin, Age, and Cytological Status in a Spanish Cohort

    OpenAIRE

    Torres, Montserrat; González, Cristina; del Romero, Jorge; Viciana, Pompeyo; Ocampo, Antonio; Rodríguez-Fortúnez, Patricia; Masiá, Mar; Blanco, José Ramón; Portilla, Joaquín; Rodríguez, Carmen; Hernández-Novoa, Beatriz; del Amo, Julia; Ortiz, Marta

    2013-01-01

    Knowledge of human papillomavirus (HPV) type distribution in populations at risk for anal cancer is needed. Here, we describe the anal HPV genotype distribution in a large Spanish cohort (Cohort of the Spanish HIV Research Network HPV [CoRIS-HPV]) of HIV-positive men who have sex with men (MSM) according to geographical origin, age, and cytological status. A cross-sectional analysis of baseline data from 1,439 HIV-infected MSM (2007 to 2012) was performed. Anal HPV genotyping was performed us...

  5. Genotype Distribution and Molecular Epidemiology of Hepatitis C Virus in Hubei, Central China.

    Directory of Open Access Journals (Sweden)

    Jing Peng

    Full Text Available Little is known about the molecular epidemiology of hepatitis C virus (HCV infection in Central China.A total of 570 patients from Hubei Province in central China were enrolled. These patients were tested positive for HCV antibody prior to blood transfusion. Among them, 177 were characterized by partial NS5B and/or Core-E1 sequences and classified into five subtypes: 1b, 83.0% (147/177; 2a, 13.0% (23/177; 3b, 2.3% (4/177; 6a, 1.1% (2/177; 3a, 0.6% (1/177. Analysis of genotype-associated risk factors revealed that paid blood donation and transfusion before 1997 were strongly associated with subtypes 1b and 2a, while some subtype 2a cases were also found in individuals with high risk sexual behaviors; subtypes 3b, 6a, and 3a were detected only in intravenous drug users. Phylogeographic analyses based on the coalescent datasets demonstrated that 1b, 2a, 3b, and 6a were locally epidemic in Hubei Province. Among them, subtype 1b Hubei strains may have served as the origins of this subtype in China, and 2a and 3b Hubei strains may have descended from the northwest and southwest of China, respectively, while 6a Hubei strains may have been imported from the central south and southwest.The results suggest that the migration patterns of HCV in Hubei are complex and variable among different subtypes. Implementation of mandatory HCV screening before donation has significantly decreased the incidence of transfusion-associated HCV infection since 1997. More attention should be paid to intravenous drug use and unsafe sexual contact, which may have become new risk factors for HCV infection in Hubei Province.

  6. Evidence for the Gompertz curve in the income distribution of Brazil 1978-2005

    Science.gov (United States)

    Moura, N. J., Jr.; Ribeiro, M. B.

    2009-01-01

    This work presents an empirical study of the evolution of the personal income distribution in Brazil. Yearly samples available from 1978 to 2005 were studied and evidence was found that the complementary cumulative distribution of personal income for 99% of the economically less favorable population is well represented by a Gompertz curve of the form G(x) = exp [exp (A-Bx)], where x is the normalized individual income. The complementary cumulative distribution of the remaining 1% richest part of the population is well represented by a Pareto power law distribution P(x) = βx-α. This result means that similarly to other countries, Brazil’s income distribution is characterized by a well defined two class system. The parameters A, B, α, β were determined by a mixture of boundary conditions, normalization and fitting methods for every year in the time span of this study. Since the Gompertz curve is characteristic of growth models, its presence here suggests that these patterns in income distribution could be a consequence of the growth dynamics of the underlying economic system. In addition, we found out that the percentage share of both the Gompertzian and Paretian components relative to the total income shows an approximate cycling pattern with periods of about 4 years and whose maximum and minimum peaks in each component alternate at about every 2 years. This finding suggests that the growth dynamics of Brazil’s economic system might possibly follow a Goodwin-type class model dynamics based on the application of the Lotka-Volterra equation to economic growth and cycle.

  7. Distribution of AdeABC efflux system genes in genotypically diverse strains of clinical Acinetobacter baumannii.

    Science.gov (United States)

    Wieczorek, Piotr; Sacha, Paweł; Czaban, Sławomir; Hauschild, Tomasz; Ojdana, Dominika; Kowalczuk, Oksana; Milewski, Robert; Poniatowski, Bogusław; Nikliński, Jacek; Tryniszewska, Elżbieta

    2013-10-01

    Acinetobacter baumannii has emerged as a highly problematic hospital-associated pathogen. Different mechanisms contribute to the formation of multidrug resistance in A. baumannii, including the AdeABC efflux system. Distribution of the structural and regulatory genes encoding the AdeABC efflux system among genetically diverse clinical A. baumannii strains was achieved by using PCR and pulsed-field gel electrophoresis techniques. The distribution of adeABRS genes is extremely high among our A. baumannii strains, except the adeC gene. We have observed a large proportion of strains presenting multidrug-resistance phenotype for several years. The efflux pump could be an important mechanism in these strains in resistance to antibiotics. PMID:23886790

  8. Spatial distribution of Legionella pneumophila MLVA-genotypes in a drinking water system.

    OpenAIRE

    Rodríguez-Martínez, Sarah; Sharaby, Yehonatan; Pecellín, Marina; Brettar, Ingrid; Höfle, Manfred; Halpern, Malka

    2015-01-01

    Bacteria of the genus Legionella cause water-based infections, resulting in severe pneumonia. To improve our knowledge about Legionella spp. ecology, its prevalence and its relationships with environmental factors were studied. Seasonal samples were taken from both water and biofilm at seven sampling points of a small drinking water distribution system in Israel. Representative isolates were obtained from each sample and identified to the species level. Legionella pneumophila was further dete...

  9. Molecular investigation of zoonotic genotypes of Giardia intestinalis isolates in humans, dogs and cats, sheep, goats and cattle in Araçatuba (São Paulo State, Brazil by the analysis of ß-giardin gene fragments

    Directory of Open Access Journals (Sweden)

    Elenir Alves Macedo de Godoy

    2013-10-01

    Full Text Available In the period from July 2009 to October 2010, fecal samples from 61 animals and 154 humans from the municipality of Aracatuba (São Paulo State, Brazil were studied. Fecal samples from animals were collected in the Municipal Animal Shelter and the Veterinary Hospital of the Universidade Estadual Paulista. Human fecal specimens were collected in playschools in the outskirts of the city by the private network of clinical analysis laboratories of the municipal. Diagnosis was done by optical microscopy using the Faust and Hoffmann, Pons and Janer techniques. The genotypes of Giardia intestinalis were characterized by PCR-RFLP and confirmed by sequencing the ß-giardin gene. Human specimens were positive in 25.3% (39/154 of the cases with 26.8% (36/134 of the specimens from children and 15% (3/20 from adults being positive. The frequency of G. intestinalis among the animals was 23.0% (14/61. A total of 32 isolates of G. intestinalis obtained from human feces and six from dogs and cats were characteristic of the A genotype (AI and AII/AIII. The results of this study in respect to frequency of giardiasis are similar to reported in most studies in Brazil. The prevalence observed in animal populations conforms to worldwide infection rates. G. intestinalis genotypes considered zoonotic were detected in both pets and humans from the city of Aractuba, suggesting a possible zoonotic transmission of the parasite in the northwestern region of São Paulo State. The absence of these genotypes in farm animals may imply that they are not involved in the chain of transmission to humans in this region.

  10. Spatial distribution and socioeconomic context of tuberculosis in Rio de Janeiro, Brazil

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    Alessandra Gonçalves Lisbôa Pereira

    2015-01-01

    Full Text Available OBJECTIVE To analyze the spatial distribution of risk for tuberculosis and its socioeconomic determinants in the city of Rio de Janeiro, Brazil.METHODS An ecological study on the association between the mean incidence rate of tuberculosis from 2004 to 2006 and socioeconomic indicators of the Censo Demográfico (Demographic Census of 2000. The unit of analysis was the home district registered in the Sistema de Informação de Agravos de Notificação (Notifiable Diseases Information System of Rio de Janeiro, Southeastern Brazil. The rates were standardized by sex and age group, and smoothed by the empirical Bayes method. Spatial autocorrelation was evaluated by Moran’s I. Multiple linear regression models were studied and the appropriateness of incorporating the spatial component in modeling was evaluated.RESULTS We observed a higher risk of the disease in some neighborhoods of the port and north regions, as well as a high incidence in the slums of Rocinha and Vidigal, in the south region, and Cidade de Deus, in the west. The final model identified a positive association for the variables: percentage of permanent private households in which the head of the house earns three to five minimum wages; percentage of individual residents in the neighborhood; and percentage of people living in homes with more than two people per bedroom.CONCLUSIONS The spatial analysis identified areas of risk of tuberculosis incidence in the neighborhoods of the city of Rio de Janeiro and also found spatial dependence for the incidence of tuberculosis and some socioeconomic variables. However, the inclusion of the space component in the final model was not required during the modeling process.

  11. Geographic Distribution of Chagas Disease Vectors in Brazil Based on Ecological Niche Modeling

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    Rodrigo Gurgel-Gonçalves

    2012-01-01

    Full Text Available Although Brazil was declared free from Chagas disease transmission by the domestic vector Triatoma infestans, human acute cases are still being registered based on transmission by native triatomine species. For a better understanding of transmission risk, the geographic distribution of Brazilian triatomines was analyzed. Sixteen out of 62 Brazilian species that both occur in >20 municipalities and present synanthropic tendencies were modeled based on their ecological niches. Panstrongylus geniculatus and P. megistus showed broad ecological ranges, but most of the species sort out by the biome in which they are distributed: Rhodnius pictipes and R. robustus in the Amazon; R. neglectus, Triatoma sordida, and T. costalimai in the Cerrado; R. nasutus, P. lutzi, T. brasiliensis, T. pseudomaculata, T. melanocephala, and T. petrocchiae in the Caatinga; T. rubrovaria in the southern pampas; T. tibiamaculata and T. vitticeps in the Atlantic Forest. Although most occurrences were recorded in open areas (Cerrado and Caatinga, our results show that all environmental conditions in the country are favorable to one or more of the species analyzed, such that almost nowhere is Chagas transmission risk negligible.

  12. The effects of non-agricultural activities on income distribution in rural Brazil

    Directory of Open Access Journals (Sweden)

    Henrique D. Neder

    2003-06-01

    Full Text Available The growth of non-agricultural activity since the 1980s has reconfigured the economic and social dynamic in Brazil’s rural areas. Our paper intends to describe the impact of this growth on income distribution in rural Brazil. We made use of a method of decomposition of two indicators of income distribution applied to1992 and 1999 Brazilian National Household Sample Survey (PNAD data: the variation coefficient and the Gini index. It was observed that non-agricultural activities have increased the concentration of rural income and that this phenomenon is more prominent in Region I (states of Brazil’s Northeast and the state of Tocantins and Region IV (states of São Paulo and Mato Grosso do Sul and the Distrito Federal. It was found that the income concentrating effect of each non-agricultural activity branch (commerce, transformation industry, administration, service differed by region. In Region I, income from the "Social/Public Administration and Other Activities branch " (a PNAD designation presents a coefficient of relative concentration greater than a unit, which indicates that income from this activities branch acts to increase the concentration of non-agricultural income in this region. In Region IV, income from industrial activities and from Social/ Public Administration and Other Activities both present coefficients of relative concentration greater than a unit; therefore, both branches act to increase the concentration of income from non-agricultural activities in this region.

  13. Comparison of spatial interpolation methods for the estimation of precipitation distribution in Distrito Federal, Brazil

    Science.gov (United States)

    Borges, Pablo de Amorim; Franke, Johannes; da Anunciação, Yumiko Marina Tanaka; Weiss, Holger; Bernhofer, Christian

    2016-01-01

    Available climatological information of Distrito Federal does not satisfy the requirements for detailed climate diagnosis, as they do not provide the necessary spatial resolution for water resources management purposes. Annual and seasonal climatology (1971-2000) of precipitation from 6 meteorological stations and 54 rain gauges from Central Brazil were used to test eight different spatial interpolation methods. Geographical factors (i.e., altitude, longitude and latitude) explain a large portion of precipitation in the region, and therefore, multivariate models were included. The performance of estimations was assessed through independent validation using mean square error, correlation coefficient and Nash-Sutcliffe efficiency criterion. Inverse distance weighting (IDW), ordinary kriging (OK) and the multivariate regression with interpolation of residuals by IDW (MRegIDW) and OK (MRegOK) have performed the lowest errors and the highest correlation and Nash-Sutcliffe efficiency criterion. In general, interpolation methods provide similar spatial distributions of rainfall wherever observation network is dense. However, the inclusion of geographical variables to the interpolation method should improve estimates in areas where the observation network density is low. Nevertheless, the assessment of uncertainties using a geostatistical method provides supplementary and qualitative information which should be considered when interpreting the spatial distribution of rainfall.

  14. The Impact of Global Climate Change on the Geographic Distribution and Sustainable Harvest of Hancornia speciosa Gomes (Apocynaceae) in Brazil

    Science.gov (United States)

    Nabout, João Carlos; Magalhães, Mara Rúbia; de Amorim Gomes, Marcos Aurélio; da Cunha, Hélida Ferreira

    2016-04-01

    The global Climate change may affect biodiversity and the functioning of ecosystems by changing the appropriate locations for the development and establishment of the species. The Hancornia speciosa, popularly called Mangaba, is a plant species that has potential commercial value and contributes to rural economic activities in Brazil. The aim of this study was to evaluate the impact of global climate change on the potential geographic distribution, productivity, and value of production of H. speciosa in Brazil. We used MaxEnt to estimate the potential geographic distribution of the species in current and future (2050) climate scenarios. We obtained the productivity and value of production for 74 municipalities in Brazil. Moreover, to explain the variation the productivity and value of production, we constructed 15 models based on four variables: two ecological (ecological niche model and the presence of Unity of conservation) and two socio-economic (gross domestic product and human developed index). The models were selected using Akaike Information Criteria. Our results suggest that municipalities currently harvesting H. speciosa will have lower harvest rates in the future (mainly in northeastern Brazil). The best model to explain the productivity was ecological niche model; thus, municipalities with higher productivity are inserted in regions with higher environmental suitability (indicated by niche model). Thus, in the future, the municipalities harvesting H. speciosa will produce less because there will be less suitable habitat for H. speciosa, which in turn will affect the H. speciosa harvest and the local economy.

  15. Pisces, Cyprinodontiformes, Rivulidae,Austrolebias periodicus (Costa, 1999): Distribution extension in state of Rio Grande do Sul, southern Brazil

    OpenAIRE

    Volcan, M. V.; Lanés, L. E. K.; Gonçalves, A. C.

    2010-01-01

    The present note extends the distribution of annual killifish Austrolebias periodicus, a endangered species,endemic of the Pampas region, in Ibicuí River basin, state of Rio Grande do Sul, southern Brazil. This information is neededto develop conservation strategies for this species and its habitat, which are at high risk due to the expansion of riceproduction and exotic forests in southern Brazil.

  16. Distribution of human papillomavirus genotypes in women with cervical alterations from north Argentina

    Directory of Open Access Journals (Sweden)

    G D Deluca

    2013-01-01

    Full Text Available Background: Cervical cancer remains a major public health problem in northern Argentina, showing the highest mortality rate in the country (approximately 22 cases/100000 women. Objective: The aim of this study was to provide epidemiological data on the prevalence and type distribution of human papillomavirus (HPV in women with pre-neoplastic lesions before the massive introduction of HPV vaccination in the country. Materials and Methods: Exfoliated cervical cells were collected to screen for HPV using the widely known MY09/11 PCR, followed by the restriction fragment-length polymorphism (RFLP technique from a total of 714 women with previously diagnosed atypical squamous cells of undetermined significance (ASCUS, low-grade squamous intraepithelial lesion (LG-SIL and high-grade squamous intraepithelial lesion (HG-SIL. Results: Overall HPV prevalence was 48.2% in ASCUS (24 different HPV types detected, 66.5% in LG-SIL (37 HPV types detected and 82.6% in HG-SIL (16 HPV types detected. HPV-16 was the most prevalent type among all cases. With respect to multiple HPV infections, 9.6% were observed in ASCUS, 14.3% in LG-SIL and 11.4% in HG-SIL. Conclusion: The major strength of our study is the assessment of a large series of women with cytological alterations in this region. The information attained will be useful as a regional baseline for future epidemiological vigilance, in the context of the national HPV vaccination program.

  17. High-risk human papilloma virus genotypes in cervical carcinoma of Serbian women: Distribution and association with pathohistological findings.

    Science.gov (United States)

    Stamenković, Miodrag; Knežević, Aleksandra; Knežević, Ivana; Kuzmanović, Igor; Karalić, Danijela; Milenković, Sanja; Jovanović, Tanja

    2016-09-01

    A significant role of high-risk Human papilloma viruses (HR HPV) in the development of cervical carcinoma is well known. HR HPV 16 and 18 account for approximately 70% of all cases of cervical cancer worldwide. The incidence of cervical cancer in Serbia, is one of the highest in Europe. The aim of our study was to investigate the distribution of HR HPV types in cervical carcinoma of Serbian women, as well as association between the HPV types and pathohistological findings. The study included 80 archival cervical cancer tissues from the same number of patients. The presence of HPV DNA was determined using MY09/MY11 primers for L1 gene and GP1/GP2 primers for E1 gene. HPV was detected in 78.75% tissues. HR HPV genotypes found in the decreasing order of frequency were: HPV16 (80.39%), HPV33 (7.84%), HPV58 (5.88%), HPV18 (1.96%), HPV45 (1.96%) and HPV53 (1.96%). The examined tissues were 91.25% squamous cell carcinomas and 8.75% adenocarcinoma. The high frequency of HPV 16 was observed in both types of carcinoma (80.8% and 75%, respectively) while the prevalence of HPV18 was low. These results may contribute to the implementation of cervical carcinoma prevention program in Serbia, including the selection of the most appropriate vaccine and immunization program. PMID:27461126

  18. Spatial distribution of metals in soil samples from Zona da Mata, Pernambuco, Brazil using XRF technique

    International Nuclear Information System (INIS)

    Soil contamination is today one of the most important environmental issues for society. In the past, soil pollution was not considered as important as air and water contamination, because this was more difficult to be controlled, becoming an important topic in studies of environmental protection worldwide. Based on this, this paper provides information on the determination of metals in soil samples collected in Zona da Mata, Pernambuco, Brazil, where normally the application of pesticides, insecticides and other agricultural additives are used in a disorderly manner and without control. A total of 24 sampling points were monitored. The analysis of Mn, Fe, Ni, Zn, Br, Rb, Sr, Pb, Ti, La, Al, Si and P were performed using Energy Dispersive X-Ray Fluorescence. In order to assess the development of analytical method, inorganic Certified Reference Materials (IAEA-SOIL-7 and SRM 2709) were analyzed. In each sampling site, the geoaccumulation index were calculated to estimate the level of metal contamination in the soil, this was made taking into account the resolution 460 of the National Environmental Council (CONAMA in Portuguese). The elemental distribution patterns obtained for each metal were associated with different pollution sources. This assessment provides an initial description of pollution levels presented by metals in soils from several areas of Zona da Mata, providing quantitative evidence and demonstrating the need to improve the regulation of agricultural and industrial activities. (author)

  19. Prevalence and geospatial distribution of bovine cysticercosis in the state of Mato Grosso, Brazil.

    Science.gov (United States)

    Rossi, Gabriel Augusto Marques; de Simoni, Heloisa Adélia Stefanoni; Lopes, Welber Daniel Zanetti; Almeida, Henrique Meiroz de Souza; Soares, Vando Edésio; Vidal, Ana Maria Centola; Ferraudo, Antonio Sergio; Mathias, Luis Antonio

    2016-08-01

    This study focused on estimating the prevalence and evaluating the geospatial distribution of bovine cysticercosis in the state of Mato Grosso, Brazil. To this, we used data of 6,200,497 animals slaughtered during the years of 2013 and 2014, and from 141 municipalities of the state. The prevalence observed for this period was 0.0873% (95% CI 0.0851-0.0897). Regarding the cysticerci detected, the calcified ones were the most frequent (74.43%). The high odds ratios were observed in animals reared in the Administrative Regions of Sinop, Barra do Garças, Água Boa, Cáceres, Barra do Bugres, Cuiabá, Pontes Lacerda, Rondonópolis, Matupa, São Félix do Araguaia and Lucas do Rio Verde, respectively. Furthermore, the results indicate the existence of a relation between the areas with high cysticercosis prevalence and human population density. We highlight the need of the development of a risk model based on the origin to improve cysticercosis detection in endemic areas. PMID:27435651

  20. Distribution of radionuclides in the sediments of Cananeia-Iguape Estuarine Complex (SP, Brazil)

    Energy Technology Data Exchange (ETDEWEB)

    Ribeiro, Andreza P.; Ferreira, Paulo A.L.; Mahiques, Michel M., E-mail: andrezpr@usp.br, E-mail: paulo.alves.ferreira@usp.br, E-mail: mahiques@usp.br, E-mail: rfigueira@usp.br [Universidade de Sao Paulo (IO/USP), Sao Paulo, SP (Brazil). Instituto Oceanografico; Franca, Elvis J.; Figueira, Rubens C.L., E-mail: ejfranca@cnen.gov.br [Centro Regional de Ciencias Nucleares do Nordeste (CRCN-NE/CNEN-PE), Recife, PE (Brazil)

    2013-07-01

    With the advent of techniques that enabled the detection of radioactivity, a new frontier was opened in the many areas of Earth sciences, as the radionuclides can be used as tracers for processes of physical, chemical and biological natures. In this context, natural ({sup 40}K, {sup 232}Th and {sup 238}U) and artificial ({sup 137}Cs) radionuclides were measured through the means of high-resolution gamma spectrometry, a non-destructive technique, in the Cananeia-Iguape Estuarine Complex (Sao Paulo, Brazil). The activities obtained are 107.61 - 573.84 Bq kg{sup -1} for {sup 40}K, 11.11 - 73.65 Bq kg{sup -1} for {sup 232}Th, 2.27 - 60.76 Bq kg{sup -1} for {sup 238}U, and 0.23 - 3.49 Bq kg{sup -1} for {sup 137}Cs, with {sup 137}Cs content within the observed range for samples environmentally affected only by the fallout of past nuclear tests. Also, these radionuclides presented a significant (α = 0.05) correlation with grain size distribution and organic carbon content as well. (author)

  1. Distribution of radionuclides in the sediments of Cananeia-Iguape Estuarine Complex (SP, Brazil)

    International Nuclear Information System (INIS)

    With the advent of techniques that enabled the detection of radioactivity, a new frontier was opened in the many areas of Earth sciences, as the radionuclides can be used as tracers for processes of physical, chemical and biological natures. In this context, natural (40K, 232Th and 238U) and artificial (137Cs) radionuclides were measured through the means of high-resolution gamma spectrometry, a non-destructive technique, in the Cananeia-Iguape Estuarine Complex (Sao Paulo, Brazil). The activities obtained are 107.61 - 573.84 Bq kg-1 for 40K, 11.11 - 73.65 Bq kg-1 for 232Th, 2.27 - 60.76 Bq kg-1 for 238U, and 0.23 - 3.49 Bq kg-1 for 137Cs, with 137Cs content within the observed range for samples environmentally affected only by the fallout of past nuclear tests. Also, these radionuclides presented a significant (α = 0.05) correlation with grain size distribution and organic carbon content as well. (author)

  2. Distribution of heavy metals in sediments of a tropical reservoir in Brazil: Sources and fate

    Science.gov (United States)

    Souza, Vinícius A.; Wasserman, Julio C.

    2015-11-01

    Juturnaíba Lake has been utilized for the captation of water to supply over one million people in the Lakes Region, Rio de Janeiro, Brazil. The water treatment plant sludges have been directly disposed in the margins of the lake, constituting a potential threat for the water quality. The aim of the present work was to evaluate the geochemical processes that control concentrations and mobility of metals (Al, Cu, Fe, Mn, Pb and Zn) in the sediments of the Juturnaíba Reservoir, and whether they are affected by the disposal of the water treatment sludges. Sediment samples were collected from thirty-two stations in the Juturnaíba lake, and the total concentration of metals (pseudo-total concentrations), granulometry, total organic carbon, total nitrogen and total phosphorus concentrations were evaluated. Distribution maps and attenuation models were constructed. The results show that the metals concentrations are affected by the presence of large stands of the aquatic macrophyte Egeria sp. (Hydrocharitaceae). The sludges from the water treatment plants do not seem to contribute to the contamination of the sediments, probably because the mobility of the contaminants in the dumping piles is low.

  3. Seasonal Variation and Frequency Distribution of Ectoparasites in Crossbreed Cattle in Southeastern Brazil

    Directory of Open Access Journals (Sweden)

    Maria do Socorro Ferraz da Costa

    2014-01-01

    Full Text Available The aims of this study were to evaluate the seasonal variation and frequency distribution of Rhipicephalus (Boophilus microplus, Haematobia irritans, and Dermatobia hominis on crossbred heifers under field conditions in the northeast of Minas Gerais state, southeastern Brazil. From November 2007 to September 2009 (23 months, 40 heifers aged 16.6±2.4 months were divided into groups A (1/4 Holstein × 3/4 Gir and B (1/2 Holstein × 1/2 Gir and had the monthly infestation estimated along with the climatic conditions. The mean maximum and minimum temperatures were 28.5 and 19°C, respectively. The ectoparasites were present on animals in all months of the year. The levels of ticks on the animals were low (3.0±0.2 ticks/animal, with the highest density in midwinter. The temperature was the climatic factor that most influenced the tick levels. The population of H. irritans (13.9±0.3 flies/animal and D. hominis (1.5±0.2 larvae/animal on heifers was more influenced by rainfall and exhibited two population peaks during the year. 1/2 Holstein heifers harbored significantly more H. irritans and D. hominis than 1/4 Holstein heifers. The results are discussed considering the most appropriate periods to apply ectoparasiticides and the genetic make-up of the animals.

  4. Natural radionuclides distribution in the shelf and upper slope of southeast Brazil

    Energy Technology Data Exchange (ETDEWEB)

    Cordero, Luisa M.; Figueira, Rubens C.L., E-mail: luisa.cordero@usp.b, E-mail: rfigueira@usp.b [Universidade de Sao Paulo (USP), SP (Brazil). Inst. Oceanografico. Lab. de Quimica Inorganica Marinha; Mahiques, Michel M., E-mail: mahiques@usp.b [Universidade de Sao Paulo (USP), SP (Brazil). Inst. Oceanografico. Lab. de Analise de Materia Organica; Tessler, Moyses G., E-mail: mgtessle@usp.b [Universidade de Sao Paulo (USP), SP (Brazil). Inst. Oceanografico. Lab. de Espectrometria Gama

    2009-07-01

    In recent decades, Oceanography has been using a variety of radionuclides as tracers to understand the ocean dynamic processes, handling and disposal of sediments of seabed. In this context, the determination of natural radionuclides distributions ({sup 238}U, {sup 232}Th and {sup 40}K) has been carried out with sediments samples from the shelf and upper slope off Southeast Brazil using a gamma spectrometry technique. The samples were sliced into strata of 2 cm, dried, ground and properly packed to be analysed. The concentration of activities was performed in a hyperpure Ge detector with a resolution of 1,9 keV for the peak of 1332,3 keV of {sup 60}Co, model GEM50P by EGG and ORTEC. The study area is located between latitudes 28 deg 40'S and 23 deg 00'S and extends from Cabo Frio (RJ) to Cabo de Santa Marta Grande (SC). The activity concentrations varied from 0,6 to 52,8 BqKg{sup -1} for {sup 238}U, from 1,6 to 50,9BqKg{sup -1} for {sup 232}Th and from 65,4 to 873,3 BqKg{sup -1} for {sup 40}K. From these results it is possible to establish a correlation between the depositional area dynamics and the samples size parameters. (author)

  5. Spatial distribution of trace elements in topsoils adjacent to main avenues of Sao Paulo city, Brazil

    International Nuclear Information System (INIS)

    In the present study, the concentration and distribution of Ba, Cu, Mo, Pb, S, Zn and Zr in soils collected along two main avenues (Pinheiros River Highway and Tiete River Highway) with high traffic density in the metropolitan region of Sao Paulo, Brazil, are presented, and their possible sources are discussed. These elements are strongly considered as contaminants originated from vehicular emissions. The analytical technique employed was XRF. The data set was evaluated by a t test for independent samples (group: avenues) at a 0.05 significance level. According to t test, the average contents obtained from Pinheiros River Highways are significantly different than the Tiete River, except for Mo. Multivariate statistic approaches (Pearson Correlation, Cluster and Factorial Analysis - FA) were adopted for data treatment. FA identified two main factors which accounted for about 86% of the total variance. The behavior of Ba, Cu, Pb, S and Zn were explained by the Factor 1. This indicates that the elements may have similar sources, probably related to gas emissions escaping from the vehicle fuel system. Factor 2 included Mo and Zr, suggesting their origin in the sample soils may be associated with the deterioration process of some device in the vehicular engine system or may be associated with the chemical composition of the urban soil analyzed. (author)

  6. Spatial distribution of metals in soil samples from Zona da Mata, Pernambuco, Brazil using XRF technique

    Energy Technology Data Exchange (ETDEWEB)

    Fernandez, Zahily Herrero; Santos Junior, Jose Araujo dos; Amaral, Romilton dos Santos; Menezes, Romulo Simoes Cezar; Santos, Josineide Marques do Nascimento; Bezerra, Jairo Dias; Damascena, Kennedy Francys Rodrigues, E-mail: zahily1985@gmail.com, E-mail: jaraujo@ufpe.br, E-mail: romilton@ufpe.br, E-mail: rmenezes@ufpe.br, E-mail: neideden@hotmail.com, E-mail: jairo.dias@ufpe.br, E-mail: kennedy.eng.ambiental@gmail.com [Universidade Federal de Pernambuco (UFPE), Recife, PE (Brazil). Centro de Tecnologia e Geociencias. Departamento de Energia Nuclear; Alvarez, Juan Reinaldo Estevez, E-mail: jestevez@ceaden.cu [Centro de Aplicaciones Tecnologicas y Desarrollo Nuclear (CEADEN), Havana (Cuba); Silva, Edvane Borges da, E-mail: edvane.borges@pq.cnpq.br [Universidade Federal de Pernambuco (UFPE), Vitoria de Santo Antao, PE (Brazil). Nucleo de Biologia; Franca, Elvis Joacir de; Farias, Emerson Emiliano Gualberto de, E-mail: ejfranca@cnen.gov.br, E-mail: emersonemiliano@yahoo.com.br [Centro Regional de Ciencias Nucleares do Nordeste (CRCN-NE/CNEN-PE), Recife, PE (Brazil); Silva, Alberto Antonio da, E-mail: alberto.silva@barreiros.ifpe.edu.br [Instituto Federal de Educacao, Ciencia e Tecnologia de Pernambuco (IFPE), Barreiros, PE (Brazil)

    2015-07-01

    Soil contamination is today one of the most important environmental issues for society. In the past, soil pollution was not considered as important as air and water contamination, because this was more difficult to be controlled, becoming an important topic in studies of environmental protection worldwide. Based on this, this paper provides information on the determination of metals in soil samples collected in Zona da Mata, Pernambuco, Brazil, where normally the application of pesticides, insecticides and other agricultural additives are used in a disorderly manner and without control. A total of 24 sampling points were monitored. The analysis of Mn, Fe, Ni, Zn, Br, Rb, Sr, Pb, Ti, La, Al, Si and P were performed using Energy Dispersive X-Ray Fluorescence. In order to assess the development of analytical method, inorganic Certified Reference Materials (IAEA-SOIL-7 and SRM 2709) were analyzed. In each sampling site, the geoaccumulation index were calculated to estimate the level of metal contamination in the soil, this was made taking into account the resolution 460 of the National Environmental Council (CONAMA in Portuguese). The elemental distribution patterns obtained for each metal were associated with different pollution sources. This assessment provides an initial description of pollution levels presented by metals in soils from several areas of Zona da Mata, providing quantitative evidence and demonstrating the need to improve the regulation of agricultural and industrial activities. (author)

  7. Natural radionuclides distribution in the shelf and upper slope of southeast Brazil

    International Nuclear Information System (INIS)

    In recent decades, Oceanography has been using a variety of radionuclides as tracers to understand the ocean dynamic processes, handling and disposal of sediments of seabed. In this context, the determination of natural radionuclides distributions (238U, 232Th and 40K) has been carried out with sediments samples from the shelf and upper slope off Southeast Brazil using a gamma spectrometry technique. The samples were sliced into strata of 2 cm, dried, ground and properly packed to be analysed. The concentration of activities was performed in a hyperpure Ge detector with a resolution of 1,9 keV for the peak of 1332,3 keV of 60Co, model GEM50P by EGG and ORTEC. The study area is located between latitudes 28 deg 40'S and 23 deg 00'S and extends from Cabo Frio (RJ) to Cabo de Santa Marta Grande (SC). The activity concentrations varied from 0,6 to 52,8 BqKg-1 for 238U, from 1,6 to 50,9BqKg-1 for 232Th and from 65,4 to 873,3 BqKg-1 for 40K. From these results it is possible to establish a correlation between the depositional area dynamics and the samples size parameters. (author)

  8. Spatial-temporal distribution of fire-protected savanna physiognomies in Southeastern Brazil.

    Science.gov (United States)

    Pinheiro, Marcelo H O; Azevedo, Thiago S de; Monteiro, Reinaldo

    2010-06-01

    The analysis of the influence of edaphic finer textures, as a facilitating factor for the expansion of forest formations in the absence of fire, was possible thanks to rare characteristics found in a savanna fragment located in the State of São Paulo, Brazil. The total suppression of fire for over four decades, and the occurrence of two savanna physiognomies, cerrado sensu stricto and cerradão, allowed the conduction of this study based on the hypothesis that cerradão, a physiognomy of forest aspect consisting of fire-sensitive tree and shrubs species, is favored by fire absence and higher soil hydric retention capacity. Edaphic samples were collected from a regular grid of 200 m(2) for the production of isopletic maps of the distribution of clay, fine sand, coarse sand and silt edaphic textures by the geostatistic method of ordinary kriging. Changes in the areas occupied by both savanna physiognomies, defined on the basis of aerial photographs taken over a period of 43 years, were assessed through mean variation rates. Besides corroborating the hypothesis of edaphic hydric retention as a facilitating factor for the expansion of forest physiognomies in savanna areas, we were able to infer the positive influence of higher precipitation on the increase in cerradão expansion rates. PMID:20563419

  9. Altitudinal distribution of birds in a mountainous region in southeastern Brazil

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    Francisco Mallet-Rodrigues

    2010-08-01

    Full Text Available We studied the altitudinal distribution of 426 bird species in the Serra dos Órgãos, a mountainous region in southeastern Brazil. Thirty-four localities were visited between 1991 and 2009. Our study revealed a decline in bird species richness with elevation, although a smaller number of species was recorded at lower altitudes (below 300 m possibly due to local extinctions caused by the intense human occupation of the region. A less diverse avifauna was found above 2,000 m, with only one species (Caprimulgus longirostris recorded exclusively in this altitudinal range. Most endemic species were found between 300 and 1,200 m, but the endemism was more significant at higher altitudes. Nearly half of the birds found above 1,400 m were endemic species. Most of the threatened species from the state of Rio de Janeiro recorded in our study were found below 1,200 m, but no significant difference was found between the proportions of threatened species among different altitudinal ranges. Species of seventeen genera have exhibited some replacement (sometimes with partial overlap along altitudinal gradients.

  10. Fasciola hepatica IN BOVINES IN BRAZIL: DATA AVAILABILITY AND SPATIAL DISTRIBUTION

    Directory of Open Access Journals (Sweden)

    Sita C. Bennema

    2014-01-01

    Full Text Available Fasciolosis is a disease of importance for both veterinary and public health. For the first time, georeferenced prevalence data of Fasciola hepatica in bovines were collected and mapped for the Brazilian territory and data availability was discussed. Bovine fasciolosis in Brazil is monitored on a Federal, State and Municipal level, and to improve monitoring it is essential to combine the data collected on these three levels into one dataset. Data were collected for 1032 municipalities where livers were condemned by the Federal Inspection Service (MAPA/SIF because of the presence of F. hepatica. The information was distributed over 11 states: Espírito Santo, Goiás, Minas Gerais, Mato Grosso do Sul, Mato Grosso, Pará, Paraná, Rio de Janeiro, Rio Grande do Sul, Santa Catarina and São Paulo. The highest prevalence of fasciolosis was observed in the southern states, with disease clusters along the coast of Paraná and Santa Catarina and in Rio Grande do Sul. Also, temporal variation of the prevalence was observed. The observed prevalence and the kriged prevalence maps presented in this paper can assist both animal and human health workers in estimating the risk of infection in their state or municipality.

  11. Seasonal production and spatial distribution of Melipona bicolor schencki (Apidae; Meliponini) castes in brood combs in southern Brazil

    OpenAIRE

    Jr, Ney; Blochtein, Betina; Serrão, José

    2013-01-01

    Melipona bicolor schencki is currently considered a threatened stingless bee in southern Brazil, and studies about its ecology may provide new insights to enable its conservation. This study evaluated the seasonal variability in the sex/caste proportion, numbers of combs and brood cells, and spatial distribution of the individuals present in emerging combs in five polygynous colonies of M. bicolor schencki for 1 year. Throughout the year, the colonies showed similar variations. Individual com...

  12. Diversity and distribution of the bryophyte flora in montane forests in the Chapada Diamantina region of Brazil

    OpenAIRE

    Emilia de Brito Valente; Kátia Cavalcanti Pôrto; Cid José Passos Bastos; Jana Ballejos-Loyola

    2013-01-01

    Bryophytes constitute an important component of tropical rain forests, which provide microhabitats favorable for their establishment. Bryophytes are also quite responsive to changes in microclimate, which makes them good bioindicators. This study aimed to determine the diversity and distribution of bryophytes in upper and lower montane forests of the Chapada Diamantina region of the state of Bahia, Brazil. To that end, we studied community aspects such as richness, diversity, substrates colon...

  13. Distribution, abundance and biomass of Chaetognaths off São Sebastião region, Brazil in February 1994

    OpenAIRE

    Tsui-Hua Liang; Luz Amelia Vega-Perez

    2002-01-01

    The distribution, abundance, biomass, population structure and feeding habits of chaetognaths collected off São Sebastião region, Brazil, in February 1994 are described. Bongo nets were hauled obliquely to collect zooplankton samples. Forty-three samples obtained with the 333 urn mesh were analysed. In this study, 7 chaetognath species belonging to two genera were identified. Sagitta friderici, S. tenuis and S. bipunctata were grouped into the neritic category, and Sagitta enflata, S. hispida...

  14. Water pollution and distribution of the black fly (Diptera: Simuliidae) in the Atlantic Forest, Brazil.

    Science.gov (United States)

    Docile, Tatiana N; Figueiró, Ronaldo; Gil-Azevedo, Leonardo H; Nessimian, Jorge L

    2015-09-01

    Black flies have medical importance because some species are vectors of the unenocerciasis and Mansonelosis, nevertheless, their ecology and potential use as bioindicators is still poorly studied in the Neotropical Region. In Brazil, bioindicators use is strongly focused in a multimetrical ecological index approach; this way, we investigated the black fly spatial distribution, in relation to abiotic factors correlated to water quality, to provide baseline information for their utilization as standalone indicators of lotic systems integrity. We have tested the hypothesis that environmental changes related to urbanization, lead to decreased abundance and loss in the number of species of the black fly fauna. The sampling was conducted in 10 urban and 10 preserved streams during the dry season (August-September) of 2012, in the mountainous region of Teres6polis, State of Rio de Janeiro, Brazil. The streams were characterized for their environmental integrity conditions and physico-chemical properties of water. In each stream, five different rapid points were sampled in a section of 50 meters, 10 meters apart from each other. The black flies were sampled with a kick-net sampler on rocky substrates. The material was separated and the larvae were sorted in morphotypes, and later, the final instar specimens were dissected and identified with the help of taxonomical literature at species level. A total abundance of 488 larvae from nine species were collected, 5 (1.02 %) in extremely impacted streams, 470 (96.31 %) in intermediate streams and 13 (2.66 %) in preserved streams. The visual evaluation (HII) differed in relation to the water physico-chemical evaluation, in which more variation in the characterization of the sampling sites was observed. In Canonical Correspondence Analysis Simulium subpallidum, S. inscrustatum and S. pertinax were significantly associated with intermediate values of most of the variables, and then to intermediate impacted sites. On the other hand

  15. Spatial distribution of mollusks in the intertidal zone of sheltered beaches in southeastern of Brazil

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    Eliane P. de Arruda

    2003-06-01

    Full Text Available The spatial distribution of mollusks in the intertidal zone was examined monthly from August 1995 through July 1997, in Enseada, Barra Velha and Araçá beaches in southeastern of Brazil. One study sector was selected in Enseada and Barra Velha, and two sectors in Araçá (Araçá I and Araçá II. The sectors were 10 m wide and equivalent in length to the width of the intertidal zone. Each sector was divided into three horizontal levels: lower, middle and upper, where the samples were taken with a cylinder corer with a base area of 0.16 m². In order to characterize the intertidal environment in these areas, some environmental variables were analyzed. In general, the mollusks were distributed in the sectors as follows: Enseada - Olivella minuta (Link, 1807 in the lower level and Tagelus plebeius (Lightfoot, 1786 in the upper level; Araçá I - O. minuta in the lower level, Tellina lineata Turton, 1819 and Anomalocardia brasiliana (Gmelin, 1791 in the middle levels; Araçá II - Cerithium atratum (Born, 1778 in the lower level, O. minuta in the lower and middle levels, and A. brasiliana and Corbula caribaea Orbigny, 1842 in the middle level; Barra Velha - Tagelus divisus (Spengler, 1794, Lucina pectinata (Gmelin, 1791 and Tellina versicolor De Kay, 1843 in the lower level, and A. brasiliana and Macoma constricta (Brugüìere, 1792 in the upper level. The intertidal zone of the study sectors could be divided into two biological zones: the upper zone, where T. plebeius, A. brasiliana and M. constricta were more abundant; and the lower zone, where O. minuta, C. atratum, T. lineata, T. versicolor, C. caribaea, T. divisus and L. pectinata were abundant.

  16. Spatial distribution of schistosomiasis and geohelminthiasis cases in the rural areas of Pernambuco, Brazil

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    Verônica Santos Barbosa

    2012-10-01

    Full Text Available INTRODUCTION: The prevalence and intensity of geohelminth infections and schistosomiasis remain high in the rural areas of Zona da Mata, Pernambuco (ZMP, Brazil, where these parasites still represent a significant public health problem. The present study aimed to spatially assess the occurrences of schistosomiasis and geohelminthiasis in the ZMP. METHODS: The ZMP has a population of 1,132,544 inhabitants, formed by 43 municipalities. An ecological study was conducted, using secondary data relating to positive human cases and parasite loads of schistosomiasis and positive human cases of geohelminthiasis that were worked up in Excel 2007. We used the coordinates of the municipal headquarters to represent the cities which served as the unit of analysis of this study. The Kernel estimator was used to spatially analyze the data and identify distribution patterns and case densities, with analysis done in ArcGIS software. RESULTS: Spatial analysis from the Kernel intensity estimator made it possible to construct density maps showing that the northern ZMP was the region with the greatest number of children infected with parasites and the populations most intensely infected by Schistosoma mansoni. In relation to geohelminths, there was higher spatial distribution of cases of Ascaris lumbricoides and Trichuris trichiura in the southern ZMP, and greater occurrence of hookworms in the northern/central ZMP. CONCLUSIONS: Despite several surveys and studies showing occurrences of schistosomiasis and geohelminthiasis in the ZMP, no preventive measures that are known to have been effective in decreasing these health hazards have yet been implemented in the endemic area.

  17. A computable general equilibrium model to analyze distributive aspects in Brazil with a trade policy illustration

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    Samir Cury

    2005-12-01

    Full Text Available This paper presents a Computable General Equilibrium model specified to simulate the policy impacts on income distribution in Brazil, with complex and systemic propagation methods. To capture the distributive impacts, the model adopts a design focused on the separation of production and institutional factors, as labor and households. The model has three blocks: product and factor markets, and a block that handles with income transfers among institutions. The labor market specification incorporates a recent theoretical advance that allows the determination of involuntary unemployment in the equilibrium. The third block specifies the distribution of the value added among production factors and the redistribution of income among agents/institutions. The simulations of a partial economic "closure" show modest welfare reduction for most workers and families. Also, we checked that the homogeneity property of the model holds only with full indexation of all income transfers, which has important implications for the income distribution process modeling.Neste artigo é apresentado um modelo de Equilíbrio Geral Computável especificado para simular os impactos de políticas na distribuição de renda no Brasil. Para capturar os impactos distributivos, fatores de produção e instituições, como trabalho e famílias, são especificados separadamente. O modelo apresenta três blocos: mercados de produtos e fatores, e outro bloco com especificação das transferências de renda entre instituições. A especificação do mercado de trabalho incorpora recente avanço teórico que permite a determinação do desemprego involuntário no equilíbrio. No terceiro bloco, especifica-se a distribuição do valor adicionado entre fatores de produção e a redistribuição de renda entre agentes/instituições. As simulações do fechamento "parcial" da economia mostram pequena redução de bem-estar para a maioria dos trabalhadores e famílias. Verificou-se ainda

  18. Selection of common bean (Phaseolus vulgaris L.) genotypes using a genotype plus genotype x environment interaction biplot.

    Science.gov (United States)

    Corrêa, A M; Teodoro, P E; Gonçalves, M C; Santos, A; Torres, F E

    2016-01-01

    Recently, the genotype plus genotype x environment interaction (GGE) biplot methodology has been used to investigate genotype x environment interactions in several crop species, but has not been applied to the common bean (Phaseolus vulgaris L.) crop in Brazil. The aim of this study was to identify common bean genotypes that exhibit high grain yield and stability in the State of Mato Grosso do Sul, Brazil. We conducted 12 trials from 2000 to 2006 in the municipalities of Aquidauana and Dourados, and evaluated 13 genotypes in a randomized block design with three replications. Grain yield data were subjected to individual and joint analyses of variance. After analyzing the GE interaction, the adaptability and phenotypic stability of the common bean genotypes were analyzed using GGE biplot methodology. The genotypes EMGOPA-201, Xamego, and Aporé are recommended for growing in Mato Grosso do Sul, because they exhibited high grain yield and phenotypic stability. PMID:27525915

  19. The regulatory aspects of bulk natural gas distribution market: the case of the Espirito Santo state, Brazil; Aspectos regulatorios do mercado de distribuicao de gas natural a granel: o caso do estado do Espirito Santo, Brasil

    Energy Technology Data Exchange (ETDEWEB)

    Campos, Adriana Fiorotti; Moraes, Natalia Goncalvez de [Universidade Federal do Rio de Janeiro (PPE/COPPE/UFRJ), RJ (Brazil). Coordenacao dos Programas de Pos-Graduacao de Engenharia. Programa de Planejamento Energetico; Carolino, Jaqueline [Universidade Federal do Espirito Santo (UFES), Vitoria, ES (Brazil)

    2010-07-01

    This paper presents the regulatory aspects of the natural gas in Brazil, and particularly focusing the segment of distribution and also how the regulatory and institutional changes happened at the Espirito Santo state, Brazil.

  20. Prevalence of HBV genotypes in South American immigrants affected by HBV-related chronic active hepatitis

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    Emilio Palumbo

    2007-06-01

    Full Text Available This study evaluated the prevalence of HBV infection in a population of South American immigrants in Italy and to determine in patients with detectable serum HBV-DNA the HBVgenotypes. Between April 2005 and April 2006 a total of 130 South American immigrants were tested for HBsAg. In HBsAg positive patients the biochemical and virological activity of infection and the possible presence of co-infections (HCV, HDV, HIV were evaluated. In patients with detectable serum HBV DNA, the HBV genotype was determined by INNOLiPA. Among the 130 subjects tested, 14 (10.7% resulted HBsAg positive. All were men, with a mean age of 22 years (range 19-37 and 12 (85.7 % came from Brazil, while 2 (14.3% came from Ecuador. All patients infected by HBV had elevated alanine-aminotransferase serum levels (mean level was 127 IU/L, range 74-312 and serum HBV DNA detectable by PCR-Real Time (mean level 1,037,652 copies/mL, range 19,876-1,377,648. Genotype distribution was as follow: genotype D, 9 (64.2%, genotype A, 5 (35.8%. All patients infected by genotype D came from Brazil, while among the patients infected by genotype A, three came from Brazil and two from Ecuador. Our study evidences a moderate prevalence of HBV-infection in South American immigrants with the identification of two genotypes, D and A. These genotypes are not the most prevalent in the South America and this is probably the expression of a possible geographical redistribution of HBV genotypes.

  1. Survey of the manatee´s (Trichechus manatus, Linnaeus, 1758) distribution, occurrence and status of conservation in the northeast coast of Brazil

    OpenAIRE

    Régis Pinto de Lima; Danielle Paludo; Ricardo José Soavinski; Kleber Grubel da Silva; Eunice Maria Almeida de Oliveira

    2011-01-01

    In the early 80's the first survey was conducted on the distribution of marine manatees in Brazil, which pointed out the north and northeast coasts as areas of occurrence, and recorded its disappearance in the Espirito Santo and Bahia States. Considering the absence of recent data, this study aimed to update existing information on the distribution and areas of occurrence of the Trichechus manatus in the Northeastern coast of Brazil, as well as evaluating the conservation status of species an...

  2. SPATIAL DISTRIBUTION OF LYMNAEIDAE (MOLLUSCA, BASOMMATOPHORA, INTERMEDIATE HOST OF Fasciola hepatica LINNAEUS, 1758 (TREMATODA, DIGENEA IN BRAZIL

    Directory of Open Access Journals (Sweden)

    Camilla Medeiros

    2014-06-01

    Full Text Available Snails of the family Lymnaeidae act as intermediate hosts in the biological cycle of Fasciola hepatica, which is a biological agent of fasciolosis, a parasitic disease of medical importance for humans and animals. The present work aimed to update and map the spatial distribution of the intermediate host snails of F. hepatica in Brazil. Data on the distribution of lymnaeids species were compiled from the Collection of Medical Malacology (Fiocruz-CMM, CPqRR, Collection of Malacology (MZUSP, “SpeciesLink” (CRIA network and through systematic surveys in the literature. Our maps of the distribution of lymnaeids show that Pseudosuccinea columella is the most common species and it is widespread in the South and Southeast with few records in the Midwest, North and Northeast regions. The distribution of the Galba viatrix, G. cubensis and G. truncatula showed a few records in the South and Southeast regions, they were not reported for the Midwest, North and Northeast. In addition, in the South region there are a few records for G. viatrix and one occurrence of Lymnaea rupestris. Our findings resulted in the first map of the spatial distribution of Lymnaeidae species in Brazil which might be useful to better understand the fasciolosis distribution and delineate priority areas for control interventions.

  3. Genotypic distribution and phylogenetic characterization of Enterocytozoon bieneusi in diarrheic chickens and pigs in multiple cities, China: potential zoonotic transmission.

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    Wei Li

    Full Text Available This study investigated diarrheic broiler and layer chickens (60 days; n=64 for E. bieneusi genotypes in northeast China and evaluated the potential roles of chickens and pigs in zoonotic transmission of microsporidiosis. Two 45-day-old layer chickens in city Jixi, Heilongjiang province and one 23-day-old broiler chicken in city Songyuan, Jilin province were identified to harbor a human-pathogenic E. bieneusi genotype Henan-IV and a new genotype named CC-1, respectively, by nested PCR and sequence analysis of the ribosomal internal transcribed spacer (ITS. Eleven of 64 (17.2% duodenal mucosal specimens from pigs in city Tianjin, city Tongliao of Inner Mongolia, cities Jilin and Songyuan of Jilin province, and cities Daqing, Harbin, and Suihua of Heilongjiang province, were positive for E. bieneusi, with the infection rates of weaned pigs (35%, 7/20 significantly higher than preweaned ones (3.6%, 1/28; P<0.05. Nucleotide sequences of the ITS were obtained from 6 pig specimens, belonging to 3 known genotypes CHN7, EbpC, and Henan-IV. That the previous reports have described the occurrence of genotypes EbpC and Henan-IV in humans and EbpC in wastewater in central China and the clustering of genotypes CC-1 and CHN7 into a major phylogenetic group of E. bieneusi genotypes with zoonotic potential indicated that chickens and pigs could be potential sources of human micorsporidiosis. To our knowledge, this is the first report describing the existence of zoonotic E. bieneusi genotypes in diarrheic chickens.

  4. Export-Led Growth and Geographic Distribution of the Poultry Meat Industry in Brazil

    OpenAIRE

    Ueki, Yasushi

    2006-01-01

    This paper includes an examination of the sustainability of recent high growth in the poultry meat industry in Brazil. In addition, an assessment is made of the impact of increased production of poultry meat products on the development of local industries. Comparative studies of leading companies in the United States, Mexico, and Brazil reveal competitive advantages in the low costs of feedstuff and labor as well as disadvantages in the scale of business and management efficiency in the Brazi...

  5. Filling data gaps on the diversity and distribution of Amazonian bats (Chiroptera): the case of Amapá, easternmost Brazil

    OpenAIRE

    Ana C. M. Martins; Enrico Bernard; Renato Gregorin; Wanuyze A. S. da Silva

    2011-01-01

    Brazil is the second most bat species-rich country in the world, but the information on its species diversity, occurrence and distribution is still heterogeneous and fragmented. None of the Brazilian biomes are well surveyed for bats, but this situation is more critical in Amazonia, an area covering nearly 2/3 of the country. Here we provide updated information on the bats of Amapá, once a data gap in the diversity and distribution of bats in the easternmost Amazonia, and the Guiana Shield as...

  6. Spatial distribution of triatomines (Reduviidae: Triatominae in urban areas of the city of Salvador, Bahia, Brazil

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    Karine de Souza O. Santana

    2011-05-01

    Full Text Available Environmental changes have a strong influence on the emergence and/or reemergence of infectious diseases. The city of Salvador, Brazil -currently the focus of a housing boom linked to massive deforestation- is an example in point as the destruction of the remaining areas of the Atlantic Forest around the city has led to an increased risk for Chagas disease. Human domiciles have been invaded by the triatomine vectors of Trypansoma cruzi, the flagellate protozoan causing Chagas disease, a problem of particular concern in urban/suburban areas of the city such as the Patamares sector in the north-east, where numbers of both the vector and human cases of the disease have increased lately. To control and prevent further deterioration of the situation, the control programme for Chagas disease, developed by the Bahia Center for Zoonosis Control, has divided the area into a grid of designated surveillance units (ZIs that are subjected to vector examination. In six out of 98 of these ZIs, 988 triatomes were collected and georeferenced during the 3-year period between 2006 and 2009. The hottest months, that are also generally the driest, showed the highest numbers of triatomines with Triatoma tibiamaculata being the predominant species (98.3% with Panstrongylus geniculatus present only occasionally (0.6%. Fifty-four percent of all triatomines captured were found inside the homes, and 48.6% out of 479 individuals in the affected ZIs selected for analysis tested positive for T. cruzi infection. The study presented here is a pioneering initiative to map the spatial distribution of triatomines based on geographical information systems with the additional aim of contributing to an expanded knowledge-base about T. cruzi and its vectors in urban areas and raise public health awareness of the risks involved.

  7. Distribution of trace elements in tissues of shrimp species Litopenaeus vannamei (Boone, 1931) from Bahia, Brazil.

    Science.gov (United States)

    Silva, E; Viana, Z C V; Onofre, C R E; Korn, M G A; Santos, V L C S

    2016-02-01

    In this study, concentrations of trace elements in tissues of shrimp species (Litopenaeus vannamei) from farming and zone natural coastal located in the northeastern Brazil were investigated. The elements determination was performed by optical emission spectrometry with inductively coupled plasma (ICP OES). The following ranges of concentrations in the tissues were obtained in µg g-1 dry weight: Al: 13.4-886.5, Cd: 0.93-1.80; Cu: 24.8-152; Fe: 3.2-410.9; Mn: 0.36-24.4; Se: 0.094-9.81 and Zn: 20.3-109.4. The shrimp muscle can be a good iron source (about 88.9 mg-1g dry weight). The distribution of Se concentration in tissues showed much variation between locations, and the concentration levels found in shrimp muscles of wild samples were high, where its levels in 67% of muscle and 50% of others tissues samples exceeded the ANVISA limit, indicating evidence of selenium bioaccumulation. Significant correlation was observed between the following pairs of elements: Fe-Zn (r= -0.70), Mn-Cu (r= -0.74), Se-Cu (r= -0.68), Se-Mn (r= 0.82) in the muscles; Fe-Al (r= 0.99), Mn-Al (r= 0.62), Mn-Fe (r= 0.62), Se-Al (r = 0.88), Se-Fe (r= 0.87), Se-Mn (r= 0.58) in the exoskeleton and Cu-Zn (r = 0.68), Al-Cu (r= 0.88), Fe-Cu (r= 0.95) and Fe-Al (r= 0.97) in the viscera. PMID:26909636

  8. Genotype distribution of human papillomavirus (HPV) and co-infections in cervical cytologic specimens from two outpatient gynecological clinics in a region of southeast Spain

    OpenAIRE

    Egea-Cortines Marcos; Pérez-Guillermo Miguel; Orantes-Casado Francisco; Doménech-Peris Asunción; Moya-Biosca Joaquín; Ortiz-Reina Sebastián; Conesa-Zamora Pablo

    2009-01-01

    Abstract Background Human Papillomavirus (HPV) genotype distribution and co-infection occurrence was studied in cervical cytologic specimens from Murcia Region, (southeast Spain), to obtain information regarding the possible effect of the ongoing vaccination campaign against HPV16 and HPV18. Methods A total of 458 cytologic specimens were obtained from two outpatient gynecological clinics. These included 288 normal benign (N/B) specimens, 56 atypical squamous cell of undetermined significance...

  9. Distribution of genotypes C825T polymorphism G-protein β3-subunit gene in patients with hypertension depending on body mass index

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    Prystupa L.N.

    2015-09-01

    Full Text Available The aim of the study was to investigate the frequency of genotypes of C825T polymorphism G-protein β3-subunit gene (GNB3 in patients with arterial hypertension (AH, depending on body mass index (BMI. The study involved 155 patients with verified diagnosis of AH (study group and 50 healthy individuals (control group. The patients of the main group were divided into 3 groups according to BMI: I - 35 patients with normal body weight, II - 38 patients with overweight, III - 82 patients with obesity. We used general clinical, anthropometric, instrumental, molecular-genetic and statistical methods. Probability of differences in the frequency of alleles and genotypes was determined using χ² criteria. Pairwise comparison of groups was made using nonparametric Mann-Whitney test. The difference was considered statistically significant at p <0,05. Investigation of the distribution of genotypes C825T polymorphism GNB3 in patients with AH according to BMI showed statistically significant increase in the frequency of genotypes C / T and T / T and T allele in patients with overweight and obesity as compared with patients with normal body weight (χ² = 26 8; p <0.001. The risk of weight increase in AH patients with T allele carriers is 2,2 times higher than in C allele carriers. Association of C825T polymorphism of GNB3 with a tendency to obesity and overweight in patients with AH was proved.

  10. Spatial urban restructuring for economic growth with distribution: The case of Ceara (Brazil)

    OpenAIRE

    Raphael BAR-EL; Schwartz, Dafna

    2003-01-01

    One of the most important challenges of economic policy is the combination between economic growth and the reduction of inequality and poverty. The change of the regime in Brazil can be seen as a reaction to the failure of economic policy in this field. We focus on the case of one of Brazil's states in the Northeast, Ceara, that experienced a rapid macro economic growth in the last decade, but with no reduction of poverty and inequality. Established economic theory shows that economic growth ...

  11. Perilestes eustaquioi sp. nov. and new distributional records of Perilestidae (Odonata in Brazil

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    Angelo B. M. Machado

    2015-10-01

    Full Text Available ABSTRACT Perilestes eustaquioi sp. nov. (holotype male deposited in ABMM collection from the state of Bahia (municipality of Una, northeastern Brazil, is described and illustrated based on one male specimen. It differs from the other species of the genus mainly by the larger size of the anteclypeus in relations to the postclypeus. Together with P. fragilis Hagen in Selys, 1862 from the state of Sergipe and P. solutus Williamson & Williamson, 1924 from the state of Ceará, these are the first records of Perilestidae from northeastern Brazil.

  12. Studies on chaetognaths off Ubatuba region, Brazil: I. distribution and abundance

    Directory of Open Access Journals (Sweden)

    Liang Tsui Hua

    1994-12-01

    Full Text Available The distribution of chaetognath species off Ubatuba region, São Paulo State, Brazil, was studied during a program of multidisciplinary research. Ten species belonging to the genera Sagitta, Krohnita and Pterosagitta were identified. S. enflata was the dominant species followed by S.friderici and S. hispida. The species S. enflata, S. hispida, S. tenuis, S. bipunctata and JC pacifica were found in the Shelf water whereas S. serratodentata, S. minima, S. hexaptera and P. draco in the Tropical water. Only S. friderici was found associated to Coastal water. Hydrological conditions affected population structure, size of individuals and abundance.A ocorrência, distribuição, freqüência dos estágios de maturidade e comprimento total do corpo das espécies do filo Chaetognatha foram estudados. As amostras foram obtidas com o auxílio de rede Bongo, nos verões de 1985 - 1987 e invernos de 1986 e 1987, durante o Projeto "Utilização Racional do Ecossistema Costeiro da Região Tropical Brasileira, Estado de São Paulo". Dez espécies foram identificadas, sendo Sagitta enflata, S. friderici e S. hispida as espécies mais abundantes. S. enflata, S. hispida, S. tenuis, S. bipunctata e Krohnita pacifica estão associadas à água de Plataforma enquanto que S. serratodentata, S. hexaptera, S. minima e Pterosagitta draco à água Tropical. Apenas S. friderici mostrou preferência por água Costeira. Diferenças sazonais na estrutura da população, tamanho dos indivíduos, abundância e distribuição estão associados à hidrodinâmica local. Nos verões, os quetognatos apresentaram maior número de estágios maduros nas amostras examinadas, comprimentos maiores e baixa abundância como conseqüência da intrusão da água Central do Atlântico Sul que provocou uma estratificação térmica característica. Em contraposição, nestas amostras, nos invernos, a população é formada por indivíduos de estágios jovens, de comprimentos menores e grande

  13. Estabilidade fenotípica de genótipos de algodoeiro no Estado do Mato Grosso Phenotypic stability in cotton genotypes in Mato Grosso State, Brazil

    Directory of Open Access Journals (Sweden)

    Eulália Soler Sobreira Hoogerheide

    2007-05-01

    Full Text Available Foram avaliados oito genótipos de algodoeiro herbáceo, sendo três linhagens e cinco cultivares, com o objetivo de estimar a adaptabilidade e estabilidade fenotípica para o caráter produtividade de algodão em caroço, pelo método Eberhart e Russell. Foram conduzidos 12 experimentos em 11 locais no Estado do Mato Grosso, sob um delineamento de blocos ao acaso com oito repetições, no ano agrícola 2000/2001. Praticamente todos os genótipos apresentaram coeficiente de determinação acima de 85%, exceto Delta Opal. As estimativas de adaptabilidade indicam que todos os genótipos apresentaram adaptação ampla (b i = 1. Quanto à estabilidade, os genótipos CNPA ITA 90, BRS Antares, CNPA 96-124, CNPA 96-283 e BRS Aroeira revelaram-se estáveis (S²d i= 0. Os melhores genótipos, caracterizados pela maior produtividade, estabilidade e adaptabilidade ampla foram CNPA ITA 90, BRS Aroeira e CNPA 96-124.Eight cotton genotypes, three lines and five cultivars, were evaluated for estimation of phenotypic adaptability and stability parameters relative to cotton yield using the method proposed by Eberhart and Russell. Twelve yield trials, in randomized complete blocks, comprising eight replications, were carried out in 11 locations of the Mato Grosso State, during the 2000/2001 crop season. All the genotypes showed determination coefficient above of 85%, except Delta Opal. For the estimates of adaptability, all the genotypes presented broad adaptation (b i = 1. The genotypes CNPA ITA 90, BRS Antares, CNPA 96-124, CNPA 96-283 and BRS Aroeira showing hight stability (S²d i= 0. The best genotypes, characterized by higher yield, stability and broad adaptability, were CNPA ITA 90, BRS Aroeira and CNPA 96-124.

  14. Mapping Fractional Cropland Distribution in Mato Grosso, Brazil Using Time Series MODIS Enhanced Vegetation Index and Landsat Thematic Mapper Data

    Directory of Open Access Journals (Sweden)

    Changming Zhu

    2015-12-01

    Full Text Available Mapping cropland distribution over large areas has attracted great attention in recent years, however, traditional pixel-based classification approaches produce high uncertainty in cropland area statistics. This study proposes a new approach to map fractional cropland distribution in Mato Grosso, Brazil using time series MODIS enhanced vegetation index (EVI and Landsat Thematic Mapper (TM data. The major steps include: (1 remove noise and clouds/shadows contamination using the Savizky–Gloay filter and temporal resampling algorithm based on the time series MODIS EVI data; (2 identify the best periods to extract croplands through crop phenology analysis; (3 develop a seasonal dynamic index (SDI from the time series MODIS EVI data based on three key stages: sowing, growing, and harvest; and (4 develop a regression model to estimate cropland fraction based on the relationship between SDI and Landsat-derived fractional cropland data. The root mean squared error of 0.14 was obtained based on the analysis of randomly selected 500 sample plots. This research shows that the proposed approach is promising for rapidly mapping fractional cropland distribution in Mato Grosso, Brazil.

  15. Privatization of electricity distribution in the Northeast of Brazil: The good, the bad, the ugly or the naive?

    International Nuclear Information System (INIS)

    This paper analyzes the evolution of five electricity distribution companies in the Northeast of Brazil using technical and financial indicators. Three privatized and two public firms were analyzed between 1997 and 2008. The financial indicators are used as proxies for the capacity of the business to generate value for shareholders, while the technical indicators are used as proxies for service quality provided to consumers. We observed that the privatized firms had their financial indicators improved after privatization, increasing the value of the firm for the shareholders. However, there is no evidence that privatization affected the quality of service provided to consumers.

  16. Temporal distribution of five bat species (Chiroptera, Phyllostomidae from Panga Reserve, south-eastern Brazil

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    Wagner A. Pedro

    2002-09-01

    Full Text Available Data about activity patterns, hourly and monthly, on five phyllostomid bats, Glossophaga soricina (Pallas, 1766, Anoura caudifer (E. Geoffroy, 1818, Camilla perspicillata (Linnaeus, 1758, Sturnira lilium (E. Geoffroy, 1810 and Platyrrhinus lineatus (E. Geoffroyi, 1810, studied over a one year period at the Panga Ecological Reserve, Uberlandia, Minas Gerais state, south-eastern Brazil, are reported and discussed.

  17. Temporal distribution of five bat species (Chiroptera, Phyllostomidae) from Panga Reserve, south-eastern Brazil

    OpenAIRE

    Wagner A Pedro; Valdir A. Taddei

    2002-01-01

    Data about activity patterns, hourly and monthly, on five phyllostomid bats, Glossophaga soricina (Pallas, 1766), Anoura caudifer (E. Geoffroy, 1818), Camilla perspicillata (Linnaeus, 1758), Sturnira lilium (E. Geoffroy, 1810) and Platyrrhinus lineatus (E. Geoffroyi, 1810), studied over a one year period at the Panga Ecological Reserve, Uberlandia, Minas Gerais state, south-eastern Brazil, are reported and discussed.

  18. Fuel distribution logistics in Brazil: technical and economic aspects; Aspectos tecnico-economicos da logistica da distribuicao de combustiveis no Brasil

    Energy Technology Data Exchange (ETDEWEB)

    Esteves, Heloisa Borges B.; Bicalho, Lucia N. [Agencia Nacional do Petroleo, Gas Natural e Biocombustiveis (ANP), Rio de Janeiro, RJ (Brazil)

    2008-07-01

    In Brazil, there are around 250 companies operating in the automotive fuel distribution segment, responsible for the automotive fuels wholesale commercialization activity. Those companies supply not only gas stations, but also final consumers and TRR's. Their clients are distributed regionally, which requires flexibility and the ability to supply clients efficiently at the smaller possible cost, transforming variables such as the transportation alternatives adopted, the location of the storage facilities and its correct dimension on key decisions. This paper analyses the general scenario of the fuels distribution logistics in Brazil from a economic perspective, and its impacts on the companies competitive strategies. (author)

  19. Seasonal chaetognath abundance and distribution in a tropical estuary (Southeastern, Brazil

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    Luiz Loureiro Fernandes

    2005-06-01

    Full Text Available This study focuses on the seasonal variation of the chaetognath species in the Vitória Bay/Passage Channel estuarine system, Espírito Santo, Brazil, in terms of their abundance and distribution. Specimens of chaetognaths were collected between July 1997 and April 1998 at 10 sampling stations, with a cylindrical-conical plankton net of 200 µm mesh and 30 cm mouth, fitted with a mechanical flowmeter. Five chaetognath species were identified: Sagitta enflata, Sagitta decipiens, Sagitta hispida, Sagitta friderici and Sagitta minima. Most of them were distributed in areas of high salinity (e.g. at the stations closest to the outer estuary. The dominant species, S. enflata and S. friderici, were more frequent in the outer estuary where salinities varied from 32 (wet season - summer to 28 (dry season - winter. S. friderici was the only species found right in the middle of the Passage Channel, at a station close to the main freshwater input into the estuary. Results showed that chaetognaths only enter the estuary due to the tidal effect, and that they are not typical residents of this system. This is to be expected because the group normally inhabits only truly marine regions.Este estudo abordou a abundância e distribuição sazonal das espécies de quetognatos, no sistema estuarino baía de Vitória/Canal da Passagem, Espírito Santo, Brasil. Os organismos foram coletados entre julho de 1997 e abril de 1998 em 10 estações amostrais, utilizando uma rede de plâncton cilíndrico-cônica de 200µm de malha e 30 cm de abertura de boca, dotada de um fluxômetro mecânico. Cinco espécies de quetognatos foram identificadas: Sagitta enflata, Sagitta decipiens, Sagitta hispida, Sagitta friderici e Sagitta minima. A maioria destas espécies esteve distribuída em áreas com alta salinidade (e.g. estações próximas a saída do estuário. As espécies dominantes S. enflata e S. friderici foram mais freqüentes na parte externa do estuário onde as

  20. Phenotypic and genotypic characteristics of shiga toxin-producing Escherichia coli strains isolated from children in São Paulo, Brazil

    OpenAIRE

    Guth Beatriz EC; Ramos Sônia RTS; Cerqueira Aloysio MF; Andrade João RC; Gomes Tânia AT

    2002-01-01

    The biochemical and serological characteristics, virulence properties, and genetic relatedness of Shiga toxin-producing Escherichia coli (STEC) strains isolated in São Paulo, from April 1989 through March 1990, were determined. This is also the first report on clinic findings of human STEC infections in Brazil. The only three STEC strains identified in that period were lysine decarboxylase negative, belonged to serotype O111ac: non-motile, were Stx1 producers, carried the eae and astA genes, ...

  1. Stability and adaptability of runner peanut genotypes based on nonlinear regression and AMMI analysis

    Directory of Open Access Journals (Sweden)

    Roseane Cavalcanti dos Santos

    2012-08-01

    Full Text Available The objective of this work was to estimate the stability and adaptability of pod and seed yield in runner peanut genotypes based on the nonlinear regression and AMMI analysis. Yield data from 11 trials, distributed in six environments and three harvests, carried out in the Northeast region of Brazil during the rainy season were used. Significant effects of genotypes (G, environments (E, and GE interactions were detected in the analysis, indicating different behaviors among genotypes in favorable and unfavorable environmental conditions. The genotypes BRS Pérola Branca and LViPE‑06 are more stable and adapted to the semiarid environment, whereas LGoPE‑06 is a promising material for pod production, despite being highly dependent on favorable environments.

  2. Mycobacterium bovis: polymerase chain reaction identification in bovine Lymphonode biopsies and genotyping in isolates from Southeast Brazil by spolygotyping and restriction fragment length polymorphism

    Directory of Open Access Journals (Sweden)

    Zanini MS

    2001-01-01

    Full Text Available Diagnosis of the Mycobacterium tuberculosis complex by direct PCR of mediastinal lymphnode DNA and microbiological tests were compared in cattle suspicious of bearing tuberculous-like lesions detected during slaughter. The PCR procedure applied on DNA samples (n=54 obtained by adding alpha -casein into the thiocyanate extraction mix was positive in 70% of the samples. PCR confirmed the identification of 23 samples (100% that grew in culture, 9 samples (60% that failed to grow in culture, plus 6 (37.5% samples that resulted in growth of bacterial contaminants. Genotyping by IS6110-RFLP and DR-spoligotyping analysis of seven samples revealed the presence of several polimorphisms. Seven of the isolates contained multiple copies of IS6110, thus defining the existence of five singular genotypes.

  3. The diversity and distribution of Heliconia (Heliconiaceae in Brazil A diversidade e distribuição de Heliconia (Heliconiaceae

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    John Kress

    1990-07-01

    Full Text Available A review of the phylogenetic relationships of the Zingiberales is presented and the distribution patterns and diversity of Heliconia are discussed. Sixty-five species names have been applied to the heliconias that occur in Brazil. Of these 65 names, 28 are generally recognized synonyms. Of the remaining 37 species of Brazilian Heliconia, some controversy exists over the taxonomic status of at least eight. Two primary areas of distribution of species of Heliconia exist in Brazil: the Amazon basin (21 species and the Atlantic coastal forest (20 species.É apresentada uma revisão filogenética das Zingiberales e os padrões de distribuição geográfica e a diversidade das Heliconia são apresentados. Para o gênero são referidos 65 nomes de espécies dos quais provavelmente 28 sejam sinonímias. Das 37 espécies restantes, existe controvérsia pelo menos para oito delas. Duas áreas de distribuição de espécies de Heliconia são apresentadas para o Brasil: a bacia amazônica (21 espécies e a floresta costeira Atlântica (20 espécies.

  4. Adaptabilidade e estabilidade de genótipos de girassol para a região subtropical do Brasil Adaptability and stability of sunflower genotypes for the sub-tropical region of Brazil

    Directory of Open Access Journals (Sweden)

    Willyam Stern Porto

    2009-12-01

    áveis.The success of sunflower crop in Brazil is associated to the choice of adapted cultivars to different environments. When there are different genotypes answers in different environments, the release of new cultivars can be facilitated by carrying out studies of adaptability and stability of these genotypes to reduce the effects of genotypes x environments interaction. In Brazil, this information become more important, therefore the main cultivars had been developed in others countries, with different soil traits and climate. The objective of this study was to select sunflower genotypes for the sub-tropical region of Brazil. Experimental data from 1999/2000 to 2003/2004 were obtained by the National Sunflower Trials, coordinated by Embrapa Soja. The evaluated traits were grain and oil yields (kg ha-1. It was carried out a study of adaptability and stability of genotypes according to the methods proposed by PORTO et al. (2007, EBERHART & RUSSELL (1966 and ROCHA et al. (2005. Differently from the method of EBERHART & RUSSELL (1966, PORTO et al. (2007 selected genotypes, that despite of its lower overall average in relation to reference standard had good performance in specific environments. This method was more rigorous to select genotypes, when compared with ROCHA et al. (2005. For grain yield, genotype ACA 884 was indicated for general environments, EM 677008, Agrobel 930 and GV 26048 were indicated for favorable environments and ACA 885 for the unfavorable environments. In the same way, for oil yield, ACA 884 had general indication, GV 26048, CF 17, Agrobel 972 and Helio 358 are indicated for favorable environments and HT 01 and ACA 885 for the unfavorable ones.

  5. Spatial distribution and diet of Cephalopholis fulva (Ephinephelidae at Trindade Island, Brazil

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    Flavio do Nascimento Coelho

    2012-01-01

    Full Text Available In this study we analyze the population structure and diet of the coney Cephalopholis fulva at Trindade Island, Brazil, through direct observation with SCUBA diving in 11 reef sites around the Island, up to 50 m deep. Diet was based on 77 individuals collected with speargun. Mean population density and biomass were estimated at 29 individuals/100 m² and 13 kg/100 m², respectively. This species is regularly distributed along the costal environments of the Trindade Island, with no significant differences in densities and biomass detected among the different collection habitats (reef crest, reef slope, and reef plateau. However, significantly higher densities were observed micro-habitats with greater structural complexity, which may offer more shelter and food to C. fulva. Four food item groups were identified from the gut contents of C. fulva: Annelida, Crustacea, Teleostei, and Testudinata. It is the first record of predation of the green turtle Chelonia mydas hatchlings by the coney. Trindade Island seems to present the densest concentration of C. fulva in all Brazilian and Caribbean ecosystems inhabited by this species. Scarcity of competitors, predators, and fishing pressure may explain the high densities observed in the Island.Foram analisadas a estrutura populacional e a dieta do catuá Cephalopholis fulva na Ilha da Trindade, Brasil. Os dados foram obtidos através de censos visuais com mergulho autônomo em 11 locais no entorno da ilha, em profundidades de até 50 m. A dieta e a proporção sexual foram baseadas na análise de 77 indivíduos coletados com arpão. A densidade populacional e biomassa foram estimados em 29 indivíduos/m² e 13 kg/100 m², respectivamente. A espécie apresentou distribuição uniforme nos ambientes costeiros da ilha, não tendo sido registradas diferenças significativa em sua densidade e biomassa entre os diferentes habitats estudados (crista, talude e platô recifal. Entretanto, foi observado prefer

  6. Spatial-temporal distribution of fire-protected savanna physiognomies in Southeastern Brazil

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    Marcelo H.O. Pinheiro

    2010-06-01

    Full Text Available The analysis of the influence of edaphic finer textures, as a facilitating factor for the expansion of forest formations in the absence of fire, was possible thanks to rare characteristics found in a savanna fragment located in the State of São Paulo, Brazil. The total suppression of fire for over four decades, and the occurrence of two savanna physiognomies, cerrado sensu stricto and cerradão, allowed the conduction of this study based on the hypothesis that cerradão, a physiognomy of forest aspect consisting of fire-sensitive tree and shrubs species, is favored by fire absence and higher soil hydric retention capacity. Edaphic samples were collected from a regular grid of 200 m² for the production of isopletic maps of the distribution of clay, fine sand, coarse sand and silt edaphic textures by the geostatistic method of ordinary kriging. Changes in the areas occupied by both savanna physiognomies, defined on the basis of aerial photographs taken over a period of 43 years, were assessed through mean variation rates. Besides corroborating the hypothesis of edaphic hydric retention as a facilitating factor for the expansion of forest physiognomies in savanna areas, we were able to infer the positive influence of higher precipitation on the increase in cerradão expansion rates.A influência de texturas edáficas finas, como fator de facilitação para a expansão de formações florestais sobre áreas savânicas, através da maior retenção hídrica edáfica, na ausência de incêndios, foi possível ser estudada graças às características encontradas em um fragmento savânico com 38,8 ha, situado em Corumbataí (SP. A supressão total do fogo por quatro décadas, e a ocorrência de duas fisionomias, cerrado sensu stricto e cerradão, permitiram a condução deste estudo. Amostras de solo foram coletadas em uma grade regular de 200 m², abrangendo toda a área do fragmento. Foram produzidos mapas iso-pléticos, com a distribuição das

  7. Detection of porcine circovirus genotypes 2a and 2b in aborted foetuses from infected swine herds in the State of São Paulo, Brazil

    OpenAIRE

    de Castro Alessandra MMG; Cruz Taís F; Salgado Vanessa R; Kanashiro Tatiana M; Ferrari Karen L; Araujo João P; Brandão Paulo E; Richtzenhain Leonardo J

    2012-01-01

    Abstract Background Porcine circovirus type 2 (PCV2) has been associated with several disease complexes, including reproductive failure. The aim of this study was to identify the subtypes of PCV2 that are associated with reproductive failure in pigs from the State of São Paulo, Brazil and to investigate co-infections with other infectious organisms. Findings Samples of 168 aborted foetuses or mummified foetuses from five farrow-to-finish swine farms known to be infected with PCV2 and located ...

  8. A review of the ticks (Acari, Ixodida of Brazil, their hosts and geographic distribution - 1. The State of Rio Grande do Sul, Southern Brazil

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    Evans DE

    2000-01-01

    Full Text Available A review of the ticks (Acari, Ixodida of the State of Rio Grande do Sul, southern Brazil, was completed as a step towards a definitive list (currently indicated as 12 of such species, their hosts and distribution. The ticks: Argas miniatus (poultry, Ixodes loricatus (opossums, Amblyomma aureolatum (dogs, A. calcaratum (anteaters, A. cooperi (capybaras, A. nodosum (anteaters, A. tigrinum (dogs (Neotropical and Rhipicephalus sanguineus (dogs (introduced, cosmopolitan, Afrotropical were confirmed as present, in addition to the predominant, Boophilus microplus (cattle (introduced, pan-tropical, Oriental. Of the further 18 species thus far reported in the literature as present in the state, but unavailable for examination: only Ornithodoros brasiliensis (humans and their habitations (Neotropical, Ixodes affinis (deer (Nearctic/Neotropical and I. auritulus (birds (Nearctic/Neotropical/Afrotropical/ Australasian are considered likely; 13 species would benefit from corroborative local data but the majority appear unlikely; reports of A. maculatum (Nearctic/Neotropical, but circum-Caribbean are considered erroneous; the validity of A. fuscum is in doubt. The very recent, first known report of the tropical Anocentor nitens (horses(Nearctic/Neotropical, but still apparent absence of the tropical A. cajennense (catholic (Nearctic/Neotropical and the sub-tropical/temperate Ixodes pararicinus (cattle (Neotropical in Rio Grande do Sul are important for considerations on their current biogeographical distribution and its dynamics in South America. The state has relatively long established, introduced ("exotic", Old World tick species (B. microplus, R. sanguineus that continue to represent significant pests and disease vectors to their traditional, introduced domestic animal hosts, cattle and urban dogs. There are also indigenous, New World ticks (A. miniatus, O. brasiliensis, A. aureolatum, A. nitens, as both long established and possibly newly locally

  9. The spatial distribution of the subtidal benthic macrofauna and its relationship with environmental factors using geostatistical tools: a case study in Trapandé Bay, southern Brazil

    OpenAIRE

    Fernanda M. de Souza; Eliandro R. Gilbert; Maurício G. Camargo; Wagner W. Pieper

    2013-01-01

    Modeling the distribution patterns of the estuarine macrobenthic community has revealed itself as a difficult task due to spatio-temporal heterogeneity. This study uses ordinary kriging and Poisson modeling to generate distribution maps of the subtidal benthic macrofauna in the Trapandé Bay (southeastern Brazil). Samples were taken in duplicate from 36 locations distributed along nine transects perpendicular to the main estuarine axis in October 2006 and March 2007. One-hundred and seventy ta...

  10. Statistical distribution models for migratory fish in Jacuí basin, South Brazil

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    Thaís P. Alves

    2009-01-01

    Full Text Available The aim of the present study was to identify the distribution patterns of migratory fishes in the Jacuí river basin (Rio Grande do Sul, South Brazil, proposing a statistical model of presumed distribution based on geomorphologic environmental data. Through maps of occurrence probability, we hope to contribute to decisions regarding basin environmental management. The analyzed species were: Salminus brasiliensis (dourado, Leporinus obtusidens (piava, Prochilodus lineatus (grumatã and Pimelodus pintado (pintado. Samples were made through interviews with fishermen and local inhabitants, covering the main channel and tributaries of the rivers Jacuí, Taquari-Antas, Vacacaí, Vacacaí-Mirim, Pardo, Pardinho, Sinos, and Caí. The sampling program resulted in 204 interviews, being 187 considered as valid in 155 different sampling points. The probability of migratory fish occurrence was adjusted through the LOGIT routine of the Idrisi Andes Software: P = e(b0 + b1 . altitude + b2 . basin area . (1 + e(b0 + b1 . altitude + b2 . basin area-1, where P is the occurrence probability of the species (0-1 and b0, b1 and b2 are the equation parameters. Model accuracy, for estimating presence, ranged from 82% to 93%. Pimelodus pintado was cited to occur in 121 points among the 155 sampled (78.06%, Prochilodus lineatus in 72 (46.45%, L. obtusidens in 62 (40.00% and S. brasiliensis in 58 (37.42%. Equation parameters were estimated (± standard error as follow: S. brasiliensis: b0 = -2.8762 ± 0.2597; b1 = 1.3028 ± 0.0332; b2 = 1.1487 ± 0.0301; L. obtusidens: b0 = -0.8364 ± 0.2213; b1 = -1.5564 ± 0.0462; b2 = 0.9947 ± 0.0206; Prochilodus lineatus: b0= 0; b1= -1.3067 ± 0.0544; b2= 0.8128 ± 0.0177; Pimelodus pintado: b0= -0.9487 ± 0.3688; b1= -0.8269 ± 0.0496; b2= 0.9255 ± 0.0304.O objetivo do presente estudo foi identificar o padrão de distribuição de peixes migradores da bacia hidrográfica do rio Jacuí (Rio Grande do Sul, Sul do Brasil, propondo um

  11. Key locations for soybean genotype assessment in Central Brazil Locais-chave para avaliação de genótipos de soja na Região Central do Brasil

    Directory of Open Access Journals (Sweden)

    Roberto Miranda Pacheco

    2009-05-01

    Full Text Available The objective of this work was to identify key locations for the establishment of soybean (Glycine max genetic breeding programs, in the Central Region of Brazil. Grain yield data of three maturity groups of soybean genotypes, from regional trials conducted over three years, at 18 locations in Brazilian Cerrado were used. A key location for the early phases of the breeding program was defined as the site that best classifies the winning genotypes in the region. Key locations for the final phases were defined as those sites that best represent each environmental stratum, in relation to the adaptability of the respective winning genotype. This adaptability was estimated by additive main effects and multiplicative interaction (AMMI model analysis, using the distance between the score of each location in a stratum and the score of the winning genotype, which characterizes such stratum in an AMMI biplot. The locations that best classified the winning genotypes over space and time were Mineiros, Placas and Rio Verde. For the final phases of genotype selection, with data from the three maturity group, the recommended locations were: Buritis, Chapadão do Céu, Iraí, Pamplona, Placas, Planaltina, Rio Verde, Sacramento, Senador Canedo, Uberaba, and Uberlândia.O objetivo deste trabalho foi identificar locais-chave para o estabelecimento de programas de melhoramento genético de soja (Glycine max, na Região Central do Brasil. Foram utilizados dados de produtividade de grãos de genótipos de soja, de três ciclos de maturação, obtidos de ensaios regionais conduzidos por três anos em 18 localidades da região. O local-chave para a condução das fases preliminares do programa foi definido como a localidade que melhor classifica os genótipos vencedores na região. Os locais-chave para as fases finais foram definidos como os que melhor representam cada estrato ambiental identificado, em termos da adaptabilidade do respectivo genótipo vencedor. Essa

  12. Simulation of Distributed Generation with Photovoltaic Microgrids—Case Study in Brazil

    Directory of Open Access Journals (Sweden)

    Gustavo Azevedo Xavier

    2015-05-01

    Full Text Available Elevated prices and lack of proper legislation and government incentives have been the main barriers in the development of the photovoltaic market in Brazil. In an attempt to overcome those barriers, a microgrid model was proposed and simulated. In the proposed microgrids, residential consumers are connected to each other to maximize the investment return by trading the surplus of generated energy among them. Different topologies and scenarios were studied from electrical energy and economic standpoints. Stochastic data of solar radiation were simulated for the city of Viçosa, Minas Gerais, Brazil, for the period of one year, considering the statistical behavior of a series over 20 years. The system output power and energy balance were calculated considering a model for photovoltaic generators and the radiation simulated data. By determining the generated energy and electrical needs of the microgrid members, the cash flow and economic feasibility were calculated. Sensitivity analyses were performed by varying economic parameters to determine situations where investment becomes feasible. This paper shows that microgrid contributes to improve the economics and the initial investments. The number of participants in a microgrid, the electricity and the equipment costs are important parameters to speed up the economic and technical feasibility process.

  13. Populational fluctuation and spatial distribution of Alphitobius diaperinus (Panzer) (Coleoptera; Tenebrionidae) in a poultry house, Cascavel, Parana state, Brazil.

    Science.gov (United States)

    Chernaki-Leffer, A M; Almeida, L M; Sosa-Gómez, D R; Anjos, A; Vogado, K M

    2007-05-01

    Knowledge of the population fluctuation and spatial distribution of pests is fundamental for establishing an appropriate control method. The population fluctuation and spatial distribution of the Alphitobius diaperinus in a poultry house in Cascavel, in the state of Parana, Brazil, was studied between October, 2001 and October 2002. Larvae and adults of the lesser mealworm were sampled weekly using Arends tube traps (n = 22) for six consecutive flock grow-outs. The temperature of the litter and of the poultry house was measured at the same locations of the tube traps. Beetle numbers increased continuously throughout all the sampling dates (average 5,137 in the first week and 18,494 insects on the sixth week). Significantly greater numbers of larvae were collected than adults (1 to 20 times in 95% of the sampling points). There was no correlation between temperature and the number of larvae and adults collected, therefore no fluctuation was observed during the sampling period. The population growth was correlated to litter re-use. The highest temperatures were observed in deep litter. The spatial distribution of larvae and adults in the poultry house was heterogeneous during the whole period of evaluation. Results suggest that monitoring in poultry houses is necessary prior to adopting and evaluating control measures due to the great variability of the insect distribution in the poultry house. PMID:17876430

  14. Monitoring and spatial distribution of heterotrophic bacteria and fecal coliforms in the Rodrigo de Freitas Lagoon, Rio de Janeiro, Brazil

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    Lutterbach Márcia T. S.

    2001-01-01

    Full Text Available The distribution of heterothrophic bacteria and fecal coliforms was monitored at four sampling stations located near the shore of the Rodrigo de Freitas Lagoon, in the city of Rio de Janeiro, Brazil. Water samples were collected, monthly from October 1994 through September 1998. The highest heterothrophic count (6.5x10 7 CFU/100mL was recorded at stations 2 and 4 during August 1998 and the lowest (10 ³ CFU/100 mL at station 3 during February 1995. With respect to fecal coliforms, the highest and lowest counts were 1.6x10 5 coliforms/100mL at station 3 during March 1997 and <1 coliform/100mL at all the stations during February 1995 and September 1997 as well as station 3 during February 1998. The data indicated a percentage increase of the microorganisms surveyed over time at all the sampling stations studied.

  15. Evaluation of As, Se and Zn in octopus samples in different points of sales of the distribution chain in Brazil

    International Nuclear Information System (INIS)

    Shellfish such as squid and octopus, class Cephalopoda, has high commercial value in restaurants and for export. As, Se and Zn concentrations were determined in 117 octopus acquired in different points of the distribution chain in 4 coastal cities of Sao Paulo state (Guaruja, Santos, Sao Vicente and Praia Grande)-Brazil. The methodology for elemental determination was Instrumental Neutron Activation Analysis (INAA). The element concentration in the octopus samples (wet weight) range from: 0.184 to 35.4 mg kg-1 for As, 0.203 to 2.26 mg kg-1 for Se and 4.73 to 37.4 mg kg-1 for Zn. Arsenic and Se levels were above the limit for fish established by Brazilian legislation, while Zn concentrations were in accordance with literature values. (author)

  16. Nuclear medicine annual external occupational dose distribution: Rio de Janeiro, Brazil, year 2005.

    Science.gov (United States)

    Mauricio, Claudia L P; Lima, Ana L S; da Silva, Herica L R; Souza-Santos, Denison; Silva, Claudio R

    2011-03-01

    Brazil has about 300 nuclear medicine services (NMS), 44 of them located in the state of Rio de Janeiro (RJ). Most nuclear medicine staff are routinely monitored for external dose. This paper makes a statistical analysis of all the RJ NMS annual external occupational doses in year 2005. Around 100 professionals of RJ NMS received annual doses >4.0 mSv, considering only external doses, but no one receives doses higher than the mean annual dose limit of 20 mSv. Extremities dosemeters are used by about 10 % of the staff. In some cases, these doses are more than 10 times higher than the dose in thorax. The maximum ratio of extremity dose/thorax dose, in 2005, was 72. This study shows the importance to improve radiation protection procedures in nuclear medicine, mainly because the number of occupational individuals in nuclear medicine and their external doses are increasing. PMID:21051433

  17. Nuclear medicine annual external occupational dose distribution: Rio de Janeiro (Brazil), year 2005

    International Nuclear Information System (INIS)

    Brazil has about 300 nuclear medicine services (NMS), 44 of them located in the state of Rio de Janeiro (RJ). Most nuclear medicine staff are routinely monitored for external dose. This paper makes a statistical analysis of all the RJ NMS annual external occupational doses in year 2005. Around 100 professionals of RJ NMS received annual doses >4.0 mSv, considering only external doses, but no one receives doses higher than the mean annual dose limit of 20 mSv. Extremities dosemeters are used by about 10 % of the staff. In some cases, these doses are more than 10 times higher than the dose in thorax. The maximum ratio of extremity dose/thorax dose, in 2005, was 72. This study shows the importance to improve radiation protection procedures in nuclear medicine, mainly because the number of occupational individuals in nuclear medicine and their external doses are increasing. (authors)

  18. Natural gas distribution in Brazil - opportunities of improvement; Distribuicao de gas natural no pais - oportunidades de melhoria

    Energy Technology Data Exchange (ETDEWEB)

    Correa, Silvia R. [PETROBRAS, Rio de Janeiro, RJ (Brazil); Quintella, Odair M.; Farias Filho, Jose R. de [Universidade Federal Fluminense, Niteroi, RJ (Brazil)

    2005-07-01

    Great are the challenges established by the Brazilian Government related to goals to be achieved for the increment of the Natural Gas participation in brazilian energetic matrix, from current 5% to 12%, up to 2010. The enlargement of the distribution infrastructure of the gas (gas-pipelines 'mesh') in Brazil is considered one of the greatest challenges for the growth of the Brazilian market of Natural Gas, accomplishment that involves elevated investments. This paper presents a model of Management System for the good organizational performance of the small Natural Gas Supplying Brazilian Companies focused on criteria of Leadership, Strategies and Plans and Results, established by the Premio TOP Empresarial and by the 'Rumo a Excelencia', held by the 'Progama Qualidade Rio' and 'Fundacao para o Premio Nacional da Qualidade', respectively. The management practices of these companies were reviewed, considering the context of the energetic Brazilian scenario, subjected to the political and operational definitions and uncertainties, the available financial resources, limited or not prioritized, and actual barriers to be surpassed by the Gas Supplying Companies in order to achieve the pre-established government goals for this segment. The implementation of the proposed simplified Model, seen as improvement opportunities for the segment of Natural Gas distribution, will lead the Gas Distribution Companies to a intermediary stage envisioning the real steps towards the excellence of the performance. (author)

  19. Distribution of the type III DNA methyltransferases modA, modB and modD among Neisseria meningitidis genotypes: implications for gene regulation and virulence.

    Science.gov (United States)

    Tan, Aimee; Hill, Dorothea M C; Harrison, Odile B; Srikhanta, Yogitha N; Jennings, Michael P; Maiden, Martin C J; Seib, Kate L

    2016-01-01

    Neisseria meningitidis is a human-specific bacterium that varies in invasive potential. All meningococci are carried in the nasopharynx, and most genotypes are very infrequently associated with invasive meningococcal disease; however, those belonging to the 'hyperinvasive lineages' are more frequently associated with sepsis or meningitis. Genome content is highly conserved between carriage and disease isolates, and differential gene expression has been proposed as a major determinant of the hyperinvasive phenotype. Three phase variable DNA methyltransferases (ModA, ModB and ModD), which mediate epigenetic regulation of distinct phase variable regulons (phasevarions), have been identified in N. meningitidis. Each mod gene has distinct alleles, defined by their Mod DNA recognition domain, and these target and methylate different DNA sequences, thereby regulating distinct gene sets. Here 211 meningococcal carriage and >1,400 disease isolates were surveyed for the distribution of meningococcal mod alleles. While modA11-12 and modB1-2 were found in most isolates, rarer alleles (e.g., modA15, modB4, modD1-6) were specific to particular genotypes as defined by clonal complex. This suggests that phase variable Mod proteins may be associated with distinct phenotypes and hence invasive potential of N. meningitidis strains. PMID:26867950

  20. Prevalence, Genotype Distribution and Risk Factors for Cervical Human Papillomavirus Infection in the Grand Tunis Region, Tunisia.

    Science.gov (United States)

    Ardhaoui, Monia; Ennaifer, Emna; Letaief, Hajer; Salsabil, Rejaibi; Lassili, Thalja; Chahed, Karim; Bougatef, Souha; Bahrini, Asma; El Fehri, Emna; Ouerhani, Kaouther; Paez Jimenez, Adela; Guizani, Ikram; Boubaker, Med Samir; Ben Alaya, Nissaf Bouafif Ép

    2016-01-01

    Implementation of Human Papillomavirus (HPV) vaccination should be considered a key cervical cancer prevention strategy in Tunisia, where Pap smear screening is not efficient. This study aims to estimate the prevalence and to identify risk factors associated with HPV infection among women from Grand Tunis, Tunisia. We conducted a cross-sectional study, between December 2012 and May 2013. Eligible women for this study were those aged 18-65 years, sexually active, who sought medical attention at their primary health care centre or clinic in Grand Tunis, Tunisia and who gave written consent. A liquid-based Pap smear sample was obtained from all women using a cervical brush. Only women with betaglobin positive test were further analysed for HPV detection and typing. A nested-PCR of the L1 region was performed followed by reverse line blot hybridization to facilitate the specific detection of 31 HPV genotypes. Multiple logistic regression modeling was used for the analysis of associations between variables with some considered possible confounders after checking for interactions. A total of 391 women were enrolled in this study and 325 out of the 391 cervical samples were positive for the betaglobin test. Overall HPV prevalence was 13.2% [9.8%-17.5%], with the following most prevalent HPV genotypes: HPV6 (40%), HPV40 (14%), HPV16 (12%), HPV52 (9%), HPV31 and HPV59 (7%), followed by HPV68 (4%). Mean age of HPV positive women was 40.7±0.92 years. Independently associated risk factors of HPV infection were smoking (OR:2.8 [0.8-9.6]), low income (OR:9.6 [1.4-63.4), bad housing type (OR:2.5 [1-6.8]), partner with multiple sexual relationship (OR:4.5 [0.9-22.9]) and single women (widowed, divorced, separated, never married) (OR:6.9 [1.1-42.2]). This study provides the first national-based estimate of HPV prevalence in Tunisia. Our findings contribute to the evidence on the current burden of HPV infection, the critical role of sexual behaviour and socioeconomic status and

  1. Prevalence, Genotype Distribution and Risk Factors for Cervical Human Papillomavirus Infection in the Grand Tunis Region, Tunisia.

    Directory of Open Access Journals (Sweden)

    Monia Ardhaoui

    Full Text Available Implementation of Human Papillomavirus (HPV vaccination should be considered a key cervical cancer prevention strategy in Tunisia, where Pap smear screening is not efficient. This study aims to estimate the prevalence and to identify risk factors associated with HPV infection among women from Grand Tunis, Tunisia. We conducted a cross-sectional study, between December 2012 and May 2013. Eligible women for this study were those aged 18-65 years, sexually active, who sought medical attention at their primary health care centre or clinic in Grand Tunis, Tunisia and who gave written consent. A liquid-based Pap smear sample was obtained from all women using a cervical brush. Only women with betaglobin positive test were further analysed for HPV detection and typing. A nested-PCR of the L1 region was performed followed by reverse line blot hybridization to facilitate the specific detection of 31 HPV genotypes. Multiple logistic regression modeling was used for the analysis of associations between variables with some considered possible confounders after checking for interactions. A total of 391 women were enrolled in this study and 325 out of the 391 cervical samples were positive for the betaglobin test. Overall HPV prevalence was 13.2% [9.8%-17.5%], with the following most prevalent HPV genotypes: HPV6 (40%, HPV40 (14%, HPV16 (12%, HPV52 (9%, HPV31 and HPV59 (7%, followed by HPV68 (4%. Mean age of HPV positive women was 40.7±0.92 years. Independently associated risk factors of HPV infection were smoking (OR:2.8 [0.8-9.6], low income (OR:9.6 [1.4-63.4, bad housing type (OR:2.5 [1-6.8], partner with multiple sexual relationship (OR:4.5 [0.9-22.9] and single women (widowed, divorced, separated, never married (OR:6.9 [1.1-42.2]. This study provides the first national-based estimate of HPV prevalence in Tunisia. Our findings contribute to the evidence on the current burden of HPV infection, the critical role of sexual behaviour and socioeconomic status

  2. Diversity and distribution of aquatic insects in Southern Brazil wetlands: implications for biodiversity conservation in a Neotropical region

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    Leonardo Maltchik

    2012-03-01

    Full Text Available The selection of priority areas is an enormous challenge for biodiversity conservation. Some biogeographic methods have been used to identify the priority areas to conservation, and panbiogeography is one of them. This study aimed at the utilization of panbiogeographic tools, to identify the distribution patterns of aquatic insect genera, in wetland systems of an extensive area in the Neotropical region (~280 000km², and to compare the distribution of the biogeographic units identified by the aquatic insects, with the conservation units of Southern Brazil. We analyzed the distribution pattern of 82 genera distributed in four orders of aquatic insects (Diptera, Odonata, Ephemeroptera and Trichoptera in Southern Brazil wetlands. Therefore, 32 biogeographic nodes corresponded to the priority areas for conservation of the aquatic insect diversity. Among this total, 13 were located in the Atlantic Rainforest, 16 in the Pampa and three amongst both biomes. The distribution of nodes showed that only 15% of the dispersion centers of insects were inserted in conservation units. The four priority areas pointed by node cluster criterion must be considered in further inclusions of areas for biodiversity conservation in Southern Brazil wetlands, since such areas present species from differrent ancestral biota. The inclusion of such areas into the conservation units would be a strong way to conserve the aquatic biodiversity in this region.La selección de áreas prioritarias es un enorme desafío para la conservación de la biodiversidad. Métodos biogeográficos se han utilizado para identificar áreas prioritarias para la conservación, como la panbiogeografía. Este estudio tuvo como objetivo el empleo de herramientas panbiogeográficas, para identificar los patrones de distribución de los géneros de insectos acuáticos, en los sistemas de humedales de una extensa área de la región Neotropical (~280 000km², y así comparar la distribución de las

  3. Spatial distribution of schistosomiasis foci on Itamaracá Island, Pernambuco, Brazil

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    CS Barbosa

    2004-08-01

    Full Text Available Acute cases of schistosomiasis have been found on the coastal area of Pernambuco, Brazil, due to environmental disturbances and disorderly occupation of the urban areas. This study identifies and spatially marks the main foci of the snail host species, Biomphalaria glabrata on Itamaracá Island. The chaotic occupation of the beach resorts has favoured the emergence of transmission foci, thus exposing residents and tourists to the risk of infection. A database covering five years of epidemiological investigation on snails infected by Schistosoma mansoni in the island was produced with information from the geographic positioning of the foci, number of snails collected, number of snails tested positive, and their infection rate. The spatial position of the foci were recorded through the Global Positioning System (GPS, and the geographical coordinates were imported by AutoCad. The software packages ArcView and Spring were used for data processing and spatial analysis. AutoCad 2000 was used to plot the pairs of coordinates obtained from GPS. Between 1998 and 2002 5009 snails, of which 12.2% were positive for S. mansoni, were collected in Forte Beach. A total of 27 foci and areas of environmental risk were identified and spatially analyzed allowing the identification of the areas exposed to varying degrees of risk.

  4. Distribution of Th-232 and Th-228 in Santos and Sao Vicente Estuary, Sao Paulo, Brazil

    Energy Technology Data Exchange (ETDEWEB)

    Silva, P.S.C.; Mazzilli, B.P.; Favaro, D.I.T. [Instituto de Pesquisas Energeticas e Nucleares, Av. Lineu Prestes, 2242, Caixa Postal 05508-000, Cidade Universitaria, Sao Paulo (Brazil)]. e-mail: Pscsilva@ipen.br

    2004-07-01

    In the last decades considerable attention has been given to technologically enhanced natural occurring radioactive material (TENORM). Within this frame, of particular concern is the phosphate fertilizer industry. Santos Basin, located in Southwest Brazil, Sao Paulo State, comprising Santos and Sao Vicente estuarine system, is considered the most important industrial region of the country. Among the industrial activities present, phosphate fertilizer plants are responsible for the production of 69 millions tons of phosphogypsum waste, which is stockpiled in the surrounding environment. This waste concentrates radionuclides of the natural series originally present in the phosphate rock used as raw material. This study aims to evaluate the environmental impact of such activities in the sediments of the estuarine system. {sup 232} Th and {sup 228} Th concentrations in Santos and San Vicente estuary sediments were determined by Neutron activation analysis and Gamma spectrometry, respectively. {sup 232} Th concentration ranged from 6.5 to 198 Bq kg{sup -1} with mean value of 57 {+-} 39 Bq kg{sup -1}, for 42 samples. {sup 228} Th content varied from 12 to 110 Bq kg{sup -1} with a mean value of 74 {+-} 23 Bq kg{sup -1}, for 18 samples. It can be seen that the amount of {sup 232} Th is higher in the rivers close to the phosphogypsum piles, at least five points were identified as being affected by anthropogenic factor. (Author)

  5. Intertidal to subtidal distribution of benthic macrofauna in an estuarine beach of Babitonga Bay, southern Brazil

    Directory of Open Access Journals (Sweden)

    Paulo Roberto Pagliosa

    2006-03-01

    Full Text Available This paper reports on the spatial variation of a macrofaunal community along the intertidalsubtidal gradient of an estuarine beach located at the mouth of Babitonga Bay, in Southern Brazil. The fauna and sediment were sampled at 0, 5, 10, and 20 m depths in three transects. Differences in benthic assemblages among the depths were found to be significant and related to the major local processes of sediment changes. The analysis of taxa composition showed an impoverished community subject to wave action and erosionaccretion dynamics at landward stations (0 and 5 m depths. Seaward macrofauna (10 and 20 m depths inhabiting sediments with higher organic content and poorly-sorted sands were more diverse and numerically dominated by ophiuroids and by cirratulid (Tharyx sp. and maldanid (Clymenella brasiliensis polychaetes. A breakdown in the zonation patterns of environment and community was detected where sediments produced by a creek outlet enabled increasing stability and higher densities of the soft bottom anthozoa Edwardsia sp. and the polychaete Lumbrineris atlantica. Additionally, the sediments with an excessive amount of fine particles were densely colonized (mean of 22,400 individuals.m-2 by C. brasiliensis. The local sediment characteristics were related to maldanid sediment-reworking. The macrofaunal species compositions along the sandy beaches at the mouths of the southern Brazilian estuarine systems were compared.

  6. Chaetognatha of the Brazil-Malvinas (Falkland confluence: distribution and associations

    Directory of Open Access Journals (Sweden)

    Alina M. Crelier

    Full Text Available The planktonic chaetognaths from the Brazil-Malvinas (Falkland confluence, extending between 36º 30' - 50º 5' S and 60º 33' - 41º 7' W, were studied. Ten species were found: Eukrohnia hamata (Möbius, 1875 (Eukrohniidae, Pterosagitta draco (Krohn, 1853 (Pterosagittidae, Sagitta enflata Grassi, 1881, Sagitta gazellae Ritter-Zahony, 1909, Sagitta hexaptera d´Orbigny, 1834, Sagitta lyra Krohn, 1853, Sagitta minima Grassi, 1881, Sagitta planctonis Steinhaus, 1896, Sagitta serratodentata Krohn, 1853, and Sagitta tasmanica Thomson, 1947 (Sagittidae. Sagitta gazellae was the most abundant species followed by E. hamata, S. tasmanica and S. serratodentata. The association analysis among the different species, salinity and temperature revealed two groups of species, one related to higher salinities and warmer waters (P. draco, S. hexaptera and S. serratodentata and the other to lower salinities and colder waters (E. hamata, S. gazellae and S. tasmanica. The fact that P. draco and S. hexaptera, formerly defined as warm-water species, appeared further south than previously reported might be related to the existence of warm core eddies up to 46º S in September and October 1988.

  7. Metal distribution in sediment cores from Sao Paulo State Coast, Brazil

    International Nuclear Information System (INIS)

    Highlights: → Sediment core study in the total fraction. → Elementary composition of sediment for dredged sediment regulation. → Multivariate analysis for determination of basal level of sediment composition. → Importance of the determination of local reference values for sediment studies. - Abstract: Ten sediment core samples with lengths ranging from 35 to 100 cm were collected in the Baixada Santista region and analyzed to determine As, Br, Co, Cr, Cs, Fe, Rb, Sb, Ta, Th, U, Zn and rare earths (Sc, Ce, Eu, La, Lu, Nd, Sm, Tb and Yb) level concentrations using instrumental neutron activation analysis (INAA). The studied region is located in the southeastern coast of Sao Paulo State and is comprised of a densely urbanized area, the largest industrial complex of the country, with a predominance of petrochemical and fertilizer plants. It is also home to Brazil's most important and busiest port. The conclusions found that the As, La, Sm, Ne, Ce, Eu, Hf, Ta, Th, and U elements have a high background level in the region and that Fe and Zn were the main indicators of anthropogenic contribution in the sediments.

  8. Distribution and conservation of three important bird groups of the Atlantic Forest in north-east Brazil.

    Science.gov (United States)

    Pereira, G A; Araújo, H F P; Azevedo-Júnior, S M

    2016-06-27

    The Pernambuco Endemism Center in north-east Brazil has the most fragmented forest cover and the largest number of threatened birds of the whole Atlantic Forest. We analyzed the distribution of three groups of bird species: forest-dependent, endemic and/or threatened using the interpolation method of Inverse Distance Weighting. We also checked the concentration of these birds in protected and unprotected areas, suggesting new sites that need to be protected. The richness concentration of forest-dependent, endemic and/or threatened birds in 123 sites were analysed. There was a greater concentration of the three groups in north Alagoas, south and north Pernambuco, and north and west Paraíba. The distribution of the three groups was almost regular in different vegetation types, although a lower concentration was found in the pioneer formation. There was a greater concentration of birds from all three groups between Pernambuco and Alagoas, and this must be due to the presence of more forest fragments with better structure and vegetation heterogeneity. The protected and unprotected areas hosted important records of endemic and/or threatened birds. We suggested some important places for implementation of new protected areas due to the larger concentrations of the target birds and because they are located within the boundaries of the Important Bird Areas. PMID:27355983

  9. Filling data gaps on the diversity and distribution of Amazonian bats (Chiroptera: the case of Amapá, easternmost Brazil

    Directory of Open Access Journals (Sweden)

    Ana C. M. Martins

    2011-04-01

    Full Text Available Brazil is the second most bat species-rich country in the world, but the information on its species diversity, occurrence and distribution is still heterogeneous and fragmented. None of the Brazilian biomes are well surveyed for bats, but this situation is more critical in Amazonia, an area covering nearly 2/3 of the country. Here we provide updated information on the bats of Amapá, once a data gap in the diversity and distribution of bats in the easternmost Amazonia, and the Guiana Shield as well. Rapid biological assessments (5,551 mistnet.hours were conducted in conservation units and areas of concern, resulting in 1,695 captures, 59 species, 36 genera and six families for the State. New records for the state and for the Guiana Shield area are reported. With our records, 82 species of bats are currently known in Amapá, filling a gap in the knowledge of bat fauna in the Amazon River's delta region.

  10. Diversity and distribution of the bryophyte flora in montane forests in the Chapada Diamantina region of Brazil

    Directory of Open Access Journals (Sweden)

    Emilia de Brito Valente

    2013-09-01

    Full Text Available Bryophytes constitute an important component of tropical rain forests, which provide microhabitats favorable for their establishment. Bryophytes are also quite responsive to changes in microclimate, which makes them good bioindicators. This study aimed to determine the diversity and distribution of bryophytes in upper and lower montane forests of the Chapada Diamantina region of the state of Bahia, Brazil. To that end, we studied community aspects such as richness, diversity, substrates colonized, life forms and floristic similarity between areas and regions. In 2007 and 2008, we collected specimens from six forest sites, located from the north to the south of the Chapada Diamantina region. We identified a total of 205 infrageneric taxa. In comparison with the lower montane forests, the upper montane forests presented higher diversity and species richness, as well as greater numbers of substrates colonized, life form types, species of restricted geographic distribution and species typical of shaded areas. We also found low similarity in the species composition, the populations of the upper and lower montane forests forming two large and distinct groups. Although presenting relatively high floristic homogeneity among themselves, the Chapada Diamantina areas presented little similarity with those of the Atlantic Forest. This can be explained by the differences between the two regions in terms of environmental conditions, precipitation, seasonality, elevation and continentality.

  11. Updating the geographical distribution and frequency of Aedes albopictus in Brazil with remarks regarding its range in the Americas

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    Roberta Gomes Carvalho/

    2014-09-01

    Full Text Available The geographical distribution of Aedes albopictus in Brazil was updated according to the data recorded across the country over the last eight years. Countrywide house indexes (HI for Ae. albopictus in urban and suburban areas were described for the first time using a sample of Brazilian municipalities. This mosquito is currently present in at least 59% of the Brazilian municipalities and in 24 of the 27 federal units (i.e., 26 states and the Federal District. In 34 Brazilian municipalities, the HI values for Ae. albopictus were higher than those recorded for Ae. aegypti, reaching figures as high as HI = 7.72 in the Southeast Region. Remarks regarding the current range of this mosquito species in the Americas are also presented. Nineteen American countries are currently infested and few mainland American countries have not confirmed the occurrence of Ae. albopictus. The large distribution and high frequency of Ae. albopictus in the Americas may become a critical factor in the spread of arboviruses like chikungunya in the new world.

  12. Influence of environmental variables on the distribution of intertidal porcellanid crabs in Sepetiba Bay, Rio de Janeiro, Brazil

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    Luciana A de Mattos

    2014-11-01

    Full Text Available This study aims to assess the distribution patterns of porcellanid crabs in the intertidal zone of Sepetiba Bay, Rio de Janeiro, Brazil, identifying the abiotic determinants. Samples were collected seasonally (dry and rainy seasons from January 2005 to August 2007, during low tides in external, intermediate and internal sectors. The crabs were hand caught in consolidated substrates with sampling effort of two people in three different flood zones (lower, medium and higher for 30 min. Water temperature, salinity, accumulated rainfall, the physical and chemical variables of sediment were analyzed concerning interaction in the distribution patterns of the species. A total of 3,389 crabs, belonging to five genera and eight species, were obtained. With the exception of Petrolisthes armatus, found throughout the intertidal range, all species inhabited the intertidal bottom of Sepetiba Bay exclusively. Favorable environmental conditions of the Sepetiba Bay enabled the success of colonization of several porcellanid species which are a refuge and feeding environment of the Marambaia Island and continental (Junqueira and Ibicuí of the outer zone. The number of species recorded in this study supporting the hypothesis that features of substratum and the availability of food and refuges are factors limiting the establishment of this family in Sepetiba Bay.

  13. Abundance and spatial-temporal distribution of the shrimp Xiphopenaeus kroyeri (Decapoda: Penaeidae): an exploited species in southeast Brazil.

    Science.gov (United States)

    Silva, E R; Sancinetti, G S; Fransozo, A; Azevedo, A; Costa, R C

    2016-04-19

    This study evaluated the abundance and spatial-temporal distribution of the shrimp Xiphopenaeus kroyeri in the coastal region of Macaé, state of Rio de Janeiro, southeastern Brazil. Monthly samples were obtained from March 2008 to February 2010 in six stations located in Inner (5, 10 and 15m depth) and Outer (25, 35 and 45m depth) areas. It was used a commercial fishery boat equipped with an otter-trawl net (3.5 m mouth width, mesh size 20mm and 15mm in the cod end). Water samples were taken for determination of temperature and salinity, and sediment samples for determination of texture and organic matter content. A total of 7146 shrimps were sampled. About 95% of all shrimps were caught in the shallow area, i.e., depths <20m. Greatest abundances were recorded in winter and spring. No significant correlation was observed between sediment (phi) and abundance. The distribution of X. kroyeri in the studied area was closely related to seasonal cold waterfront of the South Atlantic Central Water (SACW) and temperature was the main factor affecting the species abundance. PMID:27097079

  14. Distribution of hepatitis B infection in Brazil: the epidemiological situation at the beginning of the 21 st century

    OpenAIRE

    Francisco José Dutra Souto

    2015-01-01

    Abstract Brazil was formerly considered a country with intermediate hepatitis B endemicity, with large heterogeneity between Brazilian regions and areas of high prevalence, especially in the Amazon basin. Systematic vaccination of children was initiated in 1998. Between 2004 and 2009, a large population-based study reported decreased prevalence in all regions of Brazil. This review analyzed the current hepatitis B epidemiological situation in Brazil through a systematic search of the scientif...

  15. Forest Fires in Southwestern Amazonia During 2005: Extent and Distribution in Eastern Acre State, Brazil

    Science.gov (United States)

    Brown, I.; Moulard, E. M.; Nakamura, J.; Schroeder, W.; Maldonado, M.; Vasconcelos, S. S.; Selhorst, D.

    2007-05-01

    The extended drought in western Amazonia during 2005 provided the conditions for wild fires that spread in old- growth rain forests and cleared areas of the contiguous areas of Madre de Dios, Peru, Acre, Brazil, and Pando, Bolivia, collectively known as the MAP Region. The greatest extent of the wild fires occurred in eastern Acre State with 60,000 km2 of diverse land uses that range from intensely occupied colonization areas, large cattle ranches, extractive and biological reserves and indigenous areas. At the request of the Public Ministry of Acre and other government agencies we analyzed Landsat 5 and CBERS 2 imagery for forests with canopies affected by fires, using visual interpretation and manual digitalization of polygons. Accuracy assessment was done with 180 aerial photos. The total area of forest with canopies affected by fires was 267,000 ha, roughly five times recent annual deforestation rates for Acre State. Omission and commission errors were 28% and 2%, respectively. Burn scars in non-forest areas were determined using ASTER and CBERS 2 imagery via supervised classification. Total open area with burn scars was 203,000 ha. The total of open area and forests affected by fires exceeded 470,000 ha due to three factors: (1) some images used did not include the last weeks of burning; (2) ground fires in forests that did not affect the canopy and therefore were not detected; and (3) concern of the interpreters to avoid commission errors. Of the twelve municipalities of eastern Acre, most affected were Acrelandia, Placido de Castro, Epitaciolandia with >31%, >19% and >17% of the municipality affected, respectively). The largest impact, >114,000 ha, occurred in the Rio Branco Municipality. Similar patterns of burning occurred in Pando and in Madre de Dios. The environmental, social and economic disaster that these fires produced may be a harbinger of future impacts in southwestern Amazonia if current climate predictions prove to be correct.

  16. LEAD DISTRIBUTION BY URBAN SEDIMENTS ON IMPERMEABLE AREAS OF PORTO ALEGRE – RS, BRAZIL

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    Leidy Luz Garcia Martinez

    2010-06-01

    Full Text Available Heavy metals, like lead (Pb, are subproducts of industrial activities; however, in recent years, studies have shown that even in non-industrial areas, elevated concentrations of this element have been found. In this study, Pb concentrations were measured in 20 composite samples of urban sediments collected in an urban watershed of 4.85 km² with three types of soil use (commercial/residential, commercial and industrial in the city of Porto Alegre, RS, Brazil. Concentrations were determined by acid digestion (EPA 3050 of the 209 µm, 150 µm, 90 µm, 63 µm and 45 µm fractions followed by atomic emission spectrophotometry with inductively coupled plasma. Average values of 178.1 µg.g-¹ (± 332; 226.5 µg.g-¹ (± 500; 245.2 µg.g-¹ (± 454.1; 272.4 µg.g-¹ (± 497.3 and 251.5 µg.g-¹ (± 322.6 were obtained in the 209, 150, 90, 63 and 45 µm fractions, respectively. Concentrations of the metals studied were interpolated and represented geographically using Idrisi© Andes. Results show that the greatest concentrations are located in the commercial part of the study area, characterized as presenting high vehicle flow most of the day, with this being considered a potential source of lead. All concentrations were above that of the local background. Studies of this type are important because they make the establishment of control targets possible within sustainable management of water resources, allowing inferences regarding future pollution scenarios of local water resources.

  17. The effectiveness of retreatment with peginterferon alfa and ribavirin in patients with chronic viral hepatitis C genotype 2 and 3: a prospective cohort study in Brazil

    Directory of Open Access Journals (Sweden)

    Artico Simara

    2012-12-01

    Full Text Available Abstract Background More than 50% of patients infected with chronic hepatitis C virus (HCV do not respond to treatment with conventional interferon (IFN combined with ribavirin (RBV. The aim of our study was to evaluate the effectiveness of retreatment with peginterferon alfa-2a or 2b (PEG-IFN 2a or 2b concomitantly with RBV in patients with HCV genotype 2 and 3, which were non-responders or relapsers to initial treatment with IFN / RBV and to identify possible predictors of sustained virological response (SVR. Methods From September 2003 to March 2009 a cohort of 216 patients who had previously failed therapy with a regimen of standard interferon and ribavirin, were followed in a specialized service implemented in the Brazilian Unified Health System, Rio Grande do Sul. All patients were retreated with PEG-IFN 2a or 2b per week, associated with RBV, through oral route, with doses determined according to weight (1,000 mg if weight ≤ 75 Kg and 1,250 mg if ≥ 75 Kg per day for 48 weeks. The HCV-RNA was tested by Polymerase Chain Reaction (PCR. Virological Response (VR within 48 weeks and SVR in the 72 weeks was considered for evaluation of treatment efficacy. Analyses were performed in patients who received at least one dose of PEG-IFN. Results The SVR rate for non-responders to previous treatment was 34.4% and for relapsers was 50% (p = 0.031. As predictive factors that contribute to improve SVR, were identified the age (p = 0.005, to be relapsers to previous treatment (p = 0.023 and present liver biopsy examination Metavir F0-F2 (p = 0.004. In assessing the safety profile, 51 patients (23.6% discontinued treatment prematurely. Conclusions This alternative retreatment for patients who have failed prior therapies for anti-HCV, has demonstrated promising SVR rate, provided that it includes a careful selection of patients with predictors of response and adverse events monitored.

  18. Firm size and productivity. Evidence from the electricity distribution industry in Brazil

    International Nuclear Information System (INIS)

    In this paper we apply Stochastic Frontier Analysis through a distance function to investigate the impact of firm size on productivity development in electricity distribution. We use a sample of seventeen Brazilian firms from 1998 to 2005 and decompose productivity into technical efficiency, scale efficiency and technical change. Moreover, a further step is to decompose the technical change measurement into several components. The results indicate that firm size is important for industry's productivity, and therefore a key aspect to consider when making decisions that affect the market structure in the electricity distribution industry. (author)

  19. Breeding Guild Determines Frog Distributions in Response to Edge Effects and Habitat Conversion in the Brazil's Atlantic Forest.

    Science.gov (United States)

    Ferreira, Rodrigo B; Beard, Karen H; Crump, Martha L

    2016-01-01

    Understanding the response of species with differing life-history traits to habitat edges and habitat conversion helps predict their likelihood of persistence across changing landscape. In Brazil's Atlantic Forest, we evaluated frog richness and abundance by breeding guild at four distances from the edge of a reserve: i) 200 m inside the forest, ii) 50 m inside the forest, iii) at the forest edge, and iv) 50 m inside three different converted habitats (coffee plantation, non-native Eucalyptus plantation, and abandoned pastures, hereafter matrix types). By sampling a dry and a wet season, we recorded 622 individual frogs representing 29 species, of which three were undescribed. Breeding guild (i.e. bromeliad, leaf-litter, and water-body breeders) was the most important variable explaining frog distributions in relation to edge effects and matrix types. Leaf-litter and bromeliad breeders decreased in richness and abundance from the forest interior toward the matrix habitats. Water-body breeders increased in richness toward the matrix and remained relatively stable in abundance across distances. Number of large trees (i.e. DBH > 15 cm) and bromeliads best explained frog richness and abundance across distances. Twenty species found in the interior of the forest were not found in any matrix habitat. Richness and abundance across breeding guilds were higher in the rainy season but frog distributions were similar across the four distances in the two seasons. Across matrix types, leaf-litter species primarily used Eucalyptus plantations, whereas water-body species primarily used coffee plantations. Bromeliad breeders were not found inside any matrix habitat. Our study highlights the importance of primary forest for bromeliad and leaf-litter breeders. We propose that water-body breeders use edge and matrix habitats to reach breeding habitats along the valleys. Including life-history characteristics, such as breeding guild, can improve predictions of frog distributions in

  20. Detection and distribution of rotavirus in raw sewage and creeks in Sao Paulo, Brazil

    Energy Technology Data Exchange (ETDEWEB)

    Mehnert, D.U.; Stewien, K.E. (Univ. of Sao Paulo (Brazil))

    1993-01-01

    Rotavirus invection is an important cause of hospitalization and mortality of infants and children in developing countries, especially where the water supply and sewage disposal systems are in precarious conditions. This report describes the detection, quantitation, and distribution of rotaviruses in domestic sewage and sewage polluted creeks in the city of San Paulo. 22 refs., 1 fig., 3 tabs.

  1. Vertical distribution of 137Cs in the native forest soil at Londrina region (Parana, Brazil)

    International Nuclear Information System (INIS)

    The 137 Cs depth distribution has been studied in several areas in the world and its knowledge is very important to verify its behavior in the soil matrix. The form of 137 Cs depth distribution more observed in an undisturbed soil it is exponential type. In this work, the study of 137 Cs depth distribution was accomplished at three native forests and a coffee yard, built before the 137 Cs fallout, in the region of Londrina (Parana). The sampling was conducted in 1 cm, 2 cm, 4 cm and 5 cm increment depth. The 137 Cs inventory observed for the forests was 248 Bq m-2 (Mata1), 338 Bq m-2 (Mata2) and 325 Bq m-2 (MataUEL). No 137 Cs activity was detected in the coffee yard. The 137 Cs depth distribution for the three forests presented the exponential type. For the soil class of the forests, 137 Cs adsorbed on the soil particles can be considered fixed or slowly exchangeable. (author)

  2. Firm size and productivity. Evidence from the electricity distribution industry in Brazil

    International Nuclear Information System (INIS)

    In this paper we apply Stochastic Frontier Analysis through a distance function to investigate the impact of firm size on productivity development in electricity distribution. We use a sample of seventeen Brazilian firms from 1998 to 2005 and decompose productivity into technical efficiency, scale efficiency and technical change. Moreover, a further step is to decompose the technical change measurement into several components. The results indicate that firm size is important for industry's productivity, and therefore a key aspect to consider when making decisions that affect the market structure in the electricity distribution industry. - Research Highlights: →We apply Stochastic Frontier Analysis through a distance function to investigate the impact of firm's size on productivity development in electricity distribution using a sample of eighteen Brazilian firms from 1998 to 2005. →Productivity is decomposed into technical efficiency, scale-efficiency and technical change. →Firm size is important for the industry's productivity, and therefore a key aspect to consider when making decisions that affect the market structure in the electricity distribution industry.

  3. Spatial distribution and diversity of bird community in an urban area of Southeast Brazil

    Directory of Open Access Journals (Sweden)

    Marco Antônio Manhães

    2005-03-01

    Full Text Available Since the campus of the Federal University of Juiz de Fora, Minas Gerais State, Brazil, has different landscapes, it turns up to be a useful ecological model to evaluate the influence of habitat heterogeneity on bird communities. Our research goals were to know the local avifauna and compare its composition and bird diversity within the different landscapes. Species were identified in point counts without distance estimation, in four habitats: secondary woodlot, lake and surroundings, scrub/abandoned grazing areas and urban areas. One hundred and twenty-one species were identified, but no difference in diversity among the habitats was found. However, analyses indicated the existence of greater similarities among the sampling points belonging to the same kind of habitat. Results suggests that small and isolated forest fragments in urban areas fail to sustain a greater diversity than the adjacent areas, even though the environment's heterogeneous aspect favours local bird richness.O Campus da Universidade Federal de Juiz de Fora possui diferentes paisagens e pode representar um modelo ecológico útil para avaliar a influência da heterogeneidade de hábitats sobre a diversidade de aves. Os objetivos deste trabalho foram conhecer a avifauna local e comparar a composição e diversidade de aves nas distintas paisagens existentes. As espécies foram identificadas em pontos de contagem, em quatro hábitats: mata secundária, lago e arredores, capoeira/pastagem abandonada e urbanizada/jardinada. Foram identificadas 121 espécies, mas não houve diferença de diversidade entre os hábitats. Entretanto, as análises indicaram a existência de maiores similaridades entre os pontos amostrais pertencentes ao mesmo tipo de hábitat. Os resultados sugerem que pequenos fragmentos de mata fortemente isolados em áreas urbanas não sustentam uma diversidade maior do que as áreas adjacentes mas o aspecto heterogêneo do ambiente pode favorecer a riqueza de aves

  4. Prenatal pesticide exposure and PON1 genotype associated with adolescent body fat distribution evaluated by dual X-ray absorptiometry (DXA).

    Science.gov (United States)

    Tinggaard, J; Wohlfahrt-Veje, C; Husby, S; Christiansen, L; Skakkebaek, N E; Jensen, T K; Grandjean, P; Main, K M; Andersen, H R

    2016-07-01

    Many modern pesticides have endocrine disrupting abilities and early-life exposure may affect growth and disease risk later in life. Previously, we reported associations between prenatal pesticide exposure and higher childhood body fat content measured by anthropometry. The associations were affected by child PON1 Q192R genotype. We aimed to study whether prenatal pesticide exposure was still associated with body fat content and distribution in the children at puberty and the potential impact of both maternal and child PON1 Q192R genotype. In this prospective cohort study of 247 children born by occupationally exposed or unexposed women (greenhouse workers and controls) two follow-up examinations (age 10-15 and 11-16 years) including simple anthropometry, skinfold measurements, pubertal staging and blood sampling were performed. Total and regional fat% was determined by dual X-ray absorptiometry (DXA) at age 10-15. Prenatal pesticide exposure was associated with increased total, android, and gynoid fat percentage (DXA) at age 10-15 years after adjustment for sex, socioeconomic status, and puberty (all β = 0.5 standard deviation score (SDS) p sex, the associations were significant in girls (total fat: β = 0.7 SDS, android-gynoid ratio: β = 0.1, both p < 0.05), but not in boys. Carrying the R-allele (child or mother, separately, or both) augmented the differences between exposed and unexposed children (total fat: β = 1.0 SDS, β = 0.8 SDS, p < 0.05, respectively, and β = 1.2 SDS, p < 0.01). No exposure-related differences were found if either the child or mother had the QQ wild-type. At age 11-16, exposed children tended to have a higher total fat% estimated by skinfolds than unexposed children (p = 0.06). No significant associations between prenatal exposure and body mass index or waist circumference were found. Prenatal pesticide exposure was associated with higher adolescent body fat content, including android fat deposition

  5. Sodium and Potassium Absorption and Distribution in Relation to Growth and Internal Potassium Use Efficiency of K-efficient and -inefficient rice genotypes

    Institute of Scientific and Technical Information of China (English)

    2001-01-01

    A pot experiment with two rice (Oriza sativa L.) genotypes differing in internal potassium use efficiency (IKUE) was conducted under different sodium (Na) and potassium (K) levels. Adding NaC1 at a proper level enhanced rice vegetative growth and increased grain yield and IKUE under low potassium. Addition of higher rate of NaC1 had a negative effect on the growth of the K-efficient rice genotype, but did not for the K-inefficient genotype. Under low-K stress, higher NaC1 decreased IKUE of the K-efficient rice genotype but increased IKUE for the K-inefficient genotype. At tillering stage and under low-K stress, adding NaCl increased K and Na contents and decreased the ratio of K/Na for both genotypes. At harvesting stage under low-K stress, adding NaG1 increased K and Na contents and K/Na ratio for the K-efficient genotype but decreased the K/Na ratio for the K-inefficient genotype. The accumulated Na was mostly deposited in the roots and sheaths. At tillering stage, the K and Na contents and the K/Na ratios in different parts for both genotypes decreased in the following sequence: K+ in sheaths > K+ in blades > K+ in roots; Na+ in roots > Na+ in sheaths > Na+ in blades; and K/Na in sheaths 》 K/Na in roots. The K-efficient genotype had a lower K/Na ratio in roots and sheaths than the K-inefficient genotype under low-K stress. At harvesting stage, K and Na contents in grains were not affected, whereas K/Na ratio in the rice straws was increased for the K-efficient genotype but decreased for the K-inefficient genotype by Na addition. However, this was not the case under K sufficient condition.

  6. Two Distinct Hepatitis C Virus Genotype 1a Clades Have Different Geographical Distribution and Association With Natural Resistance to NS3 Protease Inhibitors.

    Science.gov (United States)

    De Luca, Andrea; Di Giambenedetto, Simona; Lo Presti, Alessandra; Sierra, Saleta; Prosperi, Mattia; Cella, Eleonora; Giovanetti, Marta; Torti, Carlo; Caudai, Cinzia; Vicenti, Ilaria; Saladini, Francesco; Almi, Paolo; Grima, Pierfrancesco; Blanc, Pierluigi; Fabbiani, Massimiliano; Rossetti, Barbara; Gagliardini, Roberta; Kaiser, Rolf; Ciccozzi, Massimo; Zazzi, Maurizio

    2015-04-01

    Background.  Hepatitis C virus (HCV) genotype 1 is the most prevalent worldwide. Subtype 1a, compared with 1b, shows lower response rates and higher propensity to select for drug resistance to NS3 and selected NS5A and nonnucleoside NS5B inhibitors. Two distinct clades of subtype 1a have been described. Methods.  Using Bayesian methodology, we performed a time-scaled phylogeny reconstruction of clade separation and characterized the geographic distribution, phylodynamics, and association with natural resistance variants of NS3 sequences from 362 patients carrying subtype 1a HCV. Results.  All sequences segregated in 2 clearly distinct clades. Clade I showed an earlier origin from the common ancestor compared with clade II. Clade I virus was more prevalent in non-European countries, represented mostly by United States, compared with European (75.7% vs 49.3%; P < .001). The prevalence of the natural NS3 variant Q80K, associated with resistance to the macrocyclic protease inhibitor simeprevir, was detected in 51.6% of clade I and 0% of clade II (P < .001); clade I showed a lower genetic barrier for Q80K, whereas no sign of selective pressure at any protease inhibitor resistance-associated codon was detected. Conclusions.  Hepatitis C virus subtype 1a clades have a clearly different distribution in Europe and the United States, and the natural resistance mutation Q80K is exclusively associated with clade I. PMID:26213689

  7. Distribution of superantigens in group A streptococcal isolates from Salvador, Brazil

    OpenAIRE

    Berman, Hillary F; Tartof, Sara Yee; Reis, Joice N; Reis, Mitermayer G.; Lee W Riley

    2014-01-01

    Background Group A streptococcus (GAS) causes invasive disease, superficial disease, and can asymptomatically colonize humans. Superantigens are one virulence factor found in GAS. Previous studies found associations between the genes that encode superantigens and emm type of GAS. It is unknown if these associations are due to underlying biological factors that limit the distribution of superantigens or, alternatively, if these associations are due to the expansion of local GAS linages where t...

  8. Identification of Cryptosporidium species and genotypes in dairy cattle in Brazil Identificação de espécies e genótipos de Cryptosporidium em bovinos leiteiros no Brasil

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    Flavio Medeiros Paz e Silva

    Full Text Available In this study, we identified Cryptosporidium species and genotypes present in dairy cattle in the central region of São Paulo state, Brazil. Fecal specimens were collected from 200 animals (100 calves and 100 cows in ten dairy farms. Fecal samples were examined using microscopic examination (ME, enzyme immunoassay (EIA and polymerase chain reaction (PCR. Cryptosporidium species and genotypes were determined by restriction fragment length polymorphism (RFLP or DNA sequencing analysis of the SSU-rRNA and GP60 genes. The occurrence of Cryptosporidium spp. infection was 14% (28/200. The occurrence in calves (26% was significantly higher than in cows (2%. Of the 27 Cryptosporidium-positive specimens submitted to genotyping, C. andersoni was identified in 23 (85.1%, C. bovis in three (11.1%, and the zoonotic C. parvum subtype IIaA15G2R1 in one (3.7%. The study demonstrates that Cryptosporidium spp. infection was common and widespread in dairy cattle in this region and that calves have a high prevalence of C. andersoni. Furthermore, the presence of C. parvum subtype IIaA15G2R1 indicates that dairy calves from this region should be considered a potential source of zoonotic Cryptosporidium oocysts.No presente estudo foram identificadas espécies e genótipos de Cryptosporidium originadas de bovinos leiteiros na região central do estado de São Paulo, Brasil. Amostras fecais foram coletadas de 200 animais (100 bezerros e 100 vacas em 10 propriedades leiteiras. As amostras foram examinadas utilizando os métodos de microscopia óptica (MO, ensaio imunoenzimático (EI e reação em cadeia da polimerase (PCR. As espécies e genótipos de Cryptosporidium foram determinados pelo método de polimorfismo no tamanho dos fragmentos de restrição (RFLP ou sequenciamento dos genes SSU-rRNA e GP60. A infecção por Cryptosporidium spp. teve ocorrência de 14% (28/200. A ocorrência em bezerros (26% foi significativamente maior do que em vacas (2%. Do total de 27

  9. Spatial distribution and enteroparasite contamination in peridomiciliar soil and water in the Apucaraninha Indigenous Land, southern Brazil.

    Science.gov (United States)

    da Silva, Joseane Balan; Piva, Camila; Falavigna-Guilherme, Ana Lúcia; Rossoni, Diogo Francisco; de Ornelas Toledo, Max Jean

    2016-04-01

    The prevalence and distribution of soil and water samples contaminated with enteroparasites of humans and animals with zoonotic potential (EHAZP) in Apucaraninha Indigenous Land (AIL), southern Brazil, was evaluated. An environmental survey was conducted to evaluate the presence of parasitic forms in peridomiciliary soil and associated variables. Soil samples were collected from 40/293 domiciles (10 domiciles per season), from November 2010 to June 2011, and evaluated by modified methods of Faust et al. and Lutz. Analyses of water from seven consumption sites were also performed. The overall prevalence of soil samples contaminated by EHAZP was 23.8 %. The most prevalent parasitic forms were cyst of Entamoeba spp. and eggs of Ascaris spp. The highest prevalence of contaminated soil samples was observed in winter (31 %). The probability map obtained with geostatistical analyses showed an average of 47 % soil contamination at a distance of approximately 140 m. The parasitological analysis of water did not detect Giardia spp. or Cryptosporidium spp. and showed that all collection points were within the standards of the Brazilian law. However, the microbiological analysis showed the presence of Escherichia coli in 6/7 sampled points. Despite the low level of contamination by EHAZP in peridomiciliar soil and the absence of pathogenic protozoa in water, the AIL soil and water (due to the presence of fecal coliforms) are potential sources of infection for the population, indicating the need for improvements in sanitation and water treatment, in addition periodic treatment of the population with antiparasitic. PMID:26960764

  10. Stratigraphical discontinuities, tropical landscape evolution and soil distribution relationships in a case study in SE-Brazil

    Directory of Open Access Journals (Sweden)

    M. Cooper

    2002-09-01

    Full Text Available On a regional summit surface in the county of Piracicaba (SP within the Peripheric Depression of São Paulo, formed of discontinued flattened tops, there is an abrupt transition between a Typic Hapludox and a Kandiudalfic Eutrudox, together with two stoneline layers. Using stratigraphical, mineralogical, and cartographic studies, this transition and the soil distribution of this surface were studied, correlating them with the different parent materials and the morphoclimatic model of landscape evolution in Southeastern Brazil. The Typic Hapludox was formed on a sandy Cenozoic deposit (Q that overlies a pellitic deposit of the Iratí formation (Pi, representing a regional erosive discordance. Westwards to the Piracicaba River, this sequence is interrupted by a diabase sill overlain by a red clayey material which gave origin to the Kandiudalfic Eutrudox. Two post-Permian depositional events were identified by the two stonelines and stratigraphical discontinuities. The first event generated the deposition of a sandy sediment in the form of levelled alveoluses on regional barriers, most of these formed by dikes and diabase sills, probably during a drier phase. The second depositional event, leading to the deposition of the red clay was probably the dissection of the previously formed pediplane during a humid climate, followed by another pedimentation process during a later, drier period.

  11. Thermal Niches of Two Invasive Genotypes of the Wheat Curl Mite Aceria tosichella: Congruence between Physiological and Geographical Distribution Data

    Science.gov (United States)

    2016-01-01

    The wheat curl mite (WCM), Aceria tosichella Keifer, is a major pest of cereals worldwide. It is also a complex of well-defined genetic lineages with divergent physiological traits, which has not been accounted for in applied contexts. The aims of the study were to model the thermal niches of the two most pestiferous WCM lineages, designated MT-1 and MT-8, and to assess the extent to which temperature determines the distribution of these lineages. WCM population dynamics were modeled based on thermal niche data from March to November on the area of Poland (>311,000 km2). The most suitable regions for population development were predicted and compared to empirical field abundance data. Congruence between modeled parameters and field data for mite presence were observed for both WCM lineages although congruence between modeled thermal suitability and mite field abundance was observed only for MT-8. Thermal niche data for MT-1 and MT-8 provide biological insights and aid monitoring and management of WCM and the plant viruses it vectors. The presented models accurately estimate distributions of WCM and can be incorporated into management strategies for both current and predicted climate scenarios. PMID:27123590

  12. Radiopharmacy education in Brazil

    OpenAIRE

    Ralph Santos-Oliveira; Marta De Souza Albernaz

    2014-01-01

    The number of schools of pharmacy has been increasing each year in Brazil. From 2002 to 2013 over 300 new schools were opened in Brazil with a final number of 415 schools of pharmacy in operation around the country. Of these schools, only 28 schools offer a course in radiopharmacy (7.77%). However, the demand for such trained professionals has grown exponentially in Brazil, especially following amendment 49 (February 2006) that broke the monopoly on the production, distribution, and marketing...

  13. Global distribution of polymorphisms associated with delayed Plasmodium falciparum parasite clearance following artemisinin treatment: genotyping of archive blood samples.

    Science.gov (United States)

    Murai, Kenji; Culleton, Richard; Hisaoka, Teruhiko; Endo, Hiroyoshi; Mita, Toshihiro

    2015-06-01

    The recent emergence and spread of artemisinin-resistant Plasmodium falciparum isolates is a growing concern for global malaria-control efforts. A recent genome-wide analysis study identified two SNPs at genomic positions MAL10-688956 and MAL13-1718319, which are linked to delayed clearance of parasites following artemisinin combination therapy (ACT). It is expected that continuous artemisinin pressure will affect the distribution of these SNPs. Here, we investigate the worldwide distribution of these SNPs using a large number of archived samples in order to generate baseline data from the period before the emergence of ACT resistance. The presence of SNPs in MAL10-688956 and MAL13-1718319 was assessed by nested PCR RFLP and direct DNA sequencing using 653 global P. falciparum samples obtained before the reported emergence of ACT resistance. SNPs at MAL10-688956 and MAL13-1718319 associated with delayed parasite clearance following ACT administration were observed in 8% and 3% of parasites, respectively, mostly in Cambodia and Thailand. Parasites harbouring both SNPs were found in only eight (1%) isolates, all of which were from Cambodia and Thailand. Linkage disequilibrium was detected between MAL10-688956 and MAL13-1718319, suggesting that this SNP combination may have been selected by ACT drug pressure. Neither of the SNPs associated with delayed parasite clearance were observed in samples from Africa or South America. Baseline information of the geographical difference of MAL10-688956 and MAL13-1718319 SNPs provides a solid basis for assessing whether these SNPs are selected by artemisinin-based combination therapies. PMID:25449286

  14. Distribution and phenotypic and genotypic detection of a metallo-β-lactamase, CphA, among bacteraemic Aeromonas isolates.

    Science.gov (United States)

    Wu, Chi-Jung; Chen, Po-Lin; Wu, Jiunn-Jong; Yan, Jing-Jou; Lee, Chin-Chi; Lee, Hsin-Chun; Lee, Nan-Yao; Chang, Chia-Ming; Lin, Yu-Tzu; Chiu, Yen-Cheng; Ko, Wen-Chien

    2012-05-01

    The objectives of the study were to investigate the distribution of cphA-related genes (cphA) encoding a CphA metallo-β-lactamase (MBL) among 51 consecutive Aeromonas blood isolates and to compare different phenotypic methods for detecting CphA. The presence of cphA was detected by PCR. Four phenotypic methods, the imipenem-EDTA combined disc test, imipenem-EDTA MBL Etest, agar dilution test and modified Hodge test (MHT), were used to detect imipenem susceptibility and MBL production. The results showed that 35 (69%) blood isolates had cphA. All (100%) of 16 Aeromonas aquariorum isolates and 12 Aeromonas veronii isolates, and 4 (80%) of 5 Aeromonas hydrophila isolates, carried cphA, but none of 15 Aeromonas caviae isolates did. With the standard inocula, irrespective of the presence or absence of cphA, all but one (50, 98%) isolates were susceptible to imipenem tested by disc diffusion, Etest and agar dilution (10(4) c.f.u. spot inocula), and did not exhibit MBL production by the imipenem-EDTA combined disc test and MBL Etest. By the agar dilution test using large inocula (10(7) c.f.u.), 34 (97%) of 35 cphA(+) isolates had imipenem MICs of ≥16 µg ml(-1), higher than the susceptible breakpoint (4 µg ml(-1)), and demonstrated positive results for the MHT, while one cphA(+) and all 17 cphA(-) isolates had imipenem MICs of ≤4 µg ml(-1). In conclusion, the distribution of cphA among aeromonads is species-specific, found in A. aquariorum, A. veronii and A. hydrophila, and the MHT may be a phenotypic screening test for CphA production. PMID:22322339

  15. Diversity and distribution of oligochaetes in tropical forested streams, southeastern Brazil

    Directory of Open Access Journals (Sweden)

    Luciana Falci Theza Rodrigues

    2015-01-01

    Full Text Available The distribution and beta diversity of oligochaete assemblages were investigated in different spatial scales to verify the influence of environmental factors and geographic distance on their structure. Two types of mesohabitats (riffles and pools were sampled in eight first-order streams located in four preservation areas (Poço D’Anta Municipal Biological Reserve, Santa Cândida Municipal Biological Reserve, Ibitipoca State Park and a private farm called Fazenda Floresta and two Atlantic Forest phytophysiognomies (Seasonal Semideciduous Forest and Rocky Field. Variations in the taxon richness, abundance and composition of the oligochaete assemblages occurred between streams and phytophysiognomies, but not between riffles and pools in the same stream. Low beta diversity values were found and both turnover and nestedness contributed similarly in the environments studied, which could have occurred because of the high capability of oligochaetes to adapt to different environmental conditions. Although the canonical correspondence analysis explained 85.5% of the data (first three axes, the partial Mantel test showed greater influence of geographic distance on the faunal composition than the environmental variables measured. Simple linear regression confirmed this result and showed that the decay of similarity increased with distance between streams. The information from this study sheds light on how environmental and spatial factors determine the variation in the distribution and diversity of oligochaetes in forested low-order streams.

  16. Serotype Distribution and Antimicrobial Resistance of Streptococcus pneumoniae prior to Introduction of the 10-Valent Pneumococcal Conjugate Vaccine in Brazil, 2000-2007: Pneumococcal Serotypes Prior to Conjugate Vaccine Introduction

    OpenAIRE

    Menezes, Ana Paula de O.; Campos, Leila C.; dos Santos, Milena S.; Azevedo, Jailton; dos Santos, Renan Cardoso Nery; Carvalho, Maria da Gloria S.; Beall, Bernard W.; Martin, Stacey W.; Salgado, Katia; Reis, Mitermayer G.; Ko, Albert I.; Reis, Joice N

    2010-01-01

    This study describes the serotype distribution and antibiotic resistance patterns among 397 S. pneumoniae meningitis case isolates recovered in Salvador, Brazil, during the period of 2000-2007, before introduction of the 10-valent pneumococcal conjugate vaccine.

  17. Modern Diatom Distributions in Guanabara Bay Sediment and Oceanic Areas, Rio de Janeiro (Brazil

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    Frederico S. Silva

    2011-01-01

    Full Text Available One hundred and fifty three superficial sediments were collected in Guanabara Bay to physical-chemistry and diatom analyses in the ambit to Monitoring Project (CENPES/PETROBRAS. A total of 146 taxa of diatoms were identified where the most frequent taxa in Guanabara Bay were Amphora spp., Coscinodiscus spp. and Navicula yarrensis var. yarrensis. These species are potentially harmful that might harm fisheries and mariculture during blooms. The values of ecological indexes like richness and diversity followed the estuarine gradient were the higher values were found in the mouth and de low in the inner part. The multivariate analyzes permitted recognize seven diatom assemblages in the bay. The DCA analyze shows the most influence in the distribution of assemblages were the depth and pH. The diatom assemblages analyze proved to be an efficient tool in the environmental diagnosis of Guanabara Bay.

  18. Spatial distribution of neutron flux in geological larger sample analysis at CDTN/CNEN, Brazil

    International Nuclear Information System (INIS)

    Iron monitor wire was used to evaluate the neutron flux gradients inside 5 g-geological sample during irradiation. The spatial distribution for thermal flux was about 2 %/cm for radial and axial gradients and about 5 %/cm for radial and 2.5 %/cm for axial gradients for fast neutrons. The results were evaluated using reference material IAEA-SOIL-7 analysed as small and larger samples and tested with calculating En numbers. This test pointed out that all results were consistent within a 95 % confidence interval. The contribution of the neutron flux gradients may be reduced for larger sample using the standard procedure of the k0-instrumental neutron activation analysis. (author)

  19. HPV genotypes in invasive cervical cancer in Danish women

    DEFF Research Database (Denmark)

    Kirschner, Benny; Junge, Jette; Holl, Katsiaryna;

    2013-01-01

    Human papillomavirus (HPV) genotype distribution in invasive cervical cancers may differ by geographic region. The primary objective of this study was to estimate HPV-genotype distribution in Danish women with a diagnosis of invasive cervical cancer.......Human papillomavirus (HPV) genotype distribution in invasive cervical cancers may differ by geographic region. The primary objective of this study was to estimate HPV-genotype distribution in Danish women with a diagnosis of invasive cervical cancer....

  20. Elemental and radionuclides distribution in the production and use of phosphate fertilizers in Brazil

    International Nuclear Information System (INIS)

    Fertilizer is considered an essential component for agriculture, because its use increases the natural soil nutrients, which are lost slow waste or erosion. The Brazilian phosphate fertilizer is obtained by wet reaction of igneous phosphate rock with concentrated sulphuric acid, giving as final product, phosphoric acid and dihydrated calcium sulphate (phosphogypsum) as by-product. Phosphoric acid is the starting material for triple superphosphate (TSP), single superphosphate (SSP), monoammonium phosphate (MAP) and diammonium phosphate (DAP). The phosphate rock used as raw material presents in its composition, radionuclides of the U and Th natural series in. During the chemical attack of the phosphate rock, this equilibrium is disrupted and the radionuclides and the elements migrate to intermediate, final products and byproducts, according to their solubility and chemical properties. While the fertilizers are commercialized, the phosphogypsum is disposed in stack piles and can cause an impact in the environment. In order to evaluate the radionuclides and the elements distribution in the industrial process of phosphate fertilizer production, samples of concentrated rock, fertilizers (SSP, TSP, MAP and DAP) and phosphogypsum from three national industries (A, B and C), were analyzed. The characterization of the elements Ba, Co, Cr, Fe, Hf, Na, Sc, Ta, Th, U, Zn and Zr, and the rare earths La, Ce, Nd, Sm, Eu, Tb, Yb and Lu, were performed by instrumental neutron activation analysis. The results obtained showed that, in general, the rare earth elements are distributed uniformly in the fertilizers and phosphogypsum, except for Lu. The elemental concentration present in the fertilizers SSP and TSP are of the same order of magnitude of the source rock. The same behavior was observed in the fertilizers MAP and DAP, except for the elements Co, Sc and U. The radionuclides of the U series (238U, 234U, 230Th, 226Ra, 210Pb) and of the Th series (232Th, 228Ra, 228Th) and 40K were

  1. Vertical distribution of benthic marine organisms on rocky coasts of the Fernando de Noronha archipelago (Brazil

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    Verena Rapp de Eston

    1986-01-01

    Full Text Available Qualitative samples of flora and fauna were collected in several points, from the supralittoral fringe down to 30 m, using mainly aqualungs. Species distribution and abundance were determined along four transects, up to 200 m long, in selected places. Samples were taken from 25 x 25 cm quadrats positioned at fixed intervals along the transects down to a variable depth, depending on algal percentage cover and their substrate. The intertidal zone was populated essentially by molluscs. The subtidal was covered predominantly by macroalgae. Montastrea cavernosa, Siderastrea stellata and Mussismillia hispida were the only animal species with a significant percentage cover within the quadrats. Dictyopteris justii, D. plagiograma, Dictyota cervicornis, D. linearis, D. mertensii, Sargassum platycarpum, Sargassum sp, and Stypopodium zonale were the plants with the highest biomass and/or percentage cover, along with Amphiroa fragilissima, Caulerpa verticillata, and crustose corallines. The scarcity of sea urchins, along with the dominance of algae known to produce chemical feeding deterrents or to have a calcareous nature, points towards a strong pressure by predators, with fishes probably playing a key role in the maintenance of the structure of this subtidal community.

  2. An assessment of electricity and income distributional trends following rural electrification in poor northeast Brazil

    International Nuclear Information System (INIS)

    Rural electrification is considered to be a key strategy for poverty alleviation and sustainable development. It should therefore include (1) expanding electricity access and (2) enable new consumers to increase their electricity consumption. In this paper we ask how Brazil’s recent rural electrification efforts have managed to reach these objectives. A new method to measure energy and income equity is presented which uses estimations of non-parametric density curves for the analysis of energy and income distributional trends following electrification. By applying our method to a panel data set from two Brazilian states situated in the country’s poor northeast region we find that (1) rural consumers take up electricity consumption after electrification, and that (2) low consumption levels give way to higher electricity consumption levels after only a few years. This indicates immediate social benefits for households through consumption of electricity services. However, our analysis cannot verify a direct link between electricity use and rural income generation in the short term. The results emphasize the need for government and other actors to integrate rural electrification into broader rural development strategies in order to enable long-term welfare increases through electricity use. - Highlights: ► Comprehensive analysis of Brazil’s recent rural electrification efforts. ► New methodology to analyze energy and income equity trends ex post electrification. ► Analysis indicates immediate social benefits for electrified households. ► We cannot establish a direct link between electricity use and income in the short-run. ► Electrification thus should be integrated in long-term rural development strategies.

  3. Sodium and Potassium Absorption and Distribution in Relation to Growth and Internal Potassium Use Efficiency of K—efficient and—inefficient rice genotypes

    Institute of Scientific and Technical Information of China (English)

    LIUJIANXIANG; YANGXIAOE; 等

    2001-01-01

    A pot experiment with two rice(Oriza saiva L.)genotypes differing in internal potassium use efficiency (IKUE) was condcucted under different sodium( Na) and potassium(k) levels.Addin NaCl at a proper level enhanced rice vegetative growth and increased grain yield and IKUE under low potassium Addition of higher rate of NaCl had a negative effect on the growth of the K-efficient rice genotype,but did not fro the K-inefficient genotype.Under low-K stress,higher NaCl decreased IKUE of the K-efficient rices genotype but increased IKUE for the K-inefficient genotype,At tillering stage and under low-K stress,adding NaCl increased K and Na contents and decreased the ration of K/Na both genotypes ,At harvesting stage under low-K stress,adding NaCl increased K and Na contents and K/Na ratio for the K-efficient genotype but decreased the K/Na ratio for the K=inefficient genotype.The accumulated Na was mostly deposited in the roots and sheaths ,At tillering stage,the K and Na contents and the K/Na ratios in different parts for both genotypes decreased in the following sequence:K+ in sheaths >K+ in blades>K+ in roots;Na+ in roots >Na+ in sheaths>Na+ in blades;and K/Na in sheaths ≥K/Na in roots.The K-effcient genotype had a lower K/Na ratio in roots and sheaths than the K-inefficient genotype under low-K stress,At harvesting stage,K and Na contents in grains were not affected ,hereas K/Na ratio in the rice straws was increased for the K-efficient genotype but decreased for the K-inefficient genotype by Na addition.However,this was not the case under K sufficient condition.

  4. Vertical and horizontal distribution of pollination systems in cerrado fragments of central Brazil

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    Fernanda Quintas Martins

    2007-05-01

    Full Text Available In fragments of the cerrado, we determined the frequency of pollination systems and analyzed their spatial distribution. We placed 38 transects, sampling 2,280 individuals and 121 species. As expected in Neotropical regions, bee-pollination was the most frequent pollination system. We found a decrease in the frequency of plants pollinated by beetles towards the fragment interior. Similarly, we found significant variation in relation to height just for the bats; there was an increase in the frequency of plants pollinated by bats towards the higher heights. In general, we found no horizontal and vertical variation in the pollination systems, probably as consequence of the more open physiognomy of the cerrado vegetation.As principais pressões seletivas nas estratégias de polinização originam principalmente do ambiente em que plantas ocorrem, como subdossel, dossel, borda ou interior de um fragmento. Diferentes condições ambientais aumentam as diferenças entre os nichos ecológicos e podem implicar diferenças nas proporções dos sistemas de polinização. Em fragmentos de cerrado, determinamos a freqüência dos sistemas de polinização e analisamos sua distribuição espacial. Lançamos 38 transecções aleatoriamente, amostrando 2.280 indivíduos e 121 espécies. Como esperado para regiões neotropicais, a polinização por abelhas foi o sistema de polinização mais freqüente. Encontramos uma diminuição na freqüência de plantas polinizadas por besouros em direção ao interior do fragmento. De modo similar, encontramos uma variação significativa em relação à altura somente para os morcegos, havendo um aumento na freqüência de plantas em direção a alturas mais altas. Em geral, não encontramos variações horizontais e verticais nos sistemas de polinização, provavelmente, como conseqüência da fisionomia mais aberta de cerrado.

  5. Avaliação de genótipos de pimentão no período de inverno, em Araguari, MG Genotypic evaluation of sweet pepper in the winter season in Araguari, MG, Brazil

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    José Ricardo Peixoto

    1999-10-01

    Full Text Available Desenvolveu-se um trabalho de pesquisa na Fazenda Jordão em Araguari, MG (18º38'30" S e 48º11'18" O, na época do inverno, com o objetivo de verificar o desempenho agronômico de genótipos de pimentão. Utilizou-se o delineamento experimental de blocos casualizados, com 17 tratamentos (17 genótipos e quatro repetições. A parcela experimental foi constituída por uma fileira com 30 plantas, no espaçamento de 1,00 x 0,45 m. Efetuou-se um total de dez colheitas sendo a primeira feita aos 28 de julho de 1996 (77 dias após o transplante e a última em 9 de novembro de 1996. Vários híbridos F1 apresentaram boas características agronômicas, podendo ser plantadas na região, no período de inverno, principalmente Lygia, Magali e Magali R, Acuário, Luis, Fresco (BS 50-30 e Sambor. O híbrido Lygia F1 destacou-se em produtividade, seguido por Acuário F1 e Magali F1, e também em número total de frutos, porém apresentou formato de fruto próximo ao quadrado e classificação inferior de frutos extra AA. Os genótipos Acuário F1, Sambor F1, Fresco (BS 50-30 F1, Luis F1 e All Big se destacaram em frutos tipo extra AA, enquanto Magna Super, Nacional AG-506, Itaipu e Hércules AG-672, apresentaram maior número de frutos tipo extra A.An experimental field was carried out in the Jordão farm, located in Araguari, MG, Brazil, at 18º38'30" S and 48º11'18" W, during the winter season, with the purpose of evaluating the agronomic potential of sweet pepper cultivars. The experimental design was in randomized blocks with 17 treatments (17 genotypes with four replications. The experimental plots were made up each of one line with 30 plants, with 1 m of space between lines and 0,45 m between plants. A total of ten harvestings were made starting on July 28, 1996 (77 days after transplanting and ending on November 9, 1996. Several F1 hybrids as Lygia F1, Magali F1, Magali R F1, Acuário F1, Luis F1, Fresco (BS 50-30 F1 and Sambor F1 showed good

  6. Distribution, abundance and morphometry of Atlantoraja cyclophora (Regan, 1903 (Elasmobranchii: Rajidae in southern Brazil, Southwestern Atlantic

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    María Cristina Oddone

    2004-09-01

    Full Text Available A total of 459 individuals of Atlantoraja cyclophora were captured along the Rio Grande do Sul coast between latitudes 30º40'S and 34º30'S. Two surveys were performed, in the winter 2001 and in the summer/autumn 2002, using bottom-trawl between the depths of 100 and 600 m. This species occurred between 100 and 300 m deep, without significant differences in the frequency of occurrence and abundance (CPUE; kg/hour between latitudes, depth and seasons. The sex ratio was not significantly different from 1:1 in all depths. In the study area, temperature ranged between 10.0 ºC and 17.6 ºC and salinity between 35.2 e 36.0 ppm. There was no correlation between CPUE and depth, temperature and salinity. Mean total length of females (53.2 cm was significantly larger than males (50.9 cm. No differences were detected in mean total length between seasons, but mean total length was significantly larger in depths of 100 m and 200 m. The distribution of the frequencies of total length was asymmetric, indicating rareness or lack of juveniles in the samples.Foram capturados 459 exemplares de Atlantoraja cyclophora na costa do Rio Grande do Sul entre as latitudes 30º40'S e 34º30'S, em dois cruzeiros realizados respectivamente no inverno de 2001 e no verão/outono de 2002, com rede de arrasto de fundo, operada entre 100 e 600 m de profundidade. A espécie ocorreu nas profundidades de 100 a 300 m, não havendo diferenças significativas na freqüência de ocorrência nem na abundância (CPUE; kg/hora entre latitudes, estratos de profundidade em ambas estações do ano. A proporção sexual não foi significativamente diferente de 1:1 em todas as profundidades. Na área estudada a temperatura variou entre 10,0 ºC e 17,6 ºC e a salinidade entre 35,2 e 36,0 ppm. Não houve correlação entre CPUE e profundidade, temperatura e salinidade. O comprimento total médio das fêmeas (53,2 cm foi significantemente maior que o dos machos (50,9 cm. Não houve diferen

  7. Distribution of hepatitis B infection in Brazil: the epidemiological situation at the beginning of the 21 st century

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    Francisco José Dutra Souto

    2015-01-01

    Full Text Available Abstract Brazil was formerly considered a country with intermediate hepatitis B endemicity, with large heterogeneity between Brazilian regions and areas of high prevalence, especially in the Amazon basin. Systematic vaccination of children was initiated in 1998. Between 2004 and 2009, a large population-based study reported decreased prevalence in all regions of Brazil. This review analyzed the current hepatitis B epidemiological situation in Brazil through a systematic search of the scientific literature in MEDLINE, LILACS, and CAPES thesis database, as well as disease notifications to the Information System for Notifiable Diseases. The search strategy identified 87 articles and 13 theses, resulting in 100 total publications. The most recent results indicate reduced hepatitis B prevalence nationwide, classifying Brazil as having low endemicity. Most studies showed HBV carrier prevalence less than 1%. However, there are still isolated regions with increased prevalence, particularly the Amazon, as well as specific groups, such as homeless people in large cities and isolated Afro-descendant communities in the center of the country. This review alsao detected successful vaccination coverage reported in a few studies around the country. The prevalence of anti-HBs alone ranged from 50% to 90%. However, isolated and distant localities still have low coverage rates. This review reinforces the downward trend of hepatitis B prevalence in Brazil and the need to intensify vaccination strategies for young people and adults in specific regions with persisting higher HBV infection prevalence.

  8. Distribution of hepatitis B infection in Brazil: the epidemiological situation at the beginning of the 21 st century.

    Science.gov (United States)

    Souto, Francisco José Dutra

    2016-02-01

    Brazil was formerly considered a country with intermediate hepatitis B endemicity, with large heterogeneity between Brazilian regions and areas of high prevalence, especially in the Amazon basin. Systematic vaccination of children was initiated in 1998. Between 2004 and 2009, a large population-based study reported decreased prevalence in all regions of Brazil. This review analyzed the current hepatitis B epidemiological situation in Brazil through a systematic search of the scientific literature in MEDLINE, LILACS, and CAPES thesis database, as well as disease notifications to the Information System for Notifiable Diseases. The search strategy identified 87 articles and 13 theses, resulting in 100 total publications. The most recent results indicate reduced hepatitis B prevalence nationwide, classifying Brazil as having low endemicity. Most studies showed HBV carrier prevalence less than 1%. However, there are still isolated regions with increased prevalence, particularly the Amazon, as well as specific groups, such as homeless people in large cities and isolated Afro-descendant communities in the center of the country. This review alsao detected successful vaccination coverage reported in a few studies around the country. The prevalence of anti-HBs alone ranged from 50% to 90%. However, isolated and distant localities still have low coverage rates. This review reinforces the downward trend of hepatitis B prevalence in Brazil and the need to intensify vaccination strategies for young people and adults in specific regions with persisting higher HBV infection prevalence. PMID:26689276

  9. Hepatitis C virus genotypes in Pakistan: a systemic review

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    Ali Ijaz

    2011-09-01

    Full Text Available Abstract Background and aim Phylogenetic analysis has led to the classification of hepatitis C virus (HCV into 1-6 major genotypes. HCV genotypes have different biological properties, clinical outcome and response to antiviral treatment and provide important clues for studying the epidemiology, transmission and pathogenesis. This article deepens the current molecular information about the geographical distribution of HCV genotypes and subgenotypes in population of four provinces of Pakistan. 34 published papers (1996-2011 related to prevalence of HCV genotypes/serotypes and subgenotypes in Pakistan were searched. Result HCV genotype/s distribution from all 34 studies was observed in 28,400 HCV infected individuals in the following pattern: 1,999 (7.03% cases of genotype 1; 1,085 (3.81% cases of genotype 2; 22,429 (78.96% cases of genotype 3; 453 (1.59% cases of genotype 4; 29 (0.10% cases of genotype 5; 37 (0.13% cases of genotype 6; 1,429 (5.03% cases of mixed genotypes, and 939 (3.30% cases of untypeable genotypes. Overall, genotype 3a was the predominant genotype with a rate of 55.10%, followed by genotype 1a, 3b and mixed genotype with a rate of 10.25%, 8.20%, and 5.08%, respectively; and genotypes 4, 5 and 6 were rare. Genotype 3 occurred predominately in all the provinces of Pakistan. Second more frequently genotype was genotype 1 in Punjab province and untypeable genotypes in Sindh, Khyber Pakhtunkhwa and Balochistan provinces.

  10. Molecular epidemiology of American/Asian genotype DENV-2 in Peru.

    Science.gov (United States)

    Cruz, Cristhopher D; Forshey, Brett M; Juarez, Diana S; Guevara, Carolina; Leguia, Mariana; Kochel, Tadeusz J; Halsey, Eric S

    2013-08-01

    During the past decade, countries in South America have reported dengue hemorrhagic fever (DHF) associated with American/Asian genotype of dengue virus serotype 2 (DENV-2). DENV-2 strains have been associated with large outbreaks of dengue fever and DHF in numerous regions of Peru since the mid-1990s, but studies to address the origins, distribution, and genetic diversity of DENV-2 strains have been limited. To address this knowledge gap, we sequenced the envelope gene region of DENV-2 isolates from Peru, Ecuador, Paraguay, and Bolivia. Sequences were aligned and compared to a global sample of DENV-2 viruses. Phylogenetic analysis confirmed the circulation of two DENV-2 genotypes in Peru: American (prior to 2001) and American/Asian (2000 to present). American/Asian genotype variants can be classified into two lineages, and these were introduced into Peru from the north (Ecuador, Colombia, and/or Venezuela) and the east (Brazil and Bolivia). American/Asian lineage II replaced lineage I after 2009. We estimate the time to the most recent common ancestor for American/Asian DENV-2 genotype in the Americas was in 1980, and 1984 and 1989 for lineages I and II, respectively. In light of evidence for increased virulence of lineage II of American/Asian DENV-2, our results support the need for continuous monitoring for the emergence of new DENV genotypes that may be associated with severe disease. PMID:23648427

  11. Distribuição radicular, estado nutricional e produção de colmos e de açúcar em soqueiras de dois cultivares de cana-de-açúcar em solos distintos Root distribution, plant nutritional status, and stalk and sugar yield in two genotypes of sugarcane in distinct soils

    Directory of Open Access Journals (Sweden)

    Mirian Cristina Gomes Costa

    2007-12-01

    Full Text Available O presente trabalho de pesquisa foi elaborado com o objetivo de comprovar a hipótese de que o cultivar de cana-de-açúcar RB83-5486, comparado ao RB83-5089, apresenta melhor distribuição radicular mediante cultivo em solo com menor teor de argila. O estudo foi realizado a partir de dois experimentos de campo desenvolvidos no município de Porto Feliz, SP. Os solos foram classificados como Nitossolo Vermelho eutroférrico latossólico (NV e Latossolo Vermelho-Amarelo distrófico psamítico (LVA. No período entre a terceira e a quinta soca (2002 a 2004, os cultivares de cana-de-açúcar RB83-5486 e RB83-5089 foram avaliados a partir de estudos de atributos químicos e físicos do solo, do estado nutricional da cultura, da distribuição de raízes no perfil do solo e da produtividade e qualidade tecnológica da cana-de-açúcar. A distribuição de raízes foi avaliada utilizando-se o método da trincheira ou parede do perfil. Os resultados indicaram diferença na concentração de hidrogênio dos solos relacionada com a atividade dos cultivares na absorção de nutrientes. O teor foliar de potássio e enxofre foi maior para o cultivar RB83-5486. No LVA, ambos os cultivares apresentaram maior quantidade de raízes concentrando-se até os 18 cm de distância a partir das linhas de cana e até os 54 cm de profundidade. No NV, o cultivar RB83-5486 apresentou maior quantidade de raízes concentrando-se até 23 cm de distância a partir das linhas de cana e até os 46 cm de profundidade. Já o cultivar RB83-5089 mostrou distribuição do sistema radicular mais uniforme no NV. A produção de colmos foi maior no cultivar RB83-5089; contudo, a produção de açúcar foi maior em RB83-5486.Two field experiments were carried out in Porto Feliz, SP, Brazil, to test the hypothesis that in soils with low clay content, sugarcane genotype RB83 5486 has a better root system distribution than genotype RB83-5089. The two soils used were classified as Typic

  12. Three new species and new distributional records of Oecetis McLachlan 1877 (Trichoptera: Leptoceridae: Leptocerinae) from Brazil.

    Science.gov (United States)

    Henriques-Oliveira, Ana Lucia; Dumas, Leandro Lourenço; Nessimian, Jorge Luiz

    2014-01-01

    The genus Oecetis is widespread over the world, being most diverse in tropical areas, especially in the Australian Region. Of about 400 described species, only 34 occur in the Neotropical Region. Herein, we describe and illustrate three new species of Oecetis from Brazil: Oecetis angelae sp. nov., O. danielae sp. nov. and O. iara sp. nov. Furthermore, O. doesburgi, O. dominguezi, and O. knutsoni are recorded for the first time in Brazil. Also, we provide new state records for 7 species: O. amazonica, O. connata, O. excisa, O. fibra, O. iguazu, O. inconspicua, and O. paranensis. PMID:24872297

  13. Fauna of Simuliidae (Diptera from the state of Espírito Santo, Brazil: distribution, new records and list of species

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    Karina Bertazo

    2013-03-01

    Full Text Available Fauna of Simuliidae (Diptera from the state of Espírito Santo, Brazil: Distribution, new records and list of species. The fauna of Simuliidae in Brazil is composed of 87 species, 17 of which are recorded from the state of Espírito Santo. Entomological collections were carried out in 2010-2011 with the objective of increasing the knowledge of the species richness of this family in the state. Ninety three rivers and streams were sampled, each collection being carried out in a 50m transect. During the study period 30 species were collected, 13 of which represent new records for the state, 12 of the genus Simulium and one of the genus Lutzsimulium. Among these new state records one, Simulium lobatoi, also represents a new record from southeastern Brazil. The other newly recorded species are: Lutzsimulium hirticosta, Simulium distinctum, Simulium exiguum, Simulium oyapockense, Simulium botulibranchium, Simulium petropoliense, Simulium clavibranchium, Simulium rappae, Simulium minusculum, Simulium dinellii, Simulium ochraceum and Simulium scutistriatum.

  14. Hepatitis C Virus Genotypes

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    Kayhan Azadmanesh

    2005-09-01

    , based on its phenotype according to its disease pattern or cytopathology, and serotype based on a panel of cross-neutralization antibodies, impossible(21. Phylogenetic analysis may aid in the separation of sequences into distinct types(22. So far six majorgenotypes (HCV-1 to HCV-6 have been described, each containing multiple subtypes (e.g., 1a, 1b, etc.. More than 50 subtypes have been reported todate and are normally identified on the bases of partial gene sequences from E1 and NS5B. The isolates formerly published as genotypes 7 to 11 are now considered subtypes within genotypes 3 (subtype 10 and 6 (subtypes 7, 8, 9, and 11(22.In general, sequence characteristics of a particular subtype are found throughout the HCV genome. Thus, the HCV genotype has been determined primarily based on analysis of partial genome sequences. The most extensive database exists for the 5'-UTR, core, E1, and NS5B (23-28. Whereas the 5'-UTR is highly conserved and therefore preferred for diagnosis, the core, the envelope, and the NS5B regions are less conserved and therefore highly discriminative and preferred for subtyping. Although the 5'-UTR contains characteristic sequence motifs of some genotypes, analysis of this region may not accurately predict all genotypes or subtypes. HCV Genotyping MethodsMolecular Genotyping Because differences in geographical distribution, disease outcome, and response to therapy among HCV genotypes have been suggested, reliable 1 573 1149 2187 3078 4971 5916 9033C E1 E2 P7 NS2 NS3 NS4A NS4B NS5A NS5B Figure 1. The HCV genome contains a single open reading frame (ORF. The genes for structural proteins (C, E1, E2, P7 are situated towards the N-terminus of the ORF. Genes coding for proteins necessary for viral replication are found towards the C-terminus of the ORF. methods for determining the HCV genotype may become an important clinical test. The HCV genotype can be determined by nucleotide sequencing of a specific PCR-amplified portion of the HCV genome

  15. Clinical value of human papillomavirus genotype distribution in HPV infection%人乳头瘤病毒亚型在其感染相关疾病中检测的意义

    Institute of Scientific and Technical Information of China (English)

    贾英; 周敏; 吴瑾; 唐良萏

    2009-01-01

    目的 通过分析人乳头瘤病毒(human papiilomavirus,HPV)不同亚型的分布特点,探讨不同的基因型与HPV感染相关疾病的关系.方法 回顾性分析在门诊确诊为宫颈上皮内瘤样病变(cervical intraepithelial neoplasia.CIN)Ⅰ、CIN Ⅱ、CINⅢ、宫颈浸润癌、生殖道湿疣、宫颈HPV亚临床感染共353例患者的HPV哑型的分布情况.结果 353例妇女中HPV阳性176例,阳性率为49.86%.浸润癌中HPV的检出率为100%,且均为高危性HPV感染;HPV感染率在CIN Ⅰ、CIN Ⅱ、CINⅢ、浸润癌逐渐增高,与病变程度密切相关(P<0.05).共检测出15种HPV亚型,依次为16、58、52、33、53、11、31、6、18型等,前4种亚型在宫颈癌和癌前病变中最常见,16、58型等高危型HPV感染在HPV感染相关的良性疾病中仍然最常见,低危型HPV在生殖道湿疣、亚临床感染中却相对少见.结论 HPV检测和分型具有重要意义,HPV感染的型别具有地域差异性;HPV16型的感染仍是女性健康的最大威胁;应重视生殖道湿疣和SPI等良性病变患者的治疗和随访.%Objective To analyze the distribution of human papillomavirus ( HPV) genotype in the disea-ses associated with HPV infection and explore the role of HPV genotype in these diseases. Methods Retro-spective analysis was carried out to compare HPV genotypes of 353 outpatients suffering the diseases associated with HPV infection including cervical caner, cervical intraepithelial neoplasia (CIN) , genital due condyloma, and subclinical cervical human papillomavirus infection (SP1) in our department from January to October 2008. HybriMax were used to detect HPV genotype. The distribution data of HPV genotype were statistically analyzed. Results Totally 176 HPV positive females were found with a positive rate of 49. 86%. HPV positive rate in cervical cancer was 100% , and all of them were high risk HPV. The positive rate was increased with the severi-ty of CIN, and the higher histological

  16. The gender-specific apolipoprotein E genotype influence on the distribution of plasma lipids and apolipoproteins in the population of Rochester, Minnesota. II. Regression relationships with concomitants

    Energy Technology Data Exchange (ETDEWEB)

    Reilly, S.L.; Sing, C.F. (Univ. of Michigan, Ann Arbor (United States)); Ferrell, R.E. (Univ. of Pittsburgh, PA (United States)); Kottke, B.A. (Mayo Clinic, Rochester, MN (United States))

    1992-12-01

    The influence of the apolipoprotein E (Apo E) polymorphism and gender on the regression relationships between each of nine plasma lipid and apolipoprotein traits (total cholesterol; ln triglycerides; high-density-lipoprotein chloesterol; apolipoproteins AI, AII, B, and CII; ln CIII; and ln E) and four concomitants (age, weight, waist-to-hip ratio, and smoking) was studied in 507 unrelated individuals representative of the adult population of Rochester, MN. Analyses are presented separately for females and males. Each lipid and apolipoprotein trait exhibited at least one Apo E genotype-specific regression relationship with the concomitants investigated in this study. In most cases the heterogeneity of regression was associated with differences between the [var epsilon]32 and [var epsilon]33 genotype. This study documents that the influence of Apo E genotype on average levels of plasma lipids and apolipoproteins varies among subdivisions of the population defined by age, body size, and smoking status. 61 refs., 1 fig., 5 tabs.

  17. Distributed photovoltaic generation in Brazil: An economic viability analysis of small-scale photovoltaic systems in the residential and commercial sectors

    International Nuclear Information System (INIS)

    This paper examines the economic viability of small-scale, grid-connected photovoltaics in the Brazilian residential and commercial sectors after the introduction of the net metering regulation in April 2012. This study uses the discounted cash flow method to calculate the specific investment costs that are necessary for photovoltaic systems to be economically viable for each of the 63 distribution networks in Brazil. We compare these values to the system costs that are estimated in the comprehensive study on photovoltaics that was developed by the Brazilian Association of Electric and Electronic Industries (ABINEE). In our calculation, we utilize the current electricity tariffs, including fees and taxes, which we obtained through telephone interviews and publicly available information. We obtained a second important parameter by simulating PV-systems with the program PV⁎Sol at the distribution company headquarters' locations. In our base case scenario that reflects the current situation, in none of the distribution networks photovoltaics is economically viable in either the commercial or residential sectors. We improved the environment for grid-connected photovoltaics in our scenarios by assuming both lower PV-system costs and a lower discount rate to determine the effect on photovoltaics viability. - Highlights: • We calculate the economic viability of photovoltaics in the residential and commercial sectors in Brazil. • The PV⁎Sol simulations are carried out at the headquarter locations for the 63 distribution companies. • Currently in none of the distribution networks, photovoltaics is economically viable in either the commercial or residential sectors. • We analyze how the variation of the specific investment costs and of the discount rate affects the economic viability

  18. Aging, Alzheimer’s, and APOE genotype influence the expression and neuronal distribution patterns of microtubule motor protein dynactin-P50

    Directory of Open Access Journals (Sweden)

    Orwa eAboud

    2015-03-01

    Full Text Available Reports from neural cell cultures and experimental animal studies provide evidence of age- and disease-related changes in retrograde transport of spent or misfolded proteins destined for degradation or recycling. However, few studies address these issues in human brain from those who either age without dementia and overt neuropathology, or succumb to Alzheimer’s; especially as such propensity may be influenced by APOE genotype. We studied the expression and distribution of the dynein subunit dynactin-P50, the β amyloid precursor protein (βAPP, and hyperphosphorylated tau (P-tau in tissues and tissue sections of brains from non-demented, neuropathology-free patients and from Alzheimer patients, with either APOE ε3,3 or APOE ε4,4. We found that advanced age in patients without dementia or neuropathological change was associated with coordinated increases in dynactin-P50 and βAPP in neurons in pyramidal layers of the hippocampus. In contrast, in Alzheimer’s, βAPP and dynactin were significantly reduced. Furthermore, the dynactin-P50 and βAPP that was present was located primarily in dystrophic neurites in Aβ plaques. Tissues from Alzheimer patients with APOE ε3,3 had less P-tau, more βAPP, dynactin-P50, and synaptophysin than did tissues from Alzheimer patients carrying APOE ε4,4. It is logical to conclude, then, that as neurons age successfully, there is coordination between retrograde delivery and maintenance and repair, as well as between retrograde delivery and degradation and/or recycling of spent proteins. The buildup of proteins slated for repair, synaptic viability, transport, and re-cycling in neuron soma and dystrophic neurites suggest a loss of this coordination in Alzheimer neurons. Inheritance of APOE ε3,3 rather than APOE ε4,4, is associated with neuronal resilience, suggestive of better repair capabilities, more synapses, more efficient transport, and less hyperphosphorylation of tau. We conclude that even in disease

  19. Richness, geographic distribution and ecological aspects of the fern community within the Murici Ecological Station in the state of Alagoas, Brazil

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    Anna Flora de Novaes Pereira

    2013-12-01

    Full Text Available We conducted a floristic survey of ferns within the Murici Ecological Station (remnant of the northeastern Atlantic Forest, located near the municipalities of Messias and Murici, in the state of Alagoas, Brazil. To increase knowledge of the ferns of Alagoas, we evaluated the species occurring in the study area in terms of richness, composition, geographic distribution, similarities with species in other Brazilian biomes, regional conservation status and ecological aspects. Data were obtained from field work conducted between March 2009 and September 2010. We identified 107 species of ferns, of which 19 represent new records for Alagoas. The richest families were Pteridaceae (29 species and Polypodiaceae (22 species. The richest genera were Adiantum (15 species and Thelypteris (9 species. Most of the species sampled are widely distributed throughout Brazil and the Americas. Within the context of the northeastern Atlantic Forest, 12 species were considered endangered. Concerning the ecological aspects, 88.8% of the species identified were herbaceous, 57.9% were terrestrial and 70.0% occurred in the forest interior.

  20. Spatial and temporal distribution of fish eggs and larvae in a subtropical coastal lagoon, Santa Catarina State, Brazil

    Directory of Open Access Journals (Sweden)

    Luis C. P. Macedo-Soares

    2009-06-01

    Full Text Available This study investigated the variation in abundance, distribution and composition of ichthyoplankton in a lagoon in southern Brazil through the year and at different stations within the lagoon. Ibiraquera Lagoon is a shallow coastal lagoon connected to the sea by a semi-permanent sandbar. Ichthyoplankton samples were collected monthly from December 2003 to December 2004, with a 200 µm mesh net using horizontal surface hauls. A colder, drier period was detected, contrasting with warm months during which salinity varied depending on rainfall and whether the sandbar was open or closed. The mean abundance of ichthyoplankton over the study period was 459.6 ± 76.2 (SE eggs · 100 m-3 and 63.6 ± 7.9 (SE larvae · 100 m-3, and they were present during all months. Significantly higher abundances of eggs and larvae were observed during warm months. The community was dominated by the family Engraulidae followed by Clupeidae, Gobiidae and Mugilidae. Engraulidae and Clupeidae were present throughout the year, with greater abundances in months with higher temperatures. Some coastal fish species spawn in Ibiraquera Lagoon, mainly near to the sandbar, demonstrating that the lagoon is a spawning area for coastal stock. We recommend the establishment of environmental procedures to promote the conservation of Ibiraquera Lagoon and its ichthyoplankton community.A abundância, distribuição e composição do ictioplâncton foram investigadas em uma lagoa no sul do Brasil durante um ano e em diferentes estações dentro da lagoa. A lagoa de Ibiraquera é uma lagoa costeira rasa, conectada ao mar através de uma barra semi-permanente. As amostras de ictioplâncton foram coletadas mensalmente entre dezembro de 2003 e dezembro de 2004, com uma rede cônico-cilíndrica de 200 µm de malha em arrastos horizontais e de superfície. Foi detectado um período frio e seco em contraste aos meses quentes e com variação na salinidade em função das chuvas e da barra estar

  1. Distribution, abundance and biomass of Chaetognaths off São Sebastião region, Brazil in February 1994

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    Tsui-Hua Liang

    2002-01-01

    Full Text Available The distribution, abundance, biomass, population structure and feeding habits of chaetognaths collected off São Sebastião region, Brazil, in February 1994 are described. Bongo nets were hauled obliquely to collect zooplankton samples. Forty-three samples obtained with the 333 urn mesh were analysed. In this study, 7 chaetognath species belonging to two genera were identified. Sagitta friderici, S. tenuis and S. bipunctata were grouped into the neritic category, and Sagitta enflata, S. hispida, S. minima and Krohnita pacifica into the semi-neritic group. The analysis of the community structure distinguished 3 zones: 1 a nearshore zone evidenced by low richness; 2 an offshore zone evidenced by higher number of species and 3 another offshore zone, located south and south-westward of São Sebastião Island, characterised by higher richness but with dominance of one species. The nearshore zone was dominated by the neritic species S. friderici and S. tenuis, whereas the offshore zone was dominated by S. enflata. Abundance and biomass increase from nearshore toward offshore zones by about two orders of magnitude. Gut content analysis revealed over 90% of empty guts. The chaetognath population was composed mainly of juveniles. The diets among the different chaetognath species was very similar, composed mostly of small copepods and appendicularians.No presente trabalho foram estudados a distribuição, abundância, biomassa, estrutura da população e hábito alimentar dos quetógnatos coletados na região de São Sebastião, Brasil, em fevereiro de 1994. As 43 amostras de zooplâncton utilizadas na elaboração deste trabalho foram obtidas através de arrastos oblíquos usando uma rede Bongô (333 um, providas de fluxômetro. Foram identificadas sete espécies de Chaetognatha pertencentes a dois gêneros. Sagitta friderici, S. tenuis e S. bipunctata foram agrupadas como espécies neríticas, enquanto que Sagitta enflata, S. hispida, S. minima e

  2. The spatial distribution of the subtidal benthic macrofauna and its relationship with environmental factors using geostatistical tools: a case study in Trapandé Bay, southern Brazil

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    Fernanda M. de Souza

    2013-02-01

    Full Text Available Modeling the distribution patterns of the estuarine macrobenthic community has revealed itself as a difficult task due to spatio-temporal heterogeneity. This study uses ordinary kriging and Poisson modeling to generate distribution maps of the subtidal benthic macrofauna in the Trapandé Bay (southeastern Brazil. Samples were taken in duplicate from 36 locations distributed along nine transects perpendicular to the main estuarine axis in October 2006 and March 2007. One-hundred and seventy taxa belonging to 12 phyla, were identified, with dominance of Annelida Polychaeta. Distribution maps were prepared to illustrate the total density, the number of species and the six most numerous taxa, as well as abiotic parameters. The general distribution pattern has revealed that the greatest number of species and the highest densities are at the estuary mouth, decreasing towards its inner areas. However the temporal and spatial changes observed at the estuary mouth have clearly shown the impact of environmental variations such as nutrients and freshwater input, attributed to increased rainfall in March. The increased flow in the Cananeia Sea, coming from the drainage basin, produces major changes in sediment and faunal composition. Ordinary kriging associated with Poisson modeling has proved to be a powerful and promising tool for modeling the macrofauna, despite the fact that it is not frequently used due to the scarcity of appropriate software.

  3. Distribution, feeding behavior and control strategies of the exotic land snail Achatina fulica (Gastropoda: Pulmonata) in the northeast of Brazil Ecologia do caracol exótico Achatina fulica (Gastropoda:Pulmonata) no nordeste do Brasil

    OpenAIRE

    FS. Albuquerque; MC. Peso-Aguiar; MJT. Assunção-Albuquerque

    2008-01-01

    The goal of this study was to document the distribution and establishment A. fulica such as their feeding preference and behavior in situ. The study was carried out at the city of Lauro de Freitas, Bahia state, Brazil, between November 2001 and November 2002. We used catch per unit effort methods to determine abundance, distribution, habitat choice and food preferences. The abundance and distribution of A. fulica was most representative in urban area, mainly near to the coastline. Lots and ho...

  4. Amphibian-killing chytrid in Brazil comprises both locally endemic and globally expanding populations.

    Science.gov (United States)

    Jenkinson, T S; Betancourt Román, C M; Lambertini, C; Valencia-Aguilar, A; Rodriguez, D; Nunes-de-Almeida, C H L; Ruggeri, J; Belasen, A M; da Silva Leite, D; Zamudio, K R; Longcore, J E; Toledo, F L; James, T Y

    2016-07-01

    Chytridiomycosis, caused by the fungus Batrachochytrium dendrobatidis (Bd), is the emerging infectious disease implicated in recent population declines and extinctions of amphibian species worldwide. Bd strains from regions of disease-associated amphibian decline to date have all belonged to a single, hypervirulent clonal genotype (Bd-GPL). However, earlier studies in the Atlantic Forest of southeastern Brazil detected a novel, putatively enzootic lineage (Bd-Brazil), and indicated hybridization between Bd-GPL and Bd-Brazil. Here, we characterize the spatial distribution and population history of these sympatric lineages in the Brazilian Atlantic Forest. To investigate the genetic structure of Bd in this region, we collected and genotyped Bd strains along a 2400-km transect of the Atlantic Forest. Bd-Brazil genotypes were restricted to a narrow geographic range in the southern Atlantic Forest, while Bd-GPL strains were widespread and largely geographically unstructured. Bd population genetics in this region support the hypothesis that the recently discovered Brazilian lineage is enzootic in the Atlantic Forest of Brazil and that Bd-GPL is a more recently expanded invasive. We collected additional hybrid isolates that demonstrate the recurrence of hybridization between panzootic and enzootic lineages, thereby confirming the existence of a hybrid zone in the Serra da Graciosa mountain range of Paraná State. Our field observations suggest that Bd-GPL may be more infective towards native Brazilian amphibians, and potentially more effective at dispersing across a fragmented landscape. We also provide further evidence of pathogen translocations mediated by the Brazilian ranaculture industry with implications for regulations and policies on global amphibian trade. PMID:26939017

  5. Selection of Cactus Pear Forage (Opuntia spp. and (Nopalea spp. Genotypes resistant to the Carmine Cochineal (Dactylopius opuntiae cockerell, 1929 in the State of Paraíba, Brazil

    Directory of Open Access Journals (Sweden)

    Edson Batista Lopes

    2010-04-01

    Full Text Available Since 2001, the giant cactus pear (O. ficus-indica has been decimated by carmine cochineal (Dactylopius opuntiae Cockerell, 1929, considered a potentially devastating pest. The objective of this research was to select genotypes resistant of cactus pear to the carmine cochineal. The experiment was conducted at the Laboratory of Plant Protection of Lagoa Seca Experimental Station owned by the Agricultural Research Corporation of Paraiba-EMEPA-PB, during the months of February to July 2009. We evaluated 22 genotypes of cactus pear (Opuntia spp. and Nopalea spp.. Of each genotype were selected five cladodes, standardized in relation to the physiological state (age of the cladodes. They were divided into four quadrants, where one in every five of them were applied “toothpicks” infested with the insect colonies, a total of 20 colonies/cladodes. Weekly cladodes of the infested genotypes were inspected to evaluate the growth of old colonies and the emergence of new colonies. This procedure took 60 days. The results showed that the genotypes Palma ornamental (Opuntia stricta,, X-Italiana, Palma Gigante, F5, F8, F11, V12, IPA-Clone 20, Orelha-de-onça (Opuntia sp., Redonda, Branco São Pedro, Formosa, Lingua-de-vaca and Gigantona are susceptible to the carmine cochineal. Already the genotypes Baiana or Alagoana, Palma Doce or Miúda Orelha-de-elefante-africana, Orelha-de-elefante-mexicana, Orelha-de-onça (Nopalea sp. and Palma Azul are resistant to the carmine cochineal.

  6. Histochemical studies on genetical control of hormonal enzyme inducibility in the mouse. III. Beta-glucuronidase distribution pattern of epididymis in different genotypes

    DEFF Research Database (Denmark)

    Blecher, S R; Kirkeby, S

    1979-01-01

    correlated with previous data for alpha-naphthyl acetate esterase. Differences between sites of granular and diffuse reaction product for these two enzymes are recorded. Possible interpretations of these findings in terms of intracellular localization of enzymes are discussed. Studies on different strains...... reveal regular differences in histochemical organization between mice of various genotypes. Histochemical data which imply androgen inducibility of beta-glucuronidase in mouse epididymis are preliminary noted....

  7. Distribution of sand flies (Diptera: Psychodidae at different altitudes in an endemic region of American cutaneous leishmaniasis in the State of Espírito Santo, Brazil

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    Adelson Luiz Ferreira

    2001-11-01

    Full Text Available The involvement of different sand fly species in the transmission of American cutaneous leishmaniasis (ACL at different altitudes was evaluated in the municipality of Afonso Cláudio in the State of Espírito Santo, Brazil, from November 1995 to February 1997. CDC light traps and Shannon traps baited with human volunteers were hung simultaneously at three altitudes of a river valley: (a 650-750 m in an area of active ACL transmission; (b 750-850 m in a transitional area; and (c 850-950 m in an area where no ACL transmission occurred. A total of 13,363 specimens belonging to 28 species was collected. The five most abundant man-biting species were Lutzomyia intermedia, which constituted 24.3% of the total, Lu. migonei (22.3%, Lu. whitmani (15.4%, Lu. fischeri (14.9% and Lu. monticola (5.8%. Analysis of the distribution of these species at the three altitudes provided evidence that Lu. fischeri and Lu. monticola were not involved in ACL transmission, whereas Lu. migonei and Lu. whitmani might act as secondary vectors of Leishmania (Viannia braziliensis and Lu. intermedia was probably the principal vector of the parasite. These results reinforce those published in the existing literature, which indicate that Lu. intermedia is the main vector of Le. (V. braziliensis in Southeast Brazil, while Lu. migonei and Lu. whitmani are of secondary importance.

  8. Spatial distribution and risk factors for Toxoplasma gondii seropositivity in cattle slaughtered for human consumption in Rondônia, North region, Brazil.

    Science.gov (United States)

    de Souza, Juliana Bianca Rocha; Soares, Vando Edésio; Maia, Maerle Oliveira; Pereira, Cleidiane Magalhães; Ferraudo, Antônio Sergio; Cruz, Breno Cayeiro; Pires Teixeira, Weslen Fabrício; Felippelli, Gustavo; Maciel, Willian Giquelin; Gonçalves, Walter Antonio; da Costa, Alvimar José; Zanetti Lopes, Welber Daniel

    2016-08-15

    The present study aimed to evaluate Toxoplasma gondii seroprevalence in cattle slaughtered for human consumption from rural properties in the state of Rondônia, North region, Brazil; the seroprevalence was determined using indirect immunofluorescence assays (IFATs). Additionally, spatial distribution and risk factors associated with toxoplasmosis were also analyzed. Of the 1000 cattle serum samples examined, 53 (5.3%) were determined to be seropositive for T. gondii with antibody titers (IgG) ≥64. In regard to results of the studied risk factors (presence of cats, cats with free access to cattle, breeding system, animal's gender, consumption of raw milk by humans on the property and cattle abortion in the last 12 months) and the odds ratio (OR) of each of these factors influencing cattle to acquire toxoplasmosis, only animals raised on a feeder/stocker/backgrounder system presented a higher probability of being seropositive for T. gondii (OR≥1, P=0.04) than cattle raised only in a feeder/stocker system. There was no association between the occurrence of reproductive problems and T. gondii seropositivity. Based on results obtained in the Brazilian state of Rondônia, it could be concluded that the presence of cats and their contact with cattle on each property, cattle breeding purpose and cattle abortion in the last 12 months were not considered risk factors for T. gondii infection in cattle. Considering that the presence of T. gondii was detected in animals slaughtered in the state of Rondônia, consuming raw or undercooked meat from seropositive cattle should be considered a route of transmission of T. gondii to humans. However, the prevalence of toxoplasmosis diagnosed in cattle from this state (5.30%) is lower than the prevalence of toxoplasmosis observed in South, Southeast and Center-West regions of Brazil, which may vary between 48.5% and 71.0%. The low prevalence of toxoplasmosis in cattle is highlighted in Rondônia, which is the sixth largest state

  9. Description of Microvelia urucara sp. nov. and new distributional data on veliids (Insecta: Heteroptera: Veliidae: from the Amazon River floodplain, Brazil

    Directory of Open Access Journals (Sweden)

    Felipe F. F Moreira

    2011-10-01

    Full Text Available Based on material collected on streams and lakes from the Amazon River floodplain, Brazil, Microvelia urucara sp. nov. is described, illustrated and compared with similar species. The new species, like many other Neotropical Microvelia Westwood, 1834, does not present striking modifications on the body or appendages, but can be separated from its congeners by features of the male genitalia. Distributional data is presented for other veliids collected along the Amazon River, and Paravelia capixaba Moreira, Nessimian & Rúdio, 2010 and Microvelia summersi Drake & Harris, 1928 are recorded for the first time from the Brazilian Amazon. Rhagovelia jubata Bacon, 1948 is newly recorded from the state of Amazonas, and Microvelia mimula White, 1879, M. pulchella Westwood, 1834 and M. venustatis Drake & Harris, 1933 are recorded for the first time from the state of Pará.

  10. The Model of Voronoi's Polygons and Density: Diagnosis of Spatial Distribution of Education Services of EJA in Divinópolis, Minas Gerais, Brazil.

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    Diogo De Castro Guadalupe

    2014-05-01

    Full Text Available This paper represents the application of a methodology that supports urban environmental studies to the identification and mapping of areas of influential points or spatial phenomenal occurrences, using the techniques of Multicriterial Analysis and of Voronoi Polygon. It focuses on the use of institutional alphanumeric database transformed into spatial analysis by the use of GIS and models of distribution, to support decision-making regarding allocation strategies and expansion of centers of experimental education called “EJA” (Youth and Adults Education in Divinópolis, a city in the state of Minas Gerais, Brazil. It describes the process of data that composes information which makes possible to perform urban analyzes and to simulate the scenarios considering the expansion of the system and the review of the allocation of some points.

  11. Vertical distribution of minor and trace elements by neutron activation instrumental analysis in estuary sediments of Santos e Sao Vicente, Sao Paulo State, Brazil

    International Nuclear Information System (INIS)

    Santos and Sao Vicente estuaries, located in Sao Paulo State, Southeast Brazil, comprises one of the most important industrial regions of the country. Such activities contribute for the enhancement of pollutants in the environment. The impact arising form the transport and accumulation of chemical substances, e.g. heavy metals, as well as the mechanisms of these processes are not fully understood. In this sense, much attention has been paid for the effluent discharges enriched by chemical elements in the near shore environment. The elements As, Ba, Br, Co, Cr, Cs, Hf, Rb, Sb, Se, Ta and Zr were analyzed in 27 sediment sample from Santos and Sao Vicente Estuary and from Santos Bay, aiming to determine the horizontal distribution of these elements. The obtained results was analyzed by means of Pearson correlation coefficient and cluster analyses. The utilization of a normalizer element is also discussed. (author)

  12. Seis novas larvas do gênero Micrathyria Kirby e notas sobre a distribuição no Brasil (Odonata, Libellulidae Six new larvae of genus Micrathyria Kirby and notes on distribution in Brazil. (Odonata, Libellulidae

    Directory of Open Access Journals (Sweden)

    Cristiane Vieira de Assis

    1994-01-01

    Full Text Available Six new Micrathyria Kirby, 1889 larvae from Brazil are described and compared to those described by SANTOS (1968, 1972, 1978 and NEEDHAM (1943. The distribution of the species is studied based on material deposited in colection of Museu Nacional, Universidade Federal do Rio de Janeiro (MN-UFRJ.

  13. Hepatitis C virus genotypes in Myanmar

    Science.gov (United States)

    Win, Nan Nwe; Kanda, Tatsuo; Nakamoto, Shingo; Yokosuka, Osamu; Shirasawa, Hiroshi

    2016-01-01

    Myanmar is adjacent to India, Bangladesh, Thailand, Laos and China. In Myanmar, the prevalence of hepatitis C virus (HCV) infection is 2%, and HCV infection accounts for 25% of hepatocellular carcinoma. In this study, we reviewed the prevalence of HCV genotypes in Myanmar. HCV genotypes 1, 3 and 6 were observed in volunteer blood donors in and around the Myanmar city of Yangon. Although there are several reports of HCV genotype 6 and its variants in Myanmar, the distribution of the HCV genotypes has not been well documented in areas other than Yangon. Previous studies showed that treatment with peginterferon and a weight-based dose of ribavirin for 24 or 48 wk could lead to an 80%-100% sustained virological response (SVR) rates in Myanmar. Current interferon-free treatments could lead to higher SVR rates (90%-95%) in patients infected with almost all HCV genotypes other than HCV genotype 3. In an era of heavy reliance on direct-acting antivirals against HCV, there is an increasing need to measure HCV genotypes, and this need will also increase specifically in Myanmar. Current available information of HCV genotypes were mostly from Yangon and other countries than Myanmar. The prevalence of HCV genotypes in Myanmar should be determined.

  14. Diesel oil safety stock in storage and distribution terminals: a case study: Porto Velho/Rio, Brazil

    Energy Technology Data Exchange (ETDEWEB)

    Freitas, Rubens C. [Agencia Nacional do Petroleo, Gas Natural e Biocombustiveis (ANP), Rio de Janeiro, RJ (Brazil); D' agosto, Marcio A. [Coordenacao dos Programas de Pos-Graduacao de Engenharia (COPPE/UFRJ), RJ (Brazil)

    2012-07-01

    This paper presents a methodology for calculating diesel oil safety stock in distributor terminals located in the northern of Brazil, applied on a case study for terminals in the state of Rondonia. From the mapping of logistic flows related to transport and storage of diesel oil, the risk factors that cause uncertainties in lead time were analyzed and quantified. Through a research conducted among economic agents (producers, distributors and carriers) operating in the region, it was measured the relevance and impact of risk factors on the safety stock in the terminals. The safety stock was calculated by the classical equation of inventories, as well as by the methodology proposed in this paper. The difference between the two methods has unveiled inefficiencies derived from uncertainties in lead time. Recommendations of actions to mitigate the risk factors are included at the end of this paper. (author)

  15. Spatial variations of environmental tracer distributions in water from a mangrove ecosystem: The case of Babitonga Bay (Santa Catarina, Brazil)

    International Nuclear Information System (INIS)

    The hydrologic complex of Babitonga Bay (Brazil) forms a vast environmental complex, where agriculture, shellfish farming, and industries coexist with a unique natural area of Atlantic rain forest. The origin of different continental hydrological components, the environmental transition between saline and fresh waters, and the influence of the seasonality on Babitonga Bay waters are evaluated using isotopes and chemistry. The end of the dry season is marked by a fast response of continental water to the first rainfall, while in the Bay this change is delayed in time. At the end of the rainy season waters show a more homogeneous isotopic composition, suggesting the harmonisation of hydrological and hydrogeological systems. Moreover, δ13C and δ15N of DIC and POM allows for the definition of the biogeochemical processes originating and transporting chemical compounds in the coastal and transition areas and for the determination of three distinct end-members: terrestrial, marine and urban. (author)

  16. Spatial variations of environmental tracers distribution in water from a mangrove ecosystem: the case of Babitonga Bay (Santa Catarina, Brazil)

    International Nuclear Information System (INIS)

    The hydrologic complex of Babitonga Bay (Brazil) forms a vast environmental complex, where agriculture, shellfish farming, and industries coexist with a unique natural area of Atlantic rain forest. The origin of different continental hydrological components, the environmental transition between saline and fresh waters, and the influence of the seasonality on Babitonga Bay waters are evaluated using isotopes and chemistry. The end of the dry season is marked by a fast response of continental water to the first rainfall, while in the Bay this change is delayed in time. At the end of the rainy season waters show a more homogeneous isotopic composition, suggesting the harmonisation of hydrological and hydrogeological systems. Moreover δ13C and δ15N of DIC, and POM allows for the definition of the biogeochemical processes originating and transporting chemical compounds in the coastal and transition areas and for the determination of three distinct end-members: terrestrial, marine and urban. (author)

  17. Distribution of human immunodeficiency virus type 1 subtypes in the State of Amazonas, Brazil, and subtype C identification

    International Nuclear Information System (INIS)

    Few studies have reported the molecular epidemiological characterization of HIV-1 in the Northern region of Brazil. The present study reports the molecular and epidemiological characterization of 31 HIV-1 isolates from blood donors from the State of Amazonas who donated blood between April 2006 and March 2007. Serum/plasma samples from all donors were screened for HIV antibodies by ELISA and the results confirmed by Western blot analysis. Genomic DNA was extracted from the buffy coat using the Super Quik-Gene-DNA Isolation kit. Nested PCR was performed on the env, gag, and pol regions of HIV-1 using the Gene Amp PCR System 9700. Sequencing reactions were performed using the inner PCR primers and the DYEnamic™ ET Dye Terminator Kit, and phylogenetic analysis was performed using the gag, pol, and env gene sequences. We collected samples from 31 blood donors who tested positive for HIV-1 in confirmatory experiments. The male:female ratio of blood donors was 3.4:1, and the mean age was 32.4 years (range: 19 to 61 years). Phylogenetic analysis showed that subtype B is the most prevalent among Northern Brazilian HIV-1-seropositive blood donors. One HIV-1 subtype C and one circulating recombinant form (CRF-BF) of HIV-1 were identified in the State of Amazonas. This is the first study showing the occurrence of a possible “homogenous” subtype C in this region of Brazil. This finding could contribute to a better characterization of the HIV-1 strains that circulate in the country. Key words: HIV-1; Subtypes; Phylogenetic analysis; Blood donors; Molecular and epidemiological characterization

  18. Distribution of human immunodeficiency virus type 1 subtypes in the State of Amazonas, Brazil, and subtype C identification

    Energy Technology Data Exchange (ETDEWEB)

    Cunha, L.K.H. [Departamento de Parasitologia, Universidade Federal do Amazonas, Manaus, AM (Brazil); Kashima, S.; Amarante, M.F.C.; Haddad, R.; Rodrigues, E.S. [Laboratório de Biologia Molecular, Hemocentro de Ribeirão Preto, Faculdade de Medicina de Ribeirão Preto, Universidade de São Paulo, Ribeirão Preto, SP (Brazil); Silva, K.L.T.; Lima, T.A.; Castro, D.B.; Brito, F.C.; Almeida, E.G. [Diretoria de Ensino e Pesquisa,Fundação de Hematologia e Hemoterapia do Amazonas, Manaus, AM (Brazil); Covas, D.T. [Laboratório de Biologia Molecular, Hemocentro de Ribeirão Preto, Faculdade de Medicina de Ribeirão Preto, Universidade de São Paulo, Ribeirão Preto, SP (Brazil); Malheiro, A. [Departamento de Parasitologia, Universidade Federal do Amazonas, Manaus, AM (Brazil); Diretoria de Ensino e Pesquisa,Fundação de Hematologia e Hemoterapia do Amazonas, Manaus, AM (Brazil)

    2012-01-20

    Few studies have reported the molecular epidemiological characterization of HIV-1 in the Northern region of Brazil. The present study reports the molecular and epidemiological characterization of 31 HIV-1 isolates from blood donors from the State of Amazonas who donated blood between April 2006 and March 2007. Serum/plasma samples from all donors were screened for HIV antibodies by ELISA and the results confirmed by Western blot analysis. Genomic DNA was extracted from the buffy coat using the Super Quik-Gene-DNA Isolation kit. Nested PCR was performed on the env, gag, and pol regions of HIV-1 using the Gene Amp PCR System 9700. Sequencing reactions were performed using the inner PCR primers and the DYEnamic™ ET Dye Terminator Kit, and phylogenetic analysis was performed using the gag, pol, and env gene sequences. We collected samples from 31 blood donors who tested positive for HIV-1 in confirmatory experiments. The male:female ratio of blood donors was 3.4:1, and the mean age was 32.4 years (range: 19 to 61 years). Phylogenetic analysis showed that subtype B is the most prevalent among Northern Brazilian HIV-1-seropositive blood donors. One HIV-1 subtype C and one circulating recombinant form (CRF-BF) of HIV-1 were identified in the State of Amazonas. This is the first study showing the occurrence of a possible “homogenous” subtype C in this region of Brazil. This finding could contribute to a better characterization of the HIV-1 strains that circulate in the country. Key words: HIV-1; Subtypes; Phylogenetic analysis; Blood donors; Molecular and epidemiological characterization.

  19. Distribution of human immunodeficiency virus type 1 subtypes in the state of Amazonas, Brazil, and subtype C identification

    Directory of Open Access Journals (Sweden)

    L.K.H. Cunha

    2012-02-01

    Full Text Available Few studies have reported the molecular epidemiological characterization of HIV-1 in the Northern region of Brazil. The present study reports the molecular and epidemiological characterization of 31 HIV-1 isolates from blood donors from the State of Amazonas who donated blood between April 2006 and March 2007. Serum/plasma samples from all donors were screened for HIV antibodies by ELISA and the results confirmed by Western blot analysis. Genomic DNA was extracted from the buffy coat using the Super Quik-Gene-DNA Isolation kit. Nested PCR was performed on the env, gag, and pol regions of HIV-1 using the Gene Amp PCR System 9700. Sequencing reactions were performed using the inner PCR primers and the DYEnamic™ ET Dye Terminator Kit, and phylogenetic analysis was performed using the gag, pol, and env gene sequences. We collected samples from 31 blood donors who tested positive for HIV-1 in confirmatory experiments. The male:female ratio of blood donors was 3.4:1, and the mean age was 32.4 years (range: 19 to 61 years. Phylogenetic analysis showed that subtype B is the most prevalent among Northern Brazilian HIV-1-seropositive blood donors. One HIV-1 subtype C and one circulating recombinant form (CRF_BF of HIV-1 were identified in the State of Amazonas. This is the first study showing the occurrence of a possible "homogenous" subtype C in this region of Brazil. This finding could contribute to a better characterization of the HIV-1 strains that circulate in the country.

  20. Spatial and seasonal distribution of frogs in three environments in the Serra do Ouro Branco, extreme south of Cadeia do Espinhaço, Minas Gerais, Brazil

    Directory of Open Access Journals (Sweden)

    Vinícius de Avelar São Pedro

    2010-03-01

    Full Text Available We provide information on the spatial and seasonal distribution of frog species in the Serra do Ouro Branco, south Cadeia do Espinhaço, Brazil, from the tracking of three aquatic environments: a pond, a permanent stream and a temporary stream, carried out between July 2006 and June 2007. We found 28 species belonging to the families Brachycephalidae (2, Bufonidae (2, Centrolenidae (1, Cycloramphidae (2, Hylidae (16, Leiuperidae (2, Leptodactylidae (2 and Microhylidae (1. The pond showed the greatest richness (20. Five different reproductive patterns were defined: (1 species that call year-round or almost year-round, with larger aggregations during rainy months, (2 opportunistic species with calling activity associated with the rainy months, (3 species that call predominantly in winter, (4 species with an explosive reproductive pattern, with peaks of calling activity during heavy rains, and (5 species that do not show a definite calling pattern. The reproductive activity of most species was shown to be associated with rainy months, but showed no link to the temperature. There was overlap in the seasonal distribution of some species. The spatial and seasonal species distribution seems to adapt to the biotic and abiotic factors of the environment occupied.

  1. Study of the distribution characteristics of rare earth elements in Solanum lycocarpum from different tropical environments in Brazil by neutron activation analysis

    International Nuclear Information System (INIS)

    In this work, the concentration of eight rare earth elements (REE), La, Ce, Nd, Sm, Eu, Tb, Yb and Lu, was determined by neutron activation analysis (INAA), in plant leaves of Solanum lycocarpum. This species is a typical Brazilian 'cerrado' plant, widely distributed in Brazil. The analysis of the plant reference materials CRM Pine Needles (NIST 1575) and Spruce Needles (BCR 101) proved that the methodology applied was sufficiently accurate and precise for the determination of REE in plants. In order to better evaluate the uptake of the REE from the soil to the plant, the host soil was also analyzed by ESiAA. The studied areas were Salitre, MG, Serra do Cipo, MG, Lagoa da Pampulha and Mangabeiras, in Belo Horizonte, MG, and Cerrado de Emas, in Pirassununga, SP. The results were analyzed through the calculation of transfer factors soil-plant and by using diagrams normalized to chondrites. The data obtained showed different transfer factors from soil to plant as the subtract changes. Similar distribution patterns for the soil and the plant were obtained in all the studied sites, presenting an enrichment of the light REE (La to Sm), in contrast to the heavy REE (Eu to Lu), less absorbed. These results indicate that the light REE remain available to the plant in the more superficial soil layers. The similarity between the distribution patterns indicates a typical REE absorption by this species, in spite of the significant differences in the substratum . (author)

  2. Synanthropic triatomines (Hemiptera, Reduviidae in the state of Pernambuco, Brazil: geographical distribution and natural Trypanosoma infection rates between 2006 and 2007

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    Maria Beatriz Araújo Silva

    2012-02-01

    Full Text Available INTRODUCTION: The present study shows a descriptive analysis of triatomine occurrence and its natural Trypanosoma infection rates in the state of Pernambuco, Brazil, between 2006 and 2007. METHODS: Entomological data for the species, such as specimens captured in both intra and peridomiciles and natural infection index, were obtained via domiciliary capture in 147 municipalities from 11 Regional Managements of Health. The database was obtained from a sample of insects (100% infected and 20% non-infected sent to the Central Laboratory of Pernambuco. RESULTS: A total of 18,029 triatomines were analyzed from 138 municipalities of the state. Triatoma pseudomaculata (35%, Triatoma brasiliensis (34%, and Panstrongylus lutzi (25% were the most captured species. These species also showed a widespread geographical distribution in the state. Panstrongylus megistus, Triatoma petrocchiae, Triatoma melanocephala, Triatoma sordida, Rhodnius nasutus, Rhodnius neglectus, and Triatoma infestans showed more limited geographical distribution and lower relative abundance. The parasitological research showed that 8.8% of the triatomines were naturally infected with flagellates morphologically similar to Trypanosoma cruzi and 91.3% of them were captured inside houses in 113 municipalities. P. lutzi showed the highest rates of natural infection. CONCLUSIONS: After the control of T. infestans, synanthropic species, such as T. brasiliensis, T. pseudomaculata, and P. lutzi, maintain the risk of T. cruzi transmission to humans in the state of Pernambuco. These species are widely distributed, and infected specimens have been found inside houses. Thus, an enhanced surveillance and vector control of Chagas disease is recommended in Pernambuco.

  3. DISTRIBUTION OF TREE AND SHRUBS SPECIES ALONG OF THE SOIL HUMIDITY GRADIENT FROM PUNCTUAL HEADWATERS OF THE SANTA CRUZ STREAM WATERSHED, LAVRAS, SE BRAZIL

    Directory of Open Access Journals (Sweden)

    Lilian Vilela Andrade Pinto

    2005-09-01

    Full Text Available The objective of this research was to verify the distribution of the tree and shrubs species along the soil humiditygradient in the punctual headwaters environment localized at the Santa Cruz stream watershed, Lavras, Minas Gerais State, Brazil.To understanding the vegetation it was performed a structural survey of shrubs and trees stratum of three degraded and disturbedheadwaters. In each sampled headwaters it was instaled 4 plots of 50 x10m located above (P1, below (P2, on the right (P3 and onthe left (P4 of the headwaters. The area around of the headwaters was separated in two gradients of species. The first gradientconsisted in species present in the plot P2, following the river bed and in the firsts 10m length of the plots P1, P3 and P4. The secondgradient comprised of species present in the plots P1, P3 and P4 from of the 10m length of each plot. In the structural surveys they wererecorded 1.217 individuals distributed in 110 species, 80 genus and 43 botanical families. It was concluded that the exclusiveness ofthe species in the distinct gradients, the value of density of the contrasty individuals for the species in the gradients and the model ofspatial distribution of the species along the river bed demonstrated the specificity of the environment to the headwaters. The specificitydemands different strategies for conservation and reclamation of the headwaters.

  4. Distribution of the Orange-winged Parrot Amazona amazonica (Linnaeus, 1766 (Aves, Psittacidae in the coastal region of the State of Paraíba, Brazil

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    Daniela de Carvalho Melo

    2014-08-01

    Full Text Available Fifty-six villages along the coast of the State of Paraíba, Brazil, were visited to determine and map the occurrence of Amazona amazonica (Linnaeus, 1766. Search was conducted with binoculars and the residents of each locality were interviewed using a questionnaire to obtain information about the occurrence and species´s biological data. Reports of recent and old occurrences, absence and feeding areas were registered. The food items mentioned were fruits, such as cashew, cashew nuts, palm oil, and agricultural products, such as corn. The reproductive period occurred between November and December. Breeding sites were mangrove areas and coconut trees, with nests being made in tree hollows. Questionnaires helped to elaborate a distribution map of the species, in which the actual distribution was based on visual records, whilst the potential distribution of the species was based on the questionnaire answers. Furthermore, they provided an overview of the biology of the species in agreement with that reported in the literature. Current data may be used in future studies on the conservation of the species in the State of Paraíba.

  5. Genetic Marker Analysis of a Global Collection of Isolates of Citrus tristeza virus: Characterization and Distribution of CTV Genotypes and Association with Symptoms.

    Science.gov (United States)

    Hilf, Mark E; Mavrodieva, Vessela A; Garnsey, Stephen M

    2005-08-01

    ABSTRACT Genetic markers amplified from three noncontiguous regions by sequence specific primers designed from the partial or complete genome sequences of Citrus tristeza virus (CTV) isolates T3, T30, T36, and VT were used to assess genetic relatedness of 372 isolates in an international collection. Eighty-five isolates were judged similar to the T3 isolate, 81 to T30, 11 to T36, and 89 to VT. Fifty-one isolates were mixed infections by two or more identifiable viral genotypes, and 55 isolates could not be assigned unequivocally to a group defined by marker patterns. Maximum parsimony analysis of aligned marker sequences supported the grouping of isolates on the basis of marker patterns only. Specific disease symptoms induced in select citrus host plants were shared across molecular groups, although symptoms were least severe among isolates grouped by markers with the T30 isolate and were most severe among isolates grouped by markers with the T3 isolate. Isolates assigned the same genotype showed variable symptoms and symptom severity. A classification strategy for CTV isolates is proposed that combines genetic marker patterns and nucleotide sequence data. PMID:18944413

  6. Molecular investigation of zoonotic genotypes of Giardia intestinalis isolates in humans, dogs and cats, sheep, goats and cattle in Araçatuba (São Paulo State, Brazil) by the analysis of ß-giardin gene fragments

    OpenAIRE

    Elenir Alves Macedo de Godoy; Juares Elias Santos Junior; Marcus Vinícius Teresa Belloto; Marcus Vinícius Proença de Moraes; Gustavo Capatti Cassiano; Aline Cardoso Caseca Volotão; Maria Cecília Rui Luvizotto; Claudia Márcia Aparecida Carareto; Mônica Cristina de Moraes Silva; Ricardo Luiz Dantas Machado

    2013-01-01

    In the period from July 2009 to October 2010, fecal samples from 61 animals and 154 humans from the municipality of Aracatuba (São Paulo State, Brazil) were studied. Fecal samples from animals were collected in the Municipal Animal Shelter and the Veterinary Hospital of the Universidade Estadual Paulista. Human fecal specimens were collected in playschools in the outskirts of the city by the private network of clinical analysis laboratories of the municipal. Diagnosis was done by optical mic...

  7. Distribution of throughfall and stemflow in multi-strata agroforestry, perennial monoculture, fallow and primary forest in central Amazonia, Brazil

    Science.gov (United States)

    Schroth, Götz; Ferreira da Silva, Luciana; Wolf, Marc-Andree; Geraldes Teixeira, Wenceslau; Zech, Wolfgang

    1999-07-01

    The partitioning of rain water into throughfall, stemflow and interception loss when passing through plant canopies depends on properties of the respective plant species, such as leaf area and branch angles. In heterogeneous vegetation, such as tropical forest or polycultural systems, the presence of different plant species may consequently result in a mosaic of situations with respect to quantity and quality of water inputs into the soil. As these processes influence not only the water availability for the plants, but also water infiltration and nutrient leaching, the understanding of plant effects on the repartitioning of rain water may help in the optimization of land use systems and management practices. We measured throughfall and stemflow in a perennial polyculture (multi-strata agroforestry), monocultures of peach palm (Bactris gasipaes) for fruit and for palmito, a monoculture of cupuaçu (Theobroma grandiflorum), spontaneous fallow and primary forest during one year in central Amazonia, Brazil. The effect on rain water partitioning was measured separately for four useful tree species in the polyculture and for two tree species in the primary forest. Throughfall at two stem distances, and stemflow, differed significantly between tree species, resulting in pronounced spatial patterns of water input into the soil in the polyculture system. For two tree species, peach palm for fruit (Bactris gasipaes) and Brazil nut trees (Bertholletia excelsa), the water input into the soil near the stem was significantly higher than the open-area rainfall. This could lead to increased nutrient leaching when fertilizer is applied close to the stem of these trees. In the primary forest, such spatial patterns could also be detected, with significantly higher water input near a palm (Oenocarpus bacaba) than near a dicotyledonous tree species (Eschweilera sp.). Interception losses were 6·4% in the polyculture, 13·9 and 12·3% in the peach palm monocultures for fruit and for

  8. 天津市妇女人乳头瘤病毒感染各亚型分布的研究%Study on the Genotype Distributions of Human Papillomavirus Infection in Women of Tianjin

    Institute of Scientific and Technical Information of China (English)

    黎科; 李琳

    2015-01-01

    目的:调查天津市妇女宫颈人乳头瘤病毒(HPV)感染现状和基因各亚型分布情况,为研究宫颈癌疫苗和防治宫颈癌提供依据。方法采用聚合酶链式反应(Polymerase Chain Reaction,PCR)反向点杂交基因芯片技术对6132名做宫颈癌筛查的女性宫颈脱落细胞标本进行HPV基因分型检测,分析HPV在女性人群中的感染率、基因型别和年龄分布特点。结果6132例标本中HPV阳性例数为1296例,总感染率为21.14%。共检测出23种基因亚型,其中高危型18种、低危型5种。高危型HPV52及16感染率最高,分别为11.46%和10.85%,高危型出现次数的排序:52>16>58>53>51;低危型HPV6感染率最高,其次为HPV43。20~29岁及30~39岁组感染率远高于其他年龄组,差异有统计学意义。结论天津市妇女HPV52、16型感染最常见,年轻妇女HPV感染率最高,HPV分型检测在宫颈癌的早期预防、早期诊断具有重要意义。%Objective To provide theoretical basis for the development of vaccine and the treatment of cervical cancer, the status of human papillomavirus (HPV) in cervical cells of Tianjin women was investigated. Methods HPV genotype in 6 132 screening women was detected by human papillomavirus polymerase chain reaction (PCR) types diagnostic kit. The infection rate, genotype and age distribution in the female were analyzed. ResultsThe HPV infection women was 1 296 in screening 6 132 cases and the total infection rate was 21.14%. 23 genotypes were found. 18 kinds of the high risk and 5 kinds of low risk HPV genotypes were detected. The top risk genotypes were HPV52 and HPV16, and their infection rates were 11.46% and 10.85%, respectively. The infection rate of high risk HPV sorted as HPV52>16>58>53>51. The infection rate of HPV6 was highest in the low risk genotypes and was in the second rate for HPV43. The infection rate of 20~29 and 30~39 groups was much higher than that of the other

  9. Avaliação de genótipos de triticale e trigo em ambientes favoráveis e desfavoráveis no Estado de São Paulo Evaluation of triticale and wheat genotypes under favorable and unfavorable environments in the State of São Paulo, Brazil

    Directory of Open Access Journals (Sweden)

    JOÃO CARLOS FELICIO

    2001-01-01

    Full Text Available Avaliou-se a adaptação de 18 genótipos de triticale e dois de trigo em experimentos instalados em dois ambientes, na Estação Experimental de Agronomia do Instituto Agronômico, localizada em Mococa (SP, no período de 1996-99. No primeiro ambiente, aplicou-se a irrigação por aspersão em condição de sequeiro (favorável e, no segundo, várzea úmida com irrigação por inundação (desfavorável. A diversidade entre os ambientes propiciou diferença entre os padrões de resposta dos genótipos. No ambiente irrigado por aspersão, houve maior produtividade para ambas as espécies, sendo o genótipo de triticale TATU 4/ARDI 1 o que apresentou o melhor rendimento de grãos. Na várzea úmida, destacou-se o triticale LT 978.82/ASAD//TARASCA. O IAC 60 (trigo apresentou grande variação no rendimento de grãos de um ano para outro, nas condições de várzea. O ciclo das plantas, da emergência ao espigamento, foi mais longo entre os genótipos de triticale nas condições de várzea úmida, quando comparado ao cultivo irrigado por aspersão. Esses resultados indicam que os genótipos de trigo apresentam adaptação específica para o ambiente de sequeiro com irrigação por aspersão, e o grupo de genótipos de triticale, adaptação mais ampla.The environment adaptation of eighteen triticale and two wheat genotypes were evaluated in experiments carried out at two different sites of the Mococa Agronomy Experimental Station, São Paulo State, Brazil, in the period 1996-99. The favorable environment was provided with sprinkler irrigation on an upland; the unfavorable condition consisted of a moist flat area with basin irrigation system. The environment diversity induced different genotypes response patterns. Under the sprinkler irrigation system the yields were higher for both species, but the triticale genotype TATU 4/ARDI 1 presented the highest grain yield. Under moist and flat area condition the triticale LT 978.82/ASAD//TARASCA showed

  10. Distribution of rare earths, thorium and uranium in bryophytes and soils in Tripui Ecological Station, Minas Gerais, Brazil

    Energy Technology Data Exchange (ETDEWEB)

    Palmieri, Helena E.L. [Centro de Desenvolvimento da Tecnologia Nuclear (CDTN/CNEN-MG), Belo Horizonte, MG (Brazil)], E-mail: help@cdtn.br; Nalini Junior, Herminio A. [Universidade Federal de Ouro Preto (UFOP), MG (Brazil). Dept. de Geologia], E-mail: nalini@degeo.ufop.br; Friese, Kurt [Helmholtz Centre for Environmental Research- UFZ, Magdeburg (Germany). Dept. of Lake Research], E-mail: kurt.friese@ufz.de

    2007-07-01

    The concentrations of rare earth elements (REEs), thorium and uranium were determined in liverworts (Noteroclada confluens (Tayl.) and Dumortirea hirsute (Sw.) Nees), in mosses (Leucobryum martianum (Hornsh.) Hampe, Vesicularia vesicularis (Schwaegr.) Broth., Pyrrhobruym spiniforme (Hedw.) Mitt. and Sematophyllum subsimplex (Hedw.) Mitt.) and in the soil upon which they were growing. The samples were collected on the margins of the main streams of the Tripui Ecological Station, located in the valley of the Tripui stream near the town of Ouro Preto, Minas Gerais State, Brazil. For decades, this Station has been the object of interest of many studies due to its historical, ecological and environmental importance. Analyses in bryophytes (mosses and liverworts) were determined by inductively coupled plasma mass spectrometry (ICP-MS) and in the soil samples by using neutron activation analysis (NAA), specifically the k{sub 0}-standardization method and the energy dispersive spectrometry technique (EDS). Lanthanum (La), cerium (Ce) and neodymium (Nd) were present in higher concentrations in soils and bryophytes than other REEs. It was observed that in all the collected bryophytes species the elements Th, U, Y, La, Ce, Pr, Nd, Sm, Eu, Gd, Tb, Dy, Ho, Er and Yb were transferred from the soil water to these plants. These bryophytes presented different capacities of accumulating these elements with the liverworts (Noteroclada confluens and Dumortirea hirsute) and the moss Leucobryum martianum showing a more efficient accumulation capacity than the other bryophyte species. (author)

  11. Distribution of rare earths, thorium and uranium in bryophytes and soils in Tripui Ecological Station, Minas Gerais, Brazil

    International Nuclear Information System (INIS)

    The concentrations of rare earth elements (REEs), thorium and uranium were determined in liverworts (Noteroclada confluens (Tayl.) and Dumortirea hirsute (Sw.) Nees), in mosses (Leucobryum martianum (Hornsh.) Hampe, Vesicularia vesicularis (Schwaegr.) Broth., Pyrrhobruym spiniforme (Hedw.) Mitt. and Sematophyllum subsimplex (Hedw.) Mitt.) and in the soil upon which they were growing. The samples were collected on the margins of the main streams of the Tripui Ecological Station, located in the valley of the Tripui stream near the town of Ouro Preto, Minas Gerais State, Brazil. For decades, this Station has been the object of interest of many studies due to its historical, ecological and environmental importance. Analyses in bryophytes (mosses and liverworts) were determined by inductively coupled plasma mass spectrometry (ICP-MS) and in the soil samples by using neutron activation analysis (NAA), specifically the k0-standardization method and the energy dispersive spectrometry technique (EDS). Lanthanum (La), cerium (Ce) and neodymium (Nd) were present in higher concentrations in soils and bryophytes than other REEs. It was observed that in all the collected bryophytes species the elements Th, U, Y, La, Ce, Pr, Nd, Sm, Eu, Gd, Tb, Dy, Ho, Er and Yb were transferred from the soil water to these plants. These bryophytes presented different capacities of accumulating these elements with the liverworts (Noteroclada confluens and Dumortirea hirsute) and the moss Leucobryum martianum showing a more efficient accumulation capacity than the other bryophyte species. (author)

  12. Preliminary survey on the distribution of medical equipment and frequency of diagnostic and therapeutic procedures in Brazil: a contribution to the UNSCEAR report

    International Nuclear Information System (INIS)

    Information about Brazil published in the UNSCEAR 2000 report are still scarce when compared to others countries. In this study, a survey on the distribution of medical equipment (X-ray generators, ultrasound, CT and MRI scanners, nuclear medicine equipment and teletherapy and brachytherapy units) and frequency of diagnostic and therapeutic procedures at the various Brazilian States was carried out. The overall information was obtained from a national database supported by the Brazilian Ministry of Health through the Computer Science Department of the National Health System (SUS - Sistema Unico de Saude). The distribution of equipment and the annual frequency of each type of procedure were analyzed considering the five geographical regions that form the country and their respective population. Temporal and regional trends in the annual frequency of procedures for 2000-2007 were also summarized in this study. National annual frequencies for the total of all medical X-ray examinations (259.0 examinations per 1000 population) were evaluated. Some examples can be given from chest, mammography and CT examinations: 67.4, 30.2 and 7.2 per 1000 population, respectively. In addition, annual frequencies for other modalities of diagnostic imaging have also been estimated: 61.5, 1.6 and 1.4 per 1000 population for ultrasound, nuclear medicine and MRI procedures, respectively. A total of 38.7 therapeutic procedures per 1000 population (teletherapy and brachytherapy) are annually performed in the country. The health services localized in Brazil comprised a total number of 253.1 diagnostic imaging equipment per million population, without considering dental X-ray. Amongst them, X-ray equipment used in common radiological examinations (chest, skull, spine, etc.) stands for 39% (97.7 per million). As expected, a significant decrease in the offer of equipment is observed when technologically more sophisticated equipment is concerned: magnetic resonance (3.5 per million), gamma

  13. Biomphalaria species distribution and its effect on human Schistosoma mansoni infection in an irrigated area used for rice cultivation in northeast Brazil

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    Delmany Moitinho Barboza

    2012-09-01

    Full Text Available The role of irrigated areas for the spread of schistosomiasis is of worldwide concern. The aim of the present study was to investigate the spatial distribution of the intermediate snail host Biomphalaria in an area highly endemic for schistosomiasis due to Schistosoma mansoni, evaluating the relationship between irrigation and types of natural water sources on one hand, and the influence of place and time of water exposure on the intensity of human infection on the other. A geographical information system (GIS was used to map the distribution of the intermediate snail hosts in Ilha das Flores, Sergipe, Brazil, combined with a clinical/epidemiological survey. We observed a direct correlation between the intensity of human infection with S. mansoni and irrigation projects. Malacological studies to identify snail species and infection rates showed that B. glabrata is the main species responsible for human schistosomiasis in the municipality, but that B. straminea also plays a role. Our results provide evidence for a competitive selection between the two snail species in rice fields with a predominance of B. glabrata in irrigation systems and B. straminea in natural water sources.

  14. Population biology and distribution of the portunid crab Callinectes ornatus (Decapoda: Brachyura in an estuary-bay complex of southern Brazil

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    Timoteo T. Watanabe

    2014-08-01

    Full Text Available Trawl fisheries are associated with catches of swimming crabs, which are an important economic resource for commercial as well for small-scale fisheries. This study evaluated the population biology and distribution of the swimming crab Callinectes ornatus (Ordway, 1863 in the Estuary-Bay of São Vicente, state of São Paulo, Brazil. Crabs were collected from a shrimp fishing boat equipped with a semi-balloon otter-trawl net, on eight transects (four in the estuary and four in the bay from March 2007 through February 2008. Specimens caught were identified, sexed and measured. Samples of bottom water were collected and the temperature and salinity measured. A total of 618 crabs were captured (332 males, 267 females and 19 ovigerous females, with a sex ratio close to 1:1. A large number of juveniles were captured (77.67%. Crab spatial distributions were positively correlated with salinity (Rs = 0.73, p = 0.0395 and temperature (Rs = 0.71, p = 0.0092. Two peaks of recruitment occurred, in summer and autumn, and ovigerous females were mostly captured during summer, showing a seasonal reproductive pattern. The results showed that C. ornatus uses the bay as a nursery area for juvenile development. Callinectes ornatus is not yet a legally protected species, and the minimum allowed size of crabs caught in the area, although already restricted, should be carefully evaluated since the removal of large numbers of juveniles could negatively impact the local population.

  15. Spatial distribution and concentration assessment of total petroleum hydrocarbons in the intertidal zone surface sediment of Todos os Santos Bay, Brazil.

    Science.gov (United States)

    Silva, Carine S; Moreira, Icaro T A; de Oliveira, Olivia M C; Queiroz, Antonio F S; Garcia, Karina S; Falcão, Brunno A; Escobar, Narayana F C; Rios, Mariana Cruz

    2014-02-01

    The primary objective of this study was to investigate the concentrations and spatial distribution of the total petroleum hydrocarbons (TPHs) in the intertidal zone surface sediment of Todos os Santos Bay, Brazil, to assess the distribution and degree of contamination by TPHs, measure the level of TPH degradation in the surface sediment, and identify the organic matter sources. The surface sediment used in this study was collected in 50 stations, and TPHs, isoprenoid alkanes (pristane and phytane), and unresolved complex mixture (UCM) were analyzed by gas chromatography with a flame ionization detector. The total concentrations ranged from 0.22 to 40,101 μg g(-1) dry weight and showed a strong correlation with the total organic carbon (TOC) content. The highest TPH concentrations were observed in samples from the mangrove sediments of a river located near a petroleum refinery. Compared with other studies in the world, the TPH concentrations in the intertidal surface sediment of Todos os Santos Bay were below average in certain stations and above average in others. An analysis of the magnitude of UCM (0.11 to 17,323 μg g(-1) dry weight) and the ratios nC17/Pr and nC18/Ph suggest that an advanced state of oil weathering, which indicates previous contamination. The molar C/N ratios varied between 5 and 43, which indicate organic matter with a mixed origin comprising marine and continental contributions. PMID:24100798

  16. Influence of Topographic and Hydrographic Factors on the Spatial Distribution of Leptospirosis Disease in São Paulo County, Brazil: An Approach Using Geospatial Techniques and GIS Analysis

    Science.gov (United States)

    Ferreira, M. C.; Ferreira, M. F. M.

    2016-06-01

    Leptospirosis is a zoonosis caused by Leptospira genus bacteria. Rodents, especially Rattus norvegicus, are the most frequent hosts of this microorganism in the cities. The human transmission occurs by contact with urine, blood or tissues of the rodent and contacting water or mud contaminated by rodent urine. Spatial patterns of concentration of leptospirosis are related to the multiple environmental and socioeconomic factors, like housing near flooding areas, domestic garbage disposal sites and high-density of peoples living in slums located near river channels. We used geospatial techniques and geographical information system (GIS) to analysing spatial relationship between the distribution of leptospirosis cases and distance from rivers, river density in the census sector and terrain slope factors, in Sao Paulo County, Brazil. To test this methodology we used a sample of 183 geocoded leptospirosis cases confirmed in 2007, ASTER GDEM2 data, hydrography and census sectors shapefiles. Our results showed that GIS and geospatial analysis techniques improved the mapping of the disease and permitted identify the spatial pattern of association between location of cases and spatial distribution of the environmental variables analyzed. This study showed also that leptospirosis cases might be more related to the census sectors located on higher river density areas and households situated at shorter distances from rivers. In the other hand, it was not possible to assert that slope terrain contributes significantly to the location of leptospirosis cases.

  17. Distribution and conservation of annual fishes (Cyprinodontiformes: Rivulidae) in the municipality of Chuí, southern Brazil

    OpenAIRE

    Matheus Vieira Volcan; Luis Esteban Krause Lanés; Morevy Moreira Cheffe

    2010-01-01

    This study is based on captures of annual fishes conducted from August 2004 to June 2009, aiming at the dissemination of data on their occurrence, distribution and conservation in the municipality of Chuí. Four species were recorded: Austrolebias charrua Costa e Cheffe, Austrolebias luteofl ammulatus (Vaz-Ferreira, Sierra-de-Soriano e Scaglia-de-Paulete), Austrolebias prognathus (Amato) and Cynopoecilus melanotaenia (Regan), captured at 14 different sampling points distributed in the floodpla...

  18. Soils distribution model based on relation between geology, geomorphology and pedology, at the High Plateau of Distrito Federal, Brazil

    OpenAIRE

    Inara Oliveira Barbosa; Marilusa Pinto Coelho Lacerda; Marina Rolim Bilich

    2010-01-01

    Studies of the relation between geology and geomorphic surfaces are important for understanding the soil distribution in the landscape. In the Distrito Federal the scale survey does not evidence some pedologic features. This study aimed to generate a pedological distribution model in Distrito Federal High Plateau with more detailed scale, from the relations between geology, geomorphology and soils. The study area is located in the midwest portion of the Distrito Federal. To generate the soil ...

  19. Caracterização de genótipos de trigo do bloco de cruzamento da Embrapa Trigo, RS, Brasil Characterization of wheat genotypes from the crossing block of the national wheat research center, RS, Brazil

    Directory of Open Access Journals (Sweden)

    Gilberto Peripolli Bevilaqua

    2003-10-01

    Full Text Available No Centro Nacional de Pesquisa de Trigo (CNPT - Embrapa Trigo, em 1999, genótipos de trigo integrantes do bloco de cruzamento foram avaliados quanto à altura de planta, à duração do ciclo até o espigamento, ao comprimento do pedúnculo e ao número de grãos por espiga. Relacionando essas características, foram estudados 122 genótipos em duas épocas de semeadura, que consistiram os blocos. Foram medidos dez pedúnculos do afilho principal, de cada genótipo, e contou-se o número total de grãos de cada espiga. Para a apresentação dos resultados, foram considerados os valores médios dessas avaliações. Para a análise estatística, considerou-se o experimento como blocos casualizados. Dos resultados obtidos, concluiu-se que os genótipos de trigo BR 18, BR 42 e Sonora 64 destacam-se por porte baixo e ciclo precoce, enquanto Florida 301 e "Trigo de chapéu" destacam-se por porte alto e ciclo longo até o espigamento. A altura de planta mostra elevada correlação com comprimento do pedúnculo e duração do ciclo até o espigamento, e esta, com o comprimento de pedúnculo. Os genótipos de trigo CNT 10 e PF 92130 são indicados com finalidades artesanais por suas características de pedúnculo longo e número de grãos por espiga acima da média. O estudo mostra grande variabilidade genotípica em trigo quanto às características avaliadas, fornecendo informações sobre os genótipos que poderão ser utilizados por melhoristas, técnicos e agricultores.Wheat genotypes from the crossing block were caracterized at the National Wheat Research Center (Embrapa Trigo in 1999. Plant traits evaluated were height, cycle up to heading, peduncle length, and number of grains per spike. One hundred and twenty-two genotypes were evaluated at two seeding dates that consisted blocks. For each tretament, ten peduncles from the main tiller were measured and the total number of grain in each spike was counted. The mean values obtained in such

  20. Soils distribution model based on relation between geology, geomorphology and pedology, at the High Plateau of Distrito Federal, Brazil

    Directory of Open Access Journals (Sweden)

    Inara Oliveira Barbosa

    2010-06-01

    Full Text Available Studies of the relation between geology and geomorphic surfaces are important for understanding the soil distribution in the landscape. In the Distrito Federal the scale survey does not evidence some pedologic features. This study aimed to generate a pedological distribution model in Distrito Federal High Plateau with more detailed scale, from the relations between geology, geomorphology and soils. The study area is located in the midwest portion of the Distrito Federal. To generate the soil map it was used geoprocessing tools (GIS supported by field checking. The soil map was obtained from crossing the geoforms (hypsometric and slope with the geology map. The established pattern of soil distribution in the Distrito Federal High Plateau was shown to be representative. The study allowed establishing the relations between the soil classes with geomorphology and defining altimetry classes, slope and geology on the soil occurrence.

  1. Clinical Significance of Hepatitis C Virus Genotypes

    OpenAIRE

    Fatih Yuksel Isiksal

    2000-01-01

    On the basis of phylogenetic analysis of nucleotide sequences, multiple genotypes and subtypes of hepatitis C virus (HCV) have been identified. Characterization of these genetic groups is likely to facilitate and contribute to the development of an effective vaccine against infection with HCV. Differences among HCV genotypes in geographic distributions have provided investigators with an epidemiologic marker that can be used to trace the source of HCV infection in a given population. HCV geno...

  2. USE OF THE DE LIOCOURT QUOTIENT IN THE EVALUATION OF THE DIAMETRIC DISTRIBUTION IN FRAGMENTS OF OMBROPHYLOUS FOREST, PERNAMBUCO STATE-BRAZIL

    Directory of Open Access Journals (Sweden)

    Francisco Tarcísio Alves Junior

    2010-08-01

    Full Text Available Great part of the biodiversity of the ecosystem of tropical forests is being lost even before we have full knowledge of its natural wealth, making it important perform studies that can provide knowledge and the maintenance of its structure, besides making possible the exploration of its products, goods and/or services in a planned and rational form, guaranteeing the continuous flow of these resources. The general objective of this study was to use the De Liocourt quotient in the evaluation of the diametric distribution in fragments of Ombrophylous Forest located in the city of Catende, Pernambuco state - Brazil, having as specific objectives: to describe the diametric structure of the fragments and the species of greater importance using the Value of Importance Index (VI; and to evaluate the degradation and the state of succession of the studied areas. The diametric distribution revealed uneven-aged forests as the diametric curve of distribution resembled a reverse J-shape. The values of basal area in the fragments were of 23.6 and 20.9 m2.ha-1, for Mata das Caldeiras and Mata das Galinhas. The fragments were, on average, in the secondary period of succession. Some species presented difficulties in the rate of recruitment, which could lead to the extinguishing of some species in the future. Species, such as Tapirira guianensis Aubl., Dialium guianense (Aubl. Sandwith and Brosimum discolor Schott, demonstrated a distinct diametric structure among the fragments. The species Plathymenia foliolosa Benth. presented accented discontinuities in the diametric structure in both areas.

  3. Spatial distribution pattern of Mezilaurus itauba (Meins. Taub. Ex mez. in a seasonal forest area of the southern Amazon, Brazil

    Directory of Open Access Journals (Sweden)

    Ebert A

    2016-06-01

    Full Text Available Spatial analysis of forest tree distribution is a powerful tool to respond to basic ecological questions, and represent a useful support to strategies of genetic conservation and sustainable management practices of forest resources. Spatial analysis techniques combined with the use of Geographical Information Systems have been commonly applied to the study of stochastic processes in order to determine the existence of clusters to be related to microenviromental conditions and/or genetic factors. The present study focused on the distribution patterns of individuals of Mezilaurus itauba in a seasonal forest of the southern Amazon, with the aim of providing information about the spatial arrangement of these species at the juvenile and adult stages. Ripley’s K function with radius of 10, 20 and 30 m was used to describe spatial distribution patterns. The hypothesis of complete spatial randomness (CSR of individuals was tested by constructing confidence envelopes for the Ripley’s K function through Monte Carlo simulations using a Poisson homogeneous process. The results obtained suggest a general random distribution of individuals, though a tendency to clustering at close distances was detected for individuals classified as adults (DBH > 50 cm. Contrastingly, a completely randomized spatial pattern was found for juveniles trees (DBH < 50 cm. Our results provide a useful baseline for the development of sustainable management plans and conservation of Mezilaurus itauba, as well as for other economically-exploited, native tree species in the southern Amazon forest.

  4. Analysis of phenotype, genotype and serotype distribution in erythromycin-resistant group B streptococci isolated from vaginal flora in Southern Ireland.

    LENUS (Irish Health Repository)

    Kiely, R A

    2010-02-01

    The screening of 2000 women of childbearing age in Cork between 2004 and 2006 produced 37 erythromycin-resistant group B streptococcus (GBS) isolates. PCR analysis was performed to determine the basis for erythromycin resistance. The ermTR gene was most frequently expressed (n = 19), followed by the ermB gene (n = 8). Four isolates harboured the mefA gene. Six isolates yielded no PCR products. Some phenotype-genotype correlation was observed. All isolates expressing the mefA gene displayed the M phenotype whilst all those expressing ermB displayed the constitutive macrolide resistance (cMLS(B)) phenotype. Of 19 isolates that expressed the ermTR gene, 16 displayed the inducible macrolide resistance (iMLS(B)) phenotype. Serotype analysis revealed that serotypes III and V predominated in these isolates. The identification of two erythromycin-resistant serotype VIII isolates among this collection represents the first reported finding of erythromycin resistance in this serotype. A single isolate was non-typable using two latex agglutination serotyping kits.

  5. Morphological changes and virus distribution in the ileum of colostrum-deprived calves inoculated with non-cytopathic bovine viral diarrhoea virus genotype-1.

    Science.gov (United States)

    Pedrera, M; Sánchez-Cordón, P J; Romero-Trevejo, J L; Risalde, M A; Greiser-Wilke, I; Núñez, A; Gómez-Villamandos, J C

    2009-07-01

    Eight colostrum-deprived calves were inoculated intranasally with a non-cytopathic strain of bovine viral diarrhoea virus (BVDV) genotype-1 and killed in batches of two at 3, 6, 9 and 14 days post-inoculation (dpi). Two non-inoculated animals with similar background served as controls. All infected calves developed mild pyrexia and transient leucopenia due primarily to lymphopenia. Viraemia was correlated with body temperature and inversely related to leucocyte count. Ileal Peyer's patches developed mild follicular lymphoid depletion from 3dpi. This change was accompanied by cellular fragmentation and pyknosis, characteristic of apoptosis, which was most prominent from 6dpi. Lymphocyte apoptosis was confirmed by ultrastructural examination. Stellate cells and macrophages located in the lymphoid follicles were identified as infected by virus from 3dpi and the number of these infected cells increased until 9dpi. Fewer lymphocytes expressed BVDV antigen. Macrophages had morphological features consistent with activation of secretory and phagocytic function from 3dpi. These findings suggest that BVDV is only directly responsible for the destruction of a small number of lymphocytes. Although lymphocyte infection coincided with the onset of apoptosis, the intensity of infection was disproportionate to the marked depletion of gut-associated lymphoid tissue, particularly during the early stages of this process. Characterization of the indirect pathogenic mechanisms involved in the lymphoid depletion associated with BVDV infection will require additional study. PMID:19406434

  6. Modeling of spatial distribution for scorpions of medical importance in the São Paulo State, Brazil

    Directory of Open Access Journals (Sweden)

    José Brites-Neto

    2015-07-01

    Full Text Available Aim: In this work, we aimed to develop maps of modeling geographic distribution correlating to environmental suitability for the two species of scorpions of medical importance at São Paulo State and to develop spatial configuration parameters for epidemiological surveillance of these species of venomous animals. Materials and Methods: In this study, 54 georeferenced points for Tityus serrulatus and 86 points for Tityus bahiensis and eight environmental indicators, were used to generate species distribution models in Maxent (maximum entropy modeling of species geographic distributions version 3.3.3k using 70% of data for training (n=38 to T. serrulatus and n=60 to T. bahiensis and 30% to test the models (n=16 for T. serrulatus and n=26 for T. bahiensis. The logistic threshold used to cut models in converting the continuous probability model into a binary model was the “maximum test sensitivity plus specificity,” provided by Maxent, with results of 0.4143 to T. serrulatus and of 0.3401 to T. bahiensis. The models were evaluated by the area under the curve (AUC, using the omission error and the binomial probability. With the data generated by Maxent, distribution maps were produced using the “ESRI® ArcGIS 10.2.2 for Desktop” software. Results: The models had high predictive success (AUC=0.7698±0.0533, omission error=0.2467 and p<0.001 for T. serrulatus and AUC=0.8205±0.0390, omission error=0.1917 and p<0.001 for T. bahiensis and the resultant maps showed a high environmental suitability in the north, central, and southeast of the state, confirming the increasing spread of these species. The environmental variables that mostly contributed to the scorpions species distribution model were rain precipitation (28.9% and tree cover (28.2% for the T. serrulatus and temperature (45.8% and thermal amplitude (12.6% for the T. bahiensis. Conclusion: The distribution model of these species of medical importance scorpions in São Paulo State

  7. Distribution and conservation of annual fishes (Cyprinodontiformes: Rivulidae in the municipality of Chuí, southern Brazil

    Directory of Open Access Journals (Sweden)

    Matheus Vieira Volcan

    2010-12-01

    Full Text Available This study is based on captures of annual fishes conducted from August 2004 to June 2009, aiming at the dissemination of data on their occurrence, distribution and conservation in the municipality of Chuí. Four species were recorded: Austrolebias charrua Costa e Cheffe, Austrolebias luteofl ammulatus (Vaz-Ferreira, Sierra-de-Soriano e Scaglia-de-Paulete, Austrolebias prognathus (Amato and Cynopoecilus melanotaenia (Regan, captured at 14 different sampling points distributed in the floodplains of Chuí and São Miguel streams, near the road of Barra do Chuí. All ponds where annual fishes were recorded in Chuí were altered by some form of human activity, arising mainly from rice culture and trampling by cattle. The main area of annual fish occurrence in the municipality that is most relevant to conservation is located in the floodplain of the Chuí stream.

  8. Diversity and distribution of sandflies (Diptera: Psychodidae: Phlebotominae in a military area in the state of Amazonas, Brazil

    Directory of Open Access Journals (Sweden)

    Luís Henrique Monteiro Gomes

    2013-08-01

    Full Text Available This study reports the distribution, ecotopes and fauna diversity of sandflies captured in five training bases on a military reserve in Manaus, state of Amazonas (AM. A total of 10,762 specimens were collected, which were distributed among 58 species, with the highest number recorded at Base Instruction 1 (BI1. A higher rate of species richness was found at the Base Instruction Boina Rajada and low levels of diversity associated with a high abundance index with the clear dominance of Lutzomyia umbratilis, Lutzomyia ruii and Lutzomyia anduzei were found at BI1. The abundance of Lu. umbratilis raises the possibility of outbreaks of American cutaneous leishmaniasis by the main vector of the disease in AM.

  9. Distribution and growth in adults of Macrobrachium acanthurus Wiegmann, (Decapoda, Palaemonidae) in a tropical coastal lagoon, Brazil

    OpenAIRE

    Edélti Faria Albertoni; Cleber Palma-Silva; Francisco de Assis Esteves

    2002-01-01

    Macrobrachium acanthurus Wiegmann, 1836 is a Palaemonidae commonly found in Brazilian coastal environments. At Imboassica lagoon, located in the north of the State of Rio de Janeiro, it is found in two stages of its life cycle: as larvae and as reproductive adults. This work had as its goal the evaluation of adults distribution, estimating the weight/length relationship and the condition factor of these adults. After sampling in two regions of the lagoon, one interior and another closer to th...

  10. Spatial distribution pattern of Mezilaurus itauba (Meins.) Taub. Ex mez. in a seasonal forest area of the southern Amazon, Brazil

    OpenAIRE

    Ebert A; Brito Da Costa R; Brondani GE

    2016-01-01

    Spatial analysis of forest tree distribution is a powerful tool to respond to basic ecological questions, and represent a useful support to strategies of genetic conservation and sustainable management practices of forest resources. Spatial analysis techniques combined with the use of Geographical Information Systems have been commonly applied to the study of stochastic processes in order to determine the existence of clusters to be related to microenviromental conditions and/or genetic facto...

  11. Modeling of spatial distribution for scorpions of medical importance in the São Paulo State, Brazil

    OpenAIRE

    José Brites-Neto; Keila Maria Roncato Duarte

    2015-01-01

    Aim: In this work, we aimed to develop maps of modeling geographic distribution correlating to environmental suitability for the two species of scorpions of medical importance at São Paulo State and to develop spatial configuration parameters for epidemiological surveillance of these species of venomous animals. Materials and Methods: In this study, 54 georeferenced points for Tityus serrulatus and 86 points for Tityus bahiensis and eight environmental indicators, were used to generate specie...

  12. Distribution of Neotropical Otter, Lontra longicaudis (Olfers, 1818 (Mustelidae in Coastal Islands Of Santa Catarina, Southern Brazil

    Directory of Open Access Journals (Sweden)

    Oldemar Carvalho-Junior,

    2012-01-01

    Full Text Available This study presents the distribution of neotropical otters (Lontra longicaudis in coastal islands of Santa Catarina State. A total of 23 islands were surveyed, through 46 field trips. Otter's signs were found in 9 islands, representing 39% of the total. It is believed that the Lontra longicaudis use these islands as a support for its movement from one place to another. The results could be indicating the existence of a coastal ecological corridor used by the neotropical otter.

  13. High sensitivity C-reactive protein distribution in the elderly: the Bambuí Cohort Study, Brazil

    Directory of Open Access Journals (Sweden)

    L.G.S. Assunção

    2012-12-01

    Full Text Available The measurement of the serum concentration of the acute-phase reactant C-reactive protein (CRP provides a useful marker in clinical practice. However, the distribution of CRP is not available for all age and population groups. This study assessed the distribution of high sensitivity-CRP (hs-CRP by gender and age in 1470 elderly individuals from a Brazilian community that participates in the Bambuí Cohort Study. Blood samples were collected after 12 h of fasting and serum samples were stored at -70°C. Measurements were made with a commercial hs-CRP immunonephelometric instrument. More than 50% of the results were above 3.0 mg/L for both genders. Mean hs-CRP was higher in women (3.62 ± 2.58 mg/L than in men (3.03 ± 2.50 mg/L. This difference was observed for all ages, except for the over-80 age group. This is the first population-based study to describe hs-CRP values in Latin American elderly subjects. Our results indicate that significant gender differences exist in the distribution of hs-CRP, and suggest that gender-specific cut-off points for hs-CRP would be necessary for the prediction of cardiovascular risks.

  14. High sensitivity C-reactive protein distribution in the elderly: the Bambuí Cohort Study, Brazil

    International Nuclear Information System (INIS)

    The measurement of the serum concentration of the acute-phase reactant C-reactive protein (CRP) provides a useful marker in clinical practice. However, the distribution of CRP is not available for all age and population groups. This study assessed the distribution of high sensitivity CRP (hs-CRP) by gender and age in 1470 elderly individuals from a Brazilian community that participates in the Bambuí Cohort Study. Blood samples were collected after 12 h of fasting and serum samples were stored at -70°C. Measurements were made with a commercial hs-CRP immunonephelometric instrument. More than 50% of the results were above 3.0 mg/L for both genders. Mean hs-CRP was higher in women (3.62 ± 2.58 mg/L) than in men (3.03 ± 2.50 mg/L). This difference was observed for all ages, except for the over-80 age group. This is the first population-based study to describe hs-CRP values in Latin American elderly subjects. Our results indicate that significant gender differences exist in the distribution of hs-CRP, and suggest that gender-specific cut-off points for hs-CRP would be necessary for the prediction of cardiovascular risks

  15. Distribution and Schistosoma mansoni infection of Biomphalaria glabrata in different habitats in a rural area in the Jequitinhonha Valley, Minas Gerais, Brazil: environmental and epidemiological aspects.

    Science.gov (United States)

    Kloos, Helmut; Passos, Liana Kanovaloff Janotti; Loverde, Philip; Oliveira, Rodrigo Correa; Gazzinelli, Andréa

    2004-11-01

    This paper examines the distribution and infection of Biomphalaria glabrata with Schistosoma mansoni in all aquatic snail habitats in a rural area in the state of Minas Gerais, Brazil, in relation to physico/biotic and behavioral factors. Snail and environmental surveys were carried out semi-annually between July 2001 and November 2002 at 106 sites. Collected snails were examined in the laboratory for infection. B. glabrata densities were highest in overflow ponds, irrigation ponds, springs, canals and wells, and lowest in fishponds and water tanks. Snail densities were higher during the hot, rainy season except for streams and canals and were statistically associated with the presence of fish, pollution, and vegetation density. Tilapia fish and an unidentified Diptera larva were found to be predators of B. glabrata but ducks were not. Twenty-four of the 25 infected snails were collected in 2001(1.4% infection rate) and only one in 2002, after mass chemotherapy. The occurrence of B. glabrata in all 11 snail habitats both at and away from water contact sites studied indicates widespread risk of human infection in the study area. In spite of the strong association between B. glabrata and tilapia in fishponds we do not recommend its use in schistosomiasis control for ecological reasons and its relative inefficiency in streams and dams. PMID:15654420

  16. Distribution and factors associated with Fasciola hepatica infection in cattle in the south of Espírito Santo State, Brazil

    Directory of Open Access Journals (Sweden)

    Alves DP

    2011-01-01

    Full Text Available Fasciolosis is a disease that affects the liver parenchyma and bile ducts of numerous animals, including humans, which causes economic losses and threatens public health. The present work aimed at reporting the distribution and factors connected with Fasciola hepatica infection in cattle in ten municipalities in southern Espírito Santo, Brazil, between 2008 and 2009. During this period, 50 rural properties in ten cities were analyzed and fecal samples from 10% of the cattle on each farm were collected. Of the 717 samples analyzed, 154 (21.33% presented Fasciola hepatica eggs. As for the 50 rural properties studied, 32 (64% had animals positive for fasciolosis. Throughout the evaluation, it was observed that 42 (84% rural properties had flooded areas, 33 (66% were located at altitudes less than 226 meters, in 36 (72% mollusks were found, 47 (94% had other definitive hosts (horses, sheep, goats and 25 (50% had previous cases of bovine fasciolosis. The present results showed a high rate of bovine fasciolosis in the analyzed region whereas infected animals are present in all the municipalities. Based on statistical analysis, it was concluded that there was an association between the presence of flooded areas and other definitive hosts in rural properties where bovine fasciolosis was detected.

  17. Evapotranspiration and energy balance components spatial distribution in the north region of Minas Gerais, Brazil, using the SEBAL model and Landsat 5 TM images

    Science.gov (United States)

    Gomide, Reinaldo L.; de Paula Boratto, Isa Maria

    2014-10-01

    The determination of crop evapotranspiration (ETc) values is very useful information for planning irrigation, water supply estimation, regulation of water rights and river basins hydrologic studies. Values of ETc in the North region of Minas Gerais state, Brazil, were estimated in this research from the multispectral images of the Landsat 5 TM by means of the model Surface Energy Balance Algorithm for Land- SEBAL, based on the simplified energy balance equation of a surface covered by vegetation, using a few daily surface climatological parameters (wind speed, rainfall, air temperature and relative humidity, solar radiation). The aim of this study was to estimate the regional spatial distribution of the energy balance components and evapotranspiration in the study area, covering the irrigated perimeter of Gorutuba, involving the cities of Nova Porteirinha, Janaúba, Porteirinha, Verdelândia and Pai Pedro. Thematic maps of regional evapotranspiration and energy balance components were generated from spectral analyzes of the images obtained, associated with the used weather data. The ability of SEBAL to provide the spatial variability of energy balance components, including evapotranspiration, demonstrated its sensitivity to different occupation of the soil surface vegetation, and to high data temporal and spatial resolutions data, indicating that the SEBAL model can be used in scales and operational routine for north region of Minas Gerais.

  18. Distribution of 226Ra, 232Th and 40K in soils and sugar cane crops at Corumbatai river basin, Sao Paulo State, Brazil

    International Nuclear Information System (INIS)

    The common use of phosphate fertilizers NPK and amendments in sugar cane crops in Brazilian agriculture may increase the 226Ra, 232Th and 40K activity concentrations in soils and their availability for plants and human food chain. Thus, the main aim of this study was to evaluate the distribution of 226Ra, 232Th and 40K in soils and sugar cane crops in the Corumbatai river basin, Sao Paulo State, Brazil. The gamma spectrometry was utilized to measure the 226Ra, 232Th and 40K activity concentration in all samples. The soil-to-sugar cane transfer factors (TF) were quantified using the ratio between the radionuclide activity concentration in sugar cane and its activity concentration in soil. The results show that, although radionuclides incorporated in phosphate fertilizers and amendments are annually added in the sugar cane crops, if utilized in accordance with the recommended rates, their use does not lead to hazards levels in soils. The soil-to-sugar cane transfer of radionuclides occurred in the following order 40K>226Ra>232Th. Therefore, under these conditions, radionuclides intake through consumption of sugar is not hazardous to human health.

  19. Distribution and Schistosoma mansoni infection of Biomphalaria glabrata in different habitats in a rural area in the Jequitinhonha Valley, Minas Gerais, Brazil: environmental and epidemiological aspects

    Directory of Open Access Journals (Sweden)

    Helmut Kloos

    2004-11-01

    Full Text Available This paper examines the distribution and infection of Biomphalaria glabrata with Schistosoma mansoni in all aquatic snail habitats in a rural area in the state of Minas Gerais, Brazil, in relation to physico/biotic and behavioral factors. Snail and environmental surveys were carried out semi-annually between July 2001 and November 2002 at 106 sites. Collected snails were examined in the laboratory for infection. B. glabrata densities were highest in overflow ponds, irrigation ponds, springs, canals and wells, and lowest in fishponds and water tanks. Snail densities were higher during the hot, rainy season except for streams and canals and were statistically associated with the presence of fish, pollution, and vegetation density. Tilapia fish and an unidentified Diptera larva were found to be predators of B. glabrata but ducks were not. Twenty-four of the 25 infected snails were collected in 2001(1.4% infection rate and only one in 2002, after mass chemotherapy. The occurrence of B. glabrata in all 11 snail habitats both at and away from water contact sites studied indicates widespread risk of human infection in the study area. In spite of the strong association between B. glabrata and tilapia in fishponds we do not recommend its use in schistosomiasis control for ecological reasons and its relative inefficiency in streams and dams.

  20. A note on the distribution of genetic diversity of Anglo-Nubian goats in central-northern farms of Piauí, Brazil

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    Ellida de Aguiar Silvestre

    2015-04-01

    Full Text Available The objective of this study was to characterize the genetic variability of Anglo-Nubian goats using microsatellite markers. The study was conducted using herds from four municipalities of Central-Northern Piauí (Teresina, José de Freitas, Campo Maior, and Angical, where technical information is scarce. Seven markers suggested by FAO were used (ILSTS11, McM527, INRA23, ETH10, OarfCB304, OarfCB48, and MAF209. The samples were genotyped using a 7% polyacrylamide gel. The average number of alleles per locus was 4.0, with observed and expected heterozygosity of 0.38 and 0.55, respectively. Few deviations from the Hardy-Weinberg equilibrium were observed for each population. Only two loci deviated significantly in two localities. The coefficient of gene differentiation (GST' indicated that 11.9% of the genetic variation was distributed among populations, and according to the coefficient of inbreeding (GIS = 0.23 and FIS = 0.23, there is a deficiency of heterozygotes within populations. These findings corroborate the Bayesian analyses performed with the STRUCTURE software, which revealed three distinct and moderately structured groups. The graphic analysis showed that Teresina and José de Freitas are isolated groups, while Angical and Campo Maior share most of their alleles. Despite this, the level of diversity among herds was low. Based on this genetic structure, exchange of reproducers among municipalities is recommended for the maintenance of the breed.

  1. Legislation perspectives about social assistance programs for electricity distribution networks extensions. Considerations from ELETROPAULO case study, Sao Paulo, Brazil

    International Nuclear Information System (INIS)

    The central issue of debate was the need to align the energy sector's options and organization with changing global patterns of economic and social development, characterized by the increasing role played by the private sector, greater integration in the world economy, and new economic and social priorities such as efficiency, decentralization, deregulation, and a closer attention to environmental issues. The aim of the work was to present legislation perspectives about social assistance programs for electricity distribution networks extensions considering a Brazilian electric utility case study

  2. Distribution of 226Ra, 232Th, and 40K in soils of Rio Grande do Norte (Brazil)

    International Nuclear Information System (INIS)

    A survey programme aimed at studying the environmental radioactivity in the Brazilian state of Rio Grande do Norte was undertaken. Fifty-two soil samples, together with two rock and two uraniferrous ore samples were collected from the eastern and central regions of this state. Concentrations of radioelements in samples were determined by γ-ray spectrometry. The average concentrations of 226Ra, 232Th, and 40K in the surveyed soils were 29.2 ± 19.5 (SD), 47.8 ± 37.3, and 704 ± 437 Bq kg-1, respectively. Higher values were found in the rock samples. The distributions of 226Ra and 232Th were fitted by log-normal curves. Radiological measurements carried out with a portable scintillometer at the sampled sites revealed an average absorbed dose rate of 55 ± 27 (SD) nGy h-1. Computed dose rates obtained through the Beck formula ranged from 15-179 nGy h-1, with a mean value of 72.6 ± 38.7 (SD) nGy h-1, and their distribution fitted a log-normal curve. An annual average effective dose equivalent of 552 μSν (range: 117-1361 μSν) was estimated for 51 sites in Rio Grande do Norte. (author)

  3. Time and latitudinal distribution of the ionospheric irregularities in Brazil, through the VHF-scintillation and ionogram data analysis

    International Nuclear Information System (INIS)

    Equatorial ionospheric irregularity distribution morphology, and dynamics, and the dynamics of the ambient ionosphere were investigated. Spread F data from ionograms over Fortaleza (40S; 380O) and Cachoeira Paulista (22,70S; 450O), and simultaneous VHF scintillations of geoestationary satellite beacon received over Natal (5,60S; 33,70O) were used to determine the irregularity local time versus seasonal distribution, over the equatorial and low latitude location, during the solar activity maximum as well as minimum epochs. Concept of flux tube alignment properties of the transequatorial plasma bubbles were used to determine statistical features of the plasma bubble rise velocities. Calculations of plasma bubble rise velocities were then carried out for different solar activity epochs and compared with prereversal enhancement amplitude in the F-layer vertical rise velocities, for the same epochs. Using theoretical considerations on the development of plasma bubble based on flux tube integrated properties, the observed dependence of the plasma bubble rise velocities and the F-region dynamo electric field has been analysed to estimate the average ionizations depletions in the plasma bubble. Possible causes for the lack of correlation often observed between bubble rise velocities and F-Layer velocities also are discussed. (Author)

  4. Influência do ambiente no rendimento e na qualidade de grãos de genótipos de trigo com irrigação por aspersão no Estado de São Paulo Environmental influence on grain yield and grain quality of wheat genotypes with sprinkler irrigation in the State of São paulo, Brazil

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    JOÃO CARLOS FELICIO

    2001-01-01

    Full Text Available Avaliaram-se a influência do ambiente em 20 genótipos de trigo, no rendimento e qualidade de grãos, a adaptabilidade e a reação a doenças, em regiões onde a irrigação se faz necessária para permitir o bom desempenho agronômico de um genótipo. Instalaram-se os experimentos em Tatuí, Votuporanga, Ribeirão Preto e Mococa, Estado de São Paulo, no período de 1995-98. Avaliaram-se, também, a tolerância dos genótipos ao alumínio tóxico em solução nutritiva e a qualidade industrial para panificação. Com bom rendimento de grãos destacaram-se: em Tatuí, os genótipos IAC 351, IAC 335, IAC 289 e Mochis; em Votuporanga, IAC 289, TUI"S" e SERI*3/BUC; em Ribeirão Preto e Mococa, o IAC 370. No conceito de genótipo ideal, o IAC 370 apresentou alta capacidade produtiva, foi responsivo à melhoria do ambiente e sensível às condições desfavoráveis do ambiente. Entre as doenças, a ferrugem-da-folha foi a de abrangência generalizada com maior incidência em Tatuí. Anahuac, IAC 287, CAL/CHKW//VEE"S" e IAC 370 foram os mais suscetíveis ao oídio. Os genótipos Anahuac, IAC 287, JCAM//EMU"S"/YACO"S", PFAU e IAC 339 foram os mais sensíveis à toxicidade por Al3+. Os genótipos Anahuac, IAC 24, IAC 287, IAC 289, IAC 334, PFAU, TUI"S", IAC 339, IAC 370 e IAC 351 apresentaram características de farinha com bom potencial para panificação.Environmental influence was evaluated in 20 wheat genotypes in relation to grain yield and quality, adaptability and disease reaction in regions where irrigation is necessary for good agronomical performance. The experiments were carried out at Tatuí, Votuporanga, Ribeirão Preto, and Mococa in the State of São Paulo, Brazil, during 1995-98. Genotypes were also evaluated for tolerance to aluminum toxicity in nutrient solutions and for industrial quality for bread production. The genotypes IAC 351, IAC 335, IAC 289 and Mochis presented high grain yield in Tatuí; IAC 289, TUI"S" and SERI*3/BUC in

  5. Identificação de Genótipos de Feijão-caupi Tolerantes a Acidez em um Latossolo Vermelho-Amarelo do Estado de Roraima = Identification of cowpea genotypes sensitivity to acidicy conditions in an Oxisol of Roraima State (Brazil.

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    Sandra Cátia Pereira Uchôa

    2007-12-01

    Full Text Available O presente trabalho foi realizado com o objetivo de identificar genótipos de feijão-caupi (Vigna unguiculata (L Walp., tolerantes à acidez. O trabalho foi realizado em casa de vegetação localizada no Campus do Cauamé, da Universidade Federal de Roraima, utilizando um Latossolo Vermelho-Amarelo de Boa Vista-RR. Foi adotado o delineamento experimental de Blocos Inteiramente Casualizados em esquema fatorial 2 x 5 x 10 com três repetições. Os tratamentos resultaram de duas formas de localização do calcário (localizada e não-localizada, 5 profundidades (0-5; 5-10; 10-15; 15-20; 20-25 cm e 10 genótipos de feijão-caupi(IT85D-3428-4-R2,4-HM; Apiaú; Hikari Graúdo; Pretinho Precoce 1; IT85D-3428-4-3-HP; USA; UFRR Grão Verde; BRS-Mazagão; Canapum e Sempre Verde. A unidade experimental foi constituída por 2dm3 de solo, dispostos em tubo de PVC com 25cm de altura,10cm de diâmetro e duas plantas de feijão. Os tubos foram confeccionados por meio da junção de 5 anéis com 5 cm cada, sendo que no anel inferior foi colocada uma placa delgada de isopor para permitir a acomodação do solo. Aos 40 dias após a emergência, as plantas foram coletadas, sendo determinada à produção de matéria seca das raízes e parte aérea. Os genótipos IT85D-3428-4-3-HP e UFRRGRÃO VERDE foram classificados como sendo de baixa tolerância, os genótipos USA, BRS-Mazagão, IT85D-3428-4-R2,4-HM e Sempre Verde, medianamente tolerantes e os genótipos Apiaú, Hikari Graúdo, Pretinho Precoce 1 e Canapum, tolerantes à acidez.= This research was carried out objecting to identify the sensibility of cowpea (Vigna unguiculata (L Walp genotypes to acidity conditions. The experiment was installed in a greenhouse located at Campus of Cauamé (Universidade Federal de Roraima in an oxisol of Roraima State (Brazil. The experimental design adopted was a completely andomized blocks in a factorial scheme 2 x 5 x 10 with three replicates. The terms of this factorial

  6. Genetic diversity of noroviruses in Brazil

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    Julia Monassa Fioretti

    2011-12-01

    Full Text Available Norovirus (NoV infections are a major cause of acute gastroenteritis outbreaks around the world. In Brazil, the surveillance system for acute diarrhoea does not include the diagnosis of NoV, precluding the ability to assess its impact on public health. The present study assessed the circulation of NoV genotypes in different Brazilian states by partial nucleotide sequencing analysis of the genomic region coding for the major capsid viral protein. NoV genogroup II genotype 4 (GII.4 was the prevalent (78% followed by GII.6, GII.7, GII.12, GII.16 and GII.17, demonstrating the great diversity of NoV genotypes circulating in Brazil. Thus, this paper highlights the importance of a virological surveillance system to detect and characterize emerging strains of NoV and their spreading potential.

  7. Distribution of histological diagnoses of black and white skin in Campinas, diseases Brazil, from 1993 to 2009

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    Isabela Mamere Alvarez

    2013-08-01

    Full Text Available INTRODUCTION: Little is known about ethnic differences in the frequency of skin diseases, and even less in terms of Brazilian population, which is characterized by miscegenation. OBJECTIVE: To evaluate the distribution of skin disorders in black and Caucasian patients through pathological specimens. METHODS: 826 biopsies from black-skinned individuals and 1,652 from white-skinned patients were retrieved and studied from the files of the Pathology Department, UNICAMP Hospital within the period of 1993-2009. The clinical data were obtained from medical records and the results were tested by statistical methods. RESULTS: Non-melanoma cancer was the most frequent diagnosis in Caucasians (45%, differing from the frequency among black patients (8%, both arising in sun-exposed skin. Regarding topography and age, in white-skinned patients aged over 50 years, biopsies of "head and neck" prevailed. As to black patients, the disease predominated among female individuals aged from 15 to 50 years and in the genital area. In the comparative analysis of vulvar diseases, we observed differences in diagnoses of sexually transmitted diseases more common among black women. Excluding cancers and genital lesions, black patients had a higher percentage of infectious diseases. Among the non-infectious diseases, cutaneous lupus was the most frequent diagnosis in both groups. Lichen planus and drug reactions were more frequent in black patients. CONCLUSION: Apart from intrinsic differences among skin types, social factors may interfere in the distribution of diseases. Not only may these results be useful to public health programs, but they may also aid the approach to dermatological diseases in black skin patients.

  8. Interação genótipo x ambiente em cultivares de alface na região de Jaboticabal Interaction genotype x environment of lettuce cultivars in Jaboticabal, Brazil

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    Eduardo B. de Figueiredo

    2004-03-01

    Full Text Available Estudou-se a interação genótipo x ambiente de doze cultivares de alface, sendo quatro do grupo lisa (Babá de Verão, Karla, Nacional e Elisa, quatro do grupo crespa (Simpson, Hortência, Verônica e Grand Rapids e quatro do grupo americana (Laidy, Tainá, Lucy Brown e Raider. Os tratamentos foram constituídos pelo cultivo da alface em dez ambientes (casa de vegetação, túnel baixo de cultivo, túnel baixo com sombrite, agrotêxtil e campo, na presença e ausência de mulching. Foram utilizados dois períodos de cultivo, agosto a novembro de 2001 e março a junho de 2002 em Jaboticabal. Cada experimento (ambiente de cultivo foi conduzido utilizando-se o delineamento de blocos casualizados, com doze cultivares e três repetições. A análise de variância conjunta demonstrou valores de F significativos (pWe evaluated the interaction genotype x environment of twelve genotypes of lettuce (Babá de Verão, Karla, Nacional, Elisa, Simpson, Hortência, Verônica, Grand Rapids, Laidy, Tainá, Lucy Brown and Raider, cultivated under greenhouse, low tunnel, low tunnel covered with black plastic screen, floating row cover (light-weight woven and open field. All these treatments were conducted with and without mulching with ten treatments in total. The experiments were conducted in two different periods (August to November, 2001 and March to June, 2002. Each experiment (growth environment was conducted using randomized blocks and three replicates. The measured variables were dry matter, volume and number of leaves. The value of F was significant (p<0,01 for the interaction genotype x environment. For the planting period from August to November/2001, the best results were obtained with the butterhead cultivars (Babá de Verão, Karla, Nacional, Elisa, cultivated under greenhouse with mulching, low tunnel without mulching and field without mulching. All cultivars had the worst performance when cultivated under tunnel with black plastic screen with or

  9. Desempenho agronômico de genótipos de girassol no norte de Minas Gerais = Agronomic performance of sunflower genotypes in the north of Minas Gerais, Brazil.

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    Danúbia Aparecida Costa Nobre

    2012-08-01

    Full Text Available O girassol (Helianthus annuus L. encontra-se entre as quatro culturas de maior produção de óleo comestível no mundo, e destaca-se pela sua adaptação a diferentes condições edafoclimáticas. Objetivou-se com este estudo avaliar o desempenho agronômico de dez genótipos de girassol no norte de Minas Gerais. O estudo foi conduzido nas Fazendas Experimentais da Empresa de Pesquisa Agropecuária de Minas Gerais (Epamig, nos municípios de Jaíba, distrito de Mocambinho e NovaPorteirinha. Fez-se a avaliação do desempenho agronômico destes genótipos analisando as seguintes características: floração inicial, altura das plantas, diâmetro da haste, número de folhas,circunferência do capítulo, estande final e rendimento de grãos. Os dados coletados foram submetidos à análise de variância e ao teste de Scott-Knott a 5% de probabilidade. Houve variação em todos os parâmetros avaliados no comportamento agronômico dos genótipos, os quais apresentaram bom desempenho quando cultivados em Mocambinho e Nova Porteirinha, no norte de Minas Gerais. Os genótipos avaliados apresentam ciclo precoce, exceto o SYN 039A, com ciclo médio. Com a redução do ciclo da cultura, observa-se também redução na maioria das variáveis avaliadas.The sunflower (Helianthus annuus L. is one of the four cultures of the largest production of edible oil worldwide, and stands out for its adaptation to different edafoclimatic conditions. The objective of this study was to evaluate the agronomic performance of ten cultivars of sunflower in northern Minas Gerais. The study was conducted at the Experimental Farms of the Agricultural Research Company of Minas (Epamig in the municipalities of Jaíba, District of Mocambinho and Nova Porteirinha. The agronomic perfomance of these genotypes was evaluated by reviewing these characteristics: initial flowering,plant height, stem diameter, leaf number, circumference of the chapter, final stand, and yield. The data

  10. Propagação vegetativa de genótipos de pitangueira (Eugenia uniflora L. do Sul do Brasil por enxertia de garfagem Vegetative propagation of surinam cherry (Eugenia uniflora L. genotypes from Southern Brazil, through cleft graft

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    Rodrigo Cezar Franzon

    2010-03-01

    Full Text Available Este trabalho teve como objetivo avaliar o uso da enxertia de garfagem em fenda cheia na propagação vegetativa de diferentes genótipos de pitangueira. Foram utilizados sete genótipos do Banco Ativo de Germoplasma de fruteiras nativas do Sul do Brasil, mantidos na Embrapa Clima Temperado, em Pelotas-RS, dos quais foram coletados garfos (estacas semilenhosas, com aproximadamente 5 cm de comprimento. Utilizou-se como porta-enxertos de plantas de pitangueira oriundas de sementes. O diâmetro médio no ponto de enxertia foi de 2,5 mm. A enxertia foi realizada em setembro de 2006. O delineamento experimental foi o inteiramente casualizado, com quatro repetições, sendo a unidade experimental constituída por 10 plantas. Foram avaliadas as percentagens de brotação e de pegamento dos enxertos. Os percentuais de estacas brotadas variaram entre 45,0% e 95,0%, enquanto o pegamento dos enxertos variou entre 40,0% e 87,5%. Percentuais acima de 65,0% foram obtidos para as seleções "Pit 75", "Pit 61" e "Pit 137", para ambos os parâmetros avaliados, brotação e pegamento dos enxertos. Existe diferença entre genótipos desta espécie quanto à capacidade de pegamento na enxertia por garfagem no topo em fenda cheia. Este tipo de enxertia é apropriado para a propagação vegetativa da pitangueira.This work had the objective of testing cleft grafting as a way to asexually propagate different genotypes of Surinam cherry. Bud wood of around 5 cm length were collected from seven genotypes of the Germplasm Bank of Embrapa Clima Temperado, Pelotas, RS. Seedling plants of Surinam cherry seedlings were used as rootstocks. The average diameter at the grafting point was 2.5 mm. Grafting was done on September, 2006. The experiment was carried out as a completely randomized design with four replications and 10 plants per plot. Evaluations were based on percentage of obtained plants in relation to the total number of grafts and percentage of grafts with leaf burst

  11. ACTN3 genotype in professional soccer players

    OpenAIRE

    Santiago Dorrego, Catalina; González-Freire, Marta; Serratosa Fernández, Luis; Morate, F. J.; Meyer, T.; Gómez Gallego, Félix; Lucía Mulas, Alejandro

    2008-01-01

    The authors studied the frequency distribution of alpha-actinin-3 (ACTN3) R577X genotypes in 60 top-level professional soccer players. The results were compared with those of 52 elite endurance athletes and 123 sedentary controls. The per cent distribution of RR and RX genotypes in soccer players (48.3% and 36.7%) was significantly higher and lower, respectively, than controls (28.5% and 53.7%) and endurance athletes (26.5% and 52%) (p = 0.041). Although there are notable exceptions, elite so...

  12. [Seasonal distribution of gill parasites in fishes from fee-fishing at Guariba, São Paulo State, Brazil].

    Science.gov (United States)

    Schalch, Sergio H C; Moraes, Flávio R de

    2005-01-01

    This study was accomplished with the objective of knowing the seasonal distribution of the main species of parasites causes of branchial damages to the fish from fee-fishing at Guariba, State of São Paulo. This city is situated at 21 degrees 15'22'' S, 48 degrees 18'58'' W, in altitude 595 meters. This research was conducted between April, 1997 to March, 1999. From 408 fishes examined, 29.1% of them were infested by the protozoans e metazoans. Leporinus macrocephalus showed the highest parasitism by Trichodina sp., although Piaractus mesopotamicus and Cyprinus carpio were also parasited. Piscinoodinium pillulare infestation were found in L. macrocephalus, P. mesopotamicus, C. carpio e Colossoma macropomum. Monogenetics metazoan have largely been observed in L. macrocephalus, P. mesopotamicus, C. carpio, C. macropomum e cross-bred tambacu. The incidence of this parasite was elevated in the summer for L. macrocephalus, spring for P. mesopotamicus and C. macropomum, and both seasons for cross-bred tambacu. Lernaea cyprinacea copepodes were observed in L. macrocephalus, P. mesopotamicus, C. carpio and cross- breeding tambacu, in spite of the fact that C. carpio has demonstrated high parasitism of adult form. The fish L. macrocephalus, P. mesopotamicus and C. carpio were sponged intensely by Dolops carvalhoi, in situation of high population density. Piaractus mesopotamicus was considered the species more parasited by myxosporídeos, that were also observed in L. macrocephalus and cross-breeding tambacu. PMID:16445870

  13. Distribution and growth in adults of Macrobrachium acanthurus Wiegmann, (Decapoda, Palaemonidae in a tropical coastal lagoon, Brazil

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    Edélti Faria Albertoni

    2002-12-01

    Full Text Available Macrobrachium acanthurus Wiegmann, 1836 is a Palaemonidae commonly found in Brazilian coastal environments. At Imboassica lagoon, located in the north of the State of Rio de Janeiro, it is found in two stages of its life cycle: as larvae and as reproductive adults. This work had as its goal the evaluation of adults distribution, estimating the weight/length relationship and the condition factor of these adults. After sampling in two regions of the lagoon, one interior and another closer to the ocean, we verified that females are found in a greater proportion close to the ocean, and males are found in greater number in the innermost region, amidst the aquatic macrophytes, suggesting that the fecundation takes place in this last area and the females then travel to the area closer to the ocean to spawn. Total and carapace weight/length relationship exhibited differences between males and females, presenting positive allometric growth. The relative growth of the cephalotorax related to total length showed that it correspond to 53% of the total length in females, and 50% in males. The average condition factor was significantly lower than the expected pattern, demonstrating that the species does not find ideal conditions in the lagoon. This may be attributed to the migration of the adults, to the spawning and/or to the impact caused by the frequent sandbar openings that took place at Imboassica lagoon during the studied period.

  14. Geographical distribution of American cutaneous leishmaniasis and its phlebotomine vectors (Diptera: Psychodidae in the state of São Paulo, Brazil

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    Baton Luke

    2010-12-01

    Full Text Available Abstract Background American cutaneous leishmaniasis (ACL is a re-emerging disease in the state of São Paulo, Brazil. It is important to understand both the vector and disease distribution to help design control strategies. As an initial step in applying geographic information systems (GIS and remote sensing (RS tools to map disease-risk, the objectives of the present work were to: (i produce a single database of species distributions of the sand fly vectors in the state of São Paulo, (ii create combined distributional maps of both the incidence of ACL and its sand fly vectors, and (iii thereby provide individual municipalities with a source of reference material for work carried out in their area. Results A database containing 910 individual records of sand fly occurrence in the state of São Paulo, from 37 different sources, was compiled. These records date from between 1943 to 2009, and describe the presence of at least one of the six incriminated or suspected sand fly vector species in 183/645 (28.4% municipalities. For the remaining 462 (71.6% municipalities, we were unable to locate records of any of the six incriminated or suspected sand fly vector species (Nyssomyia intermedia, N. neivai, N. whitmani, Pintomyia fischeri, P. pessoai and Migonemyia migonei. The distribution of each of the six incriminated or suspected vector species of ACL in the state of São Paulo were individually mapped and overlaid on the incidence of ACL for the period 1993 to 1995 and 1998 to 2007. Overall, the maps reveal that the six sand fly vector species analyzed have unique and heterogeneous, although often overlapping, distributions. Several sand fly species - Nyssomyia intermedia and N. neivai - are highly localized, while the other sand fly species - N. whitmani, M. migonei, P. fischeri and P. pessoai - are much more broadly distributed. ACL has been reported in 160/183 (87.4% of the municipalities with records for at least one of the six incriminated or

  15. The distribution and occurrence of the marine manatee (Trichechus manatus) in the estuary of the Mamanguape River, Paraíba, Brazil

    OpenAIRE

    Kleber Grubel da Silva; Danielle Paludo; Eunice Maria Almeida de Oliveira; Régis Pinto de Lima; Ricardo José Soavinski

    2011-01-01

    Although the existing historical records of marine manatees in the Brazilian coast since the 17th century, few studies about this species were conducted in Brazil. Among them, the estuary of the Mamanguape River is told to be the main place of this species concentration in the northeastern coast of Brazil, but this one is suffering oppression due to the improvement of human activities which can compromise the ecosystem as a whole. In this way, this work viewed to obtain information about the ...

  16. Dengue virus type 3 in Brazil: a phylogenetic perspective

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    Josélio Maria Galvão de Araújo

    2009-05-01

    Full Text Available Circulation of a new dengue virus (DENV-3 genotype was recently described in Brazil and Colombia, but the precise classification of this genotype has been controversial. Here we perform phylogenetic and nucleotide-distance analyses of the envelope gene, which support the subdivision of DENV-3 strains into five distinct genotypes (GI to GV and confirm the classification of the new South American genotype as GV. The extremely low genetic distances between Brazilian GV strains and the prototype Philippines/L11423 GV strain isolated in 1956 raise important questions regarding the origin of GV in South America.

  17. Vertical distribution of zooplankton in the water column of Lago Amapá, Rio Branco, Acre, Brazil

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    Erlei Cassiano Keppeler

    2004-06-01

    Full Text Available The aim of investigation was to study the model of vertical distribution in Lago Amapá, taking into consideration the seasonality of its zooplanktonic composition. Lago Amapá (10º2'36"S and 67º50'24"W is located in the floodplain of the Rio Acre. Samplings were conducted at three different depths of the water column, to study the vertical distribution of zooplankton populations and determine some physico-chemical and biological parameters of Lago Amapá. Weekly samples were taken with a Van Dorn sampler. The species showed greater concentrations at the by means of water column. Thirty-eight zooplankton species were found in the samples represented by Rotifera (30, Cladocera (5 and Cyclopoida (3. The temperature of the water column showed a tendency toward relatively high values (about 30ºC with little variation, consequently resulting in low viscosity. Based of Jaccard's index, it was seen that during the low-water phase, S1 and S3 of the three sampling stations studied, had greater similarity (Cj = 0.7058 in the middle of the water column. Lago Amapá showed characteristics in line with the intermediate disturbance hypothesis model, favoring colonization by opportunistic species such as rotifers.O objetivo desta investigação foi observar a distribuição vertical da comunidade do zooplâncton no Lago Amapá (10º2'36"S e 67º50'24"W, localizado na planície de inundação do Rio Acre. Amostragens foram conduzidas em três diferentes profundidades da coluna da água, considerando aspectos sazonais do zooplâncton, parâmetros físicos, químicos e biológicos. Coletas foram realizadas semanalmente com Garrafa de Van Dorn. As espécies apresentaram maiores concentrações no meio da coluna da água. Foram encontradas 38 espécies, assim distribuídas: Rotifera (30, Cladocera (5 e Cyclopoida (3. A temperatura da coluna da água em geral apresentou-se alta, em torno de 30ºC, com pequena variação, resultando em baixa viscosidade. O

  18. Spatial distribution of the risk of dengue and the entomological indicators in Sumare, state of Sao Paulo, Brazil.

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    Gerson Laurindo Barbosa

    2014-05-01

    Full Text Available Dengue fever is a major public health problem worldwide, caused by any of four virus (DENV-1, DENV-2, DENV-3 and DENV-4; Flaviviridae: Flavivirus, transmitted by Aedes aegypti mosquito. Reducing the levels of infestation by A. aegypti is one of the few current strategies to control dengue fever. Entomological indicators are used by dengue national control program to measure the infestation of A. aegypti, but little is known about predictive power of these indicators to measure dengue risk. In this spatial case-control study, we analyzed the spatial distribution of the risk of dengue and the influence of entomological indicators of A. aegypti in its egg, larva-pupa and adult stages occurring in a mid-size city in the state of São Paulo. The dengue cases were those confirmed by the city's epidemiological surveillance system and the controls were obtained through random selection of points within the perimeter of the inhabited area. The values of the entomological indicators were extrapolated for the entire study area through the geostatistical ordinary kriging technique. For each case and control, the respective indicator values were obtained, according with its geographical coordinates and analyzed by using a generalized additive model. Dengue incidence demonstrated a seasonal behavior, as well as the entomological indicators of all mosquito's evolutionary stages. The infestation did not present a significant variation in intensity and was not a limiting or determining factor of the occurrence of cases in the municipality. The risk maps of the disease from crude and adjusted generalized additive models did not present differences, suggesting that areas with the highest values of entomological indicators were not associated with the incidence of dengue. The inclusion of other variables in the generalized additive models may reveal the modulatory effect for the risk of the disease, which is not found in this study.

  19. Paracoccidioidomycosis in children in the state of Rio de Janeiro (Brazil: Geographic distribution and the study of a "reservarea"

    Directory of Open Access Journals (Sweden)

    A. J. RIOS GONÇALVES

    1998-01-01

    Full Text Available Thirty six cases of acute disseminated paracoccidioidomycosis in 3 to 12 year-old children, natives of the state of Rio de Janeiro, were seen in the period 1981-1996. All patients were residents in the rural region of 15 counties, scattered on the Southwestern part of this state. The rural region of two neighboring counties, where 16 cases (44.4% occurred, was visited. It exhibited the environmental conditions that are considered favorable to the survival of P. brasiliensis. The most important of these conditions, abundant watercourses and autochthonous forest, are distributed on well defined and limited areas, in which the dwellings are also localized. Probably, a careful epidemiological study of forthcoming cases of the disease in children may facilitate the search for the micro-niche of the fungus.No período 1981-1996 foram observados 36 casos de paracoccidioidomicose aguda disseminada em crianças, entre 3 e 12 anos de idade, nativas do estado do Rio de Janeiro. Todos os pacientes residiam em região rural, distribuída por 15 municípios localizados na parte sudoeste do estado. Dois municípios vizinhos, onde haviam ocorrido 16 (44,4% dos casos, foram visitados. Na região rural de ambos, existem as condições climáticas e ambientais favoráveis à sobrevivência do P. brasiliensis. Dentre essas condições, as mais importantes, abundantes cursos de água e vegetação nativa, distribuem-se em áreas limitadas e bem definidas. Nessas áreas localizam-se, também, as casas dos rurículas. Provavelmente, um cuidadoso estudo epidemiológico de novos casos, que venham a ocorrer na região, facilitará a busca do nicho do fungo

  20. Modelos da distribuição temporal de chuvas intensas em Piracicaba, SP Time distribution models of intense rainfall in Piracicaba, SP, Brazil

    Directory of Open Access Journals (Sweden)

    Décio E. Cruciani

    2002-04-01

    Full Text Available O estudo da variação temporal de chuvas intensas é de grande importância na hidrologia, para a análise e previsão de eventos extremos, necessárias em projetos de controle de engenharia. Com esse objetivo, foram analisados dados de pluviogramas da cidade de Piracicaba, SP, do período de 1966 a 2000, para se determinar a distribuição temporal de chuvas intensas de 60 e de 120 min de duração. As chuvas de 60 min foram subdivididas em três intervalos iguais e sucessivos de 20 min cada um, enquanto as chuvas de 120 min foram subdivididas em quatro intervalos iguais e sucessivos de 30 min cada um. O modelo de distribuição da precipitação que predominou para as chuvas de 60 e 120 min, foi do tipo exponencial negativo, com 85,7 e 50,7% dos casos, respectivamente. Para as chuvas de 60 min, com altura pluviométrica média de 20,7 mm, a distribuição foi de 72,3, 21,4 e 6,2% do total precipitado, respectivamente, nos três intervalos sucessivos de 20 min. Para as chuvas de 120 min, com altura pluviométrica média de 33,3 mm, o resultado foi de 60,1, 25,2, 11,1 e 3,6%, respectivamente, nos quatro intervalos sucessivos de 30 min. O modelo de distribuição temporal dessas chuvas não foi modificado pelo total precipitado nem pela sua duração, nos intervalos em questão.Time distribution models of intense and short rains are very important in hydrology and for extreme predictions in engineering projects. With this purpose, rain data of Piracicaba, SP, Brazil, from 1966 to 2000 were analyzed to establish time distribution models of 60 and 120 min intense rains, during the rainy season from October through March. Time distribution models were assessed by three intervals of twenty minutes duration, for 60 min rains and by four intervals of thirty minutes duration for 120 min rains. The prevailing precipitation model for both, 60 and 120 min rains was a negative exponential distribution, in 85.7 and 50.7% of cases, respectively. For 60 min

  1. The HBV E Genotype Discover in Dai Nationality in Xishuangbanna, Yunnan Province

    Institute of Scientific and Technical Information of China (English)

    Hai-ping ZHAO; Yuan-ying SHEN; Ru SHEN; Yuan-yi WANG; Mei-ya FU

    2009-01-01

    To investigate the distribution of Hepatitis B virus (HBV) genotypes among the population of Dai nationality in Xishuangbanna, Yurman Province HBV genotypes of the Serum samples were tested by PCR-RFLP. This is the first time to discover the B+E genotypes in China. This finding provides new information for understanding the distribution of HBV genotype in China and a provides a basis for establishing a Chinese gene bank.

  2. Calibration and parameterization of a semi-distributed hydrological model to support sub-daily ensemble flood forecasting; a watershed in southeast Brazil

    Science.gov (United States)

    de Almeida Bressiani, D.; Srinivasan, R.; Mendiondo, E. M.

    2013-12-01

    The use of distributed or semi-distributed models to represent the processes and dynamics of a watershed in the last few years has increased. These models are important tools to predict and forecast the hydrological responses of the watersheds, and they can subside disaster risk management and planning. However they usually have a lot of parameters, of which, due to the spatial and temporal variability of the processes, are not known, specially in developing countries; therefore a robust and sensible calibration is very important. This study conduced a sub-daily calibration and parameterization of the Soil & Water Assessment Tool (SWAT) for a 12,600 km2 watershed in southeast Brazil, and uses ensemble forecasts to evaluate if the model can be used as a tool for flood forecasting. The Piracicaba Watershed, in São Paulo State, is mainly rural, but has about 4 million of population in highly relevant urban areas, and three cities in the list of critical cities of the National Center for Natural Disasters Monitoring and Alerts. For calibration: the watershed was divided in areas with similar hydrological characteristics, for each of these areas one gauge station was chosen for calibration; this procedure was performed to evaluate the effectiveness of calibrating in fewer places, since areas with the same group of groundwater, soil, land use and slope characteristics should have similar parameters; making calibration a less time-consuming task. The sensibility analysis and calibration were performed on the software SWAT-CUP with the optimization algorithm: Sequential Uncertainly Fitting Version 2 (SUFI-2), which uses Latin hypercube sampling scheme in an iterative process. The performance of the models to evaluate the calibration and validation was done with: Nash-Sutcliffe efficiency coefficient (NSE), determination coefficient (r2), root mean square error (RMSE), and percent bias (PBIAS), with monthly average values of NSE around 0.70, r2 of 0.9, normalized RMSE of 0

  3. 国内南方人群遗传性共济失调不同基因亚型的分布状况%Distribution of different genotypes of hereditary ataxia in south China

    Institute of Scientific and Technical Information of China (English)

    谢秋幼; 梁秀龄; 李洵桦

    2006-01-01

    BACKGROUND: It is of great importance to study the genotype distribution of hereditary ataxia in understanding its epidemiologic rule and pathogenetic pathway.OBJECTIVE: To analyze the distribution of different genotype of hereditary ataxia in south China.DESIGN: A case-control observation.SETTING: Department of Neurology, the First Affiliated Hospital of Sun Yat-sen University.PARTICIPANTS: Forty-three patients (26 males and 17 females) with hereditary ataxia from 36 families and 38 patients with sporadic hereditary ataxia (24 males and 14 females) were selected from the Outpatient Clinic of Neurogenetics, Department of Neurology, the First Affiliated Hospital of Sun Yat-sen University between September 1998 and September 2002. At the same time, 60 healthy individuals from the patients' families and 44randomly-selected healthy physical examinees were taken as controls. All the participants were enrolled voluntarily.METHODS: The fragments of trinucleotide repeats at different sites of mutant genes were amplified with polymerase chain reaction (PCR), and then the lengths were calculated with polyacrylamide gel electrophoresis and imaging analytical software. The repeated numbers of trinucleotide repeats in all the normal and abnormal amplified alleles were calculated respectively.MAIN OUTCOME MEASURES: Different genotype distribution in patients with hereditary ataxia.RESULTS: All the subjects were involved in the analysis of results. Of the detected patients with hereditary ataxia, the Machado-Joseph disease/spinocerebellar ataxia (SCA) 3 was the most common type of autosomal dominant SCA in South China, which was 42.0%, and was followed by SCA2 (7.4%), SCA1 (4.9%), SCA7 (3.7%), SCA6 (2.5%), SCA12 (1.2%).No patient was detected to have SCA8 SCA 10, SCA 17 dentatorubropallidoluysian atrophy (DRPLA) and Friedreich ataxia (FRDA).CONCLUSION: Autosomal dominant SCA3 is the most familiar genotype in South China. Clinical detection of hereditary ataxia should be done

  4. Distribution and abundance of the Lesser electric ray Narcine brasiliensis (Olfers, 1831 (Elasmobranchii: Narcinidae in southern Brazil in relation to environmental factors

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    Gabriel Maciel de Souza Vianna

    2009-06-01

    Full Text Available The distribution and abundance of the lesser electric ray, Narcine brasiliensis, was assessed based on bottom-trawl survey data collected off the coast of Rio Grande do Sul, southern Brazil. Between 1980 and 1984 and in 2005, 416 bottom trawl hauls were carried out at depths of 10-100 m. Narcine brasiliensis occurred mainly in waters with bottom temperature between 20 and 25ºC. Density of the species was higher between the depths of 10 and 20 m, during the summer and autumn. The seasonal pattern of N. brasiliensis in the shallow coastal water of Rio Grande do Sul reflects a southward migration in summer. This is conditioned by the southward advance of warmer and high-salinity Tropical Water of the Brazil Current In winter, the return or northward migration is a response to seasonal cooling of the coastal waters and to the northward advance of cold Coastal Water of lower salinity. The latitudinal gradient in density of N. brasiliensis was related to the latitudinal gradient in salinity of the bottom waters. This was caused by the freshwater runoff from the Patos Lagoon establishing a physical barrier to the occurrence of the species farther south than the city of Rio Grande.A distribuição e abundância da raia elétrica Narcine brasiliensis foi analisada com base em 416 lances de arrasto de fundo realizados entre as profundidades de 10- 100 m ao longo da costa do Rio Grande do Sul, em 1980-1984 e 2005. A espécie ocorreu prioritariamente em águas com temperatura de fundo entre 20 e 25ºC. A densidade de N. brasiliensis foi maior durante o verão e outono e entre as profundidades de 10 e 20 m. O padrão sazonal de densidade da espécie nas águas costeiras rasas do Rio Grande do Sul reflete uma migração no sentido norte-sul condicionada pelo avanço das águas quentes e de alta salinidade da Água Tropical da Corrente do Brasil em direção ao sul durante o verão. A redução sazonal da temperatura da água e o avanço da Água Costeira, de

  5. Molecular epidemiology and distribution of serotypes, genotypes, and antibiotic resistance genes of Streptococcus agalactiae clinical isolates from Guelma, Algeria and Marseille, France.

    Science.gov (United States)

    Bergal, A; Loucif, L; Benouareth, D E; Bentorki, A A; Abat, C; Rolain, J-M

    2015-12-01

    This study describes, for the first time, the genetic and phenotypic diversity among 93 Streptococcus agalactiae (group B Streptococcus, GBS) isolates collected from Guelma, Algeria and Marseille, France. All strains were identified by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF MS). The molecular support of antibiotic resistance and serotyping were investigated by polymerase chain reaction (PCR). The phylogenetic lineage of each GBS isolate was determined by multilocus sequence typing (MLST) and grouped into clonal complexes (CCs) using eBURST. The isolates represented 37 sequence types (STs), 16 of which were novel, grouped into five CCs, and belonging to seven serotypes. Serotype V was the most prevalent serotype in our collection (44.1%). GBS isolates of each serotype were distributed among multiple CCs, including cps III/CC19, cps V/CC1, cps Ia/CC23, cps II/CC10, and cps III/CC17. All isolates presented susceptibility to penicillin, whereas resistance to erythromycin was detected in 40% and tetracycline in 82.2% of isolates. Of the 37 erythromycin-resistant isolates, 75.7% showed the macrolide-lincosamide-streptogramin B (MLSB)-resistant phenotype and 24.3% exhibited the macrolide (M)-resistant phenotype. Constitutive MLSB resistance (46%) mediated by the ermB gene was significantly associated with the Guelma isolates, whereas the M resistance phenotype (24.3%) mediated by the mefA/E gene dominated among the Marseille isolates and belonged to ST-23. Tetracycline resistance was predominantly due to tetM, which was detected alone (95.1%) or associated with tetO (3.7%). These results provide epidemiological data in these regions that establish a basis for monitoring increased resistance to erythromycin and also provide insight into correlations among clones, serotypes, and resistance genes. PMID:26415872

  6. Significance Thresholds for Quantitative Trait Locus Mapping Under Selective Genotyping

    OpenAIRE

    Manichaikul, Ani; Palmer, Abraham A.; Sen, Śaunak; Broman, Karl W.

    2007-01-01

    In the case of selective genotyping, the usual permutation test to establish statistical significance for quantitative trait locus (QTL) mapping can give inappropriate significance thresholds, especially when the phenotype distribution is skewed. A stratified permutation test should be used, with phenotypes shuffled separately within the genotyped and ungenotyped individuals.

  7. Brazil: anchoring the region

    International Nuclear Information System (INIS)

    The role of Brazil's state-run petroleum company, Petrobras, in providing a national supply of oil and natural gas and their products to Brazil was discussed. Petrobras is the sole state-run enterprise which carries out research, exploration, production, refining, imports, exports and the transportation of oil and gas in Brazil. Petrobras has built a complete and modern infrastructure made up of refineries, distribution bases, terminals and oil and gas pipelines. Recently (1995) the Brazilian National Assembly approved legislation that while confirming the state monopoly, also provides private contractors and other state-owned companies ways to participate in the petroleum sector. There exists a great potential for oil and gas in many of Brazil's 29 sedimentary basins. The regulatory legislation also created two new organs to deal with the partial deregulation of the petroleum sector, the National Board for Energy Policy and the National Petroleum Agency. The first of these will deal with policy issues, measures and guidelines regarding regional energy supply and demand and specific programs such as those affecting natural gas, fuel alcohol, coal and nuclear energy. The National Petroleum Agency will manage the hydrocarbon sector on behalf of the government. Its functions will include regulation and monitoring of the sector, managing the bidding process for concessions for exploration and production, and other related activities. The new legislation opens up new horizons for the Brazilian oil sector, providing opportunities for private investment, both domestic and foreign, as well as for new technological capabilities associated with these investments. 1 tab., 6 figs

  8. Genotipagem de polimorfismos associados com sistemas de macho-esterilidade em acessos de cebola adaptados ao Brasil Genotyping of polymorphisms associated with male-sterility systems in onion accessions adapted for cultivation in Brazil

    Directory of Open Access Journals (Sweden)

    Carlos Francisco Ragassi

    2012-09-01

    lines for the Brazilian onion hybrid breeding programs. In the present work, polymerase chain reaction (PCR assays were conducted using mitochondria-derived markers in order to characterize the cytoplasm type present in different morpho-agronomic onion types cultivated in Brazil. The S cytoplasm appeared to be the most frequent one among the 66 evaluated accessions with a frequency of 56%. The T male-sterility-inducing cytoplasm was observed in 25.8% of the accessions. Of the samples, 18.2% displayed exclusively the cytoplasm N. This information could be useful to guide the onion breeding programs in the selection of parental lines aiming to develop hybrid cultivars adapted to tropical and subtropical areas of the world.

  9. Trigo duro: comportamento de genótipos no estado de São Paulo Durum wheat: evaluation of genotypes for the state of São Paulo, Brazil

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    Carlos Eduardo de Oliveira Camargo

    1995-01-01

    medium stature. These lines presented good grain yield in soils with low acidity. However, they did not differ in yield from the wheat cultivar IAC-60, the most cultivated actually in the State of São Paulo and from the triticale Álamos. The durum wheat line 19 (Mindum/Kingfisher "S"//Sandpiper showed at the same time immunity to the causal agents of stem (with exception of line 21 and leaf rusts and moderate resistance to the causal agent of powdery mildew. The cultivars Álamos (triticale and IAC-29 (wheat exhibited immunity to the causal agents of powdery mildew. All considered genotypes were susceptible to the leaf spots patogens, with exception of the durum wheat line 6 (Dackiye/Gerardo Vezio 394 which was moderately resistant.

  10. Measurements of experimental precision for trials with cowpea (Vigna unguiculata L. Walp.) genotypes.

    Science.gov (United States)

    Teodoro, P E; Torres, F E; Santos, A D; Corrêa, A M; Nascimento, M; Barroso, L M A; Ceccon, G

    2016-01-01

    The aim of this study was to evaluate the suitability of statistics as experimental precision degree measures for trials with cowpea (Vigna unguiculata L. Walp.) genotypes. Cowpea genotype yields were evaluated in 29 trials conducted in Brazil between 2005 and 2012. The genotypes were evaluated with a randomized block design with four replications. Ten statistics that were estimated for each trial were compared using descriptive statistics, Pearson correlations, and path analysis. According to the class limits established, selective accuracy and F-test values for genotype, heritability, and the coefficient of determination adequately estimated the degree of experimental precision. Using these statistics, 86.21% of the trials had adequate experimental precision. Selective accuracy and the F-test values for genotype, heritability, and the coefficient of determination were directly related to each other, and were more suitable than the coefficient of variation and the least significant difference (by the Tukey test) to evaluate experimental precision in trials with cowpea genotypes. PMID:27173351

  11. 大连地区不同年龄段女性人乳头瘤病毒感染及基因亚型分布调查%Research on HPV infection and its genotypes distribution in female at different ages in Dalian area

    Institute of Scientific and Technical Information of China (English)

    杨真; 侯剑; 李小欢; 袁小林

    2013-01-01

    OBJECTIVE To explore the prevalence of human papillomavirus (HPV) infection and its genotypes distribution in female at different ages in Dalian area and to provide theoretical basis for screening and preventing cervical cancer.METHODS The infectious status of HPV in 1341 females in Dalian area was examined with gene chip technique and various genotypes of HPV were compared and analyzed.The positive rate,multiple infection,gene type and genotypes distribution were calculated respectively at different ages.RESULTS 280 of 1 341 cases were positive for HPV (20.88%).Single,double,triplex and quadruplex genotypes of HPV accounted for 77.50% (217/280),14.64% (41/280),6.07% (17/280) and 1.79% (5/280),respectively.Low-risk genotypes,high-risk genotypes and low-risk combined with high-risk genotypes accounted for 20.00% (56/280),70.00% (196/280) and 10.00% (28/280),respectively.Twenty genotypes were detected,including low-risk genotypes (HPV-6,11,42,43) and high-risk genotypes (HPV-16,18,31,33,35,45,51,52,53,56,58,59,66,68,73,83),and the predominant genotypes were HPV43 and HPV16 respectively in low-risk and high-risk genotypes.CONCLUSION The determination of HPV genotypes was important for early discovery,diagnosis and treatment of cervical cancer.%目的 探讨大连地区不同年龄段女性人乳头瘤病毒(HPV)的感染及基因亚型分布情况,为宫颈癌的筛查及防治提供理论依据.方法 采用PCR体外扩增和DNA反向点杂交相结合的DNA芯片技术,对大连地区1 341例成年女性HPV的感染情况进行定性检测并加以分型,按不同年龄分组,分别统计HPV感染阳性率、多重感染、基因型别及亚型分布情况.结果 1341例女性标本中,共检出HPV阳性标本280例,阳性率为20.88%;单一感染217例(占77.50%),双重感染41例(占14.64%),三重感染17例(占6.07%),四重感染5例(占1.79%);单纯低危型感染56例(占20.00%),单纯高危型感染196例(占70.00%),低

  12. A novel hepatitis B virus genotyping system by using restriction fragment length polymorphism patterns of S gene amplicons

    Institute of Scientific and Technical Information of China (English)

    Guo-Bing Zeng; Shu-Juan Wen; Zhan-Hui Wang; Li Yan; Jian Sun; Jin-Lin Hou

    2004-01-01

    AIM: Traditional hepatitis B virus (HBV) genotyping methods using restriction fragment length polymorphism (RFLP) can reliably identify genotypes A to F. As HBV genotypes G and H have been recently identified, this study was to establish an accurate and simple genotyping method for all eight HBV genotypes (A to H).METHODS: Two hundred and forty HBV small S sequences obtained from GeneBank were analysed for restriction enzyme sites that would be genotype-specific. Restriction patterns following digestion with restriction enzymes BsrⅠ,StyⅠ, DpnⅠ, HpaⅡ, and EaeⅠ, were determined to identify all eight HBV genotypes. Mixed genotype infections were confirmed by cloning and further RFLP analysis.RESULTS: The new genotyping method could identify HBV genotypes A to H. Genotypes B and C could be determined by a single step digestion with BsrⅠ and StyⅠ in parallel. This was particularly useful in the Far East where genotypes B and C are predominant. Serum samples from 187 Chinese HBV carriers were analysed with this genotyping system, and the genotype distribution was 1.1% (2), 51.9% (97), 40.6% (76) and 4.8%(9) for genotypes A, B, C, and D, respectively. Mixed genotypes were found in only 3 patients (1.6%). Sequence data analysis confirmed the validity of this new method.CONCLUSION: This HBV genotyping system can identify all eight HBV genotypes. It is accurate and simple, and can be widely used for studies on HBV genotyping.

  13. Topologia do risco de acidentes do trabalho em Piracicaba, SP Spatial distribution of risks for work-related injuries in a city of Southeastern e Brazil

    Directory of Open Access Journals (Sweden)

    Lia Thieme Oikawa Zangirolani

    2008-04-01

    Full Text Available OBJETIVO: Analisar a distribuição espacial do risco de acidente do trabalho controlado por variáveis nutricionais e outras co-variáveis. MÉTODOS: Estudo caso-controle espacial de base hospitalar, tendo como variável de interesse a localização espacial dos acidentes do trabalho. Foram amostrados 794 trabalhadores, no período de maio a outubro de 2004. Os critérios de inclusão para casos (N=263 foram: ser trabalhador acidentado do trabalho, morador de Piracicaba, com idade entre 15 e 60 anos, e atendido em centro de ortopedia e traumatologia. Os controles (N=531 tiveram o mesmo critério de idade e residência na cidade, exceto que o acidente não era do trabalho, tendo sido considerandos também trabalhadores acompanhantes dos casos. A distribuição espacial da estimativa baseou-se no ajuste do modelo aditivo generalizado, tendo as coordenadas geográficas dos casos e controles como componente espacial não linear e as demais co-variáveis como componente linear. RESULTADOS: A variação da estimativa do risco espacial de acidentes do trabalho, controlada por sexo (OR=1,87; pOBJECTIVE: To assess spatial distribution of risks for work-related injuries controlled for nutritional variables and other covariables. METHODS: Hospital-based spatial case-control study with work-related injuries spatial distribution as the main variable of interest. A total of 794 workers were selected between May and October 2004. Inclusion criteria for cases (N=263 were: worker with work-related injury; living in Piracicaba (Southeastern Brazil; age between 15 and 60 years old; and cared at an orthopedics and trauma center. Controls (N=531 met the same criteria for age and residence, but had non-work-related injuries and workers accompanying cases were included as well. Spatial distribution was estimated by adjusting a generalized additive model with geographical coordinates of cases and controls as spatial non-linear component and the remaining covariables

  14. Avaliação agronômica de genótipos de bananeiras em condições subtropicais, Vale do Ribeira, São Paulo - Brasil Agronomic evaluation of banana plants genotypes in subtropical conditions, Vale do Ribeira, São Paulo - Brazil

    Directory of Open Access Journals (Sweden)

    Edson Shigueaki Nomura

    2013-03-01

    diseases, appropriate size and resistance to drought and cold, there are few cultivars with agronomic potential to be used commercially. Aiming to evaluate the vegetative development of banana genotypes at Vale do Ribeira (Brazil conditions the following materials were tested, separated into two genomic groups: AAAA (Bucaneiro, FHIA 02 and FHIA 17, and AAAB, subdivided according to the cultivar used in the breeding: Prata (BRS Garantida, FHIA 18, BRS FHIA Maravilha, BRS Platina and PA94-01; Pacovan (BRS Japira, BRS Pacovan Ken, PV79-34, PV94-01 and BRS Vitória; and Yangambi n.2 (BRS Tropical, BRS Princesa and YB42-03. The cultivars Grande Naine (AAA, Pacovan (AAB, Prata anã (AAB and Yangambi (AAA present development, production and sensory characteristics similar to the evaluated genotypes, so they were used to compare to standards. During two cycles it was evaluated: height, pseudo stem diameter, number of active leaves (on blooming and in the harvest, the interval between planting and blooming and the interval between planting and harvest (days. It was calculated confidence intervals in different groups and types of bananas. According to the obtained data it can be concluded that genotypes from AAAB group with 'Paconvan' genitor cultivar are not suitable for cultivation in the region due to the plants height. The genotypes that have potential to be cultivated in Vale do Ribeira region are: AAAA (FHIA 02 and FHIA 17, AAAB group with 'Prata' genitor cultivar (FHIA 18, BRS Garantida and PA94-01 and with 'Yangambi n.2' genitor cultivar (BRS Tropical, BRS Princesa and Yangambi.

  15. Detecção e variabilidade de Plasmopara halstedii no Brasil e avaliação da resistência de genótipos de girassol ao míldio Detection and variability of Plasmopara halstedii in Brazil and resistance of sunflower genotypes to downy mildew

    Directory of Open Access Journals (Sweden)

    Regina Maria Villas Bôas de Campos Leite

    2007-12-01

    Full Text Available Este trabalho foi conduzido com o objetivo de identificar a raça fisiológica de Plasmopara halstedii que ocorreu em plantas de girassol coletadas no campo experimental da Embrapa Soja, Londrina, PR, em 1998, 2001 e 2002 e avaliar a reação de genótipos de girassol ao míldio. Plântulas de girassol das diferenciadoras de raças e das cultivares foram inoculadas com suspensão de zoosporângios do patógeno e foram plantadas em caixas contendo areia autoclavada. As plântulas foram mantidas em câmara climatizada, com temperatura controlada em 21ºC, por 11 dias. Em seguida, as plantas foram aspergidas intensamente com água destilada, cobertas com saco plástico e mantidas no escuro, a 18ºC. No dia seguinte, foi observada a presença de esporulação nos cotilédones. As plantas que apresentaram esporulação foram consideradas suscetíveis e as sem esporulação foram resistentes. O resultado indicou tratar-se da raça 330 (antiga raça 7 americana, nas três ocasiões. Os genótipos de girassol Embrapa 122, BRS 191 e as cultivares de girassol ornamental BRS Capri M, BRS Encanto M, BRS Oásis, BRS Paixão M, BRS Pesqueiro M, BRS Refúgio M, BRS Saudade M e BRS Saudade U e seus respectivos parentais foram suscetíveis a P. halstedii raça 330. Os genótipos AGROBEL 910, AGROBEL 920, AGROBEL 960, AGROBEL 965, C11, EXP38, M734, M742 e RUMBOSOL 91 foram resistentes à raça 330 do patógeno e podem ser indicados aos agricultores para uso em regiões de risco de ocorrência da doença.This research was carried out for identifying the physiological race of Plasmopara halstedii occurring in sunflower at the experimental field of Embrapa Soybean, Londrina, PR, Brazil, in 1998, 2001 and 2002 by evaluating the reaction of sunflower genotypes inoculated with downy mildew pathogen. Sunflower seedlings of the differentials set to identify races and of the cultivars were inoculated by immersion in zoosporangia suspension and were grown in autoclaved

  16. Angiostrongylus costaricensis: first record of its occurrence in the State of Espirito Santo, Brazil, and a review of its geographic distribution Angiostrongylus costaricensis: primeiro relato de sua ocorrência no estado do Espírito Santo, Brasil, e revisão de sua distribuição geográfica

    OpenAIRE

    Gil Patrus M. Pena; José de Souza Andrade Filho; Samuel Curvelo de Assis

    1995-01-01

    Abdominal angiostrongyliasis is a parasitic disease caused by Angiostrongylus costaricensis, a metastrongylid nematode with wide geographic distribution, occurring from the United States to Argentina. In Brazil, the disease has been reported from the States of Rio Grande do Sul, Santa Catarina, Paraná, São Paulo, Federal District of Brasilia and Minas Gerais. We report here a case of abdominal angiostrongyliasis in a 9-year-old girl, from Itatiba, State of Espirito Santo, Brazil, submitted to...

  17. Microsatellite genotyping from faeces of Lontra longicaudis from southern Brazil Genotipagem através de microsatélites extraídos de amostras fecais em Lontra longicaudis do sul do Brasil

    Directory of Open Access Journals (Sweden)

    Laura I. Weber

    2009-03-01

    Full Text Available A genetic study of the neotropical river otter Lontra longicaudis (Olfers, 1818, which has an unknown conservation status, was carried out at the Taim Ecological Station and the margins of the Vargas stream, Rio Grande do Sul, southern Brazil. Faecal samples were collected, and DNA was extracted using a silica-guanidine method. Five microsatellite loci were amplified using PCR with heterologous primers previously described for Lutra lutra (Linnaeus, 1758. Sixteen faecal samples out of 29 from Taim and 11 out of 14 from Vargas stream margins contained enough DNA for genetic analysis. A total of 49 different alleles were found at both localities, from which 18 were exclusively found in individuals from Taim and 17 were exclusives from Vargas individuals. The most common allele was the same at both locations for three loci (Lut715, Lut733, and Lut818. A high level of genetic diversity was found at both sites (NeTaim=4.1, HoTaim=0.299, HeTaim=0.681; NeVargas=4.9, HoVargas=0.355, HeVargas=0.724, being higher at the Vargas stream site. A high and significant level of heterozygote deficiency was observed at most loci according to the χ2 test. The homogeneity χ2 test (PA lontra neotropical de rio Lontra longicaudis (Olfers, 1818, cujo estado de conservação é ainda desconhecido, foi estudada geneticamente na Estação Ecológica do Taim e nas margens do arroio Vargas, RS, sul do Brasil. Amostras de fezes foram coletadas e o DNA foi extraído por um método de sílica-guanidina. Cinco locos de microsatélites foram amplificados por PCR utilizando primers heterólogos previamente descritos para Lutra lutra (Linnaeus, 1758. Dezesseis amostras de fezes de um total de 29 coletadas no Taim e onze das 14 obtidas no arroio Vargas contiveram DNA suficiente para prosseguir com a analise genética. Um total de 49 alelos foram obtidos, dos quais 18 foram exclusivos de indivíduos do Taim e 17 exclusivos dos indivíduos do arroio Vargas. Em três locos (Lut715

  18. Geographic distribution's ampliation of Chiroderma doriae Thomas (Mammalia, Chiroptera) in Brazil Ampliação da distribuição geográfica de Chiroderma doriae Thomas (Mammalia, Chiroptera) no Brasil

    OpenAIRE

    Marcelo O Bordignon

    2005-01-01

    The geographic distribution ampliation of Chiroderma doriae Thomas, 1891 is related in this note with a new record from Corumba City, in pantanal ecossistem of Mato Grosso do Sul State. This record extend the geographic range of C. doriae over 630 km westward in Brazil from literature last reccord.Nesta nota é relatada a ampliação da distribuição geográfica de Chiroderma doriae Thomas, 1891 com um registro inédito na cidade de Corumbá, na região do Pantanal do Estado de Mato Grosso do Sul. Es...

  19. Spatial distribution of the Ocypode quadrata (Crustacea: Ocypodidae) along estuarine environments in the Paranaguá Bay Complex, southern Brazil Distribuição espacial de Ocypode quadrata (Crustacea: Ocypodidae) ao longo de ambientes estuarinos no sul do Brasil

    OpenAIRE

    Leonardo C. da Rosa; Carlos A. Borzone

    2008-01-01

    This study examines the spatial distribution of the ghost crabs, Ocypode quadrata Fabricius, 1787, in thirteen estuarine sandy beaches located along two main axes of the Paranaguá Bay Estuarine Complex, southern Brazil. Burrow densities of ghost crabs were measured at three beach levels established around the high tide mark during the summer and winter of 2005. All beaches showed a steep beach face slope (2.6 to 8.3º) with sediment composition varying from well sorted fine sand to very poorly...

  20. Distribution of serotypes of Streptococcus pneumoniae isolated from invasive infections over a 16-year period in the greater São Paulo area, Brazil.

    OpenAIRE

    Brandileone, M. C.; Vieira, V S; Zanella, R C; I.M. Landgraf; Melles, C E; Taunay, A; J. C. Moraes; Austrian, R.

    1995-01-01

    Capsular types of pneumococci from normally sterile body sites of 1,622 patients in Brazil were analyzed. Of 1,477 isolates from cerebrospinal fluid, 76.1% were of types represented in the currently available pneumococcal vaccine. The importance of age, time, and place in determining the optimal formulation of pneumococcal vaccine is considered.

  1. First baseline of circulating genotypic lineages of Mycobacterium tuberculosis in patients from the brazilian borders with Argentina and Paraguay.

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    Luzia Neri C Machado

    Full Text Available BACKGROUND: At the triple border Brazil/Paraguay/Argentina there is easy mobility from one city to another for economic and tourism activities. This constant and fast population mobility is mainly to visit Iguazu Falls, in the Iguazu River, on the border of the Brazilian state of Paraná and the Argentina. As the incidence of tuberculosis is high in this setting, our study aimed to establish a first baseline of circulating genotypic lineages of Mycobacterium tuberculosis. METHODOLOGY/PRINCIPAL FINDINGS: This study included 120 patients from 10 cities in southwestern Paraná, Brazil with pulmonary symptoms, from July 2009 to July 2011. Information about sex, age, clinical features and address was collected by reviewing the national tuberculosis notification database. Of these, 96 (80% isolates were identified as M. tuberculosis and 22 (22.9% were drug resistant (20, 20.8% INH mono-resistant and 2, 2.1% multidrug-resistant. All isolates were subjected to genotyping by Spoligotyping and MIRU-VNTR typing. The distribution of the isolates analyzed by spoligotyping revealed 30 distinct patterns. The four mainly detected clades were Latin American and Mediterranean (LAM, ill-defined T, Haarlem (H and S. The MIRU-VNTR showed 85 distinct patterns. Spoligotyping combined to MIRU-VNTR allowed 90 distinct patterns. CONCLUSIONS/SIGNIFICANCE: Our study demonstrated that there is significant molecular diversity in circulating M. tuberculosis, with predominance of the LAM and T clades in cities of southwestern Paraná, Brazil, bordering Argentina and Paraguay.

  2. Differences in ovarian aging patterns between races are associated with ovarian genotypes and sub-genotypes of the FMR1 gene

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    Gleicher Norbert

    2012-09-01

    Full Text Available Abstract Background Ovarian aging patterns differ between races, and appear to affect fertility treatment outcomes. What causes these differences is, however, unknown. Variations in ovarian aging patterns have recently been associated with specific ovarian genotypes and sub-genotypes of the FMR1 gene. We, therefore, attempted to determine differences in how functional ovarian reserve (FOR changes with advancing age between races, and whether changes are associated with differences in distribution of ovarian genotypes and sub-genotypes of the FMR1 gene. Methods We determined in association with in vitro fertilization (IVF FOR in 62 young Caucasian, African and Asian oocyte donors and 536 older infertility patients of all three races, based on follicle stimulating hormone (FSH, anti-Müllerian hormone (AMH and oocyte yields, and investigated whether differences between races are associated with differences in distribution of FMR1 genotypes and sub-genotypes. Results Changes in distribution of mean FSH, AMH and oocyte yields between young donors and older infertility patients were significant (all P FMR1 genotypes and sub-genotypes in patients varied significantly between races, with Asians demonstrating fewer het-norm/low sub-genotypes than Caucasians and Africans (P = 0.012. Conclusion FOR changes in different races at different rates, and appears to parallel ovarian FMR1 genotypes and sub-genotype distributions. Differences in ovarian aging between races may, therefore, be FMR1-associated.

  3. Diphyllobothriasis, Brazil

    OpenAIRE

    Sampaio, Jorge Luiz Mello; Piana de Andrade, Victor; Lucas, Maria da Conceição; Fung, Liang; Gagliardi, Sandra Maria B.; Santos, Sandra Rosalem P.; Mendes, Caio Marcio Figueiredo; Eduardo, Maria Bernadete de Paula; Dick, Terry

    2005-01-01

    Cases of human diphyllobothriasis have been reported worldwide. Only 1 case in Brazil was diagnosed by our institution from January 1998 to December 2003. By comparison, 18 cases were diagnosed from March 2004 to January 2005. All patients who became infected ate raw fish in sushi or sashimi.

  4. Effect of abiotic variables on fish eggs and larvae distribution in headwaters of Cuiabá River, Mato Grosso State, Brazil

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    Simoni Ramalho Ziober

    2012-01-01

    Full Text Available Researches on ichthyoplankton seems to be an important tool to identification of spawning areas and periods for freshwater fish. Ichthyoplankton was sampled monthly in the headwaters of the Cuiabá River, upper Paraguay River basin, (Mato Grosso State, Brazil, and in four of its tributaries, between November 2007 and March 2008, to evaluate the spatial and temporal distribution of fish eggs and larvae and the influence of regional and local variables on their distribution. In total, 22,067 eggs and 1,045 larvae were collected. A significant negative correlation was found between egg density and the variables of river level and flow volume. Larval density was not significantly correlated with any of the regional variables. The egg and larval densities were significantly higher at the sampling sites in the main river. The highest densities were found in environments with greater river widths, intermediate depths and lowest values of dissolved oxygen, electrical conductivity, and transparency. Anostomidae, Zungaro zungaro, Bryconamericus spp., Pimelodus spp., Pimelodidae, Auchenipteridae, and Siluriformes were the most abundant groups of larvae, and were observed at the sampling sites in the main river. The study site is an important spawning area for migratory and, non-migratory fish species, and highlight the importance of the main river to the reproductive event, by the influence of local variables transparency and river width, which in turn maybe temporally influenced by the river level.O estudo do ictioplâncton tem se mostrado uma importante ferramenta na identificação de áreas e períodos de desova para as espécies de peixes de água doce.Amostragens de ictioplâncton foram realizadas mensalmente na região de cabeceira do rio Cuiabá, bacia do alto rio Paraguai, (Mato Grosso, Brasil e em quatro de seus tributários, entre novembro de 2007 e março de 2008, com o objetivo de avaliar a distribuição espaço-temporal de ovos e larvas de

  5. Diversidade taxonômica e padrões de distribuição geográfica em Picramnia (Simaroubaceae no Brasil Taxonomic diversity and geographic distribution patterns of Picramnia (Simaroubaceae in Brazil

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    José Rubens Pirani

    1990-07-01

    Full Text Available O gênero neotropical Picramnio Sw., tem 19 espécies no Brasil, das quais 12 são exclusivamente brasileiras. Os principais padrões de variação e distribuições geográfica e ecológica desses taxa, permitem o reconhecimento de algumas categorias de espécies: espécies monotípicas taxonómicamente isoladas, pares ou grupos de espécies muito relacionadas, espécies politípicas e complexo de espécies. Três principais padrões de distribuição geográfica das espécies brasileiras são apresentados: amplamente distribuídas; distribuição restrita; distribuição muito restrita. Com base na biogeografia, 5 "regiões" com diferentes agrupamentos de taxa foram reconhecidos: Amazonia (8 spp.; Nordeste e Brasil Central (6 spp.; região costeira da Paraíba até Alagoas (5 spp.; região Leste da Bahia até São Paulo (7 spp. e Sudeste do Brasil (4 spp.. Os maiores centros de diversidade genética do género estão na Amazónia e na Floresta Atlântica. Mapas com as distribuições conhecidas das espécies são apresentados e discutidos.In the neotropical genus Picramnia Sw., 19 species have been recognized for Brazil, from which 12 are exclusively brazilian. The main patterns of variation and geographical and ecological distribution of those taxa led to the recognizition of several categories of species: monotypic taxonomically isolated species, closely related pairs or groups of species, polytypic species and complex species. Three main patterns of geographic distribution of the brazilian species are pro posed and discussed: 1. Wide range (with 3 areas, 3 spp.; 2. Restrict range (with 4 areas, 8 sub-areas, 13 spp.; 3. Very restrict rangeBrazil (6 spp., coastal region of Paraíba (7 spp., and Southern Brazil (4 spp. The major centers of genetic diversity of the genus in Brazil are

  6. Occurrence and distribution of the exotic lizard Hemidactylus mabouia Moreau de Jonnès, 1818 in Ilha Grande, RJ, Brazil.

    Science.gov (United States)

    Rocha, C F D; Bergallo, H G

    2011-05-01

    The gekkonid lizard Hemidactylus mabouia is an exotic species in Brazil and is found in different ecosystems. This species was recorded at Ilha Grande, RJ, one of the largest insular remains of the Atlantic Rainforest in Brazil. In this study, the occurrence of H. mabouia was determined throughout the island, including the rain forest, restinga and anthropic environments. We used the active search method in points along 19 trails that surround Ilha Grande. At each regular interval of 100 m, we searched for the presence of H. mabouia. The species was recorded in a total of 100 points among the 719 sampled and, in all cases, the occurrence of the lizard corresponded to points located in anthropic or perianthropic areas. As most of Ilha Grande is covered by dense tropical rain forest, we believe this has restricted the invasion of H. mabouia in natural environments within the island. PMID:21755162

  7. Use of space and temporal distribution of Trichechus manatus manatus Linnaeus in the region of Sagi, Rio Grande do Norte State, Brazil (Sirenia, Trichechidae)

    OpenAIRE

    Danielle Paludo; Alfredo Langguth

    2002-01-01

    The marine manatee Trichechus manatus manatus Linnaeus, 1758 is endangered in the Brazilian Atlantic coast due to indiscriminate hunting practiced in the past, and to the low reproductive rate of the species. This work studies its use of space and temporal occurrence in the coastal area of Sagi, Northeastern Brazil. Daily observations from the beach of the animals in the sea were made during daytime from 1990 through 1993. The presence of reefs covered with marine algae is a determinant facto...

  8. Offshore distribution patterns of the cyanobacterium Trichodesmium erythraeum ehrenberg and associated phyto- and bacterioplankton in the southern Atlantic coast (Paraná, Brazil)

    OpenAIRE

    Adriana de Siqueira; Hedda Elisabeth Kolm; Frederico Pereira Brandini

    2006-01-01

    Studies were carried out on Thrichodesmium erythraeum occurring on the inner shelf in the state of Paraná, Brazil. Temperature, salinity, rainfall, wind velocity, total bacteria, bacterial biomass, chlorophyll-a, phytoplankton, Anabaena sp., Merismopedia sp. and T. erythraeum densities were measured in surface water. Centric and pennate diatoms, Anabaena sp. and Merismopedia sp. were most abundant at 15 m isobath, while dinoflagellate abundance was relatively constant among stations. Similarl...

  9. Origin and Evolution of Dengue Virus Type 3 in Brazil

    OpenAIRE

    Josélio Maria Galvão de Araújo; Gonzalo Bello; Hector Romero; Rita Maria Ribeiro Nogueira

    2012-01-01

    The incidence of dengue fever and dengue hemorrhagic fever in Brazil experienced a significant increase since the emergence of dengue virus type-3 (DENV-3) at the early 2000s. Despite the major public health concerns, there have been very few studies of the molecular epidemiology and time-scale of this DENV lineage in Brazil. In this study, we investigated the origin and dispersion dynamics of DENV-3 genotype III in Brazil by examining a large number (n = 107) of E gene sequences sampled betw...

  10. Comparison of methods for analysis of selective genotyping survival data

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    Dekkers Jack CM

    2006-11-01

    Full Text Available Abstract Survival traits and selective genotyping datasets are typically not normally distributed, thus common models used to identify QTL may not be statistically appropriate for their analysis. The objective of the present study was to compare models for identification of QTL associated with survival traits, in particular when combined with selective genotyping. Data were simulated to model the survival distribution of a population of chickens challenged with Marek disease virus. Cox proportional hazards (CPH, linear regression (LR, and Weibull models were compared for their appropriateness to analyze the data, ability to identify associations of marker alleles with survival, and estimation of effects when all individuals were genotyped (full genotyping and when selective genotyping was used. Little difference in power was found between the CPH and the LR model for low censoring cases for both full and selective genotyping. The simulated data were not transformed to follow a Weibull distribution and, as a result, the Weibull model generally resulted in less power than the other two models and overestimated effects. Effect estimates from LR and CPH were unbiased when all individuals were genotyped, but overestimated when selective genotyping was used. Thus, LR is preferred for analyzing survival data when the amount of censoring is low because of ease of implementation and interpretation. Including phenotypic data of non-genotyped individuals in selective genotyping analysis increased power, but resulted in LR having an inflated false positive rate, and therefore the CPH model is preferred for this scenario, although transformation of the data may also make the Weibull model appropriate for this case. The results from the research presented herein are directly applicable to interval mapping analyses.

  11. Violence in Schools in Brazil.

    Science.gov (United States)

    Pino, Angel

    1995-01-01

    The causes of violence in schools, as in society, are multiple and complex; they are rooted in the intolerable economic and social conditions created by Brazil's development model, characterized by unequal wealth distribution, widespread poverty, and an exclusive society. By mirroring this exclusionary process, the educational system is inherently…

  12. SNP genotyping technologies

    DEFF Research Database (Denmark)

    Studer, Bruno; Kölliker, Roland

    2013-01-01

    In the recent years, single nucleotide polymorphism (SNP) markers have emerged as the marker technology of choice for plant genetics and breeding applications. Besides the efficient technologies available for SNP discovery even in complex genomes, one of the main reasons for this is the...... availability of high-throughput platforms for multiplexed SNP genotyping. Advancements in these technologies have enabled increased flexibility and throughput, allowing for the generation of adequate SNP marker data at very competitive cost per data point....

  13. Radiopharmacy education in Brazil

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    Ralph Santos-Oliveira

    2014-01-01

    Full Text Available The number of schools of pharmacy has been increasing each year in Brazil. From 2002 to 2013 over 300 new schools were opened in Brazil with a final number of 415 schools of pharmacy in operation around the country. Of these schools, only 28 schools offer a course in radiopharmacy (7.77%. However, the demand for such trained professionals has grown exponentially in Brazil, especially following amendment 49 (February 2006 that broke the monopoly on the production, distribution, and marketing of short half-life radiopharmaceuticals, and the recent constitutional amendment project 517/2010, which was approved in the last instance and is waiting for final approval by the President. Thus, in this scenario, there are a total of 417 radiopharmacy services across the country waiting for qualified professionals to fill posts. However, while there are insufficient trained professionals, radiopharmacy services under the aegis of Agencia Nacional de Vigilancia Sanitaria - Brazilian Health Surveillance Agency allow biomedical scientists and biologists to perform specialized functions as developed in radiopharmacy services without the presence of radiopharmacists.

  14. Predictors of hepatitis B virus genotype and viraemia in HIV-infected patients with chronic hepatitis B in Europe

    DEFF Research Database (Denmark)

    Soriano, Vincent; Mocroft, Amanda; Peters, Lars; Rockstroh, Juergen; Antunes, Francisco; Kirkby, Nikolai; de Wit, Stephane; Monforte, Antonella d'Arminio; Flisiak, Robert; Lundgren, Jens

    2010-01-01

    Both natural history and treatment outcome of hepatitis B virus (HBV) infection are influenced by genotypes and viral load. Information about factors determining HBV genotype distribution and viraemia in HIV/HBV-co-infected patients is scarce....

  15. Genetic relationships among some hawthorn (Crataegus spp.) species and genotypes.

    Science.gov (United States)

    Yilmaz, Kadir Ugurtan; Yanar, Makbule; Ercisli, Sezai; Sahiner, Hatice; Taskin, Tuncer; Zengin, Yasar

    2010-10-01

    The genus Crataegus is well distributed in Turkey as a wild plant, with numerous, inherently variable species and genotypes. RAPD markers were used to study 17 hawthorn genotypes belonging to Crataegus monogyna ssp. monogyna Jacq (2 genotypes), C. monogyna ssp. azarella Jacq (1), Crataegus pontica K.Koch (3), Crataegus orientalis var. orientalis Pallas Ex Bieb (3), Crataegus pseudoheterophylla Pojark (1), Crataegus aronia var. dentata Browicz (1), C. aronia var. aronia Browicz (4), and Crateagus x bornmuelleri Zabel (2). The 10 RAPD primers produced 72 polymorphic bands (88% polymorphism). A dendrogram based on Jaccard's index included four major groups and one outgroup according to taxa. The lowest genetic variability was observed within C. aronia var. aronia genotypes. The study demonstrated that RAPD analysis is efficient for genotyping wild-grown hawthorns. PMID:20640884

  16. Phosphorus Use Efficiency by Brazilian Upland Rice Genotypes Evaluated by the 32P Dilution Technique

    International Nuclear Information System (INIS)

    The objectives of this work were to identify the most efficient upland rice genotypes in phosphorus (P) utilization, and to verify if P from the seed affects the classification of upland rice genotypes on P uptake efficiency. The experiment was conducted in a greenhouse of the Center for Nuclear Energy in Agriculture (CENA/USP), Piracicaba, Sao Paulo, Brazil, using the 32P isotope technique, and plants were grown in pots with samples of dystrophic Typic Haplustox (Oxisol). The experimental design was completely randomized with four replications. The treatments consisted of 47 upland rice genotypes and two standard plant species, efficient or inefficient in P uptake. The results were assessed through correlation and cluster analysis (multivariate). The Carisma upland rice genotype was the most efficient in P uptake, and Caripuna was the most efficient on P utilization. The P derived from seed does not influence the identification of upland rice genotypes in P uptake efficiency. (author)

  17. Environmental factors influencing the distribution of three species within the genus Persephona Leach, 1817 (Crustacea, Decapoda, Leucosiidae in two regions on the northern coast of São Paulo State, Brazil

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    Rafaela T Pereira

    2014-05-01

    Full Text Available Patterns of spatio-temporal distribution of Brachyura are determined by the interaction among life history traits, inter and intraspecific relationships, as well as by the variation of abiotic factors. This study aimed to characterize patterns of spatio-temporal distribution of Persephona lichtensteinii, Persephona mediterranea and Persephona punctata in two regions of the northern coast of São Paulo State, southeastern region of Brazil. Collections were done monthly from July 2001 to June 2003 in Caraguatatuba and Ubatuba, using a shrimp fishery boat equipped with double-rig nets. The patterns of species distribution were tested by means of redundancy analysis (RDA and generalized linear mixed models (GLMM in relation to the recorded environmental factors (BT: bottom temperature, BS: bottom salinity, OM: organic matter and granulometry (Phi. The most influent environmental factor over the species distribution was the Phi, and the ascendant order of influence was P. lichtensteinii, P. punctata and P. mediterranea. The greater abundance of P. mediterranea showed a conservative pattern of distribution for the genus in the sampled region. The greater occurrence of P. punctata and P. lichtensteinii, in distinct transects than those occupied by P. mediterranea, seems to be a strategy to avoid competition among congeneric species, which is related to the substratum specificity.

  18. Distribution of alpha and beta thalassaemia genotypes in childbearing age people in Shanwei%汕尾市育龄人群中α、β地中海贫血基因型的分布调查

    Institute of Scientific and Technical Information of China (English)

    孙妙婷; 董响波; 黄琦玲

    2014-01-01

    objective To understand the distribution of alpha and beta thalassaemia genotypes in childbearing age people in Shanwei.Methods Pregnant woment and their spouses 1200 cases were chosen from the hospitals of each area from January 1st to December 1st 2013 as study objects using cluster sampling method.Alpha beta thalassaemia were investigated respectively.Results Among the 1200 blood samples,6 kinds of alpha thalassaemia genotypes were detected,with a total of 62 cases,63 alleles.The alpha thalassaemia gene carrying rate was 5.25% (63/1200).The genotype composition:31-a3.7/aa,49.21% of the total; 18-aSEA/aa,28.57% of the total; 7-a4.2/aa,11.11% of the total; 2-aTHAI/aa,3.17% of the total; 3--SEA/--SEA,4.76% of the total; 2-aCSa/aa,3.17% of the total.13 cases were detected with beta thalassemia gene,with a beta thalassemia gene carrying rate of 1.08%.There were five genetic types of beta thalassemia gene including IVS-2-654 (C → T) and-28 (A → G) (both accounted for 23.08%),CD41/42 (-TCTT) (30.77%),CD17 (A → T) (15.38%),and beta ECD26 (C → A) (7.69%).Conclusions The alpha thalassaemia gene carrying rate and beta thalassaemia carrying rate of Shanwei are relatively lower among the whole province.However,but the analysis of the data showed that the carrying rate was high,thalassaemia genes were carried mainly by people,most of which are natives,in regions with complex genetic background.%目的 了解汕尾市育龄人群中α、β地中海贫血基因型的分布情况.方法 采用整群抽样方法选择2013年1月1日至2013年12月31日各地区部分住院分娩和引产的孕产妇、配偶共计1200例作为研究对象,分别进行α-地中海贫血和β-地中海贫血调查.结果 在1200份血液标本中共计检测出6种α-地中海贫血基因型,共计62例,63个等位基因,α-地中海贫血基因携带率为5.25%(63/1200).其基因型构成比:-a3.7/aa 31个,占总数的49.21%;-aSEA/aa 18个,占总数的28.57

  19. Distribution of hepatitis B virus genotypes and viral load levels in Brazilian chronically infected patients in São Paulo city Distribuição dos genótipos do vírus da hepatite B e níveis de carga viral em pacientes brasileiros cronicamente infectados na cidade de São Paulo

    Directory of Open Access Journals (Sweden)

    Rosana Alcalde

    2009-10-01

    Full Text Available The objective of the present study was to evaluate the serum viral load in chronically infected Hepatitis B virus (HBV patients and to investigate the distribution of HBV genotypes in São Paulo city. Quantitative HBV-DNA assays and HBV genotyping have gained importance for predicting HBV disease progression, have been employed for assessing infectivity, for treatment monitoring and for detecting the emergence of drug resistance. Twenty-nine Brazilian patients with suspected chronic hepatitis B were studied, using real time PCR for viral load determination and direct DNA sequencing for the genotyping. The serology revealed chronic HBV infection in 22 samples. The HBV-DNA was positive in 68% samples (15/22. The phylogenetic analysis disclosed that eleven patients were infected with HBV genotype A, two with genotype F and two with genotype D. Thus, the genotype A was the most prevalent in our study.O objetivo do presente estudo foi avaliar a carga viral no soro de pacientes cronicamente infectados pelo vírus da Hepatite B (HBV e investigar a distribuição de genótipos HBV na cidade de São Paulo. PCR quantitativo do HBV e genotipagem ganharam importância para a previsão de progressão da doença, empregada para avaliar a infectividade, para tratamento e acompanhamento e para detectar o aparecimento de resistência aos anti-retrovirais. Vinte e nove pacientes brasileiros com suspeita de hepatite B crônica foram estudados, utilizando PCR em tempo real para a determinação da carga viral e seqüenciamento direto para determinação do genótipo. A sorologia revelou que 22 estavam, de fato, cronicamente infectados pelo HBV. O HBV-DNA foi positivo em 68% das amostras (15/22. Em sete casos, HBV-DNA foi indetectável por PCR quantitativo. A análise filogenética mostra que onze pacientes foram infectados com hepatite B genótipo A, dois com genótipo F e dois com genótipo D. Desta forma, o genótipo A foi o mais prevalente em nosso estudo.

  20. Distribution of phlebotomine fauna (Diptera: Psychodidae across an urban-rural gradient in an area of endemic visceral leishmaniasis in northern Brazil

    Directory of Open Access Journals (Sweden)

    Davi Marcos Souza de Oliveira

    2011-12-01

    Full Text Available The number of visceral leishmaniasis (VL cases has increased over the past 10 years in Brazil, especially in the North and Northeast regions of the country. The aim of this study was to evaluate the urbanisation of VL vectors in Barcarena, Pará, an area in northern Brazil where VL is endemic. Sandflies were captured using Centers for Disease Control (CDC light traps along an urban-rural gradient. The CDC traps were installed inside hen houses at a height of 150 cm. A total of 5,089 sandflies were collected and 11 species were identified. The predominant species was Lutzomyia longipalpis (rate of 95.15%, which suggests its participation in the transmission of VL. A total of 1,451 Lu. longipalpis females were dissected and no Leishmania infections were detected. Most of the sandflies were captured at the border of a forest (88.25% and no flies were captured in the urban area, which suggests that transmission is still restricted to rural sites. However, the fact that a specimen was collected in an intermediate area indicates that urbanisation is a real possibility and that vector monitoring is important.

  1. Use of space and temporal distribution of Trichechus manatus manatus Linnaeus in the region of Sagi, Rio Grande do Norte State, Brazil (Sirenia, Trichechidae

    Directory of Open Access Journals (Sweden)

    Danielle Paludo

    2002-03-01

    Full Text Available The marine manatee Trichechus manatus manatus Linnaeus, 1758 is endangered in the Brazilian Atlantic coast due to indiscriminate hunting practiced in the past, and to the low reproductive rate of the species. This work studies its use of space and temporal occurrence in the coastal area of Sagi, Northeastern Brazil. Daily observations from the beach of the animals in the sea were made during daytime from 1990 through 1993. The presence of reefs covered with marine algae is a determinant factor in the occurrence of the manatee. They were sighted feeding on algae that grow over the reefs close to beaches that were of high energy during high tide. The range used by manatees shifted according to tide. They occur in depths of 0.4 to 3.8 m; the distance from the beach varies according to the tide level. They show marked seasonality of occurrence, with higher frequencies in December - January and lowest in June - July. Two possible causes of the seasonal occurrence are discussed. Sagi is important for the conservation of the species in Northeastern Brazil as feeding and reproductive grounds.

  2. TRI12 based quantitative real-time PCR assays reveal the distribution of trichothecene genotype of F. graminearum and F. culmorum isolates in Danish small grain cereals

    DEFF Research Database (Denmark)

    Nielsen, L. K.; Jensen, J. D.; Rodríguez, A.;

    2012-01-01

    Quantitative real-time PCR assays, based on polymorphisms in the TRI12 gene of the trichothecene pathway, were developed to identify and quantify the trichothecene genotypes producing 3-acetyl-deoxynivalenol (3ADON), 15-acetyl-deoxynivalenol (15ADON) or nivalenol (NIV) in the Fusarium graminearum...

  3. Human papillomavirus genotypes in human immunodeficiency virus-positive patients with anal pathology in Madrid, Spain

    OpenAIRE

    García-Espinosa, Benjamín; Moro-Rodríguez, Ernesto; Álvarez-Fernández, Emilio

    2013-01-01

    Background We studied anal specimens to determine the distribution of human papillomavirus (HPV) genotypes and co-infection occurrence. This information will contribute to the knowledge of HPV genotype distributions and provide an estimate of the prevalence of different oncogenic HPV genotypes found in patients in Madrid (Spain). Methods We studied a total of 82 anal biopsies from the Hospital General Universitario Gregorio Marañón of Madrid. These included 4 specimens with benign lesions, 52...

  4. Human papillomavirus genotypes in asymptomatic young women from public schools in Rio de Janeiro, Brazil Genótipos de papilomavírus humanos em mulheres jovens assintomáticas de escolas públicas do Rio de Janeiro, Brasil

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    Ledy Horto Santos Oliveira

    2010-02-01

    Full Text Available INTRODUCTION: The aim of this work was to survey HPV information from a random population of young women from Rio de Janeiro, Brazil. METHODS: This cross-sectional study included cervical samples from 241 female students. To determine human papillomavirus status, polymerase chain reaction amplification was performed. HPV typing was determined by restriction fragment length polymorphism analysis. Demographic data, life style, sexual and gynecological history were obtained through use of a structured questionnaire. RESULTS: The average age of the women was 19.6 years-old (SD=3.4 years. HPV prevalence was 27.4%. Nineteen different HPV genotypes were detected, including 13 high risk types. HPV 16 was the most prevalent type (6.2%, followed by 31 (4.1 % and 66 (3.7%. Most of the oncogenic types belonged to the A9 species (28/48. The frequency of women infected by at least one oncogenic type was significantly higher than those only infected by low risk types (18.7% versus 7.5%. Cervical changes were detected in 12.5% of the sample and were significantly linked to infection with HPV types of the A9 species. Demographic variables, sexual initiation, or number of sexual partners were not associated with HPV prevalence, variety of HPV genotypes or oncogenic types. CONCLUSIONS: The relative frequency of HPV genotypes other than vaccine types in young females should be taken into account when evaluating vaccination strategies. Due to the high prevalence of HPV infection among the population studied, implementation of sex education in schools, promotion of condom use and an organized screening program to prevent cervical cancer must be encouraged for this age group.INTRODUÇÃO: O objetivo deste trabalho foi investigar a infecção por HPV em uma população randômica de mulheres jovens no estado do Rio de Janeiro, Brasil. MÉTODOS: Este estudo incluiu amostras cervicais de 241 jovens. A detecção de papilomavírus humanos foi realizada pela reação da

  5. Brazil; Selected Issues Paper

    OpenAIRE

    International Monetary Fund

    2015-01-01

    This Selected Issues paper examines infrastructure investment in Brazil. Brazil has inferior overall infrastructure quality relative to almost all its export competitors. Brazil’s infrastructure endowment ranks low by international standards, and its low quality affects productivity, market efficiency, and competitiveness. Areas in which Brazil’s competitiveness has lagged include, but are not limited to, education, innovation, governance, and justice. Brazil’s infrastructure gap has be...

  6. Offshore distribution patterns of the cyanobacterium Trichodesmium erythraeum ehrenberg and associated phyto- and bacterioplankton in the southern Atlantic coast (Paraná, Brazil

    Directory of Open Access Journals (Sweden)

    Siqueira Adriana

    2006-01-01

    Full Text Available Studies were carried out on Thrichodesmium erythraeum occurring on the inner shelf in the state of Paraná, Brazil. Temperature, salinity, rainfall, wind velocity, total bacteria, bacterial biomass, chlorophyll-a, phytoplankton, Anabaena sp., Merismopedia sp. and T. erythraeum densities were measured in surface water. Centric and pennate diatoms, Anabaena sp. and Merismopedia sp. were most abundant at 15 m isobath, while dinoflagellate abundance was relatively constant among stations. Similarly, total bacterial densities were relatively homogeneous throughout the sampling area, suggesting that blooms of T. erythraeum were not yet in the senescent phase. Results showed that T. erythraeum was capable of surviving in relatively inhospitable environmental conditions, due to its ability to fix nitrogen and to photosynthesis at high light intensities.

  7. Infestation of Pseudopiazurus papayanus (Marshall) (Coleoptera: Curculionidae) on Carica spp. and Vasconcella spp. genotypes

    International Nuclear Information System (INIS)

    The papaya borer weevil, Pseudopiazurus papayanus (Marshall), is generally considered a secondary pest, but it has been reported in high infestations in Northeast Brazil. This work aimed at evaluating the occurrence of P. papayanus and reporting its infestation level in papaya genotypes kept at the germplasm bank of EMBRAPA Cassava and Tropical Fruits (Cruz das Almas, Bahia, Brazil). The number of larvae, pupae and adults found in each plant of 65 Carica spp. genotypes and of three Vasconcella spp. genotypes was registered in three to five plants of each genotype, by cutting the exsudating trunks lengthwise. Papaya borer weevil was found in C. papaya and V. cauliflora but not in those of V. quercifolia. Among the evaluated genotypes, 52.4% of those belonging to the Solo group were infested, against 25.0% of the Formosa group. Larval infestation was the best criterion for sorting out genotypes concerning this insect infestation. This is also the first occurrence of the papaya borer weevil . (author)

  8. Origin and evolution of dengue virus type 3 in Brazil.

    Directory of Open Access Journals (Sweden)

    Josélio Maria Galvão de Araújo

    Full Text Available The incidence of dengue fever and dengue hemorrhagic fever in Brazil experienced a significant increase since the emergence of dengue virus type-3 (DENV-3 at the early 2000s. Despite the major public health concerns, there have been very few studies of the molecular epidemiology and time-scale of this DENV lineage in Brazil. In this study, we investigated the origin and dispersion dynamics of DENV-3 genotype III in Brazil by examining a large number (n=107 of E gene sequences sampled between 2001 and 2009 from diverse Brazilian regions. These Brazilian sequences were combined with 457 DENV-3 genotype III E gene sequences from 29 countries around the world. Our phylogenetic analysis reveals that there have been at least four introductions of the DENV-3 genotype III in Brazil, as signified by the presence of four phylogenetically distinct lineages. Three lineages (BR-I, BR-II, and BR-III were probably imported from the Lesser Antilles (Caribbean, while the fourth one (BR-IV was probably introduced from Colombia or Venezuela. While lineages BR-I and BR-II succeeded in getting established and disseminated in Brazil and other countries from the Southern Cone, lineages BR-III and BR-IV were only detected in one single individual each from the North region. The phylogeographic analysis indicates that DENV-3 lineages BR-I and BR-II were most likely introduced into Brazil through the Southeast and North regions around 1999 (95% HPD: 1998-2000 and 2001 (95% HPD: 2000-2002, respectively. These findings show that importation of DENV-3 lineages from the Caribbean islands into Brazil seems to be relatively frequent. Our study further suggests that the North and Southeast Brazilian regions were the most important hubs of introduction and spread of DENV-3 lineages and deserve an intense epidemiological surveillance.

  9. Origin and evolution of dengue virus type 3 in Brazil.

    Science.gov (United States)

    de Araújo, Josélio Maria Galvão; Bello, Gonzalo; Romero, Hector; Nogueira, Rita Maria Ribeiro

    2012-01-01

    The incidence of dengue fever and dengue hemorrhagic fever in Brazil experienced a significant increase since the emergence of dengue virus type-3 (DENV-3) at the early 2000s. Despite the major public health concerns, there have been very few studies of the molecular epidemiology and time-scale of this DENV lineage in Brazil. In this study, we investigated the origin and dispersion dynamics of DENV-3 genotype III in Brazil by examining a large number (n=107) of E gene sequences sampled between 2001 and 2009 from diverse Brazilian regions. These Brazilian sequences were combined with 457 DENV-3 genotype III E gene sequences from 29 countries around the world. Our phylogenetic analysis reveals that there have been at least four introductions of the DENV-3 genotype III in Brazil, as signified by the presence of four phylogenetically distinct lineages. Three lineages (BR-I, BR-II, and BR-III) were probably imported from the Lesser Antilles (Caribbean), while the fourth one (BR-IV) was probably introduced from Colombia or Venezuela. While lineages BR-I and BR-II succeeded in getting established and disseminated in Brazil and other countries from the Southern Cone, lineages BR-III and BR-IV were only detected in one single individual each from the North region. The phylogeographic analysis indicates that DENV-3 lineages BR-I and BR-II were most likely introduced into Brazil through the Southeast and North regions around 1999 (95% HPD: 1998-2000) and 2001 (95% HPD: 2000-2002), respectively. These findings show that importation of DENV-3 lineages from the Caribbean islands into Brazil seems to be relatively frequent. Our study further suggests that the North and Southeast Brazilian regions were the most important hubs of introduction and spread of DENV-3 lineages and deserve an intense epidemiological surveillance. PMID:22970331

  10. Datafile: Brazil

    International Nuclear Information System (INIS)

    There is as yet little to show for the enormous investment made by Brazil over the past 20 years in nuclear power and the fuel cycle. The only nuclear power plant (657MWe PWR) in operation has had a poor performance record and the two reactors (1309MWe PWRs) under construction are more than ten years behind the original schedule. Aspirations of building commercial fuel cycle facilities have proved extremely optimistic. In the latest reorganization of the industry, the construction and operation of nuclear power stations is entrusted to the national utility and the various civilian/military R and D efforts in the fuel cycle are being integrated under civilian supervision. This should lead to greater accountability and efficiency in the future. (author)

  11. Analyzing natural gas distribution in Brazil through EVA (Economic Value Added); Analise economico-financeira da industria de distribuicao de gas natural brasileiro sob a otica da geracao de valor

    Energy Technology Data Exchange (ETDEWEB)

    Marques, Fernando Rodrigues; Parente, Virginia [Universidade de Sao Paulo (USP), SP (Brazil). Inst. de Eletrotecnica e Energia

    2008-07-01

    Although the Brazilian gas market has been showing steady growth and positive news regarding new discoveries, it is not immune to be questioned about its capacity of value generation, and, in particular, if the new companies, operating in distribution have generated it. Value creation, and its management, has become one of the main activities of the modern corporation in order to align the management and shareholders interests. Despite its advancements, the Brazilian NG industry can be considered at its early stages when compared to those of other countries whose industry is more traditional and mature. The process of unbundling of the gas industry, as well as of the public utilities, has become one of the icons of the Brazilian government policies since the mid 90's. Taking into account regulatory change which had only allowed in the last couple of decades the participation of private ownership into the domestic gas market, a follow up of these companies' performances is of interest. Following the concept of value generation, the present study examines the Brazilian gas distribution sector. Based on a detailed analysis of the financial statements of some of the main companies in the sector, that together represent around 68% of the total Brazilian market, this paper verifies whether the gas distribution sector have presented a positive or negative EVA{sup R}, in other words, if, during the period from 2002 to 2007, these newly companies in the gas industry have created or destroyed value in Brazil. (author)

  12. The obstacles for the investments in natural gas distribution infrastructure in Brazil; Os obstaculos aos investimentos na rede de distribuicao de gas natural no Brasil

    Energy Technology Data Exchange (ETDEWEB)

    Almeida, Edmar Luiz Fagundes de; Bueno, Salua Saud; Selles, Vitor [Universidade Federal do Rio de Janeiro (UFRJ), RJ (Brazil). Inst. de Economia

    2004-07-01

    This paper analyses the main obstacles for the expansion of the Brazilian gas distribution pipelines infrastructure. The paper examines the evolution of investments in the gas chain and highlights the existence of an important unbalance between the level of investments in the upstream and transportation segments and the level of investment in the distribution network. It is clear that the level of investments in the distribution segment is not following the pace of expansion of the other segments. Given this conclusion, the paper examines the potential for increasing the level of investment in the distribution segment by augmenting the debt level of distribution companies. By analyzing the main distribution companies' financial statements, the paper shows that they there is room for an expansion in investments through financial leverage. Finally, the paper examines the main financing obstacles that impede the companies to increase their investment level. (author)

  13. UV-visible scanning spectrophotometry and chemometric analysis as tools for carotenoids analysis in cassava genotypes (Manihot esculenta Crantz)

    OpenAIRE

    Moresco, Rodolfo; Uarrota, Virgílio Gavicho; Pereira, Aline; Tomazzoli, Maíra Maciel; Nunes, Eduardo da C.; Peruch, Luiz Augusto Martins; Gazzola, Jussara; Costa, Christopher Borges; Rocha, Miguel; Maraschin, Marcelo

    2015-01-01

    In this study, the metabolomics characterization focusing on the carotenoid composition of ten cassava (Manihot esculenta) genotypes cultivated in southern Brazil by UV-visible scanning spectrophotometry and reverse phase-high performance liquid chromatography was performed. Cassava roots rich in -carotene are an important staple food for populations with risk of vitamin A deficiency. Cassava genotypes with high pro-vitamin A activity have been identified as a strategy to reduce the prevalenc...

  14. Epidemiological Scenario of Dengue in Brazil

    OpenAIRE

    Fares, Rafaelle C. G.; Souza, Katia P. R.; Germán Añez; Maria Rios

    2015-01-01

    Dengue is the most important reemerging mosquito-borne viral disease worldwide. It is caused by any of four Dengue virus types or serotypes (DENV-1 to DENV-4) and is transmitted by mosquitoes from the genus Aedes. Ecological changes have favored the geographic expansion of the vector and, since the dengue pandemic in the Asian and Pacific regions, the infection became widely distributed worldwide, reaching Brazil in 1845. The incidence of dengue in Brazil has been frequently high, and the num...

  15. Land reform and landholdings in Brazil

    OpenAIRE

    Assunção, Juliano

    2006-01-01

    Land and wealth are closely related in rural Brazil, a country characterized by high levels of inequality in terms of income or landholdings. After presenting a historical retrospective of land concentration and land reform in Brazil, this study evaluates the impact of the land reform programme undertaken in the 1990s on land ownership and land distribution. It is shown that the programme increased landownership among poor rural families and those with less educated household heads, reducing ...

  16. 新疆维族妇女感染的HPV型别分布的研究%Distribution and Prevalence of Human Papillomavirus(HPV)Genotypes in 2473 Cytological Samples OfXinjiang Uyghur Women

    Institute of Scientific and Technical Information of China (English)

    郑义; 杨磊; 高丽敏; 井明霞; 张金丽; 芮东升; 王英红; 阿曼古丽; 何玲; 赵娟

    2012-01-01

    Objective:To investigate the types distribution of human papillomavirus(HPV)in women in Xinjiang Uyghur women.Methods:Women between 30 and 59 were chosen in cluster stratified sampling from XiaPuTaoLe Town,Xinjiang and received a population-based cervical cancer screening After consent every woman was detected and genotyped HPV DNA by PCR and Gene Chip.Results:2473 women were chosen.The total infection rate of HPV was 9.1%.The positive rate of HPV-16 infection was 6.6% among the High-Risk HPV indicating it was the most common infection.Other High-Risk HPV infection rates were ranked from high to low:HPV-59,HPV-56,HPV-18,HPV-33,HPV-58,HPV-51,HPV-31,HPV-45,HPV-52,HPV-35,HPV-39,HPV-68.HPV-11 was the most common infection among the Low-Risk HPV types.Other Low-Risk HPV infection rates were ranked from high to low:HPV-42,HPV-43,HPV-6,HPV-53,HPV-66,HPV-73.HPV-44,-83,-MM4 were not detected.The multiple infection rate was 34.2%.Conclusion:HPV-16 was the most common types in the study population.The next most common types of HPV were HPV59,56,18,33.Xinjiang Uighur women had the relatively higher risk of suffering HPV59 infection indicating the specificity of HPV infection in Xinjiang Uighur women.%目的:探讨人乳头瘤状病毒(Human papillomavirus,HPV)在新疆南部维族妇女人群中的型别分布情况.方法:以年龄在30-59岁的新疆伽师县夏普吐勒乡维吾尔族妇女人群为基础进行筛查,签署知情同意书后,采集受试者宫颈脱落细胞,利用PCR和基因芯片技术检测HPV DNA并分型.结果:共2473名妇女入选.HPV总的感染率为9.1%,高危型中HPV-16的感染率最高为6.9%,其他高危型的感染率从高到低依次为:HPV-59、HPV-56、HPV-18、HPV-33、HPV-58、HPV-51、HPV-31、HPV-45、HPV-52、HPV-68、HPV-35、HPV-39.低危型中HPV11感染率最高,其他低危型的感染率从高到低依次为HPV-42、HPV-43、HPV-6、HPV-53、HPV-66、HPV-73.HPV-44、-83、-MM4没检测到.多重感染率为34.2

  17. Genetic parameters and simultaneous selection for root yield, adaptability and stability of cassava genotypes

    Directory of Open Access Journals (Sweden)

    João Tomé de Farias Neto

    2013-12-01

    Full Text Available The objective of this work was to estimate genetic parameters and to evaluate simultaneous selection for root yield and for adaptability and stability of cassava genotypes. The effects of genotypes were assumed as fixed and random, and the mixed model methodology (REML/Blup was used to estimate genetic parameters and the harmonic mean of the relative performance of genotypic values (HMRPGV, for simultaneous selection purposes. Ten genotypes were analyzed in a complete randomized block design, with four replicates. The experiment was carried out in the municipalities of Altamira, Santarém, and Santa Luzia do Pará in the state of Pará, Brazil, in the growing seasons of 2009/2010, 2010/2011, and 2011/2012. Roots were harvested 12 months after planting, in all tested locations. Root yield had low coefficients of genotypic variation (4.25% and broad-sense heritability of individual plots (0.0424, which resulted in low genetic gain. Due to the low genotypic correlation (0.15, genotype classification as to root yield varied according to the environment. Genotypes CPATU 060, CPATU 229, and CPATU 404 stood out as to their yield, adaptability, and stability.

  18. Analysis of hepatitis B virus genotype changes in patients with chronic hepatitis B infection on tenofovir therapy.

    Science.gov (United States)

    Chauhan, Ranjit; Singh, Avishek K; Rooge, Sheetalnath; Varshney, Aditi; Kumar, Manoj; Sarin, Shiv K

    2016-08-01

    Antiviral therapy for chronic hepatitis B (CHB) is often required for prolonged periods. We investigated the instance of one HBV genotype switching to another during tenofovir therapy. Of the 67 patients, genotype A was present in 6 (8.9%), D in 43 (65.6%), C in 1 (1.5%), and mixed in 17 (23.8%) patients. Genotype changes were detected in 51 (76.1%) patients on therapy during a follow-up of 192 (range 52-312) weeks. Inter-genotype changes were seen in 17 (33.3%) and intra-genotype in 28 (55%) and both inter- and intra-genotype in 6 of 51 (11.7%) patients. The distribution of genotypes in patients achieving complete virological response was genotype D, 32/43 (74.4%); genotype A, 6/6 (100%); and mixed genotypes, 13/17 (76.47%). The cumulative time of genotype switch among genotype A was 12 months (range 6-18), in genotype D, 12 months (range 6-48), and mixed genotype, 18 months (range 6-24). The type of inter-genotype switch most frequently detected among genotype A1 was from A1 to D1 5/6 (83.3%), followed by mixed to genotype D3 7/13 (54%) and among intra-genotype changes, from D1 to D3 in 14/20 (70%). Pretreatment HBV genotype was the only factor predicting inter-genotype switches with genotype A or mixed genotypes more likely to undergo inter-genotype switches as compared to genotype D patients (OR 66.6 [13.6-327.0, P < 0.001]). Compared to genotype D, genotype A, and mixed genotypes are more inclined to switch while on tenofovir therapy. Genotypes tend to switch and select to a particular type possibly due to constant antiviral drug pressure. J. Med. Virol. 88:1364-1375, 2016. © 2016 Wiley Periodicals, Inc. PMID:26858138

  19. Noise in Genotype Selection Model

    Institute of Scientific and Technical Information of China (English)

    AI Bao-Quan; CHEN Wei; WANG Xian-Ju; LIU Guo-Tao; WEN De-Hua; LIU Liang-Gang

    2003-01-01

    We study the steady state properties ofa genotype selection model in presence of correlated Gaussian whitenoise. The effect of the noise on the genotype selection model is discussed. It is found that correlated noise can breakthe balance of gene selection and induce the phase transition which can makes us select one type gene haploid from agene group.

  20. Genotyping of Brazilian Giardia duodenalis human axenic isolates

    Directory of Open Access Journals (Sweden)

    ST Coradi

    2011-01-01

    Full Text Available Giardia duodenalis is a complex species that comprises at least seven distinct genetic groups (A to G, but only genotypes A and B are known to infect humans and a wide variety of other mammals. Regardless of biological, biochemical and antigenic analysis, several isolates maintained in vitro were not genetically typed yet. So, in the present study, five Brazilian axenic isolates obtained from asymptomatic and symptomatic patients were typed in order to determine the major genetic groups to which the isolates belonged. DNA was extracted from axenic trophozoites, fragments of glutamate dehydrogenase (gdh and triosephosphate isomerase (tpi genes were amplified by PCR and the isolate genotyping was carried out using restriction fragment length polymorphism (RFLP and DNA sequencing for both genes. The results revealed that all isolates were assigned to genotype A at both analyzed loci. Indeed, DNA sequence analysis classified the four isolates obtained from asymptomatic individuals into subtype AII, while the isolate obtained from the symptomatic patient was typed as subtype AI. Despite of the limited number of isolates assessed, the findings presented herein provide interesting insights on the occurrence of Giardia genotypes in Brazil and hold the perspective for future molecular and epidemiological investigations.

  1. Isolation and identification of Acanthamoeba spp. from thermal swimming pools and spas in Southern Brazil.

    Science.gov (United States)

    Fabres, Laura Fuhrich; Rosa Dos Santos, Sayonara Peixoto; Benitez, Lisianne Brittes; Rott, Marilise Brittes

    2016-06-01

    Free-living amoebae (FLA) are widely distributed in soil and water. A few number of them are implicated in human disease: Acanthamoeba spp., Naegleria fowleri, Balamuthia mandrillaris and Sappinia diploidea. Species of Acanthamoeba can cause keratitis and brain infections. In this study, 72 water samples were taken from both hot tubs and thermal swimming pools in the city of Porto Alegre, RS, Brazil, to determine the presence of Acanthamoeba in the water as well as perform the phenotypic and genotypic characterization of the isolates. The identification of the isolates was based on the cysts morphology and PCR amplification using genus-specific oligonucleotides. When the isolates were submitted to PCR reaction only 8 were confirmed as belonging to the genus Acanthamoeba. The sequences analysis when compared to the sequences in the GenBank, showed genotype distribution in group T3 (12,5%), T5 (12,5%), T4 (25%) and T15 (50%). The results of this study confirmed the presence of potentially pathogenic isolates of free living amoebae in hot swimming pool and spas which can present risks to human health. PMID:27078644

  2. Genetic Diversity for Grain Yield and its Components in Local Rice (Oryza sativa L. Genotypes under Submergence

    Directory of Open Access Journals (Sweden)

    Basavaraj Kodihalli 1 and Dushyanthakumar B.M 2

    2014-03-01

    Full Text Available Genetic diversity among 49 local rice genotypes was worked out using Mahalanobis D2 statistic under submergence. On the basis of genetic distance, these genotypes were grouped into six clusters. Cluster I was the largest, consisting of 20 genotypes, while two genotypes present in cluster II, eight genotypes present in cluster III, twelve genotypes present in cluster IV, four genotypes present in cluster V and three genotypes present in cluster VI. There was no parallelism between genetic diversity and geographical distribution. The maximum inter cluster distance was between Cluster III and cluster V. Among the different characters studied, harvest index, straw yield/ plant (g and grain yield/ plant (g contributed significantly for the genetic diversity. The cluster II was characterized by maximum mean value for majority of these characters, hence ,Doddiga and Hasuli may be used a parents in future breeding programme. Genotypes of Cluster III and cluster V may be intercrossed to achieve wider segregation under submergence.

  3. Concentrations and distributions of metals in tissues of stranded green sea turtles (Chelonia mydas) from the southern Atlantic coast of Brazil

    International Nuclear Information System (INIS)

    Silver (Ag), cadmium (Cd), copper (Cu), lead (Pb) and zinc (Zn) concentrations were analyzed in tissues of juvenile green sea turtles (Chelonia mydas) found stranded along the southern Atlantic coast in Brazil. Green sea turtles were collected (n = 29), measured (curved carapace length: CCL) and had their muscle, liver, and kidney dissected for metal concentration measurements. Sex was identified in 18 individuals (10 females and 8 males) through gonad histology. No gender differences in CCL and tissue metal concentrations were observed. In the muscle, there was a negative correlation between CCL and Cd and Cu concentrations. Metal concentrations were lower in the muscle than in the liver and kidney. Zn concentration in the muscle was the highest of all metals analyzed (16.6 mg/kg). The kidney showed the highest concentrations of Pb, Cd and Zn (5.4, 28.3 and 54.3 mg/kg, respectively), while the liver had the highest values of Ag and Cu (0.8 and 100.9 mg/kg, respectively). Tissue Ag, Zn and Cd concentrations were similar to those found in green sea turtles from other regions while Cu and Pb values were elevated, likely due to the metal-rich water and sediment reported in the collection area. In the liver and kidney, concentrations of non-essential (Ag, Cd and Pb) and essential (Cu or Zn) metals were positively correlated, likely due to an induced metallothionein synthesis to protect tissue against the toxic effect of metals. This is the first study to report and correlate the concentrations of essential and non-essential metals in tissues of green sea turtles in the Brazilian southern Atlantic coast, an important feeding and developing area for this turtle species. - Highlights: •Juvenile female and male green sea turtles have similar concentrations of metals. •Kidney accumulated more Cd, Pb and Zn while liver accumulated more Ag and Cu. •Cu and Pb concentrations are elevated in liver of sea turtles from southern Brazil. •Concentrations of Cd and Cu in

  4. Concentrations and distributions of metals in tissues of stranded green sea turtles (Chelonia mydas) from the southern Atlantic coast of Brazil

    Energy Technology Data Exchange (ETDEWEB)

    da Silva, Cinthia Carneiro [Programa de Pós-Graduação em Ciências Fisiológicas – Fisiologia Animal Comparada, Instituto de Ciências Biológicas, Universidade Federal do Rio Grande, Av. Itália km 8, 96203-900, Rio Grande, Rio Grande do Sul (Brazil); Varela, Antonio Sergio; Barcarolli, Indianara Fernanda [Instituto de Ciências Biológicas, Universidade Federal do Rio Grande, Av. Itália km 8, 96203-900, Rio Grande, Rio Grande do Sul (Brazil); Bianchini, Adalto, E-mail: adaltobianchini@furg.br [Programa de Pós-Graduação em Ciências Fisiológicas – Fisiologia Animal Comparada, Instituto de Ciências Biológicas, Universidade Federal do Rio Grande, Av. Itália km 8, 96203-900, Rio Grande, Rio Grande do Sul (Brazil); Instituto de Ciências Biológicas, Universidade Federal do Rio Grande, Av. Itália km 8, 96203-900, Rio Grande, Rio Grande do Sul (Brazil)

    2014-01-01

    Silver (Ag), cadmium (Cd), copper (Cu), lead (Pb) and zinc (Zn) concentrations were analyzed in tissues of juvenile green sea turtles (Chelonia mydas) found stranded along the southern Atlantic coast in Brazil. Green sea turtles were collected (n = 29), measured (curved carapace length: CCL) and had their muscle, liver, and kidney dissected for metal concentration measurements. Sex was identified in 18 individuals (10 females and 8 males) through gonad histology. No gender differences in CCL and tissue metal concentrations were observed. In the muscle, there was a negative correlation between CCL and Cd and Cu concentrations. Metal concentrations were lower in the muscle than in the liver and kidney. Zn concentration in the muscle was the highest of all metals analyzed (16.6 mg/kg). The kidney showed the highest concentrations of Pb, Cd and Zn (5.4, 28.3 and 54.3 mg/kg, respectively), while the liver had the highest values of Ag and Cu (0.8 and 100.9 mg/kg, respectively). Tissue Ag, Zn and Cd concentrations were similar to those found in green sea turtles from other regions while Cu and Pb values were elevated, likely due to the metal-rich water and sediment reported in the collection area. In the liver and kidney, concentrations of non-essential (Ag, Cd and Pb) and essential (Cu or Zn) metals were positively correlated, likely due to an induced metallothionein synthesis to protect tissue against the toxic effect of metals. This is the first study to report and correlate the concentrations of essential and non-essential metals in tissues of green sea turtles in the Brazilian southern Atlantic coast, an important feeding and developing area for this turtle species. - Highlights: •Juvenile female and male green sea turtles have similar concentrations of metals. •Kidney accumulated more Cd, Pb and Zn while liver accumulated more Ag and Cu. •Cu and Pb concentrations are elevated in liver of sea turtles from southern Brazil. •Concentrations of Cd and Cu in

  5. Soroprevalência e genótipos do vírus da hepatite C em pacientes com lúpus eritematoso sistêmico (LES em Goiânia, Brasil Hepatitis C virus seroprevalence and genotypes in patients with systemic lupus erythematosus (SLE in Goiânia, Brazil

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    Vitalina de Souza Barbosa

    2005-08-01

    (HCV infection is a source of concern in rheumatology because of its extrahepatic manifestations. Many studies have reported association between HCV infection and rheumatological manifestations such as: musculoskeletal pain, essential mixed cryoglobulinemia, rheumatoid arthritis, Sjögren's syndrome, vasculitis, glomerulonephritis, Raynaud's phenomenon, polyarteritis nodosa, myositis, autoantibody and other connective tissue diseases. In previous studies developed in our region, prevalences of 0.9%, 1.4%, 1.8% and 2.0% were detected among pregnant women, blood donors, leprosy patients and health professionals, respectively. OBJECTIVE: to investigate the prevalence of hepatitis C virus infection among patients with systemic lupus erythematosus (SLE in Goiânia, Brazil. METHODS: 175 patients were interviewed and had blood samples tested for HCV antibodies (anti-HCV by a third generation enzyme linked immunosorbant assay (ELISA. RNA-HCV was detected by polymerase chain reaction (PCR with primers complementary the 5' non-coding region of the HCV genoma, in all anti-HCV positive serum samples and genotyped by a line probe assay. RESULTS: an overall HCV infection prevalence of 2.3% (4/175 was found. Genotyping of RNA-HCV positive samples revealed HCV type 1 in 3 (75% and type 3 in 1 (25% patient. Clinical course was favorable in all HCV positive patients, except one, who died due to renal insuficiency related to lupus nephritis. CONCLUSIONS: anti-HCV prevalence among patients with SLE was slitghly higher than the prevanlence observed in pregnant women, healthy blood donors and leprosy patients, and similar to health professionals.

  6. Phytoplankton and environmental factors in the Paraíba do Norte River Estuary, northeastern Brazil: composition, distribution and quantitative remarks

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    Roberto Sassi

    1991-01-01

    Full Text Available This paper reports the results obtained from studies on the estuarine phytoplankton of the Paraíba do Norte River in northeastern Brazil. Surface and near-bottom samples were taken at four stations numbered seawards, during high and low tides from September 1978 to September 1979. A total of 139 phytoplankters were encountered. Diatoms and dinoflagellates showed highest diversity in most saline areas. Typical freshwater organisms were restricted to stations I and II where salinity was more reduced. Maximum cell densities were: 11,256,000 cells/1, 4,380,000 cells/1, 1,276,000 cells/1 and 1,035,000 cells/1, for stations I, II, III and IV, respectively. Sewage enrichments were probably responsible for the greatest values of the first two stations. However, in these stations the turbidity reduces light penetration, limiting phytoplankton growth particularly during the rainy season. The phytoflagellates (maximum of up to 4,874,000 cells/1 and the diatoms Thalassiosira spp (maximum of up to 9,262,000 cells/1 were dominant during the annual cycle. Other important taxa were Navicula spp, Cylindrotheca closterium, Paralia sulcata, Thalassionema nitzschioides and the dinoflagellate Protoperidinium spp. Seasonal variations of phytoplankton densities, dissolved oxygen, phosphate, water transparency, temperature, salinity and suspended material are also presented.

  7. Distribution of the CCR5delta32 allele (gene variant CCR5) in Rondônia, Western Amazonian region, Brazil.

    Science.gov (United States)

    de Farias, Josileide Duarte; Santos, Marlene Guimarães; de França, Andonai Krauze; Delani, Daniel; Tada, Mauro Shugiro; Casseb, Almeida Andrade; Simões, Aguinaldo Luiz; Engracia, Vera

    2012-01-01

    Since around 1723, on the occasion of its initial colonization by Europeans, Rondonia has received successive waves of immigrants. This has been further swelled by individuals from northeastern Brazil, who began entering at the beginning of the twentieth century. The ethnic composition varies across the state according to the various sites of settlement of each wave of immigrants. We analyzed the frequency of the CCR5Δ32 allele of the CCR5 chemokine receptor, which is considered a Caucasian marker, in five sample sets from the population. Four were collected in Porto Velho, the state capital and the site of several waves of migration. Of these, two, from the Hospital de Base were comprised of HB Mothers and HB Newborns presenting allele frequencies of 3.5% and 3.1%, respectively, a third from the peri-urban neighborhoods of Candelária/Bate-Estaca (1.8%), whereas a fourth, from the Research Center on Tropical Medicine/CEPEM (0.6%), was composed of malaria patients under treament. The fifth sample (3.4%) came from the inland Quilombola village of Pedras Negras. Two homozygous individuals (CCR5Δ32/CCR5Δ32) were detected among the HB Mother samples. The frequency of this allele was heterogeneous and higher where the European inflow was more pronounced. The presence of the allele in Pedras Negras revealed European miscegenation in a community largely comprising Quilombolas. PMID:22481870

  8. Distribution of the CCR5delta32 allele (gene variant CCR5 in Rondônia, Western Amazonian region, Brazil

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    Josileide Duarte de Farias

    2012-01-01

    Full Text Available Since around 1723, on the occasion of its initial colonization by Europeans, Rondonia has received successive waves of immigrants. This has been further swelled by individuals from northeastern Brazil, who began entering at the beginning of the twentieth century. The ethnic composition varies across the state according to the various sites of settlement of each wave of immigrants. We analyzed the frequency of the CCR5L32 allele of the CCR5 chemokine receptor, which is considered a Caucasian marker, in five sample sets from the population. Four were collected in Porto Velho, the state capital and the site of several waves of migration. Of these, two, from the Hospital de Base were comprised of HB Mothers and HB Newborns presenting allele frequencies of 3.5% and 3.1%, respectively, a third from the peri-urban neighborhoods of Candelária/Bate-Estaca (1.8%, whereas a fourth, from the Research Center on Tropical Medicine/CEPEM (0.6%, was composed of malaria patients under treament. The fifth sample (3.4% came from the inland Quilombola village of Pedras Negras. Two homozygous individuals (CCR5Δ32/CCR5Δ32 were detected among the HB Mother samples. The frequency of this allele was heterogeneous and higher where the European inflow was more pronounced. The presence of the allele in Pedras Negras revealed European miscegenation in a community largely comprising Quilombolas.

  9. Effects of breed and nutrition on the productive traits of beef cattle in South East Brazil: Part 2-Tissue distribution and carcase composition.

    Science.gov (United States)

    Norman, G A; de Felicio, P E

    1982-01-01

    This paper is the second in a series recording the effects of breed and nutrition on the productive traits of Nelore, Guzerá, Charolais and Canchim cattle in south-east Brazil. Significant treatment variations were recorded in carcase bone weights but differences in meat to bone ratios were not sufficiently marked to demonstrate that bone might grow at the expense of muscle when animals are maintained on particularly severe nutritional regimes. A simple carcase weight to length ratio was shown to be highly correlated with total bone proportion but not with yield of saleable meat. Recovery of total saleable meat was only marginally and not significantly affected by breed but was significantly affected by treatment. The increased levels of fatness in the carcases of the zebu and, in particular, all animals finished in feedlot, that affected the yield of saleable meat, was also thought to be responsible for the decreased recovery of first quality meat in these carcases. In general, tissue differences were more noticeable between treatments than between breeds and reflected the varying nutritional status of the animals pre-slaughter. PMID:22054702

  10. Spatial distribution of polycyclic aromatic hydrocarbons in Terminalia catappa L. (Combretaceae) bark from a selected heavy road traffic area of Rio de Janeiro City, Brazil.

    Science.gov (United States)

    Pereira Netto, Annibal D; Barreto, Renata P; Moreira, Josino C; Arbilla, Graciela

    2007-04-01

    The levels of 21 polycyclic aromatic hydrocarbons (PAHs) with molecular weights between 128 Da (naphthalene) and 300 Da (coronene) were determined in Terminalia catappa L. (Combretaceae) bark. Tree bark samples were collected in the campus of Oswaldo Cruz Foundation, a green area located in a very intensive traffic area of Rio de Janeiro City, Brazil and about 10 km away from the city center. Samples were submitted to ultrasonic extraction with dichloromethane and analyzed by high-resolution gas chromatography-mass spectrometry. Individual PAH levels varied from 1.23 to 327 ng/g and phenanthrene, fluoranthene and pyrene predominated in all samples. Total PAH levels ranged from 242 to 1640 ng/g with a mean of 628 ng/g. The levels of total PAHs and of total carcinogenic PAHs showed not a clear dependence with tree location and distances to the main routes of that area. No correlation was observed also with PAH levels previously found in total suspended particulate thus indicating that in this area tree bark PAH levels cannot be used to assess their atmospheric levels. PMID:17010512

  11. Ecology of mosquitoes (Diptera: Culicidae in areas of Serra do Mar State Park, State of São Paulo, Brazil. II - Habitat distribution

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    Anthony Érico Guimarães

    2000-01-01

    Full Text Available The mosquito (Diptera: Culicidae ecology was studied in areas of Serra do Mar State Park, State of São Paulo, Brazil. Systematized biweekly human bait collections were made three times a day, for periods of 2 or 3 h each, in sylvatic and rural areas for 24 consecutive months (January 1991 to December 1992. A total of 24,943 adult mosquitoes belonging to 57 species were collected during 622 collective periods. Aedes scapularis, Coquillettidia chrysonotum, Cq. venezuelensis, Wyeomyia dyari, Wy. longirostris, Wy. theobaldi and Wy. palmata were more frequently collected at swampy and at flooded areas. Anopheles mediopunctatus, Culex nigripalpus, Ae. serratus, Ae. fulvus, Psorophora ferox, Ps. albipes and the Sabethini in general, were captured almost exclusively in forested areas. An. cruzii, An. oswaldoi and An. fluminensis were captured more frequently in a residence area. However, Cx. quinquefasciatus was the only one truly eusynanthropic. An. cruzii and Ae. scapularis were captured feeding on blood inside and around the residence, indicating that both species, malaria and arbovirus vectors respectively, may be involved in the transmission of these such diseases in rural areas.

  12. PRODUCTION AND DISTRIBUTION OF Jatropha curcas BIOMASS IN THE BRAZILIAN SEMIARID

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    Marcos Antônio Drumond

    2016-03-01

    Full Text Available In order to assess production and distribution of biomass shoots of different genotypes of Jatropha curcas under irrigation in the semiarid region of Pernambuco, Brazil, an experiment was established in Gabriela Farm, in the municipality of Santa Maria da Boa Vista-PE. The experimental design was randomized blocks with ten treatments (genotypes of Jatropha curcas, and three replications in row plots of six plants, with a single border and spacing of 3.0 x 2.0 m. Plants were fertilized with 150 g of NPK (06:24:12 at planting time, and a topdressing with 150 g.planta-1 NPK (10:10:10 applied at six and twelve months of age. The plants were irrigated weekly using a dripping system with an average water application of 20 l.plant-1 during the dry period of the region. At 24 months of age, the overall height of the plants, the average diameter of bifurcations at 1.30m from the soil level and the number of bifurcations at 0.5 m of height were evaluated. Twenty six fruit/ seed harvests were done weekly. Fruits were harvested ripe, before falling on the ground, for seven months. To determine dry biomass, the plants were cut at 0.30 m from soil level. The genotypes showed high agronomic uniformity, except for the variable number of bifurcations, where the genotype 1701 was superior to the genotypes 1501, 1602, 1703 and 1601. Biomass production of genotypes in irrigated conditions in the semiarid region is high and the distribution of biomass followed the decreasing order: root>fruit>thick branches>leaves>bark>thin branches.

  13. Distribution of CYP2D6 alleles and phenotypes in the Brazilian population.

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    Deise C Friedrich

    Full Text Available The CYP2D6 enzyme is one of the most important members of the cytochrome P450 superfamily. This enzyme metabolizes approximately 25% of currently prescribed medications. The CYP2D6 gene presents a high allele heterogeneity that determines great inter-individual variation. The aim of this study was to evaluate the variability of CYP2D6 alleles, genotypes and predicted phenotypes in Brazilians. Eleven single nucleotide polymorphisms and CYP2D6 duplications/multiplications were genotyped by TaqMan assays in 1020 individuals from North, Northeast, South, and Southeast Brazil. Eighteen CYP2D6 alleles were identified in the Brazilian population. The CYP2D6*1 and CYP2D6*2 alleles were the most frequent and widely distributed in different geographical regions of Brazil. The highest number of CYPD6 alleles observed was six and the frequency of individuals with more than two copies ranged from 6.3% (in Southern Brazil to 10.2% (Northern Brazil. The analysis of molecular variance showed that CYP2D6 is homogeneously distributed across different Brazilian regions and most of the differences can be attributed to inter-individual differences. The most frequent predicted metabolic status was EM (83.5%. Overall 2.5% and 3.7% of Brazilians were PMs and UMs respectively. Genomic ancestry proportions differ only in the prevalence of intermediate metabolizers. The IM predicted phenotype is associated with a higher proportion of African ancestry and a lower proportion of European ancestry in Brazilians. PM and UM classes did not vary among regions and/or ancestry proportions therefore unique CYP2D6 testing guidelines for Brazilians are possible and could potentially avoid ineffective or adverse events outcomes due to drug prescriptions.

  14. Methodology For Test Occurrence And Distribution Of Neotropical Otter (Lontra Longicaudis, Olfers, 1818 In Cananéia, South Coast Of The State Of São Paulo, Brazil

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    Silva R.

    2005-04-01

    Full Text Available For a further distribution and occurrence study of L. longicaudis in the region of Cananéia, south coast of the State of São Paulo, Brazil, a methodology adapted for the local conditions based on the “survey” method used with Lutra lutra was tested. The study site was divided in 35 quadrants of 2x2 km and in each one a body of water was chosen for the investigation. Each body of water was traveled for at least 2 km searching for evidences of the presence of otters. It was possible to produce an image of the distribution of the species in the area using the coordinates of the sites where the vestiges were found. This image showed the presence of otters in rivers and in the estuary and absence in the areas facing the open sea. In 12 out of 13 positive quadrants for the otter presence the first vestige was found in the first 800 m of monitoring. Therefore, we recommend a reduction of the area traveled in each bodies of water to 1 km, reducing the expenses and also increasing the sampled area. We also recommend the increase in the size of the quadrants due to the occurrence of otters in some quadrants considered negative by the method.

  15. Hereditary haemoglobin disorders in Brazil.

    Science.gov (United States)

    Zago, M A; Costa, F F

    1985-01-01

    The data on the incidence and variability of hereditary haemoglobin (Hb) disorders in Brazil are reviewed. The most common abnormalities are HbS, HbC and beta-thalassaemias. Both homozygotes and compound heterozygotes for these genes (i.e., HbS/HbC disease, S/beta-thalassaemia, C/beta-thalassaemia) are common, owing to the free miscegenation of populations of Mediterranean and African ancestry. The diversity of beta-thalassaemias is similar to that observed in other regions. beta(0)-Thalassaemia is more frequent than the beta(+) variant among affected individuals. Most patients are descendants of Italian immigrants but occasional cases have other racial origins. Patients with thalassaemia major are mostly beta (0) homozygotes, while thalassaemia intermedia is more heterogeneous, including a variety of genotypes. alpha-Thalassaemias are not common although cases of HbH disease have been reported. Isolated examples of several Hb variants have been described, and two abnormal Hb were first found in Brazil: Hb Porto Alegre and Hb Niteroi. PMID:3898485

  16. Chlamydia trachomatis genotypes in a cross-sectional study of urogenital samples from remote Northern and Central Australia

    Science.gov (United States)

    Giffard, Philip M; Brenner, Nicole C; Tabrizi, Sepehr N; Garland, Suzanne M; Holt, Deborah C; Andersson, Patiyan; Lilliebridge, Rachael A; Tong, Steven Y C; Karimi, Mahdad; Boylan, Prudence; Ryder, Nathan; Johns, Tracy; Singh, Gurmeet

    2016-01-01

    Objectives The objective was to determine the frequency of trachoma genotypes of Chlamydia trachomatis-positive urogenital tract (UGT) specimens from remote areas of the Australian Northern Territory (NT). Setting The setting was analysis of remnants of C. trachomatis positive primarily UGT specimens obtained in the course of clinical practice. The specimens were obtained from two pathology service providers. Participants From 3356 C. trachomatis specimens collected during May 2012–April 2013, 439 were selected for genotyping, with a focus on specimens from postpubescent patients, in remote Aboriginal communities where ocular trachoma is potentially present. Primary and secondary outcome measures The primary outcome measure was the proportion of successfully genotyped UGT specimens that were trachoma genotypes. The secondary outcome measures were the distribution of genotypes, and the frequencies of different classes of specimens able to be genotyped. Results Zero of 217 successfully genotyped UGT specimens yielded trachoma genotypes (95% CI for frequency=0–0.017). For UGT specimens, the genotypes were E (41%), F (22%), D (21%) and K (7%), with J, H and G and mixed genotypes each at 1–4%. Four of the five genotyped eye swabs yielded trachoma genotype Ba, and the other genotype J. Two hundred twenty-two specimens (50.6%) were successfully genotyped. Urine specimens were less likely to be typable than vaginal swabs (p<0.0001). Conclusions Unlike in some other studies, in the remote NT, trachoma genotypes of C. trachomatis were not found circulating in UGT specimens from 2012 to 2013. Therefore, C. trachomatis genotypes in UGT specimens from young children can be informative as to whether the organism has been acquired through sexual contact. We suggest inclusion of C. trachomatis genotyping in guidelines examining the source of sexually transmitted infections in young children in areas where trachoma genotypes may continue to circulate, and continued

  17. Novel Babesia and Hepatozoon agents infecting non-volant small mammals in the Brazilian Pantanal, with the first record of the tick Ornithodoros guaporensis in Brazil.

    Science.gov (United States)

    Wolf, Rafael William; Aragona, Mônica; Muñoz-Leal, Sebastián; Pinto, Leticia Borges; Melo, Andréia Lima Tomé; Braga, Isis Assis; Dos Santos Costa, Jackeliny; Martins, Thiago Fernandes; Marcili, Arlei; de Campos Pacheco, Richard; Labruna, Marcelo B; Aguiar, Daniel Moura

    2016-04-01

    Taking into account the diversity of small terrestrial mammals of the Pantanal, the present study aimed to verify the occurrence of infection by Ehrlichia spp., Anaplasma spp., Rickettsia spp., Hepatozoon spp., Babesia spp. and parasitism by ticks in non-volant small mammals collected in the Brazilian Pantanal. Samples of blood, liver and spleen were collected from 64 captured animals, 22 marsupials and 42 rodents. Pathogen detection was performed by the use of genus-specific Polymerase Chain Reaction (PCR) assays. Ticks collected from the animals consisted of Amblyomma sculptum and Amblyomma triste nymphs, and Ornithodoros guaporensis larvae. None of the vertebrate samples (blood, liver, or spleen) yielded detectable DNA of Rickettsia spp. or Ehrlichia spp. The blood of the rodent Hylaeamys megacephalus yielded an Anaplasma sp. genotype (partial 16S rRNA gene) 99% similar to multiple Anaplasma spp. genotypes around the world. The blood of three rodents of the species Calomys callosus were positive for a novel Hepatozoon sp. agent, phylogenetically related (18S rDNA gene) to distinct Hepatozoon genotypes that have been detected in rodents from different parts of the world. One marsupial (Monodelphis domestica) and three rodents (Thrichomys pachyurus) were positive to novel piroplasmid genotypes, phylogenetically (18S rDNA gene) related to Theileria bicornis, Cytauxzoon manul, and Cytauxzoon felis. The present study provides the first molecular detection of Hepatozoon sp. and piroplasmids in small mammals in Brazil. Additionally, we expanded the distribution of O. guaporensis to Brazil, since this tick species was previously known to occur only in Bolivia. PMID:26782931

  18. Biochemical Education in Brazil.

    Science.gov (United States)

    Vella, F.

    1988-01-01

    Described are discussions held concerning the problems of biochemical education in Brazil at a meeting of the Sociedade Brazileira de Bioquimica in April 1988. Also discussed are other visits that were made to universities in Brazil. Three major recommendations to improve the state of biochemistry education in Brazil are presented. (CW)

  19. Distribution of {sup 137}Cs in three representative soils of Pernambuco state, Brazil;Distribuicao de {sup 137}Cs em tres solos representativos do estado de Pernambuco

    Energy Technology Data Exchange (ETDEWEB)

    Antunes, Patrik Diogo, E-mail: pdantunes@yahoo.com.b [Universidade Federal Rural de Pernambuco (UFRPE), Recife, PE (Brazil). Dept. de Ciencias do Solo; Sampaio, Everardo Valadares de Sa Barretto; Ferreira Junior, Antonio Luiz Goncalves; Salcedo, Ignacio Hernan, E-mail: esampaio@ufpe.b, E-mail: antonio.ferreira@ariano.nlink.com.b, E-mail: salcedo@ufpe.b [Universidade Federal Rural de Pernambuco (UFRPE), Recife, PE (Brazil). Dept. de Energia Nuclear; Galindo, Izabel Cristina Luna, E-mail: iclgalindo@uol.com.b [Universidade Federal Rural de Pernambuco (UFRPE), Recife, PE (Brazil). Dept. de Agronomia

    2010-05-15

    Contents of {sup 137}Cs have been used to quantify soil loss or accumulations, based on values of reference sites with little soil disturbance in the last decades. In Northeastern Brazil no such sites have been evaluated yet. Three areas with flat topography, native vegetation and undisturbed soil were selected in of Goiania, Araripina and Sertania counties, state of Pernambuco. Four points in each area were marked at a distance of 20 to 50 m away from each other and soil samples were collected in 3 cm depth intervals, down to 30 cm. The {sup 137}Cs activities were determined using gamma spectrometry with a hyper pure germanium detector. Average contents of {sup 137}Cs (Bq m{sup -2}) were 71.6 +- 6.3 in Goiania, 64.0 +- 13.8 in Araripina and 95.5 +- 9.8 in Sertania. Values in this range have been reported in Paraiba and Bahia, and higher ones in the Southeastern region, confirming the reduction of stocks in areas closer to the equator. The highest activities occurred in the surface layers, ranging from 0.5 to 1.6 Bq kg{sup -1}, and decreased linearly with depth until the detection limits: 18 cm in Araripina, 15 cm in Goiania, and 9 cm in Sertania. In Goiania, the activity was highest (2.06 +- 1.0 Bq kg{sup -1}) in an organic horizon above a inorganic horizon. The high activities and stock and lower depth in Sertania could be explained by the predominance of 2:1 clay minerals versus 1:1 clay minerals in the other areas. {sup 137}Cs activities were positively correlated with water and KCl pH values and negatively correlated with Al concentrations. The results confirm that, in the reference areas, {sup 137}Cs activities are highest in the surface layers, decreasing regularly down the soil profile. (author)

  20. Distribution of palaeosols and deposits in the temporal evolution of a semiarid fluvial distributary system (Bauru Group, Upper Cretaceous, SE Brazil)

    Science.gov (United States)

    Basilici, Giorgio; Bo, Patrick Führ Dal'; de Oliveira, Emerson Ferreira

    2016-07-01

    The stratigraphic and sedimentological knowledge of the Bauru Group (Upper Cretaceous, SE Brazil) is still generally insufficient and controversial. A sedimentological and palaeopedological study allowed to interpret the south-eastern portion of the Bauru Group according to the model of a fluvial distributary system. This work has two objectives: (1) to include palaeosols in the interpretation of a fluvial distributary system and (2) to give detailed information on the sedimentological and stratigraphic features of the SE portion of the Bauru Group in order to support biostratigraphical, taphonomic and palaeoecological studies. In the south-eastern portion of the Bauru Group, three genetic stratigraphic units were described and interpreted, here informally called lower, intermediate and upper units. The lower unit is constituted of muddy sandstone salt flat deposits and sandstone sheet deltas deposits and is interpreted as a basinal part of a fluvial distributary system. The intermediate unit is formed of very fine to fine-grained sandstone-filled ribbon channel and sandy sheet-shaped beds, suggesting a distal or medial portion of a fluvial distributary system. The upper unit does not match with the present models of the fluvial distributary system because mostly constituted of moderately developed, well-drained, medium- to fine-grained sandstone palaeosols, which testify pauses of sedimentation to the order of 104 years. Preserved features of sedimentary structures suggest that the parent material was formed by occasional catastrophic unconfined flows. This unit may represent the most distal portion of a fluvial distributary system generated by retrogradation of the alluvial system due to aridification of the climate. The upper unit may be interpreted also as proximal portion of fluvial distributary system if considering the coarser-grained and the well-drained palaeosols. However, the absence of channel deposits makes this interpretation unconvincing.

  1. Microsatellite Genotyping of Plasmodium vivax Isolates from Pregnant Women in Four Malaria Endemic Countries

    Science.gov (United States)

    Menegon, Michela; Bardají, Azucena; Martínez-Espinosa, Flor; Bôtto-Menezes, Camila; Ome-Kaius, Maria; Mueller, Ivo; Betuela, Inoni; Arévalo-Herrera, Myriam; Kochar, Swati; Kochar, Sanjay K.; Jaju, Puneet; Hans, Dhiraj; Chitnis, Chetan; Padilla, Norma; Castellanos, María Eugenia; Ortiz, Lucía; Sanz, Sergi; Piqueras, Mireia; Desai, Meghna; Mayor, Alfredo; del Portillo, Hernando; Menéndez, Clara; Severini, Carlo

    2016-01-01

    Plasmodium vivax is the most widely distributed human parasite and the main cause of human malaria outside the African continent. However, the knowledge about the genetic variability of P. vivax is limited when compared to the information available for P. falciparum. We present the results of a study aimed at characterizing the genetic structure of P. vivax populations obtained from pregnant women from different malaria endemic settings. Between June 2008 and October 2011 nearly 2000 pregnant women were recruited during routine antenatal care at each site and followed up until delivery. A capillary blood sample from the study participants was collected for genotyping at different time points. Seven P. vivax microsatellite markers were used for genotypic characterization on a total of 229 P. vivax isolates obtained from Brazil, Colombia, India and Papua New Guinea. In each population, the number of alleles per locus, the expected heterozygosity and the levels of multilocus linkage disequilibrium were assessed. The extent of genetic differentiation among populations was also estimated. Six microsatellite loci on 137 P. falciparum isolates from three countries were screened for comparison. The mean value of expected heterozygosity per country ranged from 0.839 to 0.874 for P. vivax and from 0.578 to 0.758 for P. falciparum. P. vivax populations were more diverse than those of P. falciparum. In some of the studied countries, the diversity of P. vivax population was very high compared to the respective level of endemicity. The level of inter-population differentiation was moderate to high in all P. vivax and P. falciparum populations studied. PMID:27011010

  2. Genotyping Rotavirus RNA from Archived Rotavirus-Positive Rapid Test Strips

    OpenAIRE

    Shulman, Lester M.; Silberstein, Ilana; Alfandari, Jacqueline; Mendelson, Ella

    2011-01-01

    Genotyping circulating rotaviruses before and after introduction of rotavirus vaccine is useful for evaluating vaccine-associated changes in genotype distribution. We determined frequency of rotavirus genotypes among 61 rotavirus-positive children hospitalized in Israel during the 2005–06 rotavirus season. Accurate molecular epidemiologic data were recovered from affinity-concentrated rotavirus immobilized in rotavirus-positive bands from air-dried, diagnostic rotavirus rapid test strips (dip...

  3. Pediatric lymphomas in Brazil

    Directory of Open Access Journals (Sweden)

    Gabriela Gualco

    2010-01-01

    Full Text Available OBJECTIVE: This study provides the clinical pathological characteristics of 1301 cases of pediatric/adolescent lymphomas in patients from different geographic regions of Brazil. METHODS: A retrospective analyses of diagnosed pediatric lymphoma cases in a 10-year period was performed. We believe that it represents the largest series of pediatric lymphomas presented from Brazil. RESULTS: Non-Hodgkin lymphomas represented 68% of the cases, including those of precursor (36% and mature (64% cell origin. Mature cell lymphomas comprised 81% of the B-cell phenotype and 19% of the T-cell phenotype. Hodgkin lymphomas represented 32% of all cases, including 87% of the classical type and 13% of nodular lymphocyte predominant type. The geographic distribution showed 38.4% of the cases in the Southeast region, 28.7% in the Northeast, 16.1% in the South, 8.8% in the North, and 8% in the Central-west region. The distribution by age groups was 15-18 years old, 33%; 11-14 years old, 26%; 6-10 years old, 24%; and 6 years old or younger, 17%. Among mature B-cell lymphomas, most of the cases were Burkitt lymphomas (65%, followed by diffuse large B-cell lymphomas (24%. In the mature T-cell group, anaplastic large cell lymphoma, ALK-positive was the most prevalent (57%, followed by peripheral T-cell lymphoma, then not otherwise specified (25%. In the group of classic Hodgkin lymphomas, the main histological subtype was nodular sclerosis (76%. Nodular lymphocyte predominance occurred more frequently than in other series. CONCLUSION: Some of the results found in this study may reflect the heterogeneous socioeconomical status and environmental factors of the Brazilian population in different regions.

  4. Familial hypercholesterolemia in Brazil.

    Science.gov (United States)

    Dos Santos, J E; Zago, M A

    2003-11-01

    The Brazilian population has heterogeneous ethnic origins and is unevenly distributed in a country of continental dimensions. In addition to the Portuguese colonists until the end of the World War II Brazil received almost 5 million immigrants who settled mainly in the south and southeast. This features of the Brazilian population have two important consequences for the inherited diseases that are associated with an ethnic background: their frequencies are different in various regions of the country reflecting a variety of ethnic origins and variable degrees of admixtures. There was no report about the molecular basis of hypercholesterolemia in Brazil until our report in 1996 that the Lebanese allele is the most common cause of the disease in our country: 10 out of the 30 families were of Arab origin, and the Lebanese allele was detected in 9 of the 10 unrelated families of Arab origin. In addition, the abnormal gene is associated with the same haplotype at the LDL-R locus in all but one family, suggesting single origin for this mutation. Recently we described seven mutations in exons 4, 7, 12 and 14 and a new mutation in exon 15. In another region of our state, eight mutation already described and seven new mutations were described and interesting no common mutations were find. We can conclude that the complex history and structure of the Brazilian population, which was formed by the contribution of a large number of ethnic components that are in a state of increasing miscegenation, is reflected in the frequency and regional distribution of the more common hereditary diseases. PMID:14615271

  5. Analysis of the distribution of radiopharmaceuticals for nuclear medicine in Brazil; Analise da distribuicao de Radiofarmacos para servicos de Medicina Nuclear no Brasil

    Energy Technology Data Exchange (ETDEWEB)

    Kuahara, Lilian T.; Correa, Eduardo L.; Potiens, Maria P.A., E-mail: lilian547@hotmail.com [Instituto de Pesquisas Energeticas e Nucleares (IPEN/CNEN-SP), Sao Paulo, SP (Brazil)

    2013-07-01

    The objective of this study was to analyze the distribution of radiopharmaceuticals produced by Instituto de Pesquisas Energeticas e Nucleares (IPEN/CNEN), as part of a project to develop a methodology for control and calibration of activimeters used by these Nuclear Medicine Services. This survey was conducted using registry data of registered customers and, with bases in such information, we analyzed the number of clinics all over the country. Considering the distribution of radiopharmaceuticals and what the most used in 2011, there was a total of 365 clinics, and this distribution as follows: Southeast with 56%, South 18%, Northeast 15%, North 4%, and Midwest with 7%. Among the various radioisotopes provided 26 were sold and most in demand are the {sup 67}Ga, {sup 131}I and IPEN-tec (technetium generator)

  6. Distribution of natural gas: introduction of the interruptible segment in Sao Paulo, Brazil; Distribuicao de gas natural canalizado: introducao do segmento interruptivel em Sao Paulo

    Energy Technology Data Exchange (ETDEWEB)

    Paula, Claudio Paiva de [Agencia Reguladora de Saneamento e Energia do Estado de Sao Paulo (ARSESP), SP (Brazil)

    2008-07-01

    The principal objective of this paper is the better knowledge and evaluation of the natural gas distribution network interruptible branch. This new service can be appropriate for thermal power generation on flexible dispatch mode, as 'take or pay' contracts surplus jobs. The paper indicates no regulatory restraints in an interruptible network implantation and one can guess that the inexistence of contracts for this service resembles only lack of conjunctural opportunities for this job applications. These difficulties appear both in the supply and distribution branches of the gas business, which prefer flat contracts. The final conclusion is interruptible contracts can be an improvement on the distribution business and certainly can accommodate a suitable demand and supply volumes in the long-term gas market balance. (author)

  7. Study of Various HCV Genotypes in Patients Managing by Referral Clinic in Yazd Province

    Directory of Open Access Journals (Sweden)

    M Pedarzadeh

    2012-02-01

    Full Text Available Introduction: Determining virus genotype is a major factor for initiation of treatment because various kinds of genotypes need different antiviral drugs. Distribution of hepatitis C genotype in the word is variable in each country or even in each province. So we need to determine distribution pattern of hepatitis C genotype in our region. This study was performed in referral clinic of Yazd province. Methods: This was a descriptive study conducted between 2007 and 2010 on patients who were observed by Yazd referral clinic (the clinic for evaluating and management of patients with high risk behaviors. Ninety two patients who had positive RIBA test for hepatitis C infection were randomly selected and entered the study. Genotyping was performed using RT-PCR method. The primer was "universal primer HCV". Prevalence of various genotypes was analyzed according to gender, addiction and co- existence of HCV-HIV infection. Personal information and laboratory results were analyzed using SPSS. Results: The most common genotype in our study was genotype 3a (65% of cases, followed by 1a (35%. Globally 83% of patients were IV drug addict. Genotype distribution in these patients was similar to others. Fifteen patients had co-infection of HCV-HIV, and 47% of them were contaminated by genotype 1a and 53% with 3a. We could not find any patient contaminated with genotypes 2 or 4. No other genotypes except 1 & 3 or mixed genotype infection could be determined in our patients. Twenty three percent of patients had negative PCR despite positive RIBA test. This indicates that self improvement from acute hepatitis C infection in IV drug addict patients is similar to other people. Conclusion: According to the results of our study, about 2/3 of patients were infected by genotype 3a. This kind of chronic hepatitis C shows a better response to treatment comparing genotype 1a (or 1b with shorter duration and lower cost drugs. But despite higher incidence of genotype 3a, we

  8. A new species of the genus Xanthomicrogaster Cameron (Hymenoptera: Braconidae: Microgastrinae) from Brazil

    NARCIS (Netherlands)

    Penteado-Dias, A.M.; Shimabukuro, P.H.F.; Achterberg, van C.

    2002-01-01

    One new Xanthomicrogaster species from Brazil is described, and X. fortipes Cameron, 1911, is redescribed and reported from Brazil and Suriname for the first time. A key to the species is presented as well as data about the geographical distribution in Brazil.

  9. Publishing, Books and Library Resources: Brazil and Argentina.

    Science.gov (United States)

    National Book Committee, Inc., New York, NY.

    This survey synthesizes and analyzes the book resources and book requirements of Brazil, with particular reference to the educational scene, in terms of local production and distribution resources and capabilities. Information on the geography, political establishment, economy, and educational system of Brazil is presented in the introductory…

  10. Evaluation of umbu-caja germplasm in the state of Bahia, Brazil

    Directory of Open Access Journals (Sweden)

    Rogério Ritzinger

    2008-01-01

    Full Text Available The umbu-caja is a tree native to the Northeastern region of Brazil, with promising perspectives of economicuse. Aiming to detect variability in the species, 43 umbu-caja genotypes were identified in 14 counties of the state of Bahia,Brazil. Fruits of these genotypes were collected for physical, chemical and physico-chemical analysis. The range of variationof all analyzed traits was large. Among genotypes, there was, however, predominance of pear-shaped to slightly pear-shapedfruits, fruit weight ranging from 15 g to 27 g, pulp/seed index around 2.0, total titratable acidity between 1.5 and 2.6%, totalsoluble solids between 9.0º and 14.0º Brix, and vitamin C content ranging from 3.6 to 16.4 mg ascorbic acid 100g pulp-1. Thepresence of seeds in genotypes ranged from 5 to 100 % of fruits without seeds.

  11. Personal genotypes are teachable moments

    OpenAIRE

    Boguski, Mark S.; Boguski, Robert M; Berman, Michele R

    2013-01-01

    There is an urgent need for effective genomics education for healthcare professionals. Recent analysis of an experimental genomics curriculum showed that medical students' examinations of their own genotypes provide a valuable learning experience. Such experiential learning has a long tradition in medical education and its application to genomics is enabled by increasingly powerful and decreasingly costly genome science and technology. Personal genotyping is an important option to consider wh...

  12. Current software for genotype imputation

    OpenAIRE

    Ellinghaus David; Schreiber Stefan; Franke Andre; Nothnagel Michael

    2009-01-01

    Abstract Genotype imputation for single nucleotide polymorphisms (SNPs) has been shown to be a powerful means to include genetic markers in exploratory genetic association studies without having to genotype them, and is becoming a standard procedure. A number of different software programs are available. In our experience, user-friendliness is often the deciding factor in the choice of software to solve a particular task. We therefore evaluated the usability of three publicly available imputa...

  13. Parvovirus B19 1A complete genome from a fatal case in Brazil

    Directory of Open Access Journals (Sweden)

    Liliane Costa Conteville

    2015-09-01

    Full Text Available Parvovirus B19 (B19V infects individuals worldwide and is associated with an ample range of pathologies and clinical manifestations. B19V is classified into three distinct genotypes, all identified in Brazil. Here, we report a complete sequence of a B19V genotype 1A that was obtained by high-throughput metagenomic sequencing. This genome provides information that will contribute to the studies on B19V epidemiology and evolution.

  14. Scenario of distributed energetic resources in the state of Sao Paulo, Brazil; O cenario dos recursos energeticos distribuidos no estado de Sao Paulo

    Energy Technology Data Exchange (ETDEWEB)

    Burani, Geraldo Francisco; Udaeta, Miguel Edgar Morales; Fujii, Ricardo Junqueira; Galvao, Luiz Claudio Ribeiro [Universidade de Sao Paulo (USP), SP (Brazil). Dept. de Engenharia de Energia e Automacao Eletricas. Grupo de Energia], e-mail: udaeta@pea.usp.br

    2004-07-01

    This paper aims to assess the viability of the use of distributed resources for power production inside the state of Sao Paulo, taking into account its different forms, advantages and drawbacks. To accomplish the assessment and using de integrated energy resources planning, the full cost accounting for energy resources was applied to each administrative region of the state, which allowed a greater focus without jeopardizing the final results. The analysis were performed considering the usage of the most prospective energy sources such as wind, solar, natural gas, hydro and biomass generation; the results show that when the different aspects of each type of distributed generation are taken into account the renewable forms of energy generation are likely to be more competitive, when compared to traditional forms of generation. (author)

  15. Flow distribution experimental study on the emergency core cooling system of the IEA-R1m - IPEN-CNEN/SP - Brazil

    International Nuclear Information System (INIS)

    This paper presents a brief description of Emergency Core Cooling System designed by the IEA-R1m Reactor and the experimental results of flow distribution over the core. Several parameters were evaluated, such as: relative position of spray header to the reactor core; type and quantity of spray nozzles; spray nozzles position on spray header; and total spray flow. The main conclusions are presented. (author)

  16. Transforming microbial genotyping: a robotic pipeline for genotyping bacterial strains.

    Directory of Open Access Journals (Sweden)

    Brian O'Farrell

    Full Text Available Microbial genotyping increasingly deals with large numbers of samples, and data are commonly evaluated by unstructured approaches, such as spread-sheets. The efficiency, reliability and throughput of genotyping would benefit from the automation of manual manipulations within the context of sophisticated data storage. We developed a medium- throughput genotyping pipeline for MultiLocus Sequence Typing (MLST of bacterial pathogens. This pipeline was implemented through a combination of four automated liquid handling systems, a Laboratory Information Management System (LIMS consisting of a variety of dedicated commercial operating systems and programs, including a Sample Management System, plus numerous Python scripts. All tubes and microwell racks were bar-coded and their locations and status were recorded in the LIMS. We also created a hierarchical set of items that could be used to represent bacterial species, their products and experiments. The LIMS allowed reliable, semi-automated, traceable bacterial genotyping from initial single colony isolation and sub-cultivation through DNA extraction and normalization to PCRs, sequencing and MLST sequence trace evaluation. We also describe robotic sequencing to facilitate cherrypicking of sequence dropouts. This pipeline is user-friendly, with a throughput of 96 strains within 10 working days at a total cost of 200,000 items were processed by two to three people. Our sophisticated automated pipeline can be implemented by a small microbiology group without extensive external support, and provides a general framework for semi-automated bacterial genotyping of large numbers of samples at low cost.

  17. Market evaluation and investment planning in natural gas industry in Brazil: development of the net distribution pipeline; Avaliacao de mercado e planejamento de investimentos na industria de gas natural no Brasil: perspectivas de crescimento da malha de gasodutos de distribuicao

    Energy Technology Data Exchange (ETDEWEB)

    Avila, Pedro L.; Pamplona, Edson O. [Universidade Federal de Itajuba (UNIFEI), MG (Brazil)

    2008-07-01

    This paper proposes to develop a real options model to decision-making investments in flexible technologies. As a result, finding a closed-form solution, derived from the partial differential equation of the value of flexibility provided by alternative fuels. However, you can present and analysis the results of a practical application using the method to solve real options problems known as binomial model. Initially presents a brief explanation on the method of discounted cash flow, its failures and changes to the real options analysis. In the sequence chart an overview of the natural gas industry on Brazil, emphasizing the need for consistent investments evaluations in the sector. The next section shows the proposed development of mathematical model for assessing the flexibility to choose, obtained by the exchange of fuel for transport of gas pipeline distribution of natural gas. The model takes as the case scenario where the flexible pipeline can carry both natural gas and hydrogen, and the evaluation of the option of exchanging input gives more value to the investment opportunity, and consider the optimum conditions where the option to be exercised. Keywords: Decision Making, Real Options; Natural Gas, Flexible Technology. (author)

  18. Identification of zoonotic genotypes of Giardia duodenalis.

    Directory of Open Access Journals (Sweden)

    Hein Sprong

    Full Text Available Giardia duodenalis, originally regarded as a commensal organism, is the etiologic agent of giardiasis, a gastrointestinal disease of humans and animals. Giardiasis causes major public and veterinary health concerns worldwide. Transmission is either direct, through the faecal-oral route, or indirect, through ingestion of contaminated water or food. Genetic characterization of G. duodenalis isolates has revealed the existence of seven groups (assemblages A to G which differ in their host distribution. Assemblages A and B are found in humans and in many other mammals, but the role of animals in the epidemiology of human infection is still unclear, despite the fact that the zoonotic potential of Giardia was recognised by the WHO some 30 years ago. Here, we performed an extensive genetic characterization of 978 human and 1440 animal isolates, which together comprise 3886 sequences from 4 genetic loci. The data were assembled into a molecular epidemiological database developed by a European network of public and veterinary health Institutions. Genotyping was performed at different levels of resolution (single and multiple loci on the same dataset. The zoonotic potential of both assemblages A and B is evident when studied at the level of assemblages, sub-assemblages, and even at each single locus. However, when genotypes are defined using a multi-locus sequence typing scheme, only 2 multi-locus genotypes (MLG of assemblage A and none of assemblage B appear to have a zoonotic potential. Surprisingly, mixtures of genotypes in individual isolates were repeatedly observed. Possible explanations are the uptake of genetically different Giardia cysts by a host, or subsequent infection of an already infected host, likely without overt symptoms, with a different Giardia species, which may cause disease. Other explanations for mixed genotypes, particularly for assemblage B, are substantial allelic sequence heterogeneity and/or genetic recombination. Although the

  19. Distribution patterns of the crab Ucides cordatus (Brachyura, Ucididae) at different spatial scales in subtropical mangroves of Paranaguá Bay (southern Brazil)

    Science.gov (United States)

    Sandrini-Neto, L.; Lana, P. C.

    2012-06-01

    Heterogeneity in the distribution of organisms occurs at a range of spatial scales, which may vary from few centimeters to hundreds of kilometers. The exclusion of small-scale variability from routine sampling designs may confound comparisons at larger scales and lead to inconsistent interpretation of data. Despite its ecological and social-economic importance, little is known about the spatial structure of the mangrove crab Ucides cordatus in the southwest Atlantic. Previous studies have commonly compared densities at relatively broad scales, relying on alleged distribution patterns (e.g., mangroves of distinct composition and structure). We have assessed variability patterns of U. cordatus in mangroves of Paranaguá Bay at four levels of spatial hierarchy (10 s km, km, 10 s m and m) using a nested ANOVA and variance components measures. The potential role of sediment parameters, pneumatophore density, and organic matter content in regulating observed patterns was assessed by multiple regression models. Densities of total and non-commercial size crabs varied mostly at 10 s m to km scales. Densities of commercial size crabs differed at the scales of 10 s m and 10 s km. Variance components indicated that small-scale variation was the most important, contributing up to 70% of the crab density variability. Multiple regression models could not explain the observed variations. Processes driving differences in crab abundance were not related to the measured variables. Small-scale patchy distribution has direct implications to current management practices of U. cordatus. Future studies should consider processes operating at smaller scales, which are responsible for a complex mosaic of patches within previously described patterns.

  20. Evolução e distribuição espacial da mortalidade por causas externas em Salvador, Bahia, Brasil Trends and spatial distribution of mortality from external causes in Salvador, Bahia State, Brazil

    Directory of Open Access Journals (Sweden)

    Eni Devay de Freitas

    2000-12-01

    Full Text Available A partir de 1980, as mortes violentas vêm se destacando como segunda principal causa de óbito no Brasil, tornando-se um importante problema de saúde pública. Este trabalho tem como objetivo descrever a evolução e a distribuição espacial das mortes violentas no espaço urbano de Salvador, uma cidade do Nordeste do Brasil, nos anos de 1988, 1991 e 1994. Trata-se de um estudo ecológico, cujos dados de mortalidade foram obtidos das Declarações de Óbito e dos arquivos do Instituto Médico Legal. Observou-se um aumento de 34,6% no número de mortes violentas entre os anos de 1988 e 1994. As maiores taxas de mortalidade ocorreram no sexo masculino nas faixas etárias de 20-29 (192,0 a 262,0/100.000 anos e de 65 anos ou mais (188,7 a 258,1/100.000. Os homicídios destacaram-se como primeira causa de morte em cerca de 75% dos distritos sanitários. Os autores discutem a necessidade de políticas públicas integradas e um conhecimento interdisciplinar para explicar as causas e enfrentar o problema da violência.Since 1980, external causes (ICD-9 E800-E999 have been ranked as the second leading causal group for mortality in Brazil, thus becoming a major public health problem. This study aimed to describe spatial distribution trends for violent deaths in the urban setting of Salvador, a city in Northeast Brazil, for the years 1988, 1991, and 1994. An ecological study was conducted, and mortality data were obtained from death certificates and the archives of the Institute for Forensic Medicine. There was an increase of 34.6% in the number of deaths from external causes between 1988 and 1994. The highest mortality rates were among men from 20 to 29 years of age (from 192.0 to 262.0/100,000 and those 65 years and over (from 188.7 to 258.1/100,000. Homicides were the leading cause of violent deaths in about 75.0% of neighborhoods. The authors discuss the need for comprehensive public policies and an interdisciplinary approach to elucidate the causes

  1. Determination of the contents and distribution characteristics of rare earth elements in Solanum lycocarpum from tropical ecosystems in Brazil by INAA

    International Nuclear Information System (INIS)

    We have determined the concentrations of eight REE elements by instrumental neutron activation analysis (INAA) (La, Ce, Nd, Sm, Eu, Tb, Yb, and Lu) in plant leaves of the species Solanum lycocarpum, a typical Brazilian 'cerrado' plant widely distributed around the country, and in the soils in which they grow. Three different ecosystems were studied. Very similar chondrite normalized patterns were observed in the soil and in the plant, presenting an enrichment of the light REE, indicating a typical absorption of these elements by this species. (author)

  2. Padrão de distribuição de cupins na região urbana de Goiânia Distribution patterns of termites on urban region of Goiânia, Goiás, Brazil

    Directory of Open Access Journals (Sweden)

    Diogo A Costa

    2009-12-01

    Full Text Available Foi realizado um levantamento das espécies de cupins em Goiânia, GO, que constituem praga e sua distribuição foi relacionada com alguns fatores ambientais. Realizou-se uma amostragem em 600 edificações de várias idades localizadas em 20 bairros, e analisaramse os principais tipos de vegetação original. Foram registradas quatro espécies de cupins. As análises mostraram que a associação entre a frequência de infestação e o tipo de vegetação original apresentou baixa significância; e entre as idades dos bairros e das edificações apresentou alta significância e constatou-se que árvores próximas não podem ser consideradas uma causa importante do padrão de distribuição dos cupins.A survey of Isoptera pest species in Goiânia, Goiás Brazil about your distribution was related with some environmental factors. A sampling in 600 buildings of different ages located in 20 districts, and the main types of original vegetation was analysed. Four termite species were registered. The analysis showed that the association between infestation frequency and the type of original vegetation has low significance; and between the buildings and districts age has high significance; and neighbouring trees were not an important cause in the distribution pattern of the termites.

  3. Epidemiological manifestations of hepatitis C virus genotypes and its association with potential risk factors among Libyan patients

    Directory of Open Access Journals (Sweden)

    Daw Mohamed A

    2010-11-01

    Full Text Available Abstract Background The information on hepatitis C virus genotypes and subtypes among Libyan population and its association with various risk factors is not known. The objectives of this study were to determine the epidemiological manifestations of HCV genotypes among Libyan patients and their association with certain potential risk factors. Methods A total of 1240 of HCV infected patients registered at Tripoli Medical Centre were studied in five years period from January 2005 to October 2009. The information were reviewed and the data were collected. A sample from each patient (785 male; 455 female was analysed for genotyping and sub-typing using specific genotyping assay. The information was correlated with the risk factors studied and the statistical data were analyzed using SPSS version 11.5. Results Off the total patients studied, four different genotypes were reported, including genotypes 1, 2, 3, and 4. Genotype4 was the commonest (35.7%, followed by genotype1 (32.6%. According to subtypes 28% were unclassified genotype 4, 14.6% were genotype 1b and some patients infected with more than one subtype (2.3% genotype 4c/d, 1% genotype 2a/c. Genotypes 1 was the commonest among males, while genotype 4 among females. According to the risk factors studied, Genotype1 and genotype 4 were found with most of the risk factors. Though they were particularly evident surgical intervention, dental procedures and blood transfusion while genotype 1 was only followed by genotype 3 mainly which mainly associated with certain risk groups such as intravenous drug abusers. Conclusion Here in we report on a detailed description of HCV genotype among Libyans. The most common genotype was type 4 followed by genotype 1, other genotypes were also reported at a low rate. The distribution of such genotypes were also variable according to gender and age. The commonly prevalent genotypes found to be attributable to the medical -related transmission of HCV, such as blood

  4. Interação genótipo-ambiente para a produção de leite em rebanhos da raça holandesa no Brasil: (I modelo de touro Genotype-environment interaction on milk production in Holstein in Brazil: (I sire model

    Directory of Open Access Journals (Sweden)

    Paulo Roberto Nogara Rorato

    1999-12-01

    Full Text Available Com o objetivo de avaliar o efeito da interação genótipo-ambiente sobre o desempenho produtivo de vacas da raça Holandesa no Brasil, foram estudados os registros de produção total de leite à primeira lactação de 14.418 vacas filhas de 324 touros e distribuídas em 181 rebanhos em diferentes estados, no período de 1981 a 1991. Os dados foram estratificados de acordo com a produção média de leite do rebanho, em nível baixo (B, médio (M e alto (A. Os componentes de (covariância foram estimados utilizando-se o método da máxima verossimilhança restrita e dois modelos de touro. Os componentes de variância de touro variaram de 116.879 a 274.871 e foram maiores nos níveis mais altos; os residuais variaram de 1.691.879 a 1.956.025, crescendo com o nível de produção dos rebanhos e os da interação variaram de 66.854 a 149.972, tendo o maior valor ocorrido nos níveis extremos de produção. Os coeficientes de herdabilidade variaram de 0,22 a 0,49 e os de correlação genética foram 0,22, 0,46 e 0,69, entre os níveis B e A, B e M e M e A, respectivamente.Records on 14.418 first lactations of Holstein cows sired by 324 bulls distributed in 181 herds in different States from 1981 to 1991, were used to study the effect of genotype-environment interaction on milk production. The data were distributed in three levels (low-B, medium-M, and high-A according to the average of the herd milk production. (Covariances components were estimated by REML using two sire models. The variance components of sire ranged from 116,879 to 274,871 were larger at the higher levels, the residuals ranged from 1,691,879 to 1,956,025, increasing with the production level of the herds and the interaction ranged from 66,854 to 149,972 with the highest value when the daughters performed at the extreme levels. The heritabilities ranged from 0.22 to 0.49 and the genetic correlations were 0.22, 0.46, and 0.69, respectivelly, among the levels low and high, low and

  5. Impacts of crab bioturbation and local pollution on sulfate reduction, Hg distribution and methylation in mangrove sediments, Rio de Janeiro, Brazil.

    Science.gov (United States)

    Correia, Raquel Rose Silva; Guimarães, Jean Remy Davée

    2016-08-15

    Mercury (Hg) and methylmercury (MeHg) are highly toxic and poorly studied in mangroves. Burrowing Uca crabs change sediment topography and biogeochemistry and thus may affect Hg distribution and MeHg formation. We studied added (203)Hg distribution, Me(203)Hg formation and sulfate reduction rates (SRR) in sediment aquariums containing Uca leptodactyla; and analyzed profiles of Me(203)Hg formation and SRR in sediment cores from two mangroves with distinct environmental impacts. MeHg formation and SRR were higher in the top (≤6cm) sediment and there was no significant difference in Hg methylation in more or less impacted mangroves. In aquariums, crab bioturbation favored Hg retention in the sediment. In the treatment without crabs, Hg volatilization and water Hg concentrations were higher. Hg methylation was higher in bioturbated aquariums but SRR were similar in both treatments. These findings suggest that bioturbating activity favors Hg retention in sediment but also promotes MeHg formation near the surface. PMID:27269386

  6. Lettuce genotype resistance to "soft rot" caused by Pectobacterium carotovorum subsp. carotovorum

    OpenAIRE

    Kátia Cilene da Silva Felix; Willams José de Oliveira; Rosa de Lima Ramos Mariano; Elineide Barbosa de Souza

    2014-01-01

    Soft rot, caused by Pectobacterium carotovorum subsp. carotovorum (Pcc), is the main bacterial disease affecting lettuce (Lactuca sativa L.) crops in Brazil and leads to significant yield losses. This study aimed to assess the reaction of lettuce genotypes to soft rot induced by a virulent isolate and the stability of the resistance to three isolates varying in virulence. Using a descriptive ordinal scale ranging from 1 to 9 a classification system was defined: class 1 = resistant (R): severi...

  7. Genetic diversity of "Pimenta Longa" genotypes (Piper spp., Piperaceae) of the Embrapa Acre germplasm collection

    OpenAIRE

    Wadt Lúcia Helena de Oliveira; Ehringhaus Christiane; Kageyama Paulo Yoshio

    2004-01-01

    The commonly known Pimenta longa is a commercially valuable natural resource found wild in Acre, Brazil. Specifically, three Piperaceae species with contested taxonomic status were studied, Piper hispidinervum, Piper aduncum, and Piper hispidum, to assesses the inter- and intra-specific genetic relationship of 49 Piper genotypes kept in the Pimenta longa germplasm collection at Embrapa Acre, using sixty six Random Amplified Polymorphic DNA (RAPD) markers. The DNA polymorphism level detected w...

  8. Genotype profiles of Mycobacterium avium subspecies paratuberculosis recovered from suspected and Crohn's disease patients in India.

    Science.gov (United States)

    Singh, A V; Singh, S V; Sohal, J S; Singh, P K

    2010-06-01

    Present study aimed to genotype Mycobacterium avium subspecies paratuberculosis (MAP) recovered from suspected and Crohn' s disease patients. A total of 32 MAP and DNA (directly from clinical samples) recovered from human origin were genotyped using IS 1311 PCR-REA. Isolates were cultured from stool, biopsies and blood clots of Crohn's disease patients, and stool samples of suspected (animal attendants, lab workers etc). Of the 32 MAP isolates belonging to 28 human beings, majority (84.3%) were genotyped as 'Bison type', while 21.7% were of 'cattle' and none was 'sheep' genotype. Study first time reports distribution of 'Cattle' and 'Bison type' 'genotypes in suspected and Crohn's patients on pilot scale in India. 'Bison type' genotype was predominant in the surveyed human population. PMID:22471168

  9. Analysis of HBV genotype distribution and its association with liver cirrhosis in Xinjiang Uygur Autonomous Region,China%新疆地区HBV基因分型构成特点及其与肝硬化的相关性分析

    Institute of Scientific and Technical Information of China (English)

    王晓忠; 王燕; 马燕; 郭峰; 庄小芳

    2014-01-01

    目的:探讨新疆地区HBV基因分型构成特点及其与肝硬化之间的关系。方法收集2011年10月至2013年6月新疆维吾尔自治区中医医院收治的慢性HBV感染者1018例。其中检测出基因型、资料完整的828例。根据实验室检查及彩超或CT结果将患者分为慢性乙型肝炎组、肝硬化组、原发性肝癌组。采用PCR法对HBV基因分型,运用列联卡方、秩和检验、多因素Logistic回归分析等方法对HBV基因型与临床病情及相关慢性肝病结局进行分析。结果828例患者中,以C型为主,占总样本的54.11%(448/828),B型占25.15%(200/828),D型占16.18%(134/828);各基因型病情程度构成差异无统计学意义(H=0.1689,P>0.05);116例肝硬化患者中基因C型占20.84%,与B型和D型相比较差异均有统计学意义(χ2值分别为25.486、20.947,P值均为0.000);乙型肝炎病程10年以上、基因C型、HBV DNA高病毒载量、ALT>ULN进入回归模型(P<0.05)。其中基因C型与肝硬化的相关度最高(OR=2.819,95%CI:1.582~5.021)。结论新疆地区HBV基因分型以C型为主,其次为B型、D型。基因C型是HBV相关肝硬化患者的独立危险因素。%Objective To investigate the distribution of hepatitis B virus (HBV)genotypes among patients in Xinjiang Uygur Autonomous Region,China,and to explore its association with liver cirrhosis.Methods HBV genotypes of 1018 hepatitis B patients were determined by PCR analysis.The relationship of HBV genotype with clinical outcomes and relevant chronic liver diseases was assessed by contingency chi-square test,Kruskal-Wallis test,and multivariate unconditional logistic regression analysis.Results Among the 828 patients whose HBV genotyping was completed in this study,type C was the major genotype and the percentage was 54.11%(448/828),25.15%(200/828) had type B,and 16.18%(134/828)had type D.Among the

  10. Biometry and diversity of Arabica coffee genotypes cultivated in a high density plant system.

    Science.gov (United States)

    Rodrigues, W N; Tomaz, M A; Ferrão, M A G; Martins, L D; Colodetti, T V; Brinate, S V B; Amaral, J F T; Sobreira, F M; Apostólico, M A

    2016-01-01

    The present study was developed to respond to the need for an increase in crop yield in the mountain region of Caparaó (southern Espírito Santo State, Brazil), an area of traditional coffee production. This study aimed to analyze the diversity and characterize the crop yield of genotypes of Coffea arabica L. with potential for cultivation in high plant density systems. In addition, it also aimed to quantify the expression of agronomic traits in this cultivation system and provide information on the genotypes with the highest cultivation potential in the studied region. The experiment followed a randomized block design with 16 genotypes, four repetitions, and six plants per experimental plot. Plant spacing was 2.00 x 0.60 m, with a total of 8333 plants per hectare, representing a high-density cultivation system. Coffee plants were cultivated until the start of their reproductive phenological cycles and were evaluated along four complete reproductive cycles. Genotypes with high crop yield and beverage quality, short canopy, and rust resistance were selected. C. arabica genotypes showed variability in almost all characteristics. It was possible to identify different responses among genotypes grown in a high plant density cultivation system. Although the chlorophyll a content was similar among genotypes, the genotypes Acauã, Araponga MG1, Sacramento MG1, Tupi, and Catuaí IAC 44 showed a higher chlorophyll b content than the other genotypes. Among these, Sacramento MG1 also showed high leafiness and growth of vegetative structures, whereas Araponga MG1, Pau-Brasil MG1, and Tupi showed high fruit production. In addition, Araponga MG1 had also a higher and more stable crop yield over the years. PMID:26909972

  11. Distribution and population structure of the fish Cyphocharax gilbert (Characiformes: Curimatidae) in the lower Paraíba do Sul River, Brazil.

    Science.gov (United States)

    Menezes, M S; Caramaschi, E P

    2007-01-01

    The distribution and population structure of Cyphocharax gilbert in four areas of the lower Paraíba do Sul River and its major tributaries (22 degrees S, 43 degrees W) were analyzed between March 1989 and February 1990. The species was common throughout the area, preferring major rivers with high turbidity and sand-mud substrates and range of length and size of specimens found varied depending on the particular characteristics of the site. A predominance of females was found in only area. Nevertheless, in all areas the bimonthly analysis showed preponderance of one of the sexes in periods before or after spawning. Males prevailed in shorter length classes and females in longer ones. There was a prevalence of young in one area that probably was used as a growth and feeding zone. v. PMID:19086403

  12. Spatial distribution of benthic macroorganisms on reef flats at Porto de Galinhas Beach (northeastern Brazil, with special focus on corals and calcified hydroids

    Directory of Open Access Journals (Sweden)

    Juliana Imenis Barradas

    2010-06-01

    Full Text Available Despite their ecological and social-economic importance, coral reefs are under constant threat and thus require proper management practices. Data on the spatial structure of these ecosystems are essential for good quality conservation projects in such areas. This study aimed to quantitatively analyze the spatial distribution of benthic macroorganisms from the reef environment of Porto de Galinhas Beach, with special focus on its corals and calcified hydroids. Reef flats of the area were surveyed by scuba diving, using 10m line transects. A high cover of macroalgae was verified, averaging 53% of the observations. Zoanthids were the second most representative group (11%. A total of 173 colonies of corals and calcified hydroids were observed and 40% of these colonies were partially or totally bleached.

  13. Losses and unpaid bills in the electricity distribution activities in Brazil; Perdas e inadimplencia na atividade de distribuicao de energia eletrica no Brasil

    Energy Technology Data Exchange (ETDEWEB)

    Araujo, Antonio Carlos Marques de

    2007-04-15

    The main purpose of this paper is to deepen the discussion about the impact of the electrical losses and the unpayment of the correspondent bills in the Brazilian market of electricity distribution, by establishing the dimension of the problem and analysing the main physical, economic and social variables which explain the rambling occurrence of the phenomenon among the companies all over the country. The study was developed by using statistical models which made possible to built explaining models. Furthermore, the paper discusses the institutional treatment given to the issue by the Brazilian federal regulatory agency, under a tariff, technical and regulatory point, and comments the actions adopted by the companies to minimize the consequent revenue impact. Finally, conclusions and some suggestions are presented regarding complementary studies related to this field of knowledge. (author)

  14. Cerebral Hemorrhage and APOE genotype

    Institute of Scientific and Technical Information of China (English)

    Sun xiaojiang; Wu ping; Zhang jing; Lu shanqing; Li bing

    2000-01-01

    Background and Purpose: Current evidence Suggests that the apolipoprotein E (APOE)ε 4 allele predisposes to cerebral amyloid angiopathy (CAA) whereas ε 2 is associated with CAA-zelated hemorrhage. In this study we examined potential clinical risk factors inpatients with cerebral hemorrhage and assessed these with respect to APOE genotype. Methoeds: 146 patinas with cerebral hemorrhage and 70 normal controls were investigated. APOE genotypes were determined with use of polymerase Chain reaction techniques.Results: The frequency of allele gene ( 0.180 ) and the percentage of the APOE ε 4 genotype in the cerebral hemorrhage group were Significantly higher as compared with the e 4 prequency ( O.O72 ) in the control group respectively ( p=O.O389 ) .Conelusious: APOE ε 4 :allele is a risk gene for cerebral hemorrhage.

  15. The microanalysis on resistance of new tomato genotypes

    Directory of Open Access Journals (Sweden)

    Tatiana Calalb

    2013-04-01

    Full Text Available Microscopic study on the leaf of the new tomato genotypes has shown that the most informative structural indicators of drought resistance of these plants are: a presence, level of development and the distribution of protective and glandulartrichomes on the leaves; b presence and occurrence of the cells with oxalate calcium sand in the leaf mesophyll. Statistical processing of the results determines that new tomato genotypes “Line 50” – ‚Prizor’ × (‚Prizor’ × Lycopersicon hirsutum and “Line 47” – ‘Friguşor’ × (Lycopersicon peruvianum × ‚Victoria’ are resistant to drought.

  16. Spatial exploration of Streptococcus pneumoniae clonal clustering in São Paulo, Brazil

    Directory of Open Access Journals (Sweden)

    Amilton Mouro

    2011-10-01

    Full Text Available OBJECTIVES: To examine the spatial distribution of Streptococcus pneumoniae and its clonal patterns collected between 2002 and 2006 in São Paulo, Brazil. METHODS: As part of an observational study in São Paulo city, Brazil, S. pneumoniae isolates routinely cultured from blood, respiratory specimens, or cerebrospinal and other profound fluids were selected. Additionally, only isolates with either penicillin (PEN intermediate (I or resistant (R status on routine antibiogram were included, in order to obtain a higher probability of clonal isolates. A single I/R S. pneumoniae isolate per patient was included and submitted to genotypic determination by pulsed field gel electrophoresis (PFGE. Minimum inhibitory concentrations (MICs were determined for the isolates by Etest® to PEN and other antimicrobials. Each isolate was geocoded in a digital map. The Kernel function and ratio methods between total isolates vs. clones were used in order to explore possible cluster formations. RESULTS: Seventy-eight (78 S. pneumoniae community isolates from two major outpatient centers in São Paulo, Brazil, were selected from the databank according to their penicillin susceptibility profile, i.e. R or I to penicillin assessed by oxacillin disc diffusion. Of these, 69 were submitted to PFGE, 65 to MIC determination, and 48 to spatial analytical procedures. Preliminary spatial analysis method showed two possible cluster formation located in southwest and southeast regions of the city. CONCLUSION: Further analyses are required for precisely determining the existence of S. pneumoniae clusters and their related risk factors. Apparently there is a specific transmission pattern of S. pneumoniae clones within certain regions and populations. GIS and spatial methods can be applied to better understand epidemiological patterns and to identify target areas for public health interventions.

  17. Would Trade Liberalization Help the Poor of Brazil?

    OpenAIRE

    Ferreira Filho, Joaquim Bento de Souza; Horridge, Mark

    2009-01-01

    This paper addresses the potential effects of world agricultural trade liberalization on poverty and regional income distribution in Brazil, using an inter-regional applied general equilibrium (AGE) and a micro-simulation model of Brazil tailored for income distribution and poverty analysis by using a detailed representation of households. The model distinguishes 10 different labor types and has 270 different household expenditure patterns. Income can originate from 41 different production ac...

  18. Molecular phylogeny of the psittacid herpesviruses causing Pacheco's disease: correlation of genotype with phenotypic expression.

    Science.gov (United States)

    Tomaszewski, Elizabeth K; Kaleta, Erhard F; Phalen, David N

    2003-10-01

    Fragments of 419 bp of the UL16 open reading frame from 73 psittacid herpesviruses (PsHVs) from the United States and Europe were sequenced. All viruses caused Pacheco's disease, and serotypes of the European isolates were known. A phylogenetic tree derived from these sequences demonstrated that the PsHVs that cause Pacheco's disease comprised four major genotypes, with each genotype including between two and four variants. With the exception of two viruses, the serotypes of the virus isolates could be predicted by the genotypes. Genotypes 1 and 4 corresponded to serotype 1 isolates, genotype 2 corresponded to serotype 2 isolates, and genotype 3 corresponded to serotype 3 isolates. The single serotype 4 virus mapped to genotype 4. DNA from a virus with a unique serotype could not be amplified with primers that amplified DNA from all other PsHVs, and its classification remains unknown. Viruses representing all four genotypes were found in both the United States and Europe, and it was therefore predicted that serotypes 1, 2, and 3 were present in the United States. Serotype 4 was represented by a single European isolate that could not be genetically distinguished from serotype 1 viruses; therefore, the presence of serotype 4 in the United States could not be predicted. Viruses of genotype 4 were found to be the most commonly associated with Pacheco's disease in macaws and conures and were least likely to be isolated in chicken embryo fibroblasts in the United States. All four genotypes caused deaths in Amazon parrots, but genotype 4 was associated with Pacheco's disease only in Amazons in Europe. Genotypes 2, 3, and 4, but not 1, were found in African grey parrots. Although parrots from the Pacific distribution represent a relatively small percentage of the total number of birds with Pacheco's disease, all four genotypes were found to cause disease in these species. PMID:14512573

  19. Emergence of Klebsiella pneumoniae-producing KPC-2 carbapenemase in Paraíba, Northeastern Brazil

    Directory of Open Access Journals (Sweden)

    Lorena C.C. Fehlberg

    2012-12-01

    Full Text Available The emergence of KPC-2 producing K. pneumoniae in hospitalized patients at the intensive care unit (ICU of a teaching hospital located in the city of João Pessoa, Paraíba, Brazil, is reported. Seven carbapenem-resistant K. pneumoniae recovered from different body sites of infection were analyzed. Most isolates showed a multidrug-resistance phenotype. Genotypic analysis demonstrated the presence of two genotypes, with the predominance of genotype A, which belongs to ST 437. These isolates also carry the encoding genes of five other betalactamases.

  20. Mutation breeding of wheat and triticale in Rio Grande do Sul State, Brazil

    International Nuclear Information System (INIS)

    A mutation breeding programme was initiated in 1985 at IPAGRO in Rio Grande do Sul State, Brazil. Seeds from several wheat (Triticum aestivum) and triticale hexaploid cultivars were treated with 60Co gamma rays and ethylmethanesulphonate (EMS) to induce mutants resistant to diseases, shorter in height, and earlier maturing. In addition, F1 seeds from crosses between triticale and wheat were irradiated with gamma rays to increase translocations and recombinations. In the M1 generation, the F1 plants were backcrossed to triticale. In 1989, the first local replicated yield trials consisted of 1072 genotypes selected from the different populations. From these yield trials, 11 cooperative trials consisting of 245 genotypes were organized in 1990 and distributed in 3 different regions in the state. From 3 wheat trials, 14 mutant lines were selected on the basis of superior yields. Among these, some lines from RS-2 are of special interest because of reduced leaf rust. Some lines from Butui were shorter and earlier than the original parent. Mutant lines derived from the irradiated hybrids of triticale x wheat were tested in 8 yield trials. From 4 of the trials, 28 lines were selected because of higher yields than that of the triticale control, TAS-1. In the other 4 trials the lines lacked uniformity, therefore, new selections were made. In comparing the selected genotypes of triticale with the control, several lines were superior in weight of hectoliter but no useful lines were identified for semidwarfness, earliness, or higher 1000-grain weight. Evidence for the success of the mutation breeding programme is not only the promising advance mutant lines but also thousands of selected plants which are still being evaluated. (author). 18 refs, 7 tabs

  1. Physiological parameters to select upland rice genotypes for tolerance to water deficit

    Directory of Open Access Journals (Sweden)

    Cleber Morais Guimarães

    2015-07-01

    Full Text Available Abstract: The objective of this work was to evaluate the feasibility of using physiological parameters for water deficit tolerance, as an auxiliary method for selection of upland rice genotypes. Two experiments - with or without water deficit - were carried out in Porangatu, in the state of Goiás, Brazil; the water deficit experiment received about half of irrigation that was applied to the well-watered experiment. Four genotypes with different tolerance levels to water stress were evaluated. The UPLRI 7, B6144F-MR-6-0-0, and IR80312-6-B-3-2-B genotypes, under water stress conditions, during the day, showed lower stomatal diffusive resistance, higher leaf water potential, and lower leaf temperature than the control. These genotypes showed the highest grain yields under water stress conditions, which were 534, 601, and 636 kg ha-1, respectively, and did not differ significantly among them. They also showed lower drought susceptibility index than the other genotypes. 'BRS Soberana' (susceptible control was totally unproductive under drought conditions. Leaf temperature is a easy-read parameter correlated to plant-water status, viable for selecting rice genotypes for water deficit tolerance.

  2. Simultaneous selection for cowpea (Vigna unguiculata L.) genotypes with adaptability and yield stability using mixed models.

    Science.gov (United States)

    Torres, F E; Teodoro, P E; Rodrigues, E V; Santos, A; Corrêa, A M; Ceccon, G

    2016-01-01

    The aim of this study was to select erect cowpea (Vigna unguiculata L.) genotypes simultaneously for high adaptability, stability, and yield grain in Mato Grosso do Sul, Brazil using mixed models. We conducted six trials of different cowpea genotypes in 2005 and 2006 in Aquidauana, Chapadão do Sul, Dourados, and Primavera do Leste. The experimental design was randomized complete blocks with four replications and 20 genotypes. Genetic parameters were estimated by restricted maximum likelihood/best linear unbiased prediction, and selection was based on the harmonic mean of the relative performance of genetic values method using three strategies: selection based on the predicted breeding value, having considered the performance mean of the genotypes in all environments (no interaction effect); the performance in each environment (with an interaction effect); and the simultaneous selection for grain yield, stability, and adaptability. The MNC99542F-5 and MNC99-537F-4 genotypes could be grown in various environments, as they exhibited high grain yield, adaptability, and stability. The average heritability of the genotypes was moderate to high and the selective accuracy was 82%, indicating an excellent potential for selection. PMID:27173301

  3. Genetic analyses, phenotypic adaptability and stability in sugarcane genotypes for commercial cultivation in Pernambuco.

    Science.gov (United States)

    Dutra Filho, J A; Junior, T C; Simões Neto, D E

    2015-01-01

    In the present study, we assessed the agro-industrial performance of 22 sugarcane genotypes adaptable to edaphoclimatic conditions in production microregions in the State of Pernambuco, Brazil, and we recommended the commercial cultivation of select genotypes. The variables analyzed were as follows: sucrose percentage in cane juice, tonnage of saccharose per hectare (TPH), sugarcane tonnage per hectare (TCH), fiber, solid soluble contents, total recoverable sugar tonnage (ATR), and total recoverable sugar tonnage per hectare (ATR t/ha). A randomized block design with 4 repeats was used. Combined variance of the experiments, genetic parameter estimates, and environment stratification were analyzed. Phenotypic adaptability and stability were analyzed using the Annicchiarico and Wricke methods and analysis of variance. Genetic gain was estimated using the classic index and sum of ranks. Genotype selection was efficient for TPH, TCH, and ATR t/ha. Genotypes presented a great potential for improvement and a similar response pattern in Litoral Norte and Mata Sul microregions for TPH and TCH and Litoral Norte and Litoral Sul microregions for ATR t/ha. Genotypes SP78-4764, RB813804, and SP79-101 showed better productivity and phenotypic adaptability and stability, according to the Wricke and Annicchiarico methods. These genotypes can be recommended for cultivation in the sugarcane belt in the State of Pernambuco. PMID:26505357

  4. Genetics against race: Science, politics and affirmative action in Brazil.

    Science.gov (United States)

    Kent, Michael; Wade, Peter

    2015-12-01

    This article analyses interrelations between genetic ancestry research, political conflict and social identity. It focuses on the debate on race-based affirmative action policies, which have been implemented in Brazil since the turn of the century. Genetic evidence of high levels of admixture in the Brazilian population has become a key element of arguments that question the validity of the category of race for the development of public policies. In response, members of Brazil's black movement have dismissed the relevance of genetics by arguing, first, that in Brazil race functions as a social--rather than a biological--category, and, second, that racial classification and discrimination in this country are based on appearance, rather than on genotype. This article highlights the importance of power relations and political interests in shaping public engagements with genetic research and their social consequences. PMID:27479998

  5. HIV genotyping among female sex workers in the State of Santa Catarina.

    Science.gov (United States)

    Schuelter-Trevisol, Fabiana; da Silva, Marcos Vinicius; Oliveira, Cristina M; Rodrigues, Rosângela

    2007-01-01

    The objective of this study was to investigate the frequency of HIV infection among female sex workers in the port area of Imbituba (State of Santa Catarina), and to identify the viral subtype and its susceptibility to antiretroviral medications. Ninety women were interviewed between December 2003 and February 2004. Six (6.7%) were HIV-positive. Genotyping for HIV, performed on four samples, detected subtype C in three of them, which is predominant in Africa and Asia, and subtype B in one of them, which is prevalent in Brazil, USA and Europe. The results suggest that the Port of Imbituba may be one of the gateways for HIV-1 subtype C to enter Brazil, and for its dissemination to the rest of the country and the Mercosul area, along the highway BR-101. This points towards the need for preventive work to reduce the introduction and dissemination of HIV subtype C in Brazil. PMID:17653456

  6. Microphytobenthic biomass on a subtropical intertidal flat of Paranaguá bay (Southern Brazil: spatio-temporal distribution and the influence of environmental conditions

    Directory of Open Access Journals (Sweden)

    Alessandra Larissa D'Oliveira Fonseca

    2013-06-01

    Full Text Available Seasonal and spatial dynamics of the microphytobenthic biomass on a subtropical intertidal sand flat (25°32'S; 48°24'W was investigated monthly from September 1995 to July 1996. Chlorophyll-a and Phaeophytin-a contents, temperature, salinity, inorganic nitrogen and phosphate pore water concentrations and sediment characteristics were assessed in the upper (HW, middle (MW and lower (LW sections of the flat. Microphytobenthic biomass content showed a conspicuous seasonal and spatial gradient. Higher chlorophyll-a contents were registered in the HW section of the tidal flat (from 11.78 µg.gsed-1 to 38.18 µg.gsed-1 decreasing towards the LW section (from 6.23 µg.gsed-1 to 18.23 µg.gsed-1. Microphytobenthic seasonality was determined mainly by turbulence of the water column, which was influenced by atmospheric events. The sediment properties and nutrient concentrations had a significant effect on the spatial and seasonal distribution of pigments on the intertidal flat.

  7. Diversity and fish distribution at Rodrigo de Freitas Lagoon, Rio de Janeiro State, Brazil, using GIS - doi: 10.4025/actascibiolsci.v36i1.18563

    Directory of Open Access Journals (Sweden)

    Luzia Alice Ferreira de Moraes

    2013-09-01

    Full Text Available Fish fauna is considered a good indicator of water quality. The Rodrigo de Freitas Lagoon is located in Rio de Janeiro city with a great scenic beauty. However, along the years, the Lagoon has been negatively impacted by human activities which can be seen in massive fish deaths and blooms of toxic algae. This study evaluated fish abundance and diversity in two historical periods, and between areas of capture. Multivariate data analyses were performed to find similar groups of fish fauna and to evaluate fish abundance and their seasonal and spatial variation. It was also used the algebraic language as a tool to combine raster layers as dissolved oxygen in surface, bathymetry and fish abundance by using rules and conditions involved in the fish zoning. The zone 2, located in the south-central area of the Lagoon, had the greatest number of species and higher values of dissolved oxygen. Mollies and menhaden had high abundance and occurred in all areas. There was a marked decrease in fish diversity and abundance in the second period. The results showed that surface dissolved oxygen and salinity were identified as important factors influencing the distribution and abundance of the main fish species at the Lagoon.

  8. Environmental factors affecting the distribution of land snails in the Atlantic Rain Forest of Ilha Grande, Angra dos Reis, RJ, Brazil.

    Science.gov (United States)

    Nunes, G K M; Santos, S B

    2012-02-01

    The distribution and abundance of terrestrial molluscs are affected by environmental factors, but data are lacking for Brazilian land snails. The aim of this study was to understand the relationship between measured environmental factors and the land-snail species composition of two hillsides covered with Atlantic Rain Forest on Ilha Grande. On each hillside, five plots located at 100 m intervals between 100 to 500 m asl were chosen. Each plot was sampled by carrying out timed searches and collecting and sorting litter samples from ten quadrats of 25 × 75 cm. A range of environmental data was measured for each of the quadrats in a plot. A Cluster Analysis was carried out for the richness and abundance data. The environmental variables were analysed using a Pearson Correlation Matrix and Discriminant Analysis. Our results show that the two mountains are similar in species richness, but species composition and abundance are different, probably reflecting observed differences in environmental conditions. The environmental factors associated with compositional variation between the two mountains were: atmospheric temperature, soil temperature, litter depth, and relative air humidity. Distinct luminosity and canopy closure conditions were related to the composition of the land-snail community of one hillside. PMID:22437388

  9. An AIDS campaign in Brazil.

    Science.gov (United States)

    Janoff, D

    1987-01-01

    The Acquired Immune Deficiency Syndrome (AIDS) distribution program in Brazil, spearheaded by the National Division of Sanitary Surveillance in Ports, Airports, and Borders, was part of the government's massive education campaign to prevent the transmission of HIV-AIDS in Brazil. Beginning in February 1987, the climate was sufficiently favorable to operate a coordinated information campaign during the Carnival celebration, and tourists arriving in the cities of Brazil for the annual Carnival celebration were handed an educational brochure in Portugese, Spanish, English, and French. Yet, beyond reaching the tourist populations, it is particularly important to reach large portions of the Brazilian population. Planners of the national AIDS campaign intend to use television, radio, and all major newspapers in their effort to cover the country. Initial television coverage is comprised of short informational messages directed at high-risk groups. There also are plans to use radio and the print media in order to reach a wider audience. It is estimated that US $6 million will be needed to adequately meet the costs of AIDS prevention and medical care, but due to extreme budget constraints, only $45,000 has been earmarked for ongoing AIDS activities at this time. PMID:12281284

  10. Spatial distribution of nests of Cornitermes cumulans (Isoptera: Termitidae in a pasture in the municipality of Rio Claro (SP, Brazil / Distribuição espacial dos ninhos de Cornitermes cumulans (Isoptera: Termitidae em uma área de pastagem no município de Rio Claro (SP, Brasil

    Directory of Open Access Journals (Sweden)

    Maria Luisa Tunes Buschini

    2006-04-01

    Full Text Available The nests of Cornitermes cumulans were detected as randomly distributed in a pasture in the municipality of Rio Claro, São Paulo, Brazil. The mean distance between each nest and its closest neighboring nest influenced their mean volume at the level (mean volume = 27.002 + 4.508 nearest neighbor distance; r= 0.155**, n = 61. Although the distribution pattern of the nests of Cornitermes cumulans was random, competition may be one of the limiting factors for the growth of the colonies which could support the hypothesis that this pattern is tending toward an aggregation, or is, at a larger scale, an aggregating pattern.

  11. Different gamma ray (60 Co) dose effects on Sorghum genotype germination

    International Nuclear Information System (INIS)

    In agriculture, applying irradiation is a very valuable way of obtaining vegetable products for human and animal consumption. Cobalt-60, one of the main sources of gamma-rays, is considered an important tool in plant breeding programs, which have the objective of promoting genetic variability of cultivars with resistance to adverse environments. In this research, the effects of different 60Co doses on germination vigor and seed germination velocity of forage sorghum genotypes were evaluated. The study was carried out at the IPA (Empresa Pernambucana de Pesquisa Agropecuaria) in Recife, Pernambuco, Brazil. The work was installed in germination boxes, following laboratory recommendations. Thus, a experiment involving three sorghum genotypes (IPA 467-4-2, IPA 02-03-01, and Sudan 4202), five 60Co doses (Zero, 150, 300, 350, and 400 Gy), was set up. The sees were irradiated before the beginning of the experiment being exposed to gamma rays from a 60Co-source (cobalt irradiator) at DEN (Nuclear Engineering Department) of the UFPE (Pernambuco Federal University), Brazil. The work also had the objective of evaluating the sorghum genotypes x 60Co dose interaction. The main results obtained showed that the sorghum genotype IPA 02-03-01 presented the greatest values of germination and vigor percentages, and seed germination velocity, when compared to the others evaluated, on 350 and 400 Gy of 60Co doses. (author)

  12. Elemental and radionuclides distribution in the production and use of phosphate fertilizers in Brazil; Distribuicao elementar e de radionuclideos na producao e uso de fertilizantes fosfatados no Brasil

    Energy Technology Data Exchange (ETDEWEB)

    Saueia, Catia Heloisa Rosignoli

    2006-07-01

    Fertilizer is considered an essential component for agriculture, because its use increases the natural soil nutrients, which are lost slow waste or erosion. The Brazilian phosphate fertilizer is obtained by wet reaction of igneous phosphate rock with concentrated sulphuric acid, giving as final product, phosphoric acid and dihydrated calcium sulphate (phosphogypsum) as by-product. Phosphoric acid is the starting material for triple superphosphate (TSP), single superphosphate (SSP), monoammonium phosphate (MAP) and diammonium phosphate (DAP). The phosphate rock used as raw material presents in its composition, radionuclides of the U and Th natural series in. During the chemical attack of the phosphate rock, this equilibrium is disrupted and the radionuclides and the elements migrate to intermediate, final products and byproducts, according to their solubility and chemical properties. While the fertilizers are commercialized, the phosphogypsum is disposed in stack piles and can cause an impact in the environment. In order to evaluate the radionuclides and the elements distribution</