WorldWideScience

Sample records for blotting southern

  1. Automated design of genomic Southern blot probes

    Directory of Open Access Journals (Sweden)

    Komiyama Noboru H

    2010-01-01

    Full Text Available Abstract Background Sothern blotting is a DNA analysis technique that has found widespread application in molecular biology. It has been used for gene discovery and mapping and has diagnostic and forensic applications, including mutation detection in patient samples and DNA fingerprinting in criminal investigations. Southern blotting has been employed as the definitive method for detecting transgene integration, and successful homologous recombination in gene targeting experiments. The technique employs a labeled DNA probe to detect a specific DNA sequence in a complex DNA sample that has been separated by restriction-digest and gel electrophoresis. Critically for the technique to succeed the probe must be unique to the target locus so as not to cross-hybridize to other endogenous DNA within the sample. Investigators routinely employ a manual approach to probe design. A genome browser is used to extract DNA sequence from the locus of interest, which is searched against the target genome using a BLAST-like tool. Ideally a single perfect match is obtained to the target, with little cross-reactivity caused by homologous DNA sequence present in the genome and/or repetitive and low-complexity elements in the candidate probe. This is a labor intensive process often requiring several attempts to find a suitable probe for laboratory testing. Results We have written an informatic pipeline to automatically design genomic Sothern blot probes that specifically attempts to optimize the resultant probe, employing a brute-force strategy of generating many candidate probes of acceptable length in the user-specified design window, searching all against the target genome, then scoring and ranking the candidates by uniqueness and repetitive DNA element content. Using these in silico measures we can automatically design probes that we predict to perform as well, or better, than our previous manual designs, while considerably reducing design time. We went on to

  2. Northern and Southern blot analysis of human RNA and DNA in autopsy material

    DEFF Research Database (Denmark)

    Larsen, S; Rygaard, K; Asnaes, S; Spang-Thomsen, M

    1992-01-01

    21-118 h postmortem. Extracted RNA and DNA were examined by Northern and Southern blot analysis using oligo-labelled human DNA probes recognizing gene transcripts of 2-5 kb. The results indicated that, in general, Northern blot analysis was feasible with the applied probes when the tissue was......Fresh biopsy material for molecular biological investigations is not obtainable from all relevant normal human tissues. We studied the feasibility of using RNA and DNA from autopsies for Northern and Southern blot analysis. Tissue samples from seven organs were obtained from 10 autopsies performed...... obtained less than two days postmortem. Histological examination showing slight or no autolysis and the presence of ribosomal bands after gel electrophoresis were both indicative parameters of RNA preservation. DNA was appropriate for Southern blotting when the tissue was obtained less than three to five...

  3. Fluorescent detection of Southern blots and PCR-based genetic typing tests

    Energy Technology Data Exchange (ETDEWEB)

    Mansfield, E.S.; Worley, J.M. [Molecular Dynamics, Inc., Sunnyvale, CA (United States); Zimmerman, P.A. [Laboratory of Parasitic Diseases, Bethesda, MD (United States)] [and others

    1994-09-01

    The Southern blot is used to study gene organization, to identify disease-causing genomic rearrangements, or for typing RFLP markers in forensic, paternity, or prenatal diagnostic testing. Fluorescence offers a much greater dynamic range and a more linear response than film used in radioactive or chemiluminescent detection of RFLPs. We therefore investigated using the Fluorimager{trademark} 575 (Molecular Dynamics, Inc.) for analyzing Southern blots. Using a single-locus probe to D2S44 (YNH24) (Promega Corp.), we detect as little as 100 ng (0.05 attomole) genomic DNA. The alkaline phosphatase-labeled probe is detected using AttoPhos (JBL Scientific), and the developed membrane is scanned with the Fluorimager. Biotinylated hybridization probes can also be developed using a streptavidin-alkaline phosphatase conjugate and AttoPhos. The instrument scan parameters can be adjusted to prevent overexposure and accompanying loss of resolution in images of blots, gels, or 96-well microplates. We have used these other sample formats in PCR-based genetic typing assays. We use FluorKit DQS (Molecular Dynamics) to accurately quantify PCR template DNA (1-500 ng) in 96-well microplates scanned using the same instrument. Mutation detection assays run include heteroduplex gels (5% polyacrylamide, 2.7 M urea), short tandem repeat (STR) markers, amplified fragment length polymorphisms (AmpFLP), competitive priming PCR, and allele-specific oligotyping. These assays are run using either 1- or 2-color labeling. We detect unlabeled PCR products, such as the AmpFLP marker D1S80 (Perkin-Elmer) by post-staining gels for 10 minutes with SYBR Green 1 (Molecular Probes) and scanning the wet gel. The Fluorimager scans a 20 x 25 cm sample within three minutes, allowing rapid optimization of fluorescent protocols and high sample throughput.

  4. Analysis of common mitochondrial DNA mutations by allele-specific oligonucleotide and Southern blot hybridization.

    Science.gov (United States)

    Tang, Sha; Halberg, Michelle C; Floyd, Kristen C; Wang, Jing

    2012-01-01

    Mitochondrial disorders are clinically and genetically heterogeneous. There are a set of recurrent point mutations in the mitochondrial DNA (mtDNA) that are responsible for common mitochondrial diseases, including MELAS (mitochondrial encephalopathy, lactic acidosis, stroke-like episodes), MERRF (myoclonic epilepsy and ragged red fibers), LHON (Leber's hereditary optic neuropathy), NARP (neuropathy, ataxia, retinitis pigmentosa), and Leigh syndrome. Most of the pathogenic mtDNA point mutations are present in the heteroplasmic state, meaning that the wild-type and mutant-containing mtDNA molecules are coexisting. Clinical heterogeneity may be due to the degree of mutant load (heteroplasmy) and distribution of heteroplasmic mutations in affected tissues. Additionally, Kearns-Sayre syndrome and Pearson syndrome are caused by large mtDNA deletions. In this chapter, we describe a multiplex PCR/allele-specific oligonucleotide (ASO) hybridization method for the screening of 13 common point mutations. This method allows the detection of low percentage of mutant heteroplasmy. In addition, a nonradioactive Southern blot hybridization protocol for the analysis of mtDNA large deletions is also described. PMID:22215554

  5. Detection of Sleeping Beauty transposition in the genome of host cells by non-radioactive Southern blot analysis.

    Science.gov (United States)

    Aravalli, Rajagopal N; Park, Chang W; Steer, Clifford J

    2016-08-26

    The Sleeping Beauty transposon (SB-Tn) system is being used widely as a DNA vector for the delivery of therapeutic transgenes, as well as a tool for the insertional mutagenesis in animal models. In order to accurately assess the insertional potential and properties related to the integration of SB it is essential to determine the copy number of SB-Tn in the host genome. Recently developed SB100X transposase has demonstrated an integration rate that was much higher than the original SB10 and that of other versions of hyperactive SB transposases, such as HSB3 or HSB17. In this study, we have constructed a series of SB vectors carrying either a DsRed or a human β-globin transgene that was encompassed by cHS4 insulator elements, and containing the SB100X transposase gene outside the SB-Tn unit within the same vector in cis configuration. These SB-Tn constructs were introduced into the K-562 erythroid cell line, and their presence in the genomes of host cells was analyzed by Southern blot analysis using non-radioactive probes. Many copies of SB-Tn insertions were detected in host cells regardless of transgene sequences or the presence of cHS4 insulator elements. Interestingly, the size difference of 2.4 kb between insulated SB and non-insulated controls did not reflect the proportional difference in copy numbers of inserted SB-Tns. We then attempted methylation-sensitive Southern blots to assess the potential influence of cHS4 insulator elements on the epigenetic modification of SB-Tn. Our results indicated that SB100X was able to integrate at multiple sites with the number of SB-Tn copies larger than 6 kb in size. In addition, the non-radioactive Southern blot protocols developed here will be useful to detect integrated SB-Tn copies in any mammalian cell type. PMID:27329815

  6. Simultaneous extraction from clinical biopsies of high-molecular-weight DNA and RNA: comparative characterization by biotinylated and 32P-labeled probes on Southern and Northern blots

    International Nuclear Information System (INIS)

    A method for efficient simultaneous extraction of high-molecular-weight DNA and RNA from solid mammalian tissues including clinical biopsies is described. It is based on the disruption and subsequent melting of deep frozen tissue in the presence of frozen phenol and nucleic acid extraction buffer; this allows for simultaneous disruption of tissue and inactivation of nucleases. The yield is about 0.7-5.8 mg of DNA and 0.5-8.1 mg of total RNA/g of tissue depending upon the tissue type; this is higher than the yield of other methods tested. Analysis of total RNA by denaturing gel electrophoresis, and of DNA and poly(A)+ RNA by Southern and Northern blot hybridization using 32P and biotinylated probes, indicated that c-Ha-ras gene and its transcripts were undegraded. Biotinylated and 32P probes had approximately the same sensitivity in detecting nucleic acids on Southern and Northern blots. This extraction procedure is simple and, when used with biotinylated probes, is rapid, inexpensive, and nonhazardous. The methodology can be modified for use with other clinical samples and cells grown in culture

  7. The AMeX method: a multipurpose tissue-processing and paraffin-embedding method. II. Extraction of spooled DNA and its application to Southern blot hybridization analysis.

    Science.gov (United States)

    Sato, Y.; Mukai, K.; Matsuno, Y.; Furuya, S.; Kagami, Y.; Miwa, M.; Shimosato, Y.

    1990-01-01

    In our previous report, we described a new fixation and paraffin-embedding method (the AMeX method) that preserves many of the antigens that are normally destroyed by routine formalin fixation. The current study was conducted to examine the preservation of high-molecular-weight DNA in tissues processed by this method. DNA was extracted from AMeX-processed tissue sections after deparaffinization by the same method as that used to extract DNA from fresh tissues. The total amounts of DNA extracted from 10 mg each in wet weight of AMeX-processed and fresh mouse liver tissues were identical. In tissues of malignant lymphoma, the total amount of spooled DNA extracted from 50 sections, each 20 microns thick, was about 8 micrograms/mm2. The electrophoretic pattern of DNA digested with restriction endonucleases on agarose gel from AMeX-processed tissue sections did not differ from that of fresh materials. Southern blot hybridization analysis also revealed that the mobility of specific DNA fragments was identical for AMeX-processed and fresh tissues. The AMeX method was thus proved to be a versatile multipurpose tissue-processing procedure, which is expected to provide important information regarding the correlation between morphology, phenotypic expression, and gene alteration. Images Figure 3 Figure 4 Figure 5A Figure 5B PMID:2407122

  8. Inverse PCR and Quantitative PCR as Alternative Methods to Southern Blotting Analysis to Assess Transgene Copy Number and Characterize the Integration Site in Transgenic Woody Plants.

    Science.gov (United States)

    Stefano, Biricolti; Patrizia, Bogani; Matteo, Cerboneschi; Massimo, Gori

    2016-06-01

    One of the major unanswered questions with respect to the commercial use of genetic transformation in woody plants is the stability of the transgene expression over several decades within the same individual. Gene expression is strongly affected by the copy number which has been integrated into the plant genome and by the local DNA features close to the integration sites. Because woody plants cannot be subjected to selfing or backcrossing to modify the transgenic allelic structure without affecting the valuable traits of the cultivar, molecular characterization of the transformation event is therefore crucial. After assessing the transgene copy number of a set of apple transgenic clones with Southern blotting, we describe two alternative methods: the first is based on inverse PCR (i-PCR) and the second on the quantitative PCR (q-PCR). The methods produced comparable results with the exception of the data regarding a high copy number clone, but while the q-PCR-based system is rapid and easily adaptable to high throughput systems, the i-PCR-based method can provide information regarding the transformation event and the characteristics of the sequences flanking the transgenic construct. PMID:26895172

  9. Problem-Solving Test: Southwestern Blotting

    Science.gov (United States)

    Szeberényi, József

    2014-01-01

    Terms to be familiar with before you start to solve the test: Southern blotting, Western blotting, restriction endonucleases, agarose gel electrophoresis, nitrocellulose filter, molecular hybridization, polyacrylamide gel electrophoresis, proto-oncogene, c-abl, Src-homology domains, tyrosine protein kinase, nuclear localization signal, cDNA,…

  10. Northern blotting analysis

    DEFF Research Database (Denmark)

    Josefsen, Knud; Nielsen, Henrik

    2011-01-01

    Northern blotting analysis is a classical method for analysis of the size and steady-state level of a specific RNA in a complex sample. In short, the RNA is size-fractionated by gel electrophoresis and transferred by blotting onto a membrane to which the RNA is covalently bound. Then, the membrane...... closing the gap to the more laborious nuclease protection experiments....

  11. Uso da técnica de Southern Blot/Hibridização associada à reação em cadeia da polimerase para aumentar a sensibilidade no diagnóstico das infecções por hemoplasmas em gatos domésticos: Use of Southern Blot/Hybridization technique associated to polymerase chain reaction to improve the sensitivity in the diagnosis of hemoplasma infections in domestic cats

    Directory of Open Access Journals (Sweden)

    Daniel B. Macieira

    2009-12-01

    Full Text Available O objetivo deste trabalho foi verificar se a técnica de Southern Blot/Hibridização (SB em associação à reação de polimerização em cadeia (PCR aumenta a sensibilidade na detecção de DNA de hemoplasmas em gatos domésticos (Felis catus. O sangue total foi coletado em tubos contendo o anticoagulante ácido etilenodiamino tetra-acético, o DNA extraído a partir de 149 animais e a PCR realizada com o uso de sequências iniciadoras espécie-específicas, para amplificar subunidade 16S do RNA ribossomal de Mycoplasma haemofelis e 'Candidatus M. haemominutum' dessas amostras. Para a hibridização, foram utilizadas sondas específicas quimicamente marcadas, e os resultados visualizados por meio da adição de substrato quimiluminescente seguida de autoradiografia. Dezoito (12,1% das 149 amostras testadas apresentaram resultado PCR-positivo para o DNA de hemoplasmas. A técnica de SB mostrou que 24/149 (16,1% amostras apresentaram resultado positivo para hemoplasmas, confirmando os 18 resultados PCR-positivos, além de revelar seis outros adicionais (p The aim of this study was to determine whether Southern Blot/Hybridization (SB associated to Polymerase Chain Reaction (PCR improves the sensitivity in the detection of hemoplasma DNA in domestic cats (Felis catus. Whole blood was collected in tubes containing the anticoagulant ethylenediamine tetra-acetic acid and DNA extracted from 149 animals. PCR was performed using species specific primers to amplify the 16S ribosomal RNA subunit of Mycoplasma haemofelis and 'Candidatus M. haemominutum' from these samples. Hybridization was performed using a 16S rDNA probes chemically labeled and the results were visualized using a chemiluminescent substrate addition followed by autoradiography. Eighteen (12.1% of the 149 tested samples had a positive PCR result for hemoplasma species DNA. SB/hybridization technique showed that 24/149 (16.1% samples were positive for hemoplasmas, confirming the 18 PCR

  12. Multiplexed Western Blotting Using Microchip Electrophoresis.

    Science.gov (United States)

    Jin, Shi; Furtaw, Michael D; Chen, Huaxian; Lamb, Don T; Ferguson, Stephen A; Arvin, Natalie E; Dawod, Mohamed; Kennedy, Robert T

    2016-07-01

    Western blotting is a commonly used protein assay that combines the selectivity of electrophoretic separation and immunoassay. The technique is limited by long time, manual operation with mediocre reproducibility, and large sample consumption, typically 10-20 μg per assay. Western blots are also usually used to measure only one protein per assay with an additional housekeeping protein for normalization. Measurement of multiple proteins is possible; however, it requires stripping membranes of antibody and then reprobing with a second antibody. Miniaturized alternatives to Western blot based on microfluidic or capillary electrophoresis have been developed that enable higher-throughput, automation, and greater mass sensitivity. In one approach, proteins are separated by electrophoresis on a microchip that is dragged along a polyvinylidene fluoride membrane so that as proteins exit the chip they are captured on the membrane for immunoassay. In this work, we improve this method to allow multiplexed protein detection. Multiple injections made from the same sample can be deposited in separate tracks so that each is probed with a different antibody. To further enhance multiplexing capability, the electrophoresis channel dimensions were optimized for resolution while keeping separation and blotting times to less than 8 min. Using a 15 μm deep × 50 μm wide × 8.6 cm long channel, it is possible to achieve baseline resolution of proteins that differ by 5% in molecular weight, e.g., ERK1 (44 kDa) from ERK2 (42 kDa). This resolution allows similar proteins detected by cross-reactive antibodies in a single track. We demonstrate detection of 11 proteins from 9 injections from a single Jurkat cell lysate sample consisting of 400 ng of total protein using this procedure. Thus, multiplexed Western blots are possible without cumbersome stripping and reprobing steps. PMID:27270033

  13. Observation on Plant Leaf Transection by Gelatin Blotting

    Institute of Scientific and Technical Information of China (English)

    TAN Dahai; LI Fuheng; WANG Xiaocen; HUANG Fushan

    2011-01-01

    Blotting was used to observe cell structures of leaf epidermis cells, and the key method of leaf transaction observation was paraffin section. The concentration, suitable solidification time, melting temperature of gelatin solution and the stain for the gelatin blotting were studied in this research. The results showed that the gelatin blotting could be used to study leaf transaction, it was benefit to make operation easily, and save time, money and so on

  14. BLOTS AND ALL: A HISTORY OF THE RORSCHACH INK BLOT TEST IN BRITAIN.

    Science.gov (United States)

    Hubbard, Katherine; Hegarty, Peter

    2016-01-01

    Despite the easily recognizable nature of the Rorschach ink blot test very little is known about the history of the test in Britain. We attend to the oft-ignored history of the Rorschach test in Britain and compare it to its history in the US. Prior to the Second World War, Rorschach testing in Britain had attracted advocates and critiques. Afterward, the British Rorschach Forum, a network with a high proportion of women, developed around the Tavistock Institute in London and The Rorschach Newsletter. In 1968, the International Rorschach Congress was held in London but soon after the group became less exclusive, and fell into decline. A comparative account of the Rorschach in Britain demonstrates how different national institutions invested in the 'projective hypothesis' according to the influence of psychoanalysis, the adoption of a nationalized health system, and the social positioning of 'others' throughout the twentieth century. In comparing and contrasting the history of the Rorschach in Britain and the US, we decentralize and particularize the history of North American Psychology. PMID:26924673

  15. HIV-1 western blot assay: What determines an indeterminate status?

    Directory of Open Access Journals (Sweden)

    Syed Iqbal

    2005-10-01

    Full Text Available Background: The Western blot assay is the gold standard for the detection of antibodies to human immunodeficiency virus type1 (HIV-1. However, indeterminate Western blot reactivity to HIV-1 proteins may occur in individuals, who may not be infected with HIV. Aim: This retrospective study was aimed to determine the diagnostic value of the interpretation criteria in relation to commercial kits for HIV -1 diagnosis. Methods and Materials: A total of 556 serum/plasma specimens collected from high-risk population attending our HIV clinic from 2000 - 2004 were tested by three different western blot kits: NEW LAV BLOT I (n=244, HIV BLOT 2.2; (n=112, Genetic Systems HIV-1 (n=237. And the results of western blot strips were analyzed using the various interpretation criteria: WHO/NACO, CDC/ ASTPHLD, ARC, FDA, CRSS and JHU. Some specimens were run on more than one kit. RT-PCR assay was performed on 5 specimens, which were indeterminate with LAV BLOT I. Results: The discrepancy in LAV BLOT I positive results were between 157(64-176(72, and indeterminate results were between 44(18 to 63(25. No such variations were observed in genetic systems. There are some HIV negative (by PCR specimens were indeterminate in LAV BLOT I revealing the kit more sensitive and less effective for diagnostic purpose. Conclusion: The genetic systems kit is superior to other kits we analyzed and its results are concordant with HIV-1 PCR results. To report, the choice of western blot commercial kit is paramount important than the use of particular interpretation criteria for the diagnosis of HIV -1.

  16. The Design of a Quantitative Western Blot Experiment

    Directory of Open Access Journals (Sweden)

    Sean C. Taylor

    2014-01-01

    Full Text Available Western blotting is a technique that has been in practice for more than three decades that began as a means of detecting a protein target in a complex sample. Although there have been significant advances in both the imaging and reagent technologies to improve sensitivity, dynamic range of detection, and the applicability of multiplexed target detection, the basic technique has remained essentially unchanged. In the past, western blotting was used simply to detect a specific target protein in a complex mixture, but now journal editors and reviewers are requesting the quantitative interpretation of western blot data in terms of fold changes in protein expression between samples. The calculations are based on the differential densitometry of the associated chemiluminescent and/or fluorescent signals from the blots and this now requires a fundamental shift in the experimental methodology, acquisition, and interpretation of the data. We have recently published an updated approach to produce quantitative densitometric data from western blots (Taylor et al., 2013 and here we summarize the complete western blot workflow with a focus on sample preparation and data analysis for quantitative western blotting.

  17. IDENTIFICATION OF IMMUNOGENS OF 'MYCOPLASMA PNEUMONIAE' BY PROTEIN BLOTTING

    Science.gov (United States)

    Proteins of Mycoplasma pneumoniae were separated by SDS-polyacrylamide gel electrophoresis and transferred to a nitrocellulose sheet by blotting. Sera obtained from infected hamsters and immunized rabbits were then incubated with the nitrocellulose strips. Proteins which are capa...

  18. HIV-1 western blot assay: What determines an indeterminate status?

    OpenAIRE

    Syed Iqbal; Balakrishnan P; Solomon Sunil; Murugavel K; Kumarasamy N; Vidya S; Martin S; Thyagarajan S; Mayer Kenneth; Solomon S

    2005-01-01

    Background: The Western blot assay is the gold standard for the detection of antibodies to human immunodeficiency virus type1 (HIV-1). However, indeterminate Western blot reactivity to HIV-1 proteins may occur in individuals, who may not be infected with HIV. Aim: This retrospective study was aimed to determine the diagnostic value of the interpretation criteria in relation to commercial kits for HIV -1 diagnosis. Methods and Materials: A total of 556 serum/plasma specimens collected from h...

  19. Western Blot of Stained Proteins from Dried Polyacrylamide Gels

    Science.gov (United States)

    Gruber, Claudia; Stan-Lotter, Helga

    1996-01-01

    Western blotting of proteins is customarily performed following their separation on polyacrylamide gels, either prior to staining (1) or, as recently reported, following staining (2). We describe here Western blotting with stained gels, which had been dried and some of which had been stored for years. This procedure permits immunological analysis of proteins, to which antisera may have become available only later, or where the application of newly developed sensitive detection methods is desired. Once rehydration of the gels is achieved, proteins can be-transferred to blotting membranes by any appropriate protocol. Proteins stained with Coomassie Blue have to be detected with a non-chromogenic method, such as the film-based enhanced chemiluminescence (ECL)2) procedure (3). Silver stained proteins, which transfer in the colorless form, may be visualized by any detection method, although, because of the usually very low amounts of proteins, detection by ECL is preferable. Blotting of stained proteins from rehydrated gels is as rapid and as quantitative as from freshly prepared gels, in contrast to blotting from wet stained gels, which requires extensive washing and results in low transfer efficiency (2). Together with a photographic record of the gel pattern, unambiguous identification of immunoreactive proteins from complex mixtures is possible. Some further applications of this work are discussed.

  20. Genetic relatedness of orbiviruses by RNA-RNA blot hybridization

    International Nuclear Information System (INIS)

    RNA-RNA blot hybridization was developed in order to identify type-specific genes among double-stranded (ds) RNA viruses, to assess the genetic relatedness of dsRNA viruses and to classify new strains. Viral dsRNA segments were electrophoresed through 10% polyacrylamide gels, transferred to membranes, and hybridized to [5'32P]-pCp labeled genomic RNA from a related strain. Hybridization was performed at 520C, 50% formamide, 5X SSC. Under these conditions heterologous RNA species must share ≥ 74% sequence homology in order to form stable dsRNA hybrids. Cognate genes of nine members of the Palyam serogroup of orbiviruses were identified and their sequence relatedness to the prototype. Palyam virus, was determined. Reciprocal blot hybridizations were performed using radiolabeled genomic RNA of all members of the Palyam serogroup. Unique and variant genes were identified by lack of cross-homology or by weak homology between segments. Since genes 2 and 6 exhibited the highest degree of sequence variability, response to the vertebrate immune system may be a major cause of sequence divergence among members of a single serogroup. Changuinola serogroup isolates were compared by dot-blot hybridization, while Colorado tick fever (CTF) serogroup isolates were compared by the RNA-RNA blot hybridization procedure described for reovirus and Palyam serogroup isolates. Preliminary blot hybridization data were also obtained on the relatedness of members of different Orbivirus serogroups

  1. Lipid A binding proteins in macrophages detected by ligand blotting

    International Nuclear Information System (INIS)

    Endotoxin (LPS) stimulates a variety of eukaryotic cells. These actions are involved in the pathogenesis of Gram-negative septicemia. The site of action of the LPS toxic moiety, lipid A (LA), is unclear. Their laboratory has previously identified a bioactive LA precursor lipid IV/sub A/, which can be enzymatically labeled with 32P/sub i/ (109 dpm/nmole) and purified (99%). They now show that this ligand binds to specific proteins immobilized on nitrocellulose (NC) from LPS-sensitive RAW 264.7 cultured macrophages. NC blots were incubated with [32P]-IV/sub A/ in a buffer containing BSA, NaCl, polyethylene glycol, and azide. Binding was assessed using autoradiography or scintillation counting. Dot blot binding of the radioligand was inhibited by excess cold IV/sub A/, LA, or ReLPS but not by phosphatidylcholine, cardiolipin, phosphatidylinositol, or phosphatidic acid. Binding was trypsin-sensitive and dependent on protein concentration. Particulate macrophage proteins were subjected to SDS-PAGE and then electroblotted onto NC. Several discrete binding proteins were observed. Identical treatment of fetal bovine serum or molecular weight standards revealed no detectable binding. By avoiding high nonspecific binding of intact membranes, this ligand blotting assay may be useful in elucidating the molecular actions of LPS

  2. Fingerprinting of Natural Product by Eastern Blotting Using Monoclonal Antibodies

    Directory of Open Access Journals (Sweden)

    Hiroyuki Tanaka

    2012-01-01

    Full Text Available We succeeded in developing the fingerprint of natural product by eastern blotting using monoclonal antibodies. After developing and separating them on a TLC plate, solasodine glycosides are oxidized by NaIO4 and reacted with a protein to give conjugates which are recognized with anti-solamargine monoclonal antibody (MAb. Anti-solamargine MAb having wide cross-reactivity can stain and detect all solasodine glycosides by fingerprint. Different sensitivity between solamargine and solasonine was observed. The detection limit was 1.6 ng of solasonine. The hydrolysed products of solamargine were determined by fingerprint of eastern blotting compared to their Rf values depending on the sugar number. Fingerprint by eastern blotting using anti-ginsenoside Rb1 MAb distinguished the formula containing ginseng prescribed in traditional Chinese medicine. By double-staining of ginsenosides it is possible to suggest that the staining color shows the pharmacological activity, such as the purple bands indicate ginsenosides having stimulation activity, and the blue color indicated compound like ginsenosides possessed the depression affect for the central nervous system (CNS, respectively.

  3. Determination of Diagnostic Antigens in Cattle Amphistomiasis Using Western Blotting

    Directory of Open Access Journals (Sweden)

    A Halajian

    2009-05-01

    Full Text Available "nBackground: Mixed infection with amphistomes seems common in native cattle of Iran. The aim of this study was to determine diagnostic antigens in cattle mixed amphistomiasis."nMethods: Specific antigens of Cotylophoron cotylophorum, Gastrothylax crumenifer and Paramphisto­mum cervi (mixed infection, the most common species, were collected from cattle was deter­mined. Adult trematodes were collected from the rumen of naturally infected cattle at meat inspec­tion. After their homogenization and centrifugation, somatic antigens were prepared and ana­lyzed by SDS-PAGE. Specific antigens were determinated by western blot with homologous and heterolo­gous sera. SDS-PAGE of whole worms extract was performed at different concentrations and subse­quent gels staining. Immunoblotting analysis using sera from cattle naturally infected with am­phistomes, Dicrocoelium dendriticum, Fasciola spp. and hydatid cyst was performed."nResults: Electrophorese analysis of somatic antigens revealed the presence of 10 and 21 protein bands at 4 µgr/ml and 8 µgr/ml with molecular weights ranging from 25-120 and 25-150 kDa, respectively. The best result was taken at 8 mg/ml concentration. Although western blot of these proteins demon­strate 5 major antigenic polypeptides ranging from 50 to 100 kDa which were recognized by serum of cat­tle naturally infected with mixed amphistomes.

  4. INMUNODIAGNOSTICO DE FASCIOLOSIS BOVINA MEDIANTE ELISA Y WESTERN BLOT

    Directory of Open Access Journals (Sweden)

    Texia Gorman

    1998-01-01

    Full Text Available Se evaluó y caracterizó la respuesta inmune humoral de bovinos naturalmente infectados con Fasciola hepatica frente a un extracto total de antígenos de excreción-secreción (E-S y a una fracción antigénica semipurificada cromatográficamente (Immunodiagnosis of bovine fasciolosis was evaluated in terms of its sensitivity and specificity by ELISA and Western blot using a crude excretory-secretory preparation (C E-S and an E-S partially purified chromatographic fraction of Fasciola hepatica (<30 kDa as antigens. Serum samples from 52 bovines with natural fasciolosis, 18 without the infection and 48 bovines with hydatid cysts, all checked by post mortem examination, were tested as well. The sensitivity and specificity obtained by ELISA using the C E-S antigens were 53% and 100%, respectively. Likewise, when using the partially purified fraction, the sensitivity of ELISA test increased to 90% with a 100% specificity. The C E-S antigens reacted specifically with sera from infected bovines exhibiting bands of 14, 22, 27-39 and 37-38 kDa in Western blots. When the partially purified fraction was tested, the 28-30 kDa band was consistently detected by sera from all infected bovines and was absent in sera from uninfected as well as in sera from those with hydatid infection. These results indicate that F. hepatica presents different antigens, among which the 28-30 kDa fraction represents polypeptides with diagnostic potential that can be further purified and applied in the immunodiagnosis of bovine fasciolosis corroborating previous results recorded in other animal species

  5. Characterization of Nora Virus Structural Proteins via Western Blot Analysis

    Directory of Open Access Journals (Sweden)

    Brad L. Ericson

    2016-01-01

    Full Text Available Nora virus is a single stranded RNA picorna-like virus with four open reading frames (ORFs. The coding potentials of the ORFs are not fully characterized, but ORF3 and ORF4 are believed to encode the capsid proteins (VP3, VP4a, VP4b, and VP4c comprising the virion. To determine the polypeptide composition of Nora virus virions, polypeptides from purified virus were compared to polypeptides detected in Nora virus infected Drosophila melanogaster. Nora virus was purified from infected flies and used to challenge mice for the production of antisera. ORF3, ORF4a, ORF4b, and ORF4c were individually cloned and expressed in E. coli; resultant recombinant proteins purified and were used to make monospecific antisera. Antisera were evaluated via Western blot against whole virus particles and Nora virus infected fly lysates. Viral purification yielded two particle types with densities of ~1.31 g/mL (empty particles and ~1.33 g/mL (complete virions. Comparison of purified virus polypeptide composition to Nora virus infected D. melanogaster lysate showed the number of proteins in infected cell lysates is less than purified virus. Our results suggest the virion is composed of 6 polypeptides, VP3, VP4a, two forms of VP4b, and two forms of VP4c. This polypeptide composition is similar to other small RNA insect viruses.

  6. Northern blot analysis to investigate the abundance of microorganisms

    International Nuclear Information System (INIS)

    areas known as hyper-variable regions which have a high degree of sequence variation. As a result of this structure, it is possible to design signature oligonucleotide probes varying in length from about 15 to 30 nucleotides that are diagnostic of microorganisms at the kingdom, domain, genus and even species level. These signature sequences can be used in a variety of applications such as PCR analysis, construction of clone libraries or direct probing of bulk rRNA. In this chapter, I provide detailed protocols for the analysis of extracted rRNA and give detailed procedures that must be followed to do northern blot analysis of bulk RNA extracted from the rumen

  7. Evaluation of an indigenous western blot kit for human immunodeficiency virus

    OpenAIRE

    Lakshmi V; Ponamgi S

    2002-01-01

    PURPOSE: The Western Blot test is considered a gold standard test for the confirmation of an ELISA and/or rapid assay screened reactive sample in the diagnosis of HIV infection, especially in the low risk population. In this study, an indigenously developed HIV W. Blot kit (J.Mitra & Co., New Delhi, India) was compared for its performance characteristics with a widely used Western Blot kit, HIV Blot 2.2 (Genelabs, Singapore). Antigens of both HIV-1 and the indicator antigen gp36 of HIV...

  8. Evaluation of an indigenous western blot kit for human immunodeficiency virus

    Directory of Open Access Journals (Sweden)

    Lakshmi V

    2002-01-01

    Full Text Available PURPOSE: The Western Blot test is considered a gold standard test for the confirmation of an ELISA and/or rapid assay screened reactive sample in the diagnosis of HIV infection, especially in the low risk population. In this study, an indigenously developed HIV W. Blot kit (J.Mitra & Co., New Delhi, India was compared for its performance characteristics with a widely used Western Blot kit, HIV Blot 2.2 (Genelabs, Singapore. Antigens of both HIV-1 and the indicator antigen gp36 of HIV-2 are included in the strips. METHODS: A panel of 150 clinical serum samples was used in the evaluation. All the sera were tested simultaneously by both the kits. RESULTS: The HIV W. Blot kit had high performance characteristics (100% sensitivity and 100% specificity, like the HIV Blot 2.2. The test procedure was easy to perform. There was clear delineation of the bands. CONCLUSIONS: The interpretation of the results on the HIV W. Blot was less prone to subjective errors. The test gave positive bands at even very high serum dilutions in the test kit. This fact indicates that HIV W. Blot probably has a potential application in early phases of infection, when the antibody concentrations are still very low.

  9. When less is more: a simple Western blotting amendment allowing data acquisition on human single fibers

    DEFF Research Database (Denmark)

    Jensen, Thomas Elbenhardt; Richter, Erik A

    2011-01-01

    This editorial discusses a simple western blotting-amendment allowing rapid data-acquisition on single fibers obtained from freeze-dried human skeletal muscle biopsies.......This editorial discusses a simple western blotting-amendment allowing rapid data-acquisition on single fibers obtained from freeze-dried human skeletal muscle biopsies....

  10. OVINE PROGRESSIVE PNEUMONIA VIRUS CAPSID IS B-CELL IMMUNODOMINANT USING WESTERN BLOT ANALYSIS: A COMPARISON OF SENSITIVITY BETWEEN WESTERN BLOT ANALYSIS AND IMMUNOPRECIPITATION

    Science.gov (United States)

    A western blot assay (WB) was developed and analyzed against the comparable standard, immunoprecipitation of 35[S] methionine/cysteine-labeled ovine progressive pneumonia virus (OPPV) proteins (IP), for its ability to detect anti-OPPV antibodies using endpoint titers. WB is 12-fold more sensitive i...

  11. SOLID-PHASE ASSAY FOR THE PHOSPHORYLATION OF PROTEINS BLOTTED ON NITROCELLULOSE MEMBRANE FILTERS

    Science.gov (United States)

    A new procedure for the phosphorylation and assay of phosphoproteins is described. Proteins are solubilized from tissue samples, separated by polyacrylamide gel electrophoresis, transferred onto nitrocellulose membrane filters and the blotted polypeptides are phosphorylated with ...

  12. Quantitative DNA slot blot analysis: inhibition of DNA binding to membranes by magnesium ions.

    OpenAIRE

    Kube, D M; Srivastava, A.

    1997-01-01

    Titers of wild-type and recombinant adeno-associated viruses are routinely determined by DNA slot blot analysis. The binding of viral DNA to nylon membranes was found to be inhibited by magnesium ions, which are critical components of the DNase I digestion carried out prior to slot blot analysis. Mg2+ions also interfered with the adsorption of plasmid DNA to nylon and nitrocellulose membranes. These observations yield practical insights into the poorly understood mechanisms by which DNA molec...

  13. Investigation of immunofluorescence cross-reactions against Trichinella spiralis by western blot (immunoblot) analysis.

    OpenAIRE

    Robert, F; Weil, B.; Kassis, N; Dupouy-Camet, J

    1996-01-01

    Immunofluorescence cross-reactions in Trichinella spiralis serodiagnosis are sometimes difficult to identify. We compared the results of an indirect immunofluorescence assay and the profiles obtained by Western blot (immunoblot) analysis for three groups of patients: 10 T. spiralis-infected patients, 10 patients with autoimmune diseases, and 7 patients with parasitic diseases other than trichinellosis. The degree of immunofluorescence cross-reaction was variable. Western blotting allowed us t...

  14. Identification of immunodiagnostic antigens for cerebrospinal filariasis in horses by western blot analysis

    Science.gov (United States)

    TAKESUE, Masataka; OSAKA, Yuki; MURANAKA, Masanori; KATAYAMA, Yoshinari; IKADAI, Hiromi

    2016-01-01

    ABSTRACT In the present study, the serum and cerebrospinal fluid of horses diagnosed with Setaria digitata cerebrospinal filariasis were analyzed by western blot. The results revealed S. digitata protein bands measuring 65, 34, 22, and 18 kDa in molecular weight. In particular, the 18 kDa band is a possible candidate for clinical immunodiagnosis on the basis of western blot findings. PMID:27073332

  15. CRITERIA OF POSITIVITY FOR Ig ANTIBODIES IN THE METHOD OF IMMUNE BLOTTING OF LYME DISEASE

    Directory of Open Access Journals (Sweden)

    V G Barskova

    2001-10-01

    Full Text Available There are currently no accepted criteria for positive Western blots in Russian patients with Lyme borreliosis. The purpose of the current study was to develop criteria for a positive IgG westem-blot to aid particularly in the diagnosis of patients with joint manifestation of the disorder. Patients: 97 with Lyme disease, 145 - control subjects. IgG antibody responses were determined to 3 species ofB.burgdorferi sensu lato by Western blotting, using blots prepared by manufacturer. The best discriminatory ability of test criteria was chained by requiring any 3 of 11 IgG bands, a definition that could be used with B. burgdorferi sensu stricto, B.garinii and B.afzelii strains. With these 3 antigen preparation, positive IgG blots were found in 0 to 18% of patients with localized erythema migrans of < 4 weeks duration, 23 to 39% of those with disseminated infection < 20 weeks duration, and in 39 to 46% of those with late arthritis/arthralgia of >6 months duration the specificity was 93 to 99%. Thus, IgG Western blotting may bring greater specificity to serologic testing in Lyme borreliosis, but the sensitivity is limited.

  16. HTLV-I/II seroindeterminate Western blot reactivity in a cohort of patients with neurological disease.

    Science.gov (United States)

    Soldan, S S; Graf, M D; Waziri, A; Flerlage, A N; Robinson, S M; Kawanishi, T; Leist, T P; Lehky, T J; Levin, M C; Jacobson, S

    1999-09-01

    The human T-cell lymphotropic virus type I (HTLV-I) is associated with a chronic, progressive neurological disease known as HTLV-I-associated myelopathy/tropical spastic paraparesis. Screening for HTLV-I involves the detection of virus-specific serum antibodies by EIA and confirmation by Western blot. HTLV-I/II seroindeterminate Western blot patterns have been described worldwide. However, the significance of this blot pattern is unclear. We identified 8 patients with neurological disease and an HTLV-I/II seroindeterminate Western blot pattern, none of whom demonstrated increased spontaneous proliferation and HTLV-I-specific cytotoxic T lymphocyte activity. However, HTLV-I tax sequence was amplified from the peripheral blood lymphocytes of 4 of them. These data suggest that patients with chronic progressive neurological disease and HTLV-I/II Western blot seroindeterminate reactivity may harbor either defective HTLV-I, novel retrovirus with partial homology to HTLV-I, or HTLV-I in low copy number. PMID:10438355

  17. Optimized semi-quantitative blot analysis in infection assays using the Stain-Free technology.

    Science.gov (United States)

    Zeitler, Anna F; Gerrer, Katrin H; Haas, Rainer; Jiménez-Soto, Luisa F

    2016-07-01

    Western blots are a commonly used method for protein detection and quantification in biological samples. Compensation of loading variations is achieved by housekeeping protein (HKP) normalization and/or total protein normalization (TPN). However, under infection conditions, HKP normalization, traditionally used in cell biology for quantification of western blots, can be problematic. Binding of microbes to target cells via specific receptors can induce signal transduction events resulting in drastic changes in the level of expression of HKPs. Additionally, samples collected after infection assays will include cellular and microbial proteins altering the analysis with TPN. Here we demonstrate under experimental infection conditions, how a reliable semi-quantitative analysis of proteins in western blots can be achieved using the Stain-Free technology. PMID:27150675

  18. A Streamlined Western Blot Exercise: An Efficient and Greener Approach in the Laboratory Classroom

    Science.gov (United States)

    Ness, Traci L.; Robinson, Rebekah L.; Mojadedi, Wais; Peavy, Lydia; Weiland, Mitch H.

    2015-01-01

    SDS-PAGE and western blotting are two commonly taught protein detection techniques in biochemistry and molecular biology laboratory classrooms. A pitfall associated with incorporating these techniques into the laboratory is the significant wait times that do not allow students to obtain timely results. The waiting associated with SDS-PAGE comes…

  19. Miniaturized fluorescent RNA dot blot method for rapid quantitation of gene expression

    Directory of Open Access Journals (Sweden)

    Yadetie Fekadu

    2004-06-01

    Full Text Available Abstract Background RNA dot blot hybridization is a commonly used technique for gene expression assays. However, membrane based RNA dot/slot blot hybridization is time consuming, requires large amounts of RNA, and is less suited for parallel assays of more than one gene at a time. Here, we describe a glass-slide based miniaturized RNA dot blot (RNA array procedure for rapid and parallel gene expression analysis using fluorescently labeled probes. Results RNA arrays were prepared by simple manual spotting of RNA onto amino-silane coated microarray glass slides, and used for two-color fluorescent hybridization with specific probes labeled with Cy3 and 18S ribosomal RNA house-keeping gene probe labeled with Cy5 fluorescent dyes. After hybridization, arrays were scanned on a fluorescent microarray scanner and images analyzed using microarray image analysis software. We demonstrate that this method gives comparable results to Northern blot analysis, and enables high throughput quantification of transcripts from nanogram quantities of total RNA in hundreds of samples. Conclusion RNA array on glass slide and detection by fluorescently labeled probes can be used for rapid and parallel gene expression analysis. The method is particularly well suited for gene expression assays that involve quantitation of many transcripts in large numbers of samples.

  20. Solid-phase assay for the phosphorylation of proteins blotted on nitrocellulose membrane filters

    International Nuclear Information System (INIS)

    A new procedure for the phosphorylation and assay of phosphoproteins is described. Proteins are solubilized from tissue samples, separated by polyacrylamide gel electrophoresis, transferred onto nitrocellulose membrane filters, and the blotted polypeptides are phyosphorylated with the catalytic subunit of cyclic AMP (adenosine 3':5'-monophosphate)-dependent protein kinase. The method was developed for the assay of dephosphosynapsin I, but it has also proven suitable for the phosphorylation of other proteins. The patterns of phosphorylation of tissue samples phosphorylated using the new method are similar to those obtained using the conventional test tube assay. Once phosphorylated, the adsorbed proteins can be digested with proteases and subjected to phosphopeptide mapping. The phosphorylated blotted proteins can also be analyzed by overlay techniques for the immunological detection of polypeptides

  1. A new analytical solution to axisymmetric Blot's consolidation of a finite soil layer

    Institute of Scientific and Technical Information of China (English)

    2008-01-01

    A new analytical method is presented to study the axisymmetric Blot's consolidation of a finite soil layer. Starting from the governing equations of axisymmetric Blot's consolidation, and based on the property of Laplace transform, the relation of basic variables for a point of a finite soil layer is established between the ground surface (z= 0) and the depth z in the Laplace and Hankel transform domains. Combined with the boundary conditions of the finite soil layer, the analytical solution of any point in the transform domain can be obtained. The actual solution in the physical domain can be obtained by inverse Laplace and Hankel transforms. A numerical analysis for the axisymmetric consolidation of a finite soil layer is carried out.

  2. Detection of Diverse and High Molecular Weight Nesprin-1 and Nesprin-2 Isoforms Using Western Blotting.

    Science.gov (United States)

    Carthew, James; Karakesisoglou, Iakowos

    2016-01-01

    Heavily utilized in cell and molecular biology, western blotting is considered a crucial technique for the detection and quantification of proteins within complex mixtures. In particular, the detection of members of the nesprin (nuclear envelope spectrin repeat protein) family has proven difficult to analyze due to their substantial isoform diversity, molecular weight variation, and the sheer size of both nesprin-1 and nesprin-2 giant protein variants (>800 kDa). Nesprin isoforms contain distinct domain signatures, perform differential cytoskeletal associations, occupy different subcellular compartments, and vary in their tissue expression profiles. This structural and functional variance highlights the need to distinguish between the full range of proteins within the nesprin protein family, allowing for greater understanding of their specific roles in cell biology and disease. Herein, we describe a western blotting protocol modified for the detection of low to high molecular weight (50-1000 kDa) nesprin proteins. PMID:27147045

  3. Western blot analysis of the human antibody response to Campylobacter jejuni cellular antigens during gastrointestinal infection.

    OpenAIRE

    Nachamkin, I; Hart, A. M.

    1985-01-01

    Western blot analysis was used to identify antigenic components of Campylobacter jejuni whole cells and outer membranes that elicit antibody responses in patients with campylobacter enteritis. Acute- and convalescent-phase sera from eight patients were analyzed for antibody activity against their homologous infecting strains and heterologous clinical isolates. Whole-cell and Sarkosyl-insoluble membrane components were separated by sodium dodecyl sulfate-polyacrylamide gel electrophoresis and ...

  4. Strategies for laboratory HIV testing: an examination of alternative approaches not requiring Western blot.

    OpenAIRE

    Sato, P. A.; Maskill, W. J.; Tamashiro, H.; Heymann, D L

    1994-01-01

    Advances in laboratory tests for antibodies to human immunodeficiency virus (HIV) have permitted the development of alternative HIV testing strategies that do not require use of the Western blot approach. Three strategies are proposed. In strategy I, sera are tested for HIV antibody using an enzyme-linked immunosorbent assay (ELISA)/rapid/simple (ERS) test; in strategy II, sera reactive in an initial ERS test are retested using a second ERS test; strategy III involves retesting with a third E...

  5. Detection and Identification of Eight Trichinella Genotypes by Reverse Line Blot Hybridization

    OpenAIRE

    Rombout, Y. B.; Bosch, S.; van der Giessen, J.W.B

    2001-01-01

    A reverse line blot (RLB) assay was developed to identify different Trichinella genotypes. The RLB assay accomplishes detection and specific identification of the different Trichinella genotypes and relies on hybridization of the amplified 5S ribosomal DNA intergenic spacer regions to specific, membrane-bound oligonucleotide probes. After one single amplification, we were able to detect and genetically identify six sibling species, i.e., T. spiralis, T. britovi, T. nativa, T. murrelli, T. nel...

  6. Evaluation of an adaptive virtual laboratory environment using Western Blotting for diagnosis of disease

    OpenAIRE

    Polly, Patsie; Marcus, Nadine; Maguire, Danni; Belinson, Zack; Gary M Velan

    2014-01-01

    Background Providing large numbers of undergraduate students in scientific disciplines with engaging, authentic laboratory experiences is important, but challenging. Virtual laboratories (vLABs) are a potential means to enable interactive learning experiences. A vLAB focusing on Western Blotting was developed and implemented in a 3rd year undergraduate Pathology course for science students to facilitate learning of technical molecular laboratory skills that are linked to development of diagno...

  7. Evaluation of western blotting for the diagnosis of enzootic bovine leukemia

    OpenAIRE

    Gonzalez E.T.; Oliva G.A.; Norimine J.; Cid de la Paz V.; Echeverría M.G.

    1999-01-01

    A western blotting (WB) procedure has been developed for detecting antibodies to bovine leukosis virus (BLV) in cattle sera. Two hundred and thirty three serum samples from naturally infected cattle with BLV virus and serial bleedings from experimentally BLV infected cows were used. An agar gel immunodiffusion test (AGID) was used for comparing with the results obtained by WB. The AGID positive sera showed a different degree of reactivity by WB test against the two most important viral antige...

  8. Inheritance of resistance to barley yellow dwarf virus detected by northern blot analysis

    International Nuclear Information System (INIS)

    Development of wheat (Triticum aestivum L.) cultivars tolerant to the barley yellow dwarf virus disease (BYD) has been limited by lack of precision in rating plants for response to infection, usually done by visual scoring of plant symptoms under field conditions. Other methodologies have been developed to study the host/pathogen relationship and to assess resistance or susceptibility. In this study northern dot blot analysis was used to determine barley yellow dwarf virus (BYDV) RNA concentrations of six wheat cultivars that differed in visual BYD symptom expression. Plants were infected with the NYPAV (PAV) isolate of BYDV in the greenhouse. At several dates after inoculation crude plant extracts were blotted on nitrocellulose and hybridized with a 32P-labeled probe of the pPA8 cDNA clone of BYDV. The distribution of PRC for the F2 population was compared to the distribution of BYD visual symptom scores for 403 F2 plants of a similar F2 population of NS 879/4 x Seri 82 under field conditions. The results were qualitatively similar, suggesting that northern dot blot analysis to measure PRC may be useful in understanding the genetics of resistance to BYD. This technique, when incorporated into breeding programs, could be important in the development of highly tolerant wheat cultivars with reduced losses to BYD

  9. Standardization of Licorice and TCM Formulations Using Eastern Blot Fingerprinting Analysis

    Directory of Open Access Journals (Sweden)

    Yukihiro Shoyama

    2013-01-01

    Full Text Available To prepare the antiglycyrrhizin (GC monoclonal antibody (MAb, GC was treated with NaIO4 resulting in aldehyde which can be combined with carrier protein. An antigen conjugate was performed by a matrix-assisted laser desorption/ionization TOF mass spectrometry to determine the hapten numbers in the conjugate. Anti-GC MAb was prepared from a hybridoma which was fixed from the spleen cells producing anti-GC MAb and the myeloma cells after immunization. The TCM and licorice extract were developed by TLC and blotted to a polyvinylidene difluoride (PVDF membrane. The membrane was treated by NaIO4 and protein, enzyme labeled secondary MAb, and finally substrate was added. Clear spot appeared on PVDF membrane identifying GC against a background containing large amount of impurities. In eastern blotting, the GC molecule was divided into two functions. The aglycone part is recognized as an epitope and the sugar moiety can be combined to membrane. The specific reactivity of sugar moiety in the GC molecule against anti-GC MAb might be modified by the NaIO4 treatment on the membrane because glycyrrhetic acid 3-O-glucuronide can be stained although the cross-reactivity is only 4.3%. Eastern blotting for GC can not only apply for the standardization of licorice and TCM, but also it can open for the other bioactive products.

  10. Selection of a Clostridium perfringens type D epsilon toxin producer via dot-blot test.

    Science.gov (United States)

    Gonçalves, Luciana A; Lobato, Zélia I P; Silva, Rodrigo O S; Salvarani, Felipe M; Pires, Prhiscylla S; Assis, Ronnie A; Lobato, Francisco C F

    2009-11-01

    Clostridium perfringens type D produces enterotoxemia, an enteric disease in ruminants, also known as pulpy kidney disease. Caused by epsilon toxin, enterotoxemia is a major exotoxin produced by this microorganism. Epsilon toxin is also the main component of vaccines against this enteric disorder. In this study, a standardized dot-blot was used to choose strains of C. perfringens type D that are producers of epsilon toxin. Clones producing epsilon toxin were chosen by limiting dilution; after three passages, lethal minimum dose titers were determined by soroneutralization test in mice. These clones produced epsilon toxin 240 times more concentrated than the original strain. The presence of the epsilon toxin gene (etx) was verified by polymerase chain reaction. All clones were positive, including those determined to be negative by dot-blot tests, suggesting that mechanisms in addition to the presence of the etx gene can influence toxin production. The dot-blot test was efficient for the selection of toxigenic colonies of C. perfringens type D and demonstrated that homogeneous populations selected from toxigenic cultures produce higher titers of epsilon toxin. PMID:19779698

  11. DIFFERENTIATION OF PSEUDOCONDYLOMA OF VULVA AND CONDYLOMA ACUMINATA BY DOT BLOT HYBRIDIZATION AND POLYMERASE CHAIN REACTION

    Institute of Scientific and Technical Information of China (English)

    刘跃华; 王家璧; 司静懿

    1996-01-01

    This study differentiated pseudocondyloma of vulva from condyloma acunainata using dot blot hybridization and polymerase chain reaction (PCR). A total of 27 cases o{ pseudocondyloma of vulva and 65 cases of condyloma acuminata were selected for the sttldy. The genital lesions were examined clinically and were biopsled. Each biopsy v-as subjected to histological examination and HPV DNA analysis by dot blot hybridization and PCR. Dot blot analysis detected HPV DNA in 19(82.6%) out of 23 cases of condyloma acuminata and 2(25%) out of 8 cases pseudocondyloma of vulvae(P<0. 05). PCR detected HPV DNA in 51(92.7%) our of 55 cases of eondyloma acuminata, compared with none in 23 cases of pseudocondylorna(P<0. 001). HPV DNA was present in the majority of condyloma acuminata specimens, HPV 6 and 11 were the predominant types. Peudocondyloma is probably not associated with HPV. PCR was the most sensitive and useful techntque for HPV DNA detection.

  12. Banding pattern indicative of echinococcosis in a commercial cysticercosis western blot

    Directory of Open Access Journals (Sweden)

    Tappe D

    2009-09-01

    Full Text Available Abstract Objective A commercial cysticercosis Western blot was evaluated for serological cross-reactivity of sera from patients with alveolar (AE and cystic echinococcosis (CE. Methods A total of 161 sera were examined, including 31 sera from AE-patients, 11 sera from CE-patients, 9 sera from patients with other parasitic diseases and 109 sera from patients with unrelated medical conditions. All AE-and CE-sera were also examined by the echinococcosis Western blot. Results More sera from patients with AE than with CE showed cross-reactivity in the form of ladder-like patterns ("Mikado aspect" and untypical bands at 6-8 kDa (71% and 77.4% versus 27.3% and 45.5%, respectively. In contrast, triplets of bands in the area above 50 kDa and between 24 and 39-42 kDa were more frequent in CE than in AE sera. The fuzzy band at 50-55 kDa typical for cysticercosis was absent in all AE and CE sera. Conclusions Atypical banding patterns in the cysticercosis Western blot should raise the suspicion of a metacestode infection different from Taenia solium, i.e. Echinococcus multilocularis or E. granulosus, especially when the Mikado aspect and an altered 6-8 kDa band is visible in the absence of a fuzzy 50-55 kDa band.

  13. Positive IgG Western Blot for Borrelia burgdorferi in Colombia

    Directory of Open Access Journals (Sweden)

    Palacios Ricardo

    1999-01-01

    Full Text Available In order to evaluate the presence of specific IgG antibodies to Borrelia burgdorferi in patients with clinical manifestations associated with Lyme borreliosis in Cali, Colombia, 20 serum samples from patients with dermatologic signs, one cerebrospinal fluid (CSF sample from a patient with chronic neurologic and arthritic manifestations, and twelve serum samples from individuals without clinical signs associated with Lyme borreliosis were analyzed by IgG Western blot. The results were interpreted following the recommendations of the Centers for Diseases Control and Prevention (CDC for IgG Western blots. Four samples fulfilled the CDC criteria: two serum specimens from patients with morphea (localized scleroderma, the CSF from the patient with neurologic and arthritic manifestations, and one of the controls. Interpretation of positive serology for Lyme disease in non-endemic countries must be cautious. However these results suggest that the putative "Lyme-like" disease may correlate with positivity on Western blots, thus raising the possibility that a spirochete genospecies distinct from B. burgdorferi sensu stricto, or a Borrelia species other than B. burgdorferi sensu lato is the causative agent. Future work will focus on a survey of the local tick and rodent population for evidence of spirochete species that could be incriminated as the etiologic agent.

  14. Use of a Western blot technique for the serodiagnosis of glanders

    Directory of Open Access Journals (Sweden)

    de Souza Marcilia MA

    2011-01-01

    Full Text Available Abstract Background The in vivo diagnosis of glanders relies on the highly sensitive complement fixation test (CFT. Frequently observed false positive results are troublesome for veterinary authorities and cause financial losses to animal owners. Consequently, there is an urgent need to develop a test with high specificity. Hence, a Western blot assay making use of a partly purified lipopolysaccaride (LPS containing antigen of three Burkholderia mallei strains was developed. The test was validated investigating a comprehensive set of positive and negative sera obtained from horses and mules from endemic and non endemic areas. Results The developed Western blot assay showed a markedly higher diagnostic specificity when compared to the prescribed CFT and therefore can be used as a confirmatory test. However, the CFT remains the test of choice for routine testing of glanders due to its high sensitivity, its feasibility using standard laboratory equipment and its worldwide distribution in diagnostic laboratories. Conclusions The CFT should be amended by the newly validated Western blot to increase the positive likelihood ratio of glanders serodiagnosis in non endemic areas or areas with low glanders prevalence. Its use for international trade of horses and mules should be implemented by the OIE.

  15. Blotting Assisted by Heating and Solvent Extraction for DESI-MS Imaging

    Science.gov (United States)

    Cabral, Elaine C.; Mirabelli, Mario F.; Perez, Consuelo J.; Ifa, Demian R.

    2013-06-01

    Imprints of potato sprout ( Solanum tuberosum L.), gingko leaves (Gingko biloba L. ) and strawberries (Fragaria x ananassa Duch. ) were successfully imaged by desorption electrospray ionization mass spectrometry (DESI-MS) on TLC plates through blotting assisted by heating and/or solvent extraction. Ion images showing the distribution of significant compounds such as glycoalkaloid toxins in potato sprout, ginkgolic acids and flavonoids in ginkgo leaves, and sugars and anthocyanidin in strawberry were obtained. Practical implications of this work include analysis of a wide range of irregular or soft materials by different imprinting conditions without requiring the addition of matrices or use of specific kinds of surfaces.

  16. ANALYSIS OF Treponema pallidum RECOMBINANT ANTIGENS FOR DIAGNOSIS OF SYPHILIS BY WESTERN BLOTTING TECHNIQUE

    OpenAIRE

    SATO Neuza Satomi; HIRATA Mário H.; HIRATA Rosário D.C.; Lia Carmen M.S. ZERBINI; Edilene P.R. SILVEIRA; MELO Carmem Silvia de; Ueda, Mirthes

    1999-01-01

    Three GST fusion recombinant antigen of Treponema pallidum, described as GST-rTp47, GST-rTp17 and GST-rTp15 were analyzed by Western blotting techniques. We have tested 53 serum samples: 25 from patients at different clinical stages of syphilis, all of them presenting anti-treponemal antibody, 25 from healthy blood donors and three from patients with sexually transmitted disease (STD) other than syphilis. Almost all samples from patients with syphilis presented a strong reactivity with GST-rT...

  17. Reverse Line Blot Assay for Direct Identification of Seven Streptococcus agalactiae Major Surface Protein Antigen Genes

    OpenAIRE

    Zhao, Zuotao; Kong, Fanrong; Gilbert, Gwendolyn L.

    2006-01-01

    We developed a multiplex PCR-based reverse line blot hybridization assay (mPCR/RLB) to detect the genes encoding members of the family of variable surface-localized proteins of Streptococcus agalactiae (group B streptococcus [GBS]), namely, Bca (Cα), Rib, Epsilon (Epsilon/Alp1/Alp5), Alp2, Alp3, and Alp4, and the immunoglobulin A binding protein, Bac (Cβ). We used the assay to identify these genes in a collection of well-characterized GBS isolates and reference strains. The results showed tha...

  18. Zinc Blotting Assay for Detection of Zinc-Binding Prolamin in Barley (Hordeum vulgare) Grain

    DEFF Research Database (Denmark)

    Uddin, Mohammad Nasir; Langkilde, Ane; Vincze, Éva

    2014-01-01

    -binding protein. However, to our knowledge so far this zinc blotting assay has never been applied to detect a prolamin fraction in barley grains. A radioactive zinc (65ZnCl2) blotting technique was optimized to detect zinc-binding prolamins, followed by development of an easy-to-follow nonradioactive colorimetric......In plants, zinc is commonly found bound to proteins. In barley (Hordeum vulgare), major storage proteins are alcohol-soluble prolamins known as hordeins, and some of them have the potential to bind or store zinc. 65Zn overlay and blotting techniques have been widely used for detecting zinc...... zinc blotting method with a zinc-sensing dye, dithizone. Hordeins were extracted from mature barley grain, separated by SDS-PAGE, blotted on a membrane, renatured, overlaid, and probed with zinc; subsequently, zinc-binding specificity of certain proteins was detected either by autoradiography or color...

  19. Sodium dodecyl sulphate-polyacrylamide gel electrophoresis and western blotting for protein antigen analysis

    International Nuclear Information System (INIS)

    Sodium dodecyl sulphate-polyacrylamide gel electrophoresis (SDS-PAGE) has now become a standard tool in most laboratories for protein analysis and purification. Several SDS-PAGE systems have been described but the most widely used one is the discontinuous buffer system introduced for disc gel electrophoresis. Western blotting or the process of transfer of the electrophoretically separated proteins onto immobilizing matrices such as nitrocellulose membrane is an extension of SDS-PAGE system and provides, on the nitrocellulose blot, an identical copy of the electrophoretic separation pattern of the proteins present in the gels. The immobilized proteins can be further reacted with an appropriate probe such as antibody for identification of its corresponding antigen. The protein antigen/antibody complex is then detected by using radioactively labelled or enzyme-linked second antibody probe. The technique is very useful for analysis and characterization of complex protein antigens using immune sera from several sources or vice versa. The protocol given presented here illustrates such a separation by which complex protein antigens of blood stages of Plasmodium vivax obtained from blood of patients with vivax malaria are fractionated by SDS-PAGE and treated with immune sera from patients with acute vivax malaria and the antigen/antibody complex formed are detected by 125I-labelled anti-human immunoglobulins. 5 refs, 2 figs

  20. Monoclonal Antibodies against Small Molecule Natural Products and Their Applications, Eastern Blotting and Knockout Extract

    Directory of Open Access Journals (Sweden)

    Yukihiro Shoyama

    2011-06-01

    Full Text Available To determine the hapten number in hapten-carrier protein conjugate matrix-assisted laser desorption/ionization (MALDI tof mass spectrometry was applied. Highly specific anti-ginsenoside Rb1 and Rg1 monoclonal antibodies (MAbs were prepared. Ginsenosides were developed on thin layer chromatography (TLC plates which were covered by a polyvinylidene difluoride (PVDF membrane resulting in blotting. The membrane was treated with NaIO4 solution to release the aldehyde group on the sugar moiety of the ginsenosides. By treatment of the membrane with a protein solution the ginsenoside-protein conjugation as a Schiff-base occurred, which can function to fix it to the PVDF membrane. A part of the ginsenoside aglycone was reacted with anti-ginsenoside Rb1 MAb, secondary MAb conjugated with enzyme and finally a substrate was added, resulting in a specific and highly sensitive staining that we named Eastern blotting. Furthermore, it makes one-step isolation of ginsenoside Rb1 possible using an immuno-affinity column conjugated with anti-ginsenoside Rb1 MAb. Furthermore, immunoaffinity concentration was carried out allowing high sensitivity analysis of lower concentrations of ginsenoside Rb1 so that several unknown bands could be structurally determined.

  1. Recombinant antigen-based immuno-slot blot method for serodiagnosis of syphilis

    Directory of Open Access Journals (Sweden)

    N.S. Sato

    2004-07-01

    Full Text Available Three recombinant antigens of Treponema pallidum Nichols strain were fused with GST, cloned and expressed in Escherichia coli, resulting in high levels of GST-rTp47 and GST-rTp17 expression, and supplementation with arginine tRNA for the AGR codon was needed to obtain GST-rTp15 overexpression. Purified fusion protein yields were 1.9, 1.7 and 5.3 mg/l of cell culture for GST-rTp47, GST-rTp17 and GST-rTp15, respectively. The identities of the antigens obtained were confirmed by automated DNA sequencing using ABI Prism 310 and peptide mapping by Finningan LC/MS. These recombinant antigens were evaluated by immuno-slot blot techniques applied to 137 serum samples from patients with a clinical and laboratory diagnosis of syphilis (61 samples, from healthy blood donors (50 samples, individuals with sexually transmitted disease other than syphilis (3 samples, and from individuals with other spirochetal diseases such as Lyme disease (20 samples and leptospirosis (3 samples. The assay had sensitivity of 95.1% (95% CI, 86.1 to 98.7% and a specificity of 94.7% (95% CI, 87.0 to 98.7%; a stronger reactivity was observed with fraction rTp17. The immunoreactivity results showed that fusion recombinant antigens based-immuno-slot blot techniques are suitable for use in diagnostic assays for syphilis.

  2. Detection of Autophagy in Caenorhabditis elegans by Western Blotting Analysis of LGG-1.

    Science.gov (United States)

    Palmisano, Nicholas J; Meléndez, Alicia

    2016-01-01

    A common way to measure the induction of autophagy in yeast and mammalian cells is to compare the amount of Atg8/LC3-I with that of Atg8-PE/LC3-II by using western blot analysis. This is because changes in the amount of LC3-II correlate closely with changes in the number of autophagosomes present in cells. Atg8/LC3 is initially synthesized as an unprocessed form, which is proteolytically processed to form Atg8/LC3-I, and then this is modified into the phosphatidylethanolamine (PE)-conjugated Atg8-PE/LC3-II form. Atg8/LC3-II is membrane bound, whereas Atg8-PE/LC3-I is cytosolic. By associating with both the inner and outer membranes of the autophagosome, Atg8-PE/LC3-II is the only autophagy reporter that is reliably associated with completed autophagosomes. In the nematode Caenorhabditis elegans, the ortholog of Atg8/LC3 is LGG-1. Here, we discuss how changes in the levels of LGG-1-II (and the paralog LGG-2) protein can, with appropriate controls, be used to monitor autophagy activity in nematodes and present a protocol for monitoring changes in the protein levels of different forms of LGG-1 by western blotting. PMID:26832685

  3. Western Blot Detection of Human Anti-Chikungunya Virus Antibody with Recombinant Envelope 2 Protein.

    Science.gov (United States)

    Yang, Zhaoshou; Lee, Jihoo; Ahn, Hye-Jin; Chong, Chom-Kyu; Dias, Ronaldo F; Nam, Ho-Woo

    2016-04-01

    Chikungunya virus (CHIKV), a tropical pathogen, has re-emerged and has massive outbreaks abruptly all over the world. Containing many dominant epitopes, the envelope E2 protein of CHIKV has been explored for the vaccination or diagnosis. In the present study, the antigenicity of a recombinant expressed intrinsically disorder domain (IUD) of E2 was tested for the detection of the antibody against CHIKV through western blot method. The gene of the IUD of E2 was inserted into 2 different vectors and expressed as recombinant GST-E2 and recombinant MBP-E2 fusion protein, respectively. Two kinds of fusion proteins were tested with 30 CHIKV patient sera and 30 normal sera, respectively. Both proteins were detected by 25 patients sera (83.3%) and 1 normal serum (3.3%). This test showed a relatively high sensitivity and very high specificity of the recombinant E2 proteins to be used as diagnostic antigens against CHIKV infection. PMID:27180586

  4. Electrospun nitrocellulose and nylon: Design and fabrication of novel high performance platforms for protein blotting applications

    Directory of Open Access Journals (Sweden)

    Bowlin Gary L

    2007-10-01

    Full Text Available Abstract Background Electrospinning is a non-mechanical processing strategy that can be used to process a variety of native and synthetic polymers into highly porous materials composed of nano-scale to micron-scale diameter fibers. By nature, electrospun materials exhibit an extensive surface area and highly interconnected pore spaces. In this study we adopted a biological engineering approach to ask how the specific unique advantages of the electrospinning process might be exploited to produce a new class of research/diagnostic tools. Methods The electrospinning properties of nitrocellulose, charged nylon and blends of these materials are characterized. Results Nitrocellulose electrospun from a starting concentration of Conclusion The flexibility afforded by electrospinning process makes it possible to tailor blotting membranes to specific applications. Electrospinning has a variety of potential applications in the clinical diagnostic field of use.

  5. Analysis of immunostaining and western blotting of endothelin 1 and its receptors in mitral stenosis

    Directory of Open Access Journals (Sweden)

    Sydney Correia Leão

    2015-04-01

    Full Text Available AbstractIntroduction:Rheumatic Fever represents a serious public health problem in developing countries, with thousands of new cases each year. It is an autoimmune disease, which occurs in response to infection by streptococcus A.Objective:The aim of this study was to evaluate the immunolabeling and protein expression for endothelin-1 and 3 (ET-1, ET-3 and its receptors (ETA, ETB in rheumatic mitral valves.Methods:Immunohistochemistry was used to identify ET-1/ET-3 and ETA/ETB receptors in rheumatic and control mitral valves. Quantitative analysis of immunostaining for ET-1/ET-3 and ETA/ETB receptors was performed. In addition, western blot analysis was carried out to assess protein levels in tissue samples.Results:ET-1 and ETA receptor immunostaining predominated in stenotic valves, mainly associated with fibrotic regions, inflammatory areas and neovascularization. Quantitative analysis showed that the average area with positive expression of ET-1 was 18.21±14.96%. For ETA and ETB, the mean expressed areas were respectively 15.06±13.13% and 9.20±11.09%. ET-3 did not have a significant expression. The correlation between the expression of both endothelin receptors were strongly positive (R=0.74, P=0.02, but the correlation between ET-1 and its receptor were negative for both ETA (R=-0.37, P=0.25, and ETB (R=-0.14, P=0.39. This data was supported by western blot analysis.Conclusion:The strong correlation between ET-1 and its receptors suggests that both play a role in the pathophysiology of rheumatic mitral valve stenosis and may potentially act as biomarkers of this disease.

  6. Total protein analysis as a reliable loading control for quantitative fluorescent Western blotting.

    Directory of Open Access Journals (Sweden)

    Samantha L Eaton

    Full Text Available Western blotting has been a key technique for determining the relative expression of proteins within complex biological samples since the first publications in 1979. Recent developments in sensitive fluorescent labels, with truly quantifiable linear ranges and greater limits of detection, have allowed biologists to probe tissue specific pathways and processes with higher resolution than ever before. However, the application of quantitative Western blotting (QWB to a range of healthy tissues and those from degenerative models has highlighted a problem with significant consequences for quantitative protein analysis: how can researchers conduct comparative expression analyses when many of the commonly used reference proteins (e.g. loading controls are differentially expressed? Here we demonstrate that common controls, including actin and tubulin, are differentially expressed in tissues from a wide range of animal models of neurodegeneration. We highlight the prevalence of such alterations through examination of published "-omics" data, and demonstrate similar responses in sensitive QWB experiments. For example, QWB analysis of spinal cord from a murine model of Spinal Muscular Atrophy using an Odyssey scanner revealed that beta-actin expression was decreased by 19.3±2% compared to healthy littermate controls. Thus, normalising QWB data to β-actin in these circumstances could result in 'skewing' of all data by ∼20%. We further demonstrate that differential expression of commonly used loading controls was not restricted to the nervous system, but was also detectable across multiple tissues, including bone, fat and internal organs. Moreover, expression of these "control" proteins was not consistent between different portions of the same tissue, highlighting the importance of careful and consistent tissue sampling for QWB experiments. Finally, having illustrated the problem of selecting appropriate single protein loading controls, we demonstrate

  7. Development of an improved method for quantitative analysis of skin blotting: Increasing reliability and applicability for skin assessment

    OpenAIRE

    Ogai, Kazuhiro; Matsumoto, Masaru; Minematsu, T; Kitamura, Keiichiro; Kobayashi, M.; Sugama, Junko; Sanada, Hiromi

    2015-01-01

    Objective A novel skin assessment tool named 'skin blotting' has been recently developed, which can easily predict the skin status to avoid its deterioration. The aim of this study was to propose a normalization method for skin blotting to compensate for individual differences that can hamper the quantitative comparisons and clinical applications. Methods To normalize individual differences, we utilized a total protein as a 'normalizer' with calibration curves. For evaluation, we performed a ...

  8. Application of Western Blotting for the Immunodiagnosis of Fasciola hepatica in Cattle Using Excretory/Secretory Antigens

    OpenAIRE

    SARIMEHMETOĞLU, H. Oğuz

    2002-01-01

    In this study, protein bands of excretory/secretory antigens of Fasciola hepatica were determined using SDS-PAGE and Western blotting. Blood and faecal samples were obtained from cattle brought to Kazan slaughterhouse. After examining the organs and faecal samples of these cattle for Fasciola hepatica and other helminths, serum samples were divided into two groups as positive (10 cattle) and negative (5 cattle) for F. hepatica. The sera of these two groups were tested using Western blotting. ...

  9. [Evaluation of IHA, ELISA and Western Blot tests in diagnosis of pulmonary cystic hidatidosis].

    Science.gov (United States)

    Akisu, Ciler; Bayram Delibaş, Songül; Yuncu, Gökhan; Aksoy, Umit; Ozkoç, Soykan; Biçmen, Can; Sevinç, Serpil; Yaldiz, Sadik

    2005-01-01

    Pulmonary cystic hidatidosis caused by the larval stages of Echinococcus granulosus is a common parasitic disease in Turkey and throughout the world. In this study IHA, ELISA and Western Blot (WB) tests were performed with a panel of 59 sera from 31 surgically confirmed pulmonary cystic hidatidosis patients, 18 patients with pulmonary disease other than cystic hidatidosis and 10 healthy individual. The overall sensitivity of the IHA, ELISA and WB tests used for the serodiagnosis of pulmonary cystic hidatidosis were found as 96.7%, 87.1%, 100% and the specificities were 82.2%, 89.2% and %85.7, respectively. Using the WB test 8-12 kDa, 24 kDa and 124 kDa bands were detected as valuable for surgically confirmed patients' sera. One or more of these bands were also detected in sera of four patients with other pulmonary diseases false-positively. In conclusion conventional serologic test like IHA and ELISA is valuable in diagnosis of pulmonary cystic hidatidosis, also evaluation of some specific bands in WB would contribute to the diagnosis. PMID:16100652

  10. Identification of Yeast V-ATPase Mutants by Western Blots Analysis of Whole Cell Lysates

    Science.gov (United States)

    Parra-Belky, Karlett

    2002-11-01

    A biochemistry laboratory was designed for an undergraduate course to help students better understand the link between molecular engineering and biochemistry. Students identified unknown yeast strains with high specificity using SDS-PAGE and Western blot analysis of whole cell lysates. This problem-solving exercise is a common application of biochemistry in biotechnology research. Three different strains were used: a wild-type and two mutants for the proton pump vacuolar ATPase (V-ATPase). V-ATPases are multisubunit enzymes and the mutants used were deletion mutants; each lacked one structural gene of the complex. After three, three-hour labs, mutant strains were easily identified by the students and distinguished from wild-type cells analyzing the pattern of SDS-PAGE distribution of proteins. Identifying different subunits of one multimeric protein allowed for discussion of the structure and function of this metabolic enzyme, which captured the interest of the students. The experiment can be adapted to other multimeric protein complexes and shows improvement of the described methodology over previous reports, perhaps because the problem and its solution are representative of the type of techniques currently used in research labs.

  11. NORTHERN BLOT ANALYSIS OF nm23 GENE EXPRESSION IN HUMAN LUNG CANCER

    Institute of Scientific and Technical Information of China (English)

    LIU Lun-xu; ZHOU Qing-hua; SHI Ying-kang; QIN Yang; SUN Zhi-lin; SUN Ze-fang

    1999-01-01

    Objective: To investigate the role of nm23 gene expression in human lung cancer. Methods: Forty human lung cancer tissues and 19 non-cancer pulmonary tissues were studied for their nm23-H1 and nm23-H2 mRNA expression with non-radioactive Northern blot hybridization. The correlation of nm23 mRNA expression with clinical features of lung cancer was analyzed. Results: The mRNA expression of nm23-H2 gene in poorly differentiated squamous cell carcinoma was significantly decreased compared to that in moderate-high differentiated squamous cell carcinoma. The mRNA expression of nm23-H1 and nm23-H2 gene in small cell lung cancer was significantly decreased compared to that in squamous cell carcinoma. No significant difference in nm23 mRNA expression was observed between lung cancer with and without lymph node metastasis, nor was there significant difference between tumor stage. Conclusion: The mRNA expression of nm23 gene is correlated with the degree of differentiation of lung cancer, but there is no evidence of metastasis suppression effect by nm23 gene.

  12. Evaluation of an enzyme-linked immunoelectrotransfer blot test for the confirmatory serodiagnosis of human toxocariasis

    Directory of Open Access Journals (Sweden)

    William H Roldán

    2009-05-01

    Full Text Available To improve the serodiagnosis of human toxocariasis, a sensitive and specific enzyme-linked immunoelectrotransfer blot (EITB-IgG test was developed and evaluated using Toxocara canislarvae excretory-secretory antigens for detecting anti-Toxocara IgG antibodies. The EITB-IgG profile of toxocariasis was characterized by comparing 27 sera from patients with toxocariasis, 110 sera from healthy subjects and 186 sera from patients with other helminth diseases (ascariasis, ancylostomiasis, trichuriasis, enterobiasis, strongyloidiasis, hymenolepiasis, diphyllobothriasis, taeniasis, cysticercosis, hydatidosis and fascioliasis. Antigenic bands of 24, 28, 30, 35, 56, 117, 136 and 152 kDa were predominantly recognized in sera from all patients with toxocariasis. However, only bands of 24-35 kDa were highly specific for Toxocara infection (98.3%, whereas other antigenic bands observed displayed cross-reactivity. Additionally, when the results of the EITB-IgG test were compared to those of the ELISA-IgG test, a 100% concordance was observed for positive results in human toxocariasis cases. The concordance for negative results between the two tests for healthy subjects and patients with other helminth diseases were 96.3% and 53.7%, respectively, showing that the EITB-IgG test has a higher specificity than ELISA. In conclusion, the EITB-IgG test is a very useful tool to confirm the serological diagnosis of human toxocariasis.

  13. Rapid Detection of Rifampin-resistant Clinical Isolates of Mycobacterium tuberculosis by Reverse Dot Blot Hybridization

    Institute of Scientific and Technical Information of China (English)

    GUO Qian; WAN Kang Lin; YU Yan; ZHU Yan Ling; ZHAO Xiu Qin; LIU Zhi Guang; ZHANG Yuan Yuan; LI Gui Lian; WEI Jian Hao; WU Yi Mou

    2015-01-01

    Objective A PCR-reverse dot blot hybridization (RDBH) assay was developed for rapid detection of rpoB gene mutations in‘hot mutation region’ of Mycobacterium tuberculosis (M. tuberculosis). Methods 12 oligonucleotide probes based on the wild-type and mutant genotype rpoB sequences of M. tuberculosis were designed to screen the most frequent wild-type and mutant genotypes for diagnosing RIF resistance. 300 M. tuberculosis clinical isolates were detected by RDBH, conventional drug-susceptibility testing (DST) and DNA sequencing to evaluate the RDBH assay. Results The sensitivity and specificity of the RDBH assay were 91.2%(165/181) and 98.3%(117/119), respectively, as compared to DST. When compared with DNA sequencing, the accuracy, positive predictive value (PPV) and negative predictive value (NPV) of the RDBH assay were 97.7%(293/300), 98.2%(164/167), and 97.0%(129/133), respectively. Furthermore, the results indicated that the most common mutations were in codons 531 (48.6%), 526 (25.4%), 516 (8.8%), and 511 (6.6%), and the combinative mutation rate was 15 (8.3%). One and two strains of insertion and deletion were found among all strains, respectively. Conclusion Our findings demonstrate that the RDBH assay is a rapid, simple and sensitive method for diagnosing RIF-resistant tuberculosis.

  14. Evaluation of western blotting for the diagnosis of enzootic bovine leukemia

    Directory of Open Access Journals (Sweden)

    Gonzalez E.T.

    1999-01-01

    Full Text Available A western blotting (WB procedure has been developed for detecting antibodies to bovine leukosis virus (BLV in cattle sera. Two hundred and thirty three serum samples from naturally infected cattle with BLV virus and serial bleedings from experimentally BLV infected cows were used. An agar gel immunodiffusion test (AGID was used for comparing with the results obtained by WB. The AGID positive sera showed a different degree of reactivity by WB test against the two most important viral antigens (gp51 and p24, or against one of them. Other proteins (gp30, p15, p12 and p10 were not detected with any AGID positive sera, being observed occasionally three bands corresponding to the p24 protein. Using sera obtained by BLV experimental inoculation, the antibodies directed to p24 appeared early (between the 2nd and 4th week post inoculation and thereafter antibodies to gp51were detected in some animals. The analysis of field serum samples by AGID as compared to WB showed an agreement of 90.9%. Only 1.7% of sera were negative by AGID and positive by WB and 7.2% that were not conclusive by AGID and were defined by WB (4.2% as positive and 3.0% as negative.

  15. Rapid detection of intestinal pathogens in fecal samples by an improved reverse dot blot method

    Institute of Scientific and Technical Information of China (English)

    Jian-Ming Xing; Su Zhang; Ying Du; Dan Bi; Li-Hui Yao

    2009-01-01

    AIM:To develop a new, rapid and accurate reverse dot blot (RDB) method for the detection of intestinal pathogens in fecal samples.METHODS:The 12 intestinal pathogens tested were Salmonella spp., Brucella spp., Escherichia coli O157:H7,Clostridium botulinum, Bacillus cereus,Clostridium perfringens, Vibrio parahaemolyticus,Shigella spp., Yersinia enterocolitica, Vibrio cholerae,Listeria monocytogenes and Staphylococcus aureus.The two universal primers were designed to amplify two variable regions of bacterial 16S and 23S rDNA genes from all of the 12 bacterial species tested. Five hundred and forty fecal samples from the diarrhea patients were detected using the improved RDB assay.RESULTS:The methods could identify the 12 intestinal pathogens specifically, and the detection limit was as low as 103 CFUs. The consistent detection rate of the improved RDB assay compared with the traditional culture method was up to 88.75%.CONCLUSION:The hybridization results indicated that the improved RDB assay developed was a reliable method for the detection of intestinal pathogen in fecal samples.

  16. Development of a dot blot assay using gene probes for the detection of enteroviruses in water

    International Nuclear Information System (INIS)

    Enteric viruses are viruses which replicate in the intestinal tract of man and animals. One mode of transmission for enteric viruses is the fecal-oral route. Drinking water which has been contaminated with sewage or sewage effluent has been implicated as a means for the spread of enteric viruses. Current methods for the detection of enteric viruses in water requires the use of animal cell culture. This technique has several drawbacks. More rapid techniques, such as fluorescent antibody or radioimmunoassay do not have the needed sensitivity to detect the low levels of virus found in contaminated water. An alternative technique for the detection of viruses in water was sought. Recent advances in recombinant DNA technology now makes it possible to detect viruses without the use of cell culture or antibodies. Gene probes that hybridize to the RNA of poliovirus and hepatitis A virus were tested for their ability to detect different enteric viruses. The probes were labeled with 32P dCTP and 32P dATP to a specific activity greater then 1.0 x 109 cpm/ug DNA. One infectious unit of poliovirus and hepatitis A virus was detected using labeled cDNA probes. Upon comparison, the dot blot assay was as sensitive as tissue culture for the detection of poliovirus in beef extract, secondary effluent, and tap water. Environmental samples, such as secondary effluent, reclaimed wastewater and unchlorinated drinking water were also assayed for poliovirus and hepatitis A virus with the use of gene probes. The results presented here offer an alternative method for screening water samples for the presence of enteric viruses

  17. Immunodot blot assay to detect Helicobacter pylori using monoclonal antibodies against the 26 kDa protein.

    Science.gov (United States)

    Amini Najafabadi, Hossein; Paknejad, Maliheh; Farshad, Shohreh; Mohammadian, Taher; Seyyed Ebrahimi, Shadi Sadat; Amini Najafabadi, Azadeh

    2012-12-01

    Development of a specific immunoassay to detect Helicobacter pylori infection in stool samples requires monoclonal antibody against the specific antigen. The aims of this study were to establish monoclonal antibodies against the 26 kDa protein of H. pylori and develop an immunodot blot for their application to recognize H. pylori infection using stool samples. Mice were immunized intraperitoneally with homogenized gel containing the 26 kDa band of cell surface proteins of H. pylori in sodium dodecyl sulfate-polyacrylamide gel electrophoresis. The monoclonal antibodies were produced using the hybridoma technique. Reactivity of monoclonal antibodies was tested with the purified 26 kDa antigen and cell surface proteins from cultured H. pylori by ELISA. Furthermore reactivity of monoclonal antibodies was tested on negative and positive stool samples for H. pylori and suspensions of several major bacteria in stool by immunodot blot assay. Five stable hybridoma monoclones were obtained. The concordant reactivity of the monoclonal antibodies with H. pylori present in the stool samples, which had been tested previously using an ACON ELISA kit for H. pylori stool antigen testing, and unreactivity with several different major fecal bacteria in immunodot blotting indicates high specificity of the immunodot blot based on the reaction of produced monoclonal antibodies with the H. pylori antigen in stools. The findings indicate that the novel immunodot blot developed based on new monoclonal antibodies for stool antigens would be useful as a noninvasive method of diagnosing H. pylori infection. PMID:23244318

  18. Product-selective blot: a technique for measuring enzyme activities in large numbers of samples and in native electrophoresis gels

    International Nuclear Information System (INIS)

    A method termed product-selective blotting has been developed for screening large numbers of samples for enzyme activity. The technique is particularly well suited to detection of enzymes in native electrophoresis gels. The principle of the method was demonstrated by blotting samples from glutaminase or glutamate synthase reactions into an agarose gel embedded with ion-exchange resin under conditions favoring binding of product (glutamate) over substrates and other substances in the reaction mixture. After washes to remove these unbound substances, the product was measured using either fluorometric staining or radiometric techniques. Glutaminase activity in native electrophoresis gels was visualized by a related procedure in which substrates and products from reactions run in the electrophoresis gel were blotted directly into a resin-containing image gel. Considering the selective-binding materials available for use in the image gel, along with the possible detection systems, this method has potentially broad application

  19. Imaging and high-sensitivity quantification of chemiluminescent labeled DNA-blots

    International Nuclear Information System (INIS)

    The present thesis has for objective the development of both, methods of DNA labeling by chemiluminescence (via the catalytic activity of the enzyme alkaline phosphatase - AP) and an appropriate imaging system. Offering a competitive alternative to the detection of classical radio-labels in molecular-biological experiments of the blotting type, this technique should permit the realization of quantitative studies of gene expression at ultra-high sensitivity necessary in particular for differential-screening experiments. To reach our aim. we separated the project into three different parts. In a first step an imager based on a liquid-nitrogen-cooled CCD coupled to a standard optics (50 mm/fl.2) has been installed and characterized. This system offers a sensitive area of up to 625 cm2, a spatial resolution of 0.3-1 mm (depending on the field of view) and a sensitivity sufficient to detect 10 fg/mm2 labeled DNA. In a second part, the chemiluminescent light-generation process in solution has been investigated to optimize the parameters temperature. pH and concentration of the substrate as well as the enzyme. The substrate offering the highest light yield (CDP-Star in addition with the enhancer EMERALD II) allows quantification of AP down to 10-15 M within a dynamic range of 104 in solution. Finally. preparation, immobilization and detection of AP-labeled DNA probes (via a biotin-streptavidin-biotin-AP bridge) on nylon membranes has been optimized. A linear relation between the light intensities and the amount of DNA was observed in a range of 10 fg/mm2 - 100 pg/mm2. Hybridization of the probes to bacterial cloned target-DNA has been addressed after examination of the best hybridization conditions. Our protocol includes the treatment of a proteinase, which resulted in a significantly lower background on the filter. The results of our investigations suggest that the main conditions for a reliable differential-screening experiment are fulfilled when using chemiluminescent

  20. The AMeX method: a multipurpose tissue-processing and paraffin-embedding method. II. Extraction of spooled DNA and its application to Southern blot hybridization analysis.

    OpenAIRE

    Y. Sato; Mukai, K.; Matsuno, Y.; Furuya, S; Kagami, Y; Miwa, M; Shimosato, Y.

    1990-01-01

    In our previous report, we described a new fixation and paraffin-embedding method (the AMeX method) that preserves many of the antigens that are normally destroyed by routine formalin fixation. The current study was conducted to examine the preservation of high-molecular-weight DNA in tissues processed by this method. DNA was extracted from AMeX-processed tissue sections after deparaffinization by the same method as that used to extract DNA from fresh tissues. The total amounts of DNA extract...

  1. Evaluation of western blotting for the diagnosis of enzootic bovine leukemia Avaliação da técnica de western blot no diagnóstico da leucose enzoótica bovina

    OpenAIRE

    E.T. Gonzalez; G.A. Oliva; Norimine, J; V. Cid de la Paz; M. G. Echeverría

    1999-01-01

    A western blotting (WB) procedure has been developed for detecting antibodies to bovine leukosis virus (BLV) in cattle sera. Two hundred and thirty three serum samples from naturally infected cattle with BLV virus and serial bleedings from experimentally BLV infected cows were used. An agar gel immunodiffusion test (AGID) was used for comparing with the results obtained by WB. The AGID positive sera showed a different degree of reactivity by WB test against the two most important viral antige...

  2. Analysis of cell wall extracts of Candida albicans by sodium dodecyl sulfate-polyacrylamide gel electrophoresis and Western blot techniques.

    OpenAIRE

    Ponton, J; J. M. Jones

    1986-01-01

    Cell walls of intact yeast- and mycelial-phase Candida albicans B311 were extracted with different compounds: dithiothreitol, dithiothreitol with protease, dithiothreitol with lyticase, and dithiothreitol with protease followed by beta-glucuronidase with chitinase. Extracts were analyzed by sodium dodecyl sulfate-polyacrylamide gel electrophoresis and Western blot techniques. Dithiothreitol extracts contained the most satisfactory array of components for study. Analysis of these extracts demo...

  3. Validity of Interpretation Criteria for Standardized Western Blots (Immunoblots) for Serodiagnosis of Lyme Borreliosis Based on Sera Collected throughout Europe

    OpenAIRE

    Hauser, Ulrike; Lehnert, Gisela; Wilske, Bettina

    1999-01-01

    Western blotting (WB; immunoblotting) is a widely used tool for the serodiagnosis of Lyme borreliosis (LB), but so far, no generally accepted criteria for performance and interpretation have been established in Europe. The current study was preceeded by a detailed analysis of WB with whole-cell lysates of three species of Borrelia burgdorferi sensu lato (U. Hauser, G. Lehnert, R. Lobentanzer, and B. Wilske, J. Clin. Microbiol. 35:1433–1444, 1997). In that study, interpretation criteria for a ...

  4. Simple and Sensitive Detection of HBsAg by Using a Quantum Dots Nanobeads Based Dot-Blot Immunoassay

    OpenAIRE

    Zhang, Pengfei; Lu, Huiqi; Chen, Jia; HAN, HUANXING; MA, Wei

    2014-01-01

    Simple and sensitive detection of infectious disease at an affordable cost is urgently needed in developing nations. In this regard, the dot blot immunoassay has been used as a common protein detection method for detection of disease markers. However, the traditional signal reporting systems, such as those using enzymes or gold nanoparticles lack sensitivity and thus restrict the application of these methods for disease detection. In this study, we report a simple and sensitive detection meth...

  5. A Proteomics Approach to the Protein Normalization Problem: Selection of Unvarying Proteins for MS-Based Proteomics and Western Blotting.

    Science.gov (United States)

    Wiśniewski, Jacek R; Mann, Matthias

    2016-07-01

    Proteomics and other protein-based analysis methods such as Western blotting all face the challenge of discriminating changes in the levels of proteins of interest from inadvertent changes in the amount loaded for analysis. Mass-spectrometry-based proteomics can now estimate the relative and absolute amounts of thousands of proteins across diverse biological systems. We reasoned that this new technology could prove useful for selection of very stably expressed proteins that could serve as better loading controls than those traditionally employed. Large-scale proteomic analyses of SDS lysates of cultured cells and tissues revealed deglycase DJ-1 as the protein with the lowest variability in abundance among different cell types in human, mouse, and amphibian cells. The protein constitutes 0.069 ± 0.017% of total cellular protein and occurs at a specific concentration of 34.6 ± 8.7 pmol/mg of total protein. Since DJ-1 is ubiquitous and therefore easily detectable with several peptides, it can be helpful in normalization of proteomic data sets. In addition, DJ-1 appears to be an advantageous loading control for Western blot that is superior to those used commonly used, allowing comparisons between tissues and cells originating from evolutionarily distant vertebrate species. Notably, this is not possible by the detection and quantitation of housekeeping proteins, which are often used in the Western blot technique. The approach introduced here can be applied to select the most appropriate loading controls for MS-based proteomics or Western blotting in any biological system. PMID:27297043

  6. Comparison of Crude and Excretory/Secretory Antigens for the Diagnosis of Fasciola hepatica in Sheep by Western Blotting

    OpenAIRE

    GÖNENÇ, Bahadır; SARIMEHMETOĞLU, Hıfsı Oğuz

    2004-01-01

    Crude and excretory/secretory (E/S) antigens of Fasciola hepatica were subjected to SDS-PAGE and Western blot analysis in order to identify protein bands that would enable the specific and sensitive immunodiagnosis of sheep. Sera from 20 sheep with natural infections of F. hepatica, Dicrocoelium dendriticum, Cyst hydatid, Cysticercus tenuicollis, Trichostrongylidae, Paramphistomum spp., and Trichuris spp. and the same number of sera naturally infected with the same helminths without F. hepati...

  7. Stain Free Total Protein Staining is a Superior Loading Control to β-Actin for Western Blots

    OpenAIRE

    Gilda, Jennifer E.; Aldrin V. Gomes

    2013-01-01

    Semi-Quantification of proteins using Western blots typically involves normalization against housekeeping genes such as β-actin. More recently, ponceau S and Coomassie blue staining have both been shown to be suitable alternatives to housekeeping genes as loading controls. Stain free total protein staining offers the advantage of no staining or destaining steps. Evaluation of the use of Stain free staining as an alternative to β-actin or the protein stain ponceau S showed that Stain free stai...

  8. Investigation of Anti-Toxocara Antibodies in Epileptic Patients and Comparison of Two Methods: ELISA and Western Blotting

    Directory of Open Access Journals (Sweden)

    Mohammad Zibaei

    2013-01-01

    Full Text Available The relationship between Toxocara infection and epilepsy was previously demonstrated by several case-control studies and case reports. These previous studies were often based on the enzyme-linked immunosorbent assay (ELISA using Toxocara excretory-secretory antigens, which are not specific due to cross-reactivity with other parasitic infections such as ascariasis, trichuriasis, and anisakiasis. An immunoblot analysis is highly specific and can detect low levels of Toxocara antibodies. Therefore, this assay may be useful in the identification of toxocariasis in epileptic patients. We examined patients who had epilepsy and healthy subjects for seropositivity for Toxocara infection by ELISA and Western blotting. Out of 85 epileptic patients, 10 (11.8% and 3 (3.5% persons exhibited Toxocara immunoglobulin G (IgG antibodies responses by ELISA and by both techniques, respectively. Moreover, in the healthy group (, 3 (3.5% persons were positive by ELISA, but none was detected by Western blotting. This study indicates that Toxocara infection is a risk factor for epilepsy in Iran. These findings strongly suggest the need to perform Western blotting immunodiagnosis, as well as the ELISA using Toxocara excretory-secretory antigens, to improve diagnosis of human toxocariasis in patients with epilepsy.

  9. DETECTION OF BREAST CANCER MICROMETASTASES IN BONE MARROW USING REVERSE-TRANSCRIPTASE CHAIN REACTION AND SOUTHERN HYBRIDIZATION

    Institute of Scientific and Technical Information of China (English)

    LI Jin-feng; ZHANG Lei; SUN Su-lian

    1999-01-01

    Objective: The aim of this study was to detect micrometastases in bone marrow of primary breast cancer patients, and compare with other clinical parameters.Methods: Cytokeratin 19 (CK-19) gene mRNA expression was detected by reverse transcriptase-polymerase chain reaction (RT-PCR) and Southern blot hybridization.Human breast cancer cell line T47D was mixed with bone marrow cells in different proportions. The positive detection rate was compared among RT-PCR, Southern blotting and immunohistochemistry (IHC) methods. Results: Cytokeratin 19 gene was expressed in all 6 positive control samples while the expression was not seen in 8 negative control samples. In all 54 patients 14 cases were CK-19 positive (25.9%) by RT-PCR, another positive signal was obtained in 5/54 (9.3%) of bone marrow samples by Southern blotting. The total positive cases are 19/54 (35.2%).CK-19 IHC+ cells were detected at a dilution of one T47D cell in 5×104 bone marrow cells, while the sensitivity detected by PCR and Southern blot hybridization was at 1:5×105 and 1:1×106, respectively. This demonstrates that RT-PCR and Southern blotting was at least 20 times more sensitive than the IHC method. The micrometastases positive rate of the larger tumor size group (>5.0 cm) was significantly (P<0.05) greater than that of the smaller tumor size group (0-2.0 cm). Conclusion: detection of micrometastases in bone marrow by RT-PCR and Southern blotting, using CK-19 as a biological marker, is highly sensitive and it is a method to be used for anticipating the prognosis of breast cancer patients.

  10. Modification of T-cell antigenic properties of tetanus toxoid by SDS-PAGE separation. Implications for T-cell blotting

    DEFF Research Database (Denmark)

    Christensen, C B; Theander, T G

    1997-01-01

    Using Tetanus Toxoid (TT) as a model antigen the T-cell Blotting method was evaluated. Peripheral blood mononuclear cell (PBMC) cultures were stimulated by blotted nitrocellulose-bound TT or soluble TT. SDS-Poly-Acrylamide-Gel-Electrophoresis separated TT only induced proliferation in 20% of the...

  11. Dot-Blot Hybridization for Detection of Five Cucurbit Viruses by Digoxigenin-Labelled cDNA Probes

    Institute of Scientific and Technical Information of China (English)

    MENG Juan; GU Qin-sheng; LIN Shi-ming; PENG Bin; LIU Li-feng; TIAN Yan-ping; LI Li

    2007-01-01

    Dot-blot hybridization was applied in this paper to detect five viruses infecting cucurbitaceous crops,Zuccini yellow mosaic virus(ZYMV),Watermelon mosaic virus(WMV),Cucumber mosaic virus(CMV),Papaya ringspot virus watermelon strain(PRSV-W)and Squash mosaic virus(SqMV),as a good alternative assay in seed health test and epidemiological and transgenic research.Digoxigenin-labelled cDNA probes of the five viruses were synthesized by PCR with the specific primers and applied in dot-blot hybridization to detect five viruses in crude extraction of the infected leaves.And three SqMV probes of different lengths(0.55,1.6,and 2.7 kb,respectively)were designed to investigate the effect of hybridization.The results showed that the sensitivity for detecting the crude extraction of infected leaves by ZYMV,WMV,CMV,PRSV-W,and SqMV was down to 1:160,1:160,1:320,1:160,and 1:320,respectively.Three SqMV probes of different length showed no differences on the sensitivity and specificity.The digoxigenin-labelled probes prepared by PCR could be used for accurate and rapid identification of 5 viruses infecting cucurbitaceous crops with good stabilities,sensitivities,specificity,and reproducibilities.

  12. Simple and sensitive detection of HBsAg by using a quantum dots nanobeads based dot-blot immunoassay.

    Science.gov (United States)

    Zhang, Pengfei; Lu, Huiqi; Chen, Jia; Han, Huanxing; Ma, Wei

    2014-01-01

    Simple and sensitive detection of infectious disease at an affordable cost is urgently needed in developing nations. In this regard, the dot blot immunoassay has been used as a common protein detection method for detection of disease markers. However, the traditional signal reporting systems, such as those using enzymes or gold nanoparticles lack sensitivity and thus restrict the application of these methods for disease detection. In this study, we report a simple and sensitive detection method for the detection of infectious disease markers that couples the dot-blot immunoassay with quantum dots nanobeads (QDNBs) as a reporter. First, the QDNBs were prepared by an oil-in-water emulsion-evaporation technique. Because of the encapsulation of several QDs in one particle, the fluorescent signal of reporter can be amplified with QDNBs in a one-step test and be read using a UV lamp obviating the need for complicated instruments. Detection of disease-associated markers in complex mixture is possible, which demonstrates the potential of developing QDNBs into a sensitive diagnostic kit. PMID:24505238

  13. Immunohistochemical and Western Blotting Analyses of Ganoine in the Ganoid Scales of Lepisosteus oculatus: an Actinopterygian Fish.

    Science.gov (United States)

    Sasagawa, Ichiro; Oka, Shunya; Mikami, Masato; Yokosuka, Hiroyuki; Ishiyama, Mikio; Imai, Akane; Shimokawa, Hitoyata; Uchida, Takashi

    2016-05-01

    In order to compare its characteristics with those of jaw tooth collar enamel, normally developing and experimentally regenerating ganoine from ganoid scales of Lepisosteus oculatus (spotted gar), an actinopterygian fish species, was examined by Western blotting and immunohistochemistry. Amelogenin, a major enamel matrix protein (EMP), is widely found from sarcopterygian fish to mammals. Therefore, we used antimammalian amelogenin antibodies and antisera: an antibody against bovine amelogenin; antiserum against porcine amelogenin; and region-specific antibodies or antiserum against the C-terminus, middle region, or N-terminus of porcine amelogenin in this study. Positive immunoreactivity with the antibody against bovine amelogenin, antiserum against porcine amelogenin, and the middle and C-terminal region-specific antibodies was detected in both normally developing and regenerating ganoine matrix, as well as in granules found within inner ganoine epithelial cells. These immunohistochemical analyses indicated that the Lepisosteus ganoine matrix contains EMP-like proteins with epitopes similar to mammalian amelogenins. In Western blotting analyses of regenerating ganoid scales with the antibovine amelogenin antibody, two protein bands with molecular weights of approximately 78 and 65 kDa were detected, which were similar to those found in Lepisosteus tooth enamel. Our study suggests that in Lepisosteus, EMP-like proteins in the ganoine matrix corresponded to those in tooth enamel. However, it was revealed that the 78 and 65 kDa EMP-like proteins were different from 27 kDa bovine amelogenin. PMID:27139791

  14. Identification of Glioblastoma Phosphotyrosine-Containing Proteins with Two-Dimensional Western Blotting and Tandem Mass Spectrometry

    Directory of Open Access Journals (Sweden)

    Tianyao Guo

    2015-01-01

    Full Text Available To investigate the presence of, and the potential biological roles of, protein tyrosine phosphorylation in the glioblastoma pathogenesis, two-dimensional gel electrophoresis- (2DGE- based Western blotting coupled with liquid chromatography-electrospray ionization-tandem mass spectrometry (LC-ESI-MS/MS analysis was used to detect and identify the phosphotyrosine immunoreaction-positive proteins in a glioblastoma tissue. MS/MS and Mascot analyses were used to determine the phosphotyrosine sites of each phosphopeptide. Protein domain and motif analysis and systems pathway analysis were used to determine the protein domains/motifs that contained phosphotyrosine residue and signal pathway networks to clarify the potential biological functions of protein tyrosine phosphorylation. A total of 24 phosphotyrosine-containing proteins were identified. Each phosphotyrosine-containing protein contained at least one tyrosine kinase phosphorylation motif and a certain structural and functional domains. Those phosphotyrosine-containing proteins were involved in the multiple signal pathway systems such as oxidative stress, stress response, and cell migration. Those data show 2DGE-based Western blotting, MS/MS, and bioinformatics are a set of effective approaches to detect and identify glioblastoma tyrosine-phosphorylated proteome and to effectively rationalize the biological roles of tyrosine phosphorylation in the glioblastoma biological systems. It provides novel insights regarding tyrosine phosphorylation and its potential role in the molecular mechanism of a glioblastoma.

  15. Mere end blot pirringer

    DEFF Research Database (Denmark)

    Jantzen, Christian; Østergaard, Per

    2006-01-01

    Med udgangspunkt i en række cases på vellykkede oplevelsesøkonomiske forretningsmodeller argumenterer artiklen for, at oplevelsesprodukter skal bygge på et klart tema, som forbrugeren kan koble sig sanse- og følelsesmæssigt op på. Forbrugeren skal kunne omsætte produktets pirringer til egne erfar...

  16. Pearl southern highbush blueberry

    Science.gov (United States)

    The USDA-ARS Southern Horticulture has developed and released a new productive early ripening southern highbush blueberry cultivar, Pearl. 'Pearl', tested as MS 812, came from the cross Bluecrisp X Magnolia. The pedigree of Bluecrisp is unknown but it was tested as Fla 84-40, and Magnolia came fr...

  17. Detection of human cytomegalovirus by slot-blot hybridization assay employing oligo-primed 32P-labelled probe

    International Nuclear Information System (INIS)

    A 32P-labelled Hind III-0 DNA fragment (nine Kilobases; Kb) from human cytomegalovirus AD-169 (HCMV) was used in slot-blot hybridization assay for the detection of HCMV in clinical samples. The results obtained with DNA hybridization assay (DNA HA) were compared with virus isolation using conventional tube cell culture (CTC) and centrifugation vial culture (CVC), immunofluorescence (IF), and complement fixation test (CFT). Of 15 CTC-positive samples, 13 were positive with DNA HA (sensitivity 86.7%). Also, 14 additional samples were DNA HA-positive but CTC-negative. CVC and/or IF confirmed the diagnosis in nine of 14; the remaining five samples were from three patients who showed fourfold rising antibody titre by CFT. Although DNA HA using 32P-labelled probes is relatively cumbersome and expensive, it is a valuable test for quantitation of viral shedding in patients with HCMV infections who may benefit from antiviral therapy

  18. Detection of enteroinvasive Escherichia coli on a colony blot filter paper by hybridization with a 17 kb probe

    International Nuclear Information System (INIS)

    Enteroinvasive Escherichia coli (EIEC) and Shigella cause dysentery by invading epithelial cells of the colon. EIEC are difficult to identify by normal biochemical tests in a routine bacteriology laboratory. The genetics of the virulence of Shigella and EIEC are similar. Both contain plasmids of 120-140 megadalton (mDa) that are necessary for virulence. A 17 kb EcoRI digestion fragment of pWR 100, the 140 MDA plasmid of S. flexneri 5 (M9OT), was shown to be specific in differentiating EIEC from non-EIEC. A radiolabelled probe can be easily prepared and used as a specific probe to identify EIEC in either colony or stool blot sample by the hybridization assay. 9 refs, 2 figs

  19. Standardisation of Western blotting to detect HTLV-1 antibodies synthesised in the central nervous system of HAM/TSP patients

    Directory of Open Access Journals (Sweden)

    Luiz Claudio Pereira Ribeiro

    2013-09-01

    Full Text Available Intrathecal synthesis of human T-lymphotropic virus type 1 (HTLV-1 antibodies (Abs represents conclusive evidence of a specific immune response in the central nervous system of HTLV-1 associated myelopathy/tropical spastic paraparesis (HAM/TSP patients. Western blotting (WB for HTLV Abs in serum is a confirmatory test for HTLV-1 infection. The aim of this study was to standardise the Western blot to demonstrate the intrathecal pattern of Abs against HTLV-1 proteins in HAM/TSP patients. Paired cerebrospinal fluid (CSF and serum samples were selected from 20 patients with definite HAM/TSP, 19 HTLV-1 seronegative patients and two HTLV-1 patients without definite HAM/TSP. The presence of reactive bands of greater intensity in the CSF compared to serum (or bands in only the CSF indicated the intrathecal synthesis of anti-HTLV-1 Abs. All definite HAM/TSP patients presented with an intrathecal synthesis of anti-HTLV-1 Abs; these Abs were not detected in the control patients. The most frequent intrathecal targets of anti-HTLV-1 Abs were GD21, rgp46-I and p24 and, to a lesser extent, p19, p26, p28, p32, p36, p53 gp21 and gp46. The intrathecal immune response against env (GD21 and rgp46-I and gag (p24 proteins represents the most important humoral pattern in HAM/TSP. This response may be used as a diagnostic marker, considering the frequent association of intrathecal anti-HTLV-1 Ab synthesis with HAM/TSP and the pathogenesis of this neurological disease.

  20. Mammalian α-polymerase: cloning of partial complementary DNA and immunobinding of catalytic subunit in crude homogenate protein blots

    International Nuclear Information System (INIS)

    A new polyclonal antibody against the α-polymerase catalytic polypeptide was prepared by using homogeneous HeLa cellα-polymerase. The antibody neutralized α-polymerase activity and was strong and specific for the α-polymerase catalytic polypeptide (M/sub r/ 183,000) in Western blot analysis of crude extracts of HeLa cells. The antibody was used to screen a cDNA library of newborn rat brain poly(A+) RNA in λgt11. A positive phage was identified and plaque purified. This phage, designated λpolα1.2, also was found to be positive with an antibody against Drosophila α-polymerase. The insert in λpolα1.2 (1183 base pairs) contained a poly(A) sequence at the 3' terminus and a short in-phase open reading frame at the 5' terminus. A synthetic oligopeptide (eight amino acids) corresponding to the open reading frame was used to raise antiserum in rabbits. Antibody affinity purified from this serum was found to be immunoreactive against purified α-polymerase by enzyme-linked immunosorbent assay and was capable of immunoprecipitating α-polymerase. This indicated the λpolα1.2 insert encoded an α-polymerase epitope and suggested that the cDNA corresponded to an α-polymerase mRNA. This was confirmed in hybrid selection experiments using pUC9 containing the cDNA insert and poly(A+) RNA from newborn rat brain; the insert hybridized to mRNA capable of encoding α-polymerase catalytic polypeptides. Northern blot analysis of rat brain poly(A+) RNA revealed that this mRNA is ∼5.4 kilobases

  1. Quantitative Western ligand blotting reveals common patterns and differential features of IGFBP-fingerprints in domestic ruminant breeds and species.

    Science.gov (United States)

    Wirthgen, Elisa; Höflich, Christine; Spitschak, Marion; Helmer, Carina; Brand, Bodo; Langbein, Jan; Metzger, Friedrich; Hoeflich, Andreas

    2016-02-01

    The insulin-like growth factor binding proteins (IGFBPs) are determinants of local IGF-effects and thus have an impact on growth and metabolism in vertebrate species. In farm animals, IGFBPs are associated with traits such as growth rate, body composition, milk production, or fertility. It may be assumed, that selective breeding and characteristic phenotypes of breeds are related to differential expression of IGFBPs. Therefore, the aim of the present study was to investigate the effects of selective breeding on blood IGFBP concentrations of farm animals. Breeds of the sheep, goat, and cattle species were investigated. IGFBP-3, -2, and -4 were analyzed with quantitative Western ligand blotting (qWLB), enabling comprehensive monitoring of intact IGFBPs with IGF-binding capacity. We show that in sera of all species and breeds investigated, IGFBP-3, -2, and -4 were simultaneously detectable by qWLB analysis. IGFBP-3 and the total amount of IGFBPs were significantly increased (Pcows had higher levels of IGFBP-4 (P<0.05), if compared to conventional crossbreeds of beef cattle. In Dwarf goats the ratio of IGFBP-3/IGFBP-2 was about 3-fold higher than in other goat breeds (P<0.001). The total IGFBP amount of Toggenburg goats was reduced (P<0.05), compared to the other goat breeds. In conclusion, our data indicate that common and specific features of IGFBP fingerprints are found in different ruminant species and breeds. Our findings may introduce quantitative Western ligand blotting as an attractive tool for biomarker development and molecular phenotyping in farm animal breeds. PMID:26597140

  2. Murine interleukin 1 receptor. Direct identification by ligand blotting and purification to homogeneity of an interleukin 1-binding glycoprotein

    International Nuclear Information System (INIS)

    Functional receptors (IL1-R) for the proinflammatory cytokine interleukin 1 (IL1) were solubilized from plasma membranes of the NOB-1 subclone of murine EL4 6.1 thymoma cells using the zwitterionic detergent 3[(3-cholamidopropyl)dimethylammonio]-1-propanesulfonate (CHAPS). Membrane extracts were subjected to sodium dodecyl sulfate-polyacrylamide gel electrophoresis, transferred to nitrocellulose membranes, and ligand blotted with 125I-labeled recombinant human IL1 alpha in order to reveal proteins capable of specifically binding IL1. A single polydisperse polypeptide of Mr approximately equal to 80,000 was identified in this way, which bound IL1 alpha and IL1 beta with the same affinity as the IL1-R on intact NOB-1 cells (approximately equal to 10(-10) M). The IL1-binding polypeptide was only seen in membranes from IL1-R-bearing cells and did not react with interleukin 2, tumor necrosis factor alpha, or interferon. IL1-R was purified to apparent homogeneity from solubilized NOB-1 membranes by affinity chromatography on wheat germ agglutinin-Sepharose and IL1 alpha-Sepharose. Gel electrophoresis and silver staining of purified preparations revealed a single protein of Mr approximately equal to 80,000 which reacted positively in the ligand-blotting procedure and which we identify as the ligand-binding moiety of the murine IL1-R. Purified IL1-R exhibited the same affinity and specificity as the receptor on intact cells. The relationship of this protein to proteins identified by covalent cross-linking studies is discussed

  3. Serologic immunoreactivity to Neospora caninum antigens in dogs determined by indirect immunofluorescence, western blotting and dot-ELISA.

    Science.gov (United States)

    Pinheiro, A M; Costa, M F; Paule, B; Vale, V; Ribeiro, M; Nascimento, I; Schaer, R E; Almeida, M A O; Meyer, R; Freire, S M

    2005-06-10

    Neospora caninum, is a coccidian protozoan known as a major cause of bovine abortion and canine neuropathies. The aim of the present study was to develop a reliable and quick test to detect antibodies to N. caninum in dog sera. Sixty-five serum samples from dogs, including 35 positive and 30 negative for N. caninum antibodies were used for standardization of the test. In parallel, immunoreactivity of the sera to Toxoplasma gondii antigens was investigated using a passive agglutination test. A dot-ELISA test, using soluble extract of N. caninum tachyzoites on nitrocellulose ester membranes, was developed and standardized. SDS-PAGE and complementary analysis of reactivity by Western blotting were used for the characterization of the immunoreactive fractions of all tested sera. The sensitivity and specificity of the dot-ELISA were 94 and 73%, respectively, compared to IFAT at a cut-off of 1:50, and 87 and 100% compared to IFAT at a cut-off of 1:25. Among the sera that tested positively for both IFAT and dot-ELISA, only 8.6% were reactive to T. gondii. The most immunoreactive fractions in Western blots were the 14-, 33-, 42- and 55 kDa bands, with percentages of 42, 60, 42 and 37%, respectively. The 60 kDa band showed a non-specific reaction in 43% of neosporosis-negative animals by both dot-ELISA and IFAT. These results indicate that the dot-ELISA using N. caninum antigen present good sensitivity and specificity, and might be used as a screening test to detect antibodies to N. caninum in dogs. PMID:15893072

  4. Earthquakes in Southern California

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — There have been many earthquake occurrences in Southern California. This set of slides shows earthquake damage from the following events: Imperial Valley, 1979,...

  5. European Southern Observatory

    CERN Multimedia

    1970-01-01

    Professor A. Blaauw, Director general of the European Southern Observatory, with George Hampton on his right, signs the Agreement covering collaboration with CERN in the construction of the large telescope to be installed at the ESO Observatory in Chile.

  6. New Method for Simultaneous Species-Specific Identification of Equine Strongyles (Nematoda, Strongylida) by Reverse Line Blot Hybridization▿

    Science.gov (United States)

    Traversa, Donato; Iorio, Raffaella; Klei, Thomas R.; Kharchenko, Vitaliy A.; Gawor, Jakub; Otranto, Domenico; Sparagano, Olivier A. E.

    2007-01-01

    The ability of a reverse line blot (RLB) assay to identify 13 common species of equine small strongyles (cyathostomins) and to discriminate them from three Strongylus spp. (large strongyles) was demonstrated. The assay relied on the specific hybridization of PCR-amplified intergenic spacer DNA fragments of the nuclear ribosomal DNA to membrane-bound species-specific probes. All cyathostomins examined were unequivocally identified and simultaneously discriminated from each other and from three large strongyles (Strongylus edentatus, Strongylus equinus, and Strongylus vulgaris). This assay will enable the accurate and rapid identification of equine cyathostomins irrespective of their life cycle stage, opening important avenues for a better understanding of their biology and epidemiology and of the pathogenesis of cyathostomin-associated disease. In particular, this RLB method promises to be a powerful diagnostic tool to determine the roles of individual species in the pathogenesis of mixed infections and to elucidate some aspects of cyathostominosis. Also, it could represent a basic step toward the development of a rapid and simple molecular test for the early detection of drug-resistant genotypes of horse strongyle species. PMID:17626168

  7. New method for simultaneous species-specific identification of equine strongyles (nematoda, strongylida) by reverse line blot hybridization.

    Science.gov (United States)

    Traversa, Donato; Iorio, Raffaella; Klei, Thomas R; Kharchenko, Vitaliy A; Gawor, Jakub; Otranto, Domenico; Sparagano, Olivier A E

    2007-09-01

    The ability of a reverse line blot (RLB) assay to identify 13 common species of equine small strongyles (cyathostomins) and to discriminate them from three Strongylus spp. (large strongyles) was demonstrated. The assay relied on the specific hybridization of PCR-amplified intergenic spacer DNA fragments of the nuclear ribosomal DNA to membrane-bound species-specific probes. All cyathostomins examined were unequivocally identified and simultaneously discriminated from each other and from three large strongyles (Strongylus edentatus, Strongylus equinus, and Strongylus vulgaris). This assay will enable the accurate and rapid identification of equine cyathostomins irrespective of their life cycle stage, opening important avenues for a better understanding of their biology and epidemiology and of the pathogenesis of cyathostomin-associated disease. In particular, this RLB method promises to be a powerful diagnostic tool to determine the roles of individual species in the pathogenesis of mixed infections and to elucidate some aspects of cyathostominosis. Also, it could represent a basic step toward the development of a rapid and simple molecular test for the early detection of drug-resistant genotypes of horse strongyle species. PMID:17626168

  8. Western blotting using Strongyloides ratti antigen for the detection of IgG antibodies as confirmatory test in human strongyloidiasis

    Directory of Open Access Journals (Sweden)

    Luciana Pereira Silva

    2003-07-01

    Full Text Available The present study was conducted to evaluate the frequency of antigenic components recognized by serum IgG antibodies in Western blotting (WB using a Strongyloides ratti larval extract for the diagnosis of human strongyloidiasis. In addition, the WB results were compared to the enzyme-linked immunosorbent assay (ELISA and the indirect immunofluorescence antibody test (IFAT results. Serum samples of 180 individuals were analyzed (80 with strongyloidiasis, 60 with other intestinal parasitoses, and 40 healthy individuals. S. ratti was obtained from fecal culture of experimentally infected Rattus rattus. For IFAT, S. ratti larvae were used as antigen and S. ratti larval antigenic extracts were employed in WB and ELISA. Eleven S. ratti antigenic components were predominantly recognized by IgG antibodies in sera of patients with strongyloidiasis. There was a positive concordance for the three tests in 87.5% of the cases of strongyloidiasis. The negative concordance in the three tests was 94% and 97.5%, in patients with other intestinal parasitoses and healthy individuals, respectively. In cases of positive ELISA and negative IFAT results, diagnosis could be confirmed by WB. ELISA, IFAT, and WB using S. ratti antigens showed a high rate of sensitivity and specificity. In conclusion, WB using S. ratti larval extract was able to recognize 11 immunodominant antigenic components, showing to be a useful tool to define the diagnosis in cases of equivocal serology.

  9. The use of nitrocellulose blotting for the study of hepatitis B surface antigen electrophoresed in agarose gels

    International Nuclear Information System (INIS)

    Nitrocellulose-protein blotting of serum electrophoresed in agarose gels has been adapted for the study of hepatitis B surface antigen (HBsAg). 125I-labeled anti-HBs was used as the antigen probe, and the electrophoretic migration was monitored by autoradiography. The method required 3 μl or less of serum and could detect as little as 1 pg of purified HBsAg. Typically, the authors observed two bands of HBsAg; a moving band which migrated about one-third the distance moved by human serum albumin and a non-migratory band which remained at the loading site. Some examples of the use of the method include: (1) empirical methods for correlating HBsAg concentration in serum to film darkness; (2) observations of mobility changes in serial sera from dialysis patients with chronic HBsAg antigenemia; and (3) detection of related antigens such as antigen from the PLC/PRF/5 hepatoma tissue culture line and the cross-reacting woodchuck hepatitis virus surface antigen (WHsAg). (Auth)

  10. Exposure to Sarcocystis spp. in horses from Spain determined by Western blot analysis using Sarcocystis neurona merozoites as heterologous antigen.

    Science.gov (United States)

    Arias, M; Yeargan, M; Francisco, I; Dangoudoubiyam, S; Becerra, P; Francisco, R; Sánchez-Andrade, R; Paz-Silva, A; Howe, D K

    2012-04-30

    Horses serve as an intermediate host for several species of Sarcocystis, all of which utilize canids as the definitive host. Sarcocystis spp. infection and formation of latent sarcocysts in horses often appears to be subclinical, but morbidity can occur, especially when the parasite burden is large. A serological survey was conducted to determine the presence of antibodies against Sarcocystis spp. in seemingly healthy horses from the Galicia region of Spain. Western blot analyses using Sarcocystis neurona merozoites as heterologous antigen suggested greater than 80% seroprevalance of Sarcocystis spp. in a sample set of 138 horses. The serum samples were further tested with enzyme-linked immunosorbent assays (ELISAs) based on recombinant S. neurona-specific surface antigens (rSnSAGs). As expected for horses from the Eastern Hemisphere, less than 4% of the serum samples were positive when analyzed with either the rSnSAG2 or the rSnSAG4/3 ELISAs. An additional 246 horses were tested using the rSnSAG2 ELISA, which revealed that less than 3% of the 384 samples were seropositive. Collectively, the results of this serologic study suggested that a large proportion of horses from this region of Spain are exposed to Sarcocystis spp. Furthermore, the anti-Sarcocystis seroreactivity in these European horses could be clearly distinguished from anti-S. neurona antibodies using the rSnSAG2 and rSnSAG4/3 ELISAs. PMID:22019182

  11. Cross-Reactions between Toxocara canis and Ascaris suum in the diagnosis of visceral larva migrans by western blotting technique

    Directory of Open Access Journals (Sweden)

    NUNES Cáris Maroni

    1997-01-01

    Full Text Available Visceral larva migrans (VLM is a clinical syndrome caused by infection of man by Toxocara spp, the common roundworm of dogs and cats. Tissue migration of larval stages causes illness specially in children. Because larvae are difficult to detect in tissues, diagnosis is mostly based on serology. After the introduction of the enzyme-linked immunosorbent assay (ELISA using the larval excretory-secretory antigen of T. canis (TES, the diagnosis specificity was greatly improved although cross-reactivity with other helminths are still being reported. In Brazil, diagnosis is routinely made after absorption of serum samples with Ascaris suum antigens, a nematode antigenicaly related with Ascaris lumbricoides which is a common intestinal nematode of children. In order to identify T. canis antigens that cross react to A. suum antigens we analyzed TES antigen by SDS-PAGE and Western blotting techniques. When we used serum samples from patients suspected of VLM and positive result by ELISA as well as a reference serum sample numerous bands were seen (molecular weight of 210-200 kDa, 116-97 kDa, 55-50 kDa and 35-29 kDa. Among these there is at least one band with molecular weight around 55-66 kDa that seem to be responsible for the cross-reactivity between T. canis e A. suum once it disappears when previous absorption of serum samples with A. suum antigens is performed

  12. "Enzyme-Linked Immunotransfer Blot Analysis of Somatic and Excretory- Secretory Antigens of Fasciola hepatica in Diagnosis of Human Fasciolosis"

    Directory of Open Access Journals (Sweden)

    MB Rokni

    2004-07-01

    Full Text Available The liver fluke Fasciola hepatica causes fascioliasis, a liver disease in most part of the world and particularly in north of Iran. Diagnosis of the diseases is anchored in coprological manner but serological methods are preferable due to some obscurities. In this study, sera obtained from human patients infected with Fasciola hepatica were tested by the enzymelinked immunotrotransfer blot (EITB technique with the parasite s somatic and excretory-secretory (ES antigens in order to evaluate the diagnostic potential of the assay. The study included sera from 40 patients infected with F. hepatica, 20 infected with hydatidosis, 6 with toxocariasis, 10 with strongyloidiasis, 10 with amoebiasis, 5 with malaria and 30 normal controls. By this assay, most pf the serum samples from humans with fascioliasis recognized two antigenic polypeptides of 27 and 29 kDa using both antigens. The sensitivity, specificity, positive and negative predictive values for somatic antigen were 91.0%, 96.2%, 95.2% and 92.7% respectively, while these parameters as for ES antigen were 95.2%, 98.0%, 97.5% and 96.2%, correspondingly. Totally, two cases of reactions for the first antigen and one for the latter were verified. The study suggests that the 27 and 29 kDa bands for two antigens in EITB test could be considered for the immunodiagnosis of human fascioliasis.

  13. The diagnosis of proventricular dilatation disease: use of a Western blot assay to detect antibodies against avian Borna virus.

    Science.gov (United States)

    Villanueva, Itamar; Gray, Patricia; Mirhosseini, Negin; Payne, Susan; Hoppes, Sharman; Honkavuori, Kirsi S; Briese, Thomas; Turner, Debra; Tizard, Ian

    2010-07-14

    Avian Borna virus (ABV) has recently been shown to be the causal agent of proventricular dilatation disease (PDD) a lethal neurologic disease of captive psittacines and other birds. An immunoblot assay was used to detect the presence of antibodies against avian Borna virus in the serum of affected birds. A lysate from ABV-infected duck embryo fibroblasts served as a source of antigen. The assay was used to test for the presence of antibodies to ABV in 117 birds. Thirty of these birds had biopsy or necropsy-confirmed proventricular dilatation disease (PDD), while the remaining 87 birds were apparently healthy or were suffering from diseases other than PDD. Sera from 27 of the 30 PDD cases (90%) contained antibodies to ABV. Seventy-three (84%) of the apparently "healthy" birds were seronegative. Additionally, sera from seven macaws and one parrot trapped in the Peruvian Amazon were seronegative. Positive sera recognized the bornaviral nucleoprotein (N-protein). While the presence of antibodies to ABV largely corresponded with the development of clinical PDD, 14 apparently healthy normal birds possessed detectable antibodies to ABV. The existence of a carrier state was confirmed when 13 of 15 apparently healthy cockatiels were shown by PCR to have detectable ABV RNA in their feces. Western blot assays may be of significant assistance in diagnosing proventricular dilatation disease. Many apparently healthy birds may however be seronegative while, at the same time, shedding ABV in their feces. PMID:20036080

  14. Patterns of Limnohabitans microdiversity across a large set of freshwater habitats as revealed by Reverse Line Blot Hybridization.

    Directory of Open Access Journals (Sweden)

    Jan Jezbera

    Full Text Available Among abundant freshwater Betaproteobacteria, only few groups are considered to be of central ecological importance. One of them is the well-studied genus Limnohabitans and mainly its R-BT subcluster, investigated previously mainly by fluorescence in situ hybridization methods. We designed, based on sequences from a large Limnohabitans culture collection, 18 RLBH (Reverse Line Blot Hybridization probes specific for different groups within the genus Limnohabitans by targeting diagnostic sequences on their 16 S-23 S rRNA ITS regions. The developed probes covered in sum 92% of the available isolates. This set of probes was applied to environmental DNA originating from 161 different European standing freshwater habitats to reveal the microdiversity (intra-genus patterns of the Limnohabitans genus along a pH gradient. Investigated habitats differed in various physicochemical parameters, and represented a very broad range of standing freshwater habitats. The Limnohabitans microdiversity, assessed as number of RLBH-defined groups detected, increased significantly along the gradient of rising pH of habitats. 14 out of 18 probes returned detection signals that allowed predictions on the distribution of distinct Limnohabitans groups. Most probe-defined Limnohabitans groups showed preferences for alkaline habitats, one for acidic, and some seemed to lack preferences. Complete niche-separation was indicated for some of the probe-targeted groups. Moreover, bimodal distributions observed for some groups of Limnohabitans, suggested further niche separation between genotypes within the same probe-defined group. Statistical analyses suggested that different environmental parameters such as pH, conductivity, oxygen and altitude influenced the distribution of distinct groups. The results of our study do not support the hypothesis that the wide ecological distribution of Limnohabitans bacteria in standing freshwater habitats results from generalist adaptations of

  15. Evaluation of a Western Blot and ELISA for the detection of anti-Trichinella-IgG in pig sera.

    Science.gov (United States)

    Nöckler, K; Reckinger, S; Broglia, A; Mayer-Scholl, A; Bahn, P

    2009-08-26

    Human trichinellosis is a foodborne disease caused by ingestion of infective Trichinella muscle larvae via pork or meat of other food animals which are susceptible to this zoonotic parasite. There are new approaches for a risk-oriented meat inspection for Trichinella in pigs which are accompanied by monitoring programmes on herd level to control freedom from this parasite. For this purpose, testing schemes utilizing serological tests with a high sensitivity and specificity are required. This study aimed at the evaluation of an ELISA and a Western Blot (WB) for the detection of anti-Trichinella-IgG in terms of sensitivity and specificity taking results of artificial digestion as gold standard. For this purpose, 144 field sera from pigs confirmed as Trichinella-free as well as 159 sera from pigs experimentally infected with T. spiralis (123), T. britovi (19) or T. pseudospiralis (17) were examined by ELISA (excretory-secretory antigen) and WB (crude worm extract). Sera from pigs experimentally infected with four other nematode species were included to investigate the cross-reactivity of the antigen used in the WB. For all Trichinella-positive pig sera, band pattern profiles were identified in the WB and results were analysed in relation to ELISA OD% values. Testing of pig sera revealed a sensitivity of 96.8% for the ELISA and 98.1% for the WB whereas the methods showed a specificity of 97.9 and 100%, respectively. WB analysis of Trichinella-positive pig sera revealed five specific band patterns of 43, 47, 61, 66, and 102 kDa of which the 43 kDa protein was identified as the predominant antigen. The frequency of the band pattern profile was irrespective of the dose and the period of infection as well as the Trichinella species investigated. In conclusion, monitoring in swine farms for Trichinella antibodies should be based on screening pig sera by means of ELISA followed by confirmatory testing through WB analysis. PMID:19473770

  16. State-of-the-art housekeeping proteins for quantitative western blotting: Revisiting the first draft of the human proteome.

    Science.gov (United States)

    Lee, Hyun-Gwan; Jo, Jihoon; Hong, Hyun-Hee; Kim, Kee K; Park, Joong-Ki; Cho, Sung-Jin; Park, Chungoo

    2016-07-01

    Western blotting (WB) analysis is the most popular and widely used methodology for protein detection and characterization over recent decades. In accordance with the advancement of the technologies for the acquisition of WB signals, a quantitative value is used to present the abundance of target proteins in a complex sample, thereby requiring the use of specific proteins as internal references that represent total proteins. Heretofore, proteins encoded by housekeeping genes such as GAPDH, β-tubulin and β-actin have been commonly used as loading controls without any hesitation because their mRNA expression levels tend to be high and constant in many different cells and tissues. Experimentally, however, some of the housekeeping reference proteins are often displayed with inconsistent expression levels in both homogeneous and heterogeneous tissues, and, in terms of mRNA levels, they have a weak correlation to the abundance of proteins. To estimate accurate, reliable, and reproducible protein quantifications, it is crucial to define appropriate reference controls. For this paper, we explored the recently released large-scale, human proteomic database ProteomicsDB including 16 857 liquid chromatography tandem-mass-spectrometry data from 27 human tissues, and suggest 20 ubiquitously- and constitutively-expressed, putative internal-reference controls for the quantification of differential protein expressions. Intriguingly, the most commonly used, known housekeeping genes were entirely excluded in our newly defined candidates. Although the applications of the candidates under many different biological conditions and in other organisms are yet to be empirically verified, we propose reliable, potential loading controls for a WB analysis in this paper. PMID:27125885

  17. Reduction of telomeric repeats as a possible predictor for development of hepatocellular carcinoma: convenient evaluation by slot-blot analysis.

    Science.gov (United States)

    Isokawa, O; Suda, T; Aoyagi, Y; Kawai, H; Yokota, T; Takahashi, T; Tsukada, K; Shimizu, T; Mori, S; Abe, Y; Suzuki, Y; Nomoto, M; Mita, Y; Yanagi, M; Igarashi, H; Asakura, H

    1999-08-01

    Hepatocellular carcinoma (HCC) mainly arises from the liver with chronic inflammation. Because telomere reduction reflects replicative history in somatic cells, we analyzed the possibility that liver tissues surrounding HCC consist of the cells carrying substantial reduction of telomere. We studied 20 HCC and surrounding noncancerous liver tissues (SL) obtained by surgical resection, and 10 laparoscopically obtained needle biopsy specimens of the liver with chronic inflammation including no overt HCC (CI). Five liver tissues without chronic liver diseases (ND) were also examined. Extracted genomic DNAs were blotted on a nylon membrane, and probed at first with radio-labeled d(TTAGGG)(3) and reprobed with radio-labeled d(CCT)(7). The intensity caused by d(TTAGGG)(3) was divided by that of d(CCT)(7). The ratio was defined as telomeric repeats content (TC). Dilution experiments reproducibly revealed almost the same TC. The reduction rate of telomere length through aging estimated by regression analysis of TC was 0.62% per year. Concomitant analyses of TC and average telomere length revealed that both values were significantly correlated (r =.45; P =.009). To compare TC in the liver with respect to chronic inflammation, the value was divided by TC in peripheral blood leukocytes (PBL) from the same donor. The ratio was defined as relative TC (RTC). There was a statistically significant decrease of RTC in CI compared with that in ND (P =.03). Furthermore, RTC in SL was significantly lower than that in CI (P =.0001). These observations suggest that RTC value in liver tissues may digitally indicate a replicative history of hepatocytes under chronic inflammation, and a risk of HCC development. PMID:10421648

  18. Detection of lipopolysaccharides in Polyacrylamide gels by transfer to nitrocellulose followed by immunoautoradiography with antibody and 125I-protein A: LPS blotting

    International Nuclear Information System (INIS)

    Lipopolysaccharides (LPS), which constitute the somatic (O) antigen of gram-negative bacteria, were used to demonstrate the procedure of LPS blotting involving the electrophoretic transfer of electrophoretically resolved LPS from sodium dodecyl sulfate-polyacrylamide gels to nitrocellulose filters. Immobilized LPS could then be immunoautoradiographically visualized in situ by reaction with specific anti-LPS antibody and subsequent binding of radioiodinated Staphylococcus protein A. LPS blotting is expected to provide an efficient and specific means of investigating the LPS (O) antigens of gram-negative bacteria. 18 references

  19. Identification of recombinant human EPO variants in greyhound plasma and urine by ELISA, LC-MS/MS and western blotting: a comparative study.

    Science.gov (United States)

    Timms, Mark; Steel, Rohan; Vine, John

    2016-02-01

    The recombinant human erythropoietins epoetin alfa (Eprex®), darbepoetin (Aranesp®) and methoxy polyethylene glycol-epoetin beta (Mircera®) were administered to greyhounds for 7, 10 and 14 days respectively. Blood and urine samples were collected and analysed for erythropoietin by ELISA, LC-MS/MS and western blotting. Limits of confirmation in plasma for western blotting and LC-MS/MS methods ranged from a low of 2.5mIU/mL, and closely matched the sensitivity of ELISA screening. PMID:26290355

  20. Evaluation of two sets of immunohistochemical and Western blot confirmatory methods in the detection of typical and atypical BSE cases

    Directory of Open Access Journals (Sweden)

    Greenlee Justin J

    2011-09-01

    Full Text Available Abstract Background Three distinct forms of bovine spongiform encephalopathy (BSE, defined as classical (C-, low (L- or high (H- type, have been detected through ongoing active and passive surveillance systems for the disease. The aim of the present study was to compare the ability of two sets of immunohistochemical (IHC and Western blot (WB BSE confirmatory protocols to detect C- and atypical (L- and H-type BSE forms. Obex samples from cases of United States and Italian C-type BSE, a U.S. H-type and an Italian L-type BSE case were tested in parallel using the two IHC sets and WB methods. Results The two IHC techniques proved equivalent in identifying and differentiating between C-type, L-type and H-type BSE. The IHC protocols appeared consistent in the identification of PrPSc distribution and deposition patterns in relation to the BSE type examined. Both IHC methods evidenced three distinct PrPSc phenotypes for each type of BSE: prevailing granular and linear tracts pattern in the C-type; intraglial and intraneuronal deposits in the H-type; plaques in the L-type. Also, the two techniques gave comparable results for PrPSc staining intensity on the C- and L-type BSE samples, whereas a higher amount of intraglial and intraneuronal PrPSc deposition on the H-type BSE case was revealed by the method based on a stronger demasking step. Both WB methods were consistent in identifying classical and atypical BSE forms and in differentiating the specific PrPSc molecular weight and glycoform ratios of each form. Conclusions The study showed that the IHC and WB BSE confirmatory methods were equally able to recognize C-, L- and H-type BSE forms and to discriminate between their different immunohistochemical and molecular phenotypes. Of note is that for the first time one of the two sets of BSE confirmatory protocols proved effective in identifying the L-type BSE form. This finding helps to validate the suitability of the BSE confirmatory tests for BSE

  1. Southern (In)hospitality

    Science.gov (United States)

    Hamilton, Kendra

    2005-01-01

    This article presents the results of "The Status of Race Equity and Diversity in Public Higher Education in the South," an analysis of trends in admissions, enrollment and completion at public colleges and universities in the 19 Southern and border states that maintained segregated systems of higher education in 1954. While work on the project…

  2. Detection of H pylori infection by ELISA and Western blot techniques and evaluation of anti CagA seropositivity in adult Turkish dyspeptic patients

    Institute of Scientific and Technical Information of China (English)

    (O)zlem Yilmaz; Nazime (S)en; Ahmet Ali Küpelio(g)lu; (I)lkay (S)im(s)ek

    2006-01-01

    AIM: To detect H pylori infection and to evaluate the anti CagA seropositivity in adult Turkish dyspeptic patients. METHODS: We evaluated anti-H pylori IgA, IgG and anti-CagA antibodies using commercial enzyme-linked immunoassay (ELISA) and Western blot in dyspeptic Turkish patients. H pylori status was determined by histology and rapid urease testing.RESULTS: Fifty-six patients were entered. Forty-eight (85.7%) out of the 56 patients were positive for H pylori.H pylori IgG seropositivity was 82.1%, IgA seropositivity 48.2%. CagA ELISA showed that IgG was positive in 50% and IgA in 30.4% of those with H pylori infections.Western blot showed that IgG seropositivity was 80.4%and IgA seropositivity 33.9%. Western blot detected IgG antibodies with reactivity to CagA in 50%, VacA in 62.5%, UreB in 87.5%, UreA in 80.4%, and OMP in 57.1%. None of the tests had a sensitivity and specificity above 80%.CONCLUSION: None of these commercial tests seems clinically useful for H pylori detection in adult dyspeptic patients, while Western blot can give seropositivity and determine anti-CagA, VacA virulence factor status of Turkish dyspeptic patients in the Izmir region.

  3. Resolution and identification of major peanut allergens using a combination of fluorescence two-dimensional differential gel electrophoresis, western blotting and Q-TOF mass spectrometry.

    Science.gov (United States)

    Peanut allergy is triggered by several proteins known as allergens. The matching resolution and identification of major peanut allergens in 2D protein maps, was accomplished by the use of fluorescence two-dimensional differential gel electrophoresis (2D DIGE), Western blotting and quadrupole time-of...

  4. The Oratory of Southern Demagogues.

    Science.gov (United States)

    Logue, Cal M., Ed.; Dorgan, Howard, Ed.

    This book examines the rhetorical strategies of influential southern United States politicians, termed "southern demagogues," and their particular appeal to the poor working class whites of the South during the early twentieth century. Following an introductory chapter that discusses the origins of the southern demagogue, the remaining chapters…

  5. Astrophysics in Southern Africa

    CERN Document Server

    Whitelock, Patricia A

    2007-01-01

    The government of South Africa has identified astronomy as a field in which their country has a strategic advantage and is consequently investing very significantly in astronomical infrastructure. South Africa now operates a 10-m class optical telescope, the Southern African Large Telescope (SALT), and is one of two countries short listed to host the Square Kilometre Array (SKA), an ambitious international project to construct a radio telescope with a sensitivity one hundred times that of any existing telescope. The challenge now is to produce an indigenous community of users for these facilities, particularly from among the black population which was severely disadvantaged under the apartheid regime. In this paper I briefly describe the observing facilities in Southern Africa before going on to discuss the various collaborations that are allowing us to use astronomy as a tool for development, and at the same time to train a new generation of astronomers who will be well grounded in the science and linked to ...

  6. Accretion of southern Alaska

    Science.gov (United States)

    Hillhouse, J.W.

    1987-01-01

    Paleomagnetic data from southern Alaska indicate that the Wrangellia and Peninsular terranes collided with central Alaska probably by 65 Ma ago and certainly no later than 55 Ma ago. The accretion of these terranes to the mainland was followed by the arrival of the Ghost Rocks volcanic assemblage at the southern margin of Kodiak Island. Poleward movement of these terranes can be explained by rapid motion of the Kula oceanic plate, mainly from 85 to 43 Ma ago, according to recent reconstructions derived from the hot-spot reference frame. After accretion, much of southwestern Alaska underwent a counterclockwise rotation of about 50 ?? as indicated by paleomagnetic poles from volcanic rocks of Late Cretaceous and Early Tertiary age. Compression between North America and Asia during opening of the North Atlantic (68-44 Ma ago) may account for the rotation. ?? 1987.

  7. Combined Detection of Breast Cancer Micrometastases in the Lymph Nodes and Bone Marrow Using Reverse-transcriptase chain Reaction and Southern Hybridization

    Institute of Scientific and Technical Information of China (English)

    2000-01-01

    The presence of lymph nodes and bone marrow micrometastases of patients with breast carcinoma by immunohistochemistry (IHC) methods has been strongly correlated to early recurrence and shorter overall survival. The aim of this study was to detect micrometastases in matched sample pairs of lymph nodes and the bone marrow of primary breast cancer patients using a more sensitive method, and compare with other clinical parameters. Methods: Cytokeratin 19 (CK-19) gene mRNA expression was detected by reverse transcriptase-polymerase chain reaction (RT-PCR) and Southern blot hybridization. Human breast cancer cell line T47D was mixed with bone marrow cells at different proportions. The positive detection rate was compared among RT-PCR, Southern blotting and IHC methods. Results: Cytokeratin 19 gene was expressed in all 6 positive control samples, while the expression wasn't seen in 18 negative control samples. CK-19 IHC positive cells were detected at a dilution of one T47D cell in 5×105 bone marrow cells, while the sensitivity detected by PCR and Southern blot hybridization was at 1:5′ 104 and 1:106, respectively. In the samples from the 35 patients, we found CK-19 positive cells in 2 cases (5.7%) by IHC. CK-19 gene expression signal was detected in 14/35 (40%) by RT-PCR,and 17/35 (48.6%) by southern blotting. Four cases were micrometastases positive both in lymph node and bone marrow (11.4%). There was no correlation between CK-1 9 detection and other clinical parameters. Conclusion: combined detection of micrometastases in lymph node and bone marrow by RT-PCR and Southern blotting, using CK-19 as a biological marker, is a highly sensitive method for breast cancer.

  8. Dual infection of chickens with pox and infectious laryngotracheitis (ILT) confirmed with specific pox and ILT DNA dot-blot hybridization assays.

    Science.gov (United States)

    Fatunmbi, O O; Reed, W M; Schwartz, D L; Tripathy, D N

    1995-01-01

    Dual infection with fowl pox (FP) and infectious laryngotracheitis (ILT) was diagnosed as the cause of acute mortality in a flock of three age groups of Hy-Line leghorn layers. The affected chickens had not been previously vaccinated against either FP or ILT. The diagnosis was confirmed by virus isolation, histopathology, and the use of specific pox and ILT genomic DNA probes in a dot-blot hybridization assay. FP and ILT vaccinations were recommended to control mortality. The use of FP- and ILT-specific DNA dot-blot hybridization may be used as a routine diagnostic tool to differentiate between the two diseases, especially in atypical cases of either infection or to confirm the existence of the two diseases as a mixed infection in a flock of chickens. PMID:8719232

  9. Characterization of Sm14 related components in different helminths by sodium dodecyl sulphate-polyacrylamide gel electrophoresis and Western blotting analysis

    Directory of Open Access Journals (Sweden)

    Nilton Thaumaturgo

    2002-10-01

    Full Text Available Sm14 was the first fatty acid-binding protein homologue identified in helminths. Thereafter, members of the same family were identified in several helminth species, with high aminoacid sequence homology between them. In addition, immune crossprotection was also reported against Fasciola hepatica infection, in animals previously immunized with the Schistosoma mansoni vaccine candidate, r-Sm14. In the present study, data on preliminary sodium dodecyl sulphate-polyacrylamide gel electrophoresis and Western blotting analysis of nine different helminth extracts focusing the identification of Sm14 related proteins, is reported. Out of these, three extracts - Ascaris suum (males and females, Echinostoma paraensei, and Taenia saginata - presented components that comigrated with Sm14 in SDS-PAGE, and that were recognized by anti-rSm14 policlonal serum, in Western blotting tests.

  10. Comparison of immunoperoxidase staining with indirect immunofluorescence, ELISA, and Western blotting assays for detecting anti-HTLV-I antibodies in systemic lupus erythematosus.

    OpenAIRE

    K. Yamaguchi; Matutes, E; Kiyokawa, T.; Nishimura, Y.; Ishii, T.; Takatsuki, K.; Catovsky, D

    1988-01-01

    Serum antibodies against human T cell leukaemia virus type I (HTLV-I) were investigated in 12 patients by four methods: indirect immunoperoxidase staining, indirect immunofluorescence, enzyme linked immunosorbent assay (ELISA), and strip radioimmunoassay based on the Western blotting assay. Seven patients had systemic lupus erythematosus (SLE) and five various autoimmune diseases with one or more circulating autoantibodies. Serum samples from three patients were found to be HTLV-I-positive by...

  11. Mycoplasma agassizii strain variation and distinct host antibody responses explain differences between enzyme-linked immunosorbent assays and Western blot assays.

    Science.gov (United States)

    Wendland, Lori D; Klein, Paul A; Jacobson, Elliott R; Brown, Mary B

    2010-11-01

    The precarious status of desert (Gopherus agassizii) and gopher (G. polyphemus) tortoises has resulted in conservation efforts that now include health assessment as an important component of management decision-making. Mycoplasmal upper respiratory tract disease (URTD) is one of very few diseases in chelonians for which comprehensive and rigorously validated diagnostic tests exist. In this study, serum samples obtained from eight Gopherus tortoises documented at necropsy to (i) be enzyme-linked immunosorbent assay (ELISA) seropositive using the PS6 antigen, (ii) be infected with Mycoplasma agassizii as indicated by direct isolation of the pathogen from the respiratory surfaces, and (iii) have histological lesions of mycoplasmal URTD were used to evaluate four distinct clinical isolates of M. agassizii as antigens for ELISA and Western blot analyses. Each animal sample reacted in the Western blot with its homologous M. agassizii strain, but recognition of heterologous M. agassizii strains was variable. Further, individual animals varied significantly with respect to the specific proteins recognized by the humoral immune response. An additional 114 Gopherus serum samples were evaluated using ELISA antigens prepared from the four distinct M. agassizii strains; A₄₀₅ values were significantly correlated (r² goodness of fit range, 0.708 to 0.771; P < 0.0001) for all antigens tested. The results confirm that strain variation is responsible for the observed differences between Western blot binding patterns. Thus, reliance on a single M. agassizii strain as an antigen in Western blot assays may provide false-negative results. This could have adverse consequences for the well-being of these environmentally sensitive hosts if false-negative animals were relocated to sites consisting of true-negative populations. PMID:20810678

  12. Mycoplasma agassizii Strain Variation and Distinct Host Antibody Responses Explain Differences between Enzyme-Linked Immunosorbent Assays and Western Blot Assays ▿

    Science.gov (United States)

    Wendland, Lori D.; Klein, Paul A.; Jacobson, Elliott R.; Brown, Mary B.

    2010-01-01

    The precarious status of desert (Gopherus agassizii) and gopher (G. polyphemus) tortoises has resulted in conservation efforts that now include health assessment as an important component of management decision-making. Mycoplasmal upper respiratory tract disease (URTD) is one of very few diseases in chelonians for which comprehensive and rigorously validated diagnostic tests exist. In this study, serum samples obtained from eight Gopherus tortoises documented at necropsy to (i) be enzyme-linked immunosorbent assay (ELISA) seropositive using the PS6 antigen, (ii) be infected with Mycoplasma agassizii as indicated by direct isolation of the pathogen from the respiratory surfaces, and (iii) have histological lesions of mycoplasmal URTD were used to evaluate four distinct clinical isolates of M. agassizii as antigens for ELISA and Western blot analyses. Each animal sample reacted in the Western blot with its homologous M. agassizii strain, but recognition of heterologous M. agassizii strains was variable. Further, individual animals varied significantly with respect to the specific proteins recognized by the humoral immune response. An additional 114 Gopherus serum samples were evaluated using ELISA antigens prepared from the four distinct M. agassizii strains; A405 values were significantly correlated (r2 goodness of fit range, 0.708 to 0.771; P < 0.0001) for all antigens tested. The results confirm that strain variation is responsible for the observed differences between Western blot binding patterns. Thus, reliance on a single M. agassizii strain as an antigen in Western blot assays may provide false-negative results. This could have adverse consequences for the well-being of these environmentally sensitive hosts if false-negative animals were relocated to sites consisting of true-negative populations. PMID:20810678

  13. Western blot analyses of measles virus antibody in normal persons and in patients with multiple sclerosis, subacute sclerosing panencephalitis, or atypical measles.

    OpenAIRE

    Hankins, R W; Black, F L

    1986-01-01

    A version of the Western blot was developed to detect serum antibodies against measles virus polypeptides. With this technique, a seroepidemiological survey of antibodies to the several measles virus proteins in diverse measles-related conditions was conducted. The sera were obtained from individuals with a recent or long-past history of natural measles, from persons with a history of immunization with live attenuated measles vaccine, and from patients with multiple sclerosis, subacute sclero...

  14. Glycoproteins from the cuticle of the Atlantic shore crab Carcinus maenas: I. Electrophoresis and Western-blot analysis by use of lectins

    OpenAIRE

    Compère, P.; Jaspar-Versali, M.-F.; Goffinet, G.

    2002-01-01

    The protein and glycoprotein content of four different neutral or acidic solvent extracts (0.5 M KCl, 10% EDTA, 0.1 N HCI, or 2% acetic acid) from the mineralized exoskeleton of a decapod crustacean, the Atlantic shore crab Carcinus maenas, were characterized by quantitative analysis of proteins, SDS-PAGE analysis, and probing with lectins on blots. The lectins used were Conconavalin A, Jacalin, soybean agglutinin, Maackia amurensis agglutinin II, and Sambucus nigra agglutinin. The results sh...

  15. The gene encoding vitamin K-dependent anticoagulant protein S is expressed in multiple rabbit organs as demonstrated by northern blotting, in situ hybridization, and immunohistochemistry.

    Science.gov (United States)

    He, X; Shen, L; Bjartell, A; Dahlbäck, B

    1995-01-01

    Vitamin K-dependent protein S is an anticoagulant plasma protein that functions as a co-factor to activated protein C in the degradation of coagulation factors Va and VIIIa. We investigated the tissue/cellular distribution of protein S synthesis by Northern blotting, in situ hybridization, and immunohistochemistry. Northern blotting together with in situ hybridization, using specific oligodeoxynucleotide probes, demonstrated protein S mRNA in liver, lung, testis, epididymis, ovary, uterus, and brain. In the reproductive system, protein S mRNA was present in the cytoplasm of Leydig cells, interstitial cells of the ovary, epithelial cells of the epididymis, and in the endometrium, including endometrial mucous glandular membrane in the myometrium. Bronchial epithelial cells and alveolar macrophages were positive in the respiratory system. In the central nervous system, pyramidal neurons in the cerebral cortex and in the hippocampal region, and dentate fascia neurons gave strongly positive signals. Immunohistochemistry with monoclonal antibodies yielded a staining pattern that correlated well with results of in situ hybridization. In conclusion, results from Northern blotting, in situ hybridization, and immunohistochemistry suggested that rabbit protein S is expressed in several extrahepatic tissues. The presence of protein S transcripts in these fully differentiated cells suggests a cell type-specific gene expression which may be related to local anticoagulation or to other as yet unknown protein S functions. PMID:7822769

  16. Detection of KatG Gen Mutation on Mycobacterium Tuberculosis by Means of PCR-Dot Blot Hybridization with 32P Labeled Oligonucleotide Probe Methods

    International Nuclear Information System (INIS)

    Handling and controlling of tuberculosis, a disease caused by Mycobacterium tuberculosis (MTB), is now complicated since there are many MTBs that are resistant against anti-tuberculosis drugs such as isoniazid. The drug resistance could occurred due to the inadequate and un-regular drug utilization that cause gene mutation of the drug target such as katG gene for isoniazid. The molecular biology techniques such as the PCR- dot blot hybridization with radioisotope (32P) labeled oligonucleotide probe, has been reported as a technique that is more sensitive and rapid for detection of gene mutations related with drug resistances. Hence, the aim of this study was to apply the PCR- dot blot hybridization technique using 32P labeled oligonucleotide probe for detection of single mutation at codon 315 of katG gene of MTBs that rise the isoniazid resistance. In this study, we used 89 sputum specimens and a standard MTB (MTB H37RV) as a control. DNA extractions were performed by the BOOM method and the phenol chloroform for sputum samples and standard MTB, respectively. Primers used for PCR technique were Pt8 and Pt9 and RTB59 and RTB36 for detecting tuberculosis causing Mycobacterium and the existence of katG gene, respectively. Both of the primers are specific for IS6110 region and katG gene, respectively. PCR products were detected by an agarose gel electrophoresis technique. Dot blot hybridization with 32P-oligonucleotide probe 315mu was performed to detect mutation at codon 315 of tested samples. Results of the PCR using primer Pt8 and Pt9 showed that all sputum specimens had positive results. Mutation detection by PCR- dot blot hybridization with 32P-oligonucleotide probe 315mu, revealed that 11 of 89 tested samples had a mutation at their codon 315 of katG gene. Based upon these results, it is concluded that PCR-dot blot hybridization with 32P-oligonucleotide probe is a technique that is rapid and highly specific and sensitive for detection of mutation at codon 315 of

  17. The Southern Ocean Observing System

    OpenAIRE

    Rintoul, Stephen R.; Meredith, Michael P.; Schofield, Oscar; Newman, Louise

    2012-01-01

    The Southern Ocean includes the only latitude band where the ocean circles the earth unobstructed by continental boundaries. This accident of geography has profound consequences for global ocean circulation, biogeochemical cycles, and climate. The Southern Ocean connects the ocean basins and links the shallow and deep limbs of the overturning circulation (Rintoul et al., 2001). The ocean's capacity to moderate the pace of climate change is therefore influenced strongly by the Southern Ocean's...

  18. Cold War in Southern Africa

    OpenAIRE

    Matthew Graham

    2010-01-01

    Review Article: Cold War in Southern Africa Gary Baines, Peter Vale (eds.) (2008), Beyond the Border War: New Perspectives on Southern Africa’s Late-Cold War Conflicts , Pretoria: Unisa Press, ISBN 978 1 86888 456 8, xix + 342 pp. Sue Onslow (ed.) (2009), Cold War in Southern Africa: White Power, Black Liberation , Abingdon: Routledge, ISBN 978 0 415 47420 7, 253 pp. Vladimir Shubin (2008), The Hot “Cold War†: The USSR in Southern Africa , London: Pluto Press, ISBN 978 0745324722, 320 p...

  19. Southern Ocean eddy phenomenology

    Science.gov (United States)

    Frenger, I.; Münnich, M.; Gruber, N.; Knutti, R.

    2015-11-01

    Mesoscale eddies are ubiquitous features in the Southern Ocean, yet their phenomenology is not well quantified. To tackle this task, we use satellite observations of sea level anomalies and sea surface temperature (SST) as well as in situ temperature and salinity measurements from profiling floats. Over the period 1997-2010, we identified over a million mesoscale eddy instances and were able to track about 105 of them over 1 month or more. The Antarctic Circumpolar Current (ACC), the boundary current systems, and the regions where they interact are hot spots of eddy presence, representing also the birth places and graveyards of most eddies. These hot spots contrast strongly to areas shallower than about 2000 m, where mesoscale eddies are essentially absent, likely due to topographical steering. Anticyclones tend to dominate the southern subtropical gyres, and cyclones the northern flank of the ACC. Major causes of regional polarity dominance are larger formation numbers and lifespans, with a contribution of differential propagation pathways of long-lived eddies. Areas of dominance of one polarity are generally congruent with the same polarity being longer-lived, bigger, of larger amplitude, and more intense. Eddies extend down to at least 2000 m. In the ACC, eddies show near surface temperature and salinity maxima, whereas eddies in the subtropical areas generally have deeper anomaly maxima, presumably inherited from their origin in the boundary currents. The temperature and salinity signatures of the average eddy suggest that their tracer anomalies are a result of both trapping in the eddy core and stirring.

  20. Glycophospholipid Formulation with NADH and CoQ10 Significantly Reduces Intractable Fatigue in Western Blot-Positive ‘Chronic Lyme Disease’ Patients: Preliminary Report

    Directory of Open Access Journals (Sweden)

    Garth L. Nicolson

    2012-03-01

    Full Text Available Background: An open label 8-week preliminary study was conducted in a small number of patients to determine if a combination oral supplement containing a mixture of phosphoglycolipids, coenzyme Q10 and microencapsulated NADH and other nutrients could affect fatigue levels in long-term, Western blot-positive, multi-symptom ‘chronic Lyme disease’ patients (also called ‘post-treatment Lyme disease’ or ‘post Lyme syndrome’ with intractable fatigue. Methods: The subjects in this study were 6 males (mean age = 45.1 ± 12.4 years and 10 females (mean age = 54.6 ± 7.4 years with ‘chronic Lyme disease’ (determined by multiple symptoms and positive Western blot analysis that had been symptomatic with chronic fatigue for an average of 12.7 ± 6.6 years. They had been seen by multiple physicians (13.3 ± 7.6 and had used many other remedies, supplements and drugs (14.4 ± 7.4 without fatigue relief. Fatigue was monitored at 0, 7, 30 and 60 days using a validated instrument, the Piper Fatigue Scale.Results: Patients in this preliminary study responded to the combination test supplement, showing a 26% reduction in overall fatigue by the end of the 8-week trial (p< 0.0003. Analysis of subcategories of fatigue indicated that there were significant improvements in the ability to complete tasks and activities as well as significant improvements in mood and cognitive abilities. Regression analysis of the data indicated that reductions in fatigue were consistent and occurred with a high degree of confidence (R2= 0.998. Functional Foods in Health and Disease 2012, 2(3:35-47 Conclusions: The combination supplement was a safe and effective method to significantly reduce intractable fatigue in long-term patients with Western blot-positive ‘chronic Lyme disease.’

  1. MicroRNA fate upon targeting with anti-miRNA oligonucleotides as revealed by an improved Northern-blot-based method for miRNA detection

    OpenAIRE

    Torres, Adrian G.; Fabani, Martin M.; Vigorito, Elena; Gait, Michael J.

    2011-01-01

    MicroRNAs (miRNAs) are small non-coding RNAs involved in fine-tuning of gene regulation. Antisense oligonucleotides (ONs) are promising tools as anti-miRNA (anti-miR) agents toward therapeutic applications and to uncover miRNA function. Such anti-miR ONs include 2′-O-methyl (OMe), cationic peptide nucleic acids like K-PNA-K3, and locked nucleic acid (LNA)-based anti-miRs such as LNA/DNA or LNA/OMe. Northern blotting is a widely used and robust technique to detect miRNAs. However, miRNA quanti...

  2. Use of the water-soluble fluor sodium salicylate for fluorographic detection of tritium in thin-layer chromatograms and nitrocellulose blots

    International Nuclear Information System (INIS)

    We have determined that sodium salicylate, a water-soluble fluor which we use routinely for fluorography with polyacrylamide gels, is also useful for fluorography with thin-layer media. Detection of 3H-labeled material applied to thin-layer chromatography plates, or nitrocellulose membranes, can be enhanced up to 150-fold after treatment with an aqueous solution of 2 M sodium salicylate, while detection of 35S-labeled material is enhanced only about 2-fold. We demonstrate the utility of sodium salicylate fluorography in detecting 3H-labeled palmitic acid following thin-layer chromatography and 3H-labeled proteins following blotting to nitrocellulose

  3. Localization and Distribution of 'Candidatus Liberibacter asiaticus’ in Citrus and Periwinkle by Direct Tissue Blot Immuno Assay with an Anti-OmpA Polyclonal Antibody

    OpenAIRE

    Ding, Fang; Duan, Yongping; Paul, Cristina; Brlansky, Ronald H.; Hartung, John S.

    2015-01-01

    ‘Candidatus Liberibacter asiaticus’ (CaLas), a non-cultured member of the α-proteobacteria, is the causal agent of citrus Huanglongbing (HLB). Due to the difficulties of in vitro culture, antibodies against CaLas have not been widely used in studies of this pathogen. We have used an anti-OmpA polyclonal antibody based direct tissue blot immunoassay to localize CaLas in different citrus tissues and in periwinkle leaves. In citrus petioles, CaLas was unevenly distributed in the phloem sieve tub...

  4. APPLICATION OF WESTERN BLOTTING TECHNIQUE FOR EVALUATING THE EXPRESSION OF VASOPRESSIN RECEPTORS IN THE HEART CELLS; IMPORTANCE IN THE CARDIOVASCULAR SYSTEM

    Directory of Open Access Journals (Sweden)

    Manoj G Tyagi

    2012-08-01

    Full Text Available Vasopressin, a posterior pituitary hormone is responsible for water reabsorption by the kidneys and maintenance of cardio-vascular homeostasis. Vasopressin receptors are characterized as VR 1 (V1a, VR2 (V2, and VR3 (V1b. VR1, which is abundant in vascular smooth muscles, causes vasoconstriction by increasing intracellular calcium via the phosphatidylinositol bisphosphonate pathway and a positive inotropic effect in cardiac muscle. VR2 has also been shown to be expressed in the heart. There is emerging role for vasopressin receptors in health and disease. This study describes the application of Western blotting to elucidate the importance of vasopressin receptors in the heart cells.

  5. Evaluación de la técnica Western blot para la detección de antígenos de Hymenolepis nana

    OpenAIRE

    Flora Chávez-Salas; Olenka Vásquez; Hermes Escalante

    2013-01-01

    Este trabajo tuvo como objetivo evaluar la técnica de inmunoelectrotransferencia (Western Blot) para detectar los antígenos específicos de excreción/secreción de Hymenolepis nana en sueros de pacientes con himenolepiosis y con otras helmintiosis confirmadas. Se utilizó a Mesocricetus auratus “hamster” para obtener ejemplares adultos de H. nana. Los antígenos de excreción/secreción fueron obtenidos en el medio MEM (Minimum Essential Medium Eagle), y enfrentados con un grupo de sueros de pacien...

  6. Detection of possible DNA repair enzymes on sodium dodecyl sulfate-polyacrylamide gels by protein blotting to damaged DNA-fixed membranes

    International Nuclear Information System (INIS)

    A novel method for detecting possible DNA repair enzymes on sodium dodecyl sulfate-polyacrylamide gels by blotting them onto a damaged DNA-fixed membrane is presented. To prepare the membrane, highly polymerized calf thymus DNA immobilized on a nylon membrane is damaged chemically. Enzymes, either homogeneous or crude, that are possibly involved in the priming step of DNA repair are fractionated by SDS-polyacrylamide gel electrophoresis (SDS-PAGE) and are renatured to active form by incubating the gel in an appropriate buffer. The renatured enzyme is then blotted onto the damaged DNA-fixed membrane, a process during which incision and/or excision are introduced to the damaged DNA by the enzymes. The incision and/or excision provide priming sites for repair DNA synthesis in the subsequent step in which the membrane is incubated with DNA polymerase in the presence of alpha-32P-labeled substrate. The site of substrate incorporation on the membrane reflecting the molecular weight of the repair enzyme is finally visualized by autoradiography. The present technique is established using Escherichia coli exonuclease III and a DNA-fixed membrane treated with bleomycin or acid-depurinated. By application of this method, a priming factor (an exonuclease) involved in the initiation of bleomycin-induced DNA repair is detected in the extract of mouse ascites sarcoma cells, and thus the molecular weight of the enzyme is estimated. Some apurinic/apyrimidinic endonucleases of mammals are also detected by the present procedure

  7. Analysis of the insulin receptor gene in noninsulin-dependent diabetes mellitus by denaturing gradient gel blots: A clinical research center study

    Energy Technology Data Exchange (ETDEWEB)

    Magre, J.; Goldfine, A.B.; Warram, J.H. [Harvard Medical School, Boston, MA (United States)] [and others

    1995-06-01

    We have used a new technique of denaturing gradient gel blotting to determine the prevalence of alterations in the intracellular domain of the insulin receptor in normal individuals and subjects with non-insulin-dependent diabetes mellitus (NIDDM). This method detects DNA sequence differences as restriction fragment melting polymorphisms (RFMP) and is sensitive to changes in sequence at both restriction sites and within the fragments themselves. Using restriction digests with AluI, HaeIII, HinfI, RsaI, Sau3A, and Sau96, 12 RFMPs were found to localize to the region of the {beta}-subunit of the insulin receptor gene. Using exon-specific probes, these RFMPs could be localized to specific regions surrounding individual exons, including exons, 14, 15, 16, 18, 20, and 22. In general, linkage disequilibrium between polymorphisms was inversely related to their distance in the gene structure, although there was a {open_quotes}hot spot{close_quotes} for recombination between exons 19 and 20. No difference in melting temperatures or allele frequency was observed between NIDDM patients and controls. These data indicate that the region of the insulin receptor gene coding for the intracellular portion of the {beta}-subunit is highly polymorphic and that polymorphisms surrounding specific exons can be identified by denaturing gradient gel blotting, but there is no evidence that variation at this locus contributes to NIDDM susceptibility in most individuals. 36 refs., 3 figs., 3 tabs.

  8. Demonstration of functional low-density lipoprotein receptors by protein blotting in fibroblasts from a subject with homozygous receptor-negative familial hypercholesterolemia

    International Nuclear Information System (INIS)

    We report the detection of low-density lipoprotein (LDL) receptors by the technique of receptor blotting in fibroblasts from a patient with homozygous familial hypercholesterolemia (FHC) previously classified as ''receptor negative.'' Solubilized receptors were electrophoresed, transferred to nitrocellulose paper, treated with LDL followed by radiolabeled antibody to LDL, and visualized by autoradiography. GM 2000 FHC fibroblasts revealed LDL receptors with an apparent molecular weight of approximately 140,000, the same as in normal cells. LDL receptor activity by blotting in GM 2000 cells was greatly diminished in comparison with normal cells, but was calcium dependent. Receptor activity was also detectable by conventional monolayer binding and degradation assays. Thus, GM 2000 cells have profoundly diminished LDL receptor activity, but retain the genetic capacity to make LDL receptor material of normal molecular weight that is capable of binding LDL. Previous studies have demonstrated the presence of trace amounts of immunoreactive LDL receptor protein in fibroblasts from some receptor-negative FHC homozygotes. These studies are extended by demonstrating the ability of this material to bind LDL

  9. Comparison of RT-PCR-Dot blot hybridization based on radioisotope 32P with conventional RT-PCR and commercial ELISA Assays for blood screening of HIV-1

    International Nuclear Information System (INIS)

    There are many commercial ELISA and rapid test kits that have been used for blood screening; however, the kits can give false positive and negative results. Therefore, RT-PCR (Reverse Transcription Polymerase Chain Reaction) - Dot Blot Hybridization based on radioisotope 32P (RDBR) method was developed in this research, to compare the method with the conventional RT-PCR and commercial ELISA Enzyme-Linked lmmunosorbent Assay) kit. This method is efficient for screening of large blood specimens and surveillance study. Eighty seven samples were used and serum of the samples were tested by ELISA to detect HIV-1. The HIV-l RNA genome was extracted from plasma samples and tested using the RT-PCR and RDBR methods. Of 87 samples that were tested, the rates of positive testing of the RT-PCR, the RDBR, and the ELISA were 71.26%, 74.71%, and 80.46%, respectively. The RDBR (a combination of RTPCR and dot blot hybridization) was more sensitive than conventional RT-PCR by showing 3.45% in increase number of positive specimens. The results showed that of 9 samples (10.34%) were negative RDBR and positive ELISA, while 4 samples (4.60%) were negative ELISA and positive RDBR. The two methods showed slightly difference in the results but further validation is still needed. However, RDBR has high potential as an alternative method for screening of blood in large quantities when compared to method of conventional RT-PCR and ELISA. (author)

  10. Purificación de antígenos de Fasciola hepatica mediante electroelución y su aplicación inmunodiagnóstica mediante Western Blot en la infección animal PURIFICATION OF Fasciola hepatica ANTIGENS BY ELECTROELUTION AND ITS DIAGNOSTIC APPLICATION THROUGH WESTERN BLOT IN ANIMAL INFECTION

    Directory of Open Access Journals (Sweden)

    FERNANDO FREDES

    2001-01-01

    Full Text Available La electroelución implementada en este estudio logró purificar por separado dos polipéptidos, uno de 14 y otro de 29 kDa. La eficiencia diagnóstica de cada uno de estos polipéptidos medida a través de Western blot indicó una sensibilidad de 95% y 97,5% respectivamente y ambos una especificidad de 100%. Además se concluye que son de utilidad en la pesquisa de infecciones prepatentesTwo polypeptides (14 kDa and 29 kDa of adult Fasciola hepatica were purified by electroelution and its diagnostic application through Western blot was evaluated. The value of sensitivity was 95% and 97.5%, respectively and the value of specificity was 100% in both polypeptides. These antigenic components were efficient for the diagnosis of the prepatent stage of the infection

  11. Indians and Southern Colonial Statutes

    Science.gov (United States)

    Kawashima, Yasuhide

    1974-01-01

    Southern statutes, with their dual nature of uniformity and diversity, were doubtlessly an essential source of law for the examination of complex legal relations between American Indians and Anglo Americans in the colonial South. (FF)

  12. Invertebrate diversity in southern California

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This shapefile displays mean invertebrate diversity within 5 minute grid cells. The Shannon Index of diversity was calculated from Southern California Coastal Water...

  13. Notes on Southern African Tuberales

    Directory of Open Access Journals (Sweden)

    W. F. O. Marasas

    1973-09-01

    Full Text Available Three species of Tuberales have been found in Southern Africa.  Terfezia pfeilii Henn. occurs in the Kalahari Desert and adjacent areas of the Cape Province, Botswana and South-West Africa. The other two,  Terfezia austroafricana sp. nov. and  Choiromyces echinulatus sp. nov., are known only from the Cape.  C. echinulatus is the first representative of that genus to be collected in Africa or the Southern Hemisphere.

  14. Energy Trade in Southern Africa

    International Nuclear Information System (INIS)

    This document deals with possible energy growth in Southern African countries. This region possesses substantial energy resources (including fossil fuels), but because of political instability, government intervention, financial paralysis and lack of adequate transportation infrastructure, this region faces problems in satisfying energy needs. Two key international actions, namely the South African Development Community (SADC) Energy Protocol and the Southern African Power Pool (SAPP) are expected to enhance energy trade and promote economic development. (TEC)

  15. Unemployment Risk in Southern Greece

    OpenAIRE

    Stavros Rodokanakis

    2010-01-01

    The basic aim of this paper is to investigate the impact that educational level of individuals and participation in training programmes have on their job prospects in Southern Greece (namely the regions of Southern Aegean and Crete) during the implementation of the first Community Support Framework (1989-1993). We try to see whether the educational level itself and participation in training programmes increased the chances of finding a job. More specifically, we research what are the social a...

  16. MULES IN SOUTHERN AGRICULTURE: REVISITED

    OpenAIRE

    Garrett, Martin A., Jr.

    2001-01-01

    This article provides additional empirical evidence concerning the choice of the mule as the dominant draft animal in southern agricultural production in the latter 19th and early 20th century. While the mule was uniquely suited to the crops and climate of the region, two divergent arguments have been presented as to why the mule was the dominant draft animal in southern agricultural production. This research reevaluates these arguments and provides evidence that it was, in fact, the characte...

  17. Serum detection of IgG antibodies against Demodex canis by western blot in healthy dogs and dogs with juvenile generalized demodicosis.

    Science.gov (United States)

    Ravera, Ivan; Ferreira, Diana; Gallego, Laia Solano; Bardagí, Mar; Ferrer, Lluís

    2015-08-01

    The aim of this study was to investigate the presence of canine immunoglobulins (Ig) G against Demodex proteins in the sera of healthy dogs and of dogs with juvenile generalized demodicosis (CanJGD) with or without secondary pyoderma. Demodex mites were collected from dogs with CanJGD. Protein concentration was measured and a western blot technique was performed. Pooled sera from healthy dogs reacted mainly with antigen bands ranging from 55 to 72 kDa. Pooled sera from dogs with CanJGD without secondary pyoderma reacted either with 10 kDa antigen band or 55 to 72 kDa bands. Pooled sera from dogs with CanJGD with secondary pyoderma reacted only with a 10 kDa antigen band. The results of this study suggest that both healthy dogs and dogs with CanJGD develop a humoral response against different proteins of Demodex canis. PMID:26267107

  18. Twenty-two year follow-up of an Indian family with dysferlinopathy-clinical, immunocytochemical, western blotting and genetic features

    Directory of Open Access Journals (Sweden)

    Khadilkar Satish

    2008-01-01

    Full Text Available Long-term observations over a period of 22 years in an Indian family with primary dysferlinopathy are recorded, defining phenotypic variability. In the propositus, the dystrophy began distally in the tibialis anterior muscles, before involving the gastrocnemius. Transient painful calf hypertrophy, followed by calf wasting was observed. The proximal lower and upper limbs weakened after three to four years. The younger sibling presented with the proximo-distal phenotype. Both patients showed very high creatine kinase values early into the illness. Disease progression was slow. The younger sibling lost ambulation 14 years after onset, while the elder one remains ambulatory 22 years into the illness. Muscle biopsy showed dystrophic features and absence of dysferlin. Monocyte western blotting confirmed absence of dysferlin. Genetic analysis detected a heterozygous mutation in Exon 54 [c.6124C>T] in the DYSF gene. This is the first family with a diagnosis of dysferlinopathy supported by genetic data, reported from India.

  19. Sulphate reduction and vertical distribution of sulphate-reducing bacteria quantified by rRNA slot-blot hybridization in a coastal marine sediment

    DEFF Research Database (Denmark)

    Sahm, K.; MacGregor, BJ; Jørgensen, BB; Stahl, DA

    1999-01-01

    In the past, enumeration of sulphate-reducing bacteria (SRB) by cultivation-based methods generally contradicted measurements of sulphate reduction, suggesting unrealistically high respiration rates per cell. Here, we report evidence that quantification of SRB rRNA by slot-blot hybridization is a...... between 18% and 25% to the prokaryotic rRNA pool. The dominant SRB were related to complete oxidizing genera (Desulphococcus, Desulphosarcina and Desulphobacterium), while Desulpho-bacter could not be detected. The vertical profile and quantity of rRNA from SRB was compared with sulphate reduction rates...... (SRR) measured with (SO42-)-S-35 tracer in whole-core incubations. While SRB abundance was highest near the surface, peaking at around 1.5cm, measured sulphate reduction rates were lowest in this region. A second peak of SRB rRNA was observed at the transition zone from oxidized to reduced sediment...

  20. A comparison of antigenic peptides in muscle larvae of several Trichinella species by two-dimensional western-blot analysis with monoclonal antibodies

    Directory of Open Access Journals (Sweden)

    Dea-Ayuela M.A.

    2001-06-01

    Full Text Available The antigens recognised by mAb US5 specific to 53 kDa glycoprotein (gp 53 in T. spiralis L-1 muscle larvae (TSL1 antigens, mAb US9 specific to gp 53 in TSL1 from all encapsulated species and mAb US4 specific to a tyvelose containing tetrasaccharide present in TSL1, were investigated in crude extracts from muscle larvae of T. spiralis, T. nativa and T. britovi by 2D-electrophoresis and western-blot. At least four proteins of different pI were recognised by mAb US5 on T. spiralis antigens. Recognition profile of mAb US9 on T. spiralis antigens exhibited some variation with regard to that of the US5. Polymorphism was apparent in gp 53. High reactivity was shown by the mAb US4 with the three species.

  1. High rate of missed HIV infections in individuals with indeterminate or negative HIV western blots based on current HIV testing algorithm in China.

    Science.gov (United States)

    Liu, Man-Qing; Zhu, Ze-Rong; Kong, Wen-Hua; Tang, Li; Peng, Jin-Song; Wang, Xia; Xu, Jun; Schilling, Robert F; Cai, Thomas; Zhou, Wang

    2016-08-01

    It remains unclear if China's current HIV antibody testing algorithm misses a substantial number of HIV infected individuals. Of 196 specimens with indeterminate or negative results on HIV western blot (WB) retrospectively examined by HIV-1 nucleic acid test (NAT), 67.57% (75/111) of indeterminate WB samples, and 16.47% (14/85) of negative WB samples were identified as NAT positive. HIV-1 loads in negative WB samples were significantly higher than those in indeterminate WB samples. Notably, 86.67% (13/15) of samples with negative WB and double positive immunoassay results were NAT positive. The rate of HIV-1 infections missed by China's current HIV testing algorithm is unacceptably high. Thus, China should consider using NAT or integrating fourth generation ELISA into current only antibodies-based HIV confirmation. J. Med. Virol. 88:1462-1466, 2016. © 2016 Wiley Periodicals, Inc. PMID:26856240

  2. Localization and Distribution of 'Candidatus Liberibacter asiaticus' in Citrus and Periwinkle by Direct Tissue Blot Immuno Assay with an Anti-OmpA Polyclonal Antibody.

    Science.gov (United States)

    Ding, Fang; Duan, Yongping; Paul, Cristina; Brlansky, Ronald H; Hartung, John S

    2015-01-01

    'Candidatus Liberibacter asiaticus' (CaLas), a non-cultured member of the α-proteobacteria, is the causal agent of citrus Huanglongbing (HLB). Due to the difficulties of in vitro culture, antibodies against CaLas have not been widely used in studies of this pathogen. We have used an anti-OmpA polyclonal antibody based direct tissue blot immunoassay to localize CaLas in different citrus tissues and in periwinkle leaves. In citrus petioles, CaLas was unevenly distributed in the phloem sieve tubes, and tended to colonize in phloem sieve tubes on the underside of petioles in preference to the upper side of petioles. Both the leaf abscission zone and the junction of the petiole and leaf midrib had fewer CaLas bacteria compared to the main portions of the petiole and the midribs. Colonies of CaLas in phloem sieve tubes were more frequently found in stems with symptomatic leaves than in stems with asymptomatic leaves with an uneven distribution pattern. In serial sections taken from the receptacle to the peduncle, more CaLas were observed in the peduncle sections adjacent to the stem. In seed, CaLas was located in the seed coat. Many fewer CaLas were found in the roots, as compared to the seeds and petioles when samples were collected from trees with obvious foliar symptoms. The direct tissue blot immuno assay was adapted to whole periwinkle leaves infected by CaLas. The pathogen was distributed throughout the lateral veins and the results were correlated with results of qPCR. Our data provide direct spatial and anatomical information for CaLas in planta. This simple and scalable method may facilitate the future research on the interaction of CaLas and host plant. PMID:25946013

  3. Localization and Distribution of 'Candidatus Liberibacter asiaticus’ in Citrus and Periwinkle by Direct Tissue Blot Immuno Assay with an Anti-OmpA Polyclonal Antibody

    Science.gov (United States)

    Ding, Fang; Duan, Yongping; Paul, Cristina; Brlansky, Ronald H.; Hartung, John S.

    2015-01-01

    ‘Candidatus Liberibacter asiaticus’ (CaLas), a non-cultured member of the α-proteobacteria, is the causal agent of citrus Huanglongbing (HLB). Due to the difficulties of in vitro culture, antibodies against CaLas have not been widely used in studies of this pathogen. We have used an anti-OmpA polyclonal antibody based direct tissue blot immunoassay to localize CaLas in different citrus tissues and in periwinkle leaves. In citrus petioles, CaLas was unevenly distributed in the phloem sieve tubes, and tended to colonize in phloem sieve tubes on the underside of petioles in preference to the upper side of petioles. Both the leaf abscission zone and the junction of the petiole and leaf midrib had fewer CaLas bacteria compared to the main portions of the petiole and the midribs. Colonies of CaLas in phloem sieve tubes were more frequently found in stems with symptomatic leaves than in stems with asymptomatic leaves with an uneven distribution pattern. In serial sections taken from the receptacle to the peduncle, more CaLas were observed in the peduncle sections adjacent to the stem. In seed, CaLas was located in the seed coat. Many fewer CaLas were found in the roots, as compared to the seeds and petioles when samples were collected from trees with obvious foliar symptoms. The direct tissue blot immuno assay was adapted to whole periwinkle leaves infected by CaLas. The pathogen was distributed throughout the lateral veins and the results were correlated with results of qPCR. Our data provide direct spatial and anatomical information for CaLas in planta. This simple and scalable method may facilitate the future research on the interaction of CaLas and host plant. PMID:25946013

  4. Localization and Distribution of 'Candidatus Liberibacter asiaticus' in Citrus and Periwinkle by Direct Tissue Blot Immuno Assay with an Anti-OmpA Polyclonal Antibody.

    Directory of Open Access Journals (Sweden)

    Fang Ding

    Full Text Available 'Candidatus Liberibacter asiaticus' (CaLas, a non-cultured member of the α-proteobacteria, is the causal agent of citrus Huanglongbing (HLB. Due to the difficulties of in vitro culture, antibodies against CaLas have not been widely used in studies of this pathogen. We have used an anti-OmpA polyclonal antibody based direct tissue blot immunoassay to localize CaLas in different citrus tissues and in periwinkle leaves. In citrus petioles, CaLas was unevenly distributed in the phloem sieve tubes, and tended to colonize in phloem sieve tubes on the underside of petioles in preference to the upper side of petioles. Both the leaf abscission zone and the junction of the petiole and leaf midrib had fewer CaLas bacteria compared to the main portions of the petiole and the midribs. Colonies of CaLas in phloem sieve tubes were more frequently found in stems with symptomatic leaves than in stems with asymptomatic leaves with an uneven distribution pattern. In serial sections taken from the receptacle to the peduncle, more CaLas were observed in the peduncle sections adjacent to the stem. In seed, CaLas was located in the seed coat. Many fewer CaLas were found in the roots, as compared to the seeds and petioles when samples were collected from trees with obvious foliar symptoms. The direct tissue blot immuno assay was adapted to whole periwinkle leaves infected by CaLas. The pathogen was distributed throughout the lateral veins and the results were correlated with results of qPCR. Our data provide direct spatial and anatomical information for CaLas in planta. This simple and scalable method may facilitate the future research on the interaction of CaLas and host plant.

  5. Fire in Southern Greece

    Science.gov (United States)

    2007-01-01

    The last major fire in southern Greece was brought under control this weekend, but not until over 469,000 acres of mostly forest and farmland were destroyed. An estimated 4000 people lost their homes, and over 60 deaths were reported. These were the worst fires ever to occur in Greece. In this Advanced Spaceborne Thermal Emission and Reflection Radiometer (ASTER) image acquired September 4 over the western coast of the Peloponnesus Peninsula, burned areas appear in dark red, and unburned vegetation is green. The area includes the ancient site of Olympia, the site of the Olympic Games in classical times. The fires came within 2 kilometers (1.2 miles) of the archaeological site, but spared it. With its 14 spectral bands from the visible to the thermal infrared wavelength region, and its high spatial resolution of 15 to 90 meters (about 50 to 300 feet), ASTER images Earth to map and monitor the changing surface of our planet. ASTER is one of five Earth-observing instruments launched December 18, 1999, on NASA's Terra spacecraft. The instrument was built by Japan's Ministry of Economy, Trade and Industry. A joint U.S./Japan science team is responsible for validation and calibration of the instrument and the data products. The broad spectral coverage and high spectral resolution of ASTER provides scientists in numerous disciplines with critical information for surface mapping, and monitoring of dynamic conditions and temporal change. Example applications are: monitoring glacial advances and retreats; monitoring potentially active volcanoes; identifying crop stress; determining cloud morphology and physical properties; wetlands evaluation; thermal pollution monitoring; coral reef degradation; surface temperature mapping of soils and geology; and measuring surface heat balance. The U.S. science team is located at NASA's Jet Propulsion Laboratory, Pasadena, Calif. The Terra mission is part of NASA's Science Mission Directorate. Size: 56.4 by 63.5 kilometers (35 by 39

  6. MicroRNA fate upon targeting with anti-miRNA oligonucleotides as revealed by an improved Northern-blot-based method for miRNA detection.

    Science.gov (United States)

    Torres, Adrian G; Fabani, Martin M; Vigorito, Elena; Gait, Michael J

    2011-05-01

    MicroRNAs (miRNAs) are small non-coding RNAs involved in fine-tuning of gene regulation. Antisense oligonucleotides (ONs) are promising tools as anti-miRNA (anti-miR) agents toward therapeutic applications and to uncover miRNA function. Such anti-miR ONs include 2'-O-methyl (OMe), cationic peptide nucleic acids like K-PNA-K3, and locked nucleic acid (LNA)-based anti-miRs such as LNA/DNA or LNA/OMe. Northern blotting is a widely used and robust technique to detect miRNAs. However, miRNA quantification in the presence of anti-miR ONs has proved to be challenging, due to detection artifacts, which has led to poor understanding of miRNA fate upon anti-miR binding. Here we show that anti-miR ON bound to miR-122 can prevent the miRNA from being properly precipitated into the purified RNA fraction using the standard RNA extraction protocol (TRI-Reagent), yielding an RNA extract that does not reflect the real cellular levels of the miRNA. An increase in the numbers of equivalents of isopropanol during the precipitation step leads to full recovery of the targeted miRNA back into the purified RNA extract. Following our improved protocol, we demonstrate by Northern blotting, in conjunction with a PNA decoy strategy and use of high denaturing PAGE, that high-affinity anti-miRs (K-PNA-K3, LNA/DNA, and LNA/OMe) sequester miR-122 without causing miRNA degradation, while miR-122 targeting with a lower-affinity anti-miR (OMe) seems to promote degradation of the miRNA. The technical issues explored in this work will have relevance for other hybridization-based techniques for miRNA quantification in the presence of anti-miR ONs. PMID:21441346

  7. Southern California Adjoint Source Inversions

    Science.gov (United States)

    Tromp, J.; Kim, Y.

    2007-12-01

    Southern California Centroid-Moment Tensor (CMT) solutions with 9 components (6 moment tensor elements, latitude, longitude, and depth) are sought to minimize a misfit function computed from waveform differences. The gradient of a misfit function is obtained based upon two numerical simulations for each earthquake: one forward calculation for the southern California model, and an adjoint calculation that uses time-reversed signals at the receivers. Conjugate gradient and square-root variable metric methods are used to iteratively improve the earthquake source model while reducing the misfit function. The square-root variable metric algorithm has the advantage of providing a direct approximation to the posterior covariance operator. We test the inversion procedure by perturbing each component of the CMT solution, and see how the algorithm converges. Finally, we demonstrate full inversion capabilities using data for real Southern California earthquakes.

  8. ANALYSIS OF Treponema pallidum RECOMBINANT ANTIGENS FOR DIAGNOSIS OF SYPHILIS BY WESTERN BLOTTING TECHNIQUE Análise de antígenos recombinantes de Treponema pallidum no diagnóstico da sífilis utilizando a técnica de Western Blotting

    OpenAIRE

    SATO Neuza Satomi; HIRATA Mário H.; HIRATA Rosário D.C.; Lia Carmen M.S. ZERBINI; Edilene P.R. SILVEIRA; MELO Carmem Silvia de; Ueda, Mirthes

    1999-01-01

    Three GST fusion recombinant antigen of Treponema pallidum, described as GST-rTp47, GST-rTp17 and GST-rTp15 were analyzed by Western blotting techniques. We have tested 53 serum samples: 25 from patients at different clinical stages of syphilis, all of them presenting anti-treponemal antibody, 25 from healthy blood donors and three from patients with sexually transmitted disease (STD) other than syphilis. Almost all samples from patients with syphilis presented a strong reactivity with GST-rT...

  9. Southern States' Routing Agency Report

    International Nuclear Information System (INIS)

    The Southern States' Routing Agency Report is a compendium of 16-southern states' routing program for the transportation of high-level radioactive materials. The report identifies the state-designated routing agencies as defined under 49 Code of Federal Regulations (CFR) Part 171 and provides a reference to the source and scope of the agencies' rulemaking authority. Additionally, the state agency and contact designated by the state's governor to receive advance notification and shipment routing information under 10 CFR Parts 71 and 73 are also listed

  10. Southern Ocean Iron Experiment (SOFex)

    Energy Technology Data Exchange (ETDEWEB)

    Coale, Kenneth H.

    2005-07-28

    The Southern Ocean Iron Experiment (SOFeX) was an experiment decades in the planning. It's implementation was among the most complex ship operations that SIO has been involved in. The SOFeX field expedition was successful in creating and tracking two experimentally enriched areas of the Southern Ocean, one characterized by low silicic acid, one characterized by high silicic acid. Both experimental sites were replete with abundant nitrate. About 100 scientists were involved overall. The major findings of this study were significant in several ways: (1) The productivity of the southern ocean is limited by iron availability. (2) Carbon uptake and flux is therefore controlled by iron availability (3) In spite of low silicic acid, iron promotes non-silicious phytoplankton growth and the uptake of carbon dioxide. (4) The transport of fixed carbon from the surface layers proceeds with a C:N ratio that would indicate differential remineralization of nitrogen at shallow depths. (5) These finding have major implications for modeling of carbon export based on nitrate utilization. (6) The general results of the experiment indicate that, beyond other southern ocean enrichment experiments, iron inputs have a much wider impact of productivity and carbon cycling than previously demonstrated. Scientific presentations: Coale, K., Johnson, K, Buesseler, K., 2002. The SOFeX Group. Eos. Trans. AGU 83(47) OS11A-0199. Coale, K., Johnson, K. Buesseler, K., 2002. SOFeX: Southern Ocean Iron Experiments. Overview and Experimental Design. Eos. Trans. AGU 83 (47) OS22D-01. Buesseler, K.,et al. 2002. Does Iron Fertilization Enhance Carbon Sequestration? Particle flux results from the Southern Ocean Iron Experiment. Eos. Trans. AGU 83 (47), OS22D-09. Johnson, K. et al. 2002. Open Ocean Iron Fertilization Experiments From IronEx-I through SOFeX: What We Know and What We Still Need to Understand. Eos. Trans. AGU 83 (47), OS22D-12. Coale, K. H., 2003. Carbon and Nutrient Cycling During the

  11. DIET OF THE SOUTHERN TOAD FROM THE SOUTHERN EVERGLADES

    Science.gov (United States)

    We examined the diet of a February-May sample of the southern toad (Bufo Terrestris) from the Everglades National Park. Above the familial level, 13 taxa were consumed, but ants (Hymenoptera) and beetles (Coleoptera) were consumed most by, and in the greatest number of s...

  12. Search for oncogene mutations in X-ray-transformed mouse 10T1/2 cells by denaturing gradient gel electrophoresis blotting

    International Nuclear Information System (INIS)

    The authors sought evidence for possible mutations within the c-myc, c-Ha-ras and c-Ki-ras loci of X-ray-transformed mouse C3H10T1/2 cell clones using the denaturing gradient gel electrophoresis (DGGE) blot technique. This method was developed to detect mutations (e.g. single base changes, small deletions) in genomic DNA, by measuring differences in the melting behaviour of short DNA fragments (50-800 bp) obtained by digestion of genomic DNA with several specific 4 bp recognition site restriction enzymes. Genomic DNAs derived from 23 X-ray-transformed clones were digested with several restriction enzymes, electrophorized on denaturing gradient gel and hybridized to c-myc, c-Ha-ras and c-Ki-ras cDNA probes. No alterations in melting patterns were observed for any of these oncogenes as compared with DNA from 18 control, non-irradiated wild-type 10T1/2 cell clones, suggesting that transformation was not associated with mutation of these genes nor with changes in their patterns of methylation. (author)

  13. Estandarización de la técnica de Western blot para el diagnóstico de la fasciolosis humana utilizando antígenos de excreción-secreción de Fasciola hepática Western blot technique standardization of the diagnosis of human fasciolosis using Fasciola hepatica excreted-secreted antigens

    Directory of Open Access Journals (Sweden)

    Hermes Escalante

    2011-09-01

    Full Text Available Objetivos. Evaluar la eficacia de la técnica de electroinmunotransferencia (EITB o Western blot utilizando antígenos de excreción-secreción de las formas adultas de Fasciola hepatica (Fh E/S Ag para el diagnóstico de la fasciolosis humana. Materiales y métodos. Los antígenos fueron obtenidos a las 18 horas de incubación en medio Minimum Essential Eagle y preparados a la concentración proteica de 0,15 ug/uL; los cuales, al ser enfrentados con un pool de sueros de pacientes con fasciolosis confirmada por el hallazgo de huevos del parásito en las heces, se detectaron los antígenos de 10, 12, 17, 23, 27, 30, 36, 43, 66 y 136 KDa, con los cuales se desarrolló la técnica de Western blot. La sensibilidad se evaluó empleando sueros de 67 pacientes con fasciolosis, y la especificidad con sueros de 57 pacientes con otras parasitosis y diez sueros de personas no parasitadas. Resultados. De los 67 sueros, 64 reaccionaron con la banda de 23 KDa y 61 con la banda de 17KDa. Estas dos bandas no fueron detectadas por ninguno de los sueros de pacientes con otras parasitosis, ni de personas no parasitadas, siendo por ello consideradas como específicas y diagnósticas. Conclusiones. La sensibilidad de la prueba, utilizando las bandas de 17 y 23 KDa, fue de 95,5 % cuando se presenta reacción positiva en una o en las dos bandas, siendo la especificidad para estos dos antígenos de 100 % con un valor predictivo positivo de 100 % y un valor predictivo negativo de 95,71 %.Objectives. To evaluate the performance of the enzyme-linked immunoelectrotransfer blot assay (EITB, Western blot using excretory/secretory antigens from adult forms of Fasciola hepatica (Fh E/S Ag for the diagnosis of human fasciolosis. Materials and methods. Antigens were obtained after 18 hours of incubation in culture medium Minimum Essential Eagle, prepared at a protein concentration of 0.15 ug/uL and run against a pool of sera of patients with proven fasciolosis (confirmed by the

  14. Southern Universities: Are They Rising?

    Science.gov (United States)

    Whitehead, John S.

    1986-01-01

    This essay reviews four recent works on Southern universities: (1) "The University of Georgia: A Bicentennial History" (Dyer, 1985); (2) "A Pictorial History of the University of Georgia" (Boney, 1984); (3) To Foster Knowledge: A History of the University of Tennessee 1794-1970" (Montgomery, et al., 1984); and (4) "Gone with the Ivy: A Biography…

  15. Pteropods in Southern Ocean ecosystems

    Science.gov (United States)

    Hunt, B. P. V.; Pakhomov, E. A.; Hosie, G. W.; Siegel, V.; Ward, P.; Bernard, K.

    2008-09-01

    To date, little research has been carried out on pelagic gastropod molluscs (pteropods) in Southern Ocean ecosystems. However, recent predictions are that, due to acidification resulting from a business as usual approach to CO 2 emissions (IS92a), Southern Ocean surface waters may begin to become uninhabitable for aragonite shelled thecosome pteropods by 2050. To gain insight into the potential impact that this would have on Southern Ocean ecosystems, we have here synthesized available data on pteropod distributions and densities, assessed current knowledge of pteropod ecology, and highlighted knowledge gaps and directions for future research on this zooplankton group. Six species of pteropod are typical of the Southern Ocean south of the Sub-Tropical Convergence, including the four Thecosomes Limacina helicina antarctica, Limacina retroversa australis, Clio pyramidata, and Clio piatkowskii, and two Gymnosomes Clione limacina antarctica and Spongiobranchaea australis. Limacina retroversa australis dominated pteropod densities north of the Polar Front (PF), averaging 60 ind m -3 (max = 800 ind m -3) and 11% of total zooplankton at the Prince Edward Islands. South of the PF L. helicina antarctica predominated, averaging 165 ind m -3 (max = 2681 ind m -3) and up to >35% of total zooplankton at South Georgia, and up to 1397 ind m -3 and 63% of total zooplankton in the Ross Sea. Combined pteropods contributed 40% of community grazing impact. Further research is required to quantify diet selectivity, the effect of phytoplankton composition on growth and reproductive success, and the role of carnivory in thecosomes. Life histories are a significant knowledge gap for Southern Ocean pteropods, a single study having been completed for L. retroversa australis, making population studies a priority for this group. Pteropods appear to be important in biogeochemical cycling, thecosome shells contributing >50% to carbonate flux in the deep ocean south of the PF. Pteropods may also

  16. Identification of reference proteins for Western blot analyses in mouse model systems of 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD toxicity.

    Directory of Open Access Journals (Sweden)

    Stephenie D Prokopec

    Full Text Available Western blotting is a well-established, inexpensive and accurate way of measuring protein content. Because of technical variation between wells, normalization is required for valid interpretation of results across multiple samples. Typically this involves the use of one or more endogenous controls to adjust the measured levels of experimental molecules. Although some endogenous controls are widely used, validation is required for each experimental system. This is critical when studying transcriptional-modulators, such as toxicants like 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD.To address this issue, we examined hepatic tissue from 192 mice representing 47 unique combinations of strain, sex, Ahr-genotype, TCDD dose and treatment time. We examined 7 candidate reference proteins in each animal and assessed consistency of protein abundance through: 1 TCDD-induced fold-difference in protein content from basal levels, 2 inter- and intra- animal stability, and 3 the ability of each candidate to reduce instability of the other candidates. Univariate analyses identified HPRT as the most stable protein. Multivariate analysis indicated that stability generally increased with the number of proteins used, but gains from using >3 proteins were small. Lastly, by comparing these new data to our previous studies of mRNA controls on the same animals, we were able to show that the ideal mRNA and protein control-genes are distinct, and use of only 2-3 proteins provides strong stability, unlike in mRNA studies in the same cohort, where larger control-gene batteries were needed.

  17. Evaluation of a New Dot Blot Enzyme Immunoassay (Directigen Flu A+B) for Simultaneous and Differential Detection of Influenza A and B Virus Antigens from Respiratory Samples

    Science.gov (United States)

    Reina, Jordi; Padilla, Emma; Alonso, Fermin; Ruiz de Gopegui, Enrique; Munar, Maria; Mari, Margarita

    2002-01-01

    We report a prospective evaluation of a new dot blot enzyme immunoassay (EIA) method for the direct, rapid, qualitative, simultaneous, and differential detection of the influenza A (IA) and B (IB) virus antigen in different respiratory samples. The EIA method was compared with the shell vial culture system (MDCK cell line) used with the same samples. We studied 160 samples from 93 (58.1%) pediatric patients (hospital emergency room) and from 67 (41.9%) adult patients (sentinel network). Seventy-four(46.2%) samples were considered positive; of them, 46 (62.2%) were from pediatric patients and 28 (37.8%) were from an adult group (P < 0.05), with overall positive values of 49.9% and 41.7%, respectively. All 74 (100%) of the positive samples were isolated in cell culture versus the 68.9% that were detected as positive by the new EIA method (P < 0.05). Of the 41 samples positive for the IA virus, the EIA detected 34 (82.9%) positive samples; of the 33 samples positive for the IB virus, the EIA detected 17 (51.5%) positive samples (P < 0.05). No false-positive reaction was detected with the EIA method (specificity and positive predictive value of 100%). The overall results obtained in the comparison between the new EIA and the shell vial culture had a sensibility of 82.9% and predictive negative values of 92.4% for the IA virus and 51.5% and 84.3%, respectively, for the IB virus. This evaluation shows sensitivity and specificity percentages for the new EIA method that is acceptable for routine use in IA virus detection. The results obtained were worse for IB virus detection, but this new EIA method is actually the only one with the capacity to differentiate between the two influenza viruses. PMID:12202608

  18. HIV-1/2 indeterminate Western blot results: follow-up of asymptomatic blood donors in Belo Horizonte, Minas Gerais, Brazil

    Directory of Open Access Journals (Sweden)

    CARNEIRO-PROIETTI A.B.F.

    1999-01-01

    Full Text Available The clinical and public health importance of indeterminate results in HIV-1/2 testing is still difficult to evaluate in volunteer blood donors. At Fundação Hemominas, HIV-1/2 ELISA is used as the screening test and, if reactive, is followed by Western blot (WB. We have evaluated 84 blood donors who had repeatedly reactive ELISA tests for HIV-1/2, but indeterminate WB results. Sixteen of the 84 donors (19.0% had history of sexually transmitted diseases; 18/84 (21.4% informed receiving or paying for sex; 3/84 (3.6% had homosexual contact; 2/26 women (7.6% had past history of multiple illegal abortions and 3/84 (3.6% had been previously transfused. Four out of 62 donors (6.5% had positive anti-nuclear factor (Hep2, with titles up to 1:640. Parasitological examination of the stool revealed eggs of S. mansoni in 4/62 (6.4% donors and other parasites in 8/62 (12.9%. Five (5.9% of the subjects presented overt seroconversion for HIV-1/2, 43/84 (51.2% had negative results on the last visit, while 36/84 (42.9% remained WB indeterminate. Although some conditions could be found associated with the HIV-1/2 indeterminate WB results and many donors had past of risky behavior, the significance of the majority of the results remains to be determined.

  19. Discovery of novel poly(ADP-ribose) glycohydrolase inhibitors by a quantitative assay system using dot-blot with anti-poly(ADP-ribose)

    Energy Technology Data Exchange (ETDEWEB)

    Okita, Naoyuki, E-mail: nokita7@rs.noda.tus.ac.jp [Genome and Drug Research Center, Tokyo University of Science (Japan); Ashizawa, Daisuke; Ohta, Ryo [Department of Biochemistry, Faculty of Pharmaceutical Sciences, Tokyo University of Science, 2641 Yamazaki, Noda, Chiba 278-0022 (Japan); Abe, Hideaki [Genome and Drug Research Center, Tokyo University of Science (Japan); Department of Biochemistry, Faculty of Pharmaceutical Sciences, Tokyo University of Science, 2641 Yamazaki, Noda, Chiba 278-0022 (Japan); Tanuma, Sei-ichi, E-mail: tanuma@rs.noda.tus.ac.jp [Genome and Drug Research Center, Tokyo University of Science (Japan); Department of Biochemistry, Faculty of Pharmaceutical Sciences, Tokyo University of Science, 2641 Yamazaki, Noda, Chiba 278-0022 (Japan)

    2010-02-19

    Poly(ADP-ribosyl)ation, which is mainly regulated by poly(ADP-ribose) polymerase (PARP) and poly(ADP-ribose) glycohydrolase (PARG), is a unique protein modification involved in cellular responses such as DNA repair and replication. PARG hydrolyzes glycosidic linkages of poly(ADP-ribose) synthesized by PARP and liberates ADP-ribose residues. Recent studies have suggested that inhibitors of PARG are able to be potent anti-cancer drug. In order to discover the potent and specific Inhibitors of PARG, a quantitative and high-throughput screening assay system is required. However, previous PARG assay systems are not appropriate for high-throughput screening because PARG activity is measured by radioactivities of ADP-ribose residues released from radioisotope (RI)-labeled poly(ADP-ribose). In this study, we developed a non-RI and quantitative assay system for PARG activity based on dot-blot assay using anti-poly(ADP-ribose) and nitrocellulose membrane. By our method, the maximum velocity (V{sub max}) and the michaelis constant (k{sub m}) of PARG reaction were 4.46 {mu}M and 128.33 {mu}mol/min/mg, respectively. Furthermore, the IC50 of adenosine diphosphate (hydroxymethyl) pyrrolidinediol (ADP-HPD), known as a non-competitive PARG inhibitor, was 0.66 {mu}M. These kinetics values were similar to those obtained by traditional PARG assays. By using our assay system, we discovered two novel PARG inhibitors that have xanthene scaffold. Thus, our quantitative and convenient method is useful for a high-throughput screening of PARG specific inhibitors.

  20. Detection of mutation in embB gene of Mycobacterium tuberculosis from clinical isolates of tuberculous patients in China by means of reverse-dot blot hybridization

    Institute of Scientific and Technical Information of China (English)

    XUE QIONG WU; YANG LU; JIAN QIN LIANG; JUN XIAN ZHANG; GUANG YU ZHANG; CUI HUAN L(U); HONG MIN LI; BEI CHUAN DING

    2006-01-01

    The relationship between embB mutation of Mycobacterium tuberculosis and ethambutol (EMB) resistance of the clinical isolates of tuberculous patients in China was investigated by reversedot blot hybridization (RDBH) in addition to evaluating the clinical value with application of PCR-RD-BH technique to detect EMB resistance. In the present study, the genotypes of the 258 bp fragments of embB genes from 196 clinical isolates of M. tuberculosis were analysed with RDBH and DNA sequencing. It was demonstrated that 60 out of 91 phenotypically EMB-resistant isolates (65.9%) showed 5 types of missense mutations at codon 306 of embB gene, resulting in the replacement of the Met residue of the wild type strain with Val, Ile or Leu residues. In these mutations, the GTP mutation (38/91,41.8% ) and the ATA mutation ( 16/91, 17.6% ) were the most encountered genotypes. The embB mutation at codon 306 could also be found in 69 isolates of phenotypically EMB-sensitive but resistant to other anti-tuberculous drugs, but no such gene mutation could be found in 36 strains of drug-sensitive isolates. Meanwhile, the concordance with the results of DNA sequencing for one wide-type probe and 5 probes for specific mutations was 100%. It was concluded that the EMB-resistance occurring in most M. tuberculosis is due to appearance of embB mutation at codon 306, and the PCR-RDBH assay was proved to be a rapid, simple and reliable method for the detection of gene mutations, which might be a good alternative for the drug-resistance screening.

  1. Unprecedented Fires in Southern Africa

    Science.gov (United States)

    2002-01-01

    The fires that raged across southern Africa this August and September produced a thick 'river of smoke' over the region. NASA-supported studies currently underway on the event will contribute to improved air pollution policies in the region and a better understanding of its impact on climate change. This year the southern African fire season peaked in early September. The region is subject to some of the highest levels of biomass burning in the world. The heaviest burning was in western Zambia, southern Angola, northern Namibia, and northern Botswana. Some of the blazes had fire fronts 20 miles long that lasted for days. In this animation, multiple fires are burning across the southern part of the African continent in September 2000. The fires, indicated in red, were observed by the Advanced Very High Resolution Radiometer (AVHRR) instrument on board the NOAA-14 satellite. The fires generated large amounts of heat-absorbing aerosols (the dark haze), which were observed with the Earth Probe Total Ozone Mapping Spectrometer (TOMS) instrument. These observations were collected as part of a NASA-supported field campaign called SAFARI 2000 (Southern African Regional Science Initiative). The recent six-week 'dry-season' portion of this experiment was planned to coincide with the annual fires. SAFARI 2000 planners tracked the changing location of fires with daily satellite maps provided by researchers at NASA's Goddard Space Flight Center. 'Every year African biomass burning greatly exceeds the scale of the fires seen this year in the western United States,' says Robert Swap of the University of Virginia, one of the campaign organizers. 'But the southern African fire season we just observed may turn out to be an extreme one even by African standards. It was amazing how quickly this region went up in flames.' The thick haze layer from these fires was heavier than campaign participants had seen in previous field studies in the Amazon Basin and during the Kuwati oil fires

  2. Inmunoglobulina G Anti Helicobacter Pylori por Elisa y Western-blot en pacientes del Servicio de Gastroenterología del Hospital San Vicente de Paúl, Heredia

    Directory of Open Access Journals (Sweden)

    Eugenia Ma Quintana Guzmán

    2000-03-01

    Full Text Available Justificación y Objetivo: En Costa Rica el cáncer gástrico es una de las malignidades más frecuentes y de la mayor mortalidad y otros estudios han encontrado asociación entre este y el Helicobacter pylori. Esta bacteria es capaz de producir sustancias que alteran la mucosa gástrica, antígenos que han sido reconocidos por medio del Western-blot. El propósito de este trabajo fue realizar, por primera vez en nuestro país, un estudio de anticuerpos IgG-anti H. pylori por medio de Western-blot y lograr identificar los tipos de antígenos contra los cuales se desarrolla la respuesta inmunológica. Para ello se utilizaron sueros y cepas de H. pylori aisladas de pacientes costarricenses. Asimismo, se compararon los resultados obtenidos del Western-blot con una prueba de ELISA para determinar la sensibilidad y especificidad diagnóstica, utilizando como referencia el estudio histológico de biopsia gástrica. Métodos: Se obtuvieron muestras de biopsia gástrica y suero de 83 pacientes referidos al Servicio de Gastroscopía del Hospital San Vicente de Paúl, Heredia. A cada uno se le realizó estudio histológico de biopsia gástrica y de anticuerpos IgG-anti H. pylori, por los métodos de ELISA y Western-blot. Resultados y Conclusiones: Por Western-blot se observaron bandas de proteínas de diferentes pesos moleculares, con un predominio de antígenos de H. pylori de bajo peso molecular. El Western-blot y el ELISA presentaron sensibilidades diagnósticas del 89% y el 88% y especificades diagnósticas del 73% y el 71%, respectivamente, comparados con el estudio histológico.Background and aim: In Costa Rica the gastric cancer is the malignancy that produces more deaths. In other studies their pathology it has been associated with Helicobacter pylori. This bacteria is able to produce substances that alter the gastric mucosa, antigens that have been caracterized by Western-blot. The purpose of this study was to performed for the first time in our

  3. Photographs of the southern heavens

    CERN Document Server

    West, R M

    1975-01-01

    The 1 m Schmidt telescope of the European Southern Observatory (ESO) has been used for a number of sky surveys. In particular a main task has been an examination of the southern night sky between declinations of -20 degrees and -90 degrees . This exercise is known as the ESO(B) Survey (or Quick Blue Survey); some of the more interesting results are shown and are briefly discussed. The photographic plates used were Kodak II a-o. There are photographs of the two Magellanic Clouds and of the galaxy NGC 1313 and the globular cluster NGC 6752. A spectrogram of our Galaxy for wavelengths in the band 3900 A to 4900 A, taken with the telescope's large objective prism is also shown. (0 refs).

  4. Charnockitic magmatism in southern India

    Science.gov (United States)

    Rajesh, H. M.; Santosh, M.

    2004-12-01

    Large charnockite massifs cover a substantial portion of the southern Indian granulite terrain. The older (late Archaean to early Proterozoic) charnockites occur in the northern part and the younger (late Proterozoic) charnockites occur in the southern part of this high-grade terrain. Among these, the older Biligirirangan hill, Shevroy hill and Nilgiri hill massifs are intermediate charnockites, with Pallavaram massif consisting dominantly of felsic charnockites. The charnockite massifs from northern Kerala and Cardamom hill show spatial association of intermediate and felsic charnockites, with the youngest Nagercoil massif consisting of felsic charnockites. Their igneous parentage is evident from a combination of features including field relations, mineralogy, petrography, thermobarometry, as well as distinct chemical features. The southern Indian charnockite massifs show similarity with high-Ba-Sr granitoids, with the tonalitic intermediate charnockites showing similarity with high-Ba-Sr granitoids with low K2O/Na2O ratios, and the felsic charnockites showing similarity with high-Ba-Sr granitoids with high K2O/Na2O ratios. A two-stage model is suggested for the formation of these charnockites. During the first stage there was a period of basalt underplating, with the ponding of alkaline mafic magmas. Partial melting of this mafic lower crust formed the charnockitic magmas. Here emplacement of basalt with low water content would lead to dehydration melting of the lower crust forming intermediate charnockites. Conversely, emplacement of hydrous basalt would result in melting at higher {ie565-01} favoring production of more siliceous felsic charnockites. This model is correlated with two crustal thickening phases in southern India, one related to the accretion of the older crustal blocks on to the Archaean craton to the north and the other probably related to the collision between crustal fragments of East and West Gondwana in a supercontinent framework.

  5. Charnockitic magmatism in southern India

    Indian Academy of Sciences (India)

    H M Rajesh; M Santosh

    2004-12-01

    Large charnockite massifs cover a substantial portion of the southern Indian granulite terrain. The older (late Archaean to early Proterozoic) charnockites occur in the northern part and the younger (late Proterozoic) charnockites occur in the southern part of this high-grade terrain. Among these, the older Biligirirangan hill, Shevroy hill and Nilgiri hill massifs are intermediate charnockites, with Pallavaram massif consisting dominantly of felsic charnockites. The charnockite massifs from northern Kerala and Cardamom hill show spatial association of intermediate and felsic charnockites, with the youngest Nagercoil massif consisting of felsic charnockites. Their igneous parentage is evident from a combination of features including field relations, mineralogy, petrography, thermobarometry, as well as distinct chemical features. The southern Indian charnockite massifs show similarity with high-Ba–Sr granitoids, with the tonalitic intermediate charnockites showing similarity with high-Ba–Sr granitoids with low K2O/Na2 ratios, and the felsic charnockites showing similarity with high-Ba–Sr granitoids with high K2O/Na2O ratios. A two-stage model is suggested for the formation of these charnockites. During the first stage there was a period of basalt underplating, with the ponding of alkaline mafic magmas. Partial melting of this mafic lower crust formed the charnockitic magmas. Here emplacement of basalt with low water content would lead to dehydration melting of the lower crust forming intermediate charnockites. Conversely, emplacement of hydrous basalt would result in melting at higher fH2O favoring production of more siliceous felsic charnockites. This model is correlated with two crustal thickening phases in southern India, one related to the accretion of the older crustal blocks on to the Archaean craton to the north and the other probably related to the collision between crustal fragments of East and West Gondwana in a supercontinent framework.

  6. Youth Unemployment in Southern Europe

    OpenAIRE

    João Leão; Guida Nogueira

    2013-01-01

    The youth unemployment rate in Europe increased to very high levels after the great recession of 2008, reaching 23% in European Union and 45% in southern European countries. We examine the causes of the high youth unemployment rate which is consistently bigger than the overall unemployment rate. The empirical evidence shows that the youth unemployment rate depends crucially of the level of the overall unemployment rate and on the variation of the unemployment rate.

  7. The Southern Altiplano of Bolivia

    OpenAIRE

    Alvarez-Flores, Ricardo; Bommel, Pierre; Bourliaud, Jean; Chevarria Lazo, Marco; Cortes, Geneviève; CRUZ, Pablo; Del Castillo, C.; Gasselin, Pierre; Joffre, Richard; Leger, Francois; Nina Laura, Juan Peter; Rambal, Serge; Rivière, Gilles; Tichit, Muriel; Tourrand, Jean-François

    2015-01-01

    Quinoa has been a staple food for Andean populations for millennia. Today, it is a much-appreciated product on the international health-food, organic and fair-trade food markets. Quinoa producers in the southern Altiplano of Bolivia initiated this change approximately 40 years ago. On high desert land, they succeeded in developing a thriving agricultural crop for export. Although they enjoy lucrative niche markets, quinoa producers are not specialized farmers, nor do most of them live yearrou...

  8. Southern Great Plains Safety Orientation

    Energy Technology Data Exchange (ETDEWEB)

    Schatz, John

    2014-05-01

    Welcome to the Atmospheric Radiation Measurement (ARM) Climate Research Facility (ARM) Southern Great Plains (SGP) site. This U.S. Department of Energy (DOE) site is managed by Argonne National Laboratory (ANL). It is very important that all visitors comply with all DOE and ANL safety requirements, as well as those of the Occupational Safety and Health Administration (OSHA), the National Fire Protection Association, and the U.S. Environmental Protection Agency, and with other requirements as applicable.

  9. Classifying Southern Hemisphere extratropical cyclones

    Science.gov (United States)

    Catto, Jennifer

    2015-04-01

    There is a wide variety of flavours of extratropical cyclones in the Southern Hemisphere, with differing structures and lifecycles. Previous studies have classified these manually using upper level flow features or satellite data. In order to be able to evaluate climate models and understand how extratropical cyclones might change in the future, we need to be able to use an automated method to classify cyclones. Extratropical cyclones have been identified in the Southern Hemisphere from the ERA-Interim reanalysis dataset with a commonly used identification and tracking algorithm that employs 850hPa relative vorticity. A clustering method applied to large-scale fields from ERA-Interim at the time of cyclone genesis (when the cyclone is first identified), has been used to objectively classify these cyclones in the Southern Hemisphere. This simple method is able to separate the cyclones into classes with quite different development mechanisms and lifecycle characteristics. Some of the classes seem to coincide with previous manual classifications on shorter timescales, showing their utility for climate model evaluation and climate change studies.

  10. Southern Appalachian Regional Seismic Network

    International Nuclear Information System (INIS)

    The seismic activity in the southern Appalachian area was monitored by the Southern Appalachian Regional Seismic Network (SARSN) since late 1979 by the Center for Earthquake Research and Information (CERI) at Memphis State University. This network provides good spatial coverage for earthquake locations especially in east Tennessee. The level of activity concentrates more heavily in the Valley and Ridge province of eastern Tennessee, as opposed to the Blue Ridge or Inner Piedmont. The large majority of these events lie between New York - Alabama lineament and the Clingman/Ocoee lineament, magnetic anomalies produced by deep-seated basement structures. Therefore SARSN, even with its wide station spacing, has been able to define the essential first-order seismological characteristics of the Southern Appalachian seismic zone. The focal depths of the southeastern U.S. earthquakes concentrate between 8 and 16 km, occurring principally beneath the Appalachian overthrust. In cross-sectional views, the average seismicity is shallower to the east beneath the Blue Ridge and Piedmont provinces and deeper to the west beneath the Valley and Ridge and the North American craton. Results of recent focal mechanism studies by using the CERI digital earthquake catalog between October, 1986 and December, 1991, indicate that the basement of the Valley and Ridge province is under a horizontal, NE-SW compressive stress. Right-lateral strike-slip faulting on nearly north-south fault planes is preferred because it agrees with the trend of the regional magnetic anomaly pattern

  11. Agro-fuels: southern impacts

    International Nuclear Information System (INIS)

    At a time of controversies about global warming, agro-fuels production is often presented as a future solution for automotive fuels and as a new way of development for southern countries. However, in Asia, South America and Africa, it very often takes the form of huge mono-culture areas of sugar cane, palm oil and soy bean in the hands of multinational companies of the agriculture and food industry. The consequences of these land, social and environmental impacts in Southern countries is an increase of disequilibria and a threat for the diet of local populations by changing the appropriation of lands. Deforestation, private monopolization of lands, concentration of profits, soils and water pollution, biodiversity impoverishment, exploitation of vulnerable manpower, populations migration, violation of human rights are today the consequences of mass production of agro-fuels in Southern countries. To what conditions a fair re-appropriation and a sustainable development of agro-fuels production and consumption is foreseeable? The solutions require a re-shaping of economical and agricultural politics. The book gathers testimonies and analyses from specialists who have evaluated locally the consequences of these energy choices. (J.S.)

  12. Venomous snakebites in southern Croatia.

    Science.gov (United States)

    Luksić, Boris; Bradarić, Nikola; Prgomet, Sandra

    2006-03-01

    This retrospective study is based on the analysis of 542 snakebite envenomation cases in southern Croatia, which were treated in the University Hospital Split over the period of 21 years. The aim of this study was to determine the incidence of venomous snakebite in southern Croatia, epidemiological and clinical features of snakebite and treatment in the region. The mean annual snakebite incidence in southern Croatia was 5.2 per 100,000 inhabitants. The nose- horned viper (Vipera ammodytes) was responsible for most bites, only a small proportion being inflicted by the adder (Vipera berus). People of all ages were affected (1 - 82 year old), but the bites were more frequent in individuals older than 50 (46% of the cases) and in children and adolescents 19 year old and younger (27% of the cases). Most snakebite accidents happened in warm spring and summer months, the highest number occurring in May (22%). A majority of the victims were rural people engaged in agricultural activities. Bites on the upper limbs were more frequent (57%) than bites on the lower limbs (42%). With regard to envenomation severity, there were 15.1% minor, 40.5% mild, 26% moderate and 18% severe cases. Two victims died (0.4%). The antivenom produced by the Institute of Immunology in Zagreb was given to virtually all patients, and complications following its administration were rare. The antivenom was used more often than it was suggested by the symptoms present. PMID:16617597

  13. Atmospheric Chemistry Over Southern Africa

    Science.gov (United States)

    Gatebe, Charles K.; Levy, Robert C.; Thompson, Anne M.

    2011-01-01

    During the southern African dry season, regional haze from mixed industrial pollution, biomass burning aerosol and gases from domestic and grassland fires, and biogenic sources from plants and soils is worsened by a semi-permanent atmosphere gyre over the subcontinent. These factors were a driver of several major international field campaigns in the 1990s and early 2000s, and attracted many scientists to the region. Some researchers were interested in understanding fundamental processes governing chemistry of the atmosphere and interaction with climate change. Others found favorable conditions for evaluating satellite-derived measurements of atmospheric properties and a changing land surface. With that background in mind a workshop on atmospheric chemistry was held in South Africa. Sponsored by the International Commission for Atmospheric Chemistry and Global Pollution (ICACGP; http://www.icacgp.org/), the workshop received generous support from the South African power utility, Eskom, and the Climatology Research Group of the University of the Witwatersrand, Johannesburg, South Africa. The purpose of the workshop was to review some earlier findings as well as more recent findings on southern African climate vulnerability, chemical changes due to urbanization, land-use modification, and how these factors interact. Originally proposed by John Burrows, president of ICACGP, the workshop was the first ICACGP regional workshop to study the interaction of air pollution with global chemical and climate change. Organized locally by the University of the Witwatersrand, the workshop attracted more than 60 delegates from South Africa, Mozambique, Botswana, Zimbabwe, France, Germany, Canada, and the United States. More than 30 presentations were given, exploring both retrospective and prospective aspects of the science. In several talks, attention was focused on southern African chemistry, atmospheric pollution monitoring, and climate processes as they were studied in the field

  14. Thunderstorms caused by southern cyclones in Estonia

    Directory of Open Access Journals (Sweden)

    Kaupo Mändla

    2014-05-01

    Full Text Available The relationships between the frequency and duration of thunderstorms, lightning and southern cyclones over Estonia are presented for the period 1950–2010. A total of 545 southern cyclones and 2106 thunderstorm days were detected, whereas 11.3% of the observed thunder days were associated with southern cyclones. At the same time, 29.2% of all southern cyclones were accompanied by thunderstorms. In the thunder season, however, this percentage was much higher, reaching up to 80% in summer months. The number of thunder days was largest when the centres of southern cyclones passed a measuring station at a distance less than 500 km. The number of cloud-to-ground lightning strikes related to southern cyclones was larger than that of any other thunder events. The results of our study demonstrate that the intensity of thunderstorms related to southern cyclones is higher than that of other thunderstorms. Correlation analysis revealed statistically significant relationships between the frequency of thunder days related to southern cyclones and the frequency of southern cyclones, also between the frequency of thunder days related to southern cyclones and days of other thunder events.

  15. Evaluación de las pruebas dot blot y aglutinación de látex para el diagnóstico de cisticercosis en Perú

    Directory of Open Access Journals (Sweden)

    Eduardo Miranda-Ulloa

    2014-04-01

    Full Text Available Con el objetivo de evaluar las pruebas dot blot y aglutinación de látex para la detección de cisticercosis humana con antígeno de líquido de cisticerco de Taenia solium, se usaron 125 sueros humanos, de los cuales 60 procedían de personas con cisticercosis confirmada por Western Blot, 45 de personas con otras enfermedades parasitarias y 20 de personas aparentemente sanas. La concentración óptima del antígeno para impregnar las tiras dot blot fue de 0,01 ug/uL, y para impregnar las partículas de látex fue de 0,092 ug/uL. Para la prueba dot blot se encontró una sensibilidad del 100% y especificidad del 87,7%; para la aglutinación de látex una sensibilidad del 93,3% y especificidad del 89,2%. Ambas pruebas podrían ser de utilidad y factibles de implementar como alternativas de diagnóstico serológico en laboratorios de áreas endémicas del Perú

  16. Western blot used for detection of syphilis antibodies and its evaluation%免疫印迹法检测梅毒抗体及评价

    Institute of Scientific and Technical Information of China (English)

    曹谊; 金一鸣; 董丽; 江妮娜; 厦伟凤

    2011-01-01

    目的 建立梅毒抗体免疫印迹法(TP-WB)检测梅毒(TP),并对其效果进行评价.方法 对第1组(13份)用甲苯胺红不加热试验与酶联免疫吸附试验法检测和第2组(28份)对双酶联免疫吸附试验法筛检的可疑样本进行明胶颗粒凝集试验与TP-WB方法确证检测并比较.结果 两组用明胶颗粒凝集试验确证分别为6例阳性、2例可疑、5例阴性和12例阳性、2例可疑、14例阴性,阳性率为46.2%、42.9%;而用TP-WB法检测分别为11例阳性、2例可凝和18例阳性、2例可凝、8例阴性阳性率为84.6%、64.3%.结论 TP-WB法操作简便,结果易观察,无需特殊设备,灵敏度特异性好,更适宜各级实验室梅毒确证检测.%OBJECTIVE To set up western blot method for the detection of syphilis antibodies and evaluate its effect. METHODS Gelatin particle agglutination test was conducted towards the following two groups, 13 shares in Group 1 adopted Toluidine red non-heating test and enzyme-linked immunity and adsorption assay test; 28 shares of spacious samples in Group 2 screened by double enzyme-linked immunity and adsorption assay test performed the gelatin particle agglutination test and confirmatory test and compared the above mentioned test with TP-WB method toward two groups. RESULTS The confirmatory results obtained through gelatin particle agglutination test were 6 cases positive* 2 cases suspicious, 5 cases negative and 12 cases positive, 2 cases suspicious, 14 cases negative; the positive rates were 46. 2% , 42. 9% ; while the results obtained through TP-WB were 11 cases positive, 2 cases suspicious, and 18 cases positive, 2 cases suspicious, 8 cases negative; the positive rates were 78. 4%, 64. 3%. CONCLUSION TP-WB method is simple in operation, easy to observe the results without special equipments, good at sensitivity and specificity, and more suitable for syphilis confirmatory test in all levels of laboratory.

  17. ANALYSIS OF Treponema pallidum RECOMBINANT ANTIGENS FOR DIAGNOSIS OF SYPHILIS BY WESTERN BLOTTING TECHNIQUE Análise de antígenos recombinantes de Treponema pallidum no diagnóstico da sífilis utilizando a técnica de Western Blotting

    Directory of Open Access Journals (Sweden)

    Neuza Satomi SATO

    1999-03-01

    Full Text Available Three GST fusion recombinant antigen of Treponema pallidum, described as GST-rTp47, GST-rTp17 and GST-rTp15 were analyzed by Western blotting techniques. We have tested 53 serum samples: 25 from patients at different clinical stages of syphilis, all of them presenting anti-treponemal antibody, 25 from healthy blood donors and three from patients with sexually transmitted disease (STD other than syphilis. Almost all samples from patients with syphilis presented a strong reactivity with GST-rTp17 antigen. Some samples were non-reactive or showed a weak reaction with GST-rTp47 and/or GST-rTp15, and apparently there was no correlation with the stage of disease. There was no seropositivity among blood donors. No sample reacted with purified GST. We concluded that due to their specificity these recombinant antigens can be used as GST fusion protein for development of syphilis diagnostic assays.Os antígenos recombinantes de Treponema pallidum GST-rTp47, GST-rTp17 e GST-rTp15, produzidos em fusão com glutationa S-transferase (GST em E. coli, foram analisados quanto ao potencial diagnóstico da sífilis pela técnica de Western blotting. Foram testadas 53 amostras, sendo 25 de pacientes em diferentes estágios clínicos da sífilis, com resultados positivos no teste treponêmico clássico; 25 amostras procedentes de doadores de banco de sangue, com sorologia negativa e 3 de pacientes com doença sexualmente transmissível não relacionado à sífilis. Todas as amostras de pacientes com sífilis apresentaram alta reatividade com o antígeno GST-rTp17. Quanto aos antígenos GST-rTp47 e GST-Tp15 verificou-se uma variação na presença ou na intensidade da reação em diferentes amostras de pacientes com sífilis, sem mostrar correlação com o estágio da doença. Nenhuma reatividade contra quaisquer desses antígenos foi observada com as amostras do grupo controle. Nenhuma das amostras testadas apresentaram reatividade com a GST purificada. A

  18. Rural migration in southern Nevada

    International Nuclear Information System (INIS)

    This study reviews the history of migration in two rural counties in Southern Nevada. It is part of a larger study about the impact of a proposed high-level nuclear waste repository on, in and out-migration patterns in the state. The historical record suggests a boom and bust economic cycle has predominated in the region for the past century creating conditions that should be taken into account, by decision makers, when ascertaining the long-term impacts of the proposed repository

  19. Rural migration in southern Nevada

    Energy Technology Data Exchange (ETDEWEB)

    Mosser, D.; Soden, D.L.

    1993-08-01

    This study reviews the history of migration in two rural counties in Southern Nevada. It is part of a larger study about the impact of a proposed high-level nuclear waste repository on in- and out-migration patterns in the state. The historical record suggests a boom and bust economic cycle has predominated in the region for the past century creating conditions that should be taken into account by decision makers when ascertaining the long-term impacts of the proposed repository.

  20. Cold war in Southern Africa : review article

    OpenAIRE

    Graham, Matthew

    2010-01-01

    1. Gary Baines, Peter Vale (eds.) (2008), Beyond the Border War: New Perspectives on Southern Africa's Late-Cold War Conflicts, Pretoria: Unisa Press, ISBN 978-1-86888-456-8, xix + 342 pp. 2. Sue Onslow (ed.) (2009), Cold War in Southern Africa: White Power, Black Liberation, Abingdon: Routledge, ISBN 978-0-415-47420-7, 253 pp. 3. Vladimir Shubin (2008), The Hot "Cold War": The USSR in Southern Africa, London: Pluto Press, ISBN 978-0745324722, 320 pp.

  1. Seismicity of southern Lake Tanganyika

    Science.gov (United States)

    Lavayssiere, A.; Gallacher, R. J.; Keir, D.; Ebinger, C. J.; Drooff, C.; Khalfan, M.; Bull, J. M.

    2015-12-01

    Global seismic networks document frequent and unusually deep earthquakes in East African rift sectors lacking central volcanoes. The deep seismicity means that we can use earthquakes to probe the geometry and kinematics of fault systems throughout the crust, and to understand the distribution of strain between large offset border fault systems and intrabasinal faults. The southern Tanganyika rift zone has the highest seismicity rate within East Africa during the period 1973-present, yet earlier temporary seismometer networks have been too sparse in space and time to relocate earthquakes with location and depth errors of Lake Tanganyika since June 2014 using a network at 12 broadband seismic stations. The distribution of earthquakes shows that deformation primarily occurs on large offset border faults beneath the lake. Subsidiary earthquake activity occurs along the subparrallel Rukwa graben, and beneath the NE-SW striking Mweru rift. The distribution of earthquakes suggests the southern end of lake Tanganyika is characterized by a network of intersecting NNW and NE striking faults. The depths of earthquakes are distributed throughout the crust, consistent with the relatively strong lithosphere.

  2. Southern Africa CTA Site Proposal

    CERN Document Server

    Krüger, P P

    2012-01-01

    Southern Africa has some of the world's best sites for air Cherenkov telescopes. South Africa has only one viable site, which is south of Sutherland and also close to the Southern African Large Telescope (SALT). This site has very good infrastructure and is easy to access, but only 47% of the night-time has a cloudless sky usable for observations. Namibia, which already hosts the H.E.S.S telescope, has a number of potential sites with much less cloud coverage. The H.E.S.S. site is one of the highest of these sites at 1840 m a.s.l. with about 64% of the night-time cloudless. It also has very low night sky background levels and is relatively close (about 100 km) to Windhoek. Moving further away from Windhoek to the south, the cloud coverage and artificial night sky brightness becomes even less, with the site at Kuibis (between Keetmanshoop and Luderitz) at 1640 m a.s.l. having clear night skies 73% of the time. Even though this site seems remote (being 660 km from Windhoek by road), it is close to the national ...

  3. Transcription factor proteomics: identification by a novel gel mobility shift-three-dimensional electrophoresis method coupled with southwestern blot and high-performance liquid chromatography-electrospray-mass spectrometry analysis.

    Science.gov (United States)

    Jiang, Daifeng; Jia, Yinshan; Jarrett, Harry W

    2011-09-28

    Transcription factor (TF) purification and identification is an important step in elucidating gene regulatory mechanisms. In this study, we present two new electrophoretic mobility shift assay (EMSA)-based multi-dimensional electrophoresis approaches to isolate and characterize TFs, using detection with either southwestern or western blotting and HPLC-nanoESI-MS/MS analysis for identification. These new techniques involve several major steps. First, EMSA is performed with agents that diminish non-specific DNA-binding and the DNA-protein complex is separated by native PAGE gel. The gel is then electrotransferred to PVDF membrane and visualized by autoradiography. Next, the DNA-protein complex, which has been transferred onto the blot, is extracted using a detergent-containing elution buffer. Following detergent removal, concentrated extract is separated by SDS-PAGE (EMSA-2DE), followed by in-gel trypsin digestion and HPLC-nanoESI-MS/MS analysis, or the concentrated extract is separated by two-dimensional gel electrophoresis (EMSA-3DE), followed by southwestern or western blot analysis to localize DNA binding proteins on blot which are further identified by on-blot trypsin digestion and HPLC-nanoESI-MS/MS analysis. Finally, the identified DNA binding proteins are further validated by EMSA-immunoblotting or EMSA antibody supershift assay. This approach is used to purify and identify GFP-C/EBP fusion protein from bacterial crude extract, as well as purifying AP1 and CEBP DNA binding proteins from a human embryonic kidney cell line (HEK293) nuclear extract. AP1 components, c-Jun, Jun-D, c-Fos, CREB, ATF1 and ATF2 were successfully identified from 1.5 mg of nuclear extract (equivalent to 3×10(7) HEK293 cells) with AP1 binding activity of 750 fmol. In conclusion, this new strategy of combining EMSA with additional dimensions of electrophoresis and using southwestern blotting for detection proves to be a valuable approach in the identification of transcriptional complexes

  4. Plutonium in Southern Hemisphere ocean Waters

    DEFF Research Database (Denmark)

    Hirose, K.; Aoyama, M.; Gastaud, J.;

    2013-01-01

    Plutonium in seawater collected by the BEAGLE2003 cruise was determined using ICP- SF-MS and alpha spectrometry after Fe co-precipitation and radiochemical purification. Levels and distributions of dissolved plutonium activity concentrations in Southern Hemisphere ocean waters are summarized here...... of the dominant factors controlling plutonium distributions in the Southern Hemisphere oceans is biogeochemical processes including particle scavenging....

  5. Seroepidemiology of leptospirosis in southern Vietnamese children

    NARCIS (Netherlands)

    K.T.D. Thai; T.Q. Binh; P.T. Giao; H.L. Phuong; L.Q. Hung; N. van Nam; T.T. Nga; M.G.A. Goris; P.J. de Vries

    2006-01-01

    Objective: To estimate the seroprevalence of human leptospirosis in southern Vietnam. Methods: All pupils (n = 961) of two primary schools in two communes in southern Vietnam were screened for the presence of serum Leptospira immunoglobulin (Ig)G. Leptospira IgM was tested in 92 randomly selected sa

  6. Evaluación diagnóstica de fracciones cromatográficas de Fasciola hepatica mediante Western Blot y ELISA en animales infectados Diagnostic evaluation of chromatographic fractions of Fasciola hepatica by Western Blot and ELISA in infected animals

    Directory of Open Access Journals (Sweden)

    F. FREDES

    1997-01-01

    Full Text Available La fasciolosis causada por Fasciola hepatica se diagnostica rutinariamente mediante el examen coprológico. Debido a que este examen no es 100% sensible y además es ineficaz en la etapa pre-patente, se realizó este trabajo con el objeto de caracterizar y seleccionar fracciones antigénicas de valor diagnóstico de extractos de excreción-secreción del parásito. Se utilizó cromatografía de exclusión por tamaño molecular (Sephacryl S-300, electroforesis en geles de poliacrilamida en ambiente reductor (SDS-PAGE y posterior western blot (WB, además de un método de "enzyme-linked immuno-sor-bent assay" (ELISA en microplaca. Para evaluar el valor diagnóstico de los antígenos se usaron sueros de las especies ovina, porcina y equina en tres estados (sanos, con otras parasitosis y naturalmente infectados con F. hepatica. Mediante el método cromatográfico se obtuvieron hasta 5 "peaks", que interpolados en una curva patrón representaron polipéptidos de pesos aproximados de 2.000, 400, 150, 29 y menores a 29 kDa. De éstos, los inmunorreactivos específicos para la enfermedad en las tres especies animales, bajo los criterios de SDS-PAGE y posterior WB, fueron los de 400, 150, 29 y The antigenic components of excretory-secretory products of adult F. hepatica, were separated by gel filtration chromatography (Sephacryl S-300 and then analized by polyacrylamide gel electrophoresis (SDS-PAGE, followed by Western Blot (WB. In order to evaluate the sensitivity, specificity and predictive value of the selected fractions an enzyme-linked immunosorbent assay (ELISA was used with sera from sheep, swine and horses infected with F. hepatica, as well as with control sera (uninfected animals. The chromatographic curve presented up to 5 peaks, representing polypeptides with a molecular weight of 2000, 400, 150, 29 and less than 29 kDa, according to the interpolation with a standard curve of commercial polypeptide molecular weights. The results obtained with

  7. Southern Energy Efficiency Center (SEEC)

    Energy Technology Data Exchange (ETDEWEB)

    Vieira, Robin; Sonne, Jeffrey; Withers, Charles; Cummings, James; Verdict, Malcolm; Roberts, Sydney

    2009-09-30

    The Southern Energy Efficiency Center (SEEC) builds collaborative partnerships with: state and local governments and their program support offices, the building delivery industry (designers, contractors, realtors and commissioning agents), product manufacturers and their supply chains, utilities and their program implementers, consumers and other stakeholders in order to forge a strong regional network of building energy efficiency allies. Through a project Steering Committee composed of the state energy offices and building industry stakeholders, the SEEC works to establish consensus-based goals, priorities and strategies at the regional, state and local levels that will materially advance the deployment of high-performance “beyond code” buildings. In its first Phase, SEEC will provide limited technical and policy support assistance, training, certification and education to a wide spectrum of the building construction, codes and standards, and the consumer marketplace.

  8. Southern Mexico Miocene Magmatic Activity

    Science.gov (United States)

    Layer, P.

    2006-12-01

    Magmatic activity in southern Mexico have been occurred in three important volcanic regions: Los Tuxtlas Volcanic Field (TVF), Chiapanecan Volcanic Arc (CVA), and Tacaná Volcanic Complex (TVC). This activity produce alkaline and calc-alkaline products. The TVF has been active since 7 Ma ago producing Na-alkaline basanite, trachybasalt, and trachyandesite (41 63 wt% SiO2), and calc-alkaline basalts, basaltic-andesites, and andesites (45 63 wt% SiO2). The CVA including El Chichon Volcano produced calc-alkaline magmas varying from andesites to dacites (57 65 wt% SiO2) emitted between 2100 ka ago (Tzontehuitz) to 225 ka and K-alkaline magmas emitted from 1.1 Ma ago (trachybasalt, 46 51 wt% SiO2) to the Recent (trachyandesite, 57 63 wt% SiO2). The TVC emitted calc-alkaline products varying from basaltic-andesite (52 57 wt% SiO2) as mafic enclaves, andesites (57 63 wt% SiO2), and dacites (63 68 wt% SiO2). El Chichón and TVF present slight enrichments in K2O, Na2O, Rb, Sr, Th, U, Cs, and LREE respect to TVC, these are signatures related to subduction environment. The presence of alkaline magmas at El Chichón and TVF correspond to mantle low degree melts that reach the surface along with calc-alkaline lavas due to a tensional stress field that allows their pass to the surface. In the generation of the magmas of southern Mexico three components are involved: mantle partial melting fluids, fluid from subducted lithosphere, and continental crust, likely interacting in different ratios through time and in different proportions from SW to NE.

  9. Rice market integration in southern Sumatra, Indonesia

    Directory of Open Access Journals (Sweden)

    Yetty Oktarina

    2015-12-01

    Full Text Available This paper investigates rice market integration among five provinces in southern Sumatra using data from monthly retail rice markets during 2004-2009. The degree of integration was measured across provinces using vector error correction model. Result revealed that there is spatial market integration in southern Sumatra. Province of Bangka Belitung can make price adjustment more quickly compared to others provinces. In the long run period, rice price in Jambi province, Lampung province, and Bangka Belitung province became a reference price of rice in southern Sumatra. The study suggests policy recommendation for government to intervention this situation.

  10. Southern Impact Testing Alliance (SITA)

    Science.gov (United States)

    Hubbs, Whitney; Roebuck, Brian; Zwiener, Mark; Wells, Brian

    2009-01-01

    Efforts to form this Alliance began in 2008 to showcase the impact testing capabilities within the southern United States. Impact testing customers can utilize SITA partner capabilities to provide supporting data during all program phases-materials/component/ flight hardware design, development, and qualification. This approach would allow programs to reduce risk by providing low cost testing during early development to flush out possible problems before moving on to larger scale1 higher cost testing. Various SITA partners would participate in impact testing depending on program phase-materials characterization, component/subsystem characterization, full-scale system testing for qualification. SITA partners would collaborate with the customer to develop an integrated test approach during early program phases. Modeling and analysis validation can start with small-scale testing to ensure a level of confidence for the next step large or full-scale conclusive test shots. Impact Testing Facility (ITF) was established and began its research in spacecraft debris shielding in the early 1960's and played a malor role in the International Space Station debris shield development. As a result of return to flight testing after the loss of STS-107 (Columbia) MSFC ITF realized the need to expand their capabilities beyond meteoroid and space debris impact testing. MSFC partnered with the Department of Defense and academic institutions as collaborative efforts to gain and share knowledge that would benefit the Space Agency as well as the DoD. MSFC ITF current capabilities include: Hypervelocity impact testing, ballistic impact testing, and environmental impact testing.

  11. Experimental late brood surveys: Southern Saskatchewan: 1991

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — This report summarizes the late brood surveys for southern Saskatchewan during 1991. Survey methods, weather and habitat conditions, production indices, and tables...

  12. Southern Watersheds Common Reedgrass Project Progress Report

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — The Southern Watersheds includes the drainages of the Northwest River, the North Landing River, and Back Bay in the southeastern corner of Virginia. Common...

  13. Arctic and Southern Ocean Sea Ice Concentrations

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Monthly sea ice concentration for Arctic (1901 to 1995) and Southern oceans (1973 to 1990) were digitized on a standard 1-degree grid (cylindrical projection) to...

  14. Southern Hemisphere Ice Limits, 1973-1978

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Weekly Southern Ocean ice limits, have been digitized from U.S. Navy Fleet Weather Facility ice charts, at the Max-Planck Institut fur Meteorologie, Hamburg....

  15. Southern Watersheds Common Reedgrass Monitoring Plan

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — The Southern Watersheds Common Reedgrass Project is an interagency effort to increase public awareness of the common reedgrass problem, demonstrate effective...

  16. Waterfowl breeding population survey: Southern Saskatchewan: 1979

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — This report summarizes the Waterfowl Breeding Population and Habitat Survey for southern Saskatchewan during 1979. The primary purpose of the survey is to provide...

  17. Residential Segregation in Southern Cities: 1970

    Science.gov (United States)

    And Others; Roof, Wade Clark

    1976-01-01

    Based on an analysis of the age, size, percent black, and occupational income differential in 32 southern cities, the findings show that age is still the strongest predictor of residential segregation. (Author)

  18. Marine Invertebrate assemblages in southern California

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This is a point file of invertebrate site clusters calculated from benthic trawls completed by the Southern California Coastal Water Research Project (SCCWRP). Data...

  19. Nearshore marine fish assemblages in southern California

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Fish benthic trawls were completed by the Southern California Coastal Water Research Project (SCCWRP). Data from 425 fisheries independent trawls ranging from 2-215...

  20. Fish assemblages in southern California kelp forests.

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This is a point file of fish assemblages calculated from diver surveys in kelp forests in Southern California. Visual census data was combined for two separate...

  1. Waterfowl production survey: Southern Saskatchewan: 1982

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — This report summarizes the Waterfowl Production and Habitat Survey for southern Saskatchewan during 1982. The primary purpose of the survey is to provide...

  2. Waterfowl breeding population survey: Southern Saskatchewan: 1999

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — This report summarizes the Waterfowl Breeding Population and Habitat Survey for southern Saskatchewan during 1999. The primary purpose of the survey is to provide...

  3. Ethnobotanical remarks on Central and Southern Italy

    OpenAIRE

    Lucia Leporatti; Guarrera Paolo

    2007-01-01

    Abstract Background The present paper is a brief survey on the ethnobotanical works published by the Authors since 1981, concerning the research carried out in some southern and central Italian regions. Before Roman domination these territories were first inhabited by local people, while the southern areas were colonized by the Greeks. These different cultural contributions left certain traces, both in the toponyms and in the vernacular names of the plants and, more generally, in the culture ...

  4. Southern Bohemian route of industrial heritage

    OpenAIRE

    Vladimír Dvořák; Blažena Gehinová; Dagmar Škodová Parmová; Eva Jaderná; Eduard Šitler

    2009-01-01

    This paper deals with the industrial heritage and its usage in the frame of tourism service supply. There were three so called Anchor Points selected based on the ERIH methodology in the southern Bohemia. And there were also other regional and important places and points named for the future tourist route. The Southern Bohemian Route of Industrial Heritage was invented around the Anchor Point of Schwarzenberg Channel because of its importance in European heritage and its location next to the ...

  5. Climatically driven fluctuations in Southern Ocean ecosystems

    OpenAIRE

    Murphy, Eugene J.; Trathan, Philip N; Watkins, Jon L.; Reid, Keith; Meredith, Michael P.; Forcada, Jaume; Thorpe, Sally E.; Johnston, Nadine M; Rothery, Peter

    2007-01-01

    Determining how climate fluctuations affect ocean ecosystems requires an understanding of how biological and physical processes interact across a wide range of scales. Here we examine the role of physical and biological processes in generating fluctuations in the ecosystem around South Georgia in the South Atlantic sector of the Southern Ocean. Anomalies in sea surface temperature (SST) in the South Pacific sector of the Southern Ocean have previously been shown to be generated through atmosp...

  6. ENVIRONMENT, INCOME, AND DEVELOPMENT IN SOUTHERN AFRICA

    OpenAIRE

    Chapman, Duane

    1993-01-01

    It is widely believed that rural forest and agricultural resources in Southern Africa are overused, in the sense that both biomass and harvest levels are significantly below levels of maximum sustainable yield. However, economic theory suggests that high interest and time preference rates cause the economic optimum to coincide with generally-observed patterns. In addition, low income may be the driving factor behind high interest and time preference rates. In macro-economic terms, Southern Af...

  7. What Is the Southern California Earthquake Center?

    OpenAIRE

    Aki, Keiiti; Henyey, Thomas; Heaton, Thomas

    1991-01-01

    On February 11, Congressman George E. Brown, Jr., Chairman of the House Committee on Science, Space and Technology, together with the National Science Foundation, the U.S. Geological Survey, and state and local officials, helped inaugurate the Southern California Earthquake Center (SCEC) on the campus of the University of Southern California. SCEC is one of 14 new NSF Science and Technology Centers and includes a substantial commitment from the USGS for FY91. The center is a consortium of sev...

  8. Southern California Channel Islands Bibliography, through 1992

    OpenAIRE

    Channel Islands National Marine Sanctuary

    1992-01-01

    The Southern California Channel Islands Bibliography, through 1992, comprises 4035 references to the scientific literature on Southern California's Channel Islands. The Bibliography was compiled by the Channel Islands National Marine Sanctuary and is presented here in a February 1993 version. The Santa Barbara Museum of Natural History presents a California Channel Islands Bibliography on its website. It has more recent references and overlaps considerably with this bibliography. How...

  9. Grey literature revisited : the Southern African perspective

    OpenAIRE

    Moshoeshoe-Chadzingwa, M.M. (ISAS); GreyNet, Grey Literature Network Service

    1994-01-01

    Re-examines grey literature on Southern Africa. Analyzes the material from the actual geographical field of concern to determine the suitable handling approach. Asses the extent to which the politico-economic and technological changes in Southern Africa have affected this literature, in terms of its quantities, subject matter, formats, use. Determines how to instil awareness of the value of grey literature first to sub-regional information scientists who will them promote networking and secon...

  10. Education for transformative leadership in Southern Africa

    OpenAIRE

    Preece, J

    2003-01-01

    This article argues that education for transformative leadership in a southern African context needs to nurture an understanding of the relationship between spirituality and charisma. This argument is based on a review of some literature pertaining to transformative learning, transformative leadership, and African value systems. The article explores the relationship between transformative leadership and transformative learning and education theories, and relates them to a specific southern Af...

  11. Rice market integration in southern Sumatra, Indonesia

    OpenAIRE

    Yetty Oktarina

    2015-01-01

    This paper investigates rice market integration among five provinces in southern Sumatra using data from monthly retail rice markets during 2004-2009. The degree of integration was measured across provinces using vector error correction model. Result revealed that there is spatial market integration in southern Sumatra. Province of Bangka Belitung can make price adjustment more quickly compared to others provinces. In the long run period, rice price in Jambi province, Lampung province, and Ba...

  12. Changes in rRNA levels during stress invalidates results from mRNA blotting: Fluorescence in situ rRNA hybridization permits renormalization for estimation of cellular mRNA levels

    DEFF Research Database (Denmark)

    Hansen, M.C.; Nielsen, A.K.; Molin, Søren;

    2001-01-01

    Regulation of gene expression can be analyzed by a number of different techniques. Some techniques monitor the level of specific mRNA directly, and others monitor indirectly by determining the level of enzymes encoded by the mRNA. Each method has its own inherent way of normalization. When results...... obtained by these techniques are compared between experiments in which differences in growth rates, strains, or stress treatments occur, the normalization procedure may have a significant impact on the results. In this report we present a solution to the normalization problem in RNA slot blotting...

  13. 77 FR 17122 - Indiana Southern Railroad, LLC-Temporary Trackage Rights Exemption-Norfolk Southern Railway Company

    Science.gov (United States)

    2012-03-23

    ... Surface Transportation Board Indiana Southern Railroad, LLC--Temporary Trackage Rights Exemption--Norfolk Southern Railway Company Norfolk Southern Railway Company (NSR), pursuant to a written trackage rights agreement (Agreement), has agreed to grant overhead temporary trackage rights to Indiana Southern...

  14. Matrix-assisted laser desorption-ionization mass spectrometry peptide mass fingerprinting for proteome analysis: identification efficiency after on-blot or in-gel digestion with and without desalting procedures.

    Science.gov (United States)

    Lamer, S; Jungblut, P R

    2001-03-10

    In theory, peptide mass fingerprinting by matrix assisted laser desorption-ionization mass spectrometry (MALDI-MS) has the potential to identify all of the proteins detected by silver staining on gels. In practice, if the genome of the organism investigated is completely sequenced, using current techniques, all proteins stained by Coomassie Brilliant Blue can be identified. This loss of identification sensitivity of ten to hundred-fold is caused by loss of peptides by surface contacts. Therefore, we performed digestion and transfer of peptides in the lower microl range and reduced the number of steps. The peptide mix obtained from in-gel or on-blot digestion was analyzed directly after digestion or after concentration on POROS R2 beads. Eight protein spots of a 2-DE gel from Mycobacterium bovis BCG were identified using these four preparation procedures for MALDI-MS. Overall, on-blot digestion was as effective as in-gel digestion. Whereas higher signal intensities resulted after concentration, hydrophilic peptides are better detected by direct measurement of the peptide mix without POROS R2 concentration. PMID:11270870

  15. Emigration dynamics in southern Africa.

    Science.gov (United States)

    Milazi, D

    1995-01-01

    This review of the dynamics of international migration in Southern Africa focuses on four aspects of labor migration: 1) while migrant workers suffer from discrimination and lack of protection, there are few alternatives for them; 2) the regulations imposed by the Chamber of Mines in South Africa favor the mining industry at the expense of the workers; 3) worker supplier states have few options for negotiating a commercialized migration policy to achieve economic benefits; and 4) foreign mine workers must unionize in order to escape perpetual subordination. The review opens with a consideration of how migrant mine workers from Botswana, Lesotho, and Swaziland have provided a source of cheap labor which has enhanced the economic prosperity of South Africa. The role of the Chamber of Mines in regulating the supply of labor and employment policy for its members is described. Attention is then turned to Lesotho where land pressure has exacerbated poverty levels. Large-scale migration has led the citizens of Lesotho to consider it a place to live or retire to, not a place to work. Labor migration from Lesotho is organized, is supported by the government, is recurrent, and remains a viable alternative despite faltering demand. The discussion of Lesotho includes a consideration of its political, economic, and demographic situation as well as of ecological factors. Briefer analyses are then provided for Botswana, Swaziland, and Mozambique. The receiving country, South Africa, is shown to be suffering a decline in economic growth which is marked by widespread unemployment. More than 250,000 Whites are prospective emigrants from South Africa. After considering the issues surrounding refugees, regional concerns created by changing economic and political scenarios, and labor strategies which could be adopted by supplier states, the report reiterates a series of recommendations which arose from two major conferences on the problem of unemployment. It is concluded that the

  16. Indirect taxes on food in Southern Brazil

    Directory of Open Access Journals (Sweden)

    Denize Mirian da Silva

    2013-12-01

    Full Text Available The objective of this paper is to estimate the indirect tax burden on food for ten income classes, based on income and household total expenditure in southern Brazil. Thus it can be seen as indirect taxes on foods affect the monetary income and consumption pattern of households. To reach the objectives proposed, will be used the Pintos-Payeras (2008 model. The database iscomposed by microdata from the Household Budgeting Survey (POF 2008-2009 and the tax regulations of the country and the southern states of Brazil. The results show that indirect taxes on food in Southern Brazil is regressive when based on income and expenditure of household , ie , the poorest people pay proportionately more taxes and have their consumption pattern highest taxed ICMS (Brazilian value added tax is the tax that contributes most to the regressivity.

  17. The Southern Alberta Information Resources (SAIR Project

    Directory of Open Access Journals (Sweden)

    Kathy Crewdson

    2008-06-01

    Full Text Available Abstract Southern Alberta Information Resources (SAIR is a collaborative bibliography of published resources significant to southern Alberta. Objectives and progress with evolving methodology, technology, issues and challenges are explored within the context of the library field. We investigate a collaborative digital library that allows librarians and non-librarians alike to share information on specific topics through MARC records. An outcome of a collaborative digital library is how to create and sustain interest within the library community. Southern Alberta region was selected based on the authors’ familiarity with the region. Some issues and questions remain to be resolved. Digital formats present a number of challenges in terms of selection and presentation. Legal issues relating to technology such as linking and location information have emerged. Basic technical issues remain, such as, how best to update links.

  18. Adjoint tomography of the southern California crust.

    Science.gov (United States)

    Tape, Carl; Liu, Qinya; Maggi, Alessia; Tromp, Jeroen

    2009-08-21

    Using an inversion strategy based on adjoint methods, we developed a three-dimensional seismological model of the southern California crust. The resulting model involved 16 tomographic iterations, which required 6800 wavefield simulations and a total of 0.8 million central processing unit hours. The new crustal model reveals strong heterogeneity, including local changes of +/-30% with respect to the initial three-dimensional model provided by the Southern California Earthquake Center. The model illuminates shallow features such as sedimentary basins and compositional contrasts across faults. It also reveals crustal features at depth that aid in the tectonic reconstruction of southern California, such as subduction-captured oceanic crustal fragments. The new model enables more realistic and accurate assessments of seismic hazard. PMID:19696349

  19. Live Transplantation in Children Antibody Production Against ِE. Coli Polypeptide (ECP by ِDot Blotting and ELISA Methods for ECP Assay in Recombinant Drug and Patients Sera

    Directory of Open Access Journals (Sweden)

    A Rabbani

    2003-06-01

    Full Text Available Recombinant DNA technology made it possible to produce biological drugs and pharmaceutical companies produced recombinant human drugs. There have been reports on the formation of antibodies against residual host cell protein. For this reason, it is important to check the patients sera for antibodies which could possibly be induced by recombinant drug it self and/or by contaminating proteins of the host cell. The present report refers to the obtainment of polyspecific antisera directed against Escherichia coli host strain used to produce recombinant human growth hormone. The antisera were obtained by the cascade immunization method. The animals (n=3 rabbits were initially immunized with E. coli strain. The analysis of the antisera by dot blotting method showed a progressive recognition of the cascade method. These antisera were also used by ELISA methods. Results showed antibodies rising against E. coli polypeptide antigen.

  20. Presumptive detection of yellow head virus by reverse transcriptase-polymerase chain reaction and dot-blot hybridization in Litopenaeus vannamei and L. stylirostris cultured on the Northwest coast of Mexico.

    Science.gov (United States)

    de la Rosa-Vélez, J; Cedano-Thomas, Y; Cid-Becerra, J; Méndez-Payán, J C; Vega-Pérez, C; Zambrano-García, J; Bonami, J-R

    2006-12-01

    In order to assess the presence of yellow head virus (YHV) in shrimp farms along the Pacific coast of Mexico, 39 samples from 26 randomly chosen farms were analysed by means of reverse transcriptase-polymerase chain reaction (RT-PCR) and dot-blot hybridization. Eleven samples were positive for YHV. The disease was reproduced by means of an infectivity bioassay performed with an extract of pleopods from the positive samples. Cumulative mortality reached 50% in 14 days. Four pairs of primers which amplified several YHV genome regions were designed and used to test dead and surviving shrimp from the bioassay by RT-PCR, resulting in positive results for every expected amplicon. The results of this study provide presumptive evidence of the presence of YHV in Mexican shrimp farms at least during 1999-2000. PMID:17169104

  1. Southern Fireworks above ESO Telescopes

    Science.gov (United States)

    1999-05-01

    New Insights from Observations of Mysterious Gamma-Ray Burst International teams of astronomers are now busy working on new and exciting data obtained during the last week with telescopes at the European Southern Observatory (ESO). Their object of study is the remnant of a mysterious cosmic explosion far out in space, first detected as a gigantic outburst of gamma rays on May 10. Gamma-Ray Bursters (GRBs) are brief flashes of very energetic radiation - they represent by far the most powerful type of explosion known in the Universe and their afterglow in optical light can be 10 million times brighter than the brightest supernovae [1]. The May 10 event ranks among the brightest one hundred of the over 2500 GRB's detected in the last decade. The new observations include detailed images and spectra from the VLT 8.2-m ANTU (UT1) telescope at Paranal, obtained at short notice during a special Target of Opportunity programme. This happened just over one month after that powerful telescope entered into regular service and demonstrates its great potential for exciting science. In particular, in an observational first, the VLT measured linear polarization of the light from the optical counterpart, indicating for the first time that synchrotron radiation is involved . It also determined a staggering distance of more than 7,000 million light-years to this GRB . The astronomers are optimistic that the extensive observations will help them to better understand the true nature of such a dramatic event and thus to bring them nearer to the solution of one of the greatest riddles of modern astrophysics. A prime example of international collaboration The present story is about important new results at the front-line of current research. At the same time, it is also a fine illustration of a successful collaboration among several international teams of astronomers and the very effective way modern science functions. It began on May 10, at 08:49 hrs Universal Time (UT), when the Burst

  2. Faulkner's Southern belle - myth or reality?

    Directory of Open Access Journals (Sweden)

    Nataša Intihar Klančar

    2011-12-01

    Full Text Available The article deals with heroines of William Faulkner's novels Light in August, Absalom, Absalom!, The Sound and the Fury, The Unvanquished, The Town and his short story "A Rose for Emily". The Southern belle features as a recurring character in Faulkner's fiction, her fragility, modesty, weakness yet strength, beauty, sincerity, generous nature, status and her fall from innocence comprise her central characteristics. Confronted with various expectations of Southern society and with the hardships of war, the belle is faced with many obstacles and challenges. Faulkner's heroines face a wide array of problems that prevent them from being and/or remaining a Southern belle. Let us name a few: Lena's inappropriate social status, Joanna's wrong roots, Mrs. Hightower's inability to fulfill her duties as the minister's wife, Ellen's miserable marriage, Judith's sad love life, Rosa's feelings of inferiority and humiliation, Mrs. Compson's failure as a mother, Caddy's weak rebellion against male convention, Drusilla's male characteristics, Linda's unrequited love and Emily's dark secret, to name a few. Through these characters and their destinies Faulkner shows a decaying South whose position has changed considerably over the years. Can the Southern belle save it? Can she save herself?

  3. Southern African species of Mentha L. (Lamiaceae

    Directory of Open Access Journals (Sweden)

    L. E. Codd

    1983-12-01

    Full Text Available The species of Mentha L. occurring in Southern Africa are reviewed and a key is provided to two indigenous and one naturalized species.  M. wissii Launert is reduced to M. longifolia (L. Huds. subsp. wissii (Launert Codd.

  4. Getting southern Sudanese children to school

    Directory of Open Access Journals (Sweden)

    Sibeso Luswata

    2006-07-01

    Full Text Available The Government of Southern Sudan’s Go to School Initiative,supported by UNICEF, which seeks to get 1.6 millionchildren back in school by the end of 2007, incorporateskey elements of the INEE Minimum Standards for Educationin Emergencies, Chronic Crises and Early Reconstruction.

  5. Seismic imaging of Southern African cratons

    DEFF Research Database (Denmark)

    Soliman, Mohammad Youssof Ahmad

    the southern African regions. Some of the main research problems that have been dealt with during this research are about (1) the heterogeneity scale of crustal structure and composition, (2) the depth extent of the cratonic keels and their layering, and (3) the strength of crustal anisotropy. The...

  6. Yellow Fever Outbreak, Southern Sudan, 2003

    OpenAIRE

    Onyango, Clayton O.; Grobbelaar, Antoinette A.; Gibson, Georgina V.F.; Sang, Rosemary C.; Sow, Abdourahmane; Swanepoel, Robert; Burt, Felicity J.

    2004-01-01

    In May 2003, an outbreak of fatal hemorrhagic fever, caused by yellow fever virus, occurred in southern Sudan. Phylogenetic analysis showed that the virus belonged to the East African genotype, which supports the contention that yellow fever is endemic in East Africa with the potential to cause large outbreaks in humans.

  7. Gender, education and peace in southern Sudan

    OpenAIRE

    Jackie Kirk

    2005-01-01

    Expanding access to education for boys and girls is a critical Millennium Development Goal and peace-building challenge. In southern Sudan, as in other post-conflict societies, many girls remain excluded from schooling opportunities which could help develop the knowledge, skills and attitudes to build a peaceful society.

  8. Fostering Technology Absorption in Southern African Enterprises

    OpenAIRE

    World Bank

    2011-01-01

    This book seeks to understand how firms in southern Africa absorb technology and how policy makers can hurry the process along. It identifies channels of technology transfer and absorption through trade and foreign direct investment (FDI) and constraints to greater technology absorption, and it discusses policy options open to the government and the private sector in light of relevant inte...

  9. Enterovirus 75 Encephalitis in Children, Southern India

    OpenAIRE

    Lewthwaite, Penny; Perera, David; Ooi, Mong How; Last, Anna; Kumar, Ravi; Desai, Anita; Begum, Ashia; Ravi, Vasanthapuram; Shankar, M Veera; Tio, Phaik Hooi; Cardosa, Mary Jane; Solomon, Tom

    2010-01-01

    Recent outbreaks of enterovirus in Southeast Asia emphasize difficulties in diagnosis of this infection. To address this issue, we report 5 (4.7%) children infected with enterovirus 75 among 106 children with acute encephalitis syndrome during 2005–2007 in southern India. Throat swab specimens may be useful for diagnosis of enterovirus 75 infection.

  10. Plasmodium falciparum Malaria, Southern Algeria, 2007

    OpenAIRE

    Boubidi, Saïd C.; Gassen, Ibrahim; Khechache, Yacine; Lamali, Karima; Tchicha, Boualem; Brengues, Cécile; Menegon, Michela; Severini, Carlo; Fontenille, Didier; Harrat, Zoubir

    2010-01-01

    An outbreak of Plasmodium falciparum malaria occurred in Tinzaouatine in southern Algeria in 2007. The likely vector, Anopheles gambiae mosquitoes, had not been detected in Algeria. Genes for resistance to chloroquine were detected in the parasite. The outbreak shows the potential for an increase in malaria vectors in Algeria.

  11. Geomorphic Aspects of Southern African Dryland Soils

    Science.gov (United States)

    Eckardt, Frank

    2015-04-01

    Southern African drylands are host to stable land surfaces with limited denudation rates. The resulting soils manifest long term weathering processes, including leaching, collapse and precipitation of calcium carbonate as is the case in the semi-arid Kalahari. Despite the thickness of some of the Kalahari soils and sands, they are furthermore depicting a range of neotectonic land forms and processes, associated with the contemporary rifting of the southern African continent. This is particularly apparent in satellite imagery and digital elevation data that can be used to examine regional scale surface characteristics. Southern Africa is also home to significant global and regional scale dust sources, which are mostly associated with inland basins and playas. Plumes of dust emitted from playas are able to impact upon downwind soil quality. This can be observed in the both the western Makgadikgadi as well as the Central Namib gravel plain. In the Namib playa dust contributes to the accumulation of gravel plain fines, leaching and massive pedogenic gypsum accumulations. It is apparent that Southern African dryland soils are home to aeolian inputs, host extensive duricrusts and depict neotectonic movement which should be of interest to the wider earth science community.

  12. Cadmium isotope variations in the Southern Ocean

    NARCIS (Netherlands)

    Xue, Z.; Rehkämper, M.; Horner, T.J.; Abouchami, W.; Middag, R.; van de Flierd, T.; de Baar, H.J.W.

    2013-01-01

    Cadmium concentrations and isotope compositions were determined for 47 seawater samples from the high nutrient low chlorophyll (HNLC) zone of the Atlantic sector of the Southern Ocean. The samples include 13 surface waters from a transect of the Weddell Gyre and 3 depth profiles from the Weddell Sea

  13. Climate vulnerabilities in the southern plains

    Science.gov (United States)

    The value of agricultural production in the Southern Plains exceeded $59 bil (2012 Agricultural Census) with livestock accounting for 58% of total agricultural sales. Crop and livestock commodities exceeding $1 bil include wheat, corn, horticultural crops, cotton, hay and forages, sorghum, soybean, ...

  14. Marketing University Education: The Southern African Experience.

    Science.gov (United States)

    Maringe, Felix; Foskett, Nick

    2002-01-01

    Examined the perceptions of university marketers in southern Africa. Found a varying awareness of the significance of marketing, with more mature institutions exhibiting more developed marketing orientations. Strategies ranged from marketing as public relations to marketing as sales, with universities in South Africa the only ones demonstrating a…

  15. Living in the shadows: internally displaced people in southern Africa

    Directory of Open Access Journals (Sweden)

    Marion Ryan Sinclair

    1998-04-01

    Full Text Available The Centre for Southern African Studies at the University of the Western Cape has recently begun a research project designed to investigate the extent, conditions and prognoses of internally displaced people (IDPs in southern African countries.

  16. Health Effects of the 2003 Southern California Wildfires on Children

    OpenAIRE

    Künzli, Nino; Avol, Ed; Wu, Jun; Gauderman, W. James; Rappaport, Ed; Millstein, Joshua; Bennion, Jonathan; McConnell, Rob; Gilliland, Frank D.; Berhane, Kiros; Lurmann, Fred; Winer, Arthur; Peters, John M.

    2006-01-01

    Rationale: In late October 2003, Southern California wildfires burned more than 3,000 km2. The wildfires produced heavy smoke that affected several communities participating in the University of Southern California Children's Health Study (CHS).

  17. Techniques and strategies in neurocritical care originating from southern Scandinavia

    DEFF Research Database (Denmark)

    Nordström, Carl-Henrik; Nielsen, Troels Halfeld; Jacobsen, Anne

    2013-01-01

    To describe innovations in neurocritical care originating from university hospitals in southern Scandinavia over a period of 50 years.......To describe innovations in neurocritical care originating from university hospitals in southern Scandinavia over a period of 50 years....

  18. 75 FR 69916 - Southern New Mexico Resource Advisory Committee

    Science.gov (United States)

    2010-11-16

    ... Forest Service Southern New Mexico Resource Advisory Committee AGENCY: Forest Service, USDA. ACTION: Notice of meeting. SUMMARY: The Southern New Mexico Resource Advisory Committee (RAC) will meet in... CODE 3410-11-P...

  19. 76 FR 16603 - Southern New Mexico Resource Advisory Committee

    Science.gov (United States)

    2011-03-24

    ... Forest Service Southern New Mexico Resource Advisory Committee AGENCY: Forest Service, USDA. ACTION: Notice of meeting. SUMMARY: The Southern New Mexico Resource Advisory Committee (RAC) will meet in..., Designated Federal Official. BILLING CODE 3410-11-P...

  20. Zika Could Spread in Southern Europe This Summer

    Science.gov (United States)

    ... page: https://medlineplus.gov/news/fullstory_159369.html Zika Could Spread in Southern Europe This Summer Conditions ... 2016 TUESDAY, June 14, 2016 (HealthDay News) -- The Zika virus could spread in southern Europe this summer ...

  1. Revision of the genus Dombeya (Sterculiaceae in southern Africa

    Directory of Open Access Journals (Sweden)

    I. C. Verdoon

    1986-12-01

    Full Text Available The species of Dombeya Cav. occurring in southern Africa are revised and a key is provided to the eight species present in the region. A new record for southern Africa, D. quinqueseta (Del. Exell, is included.

  2. Saint-Rémy-de-Blot (Puy-de-Dôme : nouvelles observations sur l’évolution architecturale de la forteresse de Château Rocher (xiiie-xxe siècle Saint-Rémy-de-Blot (Puy-de-Dôme: new observations on the architectural development of the fortress of Château Rocher (13th-20th century

    Directory of Open Access Journals (Sweden)

    Mathias Dupuis

    2011-01-01

    Full Text Available Le site de Château Rocher (Saint-Rémy-de-Blot, Puy-de-Dôme, a fait l’objet d’une courte opération archéologique préventive à l’automne 2008, portant sur l’angle nord-est du bâtiment. Les observations sur le bâti et les sondages archéologiques réalisés au cours de cette étude permettent de mieux cerner l’histoire monumentale de la partie nord du château. L’état architectural le plus ancien conservé correspond à un édifice de plan barlong, aux angles arrondis, dont la date de construction pourrait remonter à la fin du xiie ou au tout début du xiiie s. À cette première phase succède une forteresse agrandie, cantonnée de tours circulaires, qui intègre le bâtiment antérieur. Cette seconde campagne architecturale, postérieure à la conquête de l’Auvergne par Philippe Auguste, est difficile à dater précisément, bien que certains indices typo-chronologiques pourraient faire penser à une reconstruction au cours du bas Moyen Âge, peut-être consécutive à la reprise en main du château par Jean II de Chauvigny de Blot, en 1365. Enfin, d’autres réaménagements mineurs interviennent au cours de la période moderne.The site of Château Rocher (Saint-Rémy-de-Blot, Puy-de-Dôme, was the object of a brief rescue excavation in the autumn of 2008, on the north-east corner of the building. Observations on the structure and the archaeological surveys carried out at the heart of this study enable a better determination of the construction history of the castle's north part. The oldest surviving architectural phase involves a building of oblong plan with rounded corners, which could date back to the end of the 12th century or the very beginning of the 13th century. This first phase gives way to an enlarged fortress confined by circular towers, which incorporate the preceding building. This second architectural campaign, later than Philippe Auguste's conquest of the Auverne, is difficult to date precisely, although

  3. Southern Taiwan - an Evolving "Coastal Range"?

    Science.gov (United States)

    Wu, F. T.; McIntosh, K.; Lavier, L. L.

    2008-12-01

    As a part of the TAIGER research, existing tectonic concepts are continuously being reviewed in light of new data and for experimental design. One of the critical areas for understanding the tectonics of Taiwan is southern Taiwan. Seismicity and recent tomographic imaging confirm that the tectonics of Taiwan is controlled by the subduction and collision of two plates: the Philippine Sea plate (PSP) and the Eurasian plate (EUR). In northern and central Taiwan the PSP is in collision with EUR, and at the same time subducts northward under northern Taiwan [Wu et al., 2008]. Before the PSP subducts to sufficient depth, the collision of PSP and EUR produced the Foothills and the Central Range on the EUR and the Coastal Range on the PSP side. For southern Taiwan, with 22.7°N as a rough demarcation, the tectonic interpretation is at variance and still in debate. To the east of southern Taiwan the inactive andesitic volcanic islands of Lutao and Lanhsu mark the top of the Luzon arc, separated from Taiwan by a somewhat deformed fore-arc basin [McIntosh et al., 2005]. To its west the Manila Trench is the western limit of a series of trend-parallel small thrusts on the ocean floor [Lunberg et al., 1997]. As the Trench approaches the continental shelf from the south it gradually loses its bathymetric signature. Southern Taiwan itself is commonly viewed as a part of the accretionary prism, and yet is also considered a continuation of the Central Range, produced by the collision of the Luzon arc and continental shelf. Suppe [1981] and many others had long recognized the central Taiwan orogeny, as a result of the collision of the Luzon Arc with the EUR continental shelf and Central Range, is built from rocks of the continental shelf. Inspection of a map of bathymetry around Taiwan shows that the continental shelf turns noticeably westward offshore of southwestern Taiwan, and that southern Taiwan is situated off the continental shelf. The presence of the Benioff zone under

  4. Sensitivity Analysis of the Forest Vegetation Simulator Southern Variant (FVS-Sn)for Southern Appalachian Hardwoods

    OpenAIRE

    Herring, Nathan Daniel

    2007-01-01

    The FVS-Sn model was developed by the USDA Forest Service to project and report forest growth and yield predictions for the Southern United States. It is able to project forest growth and yield for different forest types and management prescriptions, but it is a relatively new, complex, and untested model. These limitations notwithstanding, FVS-Sn once tested and validated could meet the critical need of a comprehensive growth and yield model for the mixed hardwood forests of the southern A...

  5. The Southern California Twin Register at the University of Southern California: III

    OpenAIRE

    Baker, Laura A.; Tuvblad, Catherine; Wang, Pan; Gomez, Karina; Bezdjian, Serena; Niv, Sharon; Raine, Adrian

    2013-01-01

    The Southern California Twin Register at the University of Southern California (USC) was initiated in 1984 and continues to provide an important resource for studies investigating genetic and environmental influences on human behavior. This article provides an update on the current register and its potential for future twin studies using recruitment through school district databases and voter records. An overview is also provided for an ongoing longitudinal twin study investigating the develo...

  6. 75 FR 2130 - Southern Natural Gas Company; Notice of Application

    Science.gov (United States)

    2010-01-14

    ... Energy Regulatory Commission Southern Natural Gas Company; Notice of Application January 6, 2010. Take notice that on December 29, 2009, Southern Natural Gas Company (Southern), 569 Brookwood Village, Suite... section 7(b) of the Natural Gas Act (NGA) and Part 157 of the Commission's regulations, for an...

  7. Variation in the abundance of southern fish species in the southern North Sea in relation to hydrography and wind

    NARCIS (Netherlands)

    Corten, A.; Kamp, van de G.

    1996-01-01

    Is the increased abundance of southern fish species in the southern North Sea during recent years a signal of a long-term trend, or can it be explained by random variability? Time-series data on the abundance of 12 southern fish species were derived from the 1st quarter International Bottom Trawling

  8. Dot Immunobinding Assay Method with Chlorophyll Removal for the Detection of Southern Rice Black-Streaked Dwarf Virus

    Directory of Open Access Journals (Sweden)

    Linhong Jin

    2012-06-01

    Full Text Available Southern rice black-streaked dwarf virus (SRBSDV, a new virus from Fiji, has seriously damaged rice crops in southern China and northern Vietnam in recent years. This virus is difficult to diagnose in the early stages of infection, and is very destructive at the late stage. In the present study, a dot immunobinding assay (DIBA that has a high sensitivity for diagnosing SRBSDV was developed. Two kinds of treatment for the DIBA were evaluated to determine the most effective one for removing chlorophyll interferences via rice extraction. The first included several reagents to remove chlorophyll, namely, the alkaline reagents like magnesium oxide and alumina oxide, the adsorbent reagents like activated carbon and bentonite, as well as the extraction agent acetone. The second and third treatments, which were used to remove chlorophyll in blot membrane-nitrocellulose and polyvinylidene fluoride (PVDF, included several organic solvents containing methanol, ethanol, acetone, ethyl acetate, and diethyl ether. The results showed that activated carbon and methanol yielded the best contrasting purple color for the infected samples by decreasing the chlorophyll content.

  9. Reemergence of Dengue in Southern Texas, 2013.

    Science.gov (United States)

    Thomas, Dana L; Santiago, Gilberto A; Abeyta, Roman; Hinojosa, Steven; Torres-Velasquez, Brenda; Adam, Jessica K; Evert, Nicole; Caraballo, Elba; Hunsperger, Elizabeth; Muñoz-Jordán, Jorge L; Smith, Brian; Banicki, Alison; Tomashek, Kay M; Gaul, Linda; Sharp, Tyler M

    2016-06-01

    During a dengue epidemic in northern Mexico, enhanced surveillance identified 53 laboratory-positive cases in southern Texas; 26 (49%) patients acquired the infection locally, and 29 (55%) were hospitalized. Of 83 patient specimens that were initially IgM negative according to ELISA performed at a commercial laboratory, 14 (17%) were dengue virus positive by real-time reverse transcription PCR performed at the Centers for Disease Control and Prevention. Dengue virus types 1 and 3 were identified, and molecular phylogenetic analysis demonstrated close identity with viruses that had recently circulated in Mexico and Central America. Of 51 household members of 22 dengue case-patients who participated in household investigations, 6 (12%) had been recently infected with a dengue virus and reported no recent travel, suggesting intrahousehold transmission. One household member reported having a recent illness consistent with dengue. This outbreak reinforces emergence of dengue in southern Texas, particularly when incidence is high in northern Mexico. PMID:27191223

  10. Sharp View of Gullies in Southern Winter

    Science.gov (United States)

    2006-01-01

    20 November 2006 Crisp details in a suite of mid-latitude gullies on a crater wall are captured in this Mars Global Surveyor (MGS) Mars Orbiter Camera (MOC) view obtained in southern winter on 12 October 2006. During southern winter, shadows are more pronounced and the atmosphere is typically quite clear. These gullies, which may have formed in relatively recent martian history by erosion caused by flowing, liquid water, are located in a crater on the east rim of Newton Crater near 40.4oS, 155.3oW. Sunlight illuminates the scene from the upper left. The picture covers an area about 3 km (1.9 mi) wide; the crater rim is on the right side of the image, the crater floor is on the left. North is toward the top/upper left.

  11. Reemergence of Dengue in Southern Texas, 2013

    Science.gov (United States)

    Thomas, Dana L.; Santiago, Gilberto A.; Abeyta, Roman; Hinojosa, Steven; Torres-Velasquez, Brenda; Adam, Jessica K.; Evert, Nicole; Caraballo, Elba; Hunsperger, Elizabeth; Muñoz-Jordán, Jorge L.; Smith, Brian; Banicki, Alison; Tomashek, Kay M.; Gaul, Linda

    2016-01-01

    During a dengue epidemic in northern Mexico, enhanced surveillance identified 53 laboratory-positive cases in southern Texas; 26 (49%) patients acquired the infection locally, and 29 (55%) were hospitalized. Of 83 patient specimens that were initially IgM negative according to ELISA performed at a commercial laboratory, 14 (17%) were dengue virus positive by real-time reverse transcription PCR performed at the Centers for Disease Control and Prevention. Dengue virus types 1 and 3 were identified, and molecular phylogenetic analysis demonstrated close identity with viruses that had recently circulated in Mexico and Central America. Of 51 household members of 22 dengue case-patients who participated in household investigations, 6 (12%) had been recently infected with a dengue virus and reported no recent travel, suggesting intrahousehold transmission. One household member reported having a recent illness consistent with dengue. This outbreak reinforces emergence of dengue in southern Texas, particularly when incidence is high in northern Mexico. PMID:27191223

  12. Cassini observations of Saturn's southern polar cusp

    CERN Document Server

    Arridge, C S; Achilleos, N; Bogdanova, Y V; Bunce, E J; Cowley, S W H; Fazakerley, A N; Khurana, K K; Lamy, L; Leisner, J S; Roussos, E; Russell, C T; Zarka, P; Coates, A J; Dougherty, M K; Jones, G H; Krimigis, S M; Krupp, N

    2016-01-01

    The magnetospheric cusps are important sites of the coupling of a magnetosphere with the solar wind. The combination of both ground- and space-based observations at Earth have enabled considerable progress to be made in understanding the terrestrial cusp and its role in the coupling of the magnetosphere to the solar wind via the polar magnetosphere. Voyager 2 fully explored Neptune's cusp in 1989 but highly inclined orbits of the Cassini spacecraft at Saturn present the most recent opportunity to repeatedly studying the polar magnetosphere of a rapidly rotating planet. In this paper we discuss observations made by Cassini during two passes through Saturn's southern polar magnetosphere. Our main findings are that i) Cassini directly encounters the southern polar cusp with evidence for the entry of magnetosheath plasma into the cusp via magnetopause reconnection, ii) magnetopause reconnection and entry of plasma into the cusp can occur over a range of solar wind conditions, and iii) double cusp morphologies are...

  13. Hartung's Astronomical Objects for Southern Telescopes

    Science.gov (United States)

    Malin, David; Frew, David J.

    1995-10-01

    Many of the most spectacular astronomical objects are found in the southern skies. With this up-to-date, superbly illustrated handbook, both the amateur with binoculars and the expert with a telescope can make discoveries about new and interesting objects. Professor E. J. Hartung first produced his comprehensive and highly respected guide in 1968. Now the book has been greatly expanded and thoroughly revised, enhancing its character as an indispensable information source. With over 150 illustrations, new material is included on constellations and celestial coordinate systems as well as more modern descriptions of stars, nebulae and galaxies. The authors have included a new "southern Messier" list of objects. The authors' passion for their subject make this a unique and inspirational book. Many of the beautiful photographs were taken by David Malin, the world's leading astronomical photographer. The result will fascinate active and armchair astronomers alike.

  14. Nuclear medicine development in the southern urals

    International Nuclear Information System (INIS)

    The last 25 years results of organization work at Nuclear Medicine cluster in the Southern Urals are presented. The main purpose of the project was - to create one of the largest Russian platforms for the development and application of nuclear technology. A successive branched system of radiopharmaceutical production and radiopharmaceuticals consumers effectively operate in the region, and is provided by prepared staff and is able to provide high-tech care for cancer patients using nuclear program in the field of health care

  15. Gulf of Antalya, Southern Turkish Coastline

    Science.gov (United States)

    1984-01-01

    The historic and strategic southern Turkish coastline and Gulf of Antalya (37.0N, 31.0E) has, since ancient times, served as the classic land and sea invasion routes to the riches of the Near East as Persian, Greek, Roman and later European Crusader armies traveled the familiar routes of conquest. Even in modern times, this area is still the seat of political and military unrest as diverse cultural groups still strive for regional control.

  16. The Dynamics of Conflict in Southern Thailand

    OpenAIRE

    Engvall, Anders; Andersson, Magnus

    2014-01-01

    The prolonged insurgency in Southern Thailand has claimed thousands of victims since the outbreak of major violence in 2004. Drawing on a unique data-set covering all violent incidents since 2004, a hot spot analysis shows that the bulk of the violence is concentrated in clusters of sub-districts forming hotbeds of conflict. Drivers of conflict are identified through a comparative analysis of the hotspots of violence with less violent areas. The analysis shows that identity manifested in lang...

  17. Range Beef Cattle Productivity in Southern Utah

    OpenAIRE

    Maiga, Mouslim A.

    1984-01-01

    Twenty-six range beef cattle ranches in southern Utah were surveyed by personal interview to obtain production data. The data were used to characterize the level of production efficiency in terms of calving rate, weaning rate, weaning weight, and net weaning weight in these operations; and to identify factors associated with differences in productivity. The data revealed that productive efficiency was generally lower than the potential. Mean calving rate of cows exposed for breeding was...

  18. The normal choroidal thickness in southern Thailand

    OpenAIRE

    Jirarattanasopa P; Panon N; Hiranyachattada S; Bhurayanontachai P

    2014-01-01

    Pichai Jirarattanasopa,1 Nisa Panon,2 Siriphun Hiranyachattada,2 Patama Bhurayanontachai1 1Department of Ophthalmology, Faculty of Medicine, 2Department of Physiology, Faculty of Science, Prince of Songkla University, Hat Yai, Thailand Objective: To investigate the association between subfoveal choroidal thickness in healthy southern Thailand volunteers and age, axial length, and refractive error.Subjects and methods: This was a prospective cross-sectional case series. A total of 210&n...

  19. The normal choroidal thickness in southern Thailand

    OpenAIRE

    Jirarattanasopa, Pichai

    2014-01-01

    Pichai Jirarattanasopa,1 Nisa Panon,2 Siriphun Hiranyachattada,2 Patama Bhurayanontachai1 1Department of Ophthalmology, Faculty of Medicine, 2Department of Physiology, Faculty of Science, Prince of Songkla University, Hat Yai, Thailand Objective: To investigate the association between subfoveal choroidal thickness in healthy southern Thailand volunteers and age, axial length, and refractive error.Subjects and methods: This was a prospective cross-sectional case series. A total of 2...

  20. Southern Pine Based on Biorefinery Center

    Energy Technology Data Exchange (ETDEWEB)

    Ragauskas, Arthur J; Singh, Preet

    2014-01-10

    This program seeks to develop an integrated southern pine wood to biofuels/biomaterials processing facility on the Recipient’s campus, that will test advanced integrated wood processing technologies at the laboratory scale, including: • The generation of the bioethanol from pines residues and hemicelluloses extracted from pine woodchips; • The conversion of extracted woodchips to linerboard and bleach grade pulps; and • The efficient conversion of pine residues, bark and kraft cooking liquor into a useful pyrolysis oil.

  1. An ecological bibliography for southern Africa

    Directory of Open Access Journals (Sweden)

    A. J. Engelbrecht

    1983-12-01

    Full Text Available An ecological bibliography for southern Africa up until 1975 is currently being compiled. References recorded by researchers at the Botanical Research Institute, Pretoria are being expanded and incorporated into a computer data base. All references are annotated with codes, key words, biomes and regions where applicable. The IBM/STAIRS programme package is used for retrieving references by means of authors and subject headings as well as sorting alphabetically.

  2. Beta-Thalassaemia types in southern Sardinia.

    OpenAIRE

    Cao, A; Furbetta, M; Ximenes, A; Angius, A; Rosatelli, C; Tuveri, T; Scalas, M T; Falchi, A M; Maccioni, L; Melis, M A; R. Galanello

    1981-01-01

    In this study the prevalence of the different beta-thalassaemia types in southern Sardinia was investigated by cellulose acetate and agar gel electrophoresis or globin chain synthesis analysis on column chromatography or both in (1) all the patients (347) presenting with thalassaemia major or intermedia at our haematology service from 1976 to 1979, and (2) a group of 82 patients with transfusion-dependent thalassaemia major randomly chosen from 236 under our care. Apart from six subjects with...

  3. Vertical Eddy Fluxes in the Southern Ocean

    OpenAIRE

    Zika, Jan D.; Le Sommer, Julien; Dufour, Carolina O.; Molines, Jean-Marc; Barnier, Bernard; Brasseur, Pierre; Dussin, Raphaël; Penduff, Thierry; Iudicone, Daniele; Lenton, Andrew; Madec, Gurvan; Mathiot, Pierre; Orr, James; Shuckburgh, Emily; Vivier, Frederic

    2013-01-01

    The overturning circulation of the Southern Ocean has been investigated using eddying coupled ocean–sea ice models. The circulation is diagnosed in both density–latitude coordinates and in depth–density coordinates. Depth–density coordinates follow streamlines where the Antarctic Circumpolar Current is equivalent barotropic, capture the descent of Antarctic Bottom Water, follow density outcrops at the surface, and can be interpreted energetically. In density–latitude coordinates, wind-driven ...

  4. Cryptococcus gattii in AIDS Patients, Southern California

    OpenAIRE

    Chaturvedi, Sudha; Dyavaiah, Madhu; Larsen, Robert A.; Chaturvedi, Vishnu

    2005-01-01

    Cryptococcus isolates from AIDS patients in southern California were characterized by molecular analyses. Pheromone MFα1 and MF a 1 gene fragments were polymerase chain reaction–amplified with fluorescently labeled primers and analyzed by capillary electrophoresis (CE) on DNA analyzer. CE–fragment-length analyses (CE-FLAs) and CE–single-strand conformation polymorphisms (CE-SSCPs) were used to determine Cryptococcus gattii (Cg), C. neoformans (Cn) varieties neoformans (CnVN) and grubii (CnVG)...

  5. Leptospira infection among pigs in southern Vietnam

    OpenAIRE

    Boqvist, Sofia

    2002-01-01

    Leptospirosis is a bacterial disease that in pigs primarily causes reproductive disturbances. The disease is a zoonosis, i.e. it can be transmitted between animals and humans. Leptospirosis is spread worldwide, although it is of most importance in tropical regions where animal management and climate favour transmission and survival of the bacteria in the environment, such as the tropical Mekong delta (MD) in southern Vietnam. In the MD, reproduction disturbances in pigs due to infectious agen...

  6. Seismic hazard in Andalucia region (Southern Spain)

    OpenAIRE

    Benito Oterino, Belen; Navarro Bernal, Manuel; Gaspar Escribano, Jorge M.; Vidal Sánchez, Francisco; Góngora, Ana; García Rodríguez, María José; Martínez Solares, José Manuel

    2008-01-01

    The global objective of the SISMOSAN Project has been to provide a general seismic risk assessment of Andalusian region (Southern Spain) associated with the ground motions expected for a return period of 475 years. The project was financed by Civil Defence of Andalusia and its results will be applied to the definition of regional emergency plans. We present here the study and main results of the first phase of the project, aimed at evaluating seismic hazard. In contrast to most of the previou...

  7. Star Formation in Southern Seyfert Galaxies

    OpenAIRE

    Forbes, Duncan; Norris, Ray

    1998-01-01

    We have produced radio maps, using the ATCA, of the central regions of six southern Seyfert 2 galaxies (NGC 1365, 4945, 6221, 6810, 7582, and Circinus) with circumnuclear star formation, to estimate the relative contribution of star formation activity compared to activity from the active galactic nucleus (AGN). The radio morphologies range from extended diffuse structures to compact nuclear emission, with no evidence, even in the relatively compact sources, for synchrotron self--absorption. I...

  8. Regional investments in Southern European cities

    OpenAIRE

    Metaxas, Theodore

    2011-01-01

    The article examines the capacity of four medium-sized cities in Southern Europe, concerning the current situation of their assets (agglomeration economies, urban infrastructures, factors of labor and cost, etc.), the degree of development policies implementation and effectiveness by local authorities and finally the level of local authorities capacity to plan and implement particular policies and partnerships with the private sector in order to shape a favorable and attractive magnitude inve...

  9. Competitive destination analysis in Southern European countries

    OpenAIRE

    Águas, Paulo; Veiga, Célia; Reis, Helena

    2010-01-01

    Purpose – The purpose of this paper is to analyse the competitiveness of the European Union Member States of Southern Europe (France, Greece, Italy, Portugal and Spain) as tourist destinations for European Union Member States of Central and Northern Europe (Austria, Belgium, Denmark, Finland, Germany, The Netherlands, Ireland, Sweden and the UK). Design/methodology/approach – Application of the market share analysis tool, initially developed by Faulkner, using secondary data from Eurosta...

  10. Entrepreneurship and Income Inequality in Southern Ethiopia

    OpenAIRE

    Kimhi, Ayal

    2009-01-01

    This paper uses inequality decomposition techniques in order to analyse the consequences of entrepreneurial activities to household income inequality in southern Ethiopia. A uniform increase in entrepreneurial income reduces per capita household income inequality. This implies that encouraging rural entrepreneurship may be favourable for both income growth and income distribution. Such policies could be particularly successful if directed at the low-income, low-wealth, and relatively uneducat...

  11. Competitive Dynamics of Southern California's Clothing Industry

    OpenAIRE

    Allen J. Scott

    2005-01-01

    A general outline of the functional and spatial characteristics of the clothing industry in Southern California is sketched out. Two important trends are noted: (a) the increasing design- and knowledge-intensive structure of the industry and (b) the marked increase in offshore subcontracting by local manufacturers that has occurred in recent years. The predicaments and promises of this situation are explored. Will the industry simply continue to lose its employment base in the region? Will it...

  12. Southern California: The Detroit of Electric Cars?

    OpenAIRE

    Allen J. Scott

    1993-01-01

    The California economy is in the doldrums, especially in the Los Angeles region, owing in large part to the decline of aerospace-defense industries. The region also suffers from the nation's worst pollution problem, owing largely to its dependence on automobiles. So, we're led to ask whether these linked perils might be converted into a combined opportunity. We ask whether we might blunt both the environmental and the employment problems by building a new electric-vehicle industry in Southern...

  13. Industrial Physics---Southern California Style

    Science.gov (United States)

    Leslie, Stuart

    2013-03-01

    Only in Southern California did space-age style really come into its own as a unique expression of Cold War scientific culture. The corporate campuses of General Atomic in San Diego and North American Aviation in Los Angeles perfectly expressed the exhilarating spirit of Southern California's aerospace era, scaling up the residential version of California modernism to industrial proportion. Architects William Pereira and A.C. Martin Jr., in collaboration with their scientific counterparts, fashioned military-industrial `dream factories' for industrial physics that embodied the secret side of the space-age zeitgeist, one the public could only glimpse of in photographs, advertisements, and carefully staged open houses. These laboratories served up archetypes of the California dream for a select audience of scientists, engineers, and military officers, live-action commercials for a lifestyle intended to lure the best and brightest to Southern California. Paradoxically, they hid in plain sight, in the midst of aerospace suburbs, an open secret, at once visible and opaque, the public face of an otherwise invisible empire. Now, at the end of the aerospace era, these places have become an endangered species, difficult to repurpose, on valuable if sometimes highly polluted land. Yet they offer an important reminder of a more confident time when many physicists set their sights on the stars.

  14. Towards Marine Spatial Planning in Southern Taiwan

    Directory of Open Access Journals (Sweden)

    Meng-Tsung Lee

    2014-11-01

    Full Text Available Due to population growth, rapid economic development and inadequate marine control, the use of ocean and coastal regions in Taiwan has become more frequent and intense in recent years. However, the lack of comprehensive marine and coastal planning in this island nation has led to many conflicts over space and resources and limited its ability to prepare for and respond to environmental hazards, thus threatening national security as well as the safety and property of its citizens. This study proposes a marine zoning scheme for southern Taiwan. The results show that many important habitats in the southern sea areas have not been properly protected due to the extremely small size of the marine protected area. Furthermore, the majority of the conflicts derive from the exclusive fishing right vs. other uses such as marine conservation. Therefore, it is crucial to establish the marine spatial planning (MSP for the Southern Taiwan to deal with the conflicts of use seas and uncertainties associated with complex, heterogeneous, and dynamic marine system.

  15. Propagation characteristics of thunderstorms in southern Germany

    Energy Technology Data Exchange (ETDEWEB)

    Hagen, M.; Bartenschlager, B.; Finke, U.

    1998-05-01

    The propagation of thunderstorms in southern Germany was investigated. The thunderstorms were observed by a lightning position system during the summer months of the years 1992 to 1996. On average every second day thunderstorms were observed anywhere in southern Germany. In general thunderstorms approach from westerly and south-westerly directions. The average speed is 13 m/s. No significant relation between the occurrence of thunderstorms and the large scale synoptic pattern described by the Grosswetterlagen (large scale weather pattern) was found. Thunderstorms were observed during almost all Grosswetterlagen. The reduction to 8 weather pattern based on the low-level flow in southern Germany showed that thunderstorms are likely when the flow has westerly directions (43%) or easterly directions (20%). Three distinct groups of different lightning patterns could be identified; stationary, moving thunderstorms and thunderstorm lines. The convective available potential energy (CAPE) and the wind shear were retrieved from the radio soundings from Muenchen and Stuttgart. On average CAPE was 583 J/kg for stationary, 701 J/kg for moving thunderstorms, and 876 J/kg for thunderstorm lines. The average bulk Richardson numbers are 152, 80 and 52 for stationary, moving thunderstorms and thunderstorm lines, respectively. The steering level was found to be at about 3 and 6 km m.s.l. However, it should be noted, that in most cases the soundings do not completely describe the local environment of thunderstorms, since radio soundings are only available twice a day. (orig.)

  16. [The new migratory deal in Southern Europe].

    Science.gov (United States)

    Simon, G

    1986-09-01

    The author examines migration patterns in Southern Europe during the 1970s and early 1980s, noting particularly the reduction in migration northward from this region. It is noted that "departure potential remains sizable in certain areas of Portugal, Spain, Southern Italy, and most particularly, of Turkey and Yugoslavia. Transoceanic migrations have by no means ceased, as new flows of skilled labor have, since 1974, gone towards Arab states endowed with petrol (oil) revenues. And yet, the paramount fact is most surely the emergence and the proliferation in Greece, Spain, and (especially) in Italy, of basically clandestine (illegal) immigration. This movement is due to the convergence of several factors: economic and demographic disparities between northern and southern shores of the Mediterranean Sea, the sealing-off of borders in Northwestern Europe and the 'carry-over' effect upon nations of 'transit', the extent of the flow of refugees, and--most particularly--the appeal provided by the development, in these new employer countries, of an underground economy accompanied by the extension into industry of the practice of 'undeclared' work. And notwithstanding the series of rules lastly drawn up in Spain and in Greece, such forms of clandestine (unauthorized) migration appear highly likely--to say the least--to persist." (SUMMARY IN ENG AND SPA) PMID:12268205

  17. Climate change and wildfire around southern Africa

    Science.gov (United States)

    Kimura, K.

    2013-12-01

    When the climate change in southern Africa is analyzed, the effects of rainfall by Inter Tropical Convergence Zone(ITCZ) and cyclone are important. In this study, the rainfall patterns are analyzed with synoptic analysis. The southern limit of ITCZ is around the arid zone around Namibia, Botswana, Zimbabwe and Mozambique. This zone has some effects of both ITCZ and extratropical cyclones by season. As well as this, the eastern part of this area has heavy rainfall by the cyclone from the Indian Ocean once in several years. In the other hand, a lot of wildfire occurs in this area. The main cause of the wildfire is anthropogenic misbehavior of the fire by the slash-and-burn agriculture. Recently we can find the wildfire detected with the satellite imagery like Terra/Aqua MODIS. We can compare the weather environment and the wildfire occurrence with Geographical Information System. We have tried making the fire weather index suitable for the southern African semi-arid area.

  18. Changes in rRNA levels during stress invalidates results from mRNA blotting: Fluorescence in situ rRNA hybridization permits renormalization for estimation of cellular mRNA levels

    DEFF Research Database (Denmark)

    Hansen, M.C.; Nielsen, A.K.; Molin, Søren; Hammer, Karin; Kilstrup, Mogens

    2001-01-01

    experiments, in which mRNA levels routinely are normalized to a fixed amount of extracted total RNA. The cellular levels of specific mRNA species were estimated using a renormalization with the total RNA content per cell. By a combination of fluorescence in situ rRNA hybridization, which estimates the...... relative level of rRNA per cell, and slot blotting to rRNA probes, which estimates the level of rRNA per extracted total RNA, the amount of RNA per cell was calculated in a series of heat shock experiments with the gram-positive bacterium Lactococcus lactis. It was found that the level of rRNA per cell......Regulation of gene expression can be analyzed by a number of different techniques. Some techniques monitor the level of specific mRNA directly, and others monitor indirectly by determining the level of enzymes encoded by the mRNA. Each method has its own inherent way of normalization. When results...

  19. Conventional serological performance in diagnosis of Chagas' disease in southern Brazil

    Directory of Open Access Journals (Sweden)

    Anelise Bergmann Araújo

    2013-04-01

    Full Text Available Results of Chagas' disease diagnosis show disagreement. The aim of this study was to compare commercial tests for Chagas' disease serodiagnosis in southern Brazil. A total of 161 samples were evaluated. Three enzyme-linked immunosorbent assays, one indirect hemagglutination and one indirect immunofluorescence were assessed. Trypomastigote excreted-secreted antigen-blot was a confirmatory method. From 161 samples, 65.84% were positive in all tests, while 34.16% presents mismatch result in at least one of the tests. All techniques tested presented false-positive and/or false-negative results as follows: Enzyme-linked immunosorbent assay 1 had more false-positive results (lower specificity, indirect immunofluorescence had the highest rate of false-negative results (lower sen sitivity, enzyme-linked immunosorbent assays had fewer false-negative results (higher sensitivity, while indirect hemagglutination showed no false-positive result (higher specificity. Knowing the characteristics of techniques make it possible to combine them and obtain more reliable diagnosis. Therefore, it seems useful to combine techniques for diagnosing this infection.

  20. Probabilistic Drought Forecasting in Southern Taiwan Using El Niño-Southern Oscillation Index

    Directory of Open Access Journals (Sweden)

    Shien-Tsung Chen

    2013-01-01

    Full Text Available This study proposes a probabilistic drought forecasting model to forecast meteorological drought in Southern Taiwan using the El Niño-SouthernNiño-Southern Oscillation (ENSO index. Meteorological drought is defined by the standardized precipitation index (SPI, and the ENSO index is El NiñoNiño sea surface temperature (SST. Two probabilistic forecasting model architectures were constructed based on the transition probabilities from El NiñoNiño SSTs to SPIs. Both model architectures forecast a one-month-ahead probability distribution for meteorological drought using different combinations of El NiñoNiño SST variables. Forecasting results showed the robustness of the probabilistic drought forecasting models. In addition, this study discussed the selection of El NiñoNiño SST variables used in the probabilistic drought forecasting model, and found that models with a single SST input outperformed those with multiple SST inputs.

  1. The Use of Biotin to Demonstrate Immunohistochemistry, Western Blotting, and Dot Blots in University Practical Classes

    Science.gov (United States)

    Millar, Thomas James; Knighton, Ronald; Chuck, Jo-Anne

    2012-01-01

    Immunological detection of proteins is an essential method to demonstrate to undergraduate biology students, however, is often difficult in resource and time poor student laboratory sessions. This method describes a failsafe method to rapidly and economically demonstrate this technique using biotinylated proteins or biotin itself as targets for…

  2. Screening for simian foamy virus infection by using a combined antigen Western blot assay: evidence for a wide distribution among Old World primates and identification of four new divergent viruses

    International Nuclear Information System (INIS)

    Simian foamy viruses (SFVs) belong to a genetically and antigenically diverse class of retroviruses that naturally infect a wide range of nonhuman primates (NHPs) and can also be transmitted to humans occupationally exposed to NHPs. Current serologic detection of SFV infection requires separate Western blot (WB) testing by using two different SFV antigens [SFVAGM (African green monkey) and SFVCPZ (chimpanzee)]. However, this method is labor intensive and validation is limited to only small numbers of NHPs. To facilitate serologic SFV testing, we developed a WB assay that combines antigens from both SFVAGM and SFVCPZ. The combined-antigen WB (CA-WB) assay was validated with 145 serum samples from 129 NHPs (32 African and Asian species) and 16 humans, all with known SFV infection status determined by PCR. Concordant CA-WB results were obtained for all 145 PCR-positive or -negative primate and human specimens, giving the assay a 100% sensitivity and specificity. In addition, no reactivity was observed in sera from persons positive for human immunodeficiency virus or human T cell lymphotropic virus (HIV/HTLV) (n = 25) or HIV/HTLV-negative U.S. blood donors (n = 100). Using the CA-WB assay, we screened 360 sera from 43 Old World primate species and found an SFV prevalence of about 68% in both African and Asian primates. We also isolated SFV from the blood of four seropositive primates (Allenopithecus nigroviridis, Trachypithecus francoisi, Hylobates pileatus, and H. leucogenys) not previously known to be infected with SFV. Phylogenetic analysis of integrase sequences from these isolates confirmed that all four SFVs represent new, distinct, and highly divergent lineages. These results demonstrate the ability of the CA-WB assay to detect infection in a large number of NHP species, including previously uncharacterized infections with divergent SFVs

  3. A comparison of real-time PCR and reverse line blot hybridization in detecting feline haemoplasmas of domestic cats and an analysis of risk factors associated with haemoplasma infections

    Directory of Open Access Journals (Sweden)

    Georges Karla

    2012-07-01

    Full Text Available Abstract Background Three species of feline haemoplasma are recognised: Mycoplasma haemofelis (Mhf, ‘Candidatus Mycoplasma haemominutum’ (CMhm and ‘Candidatus Mycoplasma turicensis (CMt. This study compared a reverse line blot hybridization (RLB assay for simultaneous detection of Mhf, CMhm with three separate quantitative real-time polymerase chain reaction (qPCR assays used for diagnosis of Mhf, CMhm and CMt. The RLB and qPCR assays were applied to DNA extracted from blood samples collected from 154 cats from Trinidad and Tobago. Results CMhm and Mhf DNA were detected using both RLB and qPCR. CMt DNA was detected by qPCR only. Comparing RLB and qPCR for the detection of CMhm DNA, 40 (26.3% and 48 (31.6% cats, respectively, were positive. The difference was more marked for Mhf, with RLB detecting a total of only 11 (7.2% positive cats whereas qPCR detected 41 (27.0% positive cats. Using qPCR as a gold standard, haemoplasma infected cats were more likely to be retrovirus positive (OR = 5.68, P = 0.02 and older (median age 5.5 years, than non-infected cats. In addition, CMhm positive cats were more likely to be male (OR = 3.4, P = 0.04. Conclusions Overall the qPCR was more sensitive than RLB. In addition, age (median 5.5 years and retrovirus positivity were risk factors for infection with the feline haemoplasmas in this study population. Further studies on feline haemoplasma infections in cats are needed to determine the significance of detecting small amounts of haemoplasma DNA, feline retrovirus infection and other associated risk factors on the clinical manifestation of disease.

  4. Eddies in the southern Mozambique Channel

    Science.gov (United States)

    Quartly, G. D.; Srokosz, M. A.

    2004-01-01

    The Agulhas Current system contains one of the world's strongest western boundary currents, and plays an important part in the warm water path of the global thermohaline circulation. However, there have been few surveys of the source regions of the Agulhas Current, and thus little in situ measurement of their variability. Utilizing the more than 5-year record of SeaWiFS data, we examine the eddy activity present in the southern portion of the Mozambique Channel. The two sources of Agulhas input from the central Indian Ocean (southward flow through the Mozambique Channel and westward flow around the southern limit of Madagascar) both show great temporal variability, with no clear seasonal signal. A number of large (˜200 km diameter) anticyclonic rings intermittently propagate poleward along the western edge of the channel, sweeping coastal waters into mid-channel. Their passage past Maputo appears to affect the circulation of the lee eddy in the Delagoa Bight. The eastern side of the channel is mainly characterized by cyclonic eddies. These are made manifest in the lee of the southern tip of Madagascar, although it is not clear whether many form there or just develop a visible presence due to entrainment of high-chlorophyll coastal waters. Several of these cyclonic eddies then appear to move in west-southwesterly direction. The chlorophyll data do reveal the apparent East Madagascar Retroflection on occasions, but do not show clear examples of the pinching off of anticyclonic eddies. However, surface waters from the East Madagascar Current may reach the African mainland on occasions when no retroflection is present.

  5. The Future of Southern Ocean Observing Systems

    Science.gov (United States)

    Talley, L. D.

    2015-12-01

    Knowledge of the Southern Ocean's role in global climate from seasonal to millennial timescales is evolving, with rapidly increasing recognition of the centrality of the Southern Ocean to Earth's heat, carbon, nutrient, and freshwater budgets, and of the impact of interactions between the ocean and the major ice shelves and grounded ice sheets of Antarctica, which have been decreasing in mass. Observations in this data-sparse and logistically remote region have never been so important, and many nations are rising to the challenge of supporting both experiments and long-term sustained observations. As illustrated in the figure from Meredith et al. (Current Op. Env. Sustain. 2013), autonomous in situ technologies are at the fore because of the difficulty and expense of sending ships year-round and because the crucial satellite remote sensing must be accompanied by in situ observations, including beneath sea ice and ice shelves. The Southern Ocean Observing System (SOOS) has grown out of this recognized need for coordinated observations from the Antarctic coastline northward to the subtropics, from the bottom water production regions in coastal polynyas over the continental shelves, to the regions of interaction of warm ocean waters with Antarctic ice shelves, beneath the vast seasonal sea ice region, and in the hot spots of air-sea fluxes and cross-Antarctic Circumpolar Current (ACC) mixing where the ACC interacts with topography and continental boundaries. The future includes international coordination and collaboration and strengthening of new and existing technologies, which include satellite observing, ice-enabled profiling floats, profiling from marine mammals, moored measurements in many strategic locations, glider and other autonomous operations in all regions, and drilling through floating ice shelves to measure the ocean waters below. Improved and consistent weather observations around the Antarctic coastlines will improve forecasting and reanalysis. Ice

  6. H2 fuelling infrastructure in Southern California

    International Nuclear Information System (INIS)

    'Full text:' The South Coast Air Quality Management District (SCAQMD) is the local air agency covering the majority of southern California, and the entity legislatively responsible for bringing the region into compliance with the federal Clean Air standards by 2010. One of the tools used by the SCAQMD to accelerate achieving cleaner air is the funding of research, development, and demonstration projects for advanced, clean air technologies. One major focus has been on hydrogen and fuel cells for both stationary and mobile applications. The presentation will discuss the SCAQMD strategy and deployment efforts regarding the development and expansion of hydrogen fueling infrastructure in the South Coast Air Basin. (author)

  7. Dissolved aluminium in the Southern Ocean

    OpenAIRE

    Middag, R.; Slooten van, C.; Baar, H.J.W. de; Laan, P.

    2011-01-01

    Dissolved aluminium (Al) occurs in a wide range of concentrations in the world oceans. The concentrations of Al in the Southern Ocean are among the lowest ever observed. An all-titanium CTD sampling system makes it possible to study complete deep ocean sections of Al and other trace elements with the same high vertical resolution of 24 depths as normal for traditional CTD/Rosette sampling. Overall, 470 new data points of Al are reported for 22 full depth stations and 24 surface sampling posit...

  8. Airlift Recirculation Well Final Report - Southern Sector

    International Nuclear Information System (INIS)

    Chlorinated solvents used in the A/M-Area at the Savannah River Site (SRS) from 1952-1982 have contaminated the groundwater under the site. To comply with the requirements of the current SCDHEC Part B Permit, this plume is being addressed by a multi-phase program under the direction of the Environmental Restoration Division at SRS. This report details the first phase of this program, the containment of the portion of the plume greater than 500 ppb (TCE) within the Southern Sector of the A/M Area

  9. Epidemiology of cerebral palsy in Southern Denmark

    DEFF Research Database (Denmark)

    Frøslev-Friis, Christina; Dunkhase-Heinl, Ulrike; Andersen, Johnny Dohn Holmgren;

    2015-01-01

    INTRODUCTION: The aim of this study was to describe the prevalence, subtypes, severity and neuroimaging findings of cerebral palsy (CP) in a cohort of children born in Southern Denmark. Risk factors were analysed and aetiology considered. METHODS: A population-based cohort study covering 17....... Primary prevention of CP is possible if the numbers of preterm births and multiple pregnancies can be reduced. FUNDING: The Danish Cerebral Palsy Follow-up Programme is supported by the foundation "Ludvig og Sara Elsass Fond". TRIAL REGISTRATION: 2008-58-0034....

  10. Parasites of cottontail rabbits of southern Illinois.

    Science.gov (United States)

    Lepitzki, D A; Woolf, A; Bunn, B M

    1992-12-01

    Fifteen species of parasites including Haemaphysalis leporispalustris, Ixodes dentatus, Amblyomma americanum, Cediopsylla simplex, Odontopsyllus multispinosus, Cuterebra sp., Obeliscoides cuniculi, Trichostrongylus calcaratus, Trichostrongylus affinis, Longistriata noviberiae, Dermatoxys veligera, Trichuris sp., Mosgovoyia sp., Taenia pisiformis, and Hasstilesia tricolor as well as coccidia oocysts were collected from 96 cottontail rabbits (Sylvilagus floridanus) confined to a pen in southern Illinois in 1983 and 1984. The diversity of parasites and the intensities of infections were similar to published reports on free-ranging populations. Most variations in parasite abundances were attributable to season. Few lesions were seen in association with parasitism. PMID:1491303

  11. The Herpetology of the Southern Kalahari domain

    Directory of Open Access Journals (Sweden)

    W. D Haacke

    1984-12-01

    Full Text Available The herpetofauna of the southern Kalahari has mixed affinities, as this area lies on a rainfall gradient in a critical area where a transition between the arid south-west and the moister north-east takes place. As the variation in substrate type is relatively limited, the effect of the rainfall gradient appears to influence and determine the range limits of many taxa in both directions, resulting in an area in which of 55 recorded reptiles, 11 western taxa overlap or form a parapatric zone with 25 eastern taxa, while the remaining taxa are endemic or wideranging.

  12. Dryland orchard development in southern Tamil Nadu

    International Nuclear Information System (INIS)

    With low annual rainfall and high potential of evaporation in southern districts of Tamil Nadu, it is difficult to grow the crops, successfully. Drylands of this tract are vulnerable to high radiation, high temperature and variable rainfall. Hence, dryfarming has become a risky enterprise in this zone and all the above factors altogether reduce the choice of agricultural crops. Considering the magnitude of the area and it's untapped potential, which offers enormous scope for dryland horticulture in this region and thereby improving the soil productivity for other crops too

  13. Eddies in the southern Mozambique Channel

    OpenAIRE

    Quartly, G.D.; Srokosz, M.A.

    2004-01-01

    The Agulhas Current system contains one of the world's strongest western boundary currents, and plays an important part in the warm water path of the global thermohaline circulation. However, there have been few surveys of the source regions of the Agulhas Current, and thus little in situ measurement of their variability. Utilizing the more than 5-year record of SeaWiFS data, we examine the eddy activity present in the southern portion of the Mozambique Channel. The two sources of Agulhas inp...

  14. The Southern Ocean and South Pacific Region

    OpenAIRE

    Kelleher, K.; Warnau, Michel; Failler, Pierre; Pecl, Gretta; Turley, Carol; Boeuf, Gilles; Laffoley, Dan; Parker, Laura; Gurney, Leigh

    2012-01-01

    The Region comprises three sub-regions (FAO Statistical Areas) with very different characteristics. The South Pacific includes the vast and virtually unpopulated Southern Ocean surrounding the Antarctic. It has the world’s largest fisheries off Peru and Chile and some of the world’s best managed fisheries in Australia and New Zealand. The Region has over 27% of the world’s ocean area and over 98% of the Region’s total area of 91 million km2 is ‘open ocean’. The Region contains less than 5% of...

  15. Ethnobotanical remarks on Central and Southern Italy

    Directory of Open Access Journals (Sweden)

    Lucia Leporatti

    2007-05-01

    Full Text Available Abstract Background The present paper is a brief survey on the ethnobotanical works published by the Authors since 1981, concerning the research carried out in some southern and central Italian regions. Before Roman domination these territories were first inhabited by local people, while the southern areas were colonized by the Greeks. These different cultural contributions left certain traces, both in the toponyms and in the vernacular names of the plants and, more generally, in the culture as a whole. Methods Field data were collected through open interviews, mainly of farmers, shepherds and elderly people, born or living in these areas for a long time. Voucher specimens of collected plants are preserved in the respective herbaria of the Authors and in the herbarium of "Roma Tre" University. Important contributions have been made by several students native to the areas under consideration. A comparative analysis with local specific ethnobotanical literature was carried out. Results The paper reports several examples concerning human and veterinary popular medicine and in addition some anti-parasitic, nutraceutic, dye and miscellaneous uses are also described. Moreover vernacular names and toponyms are cited. Eight regions of central and southern Italy (particularly Latium, Abruzzo, Marche and Basilicata were investigated and the data obtained are presented in 32 papers. Most of the species of ethnobotanical interest have been listed in Latium (368 species, Marche (274 and Abruzzo (203. The paper also highlights particularly interesting aspects or uses not previously described in the specific ethnobotanical literature. Conclusion Phyto-therapy in central and southern Italy is nowadays practised by a few elderly people who resort to medicinal plants only for mild complaints (on the contrary food uses are still commonly practised. Nowadays therapeutic uses, unlike in the past, are less closely or not at all linked to ritual aspects. Several

  16. The Herpetology of the Southern Kalahari domain

    OpenAIRE

    W. D Haacke

    1984-01-01

    The herpetofauna of the southern Kalahari has mixed affinities, as this area lies on a rainfall gradient in a critical area where a transition between the arid south-west and the moister north-east takes place. As the variation in substrate type is relatively limited, the effect of the rainfall gradient appears to influence and determine the range limits of many taxa in both directions, resulting in an area in which of 55 recorded reptiles, 11 western taxa overlap or form a parapatric zone wi...

  17. Geo-Engineering in the Southern Ocean

    OpenAIRE

    Paull, John

    2009-01-01

    Ocean Dumping A German research vessel, the Polarstern, is on a 70 day exercise of dumping 20 tonnes of ferrous sulphate (iron sulphate, FeSO4) in the Southern Ocean at a latitude of 46° south. The LOHAFEX experiment of the Alfred Wegner Institute for Polar & Marine Research project will increase the iron level of the treated ocean area by a factor of up to 24 times “the natural iron concentration”. The target area is 20 kilometres in diameter, i.e. approximately 320 square kilometres. It ...

  18. Northern and Southern RE Groups Ended Resultlessly

    Institute of Scientific and Technical Information of China (English)

    2005-01-01

    In September 2002, "Organizing of National Rare EarthEnterprises Group" which was delivered by original NationalEconomy & Trade Committee and original National PlanningCommittee, Ministry of Finance P.R.C, Ministry of Land &Resource P.R.C. and Ministry of Foreign Economy & Trade,was approved by the State Council of P.R.C. to organizeSouthern and Northern Rare Earth Groups. On October 30,2002, China Northern RE Group Co., Ltd Preparation Teamheld the foundation convention in Baotou, which drew thecurtain of ...

  19. The Sizes of Double Minutes in Human Ovarian Cancer Cells and Mouse MTX-resistant Cells Determined by Pulsed Field Gradient Gel Electrophoresis and Southern Blotting%人卵巢癌细胞及小鼠MTX抗性细胞中DMs大小的测定

    Institute of Scientific and Technical Information of China (English)

    张钰; 邓新宇; 白静; 李璞; 傅松滨

    2006-01-01

    目的 测定肿瘤细胞及耐药性细胞中双微体(double minutes,DMs)的大小.方法 应用PFGE(Pulsed field gradient gel electrophoresis)与Southern印迹杂交技术,对人卵巢癌细胞UACC-1598及氨甲蝶呤(Methotrexate,MTX)抗性的小鼠胚胎成纤维细胞中DMs的大小进行检测.结果 发现UACC-1598细胞中存在2.8Mb、2.1Mb及1.4Mb的DMs群体,提示多拷贝的扩增基因及其邻近的染色体区域经染色体断裂、易位及重排形成较大的DMs.同时,用浓度逐渐增高的MTX对小鼠胚胎成纤维细胞进行体外诱导,分离出富含DMs的不同MTX抗性程度的细胞群体.在MTX抗性细胞中检测到2.5Mb及1.4Mb的DMs群体,MTX100细胞中以1.4Mb的DMs群体为主,而MTX500细胞中以2.5Mb的DMs群体为主.结论 MTX细胞中产生的扩增子结构在演化过程中趋向于寡聚化或多聚化形成较大片段的DMs.

  20. Modelling Water Trade in the Southern Murray-Darling Basin

    OpenAIRE

    Peterson, D.; Dwyer, G.; D. Appels; Fry, J

    2005-01-01

    This Productivity Commission staff working paper, 'Modelling Water Trade in the Southern Murray-Darling Basin', was released in November 2004. It examines the likely economic impacts of expanding water trade in the southern Murray-Darling Basin. The paper uses TERM-Water, a bottoms-up regional CGE model of the Australian economy, to examine the regional effects of expanding trade of irrigation water in the southern Murray-Darling Basin. The study finds that water trading dampens the impact of...

  1. Southern Ocean Sector Centennial Climate Variability and Recent Decadal Trends

    OpenAIRE

    Latif, Mojib; Martin, Torge; Park, Wonsun

    2013-01-01

    Evidence is presented for the notion that some contribution to the recent decadal trends observed in the Southern Hemisphere, including the lack of a strong Southern Ocean surface warming, may have originated from longer-term internal centennial variability originating in the Southern Ocean. The existence of such centennial variability is supported by the instrumental sea surface temperatures (SSTs), a multimillennial reconstruction of Tasmanian summer temperatures from tree rings, and a mill...

  2. DIET OF THE SOUTHERN TOAD (BUFO TERRESTRIS) FROM THE SOUTHERN EVERGLADES

    Science.gov (United States)

    We examined the diet of a February-May sample of the southern toad (Bufo terrestris) from the Everglades National Park. Above the familial level, 13 taxa were consumed, but ants (Hymenoptera) and beetles (Coleoptera) were consumed most by, and in the greatest number of sto...

  3. Study on the Economic Differences between Northern and Southern Xinjiang

    Institute of Scientific and Technical Information of China (English)

    Juncheng; DONG

    2014-01-01

    There are great regional economic differences between northern and southern Xinjiang and the expansion of regional economic differences jeopardize social development and social stability,resulting in more serious polarization between the rich and the poor in northern and southern Xinjiang,thereby hampering further improvement of the economic efficiency in Xinjiang. Using factor analysis,this article carries out comprehensive analysis of regional economic differences in Xinjiang,derives the reasons for regional economic differences between northern and southern Xinjiang,and proposes recommendations for narrowing the regional economic differences between northern and southern Xinjiang.

  4. Reappraisal of the seismotectonics of southern Ontario

    International Nuclear Information System (INIS)

    The fundamental objectives of this study were to review and improve the seismological data base as an aid in more realistic evaluation of seismic hazard in southern Ontario. For this purpose, the following procedures have been undertaken: In the first stage, the types of errors in earthquake location files are identified, sources of uncertainties are discussed and a sensitivity analysis of the errors to different parameters is presented. In the second stage, a group location technique, Joint Hypocenter Determination (JHD), has been utilized to improve the locations of a group of 67 well-recorded events, mostly from the more active region near the Ottawa River and in western Quebec. The third stage, to relocate smaller and less reliably detected events in southern Ontario, utilized a nw algorithm, 'HYPOCENTER', which proved very efficient and flexible in the test runs for handling local explosion and natural events. A preliminary interpretation of the seismicity patterns in the study regions shows that earthquakes of magnitude 3 and larger tend to align along preferred seismic trends which may, in turn, be controlled by weakness planes in the Earth's crust. These inferred trends coincide with dominant northwesterly and northeasterly striking structural directions. For earthquakes smaller than magnitude 4 prior to 1970 and for microearthquakes (M<3) which occurred near the Lake Ontario shoreline, the detection coverage was not sufficient to conclusively discuss accurate locations and causative mechanisms

  5. A CO Survey of the Southern Galaxy

    Science.gov (United States)

    Bronfman, L.; May, J.; Luna, A.

    On December 12th 1982 the 1.2 mSouthern Millimeter Wave Telescope, an instrument specifically designed for CO surveys of molecular clouds in the Southern Galaxy, arrived Cerro Tololo after being constructed and tested atop the roof of the Goddard Institute for Space Studies by Columbia University staff and students, and by Universidad de Chile and NASA personnel. The telescope saw first light on December 22nd 1982, and has been operational ever since. During these years we have completed deep CO surveys of the Carina arm (Grabelsky et al. 1987), the IV galactic quadrant (Bronfman et al. 1988), the III galactic quadrant (May et al. 1993), and the galactic center (Bitran et al. 1997), contributing with a major fraction of the presently available galactic CO data. When combined with CO surveys of the I and II galactic quadrants obtained with its twin instrument, the Northern 1.2m Millimeter Wave Telescope now at the Center for Astrophysics, these data provided for the first time a complete, well sampled, and homogeneous picture of the molecular gas content of the Milky Way.

  6. Detector Considerations for a HAWC Southern Observatory

    CERN Document Server

    DuVernois, Michael

    2015-01-01

    The High-Altitude Water Cherenkov (HAWC) observatory in central Mexico is currently the world's only synoptic survey instrument for gamma rays above 1 TeV. Because there is significant interest in covering the full TeV sky with a survey instrument, we have examined options for a Southern Hemisphere extension to HAWC. In addition to providing all-sky coverage of TeV sources, a southern site could complement existing surveys of the densest part of the Galactic Plane, provide continuous monitoring of Galactic and extragalactic transient sources in both Hemispheres, and simplify the analysis of spatially extended signals such as diffuse gamma rays and the TeV cosmic-ray anisotropy. To take advantage of the air-shower physics and lower the energy threshold of the experiment as much as possible, a high altitude site above 5000 m a.s.l (vs. 4100 m a.s.l. at the current site in Mexico) has been specified. To facilitate efficient detector construction at such altitudes, the detector tanks would be assembled at lower a...

  7. Cassini observations of Saturn's southern polar cusp

    Science.gov (United States)

    Arridge, C. S.; Jasinski, J. M.; Achilleos, N.; Bogdanova, Y. V.; Bunce, E. J.; Cowley, S. W. H.; Fazakerley, A. N.; Khurana, K. K.; Lamy, L.; Leisner, J. S.; Roussos, E.; Russell, C. T.; Zarka, P.; Coates, A. J.; Dougherty, M. K.; Jones, G. H.; Krimigis, S. M.; Krupp, N.

    2016-04-01

    The magnetospheric cusps are important sites of the coupling of a magnetosphere with the solar wind. The combination of both ground- and space-based observations at Earth has enabled considerable progress to be made in understanding the terrestrial cusp and its role in the coupling of the magnetosphere to the solar wind via the polar magnetosphere. Voyager 2 fully explored Neptune's cusp in 1989, but highly inclined orbits of the Cassini spacecraft at Saturn present the most recent opportunity to repeatedly study the polar magnetosphere of a rapidly rotating planet. In this paper we discuss observations made by Cassini during two passes through Saturn's southern polar magnetosphere. Our main findings are that (i) Cassini directly encounters the southern polar cusp with evidence for the entry of magnetosheath plasma into the cusp via magnetopause reconnection, (ii) magnetopause reconnection and entry of plasma into the cusp can occur over a range of solar wind conditions, and (iii) double cusp morphologies are consistent with the position of the cusp oscillating in phase with Saturn's global magnetospheric periodicities.

  8. SOAR + SMARTS Southern White Dwarf Survey

    Science.gov (United States)

    Subasavage, John P.; Lepine, S.

    2012-01-01

    We present early results from the SOAR + SMARTS Southern White Dwarf SURVEY (SSSWDS). Our initial sift of relatively bright (15 < V < 18), white dwarf candidates uses the technique of reduced proper motion with inputs from the SUPERBLINK proper motion database combined with photographic magnitudes. Crude distance estimates from the linear photographic magnitude-color relation of Oppenheimer et al. 2001 are obtained and permit prioritized follow-up. For confirmation of luminosity class, we use the SOAR telescope atop Cerro Pachon equipped with the Goodman Spectrograph and a moderate resolution grating. In tandem, we acquire multi-epoch, optical Johnson-Kron-Cousins BVRI photometry using the SMARTS 1.0m telescope atop CTIO. Combined with JHK from 2MASS, we compare the photometric SED to relevant white dwarf model atmospheres to estimate physical parameters (e.g., effective temperature, mass) and distance. For the nearest targets, specifically those within the RECONS (www.recons.org) horizon of 25 pc, we aim to obtain trigonometric parallaxes as part of the Cerro Tololo Inter-American Observatory Parallax Investigation (CTIOPI) project being conducted at the SMARTS 0.9m telescope. To date, we have confirmed 100 relatively bright, new white dwarfs in the southern hemisphere. Of those, 13 are estimated to be within our 25 pc horizon-of-interest, including two that are estimated to be within 15 pc. Ongoing observations will boost these figures by the end of the project.

  9. The Eradication of Rinderpest from Southern Sudan

    International Nuclear Information System (INIS)

    In 1994, Veterinaires Sans Frontieres (VSF) Belgium was one of the NGOs that joined the Operation Lifeline Sudan (OLS) Livestock Programme coordinated by the United Nations Children's Fund (UNICEF) in conflict-affected southern Sudan. The objective of the programme was to improve household food security through the control of rinderpest and the establishment of community-based animal health services. VSF Belgium trained and supported community-based animal health workers (CAHWs) in several agropastoralist communities of southern Sudan. The CAHWs carried out rinderpest vaccination using heat-stable vaccine, and provided vaccinations and treatments for other important diseases of cattle, sheep, goats and poultry. In 1996, VSF Belgium set up a training centre for mid-level animal health workers, to provide a cadre of animal health auxiliaries (AHAs) as CAHW supervisors and field coordinators. As a result of the widespread vaccination efforts, rinderpest outbreaks decreased and apparently stopped. The last confirmed rinderpest outbreak was in 1998, although there was a suspected but unconfirmed outbreak in 2001. About this time, FAO-GREP advised the Republic of Sudan to stop vaccinating and to enter the surveillance phase of the OIE Pathway to freedom from rinderpest.

  10. Comparison of Two Widely Used Human Papillomavirus Detection and Genotyping Methods, GP5+/6+-Based PCR Followed by Reverse Line Blot Hybridization and Multiplex Type-Specific E7-Based PCR.

    Science.gov (United States)

    Clifford, Gary M; Vaccarella, Salvatore; Franceschi, Silvia; Tenet, Vanessa; Umulisa, M Chantal; Tshomo, Ugyen; Dondog, Bolormaa; Vorsters, Alex; Tommasino, Massimo; Heideman, Daniëlle A M; Snijders, Peter J F; Gheit, Tarik

    2016-08-01

    GP5+/6+-based PCR followed by reverse line blot hybridization (GP5+/6+RLB) and multiplex type-specific PCR (E7-MPG) are two human papillomavirus (HPV) genotyping methodologies widely applied in epidemiological research. We investigated their relative analytical performance in 4,662 samples derived from five studies in Bhutan, Rwanda, and Mongolia coordinated by the International Agency for Research on Cancer (IARC). A total of 630 samples were positive by E7-MPG only (13.5%), 24 were positive by GP5+/6+RLB only (0.5%), and 1,014 were positive (21.8%) by both methods. Ratios of HPV type-specific positivity of the two tests (E7-MPG:GP5+/6+RLB ratio) were calculated among 1,668 samples that were HPV positive by one or both tests. E7-MPG:GP5+/6+RLB ratios were >1 for all types and highly reproducible across populations and sample types. E7-MPG:GP5+/6+RLB ratios were highest for HPV53 (7.5) and HPV68 (7.1). HPV16 (1.6) and HPV18 (1.7) had lower than average E7-MPG:GP5+/6+RLB ratios. Among E7-MPG positive infections, median mean fluorescence intensity (MFI; a semiquantitative measure of viral load) tended to be higher among samples positive for the same virus type by GP5+/6+RLB than for those negative for the same type by GP5+/6+RLB. Exceptions, however, included HPV53, -59, and -82, for which the chances of being undetected by GP5+/6+RLB appeared to be MFI independent. Furthermore, the probability of detecting an additional type by E7-MPG was higher when another type was already detected by GP5+/6+RLB, suggesting the existence of masking effects due to competition for GP5+/6+ PCR primers. In conclusion, this analysis is not an evaluation of clinical performance but may inform choices for HPV genotyping methods in epidemiological studies, when the relative merits and dangers of sensitivity versus specificity for individual types should be considered, as well as the potential to unmask nonvaccine types following HPV vaccination. PMID:27225411

  11. 实时PCR和PCR-RDB法检测人乳头瘤病毒的比对研究%Comparison of real time PCR and PCR¯reverse dot blot hybridization for detection of Human papillomavirus

    Institute of Scientific and Technical Information of China (English)

    肖克林; 严泽浩; 罗茗月; 麦光兴; 陈熙; 熊礼宽

    2014-01-01

    目的:比较实时 PCR 法和 PCR-反向点杂交法(PCR-RDB)检测 HPV 的一致性。方法收集109份女性生殖道样本,利用实时 PCR 法和 PCR-RDB 法分别检测 HPV 感染和基因型分布情况,不一致样本采用 PCR-悬浮芯片杂交法复检。结果83.5%(91/109)的样本两种方法结果一致(kappa=0.671),18例不一致样本 PCR-悬浮芯片杂交法复检显示7例与实时 PCR相符,11例与 PCR-RDB 相符;高、低病毒载量组间 PCR-RDB 法的检测结果差异无统计学意义(χ2=1.476,P =0.224)。结论实时 PCR 和 PCR-RDB 两法用于 HPV 检测一致性一般;HPV 病毒载量在103~108范围内时 PCR-RDB 法的阳性率较稳定。%Objective To compare real time PCR with PCR-reverse dot blot hybridization (PCR-RDB)for detecting human pap-illomavirus (HPV)infection in women.Methods A total of 109 genital specimens from women were collected in the study.All specimens were tested HPV by using real time PCR and PCR-RDB,discrepant samples were tested again by PCR-xMAP.Results The concordant rate was 83.5%(91/109)between real time PCR and PCR-RDB (kappa=0.671),the other 18 discrepant samples were retested by PCR-xMAP,7 of those were identical with real time PCR and 11 with PCR-RDB.No differences of PCR-RDB pos-itive rates were found between the high and low viral load groups (χ2 =1.476,P =0.224).Conclusion It demonstrated moderate consistency between real time PCR and PCR-RDB.The HPV positive rates of PCR-RDB were stable when the viral loads were 103-108 .

  12. Magma Piracy in the Southern Mariana Backarc

    Science.gov (United States)

    Becker, N. C.; Fryer, P.; Martinez, F.; Stern, R. J.; Bloomer, S. H.

    2001-12-01

    Since 1997 the southern Mariana convergent margin system has been mapped with Hydrosweep, MR-1, and SeaBeam swath sonar systems on five cruises resulting in 168,500 km2 of bathymetry data and 186,800 km2 of sidescan data, revealing anomalous processes relative to the rest of the Mariana region. Most of the Mariana Arc is characterized by arc volcanism dominated by large, central volcanoes located at the boundary between a backarc basin with slow-spreading ridge morphology and a nonaccretionary forearc composed of Eocene volcanic arc rocks But southwest of Tracey Seamount, the southernmost large central arc volcano, the character of the arc and backarc changes dramatically. The arc volcanoes become small or nonexistent, but those that do occur lie along relict spreading fabric within the backarc basin. Furthermore, the spreading center appears to have an inflated, fast-spreading morphology, including dueling propagator fabric, and this southern backarc basin forms a shallow plateau overall. The spreading center then becomes less well-defined west of 143oE, and the volcanism appears to cease altogether west of 142oE in an area of amagmatic rifting, an observation supported by earthquake focal mechanisms and magnetics. The inflated morphology of the spreading axis, along with the absence or reduced size of nearby arc volcanoes suggests that arc magmas have been entrained into the backarc-spreading magmatic system. This "magma piracy" would result in arc magma being erupted at the backarc spreading center, therefore the backarc crust would be formed in part from arc magmas. Dredge samples from along the active ridge show compositions consistent with this suggestion. We suggest that this magma piracy has dominated the southern backarc basin for at least the last 3 m.y. since the robust spreading began. We suggest that the apparently higher magma production rate and the hybridized crust could account for the shallowness of the basin, as the more evolved arc-lavas would

  13. Seismic unrest at Katla Volcano- southern Iceland

    Science.gov (United States)

    jeddi, zeinab; Tryggvason, Ari; Gudmundsson, Olafur; Bödvarsson, Reynir; SIL Seismology Group

    2014-05-01

    Katla volcano is located on the propagating Eastern Volcanic Zone (EVZ) in South Iceland. It is located beneath Mýrdalsjökull ice-cap which covers an area of almost 600 km2, comprising the summit caldera and the eruption vents. 20 eruptions between 930 and 1918 with intervals of 13-95 years are documented at Katla which is one of the most active subglacial volcanoes in Iceland. Eruptions at Katla are mainly explosive due to the subglacial mode of extrusion and produce high eruption columns and catastrophic melt water floods (jökulhlaups). The present long Volcanic repose (almost 96 years) at Katla, the general unrest since 1955, and the 2010 eruption of the neighbouring Eyjafjallajökull volcano has prompted concerns among geoscientists about an imminent eruption. Thus, the volcano has been densely monitored by seismologists and volcanologists. The seismology group of Uppsala University as a partner in the Volcano Anatomy (VA) project in collaboration with the University of Iceland and the Icelandic Meteorological Office (IMO) installed 9 temporary seismic stations on and around the Mýrdalsjökull glacier in 2011. Another 10 permanent seismic stations are operated by IMO around Katla. The project's data collection is now finished and temporary stations were pulled down in August 2013. According to seismicity maps of the whole recording period, thousands of microearthquakes have occurred within the caldera region. At least three different source areas are active in Katla: the caldera region, the western Godaland region and a small cluster at the southern rim of Mýrdalsjökull near the glacial stream of Hafursarjökull. Seismicity in the southern flank has basically started after June 2011. The caldera events are mainly volcano-tectonic, while western and southern events are mostly long period (lp) and can be related to glacial or magmatic movement. One motivation of the VA Katla project is to better understand the physical mechanism of these lp events. Changes

  14. New cooperative seismograph networks established in southern California

    Science.gov (United States)

    Hill, D.P.

    1974-01-01

    Southern California has more active faults located close to large, urban population centers than any other region in the United States. Reduction of risk to life and property posed by potential earthquakes along these active faults is a primary motivation for a cooperative earthquake research program between the U.S Geological Survey and major universities in Southern California. 

  15. The earliest unequivocally modern humans in southern China

    NARCIS (Netherlands)

    Liu, Wu; Martinón-Torres, María; Cai, Yan-Jun; Xing, Song; Tong, Hao-Wen; Pei, Shu-Wen; Sier, Mark Jan; Wu, Xiao-Hong; Edwards, R Lawrence; Cheng, Hai; Li, Yi-Yuan; Yang, Xiong-Xin; de Castro, José María Bermúdez; Wu, Xiu-Jie

    2015-01-01

    The hominin record from southern Asia for the early Late Pleistocene epoch is scarce. Well-dated and well-preserved fossils older than ∼45,000 years that can be unequivocally attributed to Homo sapiens are lacking. Here we present evidence from the newly excavated Fuyan Cave in Daoxian (southern Chi

  16. Evolution of HIV/AIDS in Southern Africa

    NARCIS (Netherlands)

    Lauwers, L.; Pruyt, E.; Hens, L.; Brans, J.p.

    2008-01-01

    This paper presents a system dynamics model to study the spread of HIV/AIDS in Southern Africa. The HIV/AIDS model includes important feedback mechanisms of the spread of HIV/AIDS, and partly explains the dynamics of the epidemic in a representative Southern African country. The HIV/AIDS model indic

  17. The quinoa boom of the southern Bolivian Altiplano

    DEFF Research Database (Denmark)

    Sander, Lasse; Jacobsen, Sven-Erik

    2014-01-01

    like drought, frost, or soil salinity. Quinoa is thus an exceptional income opportunity in the arid southern Bolivian Altiplano, an area endemically struck by rural poverty and malnutrition. In the early 1970s, the Bolivian government introduced the first tractors to southern Bolivia’s Salar region...

  18. Biological Correlates of Northern-Southern Italy Differences in IQ

    Science.gov (United States)

    Templer, Donald I.

    2012-01-01

    The present study was intended to provide perspective, albeit less than unequivocal, on the research of Lynn (2010) who reported higher IQs in the northern than southern Italian regions. He attributes this to northern Italians having a greater genetic similarity to middle Europeans and southern Italians to Mediterranean people. Higher regional IQ…

  19. 75 FR 39655 - Southern New Mexico Resource Advisory Committee

    Science.gov (United States)

    2010-07-12

    ... Forest Service Southern New Mexico Resource Advisory Committee AGENCY: Forest Service, USDA. ACTION: Notice of meeting. SUMMARY: The Southern New Mexico Resource Advisory Committee (RAC) will meet in... sessions. July 6, 2010. Alan E. Koss, Designated Federal Official. BILLING CODE 3410-11-P...

  20. Approaching Southern Theory: Explorations of Gender in South African Education

    Science.gov (United States)

    Epstein, Debbie; Morrell, Robert

    2012-01-01

    This article draws on the five other papers from South Africa in this issue of "Gender and Education" to consider how Southern theory has been developed and is developing in relation to gender and education in South Africa. We argue that Southern theory is not an on-the-shelf solution to global geopolitical inequalities but a work in process that…

  1. Great Carbonate Bank of Yucatan, Southern Mexico

    Energy Technology Data Exchange (ETDEWEB)

    Viniegra-O, F.

    1981-01-01

    Since 1972, numerous large and giant oil fields have been discovered in the Reforma area of Chiapas and Tabasco States, southern Mexico, and on the offshore Campeche shelf west of Campeche State. The huge carbonate bank with which these discoveries are associated is called the Great Carbonate Bank of Yucatan. Present trap structures are mainly fractured and faulted domal salt pillows created during the Laramide orogeny. The Great Carbonate Bank of Yucatan is believed to include not just the Yucatan Peninsula, but also a part of coastal Veracruz State, where several discoveries have been made in carbonate rocks of Early to Middle Cretaceous ages in thrust sheets along the western margin of the Veracruz basin, which are now buried beneath the coastal plain. It is probable that large, subthrust, anticlinal structures underlie the thrust sheets along the western margin of the Veracruz basin, and these when drilled, may contain important hydrocarbon accumulations. (JMT)

  2. Neonatal screening for hypothyroidism in Southern Thailand

    International Nuclear Information System (INIS)

    Thyroid stimulating hormone (TSH) determination by a radioimmunoassay on dried blood spots was selected as the screening method for congenital hypothyroidism in Southern Thailand. Blood from the infant's heel was obtained in 7814 newborns on the fifth day of life. Infants with TSH values greater than 25 mU/L were recalled for a more careful clinical examination and to have their T4 (thyroxine) and TSH re-estimated. Fifty-four infants with TSH values between 25 and 50 mU/L were found to be normal at re-evaluation. These are still being followed longitudinally for full confirmation. Two with values above 50 mU/L, although clinically euthyroid, were found to be hypothyroid by T3, T4, thyroid scintigraphy and bone age on roentgenography. Replacement therapy has been started. We have shown that a screening program for neonatal hypothyroidism can be done, and is probably worthwhile and perhaps even cost-effective

  3. SOUTH POL: Revealing the Polarized Southern Sky

    Science.gov (United States)

    Magalhães, A. M.

    2014-10-01

    SOUTH POL will be a survey of the Southern sky in optical polarized light. It will use a newly designed polarimeter for an 80cm Robotic Telescope. Telescope and polarimeter will be installed at CTIO, Chile. The initial goal is to cover the sky south of declination -15° in about two years of observing time, aiming at a polarimetric accuracy ≤ 0.1% down to V=15, with a camera covering a field of about 2.0 square degrees. SOUTH POL will impact areas such as Cosmology, Extragalactic Astronomy, Interstellar Medium of the Galaxy and Magellanic Clouds, Star Formation, Stellar Envelopes, Stellar Explosions and Solar System, among others. The polarimeter is currently being built and its optics and electronics assembled. We will describe the current status of the project. This project is supported by FAPESP. AMM is also supported by CNPq.

  4. The lithospheric mantle below southern West Greenland

    DEFF Research Database (Denmark)

    Sand, Karina Krarup; Waight, Tod Earle; Pearson, D. Graham; Nielsen, Troels F.D.; Makovicky, Emil; Hutchison, Mark T.

    Geothermobarometry of primarily garnet lherzolitic xenoliths from several localities in southern West Greenland is applied to address the diamond potential, pressure and temperature distribution and the stratigraphy of the subcontinental lithospheric mantle ~600 Ma ago. The samples are from...... been conducted. No variation in P-T gradients between the three distinct crustal areas has been discerned. We find that the lithospheric mantle beneath this region extended to a depth of 215 km at the time of eruption, with a geotherm similar to those defined by peridotites from the Slave craton and...... the Kirkland Lake locality within the Superior craton. In supporting previous studies we find that the continental lithospheric mantle is layered and increases in fertility with depth. Twenty-five of 32 investigated samples are estimated to be derived from the diamond stability field that extends into...

  5. Solvent Extraction Developments in Southern Africa

    Institute of Scientific and Technical Information of China (English)

    2006-01-01

    The largest solvent-extraction plant in the world at the time, the Nchanga Copper Operation, was in Zambia. The first commercial process using solvent extraction for the refining of the platinum-group metals was in South Africa. More recently, the Southern African region has seen the implementation of solvent extraction for other base metals, precious metals, and specialty metals. These include the world firsts of primary production of zinc at Skorpion Zinc in Namibia and the large-scale refining of gold by Harmony Gold in South Africa. Several other flowsheets that use solvent-extraction technology are currently under commissioning, development, or feasibility study for implementation in this part of the world, including those for the recovery of copper, cobalt, nickel, tantalum, and niobium.

  6. The spatial distribution of southern clusters

    International Nuclear Information System (INIS)

    We present a determination of the spatial distribution of clusters in the Southern Cluster Survey. We find the mean separation of clusters to be 60 ± 5 h-1 Mpc and the two-point correlation function to be well fitted by a power-law with index -2.3. The associated correlation length is 30 ± 5 h-1 Mpc, although the results are consistent with there being no clustering on scales ≥ 20 h-1 Mpc. These results, calculated from the angular correlation function, are found to be robust; they are relatively insensitive to the parameters of the adopted model. We compare these results with those obtained from Abell's northern cluster catalogue by Bahcall and Soneira and advance reasons for the discrepancy at large separations. (author)

  7. Prevalence of Asthma in Southern Punjab, Pakistan.

    Directory of Open Access Journals (Sweden)

    Maryum Khan

    2016-01-01

    Full Text Available AbstractAsthma is exaggerated response of immune system which is a leading cause of death in the third world. Main causes of asthma are allergy, smoking, drugs like NSAID (Aspirin and family history. Objective of study was to check the prevalence of asthma in different age groups and its impact on socioeconomical behaviors of the peoples of southern Punjab, by developing a questionnaire. Incidence of asthmatic attack in the age group of 20 to 60 years was more than in age group of 20 years, furthermore the incidence was found to be more common in females as compare to males. The smokers were at more risk to develop the disease as compared to the nonsmokers.

  8. Cooling and eutrophication of southern Chilean lakes.

    Science.gov (United States)

    Pizarro, Jaime; Vergara, Pablo M; Cerda, Sergio; Briones, Daniela

    2016-01-15

    Understanding the impacts of global warming and human-disturbances on lakes is required for implementing management strategies aimed at mitigating the decline of the quality and availability of water for humans. We assessed temporal trends in water parameters, and the contribution of land use to the eutrophication of the largest lakes of central-southern Chile. The mean values of water parameters varied seasonally, with lakes Chapo and Caburgua exhibiting lower pH, temperature, and N/P ratio values. Over the assessed period (19 years), we found a temporal reduction in water conductivity and temperature of the lakes. The concentration of NO3(-)-N, PO4(3-)-P and dissolved oxygen increased in all the lakes, but pH increased in eight out of the ten lakes. The negative temporal trend in temperature was more pronounced as the depth level increased. Lakes whose basins had a higher percentage of forest plantation and urban areas had larger values of Chlorophyll a and pH, as well as, smaller values of dissolved oxygen. Lakes whose basins included larger percentages of native forest had smaller nutrient (NO3(-)-N, PO4(3-)-P) concentrations. Our findings suggest that decreased rainfall in central-southern Chile due to climate change may cause a decrease of particulate material that is carried by tributaries into the lakes. The observed temporal decrease in temperature, especially at the deeper levels, may be explained by the rapid melting of glaciers. Although the studied lakes are classified as oligotrophic, deforestation and expansion of urban areas around the lakes have led to increased nutrient input, thus accelerating their eutrophication. PMID:26437345

  9. The normal choroidal thickness in southern Thailand

    Directory of Open Access Journals (Sweden)

    Jirarattanasopa P

    2014-11-01

    Full Text Available Pichai Jirarattanasopa,1 Nisa Panon,2 Siriphun Hiranyachattada,2 Patama Bhurayanontachai1 1Department of Ophthalmology, Faculty of Medicine, 2Department of Physiology, Faculty of Science, Prince of Songkla University, Hat Yai, Thailand Objective: To investigate the association between subfoveal choroidal thickness in healthy southern Thailand volunteers and age, axial length, and refractive error.Subjects and methods: This was a prospective cross-sectional case series. A total of 210 eyes of 105 healthy volunteers (86 women, age 23–83 years in southern Thailand were examined with enhanced depth-imaging optical coherence tomography. Subjects with systemic diseases that may affect the choroidal vascular blood vessels, such as diabetes, impaired renal function, and hypertension, were excluded. Refractive error and axial length were measured by autorefractometry and an IOLMaster, respectively. Subfoveal choroidal thickness was measured from the outer border of the retinal pigment epithelium to the inner scleral border in the subfoveal area.Results: The mean subfoveal choroidal thickness was 279.4±75.49 µm, and the mean age was 46.4±16.45 years. Subfoveal choroidal thickness was negatively correlated with age (r2=0.33, P<0.0001 and axial length (r2=0.02, P<0.02. Multivariable regression analysis showed subfoveal choroidal thickness was positively and negatively correlated with a spherical equivalent refractive error and axial length, respectively, when adjusted for age.Conclusion: Age is the most important factor in choroidal thickness rather than axial length and refractive error. Subfoval choroidal thickness was decreased 2.67 µm every year and 14.59 µm with 1 mm increase in axial length. Keywords: choroidal thickness, enhanced depth-imaging optical coherence tomography, swept-source optical coherence tomography

  10. Early ceramic sites in southern Lau, Fiji

    International Nuclear Information System (INIS)

    The Lau Group is a dispersed chain of islands in east Fiji trending north-south on the inactive Lau Ridge remnant volcanic arc, which is part of the convergent margin system comprising the Lau Basin and Tonga Ridge to the east. In the south of the Lau Group are several remote islands that are closer to Tangatapu than they are to the largest islands of Viti Levu and Vanua Levu in the Fiji Group. Two of these islands, Vatoa and Doi islands in the Ono-i-Lau Group, were visited briefly in 2006 after field work on Kabara when the government supply boat 'Sandy' made scheduled stops to unload and collect cargo. Lapita pottery and a fortification were recorded on Doi Island in the Ono Group, and on Vatoa Island a site with plain ware ceramics dating to c. 2000 cal. BP was located. The position of the two remote islands lying between the main islands of Fiji and Tongan archipelago suggests they were particularly subject to influence from population contacts and movements from islands to their east and west in prehistory. In the eighteenth and nineteenth century central and southern Lau were the centre of an important canoe building industry based on the hardwood Instia bijuga (vesi) used to construct large sailing canoes which were the prerogative of Tongan and Fijian chiefs. Archaeological and linguistic studies of the Lau Group suggest a complicated history of population movements earlier during Lapita (2900-2500 BP) and post-Lapita (∼2500-1000 BP) times, which can be examined from the study of ceramic sites in southern Lau. (author). 27 refs., 3 figs

  11. Thunderstorms and thunderstorm precipitations in southern Poland

    Directory of Open Access Journals (Sweden)

    Bielec-Bąkowska Zuzanna

    2014-09-01

    Full Text Available This paper addresses spatial and temporal variability in the occurrence of thunderstorms and related precipitation in southern Poland between 1951 and 2010. The analysis was based on thunderstorm observations and daily precipitation totals (broken down into the few ranges from 15 meteorological stations. It was found that precipitation accompanied an overwhelming majority of thunderstorms. The most frequent range of thunderstorm precipitation totals was 0.1–10.0 mm which accounted for 60% of all values while precipitation higher than 20.0 mm accounted only for ca. 8%. During the study period, long-term change in the number of days with thunderstorm precipitation within a certain range displayed no clear-cut trends. Exceptions included: 1 an increase in the number of days with thunderstorm precipitation in the lowest range of totals (0.1–10.0 mm at Katowice, Tarnów, Rzeszów and Lesko and decrease at Mt. Kasprowy Wierch, 2 an increase in the range 10.1–20.0 mm at Zakopane and 20.1–30.0 mm at Opole, 3 a decrease of the top range (more than 30.0 mm at Mt. Śnieżka. It was found that the heaviest thunderstorm precipitation events, i.e. totalling more than 30 mm, and those events that covered all or most of the study area, occurred at the time of air advection from the southern or eastern sectors and a passage of atmospheric fronts.

  12. Biogeochemistry of southern Australian continental slope sediments

    International Nuclear Information System (INIS)

    Sediment cores from the middle to lower slope of the southern continental margin of Australia between the Great Australian Bight and western Tasmania are compared in terms of marine and terrigenous input signals during the Holocene. The mass accumulation rates of carbonate, organic carbon, biogenic Ba. and Al are corrected for lateral sediment input (focusing), using the inventory of excess 230Th in the sediment normalised to its known production rate in the water column above each site. The biogenic signal is generally higher in the eastern part of the southern margin probably due to enhanced productivity associated with seasonal upwelling off southeastern South Australia and the proximity of the Subtropical Front, which passes just south of Tasmania. The input of Al, representing the terrigenous signal, is also higher in this region reflecting the close proximity of river runoff from the mountainous catchment of southeastern Australia. The distribution pattern of Mn and authigenic U, together with pore-water profiles of Mn++, indicate diagenetic reactions driven by the oxidation of buried organic carbon in an oxic to suboxic environment. Whereas Mn is reduced at depth and diffuses upwards to become immobilised in a Mn-rich surface layer. U is derived from seawater and diffuses downward into the sediment, driven by reduction and precipitation at a depth below the reduction zone of Mn. The estimated removal rate of U from seawater by this process is within the range of U removal measured in hemipelagic sediments from other areas, and supports the proposition that hemipelagic sediments are a major sink of U in the global ocean. Unlike Mn, the depth profile of sedimentary Fe appears to be little affected by diagenesis, suggesting that little of the total Fe inventory in the sediment is remobilised and redistributed as soluble Fe. Copyright (1999) Blackwell Science Pty Ltd

  13. 76 FR 68393 - Endangered and Threatened Wildlife and Plants; Termination of the Southern Sea Otter...

    Science.gov (United States)

    2011-11-04

    ...; Termination of the Southern Sea Otter Translocation Program; Revised Draft Supplemental Environmental Impact Statement on the Translocation of Southern Sea Otters AGENCY: Fish and Wildlife Service, Interior. ACTION... draft supplemental environmental impact statement on the translocation of southern sea otters...

  14. Influence of southern sewage treatment plant on the wastewater quality of southern part of Hyderabad city

    International Nuclear Information System (INIS)

    The wastewater from southern part of Hyderabad city is pumped towards Southern Sewage Treatment Plant (SSTP), but most of the wastewater is leaked for agricultural purpose and a little wastewater reaches up to SSTP. SSTP has three facultative ponds followed by three maturation ponds with the total capacity of 6 million gallon per day (MGD). The wastewater after some biological treatment is again diverted for agriculture purposes. Six samples, three from different sewage stations pumping towards SSTP and three from SSTP were collected and analyzed for 30 different physico-chemical parameters. The sampling scheme was repeated 6 times during November 1999 to May 2000 at an interval of 4 to 5 weeks. The obtained results were analyzed on the statistical basis and a significant improvement was noticed in water quality for chemical oxygen demand (COD), dissolved oxygen (D.O), Kjeldahl nitrogen, organic nitrogen and residues after biological treatment at SSTP. (author)

  15. The Southern California Twin Register at the University of Southern California

    OpenAIRE

    Baker, Laura A.; Barton, Mafalda; Raine, Adrian

    2002-01-01

    The Southern California Twin Register is the result of an effort to recruit twins of all ages in the city of Los Angeles and surrounding areas. The register currently includes an ethnically diverse sample of more than 2600 twin pairs. The most recently recruited pairs have been drawn primarily from computerized records of enrollments in local public school districts, and are comparable in sex and ethnic distributions to the general public school population. An ongoing twin study of social and...

  16. Investment images in Southern Europe: an appreciation of firms in four Southern European cities

    OpenAIRE

    Metaxas, Theodore

    2010-01-01

    The article examines the capacity of four medium-sized cities in Southern Europe, concerning the current situation of their assets (agglomeration economies, urban infrastructures, factors of labor and cost, etc.), the degree of development policies implementation and effectiveness by local authorities and finally the level of local authorities capacity to plan and implement particular policies and partnerships with the private sector in order to shape a favorable and attractive investment ima...

  17. On the Variability of Southern Ocean Front Locations Between Southern Brazil and the Antarctic Peninsula

    OpenAIRE

    Ikeda, Yoshimine; Siedler, Gerold; Zwierz, Marek

    1989-01-01

    A 4-year expendable bathythermograph data set (1984–1987) from the area between southern Brazil and the Antarctic Peninsula provides information on the interannual variability of front locations. Two boundaries of subtropical water at different depths are identified north and south of the Brazil Current-Falkland (Malvinas) Current confluence zone. The northern Subtropical Front is displaced over a large part of the Argentine Basin from one observational period to the other. The shallow southe...

  18. Northerners versus southerners: Italian anthropology and psychology faced with the "southern question".

    Science.gov (United States)

    Cimino, Guido; Foschi, Renato

    2014-11-01

    Following the Unification of Italy (1861), when confronted with the underdevelopment problems of the south that had given rise to the so-called "southern question," some Italian anthropologists and psychologists began to study the populations of the south from the psycho-anthropological point of view. These scientists, at times subject to preconceived ideas toward the southerners, conveyed observations and descriptions of the southern character traits that, in general, were considered different, in a negative sense, with respect to those of the northern peoples. To explain such diversity in the "psychological" characteristics between the north and south of the country (presumed cause also of the south's backwardness), various hypotheses were advanced related to the kind of heredity theory adopted, which could be of, more or less, an "innatist" or "transformist" or "environmentalist" kind. The distinction proposed in this article between at least 2 different "hereditarian" theories formulated by the Italian scientists, and the confrontation of these theories with the hypotheses expressed by the "southernist" sociologists, contrary to the idea of "racial varieties" present in the Italian population, allows one to understand in what way and in what sense, at the threshold of the 20th century, there arose the ideology of "Nordicism" and the roots of racism were planted. PMID:24884999

  19. Exposure to ticks and seroprevalence of [i]Borrelia burgdorferi [/i]among a healthy young population living in the area of southern Podlasie, Poland

    Directory of Open Access Journals (Sweden)

    Anna Pańczuk

    2014-09-01

    Full Text Available [b]Objectives[/b]. The objective of the study was assessment of risk of infection with [i]Borrelia burgdorferi[/i] in the area of southern Podlasie in Poland, near the border with Belarus, by analysis of post-exposure procedure, and evaluation of asymptomatic infection in adolescents bitten by a tick, confirmed by serologic tests. [b]Material and methods[/b]. The study was conducted among 128 healthy individuals aged 16–20 who declared being bitten by a tick. The level of IgM and IgG class antibodies was determined using the immunoenzymatic test (Borrelia 14 kD + OspC IgM ELISA and Borrelia IgG + VlsE ELISA, DRG Diagnostics. Positive and doubtful results were confirmed using the Western blot method (EUROLINE-WB, EUROIMMUN. [b]Results[/b]. In the study group, the largest number of respondents (59.4% declared tick bite in the region of the lower extremities, most often in the knee pit. Among the methods for removing the tick the largest number of respondents indicated removing it with the use of tweezers, with a simple, swift steady movement (29.7%, and pulling it out with the fingers (22.7%. In the ELISA test, a positive or doubtful result in at least one class was observed in 25.0% of respondents (n=32/128: in IgM class – 23.4% (n=30/128, and in IgG class – 4.7% (n=6/128. After verification with the Western blot test, infection was confirmed in 5.5% of respondents (n=7/128: in IgM class – 1.6% (n=2/128, in IgG class – 3.9% (n=5/128. In IgM class antibodies, the Western blot test confirmed positive or doubtful results of the ELISA test in 6.7%, while in IgG class antibodies in 83.3%. [b]Conclusion[/b]. Evaluation of the actual infection with [i]Borrelia spp.[/i] using serologic tests is difficult due to a certain non-specificity of the ELISA test, especially in IgM class antibodies, and difficulties with performance of a wide scope of specific Western blot tests. The variety of methods of tick removal declared by adolescents suggests

  20. Volatile organic compound sources for Southern Finland

    Science.gov (United States)

    Patokoski, Johanna; Ruuskanen, Taina M.; Kajos, Maija K.; Taipale, Risto; Rantala, Pekka; Aalto, Juho; Ryyppö, Timo; Hakola, Hannele; Rinne, Janne

    2014-05-01

    Volatile organic compounds (VOCs) have several sources, both biogenic and anthropogenic. Emissions of biogenic VOCs in a global scale are estimated to be an order of magnitude higher than anthropogenic ones. However, in densely populated areas and during winter time the anthropogenic VOC emissions dominate over the biogenic ones. The aim of this study was to clarify potential local sources and source areas of VOCs in different seasons. Diurnal behaviour in winter and spring were also compared at two different sites in Finland: SMEAR II and III (Station for Measuring Ecosystem - Atmosphere Relations). SMEAR II is a rural site located in Hyytiälä in Southern Finland 220 km North-West from Helsinki whereas SMEAR III is background urban site located 5 km from the downtown of Helsinki. The volume mixing ratios of VOCs were measured with a proton-transfer-reaction mass spectrometer (PTR-MS, Ionicon Analytik GmbH, Austria) during years 2006-2011. Other trace gases such as CO, NOXand SO2 were also measured in both sites and used for source analysis. Source areas for long term VOC measurements were investigated with trajectory analysis and sources for local and regional concentrations were determined by Unmix multivariate receptor model. Forest fires affect air quality and the biggest smoke plumes can be seen in satellite images and even hinder visibility in the plume areas. They provide temporally and spatially well-defined sources that can be used to verify source area estimates. During the measurement periods two different forest fire episodes with several hotspots, happened in Russia. Forest fires which showed up in these measurements were in 2006 near the border of Finland in Vyborg area and 2010 in Moscow area. Forest fire episodes were clearly observed in trajectory analysis for benzene, toluene and methanol and also CO and NOX. In addition to event sources continuous source areas were determined. Anthropogenic local sources seemed to be dominant during winter in

  1. Stars and Seasons in Southern Africa

    Science.gov (United States)

    Snedegar, K. V.

    Although the indigenous people of Southern Africa traditionally viewed the sky as a place quite apart from the Earth, they believed celestial phenomena to be natural signs united with those of the Earth in a harmonious synchronicity. There is no substantial evidence that the precolonial Africans imagined a casual relationship between celestial bodies and the seasonal patterns of life on Earth. They did, however, recognize a coincidental relationship. The traditional African cosmos, then, worked as a noetic principle unifying the observed motions of celestial bodies, the sequence of seasons, and the behavior of plants and animals. Such a cosmos, with local peculiarities, was widely understood in Southern Africa before the end of the last century. By the early 20th century European colonial paradigms had largely obliterated this African worldview. This paper will offer a partial reconstruction. Pre-colonial South African people viewed time as a sequence of discrete natural events; through annual repetition these events served as a guide for proper human action. The South Africans analyzed the passage of time in terms of the motions of celestial bodies, the maturation of beneficial plants, and the mating patterns of animals. The rightful course of human life was seen to fit within the seasonal context of these natural phenomena. The visibility of conspicuous stars and asterisms marked significant times of year. For instance, the Lovedu people greeted the dawn rising of Canopus with joy: "The boy has come out." The star was a signal for rainmaking and boys' initiation ceremonies to proceed. The Venda constellation Thutlwa, the giraffes, comprises α and β Crucis and α and β Centauri. In October Thutlwa skims the trees of the evening horizon. The Venda Thutlwa literally means 'rising above the trees,' an allusion to the majestic vegetarian creatures and the stars advising the people to be done with their spring planting. This paper will describe stellar associations

  2. Clean Air Slots Amid Dense Atmospheric Pollution in Southern Africa

    Science.gov (United States)

    Hobbs, Peter V.

    2003-01-01

    During the flights of the University of Washington's Convair-580 in the Southern African Regional Science Initiative (SAFARI 2000) in southern Africa, a phenomenon was observed that has not been reported previously. This was the occurrence of thin layers of remarkably clean air, sandwiched between heavily polluted air, which persisted for many hours during the day. Photographs are shown of these clean air slots (CAS), and particle concentrations and light scattering coefficients in and around such slot are presented. An explanation is proposed for the propensity of CAS to form in southern Africa during the dry season.

  3. Stray dogs as reservoirs of the zoonotic agents Leptospira interrogans, Trypanosoma cruzi, and Aspergillus spp. in an urban area of Chiapas in southern Mexico.

    Science.gov (United States)

    Jimenez-Coello, Matilde; Ortega-Pacheco, Antonio; Guzman-Marin, Eugenia; Guiris-Andrade, Dario M; Martinez-Figueroa, Laura; Acosta-Viana, Karla Y

    2010-03-01

    This investigation determined the presence and prevalence of the zoonotic agents Leptospira interrogans, Trypanosoma cruzi, and Aspergillus spp. in the stray dog population (a total of 224 stray dogs) in an urban area of Southern Mexico. Blood serum samples were taken from all dogs, and root hair samples were taken from dogs with skin lesions and partial alopecia. IgG antibodies for L. interrogans from 10 serovars were detected using the microscopic agglutination test. Immunofluorescence antibody test and Western blot assay were used for serologic diagnosis of T. cruzi. The Sabouraud medium was used to isolate Aspergillus spp. Prevalence of L. interrogans was 4.9%, which was determined by identifying only serovars Pyrogenes, which accounted for 3.6%, and Tarassovi, which constituted 1.3%, with titers from 1:100 to 1:800. Additionally, T. cruzi antibodies were detected in 4.5% of the dogs. Skin lesions were found in 43% of the dogs (98/224), and 35 cultures were positive for Aspergillus spp. (35.7%, p leptospirosis and trypanosomiasis is not high in Southern Mexico compared with other tropical regions of Mexico, the presence of these zoonotic agents in the stray dog population demonstrates that the stray dog population in this region is a significant reservoir and potential source of infection in humans. Special care should be taken when handling stray dogs that exhibit skin lesions with partial alopecia, since a pathological Aspergillus sp. fungus may be present. PMID:19514808

  4. Neurotuberculosis in cattle in southern Brazil.

    Science.gov (United States)

    Konradt, Guilherme; Bassuino, Daniele Mariath; Bianchi, Matheus Viezzer; Bandinelli, Marcele Bettim; Driemeier, David; Pavarini, Saulo Petinatti

    2016-06-01

    Tuberculosis in cattle is a chronic infectious-contagious disease characterized by the development of nodular lesions (granulomas) in mainly the lungs and regional lymph nodes. It is caused by Mycobacterium tuberculosis complex, an acid-fast bacillus (AFB). Tuberculosis in the central nervous system is a rare condition in cattle. Herein, we describe the clinical and pathological findings of six neurotuberculosis cases in cattle diagnosed in Southern Brazil. The average age of the cattle affected was 12 months, and they varied in breed and sex. The clinical history ranged from 5 to 30 days and was characterized by motor incoordination, opisthotonus, blindness, and progression to recumbency. The cattle were euthanized, and grossly, the leptomeninges at the basilar brain showed marked and diffuse expansion, with nodular yellowish lesions ranging in size. On microscopic examination, there were multifocal granulomas located mainly in the meninges, though sometimes extending to adjacent neuropil or existing as isolated granulomas in neuropil. AFBs were observed in the cytoplasm of epithelioid macrophages and multinucleated giant cells through Ziehl-Neelsen histochemical staining and identified as Mycobacterium sp. through immunohistochemistry. PMID:27026233

  5. IFU spectroscopy of southern PNe: III

    CERN Document Server

    Ali, A; Basurah, H M; Amer, M A; Alsulami, R; Alruhaili, A

    2016-01-01

    In this paper we describe integral ?eld spectroscopic observations of four southern Galactic Planetary Nebulae (PNe), M3-4, M3-6, Hen2-29 and Hen2-37 covering the spectral range, 3400-7000?A.We derive the ionisation structure, the physical conditions, the chemical compositions and the kinematical characteristics of these PNe and ?nd good agreement with previous studies that relied upon the long-slit technique in their co-spatial area. From their chemical compositions as well as their spatial and kinematic characteristics, we determined that Hen2-29 is of the Peimbert Type I (He and N rich), while the other three are of Type II. The strength of the nebular He II line reveals that M3-3, Hen2-29 and Hen2-37 are of mid to high excitation classes while M3-6 is a low excitation planetary nebula (PN). A series of emission-line maps extracted from the data cubes were constructed for each PN to describe its overall structure. These show remarkable morphological diversity. Spatially resolved spectroscopy of M3-6, shows...

  6. Eclogite xenoliths from Wajrakarur kimberlites, southern India

    Science.gov (United States)

    Patel, S. C.; Ravi, S.; Thakur, S. S.; Rao, T. K.; Subbarao, K. V.

    2006-09-01

    Mineralogical characteristics of eclogite xenoliths from three kimberlite pipes (KL2, P2 and P10) of the Proterozoic Wajrakarur kimberlite field of southern India have been studied. In a rare sample of enstatite eclogite from the KL2 pipe garnet contains microscopic triangular arrays of needles or blebs of omphacite, enstatite and rutile consistent with an origin by exsolution parallel to the isometric form {111}. Discrete omphacite grains in the sample contain exsolved needles or blebs of enstatite and garnet. Kyanite eclogites are abundant in the KL2 pipe which occasionally show a secondary ring of pure celsian around kyanite grains. Omphacite Na2O contents in the eclogites of the KL2 and P2 pipes are typically between 3 and 6 wt%, and garnet has widely variable composition with end member ranges of Prp22-81Grs0-47Alm10-30Sps0-1Adr0-5Uv0-3. Eclogites of the P10 pipe comprise chromian omphacite and garnet. Phase relations in the ACF projection exhibit systematic increase of the Ca-Tschermak’s component in omphacite from enstatite eclogite through biminerallic eclogite to kyanite eclogite. Garnet-clinopyroxene Fe-Mg geothermometry yields temperatures mostly in the range of 900-1100 °C. A formerly supersilicic nature of garnet in enstatite eclogite as inferred from exsolution mineralogy indicates minimum peak pressure of 5 GPa.

  7. Milk production characteristics in Southern Brazil

    Directory of Open Access Journals (Sweden)

    Tony Picoli

    2015-07-01

    Full Text Available This paper aimed to describe milk production in Southern Rio Grande do Sul state, Brazil, and to identify factors that affect milk quality at this region. The average age of regional dairy farmers is 49, and 67.9% has not concluded elementary school. Dairy farming is carried out on properties with an average of 26.06 hectares and 8.4 lactating cows. Most of them (32.83% yield 50 to 100 L/day. Among the properties, 13.21% yield up to 30 L/day, and only 1.89% produces over 500 milk liters a day. Average yield was 6.8 L/day. Regarding to milking procedure, 39.3% farmers milk manually the animals, only 14.2% performed pre-milking teat disinfection, and 53.9% uses a single cloth to dry all animal teats. For infrastructure, 52.8% milks animals in wooden cowsheds. We observed that the average somatic cell count (SCC was within legal parameters, presenting negative correlation with milk production (r = -0.23 and lactose content (r = -0.39. However, the total bacterial count (TBC was above legal parameters. Education level seems to interfere in management and milk quality, because the less educated groups are, the less adequate are infrastructure, management, and product quality. Data show that there is a lower quality milk production where poor management techniques are adopted and owner education level affects milk quality.

  8. Alboran Basin, southern Spain - Part I: Geomorphology

    Energy Technology Data Exchange (ETDEWEB)

    Munoz, A. [Secretaria General de Pesca Maritima, Corazon de Maria, 8, 28002 Madrid (Spain); Ballesteros, M.; Rivera, J.; Acosta, J. [Instituto Espanol de Oceanografia, Corazon de Maria, 8, 28002 Madrid (Spain); Montoya, I. [Universidad Juan Carlos I, Campus de Mostoles, Madrid (Spain); Uchupi, E. [Woods Hole Oceanographic Institution, Woods Hole, MA 02543 (United States)

    2008-01-15

    Bathymetric, 3D relief and shaded relief maps created from multibeam echo-sounding data image the morphology of the Alboran Basin, a structural low along the east-west-trending Eurasian-African plates boundary. Topographic features in the basin are the consequence of volcanism associated with Miocene rifting, rift and post-rift sedimentation, and recent faulting resulting from the convergence of the African-Eurasian plates. Pleistiocene glacially induced regressions/transgressions when the sea level dropped to about 150 m below its present level gas seeps and bottom currents. Recent faulting and the Pleistocene transgressions/regressions led to mass-wasting, formation of turbidity currents and canyon erosion on the basin's slopes. Recent fault traces at the base of the northern basin slope have also served as passageways for thermogenic methane, the oxidation of which by bacteria led to the formation of carbonate mounds along the fault intercepts on the sea floor. Expulsion of thermogenic or biogenic gas has led to the formation of pockmarks; erosion by bottom currents has resulted in the formation of moats around seamounts and erosion of the seafloor of the Alboran Ridge and kept the southern edge of the 36 10'N high sediment free. (author)

  9. Intense look at Virgo Southern Extension

    CERN Document Server

    Karachentsev, Igor D

    2012-01-01

    We collected data on radial velocities and distances of galaxies to elucidate structure and kinematics of the filament attached to the Virgo cluster from south. In the region RA = [12.5 - 13.5]h, Dec = [-20 - 0]deg there are 171 galaxies with radial velocities VLG < 2000 km/s, and 98 of them have distance estimates. This galaxy cloud, called as "Virgo Southern Extension", is situated just on the edge of the Virgo "zero-velocity surface". The mean distance to Virgo SEx, 17pm2 Mpc, and the average radial velocity, 1172pm23 km/s, are very close to the Virgo cluster ones. In Supergalactic coordinates the Virgo SEx dimensions are 15x7x2 Mpc, where the major axis is directed along the line of sight, the second-major axis looks towards the Virgo core and the minor one is perpendicular to the Supergalactic plane. This flattened cloud consists of a dozen virialized groups with the total K-band luminosity of 1.7cdot10^12 Lsol and the total virial mass of 6.3cdot10^13 Msol, having a typical dark matter-to-stellar mat...

  10. Dendroclimatic reconstructions for the southern Colorado plateau

    Energy Technology Data Exchange (ETDEWEB)

    Dean, J.S.; Funkhouser, G.S. [Univ. of Arizona, Tucson, AZ (United States)

    1995-09-01

    A geographical network of climate sensitive tree-ring chronologies consisting of 25 archaeological sequences and two bristlecone pine series provides the basis for high resolution reconstructions of low and high frequency climatic variability on the southern Colorado Plateau over the last 1,500 years. Qualitative and quantitative dendroclimatic analyses of these data produce annual retrodictions of yearly and seasonal precipitation and summer Palmer Drought Severity Indices for each station and reconstructions of regional scale patterns in climatic variability. These reconstructions provide detailed information on climatic fluctuations that affected biotic and human populations as well as long-term baseline data for evaluating present-day climate and estimating future climatic trends. When integrated with other measures of past environmental variability, these reconstructions specify periods of favorable and unfavorable environmental conditions that would have affected past human populations of the region. The severest degradation, which occurred between A.D. 1250 and 1450, probably was causally related to numerous cultural changes that occurred at the end of the l3th century including the Anasazi abandonment of the Four Comers area. Projecting environmental patterns that characterized the last two millennia into the future indicates potential hazards to long term uranium mill waste disposal and containment and the potential and limitations of environmental restoration.

  11. Late glacial aridity in southern Rocky Mountains

    Energy Technology Data Exchange (ETDEWEB)

    Davis, O.K.; Pitblado, B.L. [Univ. of Arizona, Tucson, AZ (United States)

    1995-09-01

    While the slopes of the present-day Colorado Rocky Mountains are characterized by large stands of subalpine and montane conifers, the Rockies of the late glacial looked dramatically different. Specifically, pollen records suggest that during the late glacial, Artemisia and Gramineae predominated throughout the mountains of Colorado. At some point between 11,000 and 10,000 B.P., however, both Artemisia and grasses underwent a dramatic decline, which can be identified in virtually every pollen diagram produced for Colorado mountain sites, including Como Lake (Sangre de Cristo Mountains), Copley Lake and Splains; Gulch (near Crested Butte), Molas Lake (San Juan Mountains), and Redrock Lake (Boulder County). Moreover, the same pattern seems to hold for pollen spectra derived for areas adjacent to Colorado, including at sites in the Chuska Mountains of New Mexico and in eastern Wyoming. The implications of this consistent finding are compelling. The closest modem analogues to the Artemisia- and Gramineae-dominated late-glacial Colorado Rockies are found in the relatively arid northern Great Basin, which suggests that annual precipitation was much lower in the late-glacial southern Rocky Mountains than it was throughout the Holocene.

  12. CO survey of the Southern Coalsack

    Energy Technology Data Exchange (ETDEWEB)

    Nyman, L.A.; Bronfman, L.; Thaddeus, P.

    1988-01-01

    The authors have made a complete survey of CO J=1--0 emission from the Southern Coalsack with 8.8' resolution, sampled every 0.125 deg, and covering 26.5 square degrees. In some regions the /sup 13/CO J=1--0 line also was observed. A total mass of about 3500 solar masses was derived for the Coalsack. The CO emission has a very complex structure, with clumps and filaments and in places several velocity components. The agreement between optical extinction and the CO integrated intensity is very good, but in several cases the small, dense, dark globules in the Coalsack can not be distinguished in CO emission, implying that the CO lines become optically thick already in the gas surrounding the globules. The CO excitation temperature is typically between 8 and 11 K. In the regions of the /sup 13/CO observations a fairly high optical depth was derived, between 0.3 and 0.9, possibly with small enhancements toward globules. These CO data reveal no evidence for star formation in the Coalsack: the CO excitation temperature does not exceed 11.2 K anywhere, and in general, the lines are narrow.

  13. Bathymetry of southern Mauna Loa Volcano, Hawaii

    Science.gov (United States)

    Chadwick, William W.; Moore, James G.; Garcia, Michael O.; Fox, Christopher G.

    1993-01-01

    Manua Loa, the largest volcano on Earth, lies largely beneath the sea, and until recently only generalized bathymetry of this giant volcano was available. However, within the last two decades, the development of multibeam sonar and the improvement of satellite systems (Global Positioning System) have increased the availability of precise bathymetric mapping. This map combines topography of the subaerial southern part of the volcano with modern multibeam bathymetric data from the south submarine flank. The map includes the summit caldera of Mauna Loa Volcano and the entire length of the 100-km-long southwest rift zone that is marked by a much more pronounced ridge below sea level than above. The 60-km-long segment of the rift zone abruptly changes trend from southwest to south 30 km from the summit. It extends from this bend out to sea at the south cape of the island (Kalae) to 4 to 4.5 km depth where it impinges on the elongate west ridge of Apuupuu Seamount. The west submarine flank of the rift-zone ridge connects with the Kahuku fault on land and both are part of the ampitheater head of a major submarine landslide (Lipman and others, 1990; Moore and Clague, 1992). Two pre-Hawaiian volcanic seamounts in the map area, Apuupuu and Dana Seamounts, are apparently Cretaceous in age and are somewhat younger than the Cretaceous oceanic crust on which they are built.

  14. Prehistoric cultural ecology in southern jordan.

    Science.gov (United States)

    Henry, D O

    1994-07-15

    Research in the mountains of southern Jordan resulted in the discovery of 109 archaeological sites that are from the Lower Paleolithic to the Chalcolithic period [150 to 6 thousand years ago (ka)]. Beginning with the Middle Paleolithic (70 ka) two site types (long-term and ephemeral camps) are recognized. Long-term sites have larger areas, thicker deposits, higher artifact densities, and more abundant archaeological features than ephemeral sites. Their natural settings (elevation and exposure) and associated seasonal evidence (phytolith and cementum increment data) indicate that long-term sites were occupied during the winter, wet season and ephemeral sites during the warm, dry season. These differences in site use and seasonality likely reflect an adaptive strategy of transhumance that persisted to modern Bedouin times. At the end of the Pleistocene, the onset of warmer, drier conditions induced a shift of the long-term winter camps from relatively low (800 to 1000 meters above sea level) to high (1000 to 1250 meters above sea level) elevations and largely reversed the earlier transhumant pattern. PMID:17838033

  15. Probability seismic hazard maps of Southern Thailand

    Directory of Open Access Journals (Sweden)

    Chinda Sutiwanich

    2012-09-01

    Full Text Available Seismic hazard maps of southern Thailand were obtained from the integration of crustal fault, areal and subductionsource models using probability seismic hazard analysis and the application of a logic tree approach. The hazard maps showthe mean peak ground and spectral accelerations at 0.2, 0.3 and 1.0 second periods with a 10%, 5%, 2% and 0.5% probabilityof exceedance in 50-year hazard levels. The highest hazard areas were revealed to be in the Muang, Phanom, and Viphavadidistricts of Surat Thani province, the Thap Put district of Phang Nga province, and the Plai Phraya district of Krabi province.The lowest hazard areas are in the southernmost part of Thailand e.g. Yala, Pattani and Narathiwat provinces. The maximumvalues of the mean peak ground acceleration for the 475–9,975 yr return period are 0.28-0.52 g and the maximum spectralaccelerations at 0.2 seconds for the same return period are 0.52-0.80 g. Similar hazard is also obtained for different returnperiods. Presented seismic hazard maps are useful as a guideline for the future design of buildings, bridges or dams, for rocksites to resist earthquake forces.

  16. Pliocene and pleistocene volcanism in Southern Kyushu

    International Nuclear Information System (INIS)

    Southern Kyushu has been the site of intense volcanism at least since Pliocene time. One of the characteristics is the prevalence of large scale pyroclastic flow eruption, most of which originated from the volcano-tectonic depression now occupied by Kagoshima Bay. The deposits of these pyroclastic flows cover wide areas, serving as excellent stratigraphic marker horizons, but the radiometric age of the volcanic rocks in the area has been hardly available so far. A sample of Isaku pyroclastic flow was taken from an abandoned quarry. Ushine andesite, Fumoto pyroclastic flow, Ushine basalt and Ushine rhyolite were collected from a 300 m high cliff toward the top from the bottom. Kiyoura horn-blende andesite was collected from the southeastern foot of Yaeyama. K-Ar age was determined for these rocks. It was indicated that from 2 to 3 Ma (i.e., million years) ago, large scale pyroclastic eruption had taken place in the northern part of Kagoshima Bay, and extensive andesitic to basaltic volcanism occurred in both Ushine and Yaeyama areas. The establishment of the volcanic stratigraphy in the areas must await until more radiometric age determination becomes available. (Kako, I.)

  17. Wastewater effluent dispersal in Southern California Bays

    KAUST Repository

    Uchiyama, Yusuke

    2014-03-01

    The dispersal and dilution of urban wastewater effluents from offshore, subsurface outfalls is simulated with a comprehensive circulation model with downscaling in nested grid configurations for San Pedro and Santa Monica Bays in Southern California during Fall of 2006. The circulation is comprised of mean persistent currents, mesoscale and submesoscale eddies, and tides. Effluent volume inflow rates at Huntington Beach and Hyperion are specified, and both their present outfall locations and alternative nearshore diversion sites are assessed. The effluent tracer concentration fields are highly intermittent mainly due to eddy currents, and their probability distribution functions have long tails of high concentration. The dilution rate is controlled by submesoscale stirring and straining in tracer filaments. The dominant dispersal pattern is alongshore in both directions, approximately along isobaths, over distances of more than 10. km before dilution takes over. The current outfall locations mostly keep the effluent below the surface and away from the shore, as intended, but the nearshore diversions do not. © 2014 Elsevier Ltd.

  18. The genus Echium (Boraginaceae in southern Africa

    Directory of Open Access Journals (Sweden)

    E. Retief

    1998-12-01

    Full Text Available The genus Echium L. (Boraginaceae comprises about 60 species, mainly from Macaronesia. Europe, western Asia and North Africa. Two species E plantagineum L. and E. vulgare L. were introduced into southern Africa and have become naturalised. The species occur mainly as roadside weeds in the region. Echium is closely related to Lobostemon Lehm. (incl. Echiostachys Levyns, endemic in the southwestern Cape region. Pollen morphology shows a remarkable similarity between these genera, even suggesting that they could be merged. However, other characters, such as bilobed styles (Echium versus undivided ones (Lobostemon and the presence of an annulus, composed of a minute collar or 5-10 minute hairy lobules, at the bottom of the corolla tube inside (Echium, in contrast to hairs and/or scales at the base of the filaments (Lobostemon contradict the pollen structure, and Echium and Lobostemon are therefore regarded as two separate genera. Significant taxonomic characters, an identification key, full descriptions, illustrations and distribution maps of E. plantagineum and E. vulgare are given.

  19. Southern Regional Center for Lightweight Innovative Design

    Energy Technology Data Exchange (ETDEWEB)

    None

    2012-08-24

    The Southern Regional Center for Lightweight Innovative Design (SRCLID) has developed an experimentally validated cradle-to-grave modeling and simulation effort to optimize automotive components in order to decrease weight and cost, yet increase performance and safety in crash scenarios. In summary, the three major objectives of this project are accomplished: To develop experimentally validated cradle-to-grave modeling and simulation tools to optimize automotive and truck components for lightweighting materials (aluminum, steel, and Mg alloys and polymer-based composites) with consideration of uncertainty to decrease weight and cost, yet increase the performance and safety in impact scenarios; To develop multiscale computational models that quantify microstructure-property relations by evaluating various length scales, from the atomic through component levels, for each step of the manufacturing process for vehicles; and To develop an integrated K-12 educational program to educate students on lightweighting designs and impact scenarios. In this final report, we divided the content into two parts: the first part contains the development of building blocks for the project, including materials and process models, process-structure-property (PSP) relationship, and experimental validation capabilities; the second part presents the demonstration task for Mg front-end work associated with USAMP projects.

  20. The buffalo in Southern South America

    Directory of Open Access Journals (Sweden)

    M. Zava

    2010-02-01

    Full Text Available The number of buffaloes in the American continent is growing at the explosive rate of 12.7 % a year, well above all other continents. Within this context the different situations of the southern part of South America are described, those countries that two hundred years ago were part of the River Plate Viceroyship and the Chile General Command, both of them part of the Spanish empire. The first steps of buffaloes in Paraguay, Bolivia and Uruguay. The expansion of buffaloes in Argentina and their recent start up in Chile. The production systems in the region are described, principally Argentina and Paraguay. The major changes and expansion of agriculture in Argentina are displacing cattle production from the North towards the Tropics, where buffalo has proven to be very superior in productivity compared to cattle production thanks to its very good adaptation to the local conditions. In Paraguay, a totally subtropical country, something very similar is happening. Paraguay has consolidated its sales of buffalo hides and beef. Argentina is well on its way to having a very efficient buffalo beef marketing competing with cattle of the highest quality. Buffalo milk production is still not mature in these countries, although there are several projects underway in Uruguay, Bolivia and Argentina.

  1. The Mopra Southern Galactic Plane CO Survey

    CERN Document Server

    Burton, Michael; Glueck, Christian; Goldsmith, Paul; Hawkes, Jarryd; Hollenbach, David; Kulesa, Craig; Martin, Chris; Pineda, Jorge; Rowell, Gavin; Simon, Robert; Stark, Tony; Stutzki, Juergen; Tothill, Nick; Urquhart, James; Walker, Chris; Walsh, Andrew; Wolfire, Mark

    2013-01-01

    We present the first results from a new carbon monoxide (CO) survey of the southern Galactic plane being conducted with the Mopra radio telescope in Australia. The 12CO, 13CO and C18O J=1-0 lines are being mapped over the l = 305-345 deg, b = +/- 0.5 deg portion of the 4th quadrant of the Galaxy, at 35" spatial and 0.1 km/s spectral resolution. The survey is being undertaken with two principal science objectives: (i) to determine where and how molecular clouds are forming in the Galaxy and (ii) to probe the connection between molecular clouds and the "missing" gas inferred from gamma-ray observations. We describe the motivation for the survey, the instrumentation and observing techniques being applied, and the data reduction and analysis methodology. In this paper we present the data from the first degree surveyed, l = 323-324 deg, b = +/- 0.5 deg. We compare the data to the previous CO survey of this region and present metrics quantifying the performance being achieved; the rms sensitivity per 0.1 km/s veloc...

  2. Photosynthetically active sunlight at high southern latitudes.

    Science.gov (United States)

    Frederick, John E; Liao, Yixiang

    2005-01-01

    A network of scanning spectroradiometers has acquired a multiyear database of visible solar irradiance, covering wavelengths from 400 to 600 nm, at four sites in the high-latitude Southern Hemisphere, from 55 degrees S to 90 degrees S. Monthly irradiations computed from the hourly measurements reveal the character of the seasonal cycle and illustrate the role of cloudiness as functions of latitude. Near summer solstice, the combined influences of solar elevation and the duration of daylight would produce a monthly irradiation with little latitude dependence under clear skies. However, the attenuation associated with local cloudiness varies geographically, with the greatest effect at the most northern locations, Ushuaia, Argentina and Palmer Station on the Antarctic Peninsula. Near summer solstice, the South Pole experiences the largest monthly irradiation of the sites studied, where relatively clear skies contribute to this result. Scaling factors derived from radiative-transfer calculations combined with the measured 400-600 nm irradiances allow estimating irradiances integrated over the wavelength band 400-700 nm. This produces a climatology of photosynthetically active radiation for each month of the year at each site. PMID:15689179

  3. Radio detections of southern ultracool dwarfs

    CERN Document Server

    Lynch, C; Ravi, V; Hobbs, G; Lo, K; Ward, C

    2016-01-01

    We report the results of a volume-limited survey using the Australia Telescope Compact Array to search for transient and quiescent radio emission from 15 southern hemisphere ultracool dwarfs. We detect radio emission from 2MASSW J0004348-404405 increasing the number of radio loud ultracool dwarfs to 22. We also observe radio emission from 2MASS J10481463-3956062 and 2MASSI J0339352-352544, two sources with previous radio detections. The radio emission from the three detected sources shows no variability or flare emission. Modelling this quiescent emission we find that it is consistent with optically thin gyrosynchrotron emission from a magnetosphere with an emitting region radius of (1 - 2)$R_*$, magnetic field inclination 20$^{\\circ}$ - 80$^{\\circ}$, field strength $\\sim$10 - 200 G, and power-law electron density $\\sim$10$^4$ - 10$^8$ cm$^{-3}$. Additionally, we place upper limits on four ultracool dwarfs with no previous radio observations. This increases the number of ultracool dwarfs studied at radio freq...

  4. Planned Parenthood of Southern Arizona v. Lawall.

    Science.gov (United States)

    1999-01-01

    Court Decision: 180 Federal Reporter, 3d Series 1022; 1999 June 9 (date of decision). The Ninth Circuit Court of Appeals held that an Arizona law requiring a minor to have parental consent for abortion was unconstitutional. Planned Parenthood of Southern Arizona had brought an action challenging the validity of the law, which contained a judicial bypass provision allowing minors to obtain an abortion in the absence of parental consent if approved by the court. Because the judicial bypass provision was open-ended and did not contain specific time frames or deadlines, it did not assure an expeditious alternative to parental consent. The Ninth Circuit found that the judicial bypass provision posed a substantial obstacle to abortion in a large fraction of cases and therefore unduly burdened a woman's right to an abortion. The Arizona statute also contained a medical emergency provision which allowed minors to avoid parental consent if an attending physician deemed an abortion medically necessary to the health and bodily function of the minor. Because the medical emergency provision relied on deadlines provided by the judicial bypass provision, and because the judicial bypass provision failed to specify deadlines in a manner that could be useful to physicians in making their decision concerning whether an abortion is medically necessary, the Ninth Circuit found the medical emergency provision unconstitutionally vague. The Ninth Circuit affirmed the District Court's decision by permanently enjoining the State from implementing or enforcing the statute. PMID:16477716

  5. Helminths of the ocelot from southern Texas.

    Science.gov (United States)

    Pence, Danny B; Tewes, Michael E; Laack, Linda L

    2003-07-01

    In the USA, the ocelot (Leopardus pardalis) is a highly endangered felid found only in a few remaining vestiges of native thornshrub brushland in the Lower Rio Grande Valley (LRGV) of extreme southern Texas. From 1987-1998, carcasses of 15 adult ocelots that died of vehicular accidents or natural causes were examined for helminths. All cats had 1-8 (mean = 3) helminth species. All were infected with 1-101 (mean +/- SE = 32 +/- 7) Toxascaris leonina. Other helminths from these ocelots were Alaria marcianae, Brachylaima sp., Mesocestoides lineatus, Taenia rileyi, Oncicola canis, Dirofilaria immitis, Physaloptera rara, Ancylostoma tubaeformae, Cylicospirura chevreuxi, Vogeloides felis, and Metathelazia californica. Additionally, two cats had scarring of the aorta with lesions typical of those caused by Spriocerca lupi, although larval nematodes were not seen. A clinal variation in size of nearly three orders of magnitude was noted in the diplostomatid trematodes in the small intestine of one adult male ocelot. Despite the differences in size, all specimens appeared morphologically identical and were regarded as A. marcianae. Helminth prevalences and abundances, including those of potentially pathogenic species like D. immitis, were low. Although a single heartworm infection may have contributed to the death of one ocelot, helminth infections in general seemed to be of no great consequence to this endangered ocelot population. The helminth fauna of ocelots in the LRGV is reflective of that from wild felids in general; all have been reported previously from the bobcat (Lynx rufus) and mountain lion (Puma concolor) elsewhere in Texas. PMID:14567231

  6. The Southern Universities Nuclear Institute in retrospect

    International Nuclear Information System (INIS)

    A review is given on the history, management and activities of the Southern Universities Nuclear Institute (SUNI). SUNI was originally established to enable scientists and students of the universities of Stellenbosch and Cape Town to undertake fundamental research in nuclear physics and chemistry. On 1 April 1983 SUNI was integrated with the National Accelerator Centre. Now the Van de Graaff accelerator is also used in basic research. SUNI's research activities in nuclear physics includes: level-structure studies using the inelastic scattering of neutrons; study of nucleon-nucleon interactions; study of related nuclear levels (analogues); study of compound nuclei; fluctuation phenomena in reactions going via the compound state; studies of nuclear level parameters using charged particle induced reactions and physics of the fissionable nuclei. Research in atomic physics includes: inner shell excitation and outer shell excitation. Research is also done in the fields of nuclear analytical chemistry, solid state and materials science, medical and life sciences and the applications of nuclear technology in industry and the environment

  7. Mechanization in firewood harvesting in southern Italy

    Directory of Open Access Journals (Sweden)

    2005-01-01

    Full Text Available The aim of this research was to survey current mechanization level of coppice harvesting in Southern Italy. The cooperation of the General Direction of the National Forest Service (NFS has been a basic tool of survey. A questionnaire compiled on purpose was sent to each Forest Station (hereinafter referred to as CS in the following regions: Basilicata, Campania and Calabria. A high percentage (80% of the CSs did fulfill the questionnaire. The answers highlight that: i the main assortment currently produced is firewood; ii the level of harvesting mechanization is rather low, equipment being quite obsolete: indeed, the most widely used machineries are farm tractors partly adapted to forest harvesting and equipped with cages or back winch; iii the use of animals for hauling (mules and oxen, the latter in Calabria is still quite frequent, while forest tractors, polyethylene chutes and cable cranes are almost absent; iv the use of individual protection (DPI and machinery protection devices (DPM is on average quite low.

  8. Southern Meridional Atmospheric Circulation Associated with IOD

    Institute of Scientific and Technical Information of China (English)

    LIU Na; CHEN Hongxia

    2006-01-01

    Using the monthly wind and sea surface temperature (SST) data, southern meridional atmospheric circulation cells associated with the Indian Ocean Dipole Mode (IOD) events in the Indian Ocean are for the first time described and examined. The divergent wind and pressure vertical velocity are employed for the identification of atmospheric circulation cells. During the four different phases of the positive IOD events, the anomalous meridional Hadley circulation over the western Indian Ocean shows that the air rises in the tropics, flows poleward in the upper troposphere, sinks in the subtropics, and returns back to the tropics in the lower troposphere. The anomalous Hadley circulation over the eastern Indian Ocean is opposite to that over the western Indian Ocean. During positive IOD events, the meridional Hadley circulation over the eastern Indian Ocean is weakened while it is strengthened over the western Indian Ocean. Correlation analysis between the IOD index and the indices of the Hadley cells also proves that, the atmospheric circulation patterns are evident in every IOD event over the period of record.

  9. A Southern Ocean mode of multidecadal variability

    Science.gov (United States)

    Le Bars, D.; Viebahn, J. P.; Dijkstra, H. A.

    2016-03-01

    A 250 year simulation of a strongly eddying global version of the Parallel Ocean Program (POP) model reveals a new mode of intrinsic multidecadal variability, the Southern Ocean Mode (SOM), with a period of 40-50 year. The peak-to-peak difference in the global ocean heat content within a multidecadal cycle is up to 60 ZJ. This change results from surface heat flux variations in the South Atlantic and propagation of temperature anomalies along the Antarctic Circumpolar Current and into the Weddell gyre around 30°E. The temperature anomalies propagate as deep as 5000 m along the isopycnals between 50°S and 30°S and induce multidecadal changes in the Atlantic Meridional Overturning Circulation. A positive feedback loop between the generation of eddies through baroclinic instability and the dynamics of the mean circulation is essential for the existence of the SOM. The dominant physics appears similar to that responsible for variability found in a three-layer quasi-geostrophic eddy-resolving model. This combined with the fact that the SOM is not found in a noneddying version of the same global POP model further suggests that eddy processes are crucial for its existence and/or excitation.

  10. Neonatal screening for hypothyroidism in southern Thailand

    International Nuclear Information System (INIS)

    Thyroid stimulating hormone (TSH) determination by radioimmunoassay of dried blood spots was selected as the screening method for congenital hypothyroidism in southern Thailand. Blood from infant's heel was obtained from 7814 new-born children in the fifth day of life. Infants with TSH values greater than 25 mU/L were recalled for a more careful clinical examination and their thyroxine (T4) and TSH re-estimated. Fifty-four infants with TSH values between 25 and 50 mU/L were found to be normal upon re-evaluation. These are still being observed over a longer term for full confirmation. Two infants with values above 50 mU/L, although clinically euthyroid, were found to be hypothyroid according to levels of triiodothyronine (T3) and T4, thyroid scintigraphy and roentgenographic assessment of bone age. Replacement therapy has been started. It is shown that a screening programme for neonatal hypothyroidism is feasible, probably worth while and perhaps even cost effective. (author)

  11. Holocene geologic slip rate for the Banning strand of the southern San Andreas Fault, southern California

    Science.gov (United States)

    Gold, Peter O.; Behr, Whitney M.; Rood, Dylan; Sharp, Warren D.; Rockwell, Thomas; Kendrick, Katherine J.; Salin, Aaron

    2015-01-01

    Northwest directed slip from the southern San Andreas Fault is transferred to the Mission Creek, Banning, and Garnet Hill fault strands in the northwestern Coachella Valley. How slip is partitioned between these three faults is critical to southern California seismic hazard estimates but is poorly understood. In this paper, we report the first slip rate measured for the Banning fault strand. We constrain the depositional age of an alluvial fan offset 25 ± 5 m from its source by the Banning strand to between 5.1 ± 0.4 ka (95% confidence interval (CI)) and 6.4 + 3.7/−2.1 ka (95% CI) using U-series dating of pedogenic carbonate clast coatings and 10Be cosmogenic nuclide exposure dating of surface clasts. We calculate a Holocene geologic slip rate for the Banning strand of 3.9 + 2.3/−1.6 mm/yr (median, 95% CI) to 4.9 + 1.0/−0.9 mm/yr (median, 95% CI). This rate represents only 25–35% of the total slip accommodated by this section of the southern San Andreas Fault, suggesting a model in which slip is less concentrated on the Banning strand than previously thought. In rejecting the possibility that the Banning strand is the dominant structure, our results highlight an even greater need for slip rate and paleoseismic measurements along faults in the northwestern Coachella Valley in order to test the validity of current earthquake hazard models. In addition, our comparison of ages measured with U-series and 10Be exposure dating demonstrates the importance of using multiple geochronometers when estimating the depositional age of alluvial landforms.

  12. The new southern novel: a bibliographical assay The new southern novel: a bibliographical assay

    OpenAIRE

    Robert F. Kiernan

    2008-01-01

    Any attempt to chronicle the contemporary southern novel is beset by troublesome, interlocking questions. Is the very existence of the genro presumptive? If not, does its tradition continue to instill a sectional awareness among writers flourishing in the last years of the twentieth century? If so, is it not the case that to read any literary text as a mimetic expression of a geographical region is to confine each to the other and to ignore the quiddity of both? no task of the chronicler...

  13. GENETIC DIVERSITY WITHIN THE SOUTHERN PLAINS WOODRAT (NEOTOMA MICROPUS) IN SOUTHERN TEXAS

    OpenAIRE

    Méndez-Harclerode, Francisca M.; HANSON, J. DELTON; Fulhorst, Charles F.; Milazzo, Mary L.; Ruthven, Donald C.; Bradley, Robert D.

    2005-01-01

    Genetic diversity within a population of the southern plains woodrat was examined using DNA sequences (967 base pairs [bp]) obtained from the control or d-loop region of the mitochondrial genome. One hundred fourteen individuals from 10 collection sites were assigned to 42 haplotypes. Haplotype diversity values were moderate to high (0.974 overall and ranged from 0.524 to 0.964 across collecting sites), whereas nucleotide diversity values were low (0.008 overall and ranged from 0.001 to 0.010...

  14. Taxonomy of the genus Scotophilus (Vespertilionidae) in southern Africa

    Czech Academy of Sciences Publication Activity Database

    Vallo, Peter; Benda, P.; Jacobs, D. J.

    Kwaluseni: University of Swaziland, 2011. s. 33-34. [African Small Mammal Symposium /11./. 03.08.2011-08.08.2011, Kwaluseni] Institutional research plan: CEZ:AV0Z60930519 Keywords : bats * Southern Africa Subject RIV: EG - Zoology

  15. Ager Falernus (southern Italy: interventions for preserving the Falciano lake

    Directory of Open Access Journals (Sweden)

    Cirillo C

    2006-01-01

    Full Text Available Some interventions are described for the restoration of Falciano lake, Agro Falerno, Southern Italy, which is a site of interest for its naturalistic value and the persistence of important traces from Roman times.

  16. Southern African species of Mentha L. (Lamiaceae)

    OpenAIRE

    L. E. Codd

    1983-01-01

    The species of Mentha L. occurring in Southern Africa are reviewed and a key is provided to two indigenous and one naturalized species.  M. wissii Launert is reduced to M. longifolia (L.) Huds. subsp. wissii (Launert) Codd.

  17. Final critical habitat for Southern Clubshell (Pleurobema decisum)

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — This Polygon shapefile of critical habitat for the Southern Clubshell (Pleurobema decisum) based on the description provided in the Federal Register.

  18. Southern Monterey Bay Littoral Cell CRSMP Proposed Receiver Site 2008

    Data.gov (United States)

    California Department of Resources — Given the location of the critical areas of erosion and the need to avoid adverse impacts to local sensitive habitat, the Southern Monterey Bay Coastal RSM Plan...

  19. Fire Perimeters - Southern California, Fall 2007 [ds385

    Data.gov (United States)

    California Department of Resources — Southern Callifornia fire perimeters for the Fall 2007 wildfires. The perimeters were assembled from various sources by California Department of Fish and Game (DFG)...

  20. Final Critical Habitat for Southern Resident Killer Whales

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — A geospatial data set depicting the boundaries of marine areas designated as critical habitat under the Endangered Species Act (ESA) for Southern Resident killer...

  1. Three new species of Cladonia (Cladoniaceae, Ascomycota from Southern Brazil

    Directory of Open Access Journals (Sweden)

    ANA M. CHARNEI

    2015-03-01

    Full Text Available Cladonia maculata, C. paranaensis and C. quiririensisare described as new to science. These species were found between the altitudes of 900 to 1887 meters on the Serra do Mar Mountain in Southern Brazil.

  2. Southern States Lagging in Tough Smoking Bans, CDC Says

    Science.gov (United States)

    ... 159529.html Southern States Lagging in Tough Smoking Bans, CDC Says Only 6 in 10 Americans covered ... federal government report says. This type of law bans smoking in all indoor areas of workplaces, restaurants ...

  3. Final critical habitat for Southern Acornshell (Epioblasma othcaloogensis)

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — This Polygon shapefile of critical habitat for the Southern Acornshell (Epioblasma othcaloogensis) based on the description provided in the Federal Register.

  4. Southern Monterey Bay Littoral Cell CRSMP Sensitive Habitat 2008

    Data.gov (United States)

    California Department of Resources — One of the most important functions of the southern Monterey Bay coastal system is its role as a habitat for a unique flora and fauna. The beaches are habitat for...

  5. Developmental transformation and peace consolidation in southern Sudan

    Directory of Open Access Journals (Sweden)

    Jeni Klugman

    2005-11-01

    Full Text Available Building the capacity of the Government of SouthernSudan (GoSS is the latest challenge in the transformation of the Sudan People’s Liberation Movement (SPLM from rebel movement to governing partner.

  6. Research Ship Southern Surveyor Underway Meteorological Data, Quality Controlled

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Research Ship Southern Surveyor Underway Meteorological Data (delayed ~10 days for quality control) are from the Shipboard Automated Meteorological and...

  7. Southern Great Plains rapid ecoregional assessment : Pre-assessment report

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — The purpose of the Pre-Assessment Report for the Southern Great Plains Rapid Ecoregional Assessment (REA) is to document the selection process for and final list of...

  8. Killer Whale Genetic Data - Southern resident killer whale pedigree analysis

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — In this project, we are using genetic variation to infer mating patterns in the southern killer whale community. In Canada, this population was listed as threatened...

  9. Final critical habitat for Southern Pigtoe (Pleurobema georgianum)

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — This Polygon shapefile of critical habitat for the Southern Pigtoe (Pleurobema georgianum) based on the description provided in the Federal Register.

  10. Climate Prediction Center Equatorial Southern Oscillation Index (1949-present)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This is one of the CPC?s Monthly Atmospheric and SST Indices. It contains Equatorial Southern Oscillation Index (standardized sea level pressure differences between...

  11. High HIV Rates for Gay Men in Some Southern Cities

    Science.gov (United States)

    ... news/fullstory_158914.html High HIV Rates for Gay Men in Some Southern Cities In Jackson, Miss., ... 2016 (HealthDay News) -- Rates of HIV infection among gay and bisexual men are approaching 30 percent to ...

  12. The conundrum of conservation agriculture and livelihoods in Southern Africa

    NARCIS (Netherlands)

    Nkala, P.; Mango, N.; Corbeels, M.; Veldwisch, G.J.A.; Huising, J.

    2011-01-01

    Low crop productivity, food insecurity, hunger and malnutrition; inadequate farming knowledge and skills, implements and inputs are characteristic of smallholder agriculture in Southern Africa. Many researchers argue that conservation agriculture can guarantee higher crop productivity, food security

  13. Southern Sierra Fisher Conservation Area - Sierra Nevada [ds568

    Data.gov (United States)

    California Department of Resources — The Southern Sierra Fisher Conservation Area encompasses the known occupied range of the Pacific fisher in the Sierra Nevada. This consists of an elevational band...

  14. Avian botulism in the southern San Joaquin valley 1970

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — A joint effort of the Department of Fish and' Game and the U. S. Bureau of Sport Fisheries and Wildlife contained botulism losses in the southern San Joaquin Valley...

  15. Vestalaria vinnula spec. nov. from southern Vietnam (Odonata: Calopterygidae)

    NARCIS (Netherlands)

    Hämäläinen, M.

    2006-01-01

    Vestalaria vinnula spec.nov. (holotype male, southern Vietnam, Lam Dong province, Blao, 1962) is described in both sexes and compared with other species of Vestalaria May, 1935 (= the Vestalis smaragdina - group), which is ranked as valid genus.

  16. Phytoplankton composition and biomass across the southern Indian Ocean

    DEFF Research Database (Denmark)

    Schlüter, Louise; Henriksen, Peter; Nielsen, Torkel Gissel;

    2011-01-01

    Phytoplankton composition and biomass was investigated across the southern Indian Ocean. Phytoplankton composition was determined from pigment analysis with subsequent calculations of group contributions to total chlorophyll a (Chl a) using CHEMTAX and, in addition, by examination in the microscope...

  17. Sustainable neighbourhood development: missed opportunities in Southern California

    OpenAIRE

    Ajay Garde; Jean-Daniel Saphores; Richard Matthew; Kristen Day

    2010-01-01

    We examine the diffusion of sustainable planning and design concepts into neighbourhood development projects, based on findings of a survey of planners in all 180 cities of five Southern California counties. Sustainable neighbourhood development has particular significance in Southern California owing to the regions’s rapid growth. We compare ‘typical’ and ‘innovative’ neighbourhood developments to determine whether sustainable planning and design concepts are being incorporated in these proj...

  18. Hydrothermal system in Southern Grass Valley, Pershing County, Nevada

    Energy Technology Data Exchange (ETDEWEB)

    Welch, A.H.; Sorey, M.L.; Olmsted, F.H.

    1981-01-01

    Southern Grass Valley is a fairly typical extensional basin in the Basin and Range province. Leach Hot Springs, in the southern part of the valley, represents the discharge end of an active hydrothermal flow system with an estimated deep aquifer temperature of 163 to 176/sup 0/C. Results of geologic, hydrologic, geophysical and geochemical investigations are discussed in an attempt to construct an internally consistent model of the system.

  19. A synopsis of Peristrophe (Acanthaceae in southern Africa

    Directory of Open Access Journals (Sweden)

    K. Balkwill

    1996-12-01

    Full Text Available A synopsis of Peristrophe Nees (Acanthaceae in southern Africa is provided. Peristrophe comprises nine species, one with two subspecies in southern Africa. A key for identification and descriptions of species not included in recent literature are provided. Morphology of tertiary bracts,indumentum on stems and distribution is illustrated and diagnostic characters, distribution, habitat, flowering  time and conservation status are discussed for each species.

  20. Evidence of Incipient Forest Transition in Southern Mexico

    OpenAIRE

    Vaca, Raúl Abel; Golicher, Duncan John; Cayuela, Luis; Hewson, Jenny; Steininger, Marc

    2012-01-01

    Case studies of land use change have suggested that deforestation across Southern Mexico is accelerating. However, forest transition theory predicts that trajectories of change can be modified by economic factors, leading to spatial and temporal heterogeneity in rates of change that may take the form of the Environmental Kuznets Curve (EKC). This study aimed to assess the evidence regarding potential forest transition in Southern Mexico by classifying regional forest cover change using Landsa...

  1. Politics and water policy: A Southern Africa example

    OpenAIRE

    Nicol, A; Mtisi, S.

    2003-01-01

    Drawing on fieldwork from the Sustainable Livelihoods in Southern Africa programme - largely undertaken in Zimbabwe, with some additional material from South Africa and Mozambique - this article examines the politics surrounding water resources and policy change in southern Africa. It outlines the policy contexts of water reforms in the three countries. The article then investigates: the process of institution-building accompanying water policy reform and resulting complex and politicised ins...

  2. Regional integration, FDI and competitiveness in Southern Africa

    OpenAIRE

    Goldstein, Andrea E.

    2015-01-01

    Southern Africa, with its vast natural resources and relatively skilled workforce, should be a magnet for foreign direct investment (FDI). This, however, is not the case. Indeed, even domestic investment is low, though intra-regional investment, mainly from South Africa and Mauritius is notable. This book analyses investment flows within the region and examines the role ofFDI in key industries. It concludes that Southern Africa still has to shake off a reputation for instability and high risk...

  3. Mercury Exposure among Garbage Workers in Southern Thailand

    OpenAIRE

    Decharat, Somsiri

    2012-01-01

    Objectives 1) To determine mercury levels in urine samples from garbage workers in Southern Thailand, and 2) to describe the association between work characteristics, work positions, behavioral factors, and acute symptoms; and levels of mercury in urine samples. Methods A case-control study was conducted by interviewing 60 workers in 5 hazardous-waste-management factories, and 60 matched non-exposed persons living in the same area of Southern Thailand. Urine samples were collected to determin...

  4. Ocular health practices by dental surgeons in Southern Nigeria

    OpenAIRE

    Azodo, Clement Chinedu; Ezeja, Ejike B

    2014-01-01

    Background Dental professionals are among the occupational groups that experience ocular injuries and problems as they perform their daily dental works. The purpose of the study was to determine the ocular health practices by dental surgeons in Southern Nigeria. Methods This cross-sectional study was conducted on dental surgeons working in Southern Nigerian tertiary oral healthcare centers using self-developed validated questionnaire as the tool of data collection. Results Of the 148 responde...

  5. Rabbits as a keystone species in southern Europe

    OpenAIRE

    Delibes Mateos, Miguel; Redpath, Steve M.; Angulo, Elena; Ferreras, Pablo; Villafuerte, Rafael

    2007-01-01

    A keystone species is one that is crucial in maintaining the organization and diversity of their ecological communities. We tested the idea that rabbits act as a keystone species in southern Europe by exploring relationships between rabbit abundance and the abundance and diversity of raptor species. At 20 sites in southern Spain we assessed rabbit abundance through counts of animals along transects and assessed the number of raptor individuals and species through watches from vantage poin...

  6. Developing sustainable conservation agriculture for smallholder farmers in Southern Africa

    OpenAIRE

    Eash, Neal S.; Walker, Forbes; Thierfelder, Christian; Marake, Makoala V.; Wilcox, M; Lambert, D; Basson, A.

    2012-01-01

    Metadata only record This presentation was given at the Soil Science Society of America annual meeting on October 22nd, 2012 in Cincinnati, Ohio at 11:10 in the morning. Conservation agricultural practices were used in Southern Africa's cropping system to improve soil nutrient, improve food security, sequester carbon, and mitigate green house gases. LTRA-9 (Developing sustainable CAPS for smallholder farmers in Southern Africa)

  7. Socio-economic analysis of conservation agriculture in southern Africa

    OpenAIRE

    Food and Agriculture Organization of the United Nations.‏ United Nations Development Programme

    2011-01-01

    Southern Africa, a region little affected by the Green Revolution and likely to suffer severe detrimental impacts from climate change, faces pervasive poverty, hunger, and environmental degradation. Conservation agriculture may be a sustainable and effective way to resolve these issues, but stakeholders need accessible and solid evidence of its effectiveness. The purpose of this report is to analyze the impact of CA on the Southern Africans countries of South Africa, Zambia, and Zimbabwe thro...

  8. A taxonomic revision of Boerhavia (Nyctaginaceae) in southern Africa

    OpenAIRE

    M. Struwig; S.J. Siebert

    2013-01-01

    The genus Boerhavia in southern Africa is revised. Eight species and one infraspecific taxon are recognized for the Flora of Southern Africa region, with Boerhavia orbicularifolia Struwig described as new. Four of the species are indigenous, with three endemic to semi-arid parts of Namibia and north-western South Africa. The eight species can be distinguished from one another by the shape and indumentum of the anthocarp. The majority of taxa have no edaphic preferences but Boerhav...

  9. The magnitude distribution of earthquakes near Southern California faults

    OpenAIRE

    Alderson, D; Doyle, J; Page, M.T.

    2011-01-01

    We investigate seismicity near faults in the Southern California Earthquake Center Community Fault Model. We search for anomalously large events that might be signs of a characteristic earthquake distribution. We find that seismicity near major fault zones in Southern California is well modeled by a Gutenberg-Richter distribution, with no evidence of characteristic earthquakes within the resolution limits of the modern instrumental catalog. However, the b value of the locally observed magnitu...

  10. Twentieth Century Winter Changes in Southern Hemisphere Synoptic Weather Modes

    OpenAIRE

    Carsten S. Frederiksen; Frederiksen, Jorgen S.

    2011-01-01

    During the last sixty years, there have been large changes in the southern hemisphere winter circulation and reductions in rainfall particularly in the southern Australian region. Here we examine the corresponding changes in dynamical modes of variability ranging from storm tracks, onset-of-blocking modes, northwest cloud-band disturbances, Antarctic low-frequency modes, intraseasonal oscillations, and African easterly waves. Our study is performed using a global two-level primitive equation ...

  11. Labiatae checklist for Andalusia (Southern Spain) and Rif (Northern Morocco)

    OpenAIRE

    Navarro, Teresa; el Oualidi, Jalal; Cabezudo, Baltasar; Fennane, Mohamed

    2002-01-01

    . Labiatae checklist for Andalusia (Southern Spain) and the Rif (Northern Morocco). The taxa of Labiatae from Andalusia (Southern Iberian Peninsula) and the Rif (Northern Morocco) are included in a checklist, which has about 262 taxa, belonging to 28 genera and 5 subfamilies, representing almost 25% of total Mediterranean Labiatae taxa and c. 70% of total strict Labiatae Mediterranean genera. Nepetoideae with 17 genera is the richest subfamily; Ajugoideae (Ajuga genus), Teucrioideae (Teucrium...

  12. 76 FR 66054 - Southern Natural Gas Company, L.L.C.; Notice of Application

    Science.gov (United States)

    2011-10-25

    ... Energy Regulatory Commission Southern Natural Gas Company, L.L.C.; Notice of Application Take notice that on October 7, 2011, Southern Natural Gas Company, L.L.C. (Southern), 569 Brookwood Village, Suite 501... application should be directed to Glenn A. Sheffield, Director--Rates and Regulatory, Southern Natural...

  13. Characteristics of cyclone climatology and variability in the Southern Ocean

    Institute of Scientific and Technical Information of China (English)

    WEI Lixin; QIN Ting

    2016-01-01

    A new climatology of cyclones in the Southern Ocean is generated by applying an automated cyclone detection and tracking algorithm (developed by Hodges at the Reading University) for an improved and relatively high-resolution European Centre for Medium-Range Weather Forecasts atmospheric reanalysis during 1979–2013. A validation shows that identified cyclone tracks are in good agreement with a available analyzed cyclone product. The climatological characteristics of the Southern Ocean cyclones are then analyzed, including track, number, density, intensity, deepening rate and explosive events. An analysis shows that the number of cyclones in the Southern Ocean has increased for 1979–2013, but only statistically significant in summer. Coincident with the circumpolar trough, a single high-density band of cyclones is observed in 55°–67°S, and cyclone density has generally increased in north of this band for 1979–2013, except summer. The intensity of up to 70% cyclones in the Southern Ocean is less than 980 hPa, and only a few cyclones with pressure less than 920 hPa are detected for 1979–2013. Further analysis shows that a high frequency of explosive cyclones is located in the band of 45°–55°S, and the Atlantic Ocean sector has much higher frequent occurrence of the explosive cyclones than that in the Pacific Ocean sector. Additionally, the relationship between cyclone activities in the Southern Ocean and the Southern Annular Mode is discussed.

  14. Southern Hemisphere rainfall variability over the past 200 years

    Science.gov (United States)

    Gergis, Joëlle; Henley, Benjamin J.

    2016-05-01

    This study presents an analysis of three palaeoclimate rainfall reconstructions from the Southern Hemisphere regions of south-eastern Australia (SEA), southern South Africa (SAF) and southern South America (SSA). We provide a first comparison of rainfall variations in these three regions over the past two centuries, with a focus on identifying synchronous wet and dry periods. Despite the uncertainties associated with the spatial and temporal limitations of the rainfall reconstructions, we find evidence of dynamically-forced climate influences. An investigation of the twentieth century relationship between regional rainfall and the large-scale climate circulation features of the Pacific, Indian and Southern Ocean regions revealed that Indo-Pacific variations of the El Niño-Southern Oscillation (ENSO) and the Indian Ocean dipole dominate rainfall variability in SEA and SAF, while the higher latitude Southern Annular Mode (SAM) exerts a greater influence in SSA. An assessment of the stability of the regional rainfall-climate circulation modes over the past two centuries revealed a number of non-stationarities, the most notable of which occurs during the early nineteenth century around 1820. This corresponds to a time when the influence of ENSO on SEA, SAF and SSA rainfall weakens and there is a strengthening of the influence of SAM. We conclude by advocating the use of long-term palaeoclimate data to estimate decadal rainfall variability for future water resource management.

  15. Radioactive fallout in the southern hemisphere from nuclear weapons tests

    International Nuclear Information System (INIS)

    Fallout in the southern hemisphere, and its origins in the national programs of atmospheric nuclear weapons testing in both hemispheres, are reviewed. Of the 390 nuclear tests conducted in the atmosphere to date, 53 were carried out in the southern hemisphere and it is the second phase of these, between 1966 and 1974, that is seen to have been responsible for the main fallout of short-lived fission products in the southern hemisphere. In contrast to this, the programs of atmospheric nuclear testing in the northern hemisphere up to 1962 are shown to have been the main source of long-lived fission products in fallout in the southern hemisphere. The course followed by this contamination through the environment of the southern hemisphere is traced for the national programs of nuclear testing after 1962 taken separately (France, China) and for the earlier national programs taken together (U.S.S.R., U.S.A. and U.K.). The impact on populations in the southern hemisphere of fallout from atmospheric nuclear weapons tests to date is assessed

  16. Nearshore marine fish diversity in southern California using trawl information from the Southern California Coastal Water Research Project.

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This is a point file of mean fish diversity within 5 minute grid cells. The Shannon Index of diversity was calculated from Southern California Coastal Water...

  17. The Southern Nevada Agency Partnership Science and Research Synthesis: Science to support land management in Southern Nevada

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — This synthesis provides information related to the Southern Nevada Agency Partnership (SNAP) Science and Research Strategy Goal 1 – to restore, sustain and enhance...

  18. The Southern Nevada Agency Partnership Science and Research Synthesis: Science to support land management in Southern Nevada Executive Summary.

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — This synthesis provides information related to the Southern Nevada Agency Partnership (SNAP) Science and Research Strategy Goal 1 – to restore, sustain and enhance...

  19. Chernobyl fallout in southern and central Finland

    International Nuclear Information System (INIS)

    To study the levels and distributions of radionuclides released in the Chernobyl accident, we sampled surface peat from 62 sites in Southern and Central Finland and measured 131I, 134Cs, 137Cs, 132Te, 140Ba, 103Ru, 90Sr, 141Ce, and 95Zr. The distribution of fallout activities was highly uneven, depending on movement of the contaminated air mass and rainfall distribution during the critical days. The highest values observed were 420 kBq m-2 of 131I and 70 kBq m-2 of 137Cs. The nuclide ratios showed wide and partly unexpected variations. The high-boiling-point, or nonvolatile, elements Ce and Zr were spread mostly on a 200-km-wide zone extending across Finland from southwest to northeast. The more volatile elements, I, Ce, and Te, showed quite a different, more widespread, fallout distribution, while an intermediate behavior was observed for Ba, Ru, and possibly Sr. These results can be explained by assuming that pulverized nuclear fuel material released in the reactor explosion on 26 April reached Finland via Poland and the Baltic Sea and traversed the country along the above-mentioned narrow zone, while volatile material, evaporated in the reactor fire from 26 April to 5 May, arrived in several waves and was consequently more widely and evenly spread. From their elemental melting and boiling points, Ru and Mo would appear to belong to the nonvolatile group and Sr to the volatile. Yet, their actual behaviors were opposite; Ru in particular was found in the nonvolatile as well as the volatile fallout, possibly because Ru activities were present in the fuel partly in the metallic state and partly as volatile oxides

  20. Preliminary technology report for Southern Sector bioremediation

    International Nuclear Information System (INIS)

    This project was designed to demonstrate the potential of intrinsic bioremediation and phytoremediation in the Southern Sector of the A/M-Area at the Savannah River Site. A subsurface plume of trichloroethylene (TCE) and perchloroethylene (PCE) is present in the Lost Lake aquifer upgradient of the study site and is predicted to impact the area at some point in the future. The surface area along the Lost lake aquifer seep line where the plume is estimated to emerge was identified. Ten sites along the seep line were selected for biological, chemical, and contaminant treatability analyses. A survey was undertaken in this area to to quantify the microbial and plant population known to be capable of remediating TCE and PCE. The current groundwater quality upgradient and downgradient of the zone of influence was determined. No TCE or PCE was found in the soils or surface water from the area tested at this time. A TCE biodegradation treatability test was done on soil from the 10 selected locations. From an initial exposure of 25 ppm of TCE, eight of the samples biodegraded up to 99.9 percent of all the compound within 6 weeks. This biodegradation of TCE appears to be combination of aerobic and anaerobic microbial activity as intermediates that were detected in the treatability test include vinyl chloride (VC) and the dichloroethenes (DCE) 1,2-cis-dichloroethylene and 1,1-dichloroethylene. The TCE biological treatability studies were combines with microbiological and chemical analyses. The soils were found through immunological analysis with direct fluorescent antibodies (DFA) and microbiological analysis with direct fluorescent antibodies (DFA) and microbiological analysis to have a microbial population of methanotrophic bacteria that utilize the enzyme methane monooxygenase (MMO) and cometabolize TCE

  1. URBAN WATERSHED STUDIES IN SOUTHERN BRAZIL

    Directory of Open Access Journals (Sweden)

    Cristiano Poleto

    2007-12-01

    Full Text Available One of the greatest problems observed in Brazilian urban watersheds are concerned to the amount of solid residues, domestic sewerage and sediments that are disposed in the rivers and streams that drain those areas. This project aims to present these problems through a study of case taken in an urban watershed in Porto Alegre city, Southern Brazil. For this study, different procedures were used, such as field surveys, interviews with the inhabitants, satellite images, sediment samples, flow measures and morphology assessment of part of the local fluvial system to check the degree of instability of the channel. In 2005, it was verified that 42.57% of the watershed was impermeable, considering the paved streets, the residential and commercial buildings and stone pavements. As there was no sewer treatment, most of this sewerage was directly disposed into the stream and the TOC has reached 20% (m/m. Moreover, the occupation of riparian areas, a great amount of soil exposed in the watershed, the nonpaved streets and a great volume of solid residues were causing the instability in the channel, silting the stream bed. The metals (Zn, Pb and Cr selected for this study are most frequently found in high concentrations in urban areas. The results suggest the occurrence of a high enrichment of the fluvial sediment by these metals. The concentrations of these elements vary temporally during storms due to the input of impervious area runoff containing high concentration of elements associated to vehicular traffic and other anthropogenic activities. Then, it is possible to conclude that the contamination of the urban watershed is reflected in the results obtained in the fluvial suspended sediments.

  2. Distribution of entomopathogenic nematodes in Southern Cameroon.

    Science.gov (United States)

    Kanga, Françoise Ngo; Waeyenberge, Lieven; Hauser, Stefan; Moens, Maurice

    2012-01-01

    A first survey of entomopathogenic nematodes (EPN) was conducted in three agro-ecological zones of Southern Cameroon in 2007 and 2008. Entomopathogenic nematodes were recovered from 26 of 251 soil samples (10.4%). Three species, Heterorhabditis baujardi, Steinernema sp. A and Steinernema sp. B were found. The two steinernematids were considered unidentified species. Among the positive samples, 23 samples contained only H. baujardi (88.5%), two contained Steinernema sp. A co-occurring with H. baujardi (7.7%), and one sample contained Steinernema sp. B (3.9%). H. baujardi was frequent in forest and fruit crop (cocoa and oil palm plantations). Steinernema sp. A was found in a tree plantation of teak, Steinernema sp. B in a forest habitat. Nematodes were mostly present in acidic soils with pH ranging from 3.7 to 7.0. The highest EPN presence was recorded in sandy loam, sandy clay loam, sandy clay and clay soils. EPNs were not recovered in sand, loamy sand and clay loam soils. Using principal component analysis for elucidating the major variation patterns among sampling sites, four factors explaining for 73.64% of the overall variance were extracted. Factors were a combination of geographical (latitude, longitude, altitude), soil (pH, contents of sand, silt and clay, organic carbon, texture), and moisture (wilting point, field capacity) parameters as well as climatic parameters (mean annual rainfall, mean air temperature). Logistic regression and redundancy analyses (RDA) revealed that soil pH, longitude, available water and altitude were associated with presence and absence of EPN. Both logistic regression and RDA indicated that, increasing soil pH and longitude, associated with decreasing altitude, led to higher percentages of samples containing entomopathogenic nematodes. PMID:21983478

  3. Acute fasciolosis in cattle in southern Brazil

    Directory of Open Access Journals (Sweden)

    Maria de Lourdes Adrien

    2013-06-01

    Full Text Available This study describes the epidemiological and pathological aspects of an outbreak of acute fasciolosis in cattle in southern Brazil. Fifteen out of 70 three-year-old pregnant cows lost weight in the 30-40 days prior to calving. Clinical signs included diarrhea, weakness, mild anemia and jaundice. Dark yellow fluid in the abdominal cavity was observed at necropsy. Fibrin and clotted blood were adhered to the pericardium and lung, primarily in the diaphragmatic lobes. The liver was enlarged, and the capsular surface was irregular with clear areas and petechiae. At the cut surface, the liver was irregular, firm and edematous, and several hemorrhagic channels could be observed. Areas of fibrosis through the parenchyma and whitish thrombi occluding the great vessels were also observed. The livers of 10 cows that not died were condemned at slaughter for lesions of fasciolosis similar to those observed at necropsy. Microscopically, the liver showed areas of coagulation necrosis, extensive hemorrhages in the streaks or foci and disruption of the parenchyma with neutrophil and eosinophil infiltration. Fibrosis and bile duct proliferation were also observed. Immature Fasciola hepatica flukes were observed in the parenchyma surrounded by degenerated hepatocytes, neutrophils, eosinophils, and hemorrhages. The outbreak occurred on a farm located in an area endemic for fasciolosis, although the acute form of the disease is not common in cattle in this region. It is likely that the cows were infected by F. hepatica metacercariae released in the late fall or early spring in the rice stubble where the herd was grazing prior to calving. Although mortality due to fasciolosis in cattle is infrequent, outbreaks can occur and treatments that are effective in both the immature and adult forms of the parasite should be administered to prevent economic losses.

  4. Hydrological model uncertainty assessment in southern Africa

    Science.gov (United States)

    Hughes, D. A.; Kapangaziwiri, E.; Sawunyama, T.

    2010-06-01

    The importance of hydrological uncertainty analysis has been emphasized in recent years and there is an urgent need to incorporate uncertainty estimation into water resources assessment procedures used in the southern Africa region. The region is characterized by a paucity of accurate data and limited human resources, but the need for informed development decisions is critical to social and economic development. One of the main sources of uncertainty is related to the estimation of the parameters of hydrological models. This paper proposes a framework for establishing parameter values, exploring parameter inter-dependencies and setting parameter uncertainty bounds for a monthly time-step rainfall-runoff model (Pitman model) that is widely used in the region. The method is based on well-documented principles of sensitivity and uncertainty analysis, but recognizes the limitations that exist within the region (data scarcity and accuracy, model user attitudes, etc.). Four example applications taken from different climate and physiographic regions of South Africa illustrate that the methods are appropriate for generating behavioural stream flow simulations which include parameter uncertainty. The parameters that dominate the model response and their degree of uncertainty vary between regions. Some of the results suggest that the uncertainty bounds will be too wide for effective water resources decision making. Further work is required to reduce some of the subjectivity in the methods and to investigate other approaches for constraining the uncertainty. The paper recognizes that probability estimates of uncertainty and methods to include input climate data uncertainties need to be incorporated into the framework in the future.

  5. Cephalopods distribution in the southern Aegean Sea

    Directory of Open Access Journals (Sweden)

    E. LEFKADITOU

    2012-12-01

    Full Text Available The present study concerns faunal composition and distribution of cephalopods in the southern Aegean Sea (35Ζ 13’ 19’’- 37Ζ 55’ 25’’ N, 23Ζ 00’ 15’’ - 28Ζ 15’ 37’’ E. Samples were collected from 708 hauls, obtained by an experimental bottom trawl net during eight surveys carried out in the summers of the years 1994-2001, as well as by commercial trawl net during four surveys carried out in September 1995, December 1995, May and September 1996. The hauls were performed at depths ranging from 16 to 778 m. A total of 34 species of cephalopod in 12 families were identified, including 11 oegopsid squid, 3 myopsid squid, 7 octopod, 3 cuttlefish and 10 sepiolid. Trawling with the experimental net resulted in the capturing of some uncommon pelagic species, such as Ctenopteryx siculaand Octopoteuthis sicula, which were recorded for the first time in the Aegean Sea. Most of the species showed a wide depth and geographical range. The species: Sepia officinalis, Sepietta neglecta, Sepietta obscuraand Sepiola rondeletiwere caught only on the continental shelf, whereas the Ancistroteuthis lichtensteini, Bathypolypous sponsalis, Brachioteuthis riisei, Chiroteuthis veranyi, Ctenopteryx sicula, Heteroteuthis dispar, Histioteuthis reversa, Neorossia caroli and Pyroteuthis margaritiferawere found only on the slope. The rest of the species extended in both continental shelf and slope. The spatial distribution of different species groups is discussed in relation to the hydrology and topography of the study area and the species ecology.

  6. Phenological changes in the southern hemisphere.

    Directory of Open Access Journals (Sweden)

    Lynda E Chambers

    Full Text Available Current evidence of phenological responses to recent climate change is substantially biased towards northern hemisphere temperate regions. Given regional differences in climate change, shifts in phenology will not be uniform across the globe, and conclusions drawn from temperate systems in the northern hemisphere might not be applicable to other regions on the planet. We conduct the largest meta-analysis to date of phenological drivers and trends among southern hemisphere species, assessing 1208 long-term datasets from 89 studies on 347 species. Data were mostly from Australasia (Australia and New Zealand, South America and the Antarctic/subantarctic, and focused primarily on plants and birds. This meta-analysis shows an advance in the timing of spring events (with a strong Australian data bias, although substantial differences in trends were apparent among taxonomic groups and regions. When only statistically significant trends were considered, 82% of terrestrial datasets and 42% of marine datasets demonstrated an advance in phenology. Temperature was most frequently identified as the primary driver of phenological changes; however, in many studies it was the only climate variable considered. When precipitation was examined, it often played a key role but, in contrast with temperature, the direction of phenological shifts in response to precipitation variation was difficult to predict a priori. We discuss how phenological information can inform the adaptive capacity of species, their resilience, and constraints on autonomous adaptation. We also highlight serious weaknesses in past and current data collection and analyses at large regional scales (with very few studies in the tropics or from Africa and dramatic taxonomic biases. If accurate predictions regarding the general effects of climate change on the biology of organisms are to be made, data collection policies focussing on targeting data-deficient regions and taxa need to be financially

  7. Tulbaghia-A Southern African Phytomedicine.

    Science.gov (United States)

    Styger, Gustav; Aboyade, Oluwaseyi M; Gibson, Diana; Hughes, Gail

    2016-04-01

    The phytomedicine Tulbaghia consists of the fresh or dried subterranean organs of various Tulbaghia species. The genus is endemic to Southern Africa and includes about 20 species, of which only T. alliacea and T. capensis are naturally found in the winter rainfall climate area (the Western Cape). The genus forms part of the Alliaceae family and is a geophyte (plants with an underground perennation organ and leaves that die back annually). Their habitat can range from semi-desert to wet and boggy terrain. Wild garlic is most commonly prepared as an infusion or boiled in water and taken orally. Externally, as a medicated bath, wild garlic is used to treat paralysis and rheumatism and to reduce the temperature in a feverish patient. Internally, rhizome or bulb preparations are taken orally to treat fever; as a remedy for colds and influenza, asthma, tuberculosis, and stomach problems; as an antihypertensive; or to expel intestinal worms. It is also used as a prophylactic against winter infections. Rhizome pieces are often placed in castor oil to make eardrops. For fever and high blood pressure, a tea is made from the bulbs or rhizomes and a small cup taken three times daily. The leaves of the plant are used to treat esophageal cancer and may also be eaten as a vegetable. The demand for Tulbaghia in both formal and informal markets has grown exponentially. Sustainable harvesting focuses on only harvesting enough of the plant so that it still has the capacity for self-renewal. However, because both the above-ground and underground parts of Tulbaghia are commonly used in African traditional medicine, destructive harvesting of the whole plant is inevitable, thus necessitating the large-scale organized propagation of these plants. It is therefore important to establish a new strategy for the sustainable harvesting of these plants as commercial crops. PMID:27008423

  8. Phenological Changes in the Southern Hemisphere

    Science.gov (United States)

    Chambers, Lynda E.; Altwegg, Res; Barbraud, Christophe; Barnard, Phoebe; Beaumont, Linda J.; Crawford, Robert J. M.; Durant, Joel M.; Hughes, Lesley; Keatley, Marie R.; Low, Matt; Morellato, Patricia C.; Poloczanska, Elvira S.; Ruoppolo, Valeria; Vanstreels, Ralph E. T.; Woehler, Eric J.; Wolfaardt, Anton C.

    2013-01-01

    Current evidence of phenological responses to recent climate change is substantially biased towards northern hemisphere temperate regions. Given regional differences in climate change, shifts in phenology will not be uniform across the globe, and conclusions drawn from temperate systems in the northern hemisphere might not be applicable to other regions on the planet. We conduct the largest meta-analysis to date of phenological drivers and trends among southern hemisphere species, assessing 1208 long-term datasets from 89 studies on 347 species. Data were mostly from Australasia (Australia and New Zealand), South America and the Antarctic/subantarctic, and focused primarily on plants and birds. This meta-analysis shows an advance in the timing of spring events (with a strong Australian data bias), although substantial differences in trends were apparent among taxonomic groups and regions. When only statistically significant trends were considered, 82% of terrestrial datasets and 42% of marine datasets demonstrated an advance in phenology. Temperature was most frequently identified as the primary driver of phenological changes; however, in many studies it was the only climate variable considered. When precipitation was examined, it often played a key role but, in contrast with temperature, the direction of phenological shifts in response to precipitation variation was difficult to predict a priori. We discuss how phenological information can inform the adaptive capacity of species, their resilience, and constraints on autonomous adaptation. We also highlight serious weaknesses in past and current data collection and analyses at large regional scales (with very few studies in the tropics or from Africa) and dramatic taxonomic biases. If accurate predictions regarding the general effects of climate change on the biology of organisms are to be made, data collection policies focussing on targeting data-deficient regions and taxa need to be financially and logistically

  9. Southern rim of Isidis Planitia basin

    Science.gov (United States)

    2002-01-01

    (Released 11 April 2002) The Science This image, crossing the southern rim of the Isidis Planitia basin, displays the contrasting morphologies of the relatively rough highland terrain (in the lower portion of the image) and the relatively smooth materials of the basin (at top). Upon closer viewing, the basin materials display an extensive record of cratering, including a small cluster of craters just north and west of the two prominent craters in the upper part of the image. This cluster of craters may represent what are called 'secondary' craters, which are craters that form as a result of the ejection of debris from a nearby impact. Alternatively, these craters may have formed simultaneously by the impact of many pieces of a larger meteoroid that broke up upon entry into Mars' atmosphere. The large craters in the image are approximately 800 meters (875 yards) in diameter. Also visible in the image are dark streaks on the east-facing side of the north-south trending ridge. These streaks are likely the result of debris movement down slope. A dark patch of material is visible at the left of the image; dark materials are typically mobile sands, and linear dune forms are apparent within the dark patch. The Story Battered and beaten up, the surface of Mars reads like a history book to geologists, who want to study what has happened to the red planet over its geological history. Look for two larger craters diagonal from one another in the northern part of this image, and then for the smattering of tinier craters near them. How did these smaller craters come to be? Did a large meteoroid streak in through the Martian atmosphere and get broken up as it passed through, pummeling Mars moments later with its smaller, scattered pieces? Or were rocks and dirt blasted off the surface when the two larger craters were formed, only to rain down again on Mars shortly afterwards? No one quite knows for sure.... Another enigmatic-looking feature is near the left center of this image

  10. Microbiome of Yermic Regosol in southern Kazakhstan

    Science.gov (United States)

    Kutovaya, Olga; Lebedeva, Marina; Tkhakakhova, Azida

    2014-05-01

    Biological activity is of utmost importance for the genesis of extremely arid desert soils. The soil surface in arid regions is often covered by biofilms representing a complex biocenosis of algae, bacteria, micromycetes, and, sometimes, mosses or lichens. Biofilms of extremely arid soils form a significant part of the living matter in the desert ecosystems and play the central role in their dynamics. Study of the genetic material recovered directly from the soil samples is the main approach in soil metagenomics. Modern sequencing methods were used to describe the diversity of the microorganisms in soil samples. For the first time, such data were obtained for the extremely arid desert soil (Yermic Regosol) in southern Kazakhstan (flat alluvial plain; 43° 42'53.2" N; 79°25'29.1" E; 615 m asl). Taxonomic identification of nucleotide sequences and comparative analysis of microbial communities were performed using VAMPS. The classification of the sequences was performed using RDP. As the primers used were based on the sequences of 16S-rRNA gene of bacteria and archaea, we could analyze the prokaryotic community. Along with bacteria and archaea with established systematic position, all soil samples contained unidentified sequences (5.2-5.3%). Bacteria predominated at the domain level (65.9-74.9%), although their portion was much lower in comparison with that in less arid soils, where it reached 94-100%. Archaea were present as minor components (0.3-0.5%). Dominant groups of bacteria were represented by Proteobacteria (43.9-50.8%), Actinobacteria (9.5-10%), Firmicutes (0.8-2.4%), Verrucomicrobia (1.1-3%), Acidobacteria (1.1-2%), Bacteroidetes (1.2-1.4%). The portion of other phyla was less than 1%. Thus, bacterial phyla Proteobacteria, Actinobacteria and Acidobacteria constitute the core component of the microbiome. Archaea are represented by phylum Crenarchaeota. A key feature of the extremely arid soils is the presence of large numbers (24.7-33.6%) of cyanobacteria

  11. Microphysics and Southern Ocean Cloud Feedback

    Science.gov (United States)

    McCoy, Daniel T.

    Global climate models (GCMs) change their cloud properties in the Southern Ocean (SO) with warming in a qualitatively consistent fashion. Cloud albedo increases in the mid-latitudes and cloud fraction decreases in the subtropics. This creates a distinctive 'dipole' structure in the SW cloud feedback. However, the shape of the dipole varies from model to model. In this thesis we discuss the microphysical mechanisms underlying the SW cloud feedback over the mid-latitude SO. We will focus on the negative lobe of the dipole. The negative SW cloud feedback in the mid-latitudes is created by transitions from ice to liquid in models. If ice transitions to liquid in mixed-phase clouds the cloud albedo increases because ice crystals are larger than liquid droplets and therefore more reflective for a constant mass of water. Decreases in precipitation efficiency further enhance this effect by decreasing sinks of cloud water. This transition is dependent on the mixed-phase cloud parameterization. Parameterizations vary wildly between models and GCMs disagree by up to 35 K on the temperature where ice and liquid are equally prevalent. This results in a wide spread in the model predictions of the increase in liquid water path (LWP, where the path is the vertically integrated mass of water) with warming that drives the negative optical depth cloud feedback. It is found that this disagreement also results in a wide array of climate mean-states as models that create liquid at lower temperatures have a higher mean-state LWP, lower ice water path (IWP), and higher condensed (ice and liquid) water path (CWP). This presents a problem in climate models. GCMs need to have a reasonable planetary albedo in their climate mean-state. We show evidence that GCMs have tuned cloud fraction to compensate for the variation in mid-latitude cloud albedo driven by the mixed-phase cloud parameterization. This tuning results in mid-latitude clouds that are both too few and too bright as well as a

  12. Southern Half of Spirit's 'Bonestell' Panorama

    Science.gov (United States)

    2008-01-01

    This 180-degree panorama shows the southward vista from the location where Spirit is spending its third Martian winter inside Mars' Gusev Crater. The rover's overwintering location is on the northern edge of a low plateau informally called 'Home Plate,' which is about 80 meters or 260 feet in diameter. This view combines 168 different exposures taken with Spirit's panoramic Camera (Pancam) 42 pointings with 4 filters at each pointing. Spirit took the first of these frames during the mission's 1,477th Martian day, or sol, (February 28, 2008) two weeks after the rover made its last move to reach the location where it would stop driving for the winter. Solar energy at Gusev Crater is so limited during the Martian winter that Spirit does not generate enough electricity to drive, nor even enough to take many images per day. The last frame for this mosaic was taken on Sol 1599 (July 2, 2008). The rover team plans for Spirit to finish taking images for the northern half of the scene during the Martian spring. The northwestern edge of Home Plate is visible in the right foreground. The blockier, more sharply shadowed texture there is layered sandstone whose layering is tilted inward toward the edge of the Home Plate platform. A dark rock on top of Home Plate in that area is a porous volcanic basalt unlike rocks nearby. The northeastern edge of Home Plate is visible in the left foreground. Spirit first climbed onto Home Plate on that region, in early 2006. Rover tracks from driving by Spirit are visible on Home plate in the center and right of the image. These were made during Spirit's second exploration on top of the plateau, which began when Spirit climbed onto the southern edge of Home Plate in September, 2007. In the center foreground, the turret of tools at the end of Spirit's robotic arm appears in duplicate because the arm was repositioned between the days when the images making up that part of the mosaic were taken. On the horizon, the highest point is 'McCool Hill

  13. Southern Half of Spirit's 'Bonestell' Panorama (Anaglyph)

    Science.gov (United States)

    2008-01-01

    This stereo, 180-degree panorama shows the southward vista from the location where Spirit is spending its third Martian winter inside Mars' Gusev Crater. The rover's overwintering location is on the northern edge of a low plateau informally called 'Home Plate,' which is about 80 meters or 260 feet in diameter. The view combines a stereo pair so that it appears three-dimensional when seen through blue-red glasses. Spirit took the first of the images that are combined into this view during the mission's 1,477th Martian day, or sol, (February 28, 2008) two weeks after the rover made its last move to reach the location where it would stop driving for the winter. Solar energy at Gusev Crater is so limited during the Martian winter that Spirit does not generate enough electricity to drive, nor even enough to take many images per day. The last frame for this mosaic was taken on Sol 1599 (July 2, 2008). The rover team plans for Spirit to finish taking images for the northern half of the scene during the Martian spring. The northwestern edge of Home Plate is visible in the right foreground. The blockier, more sharply shadowed texture there is layered sandstone whose layering is tilted inward toward the edge of the Home Plate platform. A dark rock on top of Home Plate in that area is a porous volcanic basalt unlike rocks nearby. The northeastern edge of Home Plate is visible in the left foreground. Spirit first climbed onto Home Plate on that region, in early 2006. Rover tracks from driving by Spirit are visible on Home plate in the center and right of the image. These were made during Spirit's second exploration on top of the plateau, which began when Spirit climbed onto the southern edge of Home Plate in September, 2007. In the center foreground, the turret of tools at the end of Spirit's robotic arm appears in duplicate because the arm was repositioned between the days when the images making up that part of the mosaic were taken. On the horizon, the highest point is 'Mc

  14. Southern Appalachian assessment. Summary report, Report 1 of 5

    Energy Technology Data Exchange (ETDEWEB)

    NONE

    1996-07-01

    This final report for the Southern Appalachian Man and the Biosphere Program is comprised of two documents: (1) a brief summary of programs and projects, and (2) a more extensive summary report included as an attachment. The purpose of the program is to promote a sustainable balance between the conservation of biological diversity, compatible economic uses, and cultural values across the Southern Appalachians. Program and project areas addressing regional issues include environmental monitoring and assessment, sustainable development/sustainable technologies, conservation biology, ecosystem management, environmental education and training, cultural and historical resources, and public information and education. The attached summary report is one of five that documents the results of the Southern Appalachian Assessment; it includes atmospheric, social/cultural/economic, terrestrial, and aquatic reports.

  15. Seismic Zonation of Central-Southern Hunan Province, China

    Institute of Scientific and Technical Information of China (English)

    Li Ying; Xu Guangyin; Chen Kun; Gao Mengtan

    2007-01-01

    Based on basic data used in compiling the Zonation Map of Earthquake Ground Motion Parameters in China, recent research on seismic safety assessment for engineering sites in central-southern Hunan Province, the new attenuation relationships of moderate earthquakes and the background seismicity data obtained by modern instrumental earthquake records since 1970, a new result of seismic zonation of central-southern Hunan Province is provided. The result shows that the area with PGA = 0.05g has obviously increased in the new map compared with the previous one and is relatively consistent with the seismic disaster characteristics of moderate earthquakes that took place in the central-southern part of Hunan in recent years.This result will benefit the research and compilation of a new-generation seismic zonation map of earthquake ground motion parameters and the seismic hazard assessment in the moderate earthquake active regions in the central and eastern part of China.

  16. Decreased calcification in the Southern Ocean over the satellite record

    Science.gov (United States)

    Freeman, Natalie M.; Lovenduski, Nicole S.

    2015-03-01

    Widespread ocean acidification is occurring as the ocean absorbs anthropogenic carbon dioxide from the atmosphere, threatening marine ecosystems, particularly the calcifying plankton that provide the base of the marine food chain and play a key role within the global carbon cycle. We use satellite estimates of particulate inorganic carbon (PIC), surface chlorophyll, and sea surface temperature to provide a first estimate of changing calcification rates throughout the Southern Ocean. From 1998 to 2014 we observe a 4% basin-wide reduction in summer calcification, with ˜9% reductions in large regions (˜1 × 106 km2) of the Pacific and Indian sectors. Southern Ocean trends are spatially heterogeneous and primarily driven by changes in PIC concentration (suspended calcite), which has declined by ˜24% in these regions. The observed decline in Southern Ocean calcification and PIC is suggestive of large-scale changes in the carbon cycle and provides insight into organism vulnerability in a changing environment.

  17. Lassa Virus Seroprevalence in Sibirilia Commune, Bougouni District, Southern Mali

    Science.gov (United States)

    Sogoba, Nafomon; Rosenke, Kyle; Adjemian, Jennifer; Diawara, Sory Ibrahim; Maiga, Ousmane; Keita, Moussa; Konaté, Drissa; Keita, Abdoul Salam; Sissoko, Ibrahim; Boisen, Matt; Nelson, Diana; Oottamasathien, Darin; Millett, Molly; Garry, Robert F.; Branco, Luis M.; Traoré, Sékou F.; Doumbia, Seydou; Feldmann, Heinz

    2016-01-01

    Lassa virus (LASV) is endemic to several nations in West Africa. In Mali, LASV was unknown until an exported case of Lassa fever was reported in 2009. Since that time, rodent surveys have found evidence of LASV-infected Mastomys natalensis rats in several communities in southern Mali, near the border with Côte d’Ivoire. Despite increased awareness, to date only a single case of Lassa fever has been confirmed in Mali. We conducted a survey to determine the prevalence of LASV exposure among persons in 3 villages in southern Mali where the presence of infected rodents has been documented. LASV IgG seroprevalence ranged from 14.5% to 44% per village. No sex bias was noted; however, seropositivity rates increased with participant age. These findings confirm human LASV exposure in Mali and suggest that LASV infection/Lassa fever is a potential public health concern in southern Mali. PMID:26981786

  18. Energy security in South America and Southern Africa: synthesis report

    International Nuclear Information System (INIS)

    In developing countries, the ability to provide adequate and reliable energy supplies is a key to sustainable economic development. The aim of this report is to study the energy supply security in both Southern Africa and South America and how these regions can participate in the international effort to combat climate change. This report showed that South Africa's energy sector mostly relies on carbon intensive coal while Brazil is mainly supplied by hydroelectricity. It was found that in both countries energy needs will increase significantly due to rising demand both internally and at a regional scale. However it was also shown that both Southern Africa and South America have important hydro, solar and wind renewable resources which could enhance their electricity security while minimizing their environmental impacts. This study demonstrated that Southern Africa and South America can enhance their electricity security through the use of renewable energies but that technology and financing is needed to develop the sector.

  19. Invasive species in southern Nevada: Chapter 4 in The Southern Nevada Agency Partnership science and research synthesis: science to support land management in southern Nevada

    Science.gov (United States)

    Brooks, Matthew L.; Ostoja, Steven M.; Chambers, Jeanne

    2013-01-01

    Southern Nevada contains a wide range of topographies, elevations, and climactic zones emblematic of its position at the ecotone between the Mojave Desert, Great Basin, and Colorado Plateau ecoregions. These varied environmental conditions support a high degree of biological diversity (Chapter 1), but they also provide opportunities for a wide range of invasive species. In addition, the population center of the Las Vegas valley, and the agricultural area scattered throughout Clark, Lincoln, and Nye counties, all connected by a network of roads and highways, plus ephemeral and perennial watercourses, provide abundant opportunities for new invaders to be transported into and within southern Nevada (Brooks 2009; Brookes and Lair 2009). Invasive species are a concern for land managers because they can compete directly with native species (Brooks 2000; Chambers and others 2007; DeFlaco and others 2003, 2007; Mazzola and others 2010), change habitat conditions (Brooks and Esque 2002; Esque and others 2010; Miller and others 2011), and alter ecosystems properties (Brooks and Matchett 2006; Brooks and Pyke 2001; Evans and others 2001). Many invasive species have already established and spread to the point that they are now considered to pose significant problems in southern Nevada. However, there are likely many more than have wither not been transported to or colonized the region, or have established by for various reasons not spread or increased in abundance to the point where they have a significant impact. Land managers must understand both current and potential future problems posed by invasive species to appropriately prioritize management actions. This chapter addressed Sub-goal 1.2 in the SNAP Science Research Strategy (table 1.3; Turner and others 2009), which is to protect southern Nevada's ecosystems from the adverse impacts of invasive species. It provides a brief overview of the key concepts associated with the ecology and management of invasive species, and

  20. Maintaining and restoring sustainable ecosystems in southern Nevada: Chapter 7 in The Southern Nevada Agency Partnership science and research synthesis: science to support land management in southern Nevada

    Science.gov (United States)

    Chambers, Jeanne C.; Pendleton, Burton K.; Sada, Donald W.; Ostoja, Steven M.; Brooks, Matthew L.

    2013-01-01

    Managers in southern Nevada are challenge with determining appropriate goals and objectives and developing viable approaches for maintaining and restoring sustainable ecosystems in a time of rapid socio-ecological and environmental change. Sustainable or "healthy" ecosystems supply clean air, water and habitat for a diverse array of plants and animals. As described in Chapter 1, sustainable ecosystems retain characteristic processes like hydrological flux and storage, geomorphic processes, biogeochemical cycling and storage, biological activity and productivity, and population regeneration and reproduction over the normal cycle of disturbance events (modified from Chapin and others 1996 and Christensen and others 1996). Ecological restoration of stressed or disturbed ecosystems in an integral part of managing for sustainable ecosystems. The Society of Ecological Restoration International (SERI) defines ecological restoration as the process of assisting the recovery of an ecosystem that has been degraded, damaged, or destroyed (SERI 2004). Many of the southern Nevada's ecosystems are being subjected to anthropogenic stressors that span global, regional, and local scales (Chapter 2)., and are crossing ecological thresholds to new alternative states (Chapter 4 and Chapter 5). These alternative states often represent novel communities with disturbance regimes that differ significantly from historic conditions. Past management and restoration goals often focused on returning ecosystems to pre-disturbance conditions (Harris and others 2006). This approach assumes stable or equilibrium conditions and ignores changes in ecosystems processes due to land uses, increases in CO2 concentrations, and climate change. A more realistic approach is to base management and restoration goals on the current potential of an ecosystem to support a given set of ecological conditions, and on the likelihood of future change due to warming climate (Harris and others 2006). This approach

  1. Potassium-argon geochronology of the eastern Transverse Ranges and southern Mojave Desert, southern California

    Science.gov (United States)

    Miller, F.K.; Morton, D.M.

    1980-01-01

    More than 200 potassium-argon apparent ages on minerals from crystalline rocks, chiefly from the San Bernardino and eastern San Gabriel Mountains and the southern Mojave Desert, define an area greater than 10,000 km 2 in which the potassium-argon isotopic systematics have been highly disturbed. The disturbance or disturbances appear to have culminated at different times in different parts of the region, ranging from 57 m.y. ago in the eastern San Gabriel Mountains to about 70 m.y. ago in the southern Mojave Desert. The region can be subdivided into three parts on the basis of potassium-argon dating: (1) An inner area of anomalous ages in which the rocks yield apparent potassium-argon ages that indicate complete or nearly complete resetting of the isotopic system. (2) An outer area in which the rocks yield apparent ages that are, or approach, emplacement ages. (3) A zone separating these two areas from which rocks yield discordant apparent ages on coexisting mineral pairs. This discordant zone varies in width from about 6 to 12 km and grades inward to rocks reset to the degree that they yield concordant potassium-argon apparent ages on coexisting mineral pairs and outward toward rocks that yield near-concordant apparent ages. Rocks from the center and the inner parts of the discordant zone yield the most discordant apparent ages. Contouring of the apparent ages defines the extent of the reset region that occurs on both sides of the San Andreas fault. The apparent ages can be contoured across the fault, although the position of the fault is well defined by abrupt deflection of the contours parallel to the fault. The reverse fault bounding the north side of the San Bernardino Mountains mayor may not be reflected by offset contours; correlation of possible offset features across the fault is uncertain. Several northwest-trending faults on the Mojave Desert strongly disrupt the contours but do not show the right-lateral displacements that have been attributed to them on

  2. Southern images - RGP gmap98 | LSDB Archive [Life Science Database Archive metadata

    Lifescience Database Archive (English)

    Full Text Available [ Credits ] BLAST Search Image Search Home About Archive Update History Contact us RGP gmap98 Southe...rn images Data detail Data name Southern images Description of data contents Parental Southe...rn hybridization image files. Data file File name: rgp_gmap98_southern_image.zip File URL: ftp://ftp.biosci...encedbc.jp/archive/rgp-gmap98/LATEST/rgp_gmap98_southern_image.zip File size: 69....2 MB Simple search URL - Data acquisition method Southern hybridization Data analysis method For genotype se

  3. Southern images - RGP gmap | LSDB Archive [Life Science Database Archive metadata

    Lifescience Database Archive (English)

    Full Text Available [ Credits ] BLAST Search Image Search Home About Archive Update History Contact us RGP gmap Southe...rn images Data detail Data name Southern images Description of data contents Parents Southern... hybridization image files. Data file File name: rgp_gmap_southern_image.zip File URL: ftp://ftp.bioscienced...bc.jp/archive/rgp-gmap/LATEST/rgp_gmap_southern_image.zip File size: 37.3 MB Simp...le search URL - Data acquisition method Southern hybridization Data analysis method For genotype segregation in F2 plants, Southe

  4. Climate change: an issue for parliamentarians in Southern Africa

    Energy Technology Data Exchange (ETDEWEB)

    Chandani, Achala; Anderson, Simon; Schoch, Corinne; Smith, Barry

    2011-11-15

    Parliamentarians can play a key role in building climate resilience by bringing constituents' concerns into national forums, scrutinising how governments are responding to domestic and global climate change issues, and ensuring policy continuity. In the Southern African Customs Union, members of parliament often struggle to fulfill this role, hampered by limited understanding of the issues, fragmented policy and legal frameworks and competing priorities. Boosting parliamentarians' capacity to engage effectively with climate change in Southern Africa requires them to strengthen their research capabilities, diversify their sources of information and build cross-party groups on climate change.

  5. ENSO effects on primary productivity in Southern Atacama desert

    OpenAIRE

    Squeo, F. A.; Tracol, Y.; López, D.; J. R. Gutiérrez; A. M. Cordova; Ehleringer, J. R.

    2006-01-01

    In the winter-rain southern Atacama Desert of the Coquimbo Region of Chile, El Niño - Southern Oscillation (ENSO) events modulate primary productivity. In this region, there are important changes in water availability between La Niña (dry) and El Niño (rainy) years. Using inter-annual comparisons of LANDSAT images from 30° to 31° S latitude, we observed changes in primary productivity between dry and rainy years at the regional level. There were also s...

  6. Lessons learned by southern states in transportation of radioactive materials

    International Nuclear Information System (INIS)

    This report has been prepared under a cooperative agreement with DOE's Office of Civilian Radioactive Waste Management (OCRWM) and is a summary of the lessons learned by southern states regarding the transportation of radioactive materials including High-Level Radioactive Wastes (HLRW) and Spent Nuclear Fuel (SNF). Sources used in this publication include interviews of state radiological health and public safety officials that are members of the Southern States Energy Board (SSEB) Advisory Committee on Radioactive Materials Transportation, as well as the Board's Transuranic (TRU) Waste Transportation Working Group. Other sources include letters written by the above mentioned committees concerning various aspects of DOE shipment campaigns

  7. Whales from space: counting southern right whales by satellite

    OpenAIRE

    Fretwell, Peter T.; Staniland, Iain J; Forcada, Jaume

    2014-01-01

    We describe a method of identifying and counting whales using very high resolution satellite imagery through the example of southern right whales breeding in part of the Golfo Nuevo, Península Valdés in Argentina. Southern right whales have been extensively hunted over the last 300 years and although numbers have recovered from near extinction in the early 20th century, current populations are fragmented and are estimated at only a small fraction of pre-hunting total. Recent extreme right wha...

  8. History of ‘swine fever’ in Southern Africa

    OpenAIRE

    Mary-Louise Penrith

    2013-01-01

    The histories of the two swine fevers in southern Africa differ widely. Classical swine fever (hog cholera) has been known in the northern hemisphere since 1830 and it is probable that early cases of ‘swine fever’ in European settlers’ pigs in southern Africa were accepted to be that disease. It was only in 1921 that the first description of African swine fever as an entity different from classical swine fever was published after the disease had been studied in settlers’ pigs in Kenya. Shortl...

  9. A synopsis of the tribe Desmodieae (Fabaceae in southern Africa

    Directory of Open Access Journals (Sweden)

    B. D. Schrire

    1988-12-01

    Full Text Available The tribe Desmodieae has a pantropical distribution and is one of the most advanced tribes in the subfamily Papilionoideae. Its greatest centres of development are in tropical Asia and America. Africa is relatively poorly endowed and only four genera comprising 16 species occur in the flora of southern Africa. Many of these species are widespread in the Old World tropics and the few African endemics appear to be closely related to them. A synopsis of the genera Desmodium, Pseudarthria, Alysicarpus and Lespedeza is given for southern Africa.

  10. Synopsis of the genus Salix (Salicaceae in southern Africa

    Directory of Open Access Journals (Sweden)

    K. L. Immelman

    1987-12-01

    Full Text Available One species of  Salix, S. mucronata Thunb. (=S .  subserrata Willd., with five subspecies, is recognized as indigenous to the southern African region. Problems of delimitation in the genus in southern Africa are discussed, and a key to the indigenous and exotic taxa is presented. The synonymy of the subspecies is presented, with leaf silhouettes and a distribution map of each. The following new combinations are made: S. mucronata subsp. hirsuta (Thunb. Immelman, S.  mucronata subsp. capensis (Thunb. Immelman, 5.  mucronata subsp. woodii (Seemen Immelman and  S. mucronata subsp. wilmsii (Seemen Immelman.

  11. Estandarización de la técnica de western blot para el diagnóstico específico de la enfermedad de Chagas utilizando antígenos de excreción-secreción de los epimastigotes de Trypanosoma cruzi

    OpenAIRE

    Hermes Escalante; César Jara; Kelly Davelois; Miguel Iglesias; Adderly Benites; Renzo Espinoza

    2014-01-01

    Objetivos. Evaluar la eficacia del Western Blot para el diagnóstico específico de la enfermedad de Chagas utilizando antígenos de excreción-secreción de epimastigotes de Trypanosoma cruzi. Materiales y métodos. Los antígenos fueron obtenidos luego de veinte horas de incubación en medio Minimum Essential Medium-Eagle, los cuales fueron preparados a la concentración proteica de 0,2 ug/uL para ser enfrentados a 10 mL de un pool de sueros de pacientes con la enfermedad de Chagas y un conjugado an...

  12. Utilización de la autorradiografía en la detección de antígenos predominantes de Trichinella spiralis en tres modelos experimentales WESTERN BLOT AUTORADIOGRAPHY IN THE DETECTION OF DOMINANT ANTIGENS OF Trichinella spiralis IN THREE EXPERIMENTAL ANIMALS MODELS

    OpenAIRE

    MARIA ALEJANDRA MORENO CARCIA; MARIA PATROCINIO RAMOS DE LEON; JESUS MUÑOZ ESCOBEDO

    2001-01-01

    En el presente estudio se llevó a cabo la detección de antígenos predominantes de Trichinella spiralis en 3 modelos experimentales (Rata, ratón y conejo), mediante Western blot (WB) autorradiografía. A los animales experimentales se les administró larvas infectantes del parásito y se sangraron pre-inoculación y a la cuarta semana postinfección. El AST (Antígeno soluble de Trichinella) se obtuvo a partir de larvas de músculo de rata experimentalmente infectadas. Con el AST se realizaron corrid...

  13. Holocene Geologic Slip Rate for the Banning Strand of the Southern San Andreas Fault near San Gorgonio Pass, Southern California

    Science.gov (United States)

    Gold, P. O.; Behr, W. M.; Rood, D. H.; Kendrick, K. J.; Rockwell, T. K.; Sharp, W. D.

    2014-12-01

    We present the first Holocene geologic slip rate for the Banning strand of the southern San Andreas Fault in southern California. The southern San Andreas Fault splays into the sub-parallel Banning and Mission Creek strands in the northwestern Coachella Valley, and although it has long been surmised that the Banning strand eventually accommodates the majority of displacement and transfers it into San Gorgonio Pass, until now it has been uncertain how slip is actually partitioned between these two fault strands. Our new slip rate measurement, critically located at the northwestern end of the Banning strand, overlaps within errors with the published rate for the southern San Andreas Fault measured at Biskra Palms Oasis. This indicates that the majority of southern San Andreas Fault displacement transfers from the southeastern Mission Creek strand northwest to the Banning strand and into San Gorgonio Pass. Our result corroborates the UCERF3 hazard model, and is consistent with most previous interpretations of how slip is partitioned between the Banning and Mission Creek fault strands. To measure this slip rate, we used B4 airborne LiDAR to identify the apex of an alluvial fan offset laterally 30 ± 5 m from its source. We calculated the depositional age of the fan using 10Be in-situ cosmogenic exposure dating of 5 cobbles and a depth profile. We calculated a most probable fan age of 4.0 +2.0/-1.6 ka (1σ) by combining the inheritance-corrected cobble ages assuming Gaussian uncertainty. However, the probability density function yielded a multi-peaked distribution, which we attribute to variable 10Be inheritance in the cobbles, so we favor the depth profile age of 2.2-3.6 ka. Combined, these measurements yield a late Holocene slip rate for the Banning strand of the southern San Andreas Fault of 11.1 +3.1/-3.3 mm/yr. This slip rate does not preclude possibility that some slip transfers north along the Mission Creek strand and the Garnet Hill fault, but it does confirm

  14. Moho depth and crustal composition in Southern Africa

    DEFF Research Database (Denmark)

    Soliman, Mohammad Youssof Ahmad; Thybo, Hans; Artemieva, Irina;

    2013-01-01

    We present new results on structure, thickness, and composition of the crust in southern Africa based on 6300 seismic receiver functions at 85 stations. Application of Hk-stacking to the entire SASE dataset and use of multi-frequency bands improve resolution substantially. We observe a highly...

  15. Northern versus southern Canadian warming from inversions of temperature logs

    Czech Academy of Sciences Publication Activity Database

    Majorowicz, J. A.; Šafanda, Jan

    Moscow, 2002, s. 175-176. [The Earth's thermal field and related research methods. Moscow (RU), 17.06.2002-20.06.2002] Institutional research plan: CEZ:AV0Z3012916 Keywords : well temperature * northern Canada * southern Canada * warming Subject RIV: DC - Siesmology, Volcanology, Earth Structure

  16. Southern Ocean warming delayed by circumpolar upwelling and equatorward transport

    Science.gov (United States)

    Armour, Kyle C.; Marshall, John; Scott, Jeffery R.; Donohoe, Aaron; Newsom, Emily R.

    2016-07-01

    The Southern Ocean has shown little warming over recent decades, in stark contrast to the rapid warming observed in the Arctic. Along the northern flank of the Antarctic Circumpolar Current, however, the upper ocean has warmed substantially. Here we present analyses of oceanographic observations and general circulation model simulations showing that these patterns--of delayed warming south of the Antarctic Circumpolar Current and enhanced warming to the north--are fundamentally shaped by the Southern Ocean's meridional overturning circulation: wind-driven upwelling of unmodified water from depth damps warming around Antarctica; greenhouse gas-induced surface heat uptake is largely balanced by anomalous northward heat transport associated with the equatorward flow of surface waters; and heat is preferentially stored where surface waters are subducted to the north. Further, these processes are primarily due to passive advection of the anomalous warming signal by climatological ocean currents; changes in ocean circulation are secondary. These findings suggest the Southern Ocean responds to greenhouse gas forcing on the centennial, or longer, timescale over which the deep ocean waters that are upwelled to the surface are warmed themselves. It is against this background of gradual warming that multidecadal Southern Ocean temperature trends must be understood.

  17. Perinatal Screening for Chagas Disease in Southern Texas.

    Science.gov (United States)

    Edwards, Morven S; Rench, Marcia A; Todd, Charles W; Czaicki, Nancy; Steurer, Francis J; Bern, Caryn; Montgomery, Susan P

    2015-03-01

    Perinatal screening for Trypanosoma cruzi in a cohort of 4000 predominantly Hispanic women in southern Texas revealed that Chagas disease occurs with sufficient frequency (0.25%) that targeted perinatal screening should be considered to identify infected mothers and infants at risk for congenital infection. PMID:26407360

  18. METRIC estimated ET evaluation on the semiarid Southern High Plains

    Science.gov (United States)

    Declining groundwater levels in the Southern High Plains of the United States, and the fact that agriculture in this region uses more than 90% of groundwater withdrawals, requires efficient agricultural water use. Accurate regional evapotranspiration (ET) maps would provide valuable information on c...

  19. Virginia and the Southern Regional Education Board, December 2014

    Science.gov (United States)

    Southern Regional Education Board (SREB), 2014

    2014-01-01

    This document details Virginia's participation in Southern Regional Education Board (SREB) programs and services from December 2013 through November 2014. Each member state receives a number of general services, plus access to targeted programs funded by grants, contracts and fees. Appropriations support SREB's core operations and general…

  20. The Southern Regional Education Board and Member States, January 2014

    Science.gov (United States)

    Southern Regional Education Board (SREB), 2014

    2014-01-01

    This report provides an overview of Southern Regional Education Board (SREB) programs and services and how each member state participated in them from July 2012 through December 2013. The nation's first regional interstate compact for education, SREB is today the most comprehensive, bringing together states to enable them to achieve…

  1. Southern Regional Education Board: Serving Community Colleges in the South

    Science.gov (United States)

    Blanco, Cheryl D.

    2015-01-01

    The Southern Regional Education Board (SREB) is a nonprofit, nonpartisan regional compact focused on critical issues with strong potential to improve quality of life by advancing public education. Designed primarily for legislators and other policymakers and policyshapers, SREB's research is policy-oriented, descriptive, and centered on statewide…

  2. Texas and the Southern Regional Education Board, December 2014

    Science.gov (United States)

    Southern Regional Education Board (SREB), 2014

    2014-01-01

    This document details Texas' participation in Southern Regional Education Board (SREB) programs and services from December 2013 through November 2014. Each member state receives a number of general services, plus access to targeted programs funded by grants, contracts and fees. Appropriations from member states support core operations and general…

  3. Florida and the Southern Regional Education Board, December 2014

    Science.gov (United States)

    Southern Regional Education Board (SREB), 2014

    2014-01-01

    This report details Florida's participation in Southern Regional Education Board (SREB) programs and services from December 2013 through November 2014. Appropriations from member states support SREB's core operations and general services. SREB leverages the long-standing commitment of member states to attract external funding for an array of…

  4. Alabama and the Southern Regional Education Board, December 2014

    Science.gov (United States)

    Southern Regional Education Board (SREB), 2014

    2014-01-01

    This report details Alabama's participation in Southern Regional Education Board (SREB) programs and services from December 2013 through November 2014. Appropriations from member states support SREB's core operations and general services. SREB leverages the long-standing commitment of member states to attract external funding for an array of…

  5. Louisiana and the Southern Regional Education Board, December 2014

    Science.gov (United States)

    Southern Regional Education Board (SREB), 2014

    2014-01-01

    This report details Louisiana's participation in Southern Regional Education Board (SREB) programs and services from December 2013 through November 2014. Appropriations from member states support SREB's core operations and general services. SREB leverages the long-standing commitment of member states to attract external funding for an array of…

  6. Delaware and the Southern Regional Education Board, December 2014

    Science.gov (United States)

    Southern Regional Education Board (SREB), 2014

    2014-01-01

    This report details Delaware's participation in Southern Regional Education Board (SREB) programs and services from December 2013 through November 2014. Appropriations from member states support SREB's core operations and general services. SREB leverages the long-standing commitment of member states to attract external funding for an array of…

  7. North Carolina and the Southern Regional Education Board, December 2014

    Science.gov (United States)

    Southern Regional Education Board (SREB), 2014

    2014-01-01

    This document details North Carolina's participation in Southern Regional Education Board (SREB) programs and services from December 2013 through November 2014. Appropriations from member states support SREB's core operations and general services. SREB leverages the long-standing commitment of member states to attract external funding for an array…

  8. Tennessee and the Southern Regional Education Board, December 2014

    Science.gov (United States)

    Southern Regional Education Board (SREB), 2014

    2014-01-01

    This document details Tennessee's participation in Southern Regional Education Board (SREB) programs and services from December 2013 through November 2014. Each member state receives a number of general services, plus access to targeted programs funded by grants, contracts and fees. Appropriations from member states support SREB's core operations…

  9. Kentucky and the Southern Regional Education Board, December 2014

    Science.gov (United States)

    Southern Regional Education Board (SREB), 2014

    2014-01-01

    This report details Kentucky's participation in Southern Regional Education Board (SREB) programs and services from December 2013 through November 2014. Appropriations from member states support SREB's core operations and general services. SREB leverages the long-standing commitment of member states to attract external funding for an array of…

  10. Oklahoma and the Southern Regional Education Board, December 2014

    Science.gov (United States)

    Southern Regional Education Board (SREB), 2014

    2014-01-01

    This document details Oklahoma's participation in Southern Regional Education Board (SREB) programs and services from December 2013 through November 2014. Appropriations from member states support SREB's core operations and general services. SREB leverages the long-standing commitment of member states to attract external funding for an array of…

  11. Southern Regional Education Board Final Legislative Report. 2010 Final Report

    Science.gov (United States)

    Southern Regional Education Board (SREB), 2010

    2010-01-01

    The Southern Regional Education Board (SREB) follows education budgets and legislation during regular and special legislative sessions. Current actions are found in Legislative Reports that are released on a timely basis during the months that SREB state legislatures are in session, usually from January through July. These reports follow education…

  12. South Carolina and the Southern Regional Education Board, December 2014

    Science.gov (United States)

    Southern Regional Education Board (SREB), 2014

    2014-01-01

    This document details South Carolina's participation in Southern Regional Education Board (SREB) programs and services from December 2013 through November 2014. Each member state receives a number of general services, plus access to targeted programs funded by grants, contracts and fees. Appropriations from member states support SREB's core…

  13. Maryland and the Southern Regional Education Board, December 2014

    Science.gov (United States)

    Southern Regional Education Board (SREB), 2014

    2014-01-01

    This report details Maryland's participation in Southern Regional Education Board (SREB) programs and services from December 2013 through November 2014. Appropriations from member states support SREB's core operations and general services. SREB leverages the long-standing commitment of member states to attract external funding for an array of…

  14. The Southern Regional Education Board and Member States, December 2014

    Science.gov (United States)

    Southern Regional Education Board (SREB), 2014

    2014-01-01

    This report provides an overview of Southern Regional Education Board (SREB) programs and services and how each member state participated in them from December 2013 through November 2014. SREB serves a wide range of education policy leaders, including governors, state legislators, executive and legislative staff, and K-12 and postsecondary agency…

  15. Early Eocene birds from La Borie, southern France

    DEFF Research Database (Denmark)

    Bourdon, Estelle; Mourer-Chauviré, Cécile; Laurent, Yves

    2016-01-01

    The Early Eocene locality of La Borie is located in the village of Saint-Papoul, in southern France. These Eocene fluvio-lacustrine clay deposits have yielded numerous vertebrate remains. Mammalian taxa found in the fossiliferous levels indicate an age near the reference level MP 8–9, which...

  16. Brief Analysis of E-business in China Southern Airlines

    Institute of Scientific and Technical Information of China (English)

    刘航; 崔涛; 焦斌

    2007-01-01

    The rapid growth of internet is causing another industrial revolution. Developing E-business is necessary for Chinese airlines to keep their competitive advantages. It is quite urgent for China Southern Airlines to enlarge and improve its E-business strategies so that it can consolidate its leading position in this market segment.

  17. Toxoplasma gondii infections in sheep in Sicily, southern Italy

    DEFF Research Database (Denmark)

    Vesco, G; Buffolano, W; La Chiusa, S;

    2007-01-01

    The aim of the study was to determine the burden of Toxoplasma gondii-infections in sheep in Sicily, southern Italy and the risk factors for infection. Sera from 1961 sheep were collected just before slaughtering from 62 farms located in 8 out of 9 Sicilian administrative districts. The sera were...

  18. Southern Accrediting Agency Takes a Closer Look at College Sports.

    Science.gov (United States)

    Blum, Debra E.

    1995-01-01

    The Southern Association of Colleges and Schools' recommendation that the University of North Carolina at Chapel Hill place the athletics program solidly in the control of the university, rather than the booster organization, signaled the accrediting agency's willingness to crack down on college sports programs. (MSE)

  19. A new species of Fernandezina (Araneae, Palpimanidae from southern Brazil

    Directory of Open Access Journals (Sweden)

    Ricardo Ott

    2014-12-01

    Full Text Available A new species of Fernandezina Birabén, 1951, F. nica sp. nov. is described from Rio Grande do Sul state, in southern Brazil. Fernandezina pulchra Birabén, 1951, is registered for Brazil and a new geographic record in Brazil is presented for F. pelta Platnick, 1975.

  20. First ancient mitochondrial human genome from a prepastoralist southern African.

    Science.gov (United States)

    Morris, Alan G; Heinze, Anja; Chan, Eva K F; Smith, Andrew B; Hayes, Vanessa M

    2014-10-01

    The oldest contemporary human mitochondrial lineages arose in Africa. The earliest divergent extant maternal offshoot, namely haplogroup L0d, is represented by click-speaking forager peoples of southern Africa. Broadly defined as Khoesan, contemporary Khoesan are today largely restricted to the semidesert regions of Namibia and Botswana, whereas archeological, historical, and genetic evidence promotes a once broader southerly dispersal of click-speaking peoples including southward migrating pastoralists and indigenous marine-foragers. No genetic data have been recovered from the indigenous peoples that once sustained life along the southern coastal waters of Africa prepastoral arrival. In this study we generate a complete mitochondrial genome from a 2,330-year-old male skeleton, confirmed through osteological and archeological analysis as practicing a marine-based forager existence. The ancient mtDNA represents a new L0d2c lineage (L0d2c1c) that is today, unlike its Khoe-language based sister-clades (L0d2c1a and L0d2c1b) most closely related to contemporary indigenous San-speakers (specifically Ju). Providing the first genomic evidence that prepastoral Southern African marine foragers carried the earliest diverged maternal modern human lineages, this study emphasizes the significance of Southern African archeological remains in defining early modern human origins. PMID:25212860