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Sample records for black cottonwood populus

  1. The genome of black cottonwood, Populus trichocarpa (Torr.&Gray)

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    Tuskan, G.A.; DiFazio, S.; Jansson, S.; Bohlmann, J.; Grigoriev,I.; Hellsten, U.; Putnam, N.; Ralph, S.; Rombauts, S.; Salamov, A.; Schein, J.; Sterck, L.; Aerts, A.; Bhalerao, R.R.; Bhalerao, R.P.; Blaudez, D.; Boerjan, W.; Brun, A.; Brunner, A.; Busov, V.; Campbell, M.; Carlson, J.; Chalot, M.; Chapman, J.; Chen, G.-L.; Cooper, D.; Coutinho,P.M.; Couturier, J.; Covert, S.; Cronk, Q.; Cunningham, R.; Davis, J.; Degroeve, S.; Dejardin, A.; dePamphillis, C.; Detter, J.; Dirks, B.; Dubchak, I.; Duplessis, S.; Ehiting, J.; Ellis, B.; Gendler, K.; Goodstein, D.; Gribskov, M.; Grimwood, J.; Groover, A.; Gunter, L.; Hamberger, B.; Heinze, B.; Helariutta, Y.; Henrissat, B.; Holligan, D.; Holt, R.; Huang, W.; Islam-Faridi, N.; Jones, S.; Jones-Rhoades, M.; Jorgensen, R.; Joshi, C.; Kangasjarvi, J.; Karlsson, J.; Kelleher, C.; Kirkpatrick, R.; Kirst, M.; Kohler, A.; Kalluri, U.; Larimer, F.; Leebens-Mack, J.; Leple, J.-C.; Locascio, P.; Lou, Y.; Lucas, S.; Martin,F.; Montanini, B.; Napoli, C.; Nelson, D.R.; Nelson, D.; Nieminen, K.; Nilsson, O.; Peter, G.; Philippe, R.; Pilate, G.; Poliakov, A.; Razumovskaya, J.; Richardson, P.; Rinaldi, C.; Ritland, K.; Rouze, P.; Ryaboy, D.; Schmutz, J.; Schrader, J.; Segerman, B.; Shin, H.; Siddiqui,A.; Sterky, F.; Terry, A.; Tsai, C.; Uberbacher, E.; Unneberg, P.; Vahala, J.; Wall, K.; Wessler, S.; Yang, G.; Yin, T.; Douglas, C.; Marra,M.; Sandberg, G.; Van der Peer, Y.; Rokhsar, D.

    2006-09-01

    We report the draft genome of the black cottonwood tree, Populus trichocarpa. Integration of shotgun sequence assembly with genetic mapping enabled chromosome-scale reconstruction of the genome. Over 45,000 putative protein-coding genes were identified. Analysis of the assembled genome revealed a whole-genome duplication event, with approximately 8,000 pairs of duplicated genes from that event surviving in the Populus genome. A second, older duplication event is indistinguishably coincident with the divergence of the Populus and Arabidopsis lineages. Nucleotide substitution, tandem gene duplication and gross chromosomal rearrangement appear to proceed substantially slower in Populus relative to Arabidopsis. Populus has more protein-coding genes than Arabidopsis, ranging on average between 1.4-1.6 putative Populus homologs for each Arabidopsis gene. However, the relative frequency of protein domains in the two genomes is similar. Overrepresented exceptions in Populus include genes associated with disease resistance, meristem development, metabolite transport and lignocellulosic wall biosynthesis.

  2. COMPETITION FROM BLACK COTTONWOOD IN NURSERY CONTAINERS

    Science.gov (United States)

    Cottonwood species (Populus spp.) are weedy in container nursery production throughout much of the U.S. Cottonwood species vary throughout the country, with black cottonwood (Populus trichocarpa Torr. & Gray) predominating Oregon and other parts of the Pacific Northwest U.S. Cottonwood release see...

  3. Molecular and biochemical characterization of the jasmonic acid methyltransferase gene from black cottonwood (Populus trichocarpa)

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    Zhao, Nan [ORNL; Yao, Jianzhuang [University of Tennessee, Knoxville (UTK); Chaiprasongsuk, Minta [University of Tennessee, Knoxville (UTK); Li, Guanglin [University of Tennessee, Knoxville (UTK); Guan, Ju [University of Tennessee, Knoxville (UTK); Tschaplinski, Timothy J [ORNL; Guo, Hong [University of Tennessee, Knoxville (UTK); Chen, Feng [University of Tennessee, Knoxville (UTK)

    2013-01-01

    Methyl jasmonate is a metabolite known to be produced by many plants and has roles in diverse biological processes. It is biosynthesized by the action of S-adenosyl-L-methionine:jasmonic acid carboxyl methyltransferase (JMT), which belongs to the SABATH family of methyltransferases. Herein is reported the isolation and biochemical characterization of a JMT gene from black cottonwood (Populus trichocarpa). The genome of P. trichocarpa contains 28 SABATH genes (PtSABATH1 to PtSABATH28). Recombinant PtSABATH3 expressed in Escherichia coli showed the highest level of activity with jasmonic acid (JA) among carboxylic acids tested. It was therefore renamed PtJMT1. PtJMT1 also displayed activity with benzoic acid (BA), with which the activity was about 22% of that with JA. PtSABATH2 and PtSABATH4 were most similar to PtJMT1 among all PtSABATHs. However, neither of them had activity with JA. The apparent Km values of PtJMT1 using JA and BA as substrate were 175 lM and 341 lM, respectively. Mutation of Ser-153 and Asn-361, two residues in the active site of PtJMT1, to Tyr and Ser respectively, led to higher specific activity with BA than with JA. Homology-based structural modeling indicated that substrate alignment, in which Asn-361 is involved, plays a role in determining the substrate specificity of PtJMT1. In the leaves of young seedlings of black cottonwood, the expression of PtJMT1 was induced by plant defense signal molecules methyl jasmonate and salicylic acid and a fungal elicitor alamethicin, suggesting that PtJMT1 may have a role in plant defense against biotic stresses. Phylogenetic analysis suggests that PtJMT1 shares a common ancestor with the Arabidopsis JMT, and functional divergence of these two apparent JMT orthologs has occurred since the split of poplar and Arabidopsis lineages.

  4. Targeted enrichment of the black cottonwood (Populus trichocarpa gene space using sequence capture

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    Zhou Lecong

    2012-12-01

    Full Text Available Abstract Background High-throughput re-sequencing is rapidly becoming the method of choice for studies of neutral and adaptive processes in natural populations across taxa. As re-sequencing the genome of large numbers of samples is still cost-prohibitive in many cases, methods for genome complexity reduction have been developed in attempts to capture most ecologically-relevant genetic variation. One of these approaches is sequence capture, in which oligonucleotide baits specific to genomic regions of interest are synthesized and used to retrieve and sequence those regions. Results We used sequence capture to re-sequence most predicted exons, their upstream regulatory regions, as well as numerous random genomic intervals in a panel of 48 genotypes of the angiosperm tree Populus trichocarpa (black cottonwood, or ‘poplar’. A total of 20.76Mb (5% of the poplar genome was targeted, corresponding to 173,040 baits. With 12 indexed samples run in each of four lanes on an Illumina HiSeq instrument (2x100 paired-end, 86.8% of the bait regions were on average sequenced at a depth ≥10X. Few off-target regions (>250bp away from any bait were present in the data, but on average ~80bp on either side of the baits were captured and sequenced to an acceptable depth (≥10X to call heterozygous SNPs. Nucleotide diversity estimates within and adjacent to protein-coding genes were similar to those previously reported in Populus spp., while intergenic regions had higher values consistent with a relaxation of selection. Conclusions Our results illustrate the efficiency and utility of sequence capture for re-sequencing highly heterozygous tree genomes, and suggest design considerations to optimize the use of baits in future studies.

  5. Preemergence Control of Black Cottonwood in Nursery Containers

    Science.gov (United States)

    Two experiments were conducted to evaluate preemergence herbicides for control of black cottonwood (Populus trichocarpa) in nursery containers. In 2006, granular preemergence herbicides were applied to recently filled, weed-free containers in May just prior to seed release from mature cottonwood tr...

  6. Partitioning of Multivariate Phenotypes using Regression Trees Reveals Complex Patterns of Adaptation to Climate across the Range of Black Cottonwood (Populus trichocarpa

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    Regis Wendpouire Oubida

    2015-03-01

    Full Text Available Local adaptation to climate in temperate forest trees involves the integration of multiple physiological, morphological, and phenological traits. Latitudinal clines are frequently observed for these traits, but environmental constraints also track longitude and altitude. We combined extensive phenotyping of 12 candidate adaptive traits, multivariate regression trees, quantitative genetics, and a genome-wide panel of SNP markers to better understand the interplay among geography, climate, and adaptation to abiotic factors in Populus trichocarpa. Heritabilities were low to moderate (0.13 to 0.32 and population differentiation for many traits exceeded the 99th percentile of the genome-wide distribution of FST, suggesting local adaptation. When climate variables were taken as predictors and the 12 traits as response variables in a multivariate regression tree analysis, evapotranspiration (Eref explained the most variation, with subsequent splits related to mean temperature of the warmest month, frost-free period (FFP, and mean annual precipitation (MAP. These grouping matched relatively well the splits using geographic variables as predictors: the northernmost groups (short FFP and low Eref had the lowest growth, and lowest cold injury index; the southern British Columbia group (low Eref and intermediate temperatures had average growth and cold injury index; the group from the coast of California and Oregon (high Eref and FFP had the highest growth performance and the highest cold injury index; and the southernmost, high-altitude group (with high Eref and low FFP performed poorly, had high cold injury index, and lower water use efficiency. Taken together, these results suggest variation in both temperature and water availability across the range shape multivariate adaptive traits in poplar.

  7. Partitioning of multivariate phenotypes using regression trees reveals complex patterns of adaptation to climate across the range of black cottonwood (Populus trichocarpa).

    Science.gov (United States)

    Oubida, Regis W; Gantulga, Dashzeveg; Zhang, Man; Zhou, Lecong; Bawa, Rajesh; Holliday, Jason A

    2015-01-01

    Local adaptation to climate in temperate forest trees involves the integration of multiple physiological, morphological, and phenological traits. Latitudinal clines are frequently observed for these traits, but environmental constraints also track longitude and altitude. We combined extensive phenotyping of 12 candidate adaptive traits, multivariate regression trees, quantitative genetics, and a genome-wide panel of SNP markers to better understand the interplay among geography, climate, and adaptation to abiotic factors in Populus trichocarpa. Heritabilities were low to moderate (0.13-0.32) and population differentiation for many traits exceeded the 99th percentile of the genome-wide distribution of FST, suggesting local adaptation. When climate variables were taken as predictors and the 12 traits as response variables in a multivariate regression tree analysis, evapotranspiration (Eref) explained the most variation, with subsequent splits related to mean temperature of the warmest month, frost-free period (FFP), and mean annual precipitation (MAP). These grouping matched relatively well the splits using geographic variables as predictors: the northernmost groups (short FFP and low Eref) had the lowest growth, and lowest cold injury index; the southern British Columbia group (low Eref and intermediate temperatures) had average growth and cold injury index; the group from the coast of California and Oregon (high Eref and FFP) had the highest growth performance and the highest cold injury index; and the southernmost, high-altitude group (with high Eref and low FFP) performed poorly, had high cold injury index, and lower water use efficiency. Taken together, these results suggest variation in both temperature and water availability across the range shape multivariate adaptive traits in poplar. PMID:25870603

  8. Taxonomy Icon Data: black cottonwood [Taxonomy Icon

    Lifescience Database Archive (English)

    Full Text Available NL.png Populus_trichocarpa_S.png Populus_trichocarpa_NS.png http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i...=Populus+trichocarpa&t=L http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Populus+trichocarpa&t=NL http://biosciencedbc.jp/taxonomy..._icon/icon.cgi?i=Populus+trichocarpa&t=S http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Populus+trichocarpa&t=NS ...

  9. Cottonwood Control in Nursery Containers

    Science.gov (United States)

    An experiment was conducted to evaluate preemergence herbicides for control of black cottonwood (Populus trichocarpa) in nursery containers. In 2006, granular preemergence herbicides were applied to recently filled, weed-free containers. In May 2006, containers were infested with cottonwood seed b...

  10. Dendroclimatic potential of plains cottonwood (Populus deltoides subsp. monilifera) from the Northern Great Plains, USA

    Science.gov (United States)

    Edmonson, Jesse; Friedman, Jonathan; Meko, David; Touchan, Ramzi; Scott, Julian; Edmonson, Alan

    2014-01-01

    A new 368-year tree-ring chronology (A.D. 1643–2010) has been developed in western North Dakota using plains cottonwood (Populus deltoides subsp. monilifera) growing on the relatively undisturbed floodplain of the Little Missouri River in the North Unit of Theodore Roosevelt National Park. We document many slow-growing living trees between 150–370 years old that contradict the common understanding that cottonwoods grow fast and die young. In this northern location, cottonwood produces distinct annual rings with dramatic interannual variability that strongly crossdate. The detrended tree-ring chronology is significantly positively correlated with local growing season precipitation and soil moisture conditions (r  =  0.69). This time series shows periods of prolonged low radial tree growth during the known droughts of the instrumental record (e.g. 1931–1939 and 1980–1981) and also during prehistory (e.g. 1816–1823 and 1856–1865) when other paleoclimate studies have documented droughts in this region. Tree rings of cottonwood will be a useful tool to help reconstruct climate, streamflow, and the floodplain history of the Little Missouri River and other northern river systems.

  11. Evapotranspiration in a cottonwood (Populus fremontii) restoration plantation estimated by sap flow and remote sensing methods

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    Nagler, P.; Jetton, A.; Fleming, J.; Didan, K.; Glenn, E.; Erker, J.; Morino, K.; Milliken, J.; Gloss, S.

    2007-01-01

    Native tree plantations have been proposed for the restoration of wildlife habitat in human-altered riparian corridors of western U.S. rivers. Evapotranspiration (ET) by riparian vegetation is an important, but poorly quantified, term in river water budgets. Native tree restoration plots will potentially increase ET. We used sap flow sensors and satellite imagery to estimate ET in a 8 ha, cottonwood (Populus fremontii) restoration plot on the Lower Colorado River. Biometric methods were used to scale leaf area to whole trees and stands of trees. This technique was used to validate our estimates of ET obtained by scaling from branch level to stand (or plot) level measurements of ET. Cottonwood trees used 6-10 mm day-1 of water during the peak of the growing season as determined by sap flow sensors, and annual rates scaled by time-series MODIS satellite imagery were approximately 1.2 m year-1. Although irrigation was not quantified, the field had been flood irrigated at 2 week intervals during the 3 years prior to the study, receiving approximately 2 m year-1 of water. A frequency-domain electromagnetic induction survey of soil moisture content showed that the field was saturated (26-28% gravimetric water content) at the 90-150 cm soil depth under the field. Trees were apparently rooted into the saturated soil, and considerable saving of water could potentially be achieved by modifying the irrigation regime to take into account that cottonwoods are phreatophytes. The study showed that cottonwood ET can be monitored by remote sensing methods calibrated with ground measurements with an accuracy or uncertainty of 20-30% in western riparian corridors. ?? 2007 Elsevier B.V. All rights reserved.

  12. Flow regime effects on mature Populus fremontii (Fremont cottonwood) productivity on two contrasting dryland river floodplains

    Science.gov (United States)

    Andersen, Douglas C.

    2016-01-01

    I compared riparian cottonwood (Populus fremontii) productivity-discharge relationships in a relictual stand along the highly regulated Green River and in a naturally functioning stand along the unregulated Yampa River in semiarid northwest Colorado. I used multiple regression to model flow effects on annual basal area increment (BAI) from 1982 to 2011, after removing any autocorrelation present. Each BAI series was developed from 20 trees whose mean size (67 cm diameter at breast height [DBH]) was equivalent in the two stands. BAI was larger in the Yampa River stand except in 2 y when defoliating leaf beetles were present there. I found no evidence for a Yampa flood-magnitude threshold above which BAI declined. Flow variables explained ∼45% of residual BAI variability, with most explained by current-year maximum 90-d discharge (QM90) in the Yampa River stand and by a measure of the year-to-year change in QM90 in the Green River stand. The latter reflects a management-imposed ceiling on flood magnitude—Flaming Gorge Dam power plant capacity—infrequently exceeded during the study period. BAI in the relictual stand began to trend upward in 1992 when flows started to mimic a natural flow regime. Mature Fremont cottonwoods appear to be ecologically resilient. Their productivity along regulated rivers might be optimized using multiyear environmental flow designs.

  13. Genetic improvement and evaluation of black cottonwood for short- rotation biomass production. Final report, 1987--1992

    Energy Technology Data Exchange (ETDEWEB)

    Stettler, R.F.; Hinckley, T.M. [Washington Univ., Seattle, WA (United States). Coll. of Forest Resources; Heilman, P.E. [Washington State Univ., Puyallup, WA (United States). Research and Extension Center; Bradshaw, H.D. Jr. [Washington Univ., Seattle, WA (United States). Dept. of Biochemistry

    1993-04-30

    This project was initiated in 1978 to serve three objectives: (1) develop genetically improved poplar cultivars offering increased productivity under short-rotation culture; (2) identify the major components of productivity in poplar and determine ways in which they can be manipulated, genetically and culturally; and (3) engage in technology transfer to regional industry and agencies so as to make poplar culture in the Pacific Northwest economically feasible. The project is aimed at capturing natural variation in the native black cottonwood. Populus trichocarpa T & G, and enhancing it through selective breeding. Major emphasis has been placed on hybridization of black cottonwood with P deltoides and P maximowiczii, more recently with p nigra. First-generation (F{sub 1}) hybrids have consistently outperformed black cottonwood by a factor of 1.5.-2. The high yields of woody biomass obtained from these clonally propagated hybrids, in rotations of 4-7 years, have fostered the establishment of large-scale plantations by the pulp and paper industry in the region. Physiological studies have helped to elucidate hybrid superiority and several of the underlying mechanisms.

  14. Germination and establishment of the native plains cottonwood (Populus deltoides Marshall subsp. monilifera) and the exotic Russian-olive (Elaeagnus angustifolia L.)

    Science.gov (United States)

    Shafroth, Patrick B.; Auble, Gregor T.; Scott, Michael L.

    1995-01-01

    Russian-olive (Elaeagnus angustifolia) is a small Eurasian tree that has escaped from cultivation and become naturalized, primarily along watercourses throughout the western United States. We examined germination and establishment of Russian-olive and plains cottonwood (Populus deltoides), the principal native riparian tree of the Great Plains, under a range of experimental moisture and light conditions. The fewest seedings established under the driest conditions; seedling biomass was predictably lower in the shade; root-to-shoot ratios were higher for cottonwood, higher in the sun, and higher under drier conditions. Several interactions were also significant. The timing of germination and mortality varied between plains cottonwood and Russian-olive: cottonwood germinated in mid-June in all treatments in a single pulse with subsequent mortality; the timing and amount of Russian-olive germination differed substantially across treatments with little net mortality. Differences in life-history traits of these species, including seed size, viability, and dispersal, help explain treatment differences. Russian-olive will likely remain an important component of riparian communities along both unregulated and regulated western rivers because it succeeds under conditions optimal for cottonwood establishment and under many conditions unfavorable for cottonwood. Furthermore, many western states still encourage planting of Russian-olive, and control techniques tend to be labor-intensive and expensive.

  15. The influence of alternative plant propagation and stand establishment techniques on survival and growth of eastern cottonwood (Populus deltoides Bartr.) clones.

    Energy Technology Data Exchange (ETDEWEB)

    Kaczmarek, Donald J.; et. al.,

    2014-02-09

    Four eastern cottonwood clones, including standard operational clone ST66 and three advanced clonal selections were produced and included in a test utilizing five different plant propagation methods. Despite relatively large first-year growth differences among clones, all clones demonstrated similar responses to the treatments and clone 9 cutting treatment interactions were generally non-significant. The effects of changing cutting lengths are consistent with previous studies which indicated the potential for increased plant survival and growth with increased cutting lengths. Differences in stored carbohydrate reserves alone do not appear to completely control first-year growth and development of cuttings. First-year growth of 51 cm long cuttings planted 30.5 cm deep was greater than the same cuttings planted 48 cm deep. Stem form of plants derived from whip-tip propagation did not differ from plants derived from standard, unrooted cuttings. This propagation method offers the potential of far greater production capacity from a cutting orchard and rapid bulk-up of new or limited clones. Stand uniformity assessments suggest that surviving trees of each individual cutting treatment exhibit similar levels of growth variation. Optimization of plantation establishment techniques has the potential to increase growth of young Populus plantations.

  16. Conservation status of white poplar (Populus alba L. and black poplar (Populus nigra L. in the territory of Great War Island

    Directory of Open Access Journals (Sweden)

    Šijačić-Nikolić Mirjana

    2014-01-01

    Full Text Available T he paper describes t he conservation status of white poplar (Populus alba L. and black poplar (Populus nigra L. in the territory of Great War Island. The activities of in situ and ex situ gene pool conservation have been defined in order to preserve and expand the populations of the above species, as carriers of complex wetland forest ecosystems.

  17. Genome-wide association implicates numerous genes and pleiotropy underlying ecological trait variation in natural populations of Populus trichocarpa

    Energy Technology Data Exchange (ETDEWEB)

    McKown, Athena [University of British Columbia, Vancouver; Klapste, Jaroslav [University of British Columbia, Vancouver; Guy, Robert [University of British Columbia, Vancouver; Geraldes, Armando [University of British Columbia, Vancouver; Porth, Ilga [University of British Columbia, Vancouver; Hannemann, Jan [University of Victoria, Canada; Friedmann, Michael [University of British Columbia, Vancouver; Muchero, Wellington [ORNL; Tuskan, Gerald A [ORNL; Ehlting, Juergen [University of Victoria, Canada; Cronk, Quentin [University of British Columbia, Vancouver; El-Kassaby, Yousry [University of British Columbia, Vancouver; Mansfield, Shawn [University of British Columbia, Vancouver; Douglas, Carl [University of British Columbia, Vancouver

    2014-01-01

    To uncover the genetic basis of phenotypic trait variation, we used 448 unrelated wild accessions of black cottonwood (Populus trichocarpa Torr. & Gray) from natural populations throughout western North America. Extensive information from large-scale trait phenotyping (with spatial and temporal replications within a common garden) and genotyping (with a 34K Populus SNP array) of all accessions were used for gene discovery in a genome-wide association study (GWAS).

  18. Expression and molecular evolution of two DREB1 genes in black poplar (Populus nigra.

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    Yanguang Chu

    Full Text Available Environmental stresses such as low temperature, drought, and high salinity significantly affect plant growth and yield. As selective forces, these adverse factors play essential roles in shaping phenotypic variation in plant populations. Black poplar (Populus nigra is an economically and ecologically important forest tree species with widely distributed populations and is thus suitable for experiments detecting evolutionary footprints left by stress. Here, we performed expression and evolutionary analysis of two duplicated DREB A1-subgroup (DREB1 genes, PnDREB68 and PnDREB69, encoding transcription factors that are involved in stress responses. The two genes showed partially overlapping but distinct expression patterns in response to stresses. These genes were strongly and rapidly induced by cold stress in leaves, stems, and roots. In leaf tissue, dehydration stress induced the expression of PnDREB68 but not PnDREB69. PnDREB69 displayed more rapid responses and longer expression durations than PnDREB68 under salt and ABA stress, respectively. Based on single nucleotide polymorphism (SNP analysis, we found significant population genetic differentiation, with a greater FST value (0.09189 for PnDREB69 than for PnDREB68 (0.07743. Nucleotide diversity analysis revealed a two-fold higher πT for PnDREB68 than for PnDREB69 (0.00563 vs. 0.00243, reflecting strong purifying selection acting on the former. The results suggest that positive selection acted on PnDREB69, as evidenced by neutral testing using Tajima's D statistic. The distinct selective forces to which each of the genes was subjected may be associated with expression divergence. Linkage disequilibrium (LD was low for the sequenced region, with a higher level for PnDREB68 than for PnDREB69. Additionally, analysis of the relationship among carbon isotope ratios, SNP classes and gene expression, together with motif and domain analysis, suggested that 14 polymorphisms within the two genes may be

  19. Geochemical peculiarities of black poplar leaves (Populus nigra L.) in the sites with heavy metals intensive fallouts

    Science.gov (United States)

    Yalaltdinova, Albina; Baranovskaya, Natalya; Rikhvanov, Leonid; Matveenko, Irina

    2013-04-01

    The article deals with the content of 28 chemical elements in the leaves ash of black poplar (Populus nigra L.) growing in Ust-Kamenogorsk city area. It is the major industrial center of Kazakhstan Republic on the territory where the industrial giants of non-ferrous metallurgy and nuclear energy are situated. Comparative analysis with the similar data obtained from leaves ash of Populus nigra L. in Tomsk, Ekibastuz, and Pavlodar cities has revealed that in comparison with other urban areas, leaves ash of black poplar (Populus nigra L.) from Ust-Kamenogorsk city is characterized by elevated concentration rates of Ta, U, Zn, Ag, As, Sb, Br, Sr and Na. Within the city, the sites and areas with abnormal contents of typomorphic pollutants have been revealed. In the central part of the city, in the vicinity of lead-zinc plant and Ulba metallurgical plant, the highest concentrations of Ta, U, Zn, Ag, Au, As, Sb, Cr and Fe were marked. In the northeast, where the titanium-magnesium plant is located, elevated concentrations of Br and Sr were stated. Thus, the impact of major city enterprises which are the main sources of heavy metals is reflected in the element composition. Zn, As, Sb, Ag and Au comes from lead-zinc plant and its refinery plants, while Ulba metallurgical plant can be considered source of Ta and U in the environment, producing tantalum and fuel pellets for nuclear power plants. These companies, due to the current objective circumstances, are located in the central part of the city, have a significant negative effect on the environment and form the risk factors for human health.

  20. Black poplar-tree (Populus nigra L.) bark as an alternative indicator of urban air pollution by chemical elements

    International Nuclear Information System (INIS)

    Capabilities of black poplar-tree (Populus nigra L.) bark as a biomonitor of atmospheric air pollution by chemical elements were tested against epiphytic lichens Xanthoria parietina (L.) and Physcia adscendens (Fr.). Concentrations of 40 macro and trace elements were determined using epicadmium and instrumental NAA. The data obtained were processed using non-parametric tests. A good correlation was found between concentrations of majority of elements in bark and lichens. On the accumulation capability bark turned out to be competitive with both lichens examined. The main inorganic components of black poplar-tree bark were revealed. A substrate influence on the concentrations of some elements in epiphytic lichens was established. An optimized procedure of bark pre-irradiation treatment was suggested. (author)

  1. Structure of the genetic diversity in Black poplar (Populus nigra L.) populations across European river systems: consequences for conservation and restoration

    NARCIS (Netherlands)

    Smulders, M.J.M.; Cottrell, J.E.; Lefevre, F.; Schoot, van der J.; Arens, P.F.P.; Vosman, B.; Tabbener, H.E.; Grassi, F.; Fossati, T.; Castiglione, S.; Krystufek, V.; Fluch, S.; Burg, K.; Vornam, B.; Pohl, A.; Gebhardt, K.; Alba, N.; Agúndez, D.; Maestro, C.; Notivol, E.; Volosyanchuck, R.; Pospiskova, M.; Bordacs, S.; Bovenschen, J.; Dam, van B.C.; Koelewijn, H.P.; Halfmaerten, D.; Ivens, B.; Slycken, Van J.; Vanden Broeck, A.; Storme, V.; Boerjan, W.

    2008-01-01

    Black poplar (Populus nigra L.) is a keystone species for riparian ecosystems in Europe. We analysed the structure of genetic diversity of 17 populations from 11 river valleys that are part of seven catchment systems (Danube, Ebro, Elbe, Po, Rhine, Rhone, and Usk) in Europe, in relation to geography

  2. Identification and characterization of CYP79D6v4, a cytochrome P450 enzyme producing aldoximes in black poplar (Populus nigra)

    OpenAIRE

    Irmisch, Sandra; Unsicker, Sybille B; Gershenzon, Jonathan; Köllner, Tobias G.

    2013-01-01

    After herbivore feeding, poplar trees produce complex volatile blends containing terpenes, green leaf volatiles, aromatics, and nitrogen-containing compounds such as aldoximes and nitriles. It has been shown recently that volatile aldoximes released from gypsy moth (Lymantria dispar) caterpillar-damaged black poplar (Populus nigra) trees attract parasitoids that are caterpillar enemies. In western balsam poplar (P. trichocarpa), volatile aldoximes are produced by 2 P450 monooxygenases, CYP79D...

  3. Testing applicability of black poplar (Populus nigra L.) bark to heavy metal air pollution monitoring in urban and industrial regions

    International Nuclear Information System (INIS)

    A comparative study of the capabilities of black poplar-tree (Populus nigra L.) bark as a biomonitor of atmospheric heavy-metal pollution is reported. Performance indicators (concentrations and enrichment factors) of heavy metal bioaccumulation of bark were compared to the corresponding indicators of epiphytic lichens Xanthoria parietina (L.) Th. Fr. and Physcia adscendens (Fr.) H. Oliver, collected simultaneously with bark samples within the Kiev urban-industrial conurbation. The concentrations of 40 minor and trace elements in the samples were measured by a combination of epithermal and instrumental neutron activation analysis (NAA) using a 10 MW nuclear research reactor WWR-M as the neutron source. Statistical analysis of the data was carried out using non-parametric tests. It was shown that for the majority of the elements determined a good correlation exists between their concentrations in bark and in the lichen species. The accumulation capability of the bark was found to be as effective as, and in some cases better, for both types of lichens. Based on the background levels and variations of the elemental concentration in black poplar-tree bark, threshold values for the enrichment factors were established. For a number of elements (As, Au, Ce, Co, Cr, Cu, La, Mn, Mo, Ni, Sb, Sm, Ti, Th, U, V, W) an interspecies calibration was performed. An optimized pre-irradiation treatment of the bark sample was employed which efficiently separated the most informative external layer from the deeper layers of the bark and thus minimized variations of the element concentrations. Results of this study support black poplar-tree bark as an alternative to epiphytic lichens for heavy metal air pollution monitoring in urban and industrial regions, where severe environmental conditions may result in scarcity or even lack of the indicator species

  4. Adaptive mechanisms and genomic plasticity for drought tolerance identified in European black poplar (Populus nigra L.).

    Science.gov (United States)

    Viger, Maud; Smith, Hazel K; Cohen, David; Dewoody, Jennifer; Trewin, Harriet; Steenackers, Marijke; Bastien, Catherine; Taylor, Gail

    2016-07-01

    Summer droughts are likely to increase in frequency and intensity across Europe, yet long-lived trees may have a limited ability to tolerate drought. It is therefore critical that we improve our understanding of phenotypic plasticity to drought in natural populations for ecologically and economically important trees such as Populus nigra L. A common garden experiment was conducted using ∼500 wild P. nigra trees, collected from 11 river populations across Europe. Phenotypic variation was found across the collection, with southern genotypes from Spain and France characterized by small leaves and limited biomass production. To examine the relationship between phenotypic variation and drought tolerance, six genotypes with contrasting leaf morphologies were subjected to a water deficit experiment. 'North eastern' genotypes were collected at wet sites and responded to water deficit with reduced biomass growth, slow stomatal closure and reduced water use efficiency (WUE) assessed by Δ(13)C. In contrast, 'southern' genotypes originating from arid sites showed rapid stomatal closure, improved WUE and limited leaf loss. Transcriptome analyses of a genotype from Spain (Sp2, originating from an arid site) and another from northern Italy (Ita, originating from a wet site) revealed dramatic differences in gene expression response to water deficit. Transcripts controlling leaf development and stomatal patterning, including SPCH, ANT, ER, AS1, AS2, PHB, CLV1, ERL1-3 and TMM, were down-regulated in Ita but not in Sp2 in response to drought. PMID:27174702

  5. An increase in herbivory of cottonwood in yellowstone national park

    Science.gov (United States)

    Keigley, R.B.

    1997-01-01

    This study examined an effect of elk (Cervus elaphus nelsoni) on narrowleaf cottonwood (Populus angustifolia) in northern Yellowstone National Park, where stands consist of old trees and younger, densely-branched bushes. The elk herd increased from a census of 3,172 in 1968 to a census of 18,913 in 1988. The purposes of this study were to: 1) document the height-growth of cottonwood bushes, 2) determine if the height of browsing corresponded with snow depth, and 3) determine if there has been a recent increase in cottonwood herbivory. In 5 stands of different age (ranging ca. 9-45 y old), I measured the height of live previous-year-growth and the height of the oldest stems killed by browsing. The tallest previous-year-growth was 80 cm; all stems taller than 29 cm had been browsed. Stems were killed by browsing closer to the ground in younger stands (respectively, 87, 62, 28, 14, and 9 cm; P herbivory since respective stand creation. The large variances in the height of browse-killed stems in older stands (745, 399, and 291 cm2) were likely caused by an initial period of light-to-moderate herbivory followed by an increase in herbivory that killed the stem tips at the heights existing at the time. The bush growth-form apparently results from an increase in herbivory that occurred between 1968 and 1977, a period in which the elk winter census increased from 3,172 to 8,981. The weight of evidence suggests that EuroAmerican influences have caused the northern elk herd to increase in number since the establishment of the park. If herbivory does not decrease, cottonwood may be eliminated from Yellowstone's northern range.

  6. Gas exchange characteristics of Populus trichocarpa, Populus deltoides and Populus trichocarpa x P. deltoides clones.

    Science.gov (United States)

    Bassman, J H; Zwier, J C

    1991-03-01

    of the eastern Washington clone of P. trichocarpa; and (3) introducing eastern Washington clones of black cottonwood into breeding programs is likely to yield lines with favorable growth characteristics combined with enhanced WUE and adaptation to soil water deficits. PMID:14972886

  7. Phytoremediation of trichloroethene (TCE) using cottonwood trees

    Science.gov (United States)

    Jones, S.A.; Lee, R.W.; Kuniansky, E.L.; ,

    1999-01-01

    The ability of cottonwood trees for phytoremediation was studied on aerobic shallow groundwater containing TCE. Cottonwood trees were planted over a 0.2-ha area at the Naval Air Station at Fort Worth, TX, in April 1996. Two years later, groundwater chemistry in the terrace alluvial aquifer was changing locally. Dissolved oxygen (DO) concentrations declined at the southern end of the whip plantings while total iron concentration increased. Groundwater chemistry near a mature cottonwood tree ~ 60 m from the caliper trees was different from that observed elsewhere. Anaerobic conditions near the mature cottonwood tree were evident. Reductive dechlorination of TCE occurred in the aquifer near the mature tree, as demonstrated by very small concentration of TCE in groundwater, a small median ratio of TCE to the degradation product cis-1,2-DCE and the presence of vinyl chloride.

  8. Evolutionary Quantitative Genomics of Populus trichocarpa.

    Directory of Open Access Journals (Sweden)

    Ilga Porth

    Full Text Available Forest trees generally show high levels of local adaptation and efforts focusing on understanding adaptation to climate will be crucial for species survival and management. Here, we address fundamental questions regarding the molecular basis of adaptation in undomesticated forest tree populations to past climatic environments by employing an integrative quantitative genetics and landscape genomics approach. Using this comprehensive approach, we studied the molecular basis of climate adaptation in 433 Populus trichocarpa (black cottonwood genotypes originating across western North America. Variation in 74 field-assessed traits (growth, ecophysiology, phenology, leaf stomata, wood, and disease resistance was investigated for signatures of selection (comparing QST-FST using clustering of individuals by climate of origin (temperature and precipitation. 29,354 SNPs were investigated employing three different outlier detection methods and marker-inferred relatedness was estimated to obtain the narrow-sense estimate of population differentiation in wild populations. In addition, we compared our results with previously assessed selection of candidate SNPs using the 25 topographical units (drainages across the P. trichocarpa sampling range as population groupings. Narrow-sense QST for 53% of distinct field traits was significantly divergent from expectations of neutrality (indicating adaptive trait variation; 2,855 SNPs showed signals of diversifying selection and of these, 118 SNPs (within 81 genes were associated with adaptive traits (based on significant QST. Many SNPs were putatively pleiotropic for functionally uncorrelated adaptive traits, such as autumn phenology, height, and disease resistance. Evolutionary quantitative genomics in P. trichocarpa provides an enhanced understanding regarding the molecular basis of climate-driven selection in forest trees and we highlight that important loci underlying adaptive trait variation also show

  9. Cavity turnover and equilibrium cavity densities in a cottonwood bottomland

    Science.gov (United States)

    Sedgwick, James A.; Knopf, Fritz L.

    1992-01-01

    A fundamental factor regulating the numbers of secondary cavity nesting (SCN) birds is the number of extant cavities available for nesting. The number of available cavities may be thought of as being in an approximate equilibrium maintained by a very rough balance between recruitment and loss of cavities. Based on estimates of cavity recruitment and loss, we ascertained equilibrium cavity densities in a mature plains cottonwood (Populus sargentii) bottomland along the South Platte River in northeastern Colorado. Annual cavity recruitment, derived from density estimates of primary cavity nesting (PCN) birds and cavity excavation rates, was estimated to be 71-86 new cavities excavated/100 ha. Of 180 active cavities of 11 species of cavity-nesting birds found in 1985 and 1986, 83 were no longer usable by 1990, giving an average instantaneous rate of cavity loss of r = -0.230. From these values of cavity recruitment and cavity loss, equilibrium cavity density along the South Platte is 238-289 cavities/100 ha. This range of equilibrium cavity density is only slightly above the minimum of 205 cavities/100 ha required by SCN's and suggests that cavity availability may be limiting SCN densities along the South Platte River. We submit that snag management alone does not adequately address SCN habitat needs, and that cavity management, expressed in terms of cavity turnover and cavity densities, may be more useful.

  10. Chemical and physical properties of two-year short-rotation deciduous species. [Olea sp. , Populus deltoides, Platanus sp. , Alnus glutinosa, Paulownia tomentosa, Robina pseudoacacia, Acer saccharinum

    Energy Technology Data Exchange (ETDEWEB)

    Lee, C.S

    1982-01-01

    The following seven broadleaved species were tested: autumn olive (Olea sp.) eastern cottonwood (Populus deltoides), sycamore (Platanus species), black alder (Alnus glutinosa), royal paulownia (Paulownia tomentosa), black locust (Robina pseudoacacia) and silver maple (Acer saccharinum). The species and portions both significantly affected the chemical and the physical findings of the juvenile wood. The ages, which were tested in factorial combination with the species, also showed a significant effect on both the chemical and the physical properties of wood. All of the results indicated that both chemical and physical properties did vary with species, among the portions of the wood, and according to the ages of the wood. From the portion standpoint, the bark had higher gross heat content, sulphur content, ash content and lignin content, and it was also higher in all three kinds of extractives contents. The wood portion was found to be rich in holocellulose, alpha-cellulose and pentosan. In considering the chemical and physical properties of juvenile wood among the species, eastern cottonwood was found to have the highest value for ash content and all of the three kinds of extractives content. Paulownia had the highest value for sulphur content. Black locust had highest gross heat content, holocellulose and alpha-cellulose contents. Silver maple had highest lignin content. Results from this study showed that these seven juvenile hardwood species can produce high biomass yields of fibre and energy when grown under intensive care in central and southern Illinois sites. The best species of these seven tested woods seem to be black locust, which could also serve as a raw material for the pulp and paper industry, as well as for a fuel for energy generation. However, further economic and energy efficiency analyses are needed before judging the feasibility of these short-rotation juvenile hardwood species.

  11. Identifying data gaps and prioritizing restoration strategies for Fremont cottonwood using linked geomorphic and population models

    Science.gov (United States)

    Harper, E. B.; Stella, J. C.; Fremier, A. K.

    2009-12-01

    Fremont cottonwood (Populus fremontii) is an important component of semi-arid riparian ecosystems throughout western North America, but its populations are in decline due to flow regulation. Achieving a balance between human resource needs and riparian ecosystem function requires a mechanistic understanding of the multiple geomorphic and biological factors affecting tree recruitment and survival, including the timing and magnitude of river flows, and the concomitant influence on suitable habitat creation and mortality from scour and sedimentation burial. Despite a great deal of empirical research on some components of the system, such as factors affecting cottonwood recruitment, other key components are less studied. Yet understanding the relative influence of the full suite of physical and life-history drivers is critical to modeling whole-population dynamics under changing environmental conditions. We addressed these issues for the Fremont cottonwood population along the Sacramento River, CA using a sensitivity analysis approach to quantify uncertainty in parameters on the outcomes of a patch-based, dynamic population model. Using a broad range of plausible values for 15 model parameters that represent key physical, biological and climatic components of the ecosystem, we ran 1,000 population simulations that consisted of a subset of 14.3 million possible combinations of parameter estimates to predict the frequency of patch colonization and total forest habitat predicted to occur under current hydrologic conditions after 175 years. Results indicate that Fremont cottonwood populations are highly sensitive to the interactions among flow regime, sedimentation rate and the depth of the capillary fringe (Fig. 1). Estimates of long-term floodplain sedimentation rate would substantially improve model accuracy. Spatial variation in sediment texture was also important to the extent that it determines the depth of the capillary fringe, which regulates the availability of

  12. Climate and flow variation revealed in tree rings of riparian cottonwood, western North Dakota, USA

    Science.gov (United States)

    Friedman, J. M.; Edmondson, J. R.; Meko, D. M.; Touchan, R.; Griffin, E. R.; Zhou, H.

    2014-12-01

    In the western Great Plains, where old upland trees are scarce, rings of riparian trees provide an important opportunity for reconstructing past river flow and climate. We present data from 489 plains cottonwood (Populus deltoides ssp. monilifera) trees along the Little Missouri River in western North Dakota. The trees are in randomly selected flood-plain locations within the North and South units of Theodore Roosevelt National Park. The two sites are separated by 160 river km. The Little Missouri watershed contains foothills but no mountains, and most annual high flows result from snowmelt in March or April. Cores were collected and processed using standard dendrochronological methods. The effect of tree age was removed from the chronology using a single relation for the site as a whole (age-curve standardization), which preserves century-scale variation. Trees were as old as 371 years. Given that cottonwood establishment depends upon channel migration, abundant establishment from 1864-1891 at both sites suggests that one or more large floods occurred prior to this period. At the North Unit, establishment continued at a lower rate during the next century, but upstream at the South Unit, tree establishment was greatly curtailed after the 1800s. Comparison of General Land Office Maps from 1907 to recent satellite imagery confirms that channel migration in the last century was much greater within the North Unit, a difference caused in part by a downstream increase in flood amplification by ice jamming. Ring widths show that even on the flood plain riparian trees were chronically drought stressed. At both sites growth was strongly positively correlated with flow and precipitation and weakly negatively correlated with temperature. Growth was most strongly correlated with flow and precipitation in April-July, which is consistent with dendrometer-band measurements showing growth cessation in August. Whereas cottonwood establishment decreased in the 1900s, ring widths

  13. A 34K SNP genotyping array for Populus trichocarpa: design, application to the study of natural populations and transferability to other Populus species

    Energy Technology Data Exchange (ETDEWEB)

    Geraldes, Armando [University of British Columbia, Vancouver; Hannemann, Jan [University of Victoria, Canada; Grassa, Chris [University of British Columbia, Vancouver; Farzaneh, Nima [University of British Columbia, Vancouver; Porth, Ilga [University of British Columbia, Vancouver; McKown, Athena [University of British Columbia, Vancouver; Skyba, Oleksandr [University of British Columbia, Vancouver; Li, Eryang [University of British Columbia, Vancouver; Mike, Fujita [University of British Columbia, Vancouver; Friedmann, Michael [University of British Columbia, Vancouver; Wasteneys, Geoffrey [University of British Columbia, Vancouver; Guy, Robert [University of British Columbia, Vancouver; El-Kassaby, Yousry [University of British Columbia, Vancouver; Mansfield, Shawn [University of British Columbia, Vancouver; Cronk, Quentin [University of British Columbia, Vancouver; Ehlting, Juergen [University of Victoria, Canada; Douglas, Carl [University of British Columbia, Vancouver; DiFazio, Stephen P [West Virginia University, Morgantown; Slavov, Gancho [West Virginia University, Morgantown; Ranjan, Priya [ORNL; Muchero, Wellington [ORNL; Gunter, Lee E [ORNL; Wymore, Ann [ORNL; Tuskan, Gerald A [ORNL; Martin, Joel [U.S. Department of Energy, Joint Genome Institute; Schackwitz, Wendy [U.S. Department of Energy, Joint Genome Institute; Pennacchio, Christa [U.S. Department of Energy, Joint Genome Institute; Rokhsar, Daniel [U.S. Department of Energy, Joint Genome Institute

    2013-01-01

    Genetic mapping of quantitative traits requires genotypic data for large numbers of markers in many individuals. Despite the declining costs of genotyping by sequencing, for most studies, the use of large SNP genotyping arrays still offers the most cost-effective solution for large-scale targeted genotyping. Here we report on the design and performance of a SNP genotyping array for Populus trichocarpa (black cottonwood). This genotyping array was designed with SNPs pre-ascertained in 34 wild accessions covering most of the species range. Due to the rapid decay of linkage disequilibrium in P. trichocarpa we adopted a candidate gene approach to the array design that resulted in the selection of 34,131 SNPs, the majority of which are located in, or within 2 kb, of 3,543 candidate genes. A subset of the SNPs (539) was selected based on patterns of variation among the SNP discovery accessions. We show that more than 95% of the loci produce high quality genotypes and that the genotyping error rate for these is likely below 2%, indicating that high-quality data are generated with this array. We demonstrate that even among small numbers of samples (n=10) from local populations over 84% of loci are polymorphic. We also tested the applicability of the array to other species in the genus and found that due to ascertainment bias the number of polymorphic loci decreases rapidly with genetic distance, with the largest numbers detected in other species in section Tacamahaca (P. balsamifera and P. angustifolia). Finally, we provide evidence for the utility of the array for intraspecific studies of genetic differentiation and for species assignment and the detection of natural hybrids.

  14. Cottonwood data collection protocol : Great Sand Dunes National Park : Elk/Bison grazing ecology study

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — This protocol/SOP is from USGS to estimate percent consumption of cottonwood saplings, seedlings, and resprouts and recruitment rates of cottonwood subjected to...

  15. Ambrosia Beetle (Coleoptera: Scolytidae) Species, Flight, and Attack on Living Eastern Cottonwood Trees.

    Energy Technology Data Exchange (ETDEWEB)

    Coyle, D R; D.C. Booth: M.S. Wallace

    2005-12-01

    ABSTRACT In spring 2002, ambrosia beetles (Coleoptera: Scolytidae) infested an intensively managed 22-ha tree plantation on the upper coastal plain of South Carolina. Nearly 3,500 scolytids representing 28 species were captured in ethanol-baited traps from 18 June 2002 to 18 April 2004. More than 88% of total captures were exotic species. Five species [Dryoxylon onoharaensum (Murayama), Euwallacea validus (Eichhoff), Pseudopityophthorus minutissimus (Zimmermann), Xyleborus atratus Eichhoff, and Xyleborus impressus Eichhoff]) were collected in South Carolina for the first time. Of four tree species in the plantation, eastern cottonwood, Populus deltoides Bartram, was the only one attacked, with nearly 40% of the trees sustaining ambrosia beetle damage. Clone ST66 sustained more damage than clone S7C15. ST66 trees receiving fertilization were attacked more frequently than trees receiving irrigation, irrigation_fertilization, or controls, although the number of S7C15 trees attacked did not differ among treatments. The study location is near major shipping ports; our results demonstrate the necessity for intensive monitoring programs to determine the arrival, spread, ecology, and impact of exotic scolytids.

  16. The response of male and female black poplar (Populus nigra L. subspecies betulifolia (Pursh) W. Wettst.) cuttings to different water table depths and sediment types: implications for flow management and river corridor biodiversity

    Science.gov (United States)

    Hughes, Francine M. R.; Barsoum, Nadia; Richards, Keith S.; Winfield, Mark; Hayes, Adrian

    2000-10-01

    Management of river flows has altered the pattern of flood arrival times and reduced their frequency and duration on many European floodplains. Floodplain tree species depend on floods both to provide new sites for their regeneration and to recharge water tables at various depths in the rooting zone. A reduction in floods is one factor that has led to loss of river corridor biodiversity, with early successional tree species from the Salicaceae being particularly adversely affected. Members of the Salicaceae are dioecious and it is possible that the males and females of these species have measurably different water table requirements, which might lead to spatial segregation of the sexes on a floodplain. This paper describes an investigation that was carried out into the response of male and female black poplar (Populus nigra L. subspecies betulifolia (Pursh) W. Wettst.) to different soil moisture conditions. An experiment was set up on an alluvial island in the River Great Ouse (UK) in which cuttings of male and female black poplar were grown in different sediment types with different water table levels. The experiment was carried out over two field seasons in 1997 and 1998. Results showed that females tended to prefer wetter and more nutrient-rich sites than males but that there was considerable overlap in their requirements. A complementary genetic study showed very little genetic variation in the experimental population, which may also partially explain the relatively low level of variation between the two sexes found in the study. It is suggested that some limited spatial segregation of the sexes does occur in response to soil moisture availability and that river flow management which aims to maintain or increase river corridor biodiversity may need to take this into account.

  17. Dynamic DNA cytosine methylation in the Populus trichocarpa genome: tissue-level variation and relationship to gene expression

    Directory of Open Access Journals (Sweden)

    Vining Kelly J

    2012-01-01

    Full Text Available Abstract Background DNA cytosine methylation is an epigenetic modification that has been implicated in many biological processes. However, large-scale epigenomic studies have been applied to very few plant species, and variability in methylation among specialized tissues and its relationship to gene expression is poorly understood. Results We surveyed DNA methylation from seven distinct tissue types (vegetative bud, male inflorescence [catkin], female catkin, leaf, root, xylem, phloem in the reference tree species black cottonwood (Populus trichocarpa. Using 5-methyl-cytosine DNA immunoprecipitation followed by Illumina sequencing (MeDIP-seq, we mapped a total of 129,360,151 36- or 32-mer reads to the P. trichocarpa reference genome. We validated MeDIP-seq results by bisulfite sequencing, and compared methylation and gene expression using published microarray data. Qualitative DNA methylation differences among tissues were obvious on a chromosome scale. Methylated genes had lower expression than unmethylated genes, but genes with methylation in transcribed regions ("gene body methylation" had even lower expression than genes with promoter methylation. Promoter methylation was more frequent than gene body methylation in all tissues except male catkins. Male catkins differed in demethylation of particular transposable element categories, in level of gene body methylation, and in expression range of genes with methylated transcribed regions. Tissue-specific gene expression patterns were correlated with both gene body and promoter methylation. Conclusions We found striking differences among tissues in methylation, which were apparent at the chromosomal scale and when genes and transposable elements were examined. In contrast to other studies in plants, gene body methylation had a more repressive effect on transcription than promoter methylation.

  18. Changes in carbohydrate metabolism in fine roots of the native European black poplar (Populus nigra L.) in a heavy-metal-polluted environment.

    Science.gov (United States)

    Stobrawa, Krzysztof; Lorenc-Plucińska, Gabriela

    2007-02-01

    Effects of copper-smelter-related deposition of heavy metals in the soil on carbohydrate metabolism of fine roots of the native European black poplar were investigated in spring and autumn. Total soluble non-structural carbohydrates in fine roots from trees growing in the polluted habitat were lower than in a control site, but this was directly associated only with a lower raffinose concentration. Neither glucose nor fructose concentrations differed significantly between polluted and unpolluted sites. In contrast, the galactose concentration was higher in the presence of heavy metals, especially in autumn. Also the stachyose concentration was higher in the polluted site, but only in autumn, suggesting it could be an alternative way of detoxification of galactose. No difference between control and polluted stands was observed in sucrose concentration. However, estimates of sucrolytic activity revealed markedly higher activities of sucrose synthase (SuSy), soluble acid (AI) and neutral (NI) invertases in the polluted stand than in the control. In contrast, the estimated glycolytic enzyme activities were not affected by the presence of heavy metals in soil. PMID:17182084

  19. Measuring and Scaling Evapotranspiration of a Cottonwood Restoration Plot on the Lower Colorado River

    Science.gov (United States)

    Nagler, P. L.; Jetton, A.; Fleming, J. B.; Glenn, E. P.; Erker, J.; Morino, K.; Milliken, J. A.; Gloss, S. P.

    2006-05-01

    Evapotranpsiration (ET) by riparian vegetation is the second largest water user on western U.S. rivers. Efforts are underway to create restoration plots containing native trees such as cottonwood (Populus fremontii) (CW) because they provide valuable wildlife habitat. Up to now, estimates of riparian ET have been based on indirect methods and validation of estimates has been difficult. At Cibola NWR on the Colorado River, we estimated ET for a 20 acre plot of 3 year old CW trees for 50 consecutive days, July 25 - Sept 15, 2005. We measured transpiration rate using sap flow, heat-balance methods to get sap flow on pairs of branches on 20 CW trees. We scaled these ground measurements to high resolution (0.3 m) aerial readings and then to the satellite-level using Landsat ETM+ (30m) and EOS-1 Terra MODIS (250m) pixels. Using regression equations developed in Nagler et al. (2005a,b), we predicted ET at this CW site based on local, maximum air temperatures and ETM+ and MODIS Enhanced Vegetation Index (EVI) data. Sap flow rates ranged from 6 mm d-1 to 10 mm d-1. Results projected by MODIS imagery were similar to rates measured by sap flow sensors. Scaled over the whole plantation, annual ET rates were projected to be 1.33 m yr-1 (4.3 ft yr-1), approximately 50% higher than saltcedar on this river system. We conclude that replacing saltcedar with CW may result in increased water demand and the efficacy in supporting wildlife should be validated before they are widely implemented as a restoration strategy.

  20. Anthropogenic radionuclides and heavy metals in black poplar tree (Populus nigra l.) bark sampled in one of the residential districts of Kyiv

    International Nuclear Information System (INIS)

    Tree bark is known to be a good alternative biological substrate that can be successfully used in the air pollution monitoring studies, especially in urban and industrialized areas suffering from the severe anthropogenic pressure. In Kyiv black poplar is a widespread tree species, whose bark was used as a biological indicator in our research. The bark samples were collected within one of the residential districts of Kyiv and were subject to comprehensive analysis for the content of stable elements and anthropogenic radionuclides. Thermal and epicadmium NAA in short- and long-term irradiation modes, respectively, were used for the determination of concentrations of up to 40 heavy metals, while gamma spectrometry, alpha spectrometry and radiochemical extraction-ion-exchange techniques were applied to determine137Cs, 90Sr, Pu and Am radioactive isotopes in single bark samples. The analytical data obtained were subject to correlation and factor analysis, which revealed basic air pollution sources in the investigated region. It was shown that no significant correlations exist between radionuclides and any determined stable elements in the analyzed samples. All measured radioactive isotopes turned out to fall into a separate factor, which is believed to present the direct deposition of fuel microparticles from the Chernobyl NPP's Unit 4 from the atmosphere into the substratum during radioactive fallouts in spring 1986. This conclusion was supported by the evaluated isotopic ratios 137Cs/90Sr = 1.1 ± 0.4, 137Cs/239+240Pu = 100 ± 40, 239+240Pu/238Pu = 1.0 ± 0.6, as well as by the observed significant variation of the radionuclide concentrations (e.g. 10 Bq/kg - 1540 Bq/kg for 137Cs, 0.1 Bq/kg - 21 Bq/kg for 238,240Pu), which is believed to reflect a microparticle character of the pollution. The obtained data suggest that re-suspension does not play a significant role in the formation of atmospheric air pollution by radioactive substances in the investigated region

  1. Sink-source interactions between a galling aphid and its narrowleaf cottonwood host: Within and between plant variation

    International Nuclear Information System (INIS)

    The authors examined within and between plant variation in the capacity of the leaf gallin aphid, Pemphigus betae, to manipulate the sink-source translocation patterns of its host, narrowleaf cottonwood (Populus angustifolia). Within a plant, a series of 14C-labeling experiments showed that P. betae actively manipulated host translocation patterns by acting as a strong sink and fed on assimilates produced in surrounding plant tissues serving as sources. Food resources drawn into the galled leaf from storage tissues in the stem and from surrounding leaves were a major resource for this herbivore in addition to resources from the galled leaf blade. Aphids compete for resources with natural plant sinks, such as developing fruits. In common gardens containing aphid resistant and aphid susceptible clones, I tested the hypothesis that aphid gall success on resistant trees is limited by competition between aphid-induced sinks and the plant's natural sinks, and that the intensity of intraplant competition was determined by the genetically determined architecture of the tree. Through bud removal, a resistant clone could be given the architecture of a susceptible clone. Aphid survival was increased two fold on architecturally modified resistant clones

  2. Artificial cavities enhance breeding bird densities in managed cottonwood forests

    Science.gov (United States)

    Twedt, D.J.; Henne-Kerr, J.L.

    2001-01-01

    The paucity of natural cavities within short-rotation hardwood agroforests restricts occupancy by cavity-nesting birds. However, providing 1.6 artificial nesting cavities (nest boxes)/ha within 3- to 10-year-old managed cottonwood forests in the Mississippi Alluvial Valley increased territory density of cavity-nesting birds. Differences in territory densities between forests with and without nest boxes increased as stands aged. Seven bird species initiated 38 nests in 173 boxes during 1997 and 39 nests in 172 boxes during 1998. Prothonotary warblers (Protonotaria citrea) and eastern bluebirds (Sialia sialis) accounted for 67% of nests; nearly all warbler nests were in 1.8-L, plastic-coated cardboard (paper) boxes, whereas bluebird nests were divided between paper boxes and 3.5-L wooden boxes. Larger-volume (16.5-L) wooden nest boxes were used by eastern screech owls (Otus asio) and great crested flycatchers (Myiarchus crinitus), but this box type often was usurped by honey bees (Apis mellifera). To enhance territory densities of cavity-nesting birds in cottonwood agroforests, we recommend placement of plastic-coated paper nest boxes, at a density of 0.5/ha, after trees are >4 years old but at least 2 years before anticipated timber harvest.

  3. Establishment of Populus deltoides under simulated alluvial groundwater declines

    Science.gov (United States)

    Segelquist, Charles A.; Scott, Michael L.; Auble, Gregor T.

    1993-01-01

    Establishment, growth, and survival of seedlings of Populus deltoides subsp. monilifera (plains cottonwood) were examined in an experimental facility simulating five rates of declining alluvial groundwater. The treatments were permanent saturation, drawdown rates of 0.4, 0.7, 2.9 cm/d and immediate drainage. The experiment was conducted outdoors in planters near Fort Collins, Colorado. Seedling survival was highest under the two slowest drawdown rates and declined significantly with faster drawdown rates. The highest growth rate was associated with the drawdown rate of 0.4 cm/d, in which mean shoot height was 2.4 cm and mean root length was 39 am 98 days after planting. Growth of shoots and roots was reduced both by saturated conditions and by the more rapid drawdown rates of 0.7 and 2.9 cm/d. No establishment was observed in the immediate drawdown treatment. Whereas maximum biomass accumulation is associated with the most gradual drawdown or saturated conditions, seedling establishing naturally under such conditions are also most likely to be removed by ice or subsequent flooding. Seedlings establishing in higher topographic positions, in contrast, are subject to increased mortality and reduced shoot growth, resulting from reduced soil moisture. Rapid root extension following establishment allows P. deltoides seedlings to grow across a wide range of groundwater drawdown rates, and thus a variety of positions across a gradient of riparian soil moisture. Our results indicate that in coarse alluvial sands of low fertility, 47% of germinating P. deltoides seeds were able to survive in associated with a drawdown rate of 2.9 cm/d and a final water table depth of 80 cm.

  4. A systems biology, whole-genome association analysis of the molecular regulation of biomass growth and composition in Populus deltoides

    Energy Technology Data Exchange (ETDEWEB)

    Kirst, Matias [Univ. of Florida, Gainesville, FL (United States)

    2014-04-14

    Poplars trees are well suited for biofuel production due to their fast growing habit, favorable wood composition and adaptation to a broad range of environments. The availability of a reference genome sequence, ease of vegetative propagation and availability of transformation methods also make poplar an ideal model for the study of wood formation and biomass growth in woody, perennial plants. The objective of this project was to conduct a genome-wide association genetics study to identify genes that regulate bioenergy traits in Populus deltoides (eastern cottonwood). Populus deltoides is a genetically diverse keystone forest species in North America and an important short rotation woody crop for the bioenergy industry. We searched for associations between eight growth and wood composition traits and common and low-frequency single-nucleotide polymorphisms (SNPs) detected by targeted resequencing of 18,153 genes in a population of 391 unrelated individuals. To increase power to detect associations with low-frequency variants, multiple-marker association tests were used in combination with single-marker association tests. Significant associations were discovered for all phenotypes and are indicative that low-frequency polymorphisms contribute to phenotypic variance of several bioenergy traits. These polymorphism are critical tools for the development of specialized plant feedstocks for bioenergy.

  5. A systems biology, whole-genome association analysis of the molecular regulation of biomass growth and composition in Populus deltoides

    Energy Technology Data Exchange (ETDEWEB)

    Kirst, Matias [Univ. of Florida, Gainesville, FL (United States)

    2015-04-15

    Poplars trees are well suited for biofuel production due to their fast growing habit, favorable wood composition and adaptation to a broad range of environments. The availability of a reference genome sequence, ease of vegetative propagation and availability of transformation methods also make poplar an ideal model for the study of wood formation and biomass growth in woody, perennial plants. The objective of this project was to conduct a genome-wide association genetics study to identify genes that regulate bioenergy traits in Populus deltoides (eastern cottonwood). Populus deltoides is a genetically diverse keystone forest species in North America and an important short rotation woody crop for the bioenergy industry. We searched for associations between eight growth and wood composition traits and common and low-frequency single-nucleotide polymorphisms (SNPs) detected by targeted resequencing of 18,153 genes in a population of 391 unrelated individuals. To increase power to detect associations with low-frequency variants, multiple-marker association tests were used in combination with single-marker association tests. Significant associations were discovered for all phenotypes and are indicative that low-frequency polymorphisms contribute to phenotypic variance of several bioenergy traits. These polymorphism are critical tools for the development of specialized plant feedstocks for bioenergy.

  6. Genetic Test of New Cottonwood Clones at Nursery Stage

    Institute of Scientific and Technical Information of China (English)

    QINGuanghua; JIANGYuezhong

    2004-01-01

    Twenty-five new clones belong to Populus Aigeiros of both domestic and foreign origin had been introduced and tested at nursery stage in Shandong province. Results showed that height (H),diameter at stem base (DO) and survival rate (SR) varied significantly and genetic variation were very large among the clones. CVg and broad-sense heritability (h2) of H, DO and SR of 1-year-old stock nursery were 7.43%, 9.25%, 18.78% and 78.91%, 96.31%, 95.93%, respectively, showing high genetic control on the tested traits. 11 superior clones with characteristics of high growth rate and medium or high SR were primarily selected and genetic gains (△G) of H, DO and SR were 16.89%, 16.08% and 13.08%, respectively.Rooting habits test of some selected clones were also conducted based on the cutting culture in water container and annual growth increment measured. The date of first root emergence, number of main roots, number of lateral roots, length of main roots and the emergence date of growth peak varied to certain degree among the selected clones.

  7. Clone history shapes Populus drought responses.

    Science.gov (United States)

    Raj, Sherosha; Bräutigam, Katharina; Hamanishi, Erin T; Wilkins, Olivia; Thomas, Barb R; Schroeder, William; Mansfield, Shawn D; Plant, Aine L; Campbell, Malcolm M

    2011-07-26

    Just as animal monozygotic twins can experience different environmental conditions by being reared apart, individual genetically identical trees of the genus Populus can also be exposed to contrasting environmental conditions by being grown in different locations. As such, clonally propagated Populus trees provide an opportunity to interrogate the impact of individual environmental history on current response to environmental stimuli. To test the hypothesis that current responses to an environmental stimulus, drought, are contingent on environmental history, the transcriptome- level drought responses of three economically important hybrid genotypes-DN34 (Populus deltoides × Populus nigra), Walker [P. deltoides var. occidentalis × (Populus laurifolia × P. nigra)], and Okanese [Walker × (P. laurifolia × P. nigra)]-derived from two different locations were compared. Strikingly, differences in transcript abundance patterns in response to drought were based on differences in geographic origin of clones for two of the three genotypes. This observation was most pronounced for the genotypes with the longest time since establishment and last common propagation. Differences in genome-wide DNA methylation paralleled the transcriptome level trends, whereby the clones with the most divergent transcriptomes and clone history had the most marked differences in the extent of total DNA methylation, suggesting an epigenomic basis for the clone history-dependent transcriptome divergence. The data provide insights into the interplay between genotype and environment in the ecologically and economically important Populus genus, with implications for the industrial application of Populus trees and the evolution and persistence of these important tree species and their associated hybrids. PMID:21746919

  8. Protease gene families in Populus and Arabidopsis

    Directory of Open Access Journals (Sweden)

    Jansson Stefan

    2006-12-01

    Full Text Available Abstract Background Proteases play key roles in plants, maintaining strict protein quality control and degrading specific sets of proteins in response to diverse environmental and developmental stimuli. Similarities and differences between the proteases expressed in different species may give valuable insights into their physiological roles and evolution. Results We have performed a comparative analysis of protease genes in the two sequenced dicot genomes, Arabidopsis thaliana and Populus trichocarpa by using genes coding for proteases in the MEROPS database 1 for Arabidopsis to identify homologous sequences in Populus. A multigene-based phylogenetic analysis was performed. Most protease families were found to be larger in Populus than in Arabidopsis, reflecting recent genome duplication. Detailed studies on e.g. the DegP, Clp, FtsH, Lon, rhomboid and papain-Like protease families showed the pattern of gene family expansion and gene loss was complex. We finally show that different Populus tissues express unique suites of protease genes and that the mRNA levels of different classes of proteases change along a developmental gradient. Conclusion Recent gene family expansion and contractions have made the Arabidopsis and Populus complements of proteases different and this, together with expression patterns, gives indications about the roles of the individual gene products or groups of proteases.

  9. Populus transcriptomics : from noise to biology

    OpenAIRE

    Sjödin, Andreas

    2007-01-01

    Mikromatriser handlar numera inte bara om att alstra genuttrycksdata i snabb takt, utan det är minst lika viktigt att effektivt ta hand om informationen efteråt. I den här avhandlingen presenteras ett arbetsflöde för att mäta, lagra och analysera genuttrycksdata i asp och poppel (Populus spp.). En Populus} mikromatrisdatabas - UPSC--BASE - tillgänglig för alla intresserade, utvecklades i syfte att samla in och lagra genuttrycksdata. Flertalet analysverktyg gjordes samtidigt tillgängliga, för ...

  10. Epigenomics of Development in Populus

    Energy Technology Data Exchange (ETDEWEB)

    Strauss, Steve; Freitag, Michael; Mockler, Todd

    2013-01-10

    We conducted research to determine the role of epigenetic modifications during tree development using poplar (Populus trichocarpa), a model woody feedstock species. Using methylated DNA immunoprecipitation (MeDIP) or chromatin immunoprecipitation (ChIP), followed by high-throughput sequencing, we are analyzed DNA and histone methylation patterns in the P. trichocarpa genome in relation to four biological processes: bud dormancy and release, mature organ maintenance, in vitro organogenesis, and methylation suppression. Our project is now completed. We have 1) produced 22 transgenic events for a gene involved in DNA methylation suppression and studied its phenotypic consequences; 2) completed sequencing of methylated DNA from eleven target tissues in wildtype P. trichocarpa; 3) updated our customized poplar genome browser using the open-source software tools (2.13) and (V2.2) of the P. trichocarpa genome; 4) produced summary data for genome methylation in P. trichocarpa, including distribution of methylation across chromosomes and in and around genes; 5) employed bioinformatic and statistical methods to analyze differences in methylation patterns among tissue types; and 6) used bisulfite sequencing of selected target genes to confirm bioinformatics and sequencing results, and gain a higher-resolution view of methylation at selected genes 7) compared methylation patterns to expression using available microarray data. Our main findings of biological significance are the identification of extensive regions of the genome that display developmental variation in DNA methylation; highly distinctive gene-associated methylation profiles in reproductive tissues, particularly male catkins; a strong whole genome/all tissue inverse association of methylation at gene bodies and promoters with gene expression; a lack of evidence that tissue specificity of gene expression is associated with gene methylation; and evidence that genome methylation is a significant impediment to tissue

  11. Evapotranspiration crop coefficients for mixed riparian plant community and transpiration crop coefficients for Common reed, Cottonwood and Peach-leaf willow in the Platte River Basin, Nebraska-USA

    Science.gov (United States)

    Irmak, S.; Kabenge, I.; Rudnick, D.; Knezevic, S.; Woodward, D.; Moravek, M.

    2013-02-01

    SummaryApplication of two-step approach of evapotranspiration (ET) crop coefficients (Kc) to "approximate" a very complex process of actual evapotranspiration (ETa) for field crops has been practiced by water management community. However, the use of Kc, and in particular the concept of growing degree days (GDD) to estimate Kc, have not been sufficiently studied for estimation of evaporative losses from riparian vegetation. Our study is one of the first to develop evapotranspiration crop coefficient (KcET) curves for mixed riparian vegetation and transpiration (TRP) crop coefficients (KcTRP) for individual riparian species as a function GDD through extensive field campaigns conducted in 2009 and 2010 in the Platte River Basin in central Nebraska, USA. KcTRP values for individual riparian vegetation species [Common reed (Phragmites australis), Cottonwood (Populus deltoids) and Peach-leaf willow (Salix amygdaloides)] were quantified from the TRP rates obtained using scaled-up canopy resistance from measured leaf-level stomatal resistance and reference evapotranspiration. The KcET and KcTRP curves were developed for alfalfa-reference (KcrET and KcrTRP) surface. The seasonal average mixed riparian plant community KcrET was 0.89 in 2009 and 1.27 in 2010. In 2009, the seasonal average KcrTRP values for Common reed, Cottonwood and Peach-leaf willow were 0.57, 0.51 and 0.62, respectively. In 2010, the seasonal average KcrTRP were 0.69, 0.62 and 0.83 for the same species, respectively. In general, TRP crop coefficients had less interannual variability than the KcrET. Response of the vegetation to flooding in 2010 played an important role on the interannual variability of KcrET values. We demonstrated good performance and reliability of developed GDD-based KcrTRP curves by using the curves developed for 2009 to predict TRP rates of individual species in 2010. Using the KcrTRP curves developed during the 2009 season, we were able to predict the TRP rates for Common reed

  12. Stomata morphological traits in two different genotypes of Populus nigra L.

    Directory of Open Access Journals (Sweden)

    Russo G

    2015-08-01

    Full Text Available Populus nigra L. (black poplar possesses amphistomatic leaves, with large (giant and normal sized stomata. The role of giant stomata in leaf development, and the consequences on stomatal density in adult leaves remains elusive. This paper describes the characteristics of ordinary and giant stomata in leaves of two black poplar genotypes (58-861 with large leaves from northern Italy, and Poli with small leaves from southern Italy. Stomatal traits in both genotypes were studied using light microscopy on mature leaf adaxial and abaxial epidermal impressions. Moreover, scanning electron microscopy was applied to study giant and normal stomata in early, young, and mature leaves. Leaf abaxial surfaces in the two genotypes revealed variable sizes and patterns of stomata related to differences in intrinsic water use efficiency (Wi. These observations provided evidence of different stomatal types in mature black poplar leaves, and new information regarding the presence and potential role of giant stomata in black poplar leaves.

  13. Terra Populus and DataNet Collaboration

    Science.gov (United States)

    Kugler, T.; Ruggles, S.; Fitch, C. A.; Clark, P. D.; Sobek, M.; Van Riper, D.

    2012-12-01

    Terra Populus, part of NSF's new DataNet initiative, is developing organizational and technical infrastructure to integrate, preserve, and disseminate data describing changes in the human population and environment over time. Terra Populus will incorporate large microdata and aggregate census datasets from the United States and around the world, as well as land use, land cover, climate and other environmental datasets. These data are widely dispersed, exist in a variety of data structures, have incompatible or inadequate metadata, and have incompatible geographic identifiers. Terra Populus is developing methods of integrating data from different domains and translating across data structures based on spatio-temporal linkages among data contents. The new infrastructure will enable researchers to identify and merge data from heterogeneous sources to study the relationships between human behavior and the natural world. Terra Populus will partner with data archives, data producers, and data users to create a sustainable international organization that will guarantee preservation and access over multiple decades. Terra Populus is also collaborating with the other projects in the DataNet initiative - DataONE, the DataNet Federation Consortium (DFC) and Sustainable Environment-Actionable Data (SEAD). Taken together, the four projects address aspects of the entire data lifecycle, including planning, collection, documentation, discovery, integration, curation, preservation, and collaboration; and encompass a wide range of disciplines including earth sciences, ecology, social sciences, hydrology, oceanography, and engineering. The four projects are pursuing activities to share data, tools, and expertise between pairs of projects as well as collaborating across the DataNet program on issues of cyberinfrastructure and community engagement. Topics to be addressed through program-wide collaboration include technical, organizational, and financial sustainability; semantic

  14. Barcoding poplars (Populus L. from western China.

    Directory of Open Access Journals (Sweden)

    Jianju Feng

    Full Text Available BACKGROUND: Populus is an ecologically and economically important genus of trees, but distinguishing between wild species is relatively difficult due to extensive interspecific hybridization and introgression, and the high level of intraspecific morphological variation. The DNA barcoding approach is a potential solution to this problem. METHODOLOGY/PRINCIPAL FINDINGS: Here, we tested the discrimination power of five chloroplast barcodes and one nuclear barcode (ITS among 95 trees that represent 21 Populus species from western China. Among all single barcode candidates, the discrimination power is highest for the nuclear ITS, progressively lower for chloroplast barcodes matK (M, trnG-psbK (G and psbK-psbI (P, and trnH-psbA (H and rbcL (R; the discrimination efficiency of the nuclear ITS (I is also higher than any two-, three-, or even the five-locus combination of chloroplast barcodes. Among the five combinations of a single chloroplast barcode plus the nuclear ITS, H+I and P+I differentiated the highest and lowest portion of species, respectively. The highest discrimination rate for the barcodes or barcode combinations examined here is 55.0% (H+I, and usually discrimination failures occurred among species from sympatric or parapatric areas. CONCLUSIONS/SIGNIFICANCE: In this case study, we showed that when discriminating Populus species from western China, the nuclear ITS region represents a more promising barcode than any maternally inherited chloroplast region or combination of chloroplast regions. Meanwhile, combining the ITS region with chloroplast regions may improve the barcoding success rate and assist in detecting recent interspecific hybridizations. Failure to discriminate among several groups of Populus species from sympatric or parapatric areas may have been the result of incomplete lineage sorting, frequent interspecific hybridizations and introgressions. We agree with a previous proposal for constructing a tiered barcoding system in

  15. Ultraviolet-B radiation alters phenolic salicylate and flavenoid composition of Populus trichocarpa leaves

    Energy Technology Data Exchange (ETDEWEB)

    Warren, J. M. [USDA Forest Service, Forestry Science Laboratory, Corwallis, OR (United States); Bassman, J. H. [Washington State Univ., Dept. of Natural Resources Sciences, Pullman, WA (United States); Fellman, J. K.; Mattinson, D. S. [Washington State Univ., Dept. of Horticulture and Landscape Architecture, Pullman, WA (United States); Eigenbrode, S. [Idaho Univ., Dept. of Plant, Soil and Entomological Sciences, Moscow, ID (United States)

    2003-06-01

    Foliar phenolic composition of field- and greenhouse-grown black cottonwood was studied by subjecting samples to near zero, ambient and twice-ambient concentrations of biologically effective ultraviolet-B radiation. Phenolic compounds were extracted after three months, separated by liquid chromatography and identified and quantified by diode-array spectrometry and mass spectrometry. Phenolic compounds that were found to have increased in response to UV-B radiation were flavonoids, although increasing the level of radiation to ambient and twice ambient levels did not result in further flavonoid accumulation in either greenhouse or field samples. There was, however, an increase in salicortin, a non-flavonoid glycoside, and a salicylates that is important in plant-herbivore-predator relationships. It was concluded that enhanced solar UV-B radiation has the capacity to significantly alter trophic structure in some ecosystems by stimulating specific phenolic compounds. 74 refs., 1 tab., 6 figs.

  16. Populus Responses to Edaphic and Climatic Cues: Emerging Evidence from Systems Biology Research

    Energy Technology Data Exchange (ETDEWEB)

    Wullschleger, Stan D [ORNL; Weston, David [ORNL; Davis, John M [University of Florida

    2009-01-01

    The emergence of Populus as a model system for tree biology continues to be driven by a community of scientists dedicated to developing the resources needed to undertake genetic and functional genomic studies in this genus. As a result, understanding the molecular processes that underpin the growth and development of cottonwood, aspen, and hybrid poplar has steadily increased over the last several decades. Recently, our ability to examine the basic mechanisms whereby trees respond to a changing climate and resource limitations has benefited greatly from the sequencing of the P. trichocarpa genome. This landmark event has laid a solid foundation upon which biologists can now quantify, in breathtaking and unprecedented detail, the diversity of genes, proteins, and metabolites that govern the growth and development of some of the longest living and tallest growing organisms on Earth. Although the challenges likely to be encountered by scientists who work with trees are many, recent literature provides a few examples where a systems approach, one that focuses on integrating transcriptomic, proteomic, and metabolomic analyses, is beginning to provide insights into the molecular-scale response of poplars to their climatic and edaphic environment. In this review, our objectives are to look at evidence from studies that examine the molecular response of poplar to edaphic and climatic cues and highlight instances where two or more omic-scale measurements confirm and hopefully expand our inferences about mechanisms contributing to observed patterns of response. Based on conclusions drawn from these studies, we propose that three requirements will be essential as systems biology in poplar moves to reveal unique insights. These include use of genetically-defined individuals (e.g., pedigrees or transgenics) in studies; incorporation of modeling as a complement to transcriptomic, proteomic and metabolomic data; and inclusion of whole-tree and stand-level phenotypes to place

  17. Identification and Characterization of the Populus AREB/ABF Subfamily

    Institute of Scientific and Technical Information of China (English)

    Lexiang Ji; Jia Wang; Meixia Ye; Ying Li; Bin Guo; Zhong Chen; Hao Li; Xinmin An

    2013-01-01

    Abscisic acid (ABA) is a major plant hormone that plays an important role in responses to abiotic stresses.The ABA-responsive element binding proteinlABRE-binding factor (AREB/ABF) gene subfamily contains crucial transcription factors in the ABA-mediated signaling pathway.In this study,a total of 14 putative AREB/ABF members were identified in the Populus trichocarpa Torr.& Gray.genome using five AREB/ABF amino acid sequences from Arabidopsis thaliana L.as probes.The 14 putative Populus subfamily members showed high protein similarities,especially in the basic leucine zipper (bZlP) domain region.A neighbor-joining analysis combined with gene structure data revealed homology among the 14 genes.The expression patterns of the Populus AREB/ABF subfamily suggested that the most abundant transcripts of 11 genes occurred in leaf tissues,while two genes were most transcribed in root tissues.Significantly,eight Populus AREB/ABF gene members were upregulated after treatment with 100 μM exogenous ABA,while the other six members were downregulated.We identified the expression profiles of the subfamily members in Populus tissues and elucidated different response patterns of Populus AREB/ABF members to ABA stress.This study provided insight into the roles of Populus AREB/ABF homologues in plant response to abiotic stresses.

  18. Gene Response to Salt Stress in Populus euphratica

    Institute of Scientific and Technical Information of China (English)

    Shen Xin; Thomas Teichmenn; Wang Yiqin; Bai Genben; Yu Guangjun; Wang Shasheng

    2003-01-01

    Through construction of a subtracted cDNA library and library screening, a number of salt-induced cDNA fragmentshave been cloned from Populus euphratica. Based on the results of DNA sequencing and Northern analysis, the gene response ofPopulus euphratica to salt stress is discussed. It is indicated that in response to salt treatment the transcription level for some genes ofPopulus euphratica increases by about 1.5 times and significant difference between the responses to osmotic stress and to ion stresshas been observed in gene activity.

  19. Audubon National Wildlife Refuge, Lake Nettie National Wildlife Refuge, Camp Lake Easement Refuge, Wintering River Easement Refuge, Cottonwood Lake Easement Refuge, Sheyenne Lake Easement Refuge : Narrative report : 1969

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — This annual narrative report for Audubon National Wildlife Refuge (including Lake Nettie National Wildlife Refuge, Camp Lake Easement Refuge, Cottonwood Lake...

  20. 2004 progress report : Effects of ungulate browsing on post-fire recovery of riparian cottonwoods : Implications for management of riparian forests, Seedskadee National Wildlife Refuge, Wyoming

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — Browsing pressure by ungulates may limit natural establishment of native cottonwood and willow stands, and fires, which have become more frequent on riparian lands...

  1. Anthocyanins of the anthers as chemotaxonomic markers in the genus Populus L.. Differentiation between Populus nigra, Populus alba and Populus tremula.

    Science.gov (United States)

    Alcalde-Eon, Cristina; García-Estévez, Ignacio; Rivas-Gonzalo, Julián C; Rodríguez de la Cruz, David; Escribano-Bailón, María Teresa

    2016-08-01

    Three main species of Popululs L. (Salicaceae) have been reported to occur in the Iberian Peninsula: Populus nigra L., Populus alba L. and Populus tremula L. The degree of pilosity of the bracts of the male catkins is a key character for their differentiation. The anthers of these poplar species possess anthocyanins that provide them a red colouration. Since these poplars are wind-pollinated and, consequently, do not need to attract pollinators, anthocyanins in the anthers might be acting as photoprotectors, shielding pollen grains from excessive sunlight. In order to verify this hypothesis, the first objective of this study was to establish if there is any relationship between the degree of pilosity of the bracts (related to the physical shading of the pollen grains) and the levels and types of anthocyanins in the anthers of these three species. This study also aimed to check the usefulness of the anthocyanins of the anthers as chemotaxonomic markers, through the study of the differences in the anthocyanin composition between these poplar species. Anthocyanins were identified from the data supplied by HPLC-DAD-MS(n) analyses. Seventeen different compounds, including mono-, di- and triglycosides and anthocyanin-derived pigments (F-A(+) dimers) have been identified. Cyanidin 3-O-glucoside was the major compound in all the samples (>60% of the total content), which may be in accordance with the photoprotective role proposed for them. However, qualitative and quantitative differences were detected among samples. Cyanidin and delphinidin 3-O-sambubiosides have been detected only in the anthers of P. tremula as well as cyanidin 3-O-(2″-O-xyloxyl)rutinoside, making them valuable chemotaxonomic markers for this species. Hierarchical Cluster and Principal Components Analyses (HCA and PCA) carried out with the anthocyanin percent composition data have allowed a separation of the samples that is in accordance with the initial classification of the samples made from the

  2. Anthocyanins of the anthers as chemotaxonomic markers in the genus Populus L.. Differentiation between Populus nigra, Populus alba and Populus tremula.

    Science.gov (United States)

    Alcalde-Eon, Cristina; García-Estévez, Ignacio; Rivas-Gonzalo, Julián C; Rodríguez de la Cruz, David; Escribano-Bailón, María Teresa

    2016-08-01

    Three main species of Popululs L. (Salicaceae) have been reported to occur in the Iberian Peninsula: Populus nigra L., Populus alba L. and Populus tremula L. The degree of pilosity of the bracts of the male catkins is a key character for their differentiation. The anthers of these poplar species possess anthocyanins that provide them a red colouration. Since these poplars are wind-pollinated and, consequently, do not need to attract pollinators, anthocyanins in the anthers might be acting as photoprotectors, shielding pollen grains from excessive sunlight. In order to verify this hypothesis, the first objective of this study was to establish if there is any relationship between the degree of pilosity of the bracts (related to the physical shading of the pollen grains) and the levels and types of anthocyanins in the anthers of these three species. This study also aimed to check the usefulness of the anthocyanins of the anthers as chemotaxonomic markers, through the study of the differences in the anthocyanin composition between these poplar species. Anthocyanins were identified from the data supplied by HPLC-DAD-MS(n) analyses. Seventeen different compounds, including mono-, di- and triglycosides and anthocyanin-derived pigments (F-A(+) dimers) have been identified. Cyanidin 3-O-glucoside was the major compound in all the samples (>60% of the total content), which may be in accordance with the photoprotective role proposed for them. However, qualitative and quantitative differences were detected among samples. Cyanidin and delphinidin 3-O-sambubiosides have been detected only in the anthers of P. tremula as well as cyanidin 3-O-(2″-O-xyloxyl)rutinoside, making them valuable chemotaxonomic markers for this species. Hierarchical Cluster and Principal Components Analyses (HCA and PCA) carried out with the anthocyanin percent composition data have allowed a separation of the samples that is in accordance with the initial classification of the samples made from the

  3. Paraffin dispersant application for cleaning subsea flow lines in the deep water Gulf of Mexico cottonwood development

    Energy Technology Data Exchange (ETDEWEB)

    Jennings, David; White, Jake; Pogoson, Oje [Baker Hughes Inc., Houston, TX (United States); Barros, Dalmo; Ramachandran, Kartik; Bonin, George; Waltrich, Paulo; Shecaira, Farid [PETROBRAS America, Houston, TX (United States); Ziglio, Claudio [Petroleo Brasileiro S.A. (CENPES/PETROBRAS), Rio de Janeiro, RJ (Brazil). Centro de Pesquisa e Desenvolvimento

    2012-07-01

    This paper discusses a paraffin dispersant (in seawater) application to clean paraffin deposition from a severely restricted 17.4-mile dual subsea flow line system in the Gulf of Mexico Cottonwood development. In principle, dispersant treatments are simple processes requiring effective dispersant packages and agitation to break-up and disperse deposition. Dispersants have been used onshore for treating wax deposition for decades. Implementation of a treatment in a long deep water production system, however, poses numerous challenges. The Cottonwood application was one of the first ever deep water dispersant applications. The application was designed in four separate phases: pre-treatment displacement for hydrate protection, dispersant treatment for paraffin deposition removal, pigging sequence for final flow line cleaning, and post-treatment displacement for hydrate protection. In addition, considerable job planning was performed to ensure the application was executed in a safe and environmentally responsible manner. Two dynamically positioned marine vessels were used for pumping fluids and capturing returns. The application was extremely successful in restoring the deep water flow lines back to near pre-production state. Final pigging operations confirmed the flow lines were cleaned of all restrictions. Significant paraffin deposition was removed in the application. Approximately 900 bbls of paraffin sludge was recovered from the 4000 bbl internal volume flow line loop. Furthermore, the application was completed with zero discharge of fluids. The application provided significant value for the Cottonwood development. It allowed production from wells to be brought on-line at a higher capacity, thereby generating increased revenue. It also allowed resumption of routine pigging operations. As such, the Cottonwood dispersant application illustrates that with proper planning and execution, paraffin dispersant treatments can be highly effective solutions for cleaning

  4. Riparian Cottonwood Ecosystems and Regulated Flows in Kootenai and Yakima Sub-Basins : Volume II Yakima (Overview, Report, Appendices).

    Energy Technology Data Exchange (ETDEWEB)

    Jamieson, Bob; Braatne, Jeffrey H.

    2001-10-01

    Riparian vegetation and especially cottonwood and willow plant communities are dependent on normative flows and especially, spring freshette, to provide conditions for recruitment. These plant communities therefore share much in common with a range of fish species that require natural flow conditions to stimulate reproduction. We applied tools and techniques developed in other areas to assess riparian vegetation in two very different sub-basins within the Columbia Basin. Our objectives were to: Document the historic impact of human activity on alluvial floodplain areas in both sub-basins; Provide an analysis of the impacts of flow regulation on riparian vegetation in two systems with very different flow regulation systems; Demonstrate that altered spring flows will, in fact, result in recruitment to cottonwood stands, given other land uses impacts on each river and the limitations imposed by other flow requirements; and Assess the applicability of remote sensing tools for documenting the distribution and health of cottonwood stands and riparian vegetation that can be used in other sub-basins.

  5. Riparian Cottonwood Ecosystems and Regulated Flows in Kootenai and Yakima Sub-Basins : Volume III (Overview and Tools).

    Energy Technology Data Exchange (ETDEWEB)

    Jamieson, Bob; Braatne, Jeffrey H.

    2001-10-01

    Riparian vegetation and especially cottonwood and willow plant communities are dependent on normative flows and especially, spring freshette, to provide conditions for recruitment. These plant communities therefore share much in common with a range of fish species that require natural flow conditions to stimulate reproduction. We applied tools and techniques developed in other areas to assess riparian vegetation in two very different sub-basins within the Columbia Basin. Our objectives were to: Document the historic impact of human activity on alluvial floodplain areas in both sub-basins; Provide an analysis of the impacts of flow regulation on riparian vegetation in two systems with very different flow regulation systems; Demonstrate that altered spring flows will, in fact, result in recruitment to cottonwood stands, given other land uses impacts on each river and the limitations imposed by other flow requirements; and Assess the applicability of remote sensing tools for documenting the distribution and health of cottonwood stands and riparian vegetation that can be used in other sub-basins.

  6. Rooting greenwood tip cuttings of several Populus clones hydroponically (hydroponic rooting of Populus cuttings)

    Energy Technology Data Exchange (ETDEWEB)

    Phipps, H.M.; Hansen, E.A.; Tolsted, D.N.

    1980-01-01

    Greenwood cuttings of several Populus clones were successfully rooted with a relatively simple hydroponic method. Indolebutyric acid and naphthaleneacetic acid at concentrations of 500 to 5000 ppM applied as a quick dip to the cutting bases, a complete nutrient solution at 20 to 40% of full strength, and a solution temperature between 27 and 30/sup 0/C generally produced the best rooting performance of most clones. Cuttings propagated by the hydroponic procedure rooted faster and generally outgrew those produced by a standard method after being transplanted to pots and grown in the greenhouse.

  7. Prevalence of LuxR- and LuxI-type quorum sensing circuits in members of the Populus deltoides microbiome

    Energy Technology Data Exchange (ETDEWEB)

    Schaefer, Amy L [University of Washington, Seattle; Lappala, Colin [University of Washington, Seattle; Morlen, Ryan [University of Washington, Seattle; Pelletier, Dale A [ORNL; Lu, Tse-Yuan [ORNL; Lankford, Patricia K [ORNL; Harwood, Caroline S [University of Washington, Seattle; Greenberg, E. Peter [University of Washington, Seattle

    2013-01-01

    We are interested in the root microbiome of the fast-growing Eastern cottonwood tree, Populus 25 deltoides. There is a large bank of bacterial isolates from P. deltoides and there are 44 draft 26 genomes of bacterial endophyte and rhizosphere isolates. As a first step in efforts to understand 27 the roles of bacterial communication and plant-bacterial signaling in P. deltoides we focused on 28 the prevalence of acyl-homoserine lactone (AHL) quorum sensing signal production and 29 reception in members of the P. deltoides microbiome. We screened 129 bacterial isolates for 30 AHL production using a broad-spectrum bioassay that responds to many but not all AHLs, and 31 we queried the available genome sequences of microbiome isolates for homologs of AHL 32 synthase and receptor genes. AHL signal production was detected in 40% of 129 strains tested. 33 Positive isolates included -, - and -Proteobacteria. Members of the luxI family of AHL 34 synthases were identified in 18 of 39 Proteobacteria genomes including genomes of some 35 isolates that tested negative in the bioassay. Members of the luxR family of transcription factors, 36 that include AHL-responsive factors, were more abundant than luxI homologs. There were 72 in 37 the 39 Proteobacteria genomes. Some of the luxR homologs appear to be members of a 38 subfamily of LuxRs that respond to as yet unknown plant signals rather than bacterial AHLs. 39 Apparently, there is a substantial capacity for AHL cell-to-cell communication in Proteobacteria 40 of the P. deltoides microbiota and there are also Proteobacteria with LuxR homologs of the type 41 hypothesized to respond to plant signals or cues.

  8. Climate, streamflow, and legacy effects on growth of riparian Populus angustifolia in the arid San Luis Valley, Colorado

    Science.gov (United States)

    Andersen, Douglas

    2016-01-01

    Knowledge of the factors affecting the vigor of desert riparian trees is important for their conservation and management. I used multiple regression to assess effects of streamflow and climate (12–14 years of data) or climate alone (up to 60 years of data) on radial growth of clonal narrowleaf cottonwood (Populus angustifolia), a foundation species in the arid, Closed Basin portion of the San Luis Valley, Colorado. I collected increment cores from trees (14–90 cm DBH) at four sites along each of Sand and Deadman creeks (total N = 85), including both perennial and ephemeral reaches. Analyses on trees common. Models for trees farther from the channel or over a deep water table explained 23–71% of SGI variability, and 4 of 5 contained a streamflow variable. Analyses using solely climate variables over longer time periods explained 17–85% of SGI variability, and 10 of 12 included a variable indexing summer precipitation. Three large, abrupt shifts in recent decades from wet to dry conditions (indexed by a seasonal Palmer Drought Severity Index) coincided with dramatically reduced radial growth. Each shift was presumably associated with branch dieback that produced a legacy effect apparent in many SGI series: uncharacteristically low SGI in the year following the shift. My results suggest trees in locations distant from the active channel rely on the regional shallow unconfined aquifer, summer rainfall, or both to meet water demands. The landscape-level differences in the water supplies sustaining these trees imply variable effects from shifts in winter-versus monsoon-related precipitation, and from climate change versus streamflow or groundwater management.

  9. Highly efficient isolation of Populus mesophyll protoplasts and its application in transient expression assays.

    Directory of Open Access Journals (Sweden)

    Jianjun Guo

    Full Text Available BACKGROUND: Populus is a model woody plant and a promising feedstock for lignocellulosic biofuel production. However, its lengthy life cycle impedes rapid characterization of gene function. METHODOLOGY/PRINCIPAL FINDINGS: We optimized a Populus leaf mesophyll protoplast isolation protocol and established a Populus protoplast transient expression system. We demonstrated that Populus protoplasts are able to respond to hormonal stimuli and that a series of organelle markers are correctly localized in the Populus protoplasts. Furthermore, we showed that the Populus protoplast transient expression system is suitable for studying protein-protein interaction, gene activation, and cellular signaling events. CONCLUSIONS/SIGNIFICANCE: This study established a method for efficient isolation of protoplasts from Populus leaf and demonstrated the efficacy of using Populus protoplast transient expression assays as an in vivo system to characterize genes and pathways.

  10. Highly Efficient Isolation of Populus Mesophyll Protoplasts and Its Application in Transient Expression Assays

    Energy Technology Data Exchange (ETDEWEB)

    Guo, Jianjun [ORNL; Morrell-Falvey, Jennifer L [ORNL; Labbe, Jessy L [ORNL; Muchero, Wellington [ORNL; Kalluri, Udaya C [ORNL; Tuskan, Gerald A [ORNL; Chen, Jay [ORNL

    2012-01-01

    Background: Populus is a model woody plant and a promising feedstock for lignocellulosic biofuel production. However, its lengthy life cycle impedes rapid characterization of gene function. Methodology/Principal Findings: We optimized a Populus leaf mesophyll protoplast isolation protocol and established a Populus protoplast transient expression system. We demonstrated that Populus protoplasts are able to respond to hormonal stimuli and that a series of organelle markers are correctly localized in the Populus protoplasts. Furthermore, we showed that the Populus protoplast transient expression system is suitable for studying protein-protein interaction, gene activation, and cellular signaling events. Conclusions/Significance: This study established a method for efficient isolation of protoplasts from Populus leaf and demonstrated the efficacy of using Populus protoplast transient expression assays as an in vivo system to characterize genes and pathways.

  11. Precision Gravity Monitoring of Artificial Recharge at Little Cottonwood Canyon, Wasatch Front, Utah

    Science.gov (United States)

    Johnson, B. S.; Gettings, P.; Chapman, D. S.

    2008-12-01

    Repeated high-precision (± 5 μGal) gravity surveys are used to monitor artificial groundwater recharge at the Little Cottonwood Water Treatment Plant (LCWTP) in the southern portion of the Salt Lake Valley, UT. The gravity survey network consists of 30 sites arranged to capture the expected horizontal migration (> 500 meters/yr) of the infiltrated water. An additional 4 stations are arranged 1500 meters from the LCWTP infiltration sites for regional and environmental background control. Prior to starting recharge operations, a set of five background surveys were made between spring 2006 and summer 2007. Background (natural/environmental) variability is reliably estimated at 20 μGals. Infiltration commenced in mid-September 2007 and bimonthly gravity surveys were conducted until July 2008. A peak gravity change of 100 μGals was observed at the end of infiltration. The campaigns following cessation of infiltration showed a decreasing gravity anomaly indicating a dispersion of the ground water mound produced by the infiltration. The final gravity results from July of 2008 showed a 70 μGal decrease from the peak gravity value. Observations suggest the subsurface water flowed to the west of the LCWTP; however the control stations at the western most extent of the survey area show no increase in gravity. The gravity observations are comparable to a previous study conducted in the Weber River delta, which showed that the gravity decay over 3-5 months can be used to determine the bulk hydraulic conductivity of the area.

  12. Floodplain Formation and Cottonwood Colonization Patterns on the Willamette River, Oregon, USA.

    Science.gov (United States)

    Dykaar; Wigington

    2000-01-01

    / Using a series of aerial photographs taken between 1936 and 1996, we trace coevolution of floodplain and riparian forest on the Willamette River. Within-channel barforms appear to be the predominant incipient floodplain landform and habitat for primary succession. Interlinked development of bar(s) and erosion of near banks, filling of channels, and establishment and growth of cottonwoods and willows results in coalescence with older floodplain. Sizeand internal structure of riparian forest patches reflect evolution of underlying barforms or channel beds. Floodplain matures as the active channel migrates away by repetition of the bar formation and near-bank erosion process, or is progressively abandoned by infilling and/or constriction with a bar. Other parts of the floodplain are recycled as eroding banks provide the coarse sediment and large woody debris for building new bars. A multichannel planform is maintained as building bars split flow; channels lengthen as bars and islands join into larger assemblages. Avulsion appears to cut new channels only short distances. Given the central role of bars and islands in building new floodplain habitat, we identify their area as a geomorphic indicator of river-floodplain integrity. We measure an 80% decline in bar and island area between 1910 and 1988 within a 22-km section. Dams, riprap, logging, and gravel mining may all be contributing to diminished bar formation rates. Removing obstacles to natural riparian forest creation mechanisms is necessary to regenerate the river-floodplain system and realize its productive potential. PMID:10552104

  13. Black to Black

    DEFF Research Database (Denmark)

    Langkjær, Michael Alexander

    2012-01-01

    Pop musicians performing in black stage costume take advantage of cultural traditions relating to matters black. Stylistically, black is a paradoxical color: although a symbol of melancholy, pessimism, and renunciation, black also expresses minimalist modernity and signifies exclusivity (as...

  14. The CLE gene family in Populus trichocarpa.

    Science.gov (United States)

    Liu, Zhijun; Yang, Nan; Lv, Yanting; Pan, Lixia; Lv, Shuo; Han, Huibin; Wang, Guodong

    2016-06-01

    The CLE (CLAVATA3/Embryo Surrounding Region-related) peptides are small secreted signaling peptides that are primarily involved in the regulation of stem cell homeostasis in different plant meristems. Particularly, the characterization of the CLE41-PXY/TDR signaling pathway has greatly advanced our understanding on the potential roles of CLE peptides in vascular development and wood formation. Nevertheless, our knowledge on this gene family in a tree species is limited. In a recent study, we reported on a systematically investigation of the CLE gene family in Populus trichocarpa. The potential roles of PtCLE genes were studied by comparative analysis and transcriptional profiling. Among fifty PtCLE members, many PtCLE proteins share identical CLE motifs or contain the same CLE motif as that of AtCLEs, while PtCLE genes exhibited either comparable or distinct expression patterns comparing to their Arabidopsis counterparts. These findings indicate the existence of both functional conservation and functional divergence between PtCLEs and their AtCLE orthologues. Our results provide valuable resources for future functional investigations of these critical signaling molecules in woody plants. PMID:27232947

  15. Variable Nitrogen Fixation in Wild Populus.

    Directory of Open Access Journals (Sweden)

    Sharon L Doty

    Full Text Available The microbiome of plants is diverse, and like that of animals, is important for overall health and nutrient acquisition. In legumes and actinorhizal plants, a portion of essential nitrogen (N is obtained through symbiosis with nodule-inhabiting, N2-fixing microorganisms. However, a variety of non-nodulating plant species can also thrive in natural, low-N settings. Some of these species may rely on endophytes, microorganisms that live within plants, to fix N2 gas into usable forms. Here we report the first direct evidence of N2 fixation in the early successional wild tree, Populus trichocarpa, a non-leguminous tree, from its native riparian habitat. In order to measure N2 fixation, surface-sterilized cuttings of wild poplar were assayed using both 15N2 incorporation and the commonly used acetylene reduction assay. The 15N label was incorporated at high levels in a subset of cuttings, suggesting a high level of N-fixation. Similarly, acetylene was reduced to ethylene in some samples. The microbiota of the cuttings was highly variable, both in numbers of cultured bacteria and in genetic diversity. Our results indicated that associative N2-fixation occurred within wild poplar and that a non-uniformity in the distribution of endophytic bacteria may explain the variability in N-fixation activity. These results point to the need for molecular studies to decipher the required microbial consortia and conditions for effective endophytic N2-fixation in trees.

  16. Growth of Populus and Salix Species under Compost Leachate Irrigation

    Directory of Open Access Journals (Sweden)

    Tooba Abedi

    2014-12-01

    Full Text Available According to the known broad variation in remediation capacity, three plant species were used in the experiment: two fast growing poplar’s clones - Populus deltoides, Populus euramericana, and willows Salix alba. Populus and Salix cuttings were collected from the nursery of the Populus Research Center of Safrabasteh in the eastern part of Guilan province at north of Iran. The Populus clones were chosen because of their high biomass production capacity and willow- because it is native in Iran. The highest diameter growth rate was exhibited for all three plant species by the 1:1 treatment with an average of 0.26, 0.22 and 0.16 cm in eight months period for P. euroamericana, P. deltoides and S. alba, respectively. Over a period of eight months a higher growth rate of height was observed in (P and (1:1 treatment for S. alba (33.70 and 15.77 cm, respectively and in (C treatment for P. deltoides (16.51 cm. P. deltoides and S. alba produced significantly (p<0.05 smaller aboveground biomass in (P treatment compared to all species. P. deltoides exhibited greater mean aboveground biomass in the (1:1 treatment compared to other species. There were significant differences (p<0.05 in the growth of roots between P. deltoides, P. euramericana and S. alba in all of the treatments.

  17. Efficient Agrobacterium-Mediated Transformation of Hybrid Poplar Populus davidiana Dode × Populus bollena Lauche

    Directory of Open Access Journals (Sweden)

    Xue Han

    2013-01-01

    Full Text Available Poplar is a model organism for high in vitro regeneration in woody plants. We have chosen a hybrid poplar Populus davidiana Dode × Populus bollena Lauche. By optimizing the Murashige and Skoog medium with (0.3 mg/L 6-benzylaminopurine and (0.08 mg/L naphthaleneacetic acid, we have achieved the highest frequency (90% for shoot regeneration from poplar leaves. It was also important to improve the transformation efficiency of poplar for genetic breeding and other applications. In this study, we found a significant improvement of the transformation frequency by controlling the leaf age. Transformation efficiency was enhanced by optimizing the Agrobacterium concentration (OD600 = 0.8–1.0 and an infection time (20–30 min. According to transmission electron microscopy observations, there were more Agrobacterium invasions in the 30-day-old leaf explants than in 60-day-old and 90-day-old explants. Using the green fluorescent protein (GFP marker, the expression of MD–GFP fusion proteins in the leaf, shoot, and root of hybrid poplar P. davidiana Dode × P. bollena Lauche was visualized for confirmation of transgene integration. Southern and Northern blot analysis also showed the integration of T-DNA into the genome and gene expression of transgenic plants. Our results suggest that younger leaves had higher transformation efficiency (~30% than older leaves (10%.

  18. The Populus Genome Integrative Explorer (PopGenIE): a new resource for exploring the Populus genome.

    Science.gov (United States)

    Sjödin, Andreas; Street, Nathaniel Robert; Sandberg, Göran; Gustafsson, Petter; Jansson, Stefan

    2009-06-01

    Populus has become an important model plant system. However, utilization of the increasingly extensive collection of genetics and genomics data created by the community is currently hindered by the lack of a central resource, such as a model organism database (MOD). Such MODs offer a single entry point to the collection of resources available within a model system, typically including tools for exploring and querying those resources. As a starting point to overcoming the lack of such an MOD for Populus, we present the Populus Genome Integrative Explorer (PopGenIE), an integrated set of tools for exploring the Populus genome and transcriptome. The resource includes genome, synteny and quantitative trait locus (QTL) browsers for exploring genetic data. Expression tools include an electronic fluorescent pictograph (eFP) browser, expression profile plots, co-regulation within collated transcriptomics data sets, and identification of over-represented functional categories and genomic hotspot locations. A number of collated transcriptomics data sets are made available in the eFP browser to facilitate functional exploration of gene function. Additional homology and data extraction tools are provided. PopGenIE significantly increases accessibility to Populus genomics resources and allows exploration of transcriptomics data without the need to learn or understand complex statistical analysis methods. PopGenIE is available at www.popgenie.org or via www.populusgenome.info.

  19. The glutamine synthetase gene family in Populus

    Directory of Open Access Journals (Sweden)

    Cánovas Francisco M

    2011-08-01

    Full Text Available Abstract Background Glutamine synthetase (GS; EC: 6.3.1.2, L-glutamate: ammonia ligase ADP-forming is a key enzyme in ammonium assimilation and metabolism of higher plants. The current work was undertaken to develop a more comprehensive understanding of molecular and biochemical features of GS gene family in poplar, and to characterize the developmental regulation of GS expression in various tissues and at various times during the poplar perennial growth. Results The GS gene family consists of 8 different genes exhibiting all structural and regulatory elements consistent with their roles as functional genes. Our results indicate that the family members are organized in 4 groups of duplicated genes, 3 of which code for cytosolic GS isoforms (GS1 and 1 which codes for the choroplastic GS isoform (GS2. Our analysis shows that Populus trichocarpa is the first plant species in which it was observed the complete GS family duplicated. Detailed expression analyses have revealed specific spatial and seasonal patterns of GS expression in poplar. These data provide insights into the metabolic function of GS isoforms in poplar and pave the way for future functional studies. Conclusions Our data suggest that GS duplicates could have been retained in order to increase the amount of enzyme in a particular cell type. This possibility could contribute to the homeostasis of nitrogen metabolism in functions associated to changes in glutamine-derived metabolic products. The presence of duplicated GS genes in poplar could also contribute to diversification of the enzymatic properties for a particular GS isoform through the assembly of GS polypeptides into homo oligomeric and/or hetero oligomeric holoenzymes in specific cell types.

  20. A new diterpenoid from the stem bark of Populus davidiana

    Institute of Scientific and Technical Information of China (English)

    Xin Feng Zhang; Xiang Li; Byung Sun Min; Ki Hwan Bae

    2008-01-01

    A new diterpenoid, named populusol A (1), was isolated from the methanolic extraction of the stem bark of Populus davidiana. The structure was elucidated on the basis of extensive 1D and 2D NMR as well as HRFAB-MS spectroscopic analysis.

  1. Flooding Regime Impacts on Radiation, Evapotranspiration, and Latent Energy Fluxes over Groundwater-Dependent Riparian Cottonwood and Saltcedar Forests

    Directory of Open Access Journals (Sweden)

    James Cleverly

    2015-01-01

    Full Text Available Radiation and energy balances are key drivers of ecosystem water and carbon cycling. This study reports on ten years of eddy covariance measurements over groundwater-dependent ecosystems (GDEs in New Mexico, USA, to compare the role of drought and flooding on radiation, water, and energy budgets of forests differing in species composition (native cottonwood versus nonnative saltcedar and flooding regime. After net radiation (700–800 W m−2, latent heat flux was the largest energy flux, with annual values of evapotranspiration exceeding annual precipitation by 250–600%. Evaporative cooling dominated the energy fluxes of both forest types, although cottonwood generated much lower daily values of sensible heat flux (<−5 MJ m−2 d−1. Drought caused a reduction in evaporative cooling, especially in the saltcedar sites where evapotranspiration was also reduced, but without a substantial decline in depth-to-groundwater. Our findings have broad implications on water security and the management of native and nonnative vegetation within semiarid southwestern North America. Specifically, consideration of the energy budgets of GDEs as they respond to fluctuations in climatic conditions can inform the management options for reducing evapotranspiration and maintaining in-stream flow, which is legally mandated as part of interstate and international water resources agreements.

  2. Water-Quality Characteristics of Cottonwood Creek, Taggart Creek, Lake Creek, and Granite Creek, Grand Teton National Park, Wyoming, 2006

    Science.gov (United States)

    Clark, Melanie L.; Wheeler, Jerrod D.; O'Ney, Susan E.

    2007-01-01

    To address water-resource management objectives of the National Park Service in Grand Teton National Park, the U.S. Geological Survey in cooperation with the National Park Service has conducted water-quality sampling on streams in the Snake River headwaters area. A synoptic study of streams in the western part of the headwaters area was conducted during 2006. Sampling sites were located on Cottonwood Creek, Taggart Creek, Lake Creek, and Granite Creek. Sampling events in June, July, August, and October were selected to characterize different hydrologic conditions and different recreational-use periods. Stream samples were collected and analyzed for field measurements, major-ion chemistry, nutrients, selected trace elements, pesticides, and suspended sediment. Water types of Cottonwood Creek, Taggart Creek, Lake Creek, and Granite Creek were calcium bicarbonate. Dissolved-solids concentrations were dilute in Cottonwood Creek and Taggart Creek, which drain Precambrian-era rocks and materials derived from these rocks. Dissolved-solids concentrations ranged from 11 to 31 milligrams per liter for samples collected from Cottonwood Creek and Taggart Creek. Dissolved-solids concentrations ranged from 55 to 130 milligrams per liter for samples collected from Lake Creek and Granite Creek, which drain Precambrian-era rocks and Paleozoic-era rocks and materials derived from these rocks. Nutrient concentrations generally were small in samples collected from Cottonwood Creek, Taggart Creek, Lake Creek, and Granite Creek. Dissolved-nitrate concentrations were the largest in Taggart Creek. The Taggart Creek drainage basin has the largest percentage of barren land cover of the basins, and subsurface waters of talus slopes may contribute to dissolved-nitrate concentrations in Taggart Creek. Pesticide concentrations, trace-element concentrations, and suspended-sediment concentrations generally were less than laboratory reporting levels or were small for all samples. Water

  3. Increasing the productivity of short-rotation Populus plantations. Final report

    Energy Technology Data Exchange (ETDEWEB)

    DeBell, D.S.; Harrington, C.A.; Clendenen, G.W.; Radwan, M.A.; Zasada, J.C. [Forest Service, Olympia, WA (United States). Pacific Northwest Research Station

    1997-12-31

    This final report represents the culmination of eight years of biological research devoted to increasing the productivity of short rotation plantations of Populus trichocarpa and Populus hybrids in the Pacific Northwest. Studies provide an understanding of tree growth, stand development and biomass yield at various spacings, and how patterns differ by Populus clone in monoclonal and polyclonal plantings. Also included is some information about factors related to wind damage in Populus plantings, use of leaf size as a predictor of growth potential, and approaches for estimating tree and stand biomass and biomass growth. Seven research papers are included which provide detailed methods, results, and interpretations on these topics.

  4. Impact of Drying Methods on Wettability of Populus tomentosa

    Institute of Scientific and Technical Information of China (English)

    2008-01-01

    Plantation poplar is one of the most important resources for wood industry, its utilization field is vast. The wettability of Populus tomentosa with different drying methods was judged by measurement of contact angle using distilled water in this paper. The results showed that the specimens from conventional drying have the biggest contact angle, and the air dried have the smallest contact angle, air dried lumbers have a better wettability than the kiln dried. The changes of contact angle in a period of tim...

  5. Characterization of MORE AXILLARY GROWTH genes in Populus.

    Directory of Open Access Journals (Sweden)

    Olaf Czarnecki

    Full Text Available Strigolactones are a new class of plant hormones that play a key role in regulating shoot branching. Studies of branching mutants in Arabidopsis, pea, rice and petunia have identified several key genes involved in strigolactone biosynthesis or signaling pathway. In the model plant Arabidopsis, MORE AXILLARY GROWTH1 (MAX1, MAX2, MAX3 and MAX4 are four founding members of strigolactone pathway genes. However, little is known about the strigolactone pathway genes in the woody perennial plants.Here we report the identification of MAX homologues in the woody model plant Populus trichocarpa. We identified the sequence homologues for each MAX protein in P. trichocarpa. Gene expression analysis revealed that Populus MAX paralogous genes are differentially expressed across various tissues and organs. Furthermore, we showed that Populus MAX genes could complement or partially complement the shoot branching phenotypes of the corresponding Arabidopsis max mutants.This study provides genetic evidence that strigolactone pathway genes are likely conserved in the woody perennial plants and lays a foundation for further characterization of strigolactone pathway and its functions in the woody perennial plants.

  6. Using Populus as a lignocellulosic feedstock for bioethanol.

    Science.gov (United States)

    Porth, Ilga; El-Kassaby, Yousry A

    2015-04-01

    Populus species along with species from the sister genus Salix will provide valuable feedstock resources for advanced second-generation biofuels. Their inherent fast growth characteristics can particularly be exploited for short rotation management, a time and energy saving cultivation alternative for lignocellulosic feedstock supply. Salicaceae possess inherent cell wall characteristics with favorable cellulose to lignin ratios for utilization as bioethanol crop. We review economically important traits relevant for intensively managed biofuel crop plantations, genomic and phenotypic resources available for Populus, breeding strategies for forest trees dedicated to bioenergy provision, and bioprocesses and downstream applications related to opportunities using Salicaceae as a renewable resource. Challenges need to be resolved for every single step of the conversion process chain, i.e., starting from tree domestication for improved performance as a bioenergy crop, bioconversion process, policy development for land use changes associated with advanced biofuels, and harvest and supply logistics associated with industrial-scale biorefinery plants using Populus as feedstock. Significant hurdles towards cost and energy efficiency, environmental friendliness, and yield maximization with regards to biomass pretreatment, saccharification, and fermentation of celluloses and the sustainability of biorefineries as a whole still need to be overcome. PMID:25676392

  7. Audubon National Wildlife Refuge, Lake Nettie National Wildlife Refuge, Camp Lake Easement Refuge, Wintering River Easement Refuge, Cottonwood Lake Easement Refuge, Sheyenne Lake Easement Refuge, Lake Otis Easement Refuge : Narrative report : 1970

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — This annual narrative report for Audubon National Wildlife Refuge (including Lake Nettie National Wildlife Refuge, Camp Lake Easement Refuge, Cottonwood Lake...

  8. Audubon National Wildlife Refuge, Lake Nettie National Wildlife Refuge, Camp-Strawberry Lake Easement Refuge, Cottonwood Lake Easement Refuge, Wintering River Easement Refuge, Sheyenne Lake Easement Refuge : Narrative report : 1968

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — This annual narrative report for Audubon National Wildlife Refuge (including Lake Nettie National Wildlife Refuge, Camp-Strawberry Lake Easement Refuge, Cottonwood...

  9. Analysis of the Correlation between the Geographical Distribution of Populus euphratica Oliv. and the Climatic Environment

    Institute of Scientific and Technical Information of China (English)

    Yinke YANG; Zhenglong YAN

    2012-01-01

    [Objective] This research was to study the correlation regional climatic characteristics and changing geographic distribution of Populus euphratica Oily. (Sali- caceae), as well as the adaption of Populus euphratica Oliv. to the climatic environ- ment. [Method] The climatic characteristics, water source, groundwater and soil type in the distribution regions of Populus euphratica Oliv. and the effect of long-term hu- man activities were comprehensively analyzed based an overview of Populus eu- phratica Oliv. and its distribution. [Result] Specific regional climatic characteristics and long term human activities are the principle determinants for the growth of Populus euphratica Oliv. The change of leaf shape is a distinct feature of Populus euphratica Oliv. in adapting to the climatic environment. Populus euphratica Oliv. withstands various environmental stresses by means of in vivo synthesis, transport and conver- sion of secondary phenolic metabolites. Effective protection and rehabilitation mea- sures, and ecological water transport have obvious effect on the restoration and re- construction of damaged ecological environment of Populus euphratica oasis. [Con- clusion] This study is of great significance for the restoration of ecological environ- ment in the arid inland regions, north-west China.

  10. Chemo-mechanical modification of cottonwood for Pb(2+) removal from aqueous solutions: Sorption mechanisms and potential application as biofilter in drip-irrigation.

    Science.gov (United States)

    Mosa, Ahmed; El-Ghamry, Ayman; Trüby, Peter; Omar, Mahmoud; Gao, Bin; Elnaggar, Abdelhamid; Li, Yuncong

    2016-10-01

    Using biomass (e.g. crop residues) and its derivatives as biosorbents have been recognized as an eco-friendly technique for wastewater decontamination. In this study, mechanically modified cottonwood was further activated with KOH to improve its sorption of Pb(2+). In addition, its potential as a biofilter to safeguard radish (Raphanus sativus, L.) against Pb-stress was evaluated in a gravity-fed drip irrigation system. Physiochemical properties of the chemo-mechanically activated cottonwood (CMACW) and the mechanically activated cottonwood (MACW) before and after sorption process were characterized using scanning electron microscopy (SEM), energy dispersive X-ray spectroscopy (EDS), transmission electron microscopy (TEM), digital selected-area electron diffraction (SAED) and Fourier transform infrared spectroscopy (FTIR). After activation, several sorption mechanisms (i.e. precipitation, electrostatic outer- and inner-sphere complexation) were responsible for the higher sorption capacity of CMACW as compared with MACW (8.55 vs. 7.28 mg g(-1)). Sorption kinetics and isotherms fitted better with the pseudo-second-order and Langmuir models as compared with the pseudo-first-order and Freundlich models, respectively. In the gravity-fed drip irrigation system, the CMACW biofilter reduced the accumulation of Pb in radish roots and shoots and avoided reaching the toxic limits in some cases. Soil types had a significant effect on Pb(2+) bioavailability because of the difference in sorption ability. Findings from this study showed that CMACW biofilter can be used as a safeguard for wastewater irrigation. PMID:27393935

  11. Riparian Cottonwood Ecosystems and Regulated Flows in Kootenai and Yakima Sub-Basins : Volume I Kootenai River (Overview, Report and Appendices).

    Energy Technology Data Exchange (ETDEWEB)

    Jamieson, Bob; Braatne, Jeffrey H.

    2001-10-01

    Riparian vegetation and especially cottonwood and willow plant communities are dependent on normative flows and especially, spring freshette, to provide conditions for recruitment. These plant communities therefore share much in common with a range of fish species that require natural flow conditions to stimulate reproduction. We applied tools and techniques developed in other areas to assess riparian vegetation in two very different sub-basins within the Columbia Basin. Our objectives were to: Document the historic impact of human activity on alluvial floodplain areas in both sub-basins; Provide an analysis of the impacts of flow regulation on riparian vegetation in two systems with very different flow regulation systems; Demonstrate that altered spring flows will, in fact, result in recruitment to cottonwood stands, given other land uses impacts on each river and the limitations imposed by other flow requirements; and Assess the applicability of remote sensing tools for documenting the distribution and health of cottonwood stands and riparian vegetation that can be used in other sub-basins.

  12. Glycosylation-mediated phenylpropanoid partitioning in Populus tremuloides cell cultures

    Directory of Open Access Journals (Sweden)

    Babst Benjamin A

    2009-12-01

    Full Text Available Abstract Background Phenylpropanoid-derived phenolic glycosides (PGs and condensed tannins (CTs comprise large, multi-purpose non-structural carbon sinks in Populus. A negative correlation between PG and CT concentrations has been observed in several studies. However, the molecular mechanism underlying the relationship is not known. Results Populus cell cultures produce CTs but not PGs under normal conditions. Feeding salicyl alcohol resulted in accumulation of salicins, the simplest PG, in the cells, but not higher-order PGs. Salicin accrual reflected the stimulation of a glycosylation response which altered a number of metabolic activities. We utilized this suspension cell feeding system as a model for analyzing the possible role of glycosylation in regulating the metabolic competition between PG formation, CT synthesis and growth. Cells accumulated salicins in a dose-dependent manner following salicyl alcohol feeding. Higher feeding levels led to a decrease in cellular CT concentrations (at 5 or 10 mM, and a negative effect on cell growth (at 10 mM. The competition between salicin and CT formation was reciprocal, and depended on the metabolic status of the cells. We analyzed gene expression changes between controls and cells fed with 5 mM salicyl alcohol for 48 hr, a time point when salicin accumulation was near maximum and CT synthesis was reduced, with no effect on growth. Several stress-responsive genes were up-regulated, suggestive of a general stress response in the fed cells. Salicyl alcohol feeding also induced expression of genes associated with sucrose catabolism, glycolysis and the Krebs cycle. Transcript levels of phenylalanine ammonia lyase and most of the flavonoid pathway genes were reduced, consistent with down-regulated CT synthesis. Conclusions Exogenous salicyl alcohol was readily glycosylated in Populus cell cultures, a process that altered sugar utilization and phenolic partitioning in the cells. Using this system, we

  13. Response of Populus x canescens (Populus tremula x alba) to high concentration of NaCl stress

    Institute of Scientific and Technical Information of China (English)

    GAO Jian; PENG Zhen-hua

    2006-01-01

    Populus x canescens was cultivated on solid substrate and treated by salt (150 mM NaCl). The growth parametersincluding new leaf formation, height increment, diameter at the base increment, fresh and dry mass of leaf, stem, coarse root, and fine root were determined. The nutrient elements in leaves of samples under salt stress and the control, and the chlorophyll fluorescence of plants separated dark and light, initial fluorescence (Fo), and maximum fluorescence (Fm) were measured. Results showed that 150 mM NaCl treatment resulted in growth reduction of Populus x canescens. Nutrient element contents in the foliage of plants under salt stress were different from that of control. The foliar N-concentrations of plants under salt stress were not affected. Contents of Na under salt stress were 120 times as much as that under control. However, contents of S, K, P, Ca, Mg, Fe, Mn under salt stress were less than that under control. Salt stress caused damage in the PSII reaction centers, i.e. photo-inhibition couldn't be repaired under dark situation. The yield of chlorophyll fluorescence showed that several parameters associated with PSII functions, e.g. Fv/Fo, Fv/Fm were not influenced at the first stage of salt stress treatment. However, after a period of time, PSII functions were significantly inhibited, which led to the decrease of carbon assimilation. These results suggest that salt stress (150 mM NaCl) did not affect photosynthetic chlorophyll fluorescence of Populus x canescens immediately. After four day of salt stress, PSII reaction centres were seriously damaged during photo-inhibition.

  14. Initial characterization of shade avoidance response suggests functional diversity between Populus phytochrome B genes.

    Energy Technology Data Exchange (ETDEWEB)

    Karve, Abhijit A [ORNL; Weston, David [ORNL; Jawdy, Sara [ORNL; Gunter, Lee E [ORNL; Allen, Sara M [ORNL; Yang, Xiaohan [ORNL; Wullschleger, Stan D [ORNL; Tuskan, Gerald A [ORNL

    2012-01-01

    Shade avoidance signaling in higher plants involves perception of the incident red/far-red (R/FR) light by phytochromes and the modulation of downstream transcriptional networks to regulate developmental plasticity in relation to heterogeneous light environments. In this study, we characterized the expression and functional features of Populus phytochrome (PHY) gene family as well as the transcriptional responses of Populus to the changes in R/FR light. Expression data indicated that PHYA is the predominant PHY in the dark grown Populus seedling whereas PHYBs are most abundant in mature tissue types. Out of three Populus PHYs, PHYA is light labile and localized to cytosol in dark whereas both PHYB1 and PHYB2 are light stable and are localized to nucleus in mesophyll protoplasts. When expressed in Arabidopsis, PHYB1 rescued Arabidopsis phyB mutant phenotype whereas PHYB2 did not, suggesting functional diversification between these two gene family members. However, phenotypes of transgenic Populus lines with altered expression of PHYB1, PHYB2 or both and the expression of candidate shade response genes in these transgenic lines suggest that PHYB1 and PHYB2 may have distinct yet overlapping functions. The RNAseq results and analysis of Populus exposed to enriched-FR light indicate that genes associated in cell wall modification and brassinosteroid signaling were induced under far red light. Overall our data indicate that Populus transcriptional responses are at least partially conserved with Arabidopsis.

  15. Cross Breeding of Populus and Its Hybrids for Cold Resistance

    Institute of Scientific and Technical Information of China (English)

    2005-01-01

    Populus tomentosa was crossed with P. tremuloidis, P. grandidentata, P. alba × P. grandidentata and P. alba × Ulmus pumila in order to maintain its rapid growth and high wood quality and improve its resistance to cold. Two methods were used to increase the germination rate from 1.5% to 41.1% and the remaining rate from 1.7% to 44.2%. Forty crossing combinations were conducted and 2 744 hybrid seedlings were obtained. MX4 × P. grandidentata (G-1-58), MX3 × P. tremuloidis (T-44-60), MX2 × P. tremuloidis (l-13-87-37) and MX2 × (P. alba × P. grandidentata) were regarded as superior combinations after analysis and selection. Thirty seedlings of these combinations and 11 triploid seedlings identified by counting their chromosomes were selected as super plants.

  16. Establishment of cell suspension line of Populus tomentosa Carr

    Institute of Scientific and Technical Information of China (English)

    YAO Na; ZHANG Zhi-yi; AN Xin-min; YANG Kai

    2008-01-01

    Leaves of fine Populus tomentosa genotype TC152 were used as explants to establish cell suspension lines. The effects of plant growth regulators on callus induction and establishment of cell suspension lines were studied. The callus induction rate was the highest on a MS solid medium supplemented with 1.0 mg·L-1 2,4-D. A cell suspension line could be obtained by inoculating calli which were not subeultured into a MS liquid medium supplemented with 1.5 mg·L-1 2,4-D. The best subculture medium was MS+ 0.8 mg·L-1 2,4-D + 30 g·L-1 sucrose with a subculture cycle of seven days.

  17. RAPD markers related to sex locus in Populus tomentosa

    Institute of Scientific and Technical Information of China (English)

    Wanwei HOU; Junfeng FAN; Feimei ZHOU; Shufang ZHAO

    2009-01-01

    By using the methods of random amplified polymorphic DNA (RAPD) and bulked segregate analysis (BSA), we identified markers that are linked to the sex determination in the dioecious Populus tomentosa. Male and female bulks were created through rough mixing equal amounts of its five individual DNA. A total of 88 primers were screened. Twelve primers produced clear patterns with at least one band that appeared to be polymorphic between the two bulks. Subsequently, five male and female individuals were analyzed with those 12 primers, and only S60 (ACCCGGTCAC) could generate a common 1800bp DNA fragment in all five male individuals and male pool but not in any female individuals. It can be concluded that the gender of P. tomentosa is most likely connected to the S60-1800bp DNA fragment and RAPD markers. S60, therefore, can be used for selecting the gender of P. tomentosa.

  18. Effects of Fertilization Treatments on Plantation Growth of Triploid Clones in Populus tomentosa

    Institute of Scientific and Technical Information of China (English)

    Wang Lixian; Liu Yong; Zhang Zhiyi

    2003-01-01

    With four clones of triploid Populus tomentosa as materials, the effects of fertilization treatment on growth and physiological characters in terms of leaf nitrogen content, phosphorous content, potassium content, net photosynthetic rate, transpiration rate, water utilization efficiency and chlorophyll content have been studied. Compared with the general fertilizer as a control, the long-effect fertilizer, especially for Populus, produce more favorable results, for P. tomentosa on sandy land.

  19. Black Consciousness

    Science.gov (United States)

    Hraba, Joseph; Siegman, Jack

    1974-01-01

    Black militancy is treated as an instance of class consciousness with criteria and scales developed to measure black consciousness and "self-placement" into black consciousness. These dimensions are then investigated with respect to the social and symbolic participation in the ideology of the black movement on the part of a sample of black…

  20. Bud phenology and growth are subject to divergent selection across a latitudinal gradient in Populus angustifolia and impact adaptation across the distributional range and associated arthropods.

    Science.gov (United States)

    Evans, Luke M; Kaluthota, Sobadini; Pearce, David W; Allan, Gerard J; Floate, Kevin; Rood, Stewart B; Whitham, Thomas G

    2016-07-01

    Temperate forest tree species that span large geographical areas and climatic gradients often have high levels of genetic variation. Such species are ideal for testing how neutral demographic factors and climate-driven selection structure genetic variation within species, and how this genetic variation can affect ecological communities. Here, we quantified genetic variation in vegetative phenology and growth traits in narrowleaf cottonwood, Populus angustifolia, using three common gardens planted with genotypes originating from source populations spanning the species' range along the Rocky Mountains of North America (ca. 1700 km). We present three main findings. First, we found strong evidence of divergent selection (Q ST > F ST) on fall phenology (bud set) with adaptive consequences for frost avoidance. We also found evidence for selection on bud flush duration, tree height, and basal diameter, resulting in population differentiation. Second, we found strong associations with climate variables that were strongly correlated with latitude of origin. More strongly differentiated traits also showed stronger climate correlations, which emphasizes the role that climate has played in divergent selection throughout the range. We found population × garden interaction effects; for some traits, this accounted for more of the variance than either factor alone. Tree height was influenced by the difference in climate of the source and garden locations and declined with increasing transfer distance. Third, growth traits were correlated with dependent arthropod community diversity metrics. Synthesis. Overall, we conclude that climate has influenced genetic variation and structure in phenology and growth traits and leads to local adaptation in P. angustifolia, which can then impact dependent arthropod species. Importantly, relocation of genotypes far northward or southward often resulted in poor growth, likely due to a phenological mismatch with photoperiod, the proximate

  1. ANTIOXIDATIVE LOW MOLECULAR WEIGHT EXTRACTIVES FROM TRIPLOID POPULUS TOMENTOSA XYLEM

    Directory of Open Access Journals (Sweden)

    Yong-Hao Ni

    2011-02-01

    Full Text Available Triploid Populus tomentosa Carr. (Salicaceae is a good alternative to meet the increasing need of the global pulp and paper industry. Meanwhile, the xylem of this species could be a useful bioresource to develop low molecular extractives with significant bioactive potential. In the present work, a phytochemical investigation on aqueous EtOH extractives of Triploid P. tomentosa xylem, by systematical performance of Sephadex LH-20 open column chromatography and Thin Layer Chromatography (TLC, resulted in the isolation of two phenolic acids (ρ-coumaric acid (I and caffeic acid (II, two flavonoids (apigenin (III and luteolin (IV, and three phenolic glucosides (salicortin (V, salireposide (VI and populoside (VII. The structure elucidation and determination of the isolated extractives were based on their spectroscopical data and physiochemical evidences. This was the first time to report the low molecular weight extractives of Triploid P. tomentosa. Various low molecular weight extractives from Triploid P. tomentosa xylem exhibited significant antioxidative activities by DPPH and hydroxyl radical scavenging assays.

  2. Widespread triploidy in Western North American aspen (Populus tremuloides).

    Science.gov (United States)

    Mock, Karen E; Callahan, Colin M; Islam-Faridi, M Nurul; Shaw, John D; Rai, Hardeep S; Sanderson, Stewart C; Rowe, Carol A; Ryel, Ronald J; Madritch, Michael D; Gardner, Richard S; Wolf, Paul G

    2012-01-01

    We document high rates of triploidy in aspen (Populus tremuloides) across the western USA (up to 69% of genets), and ask whether the incidence of triploidy across the species range corresponds with latitude, glacial history (as has been documented in other species), climate, or regional variance in clone size. Using a combination of microsatellite genotyping, flow cytometry, and cytology, we demonstrate that triploidy is highest in unglaciated, drought-prone regions of North America, where the largest clone sizes have been reported for this species. While we cannot completely rule out a low incidence of undetected aneuploidy, tetraploidy or duplicated loci, our evidence suggests that these phenomena are unlikely to be significant contributors to our observed patterns. We suggest that the distribution of triploid aspen is due to a positive synergy between triploidy and ecological factors driving clonality. Although triploids are expected to have low fertility, they are hypothesized to be an evolutionary link to sexual tetraploidy. Thus, interactions between clonality and polyploidy may be a broadly important component of geographic speciation patterns in perennial plants. Further, cytotypes are expected to show physiological and structural differences which may influence susceptibility to ecological factors such as drought, and we suggest that cytotype may be a significant and previously overlooked factor in recent patterns of high aspen mortality in the southwestern portion of the species range. Finally, triploidy should be carefully considered as a source of variance in genomic and ecological studies of aspen, particularly in western U.S. landscapes.

  3. Genetic diversity in Populus nigra plantations from west of Iran

    Directory of Open Access Journals (Sweden)

    Afrooz Alimohamadi

    2012-11-01

    Full Text Available In order to adopt strategies for forest conservation and development,it is necessary to estimate the amount and distribution of genetic diversity in existing populations of poplar in Iran. In this study, the genetic diversity between eight stands of Populus nigra established in Kermanshah province was evaluated on the basis of molecular and morphological markers. To amplify microsatellite loci (WPMS09, WPMS16 and WPMS18, DNA extraction from young and fresh leaveswas done. Various conditions of the PCR assay were examined and to evaluate the morphological variation of the morphological characters leaves (consist of 19 traits were measured. In addition, height growth was measured, to evaluate the growth function of the stands in homogeneous conditions. Genetic diversity in termof polymorphic loci was 0%, because three investigated microsatellite loci were monomorphic. The total number of alleles for 3 microsatellite loci was 6 (na = 2, ne = 2, heo = 1, hee = 0.51. Genetic identity based on Nei was 100%, so genetic distance was 0%. The whole sampled trees represented the same thus the genotype. No significant differences between the mean values of all morphological characters and height growth were revealed. Observed genetic similarity gave indication that same ramets had been selected to plant in poplar plantation established in Kermanshah province.These results suggest the need for an initial evaluation of the genetic diversity in selected ramets for planting in plantation to avoid repetition.

  4. Establishment of in vitro culture of Populus euphratica Olivier

    Institute of Scientific and Technical Information of China (English)

    Zhao Peng; Dong Zhan-yuan; Sun Hong-bin; Zhao Ju-ying; Wang Hua-fang

    2006-01-01

    The purpose of our study was to establish a regeneration system for micropropagation of Populus euphratica Olivier. On the basis of an analysis of plant leaf mineral nutrients, a special medium was proposed, called MP2. In optimizing media for in vitro plant cultures including MS, B5 and MP2 media we employed hormones, auxin IAA, cytokine benzyladenine (BAP) and gibberellic acid (GA) in our factorial experiments on media. Adventitious shoots were derived from cuttings of adult plants taken from Xingjiang, west China, on selected media with MP2 + 0.5 mg.L-1 BA + 0.1 mg·L-1 NAA. The shoots were elongated on a medium with 0.25mg.L-1 BAP, 0.1 mg.L-1NAA and 2 mg·L-1 GA and were then rooted on a medium with 0.2-0.5 mg·L-1 IBA. All the media were incorporated with 30 g·L-1 sucrose and an adjusted pH at 6.3.

  5. Genetic diversity in Populus nigra plantations from west of Iran

    Directory of Open Access Journals (Sweden)

    Afrooz Alimohamadi

    2012-12-01

    Full Text Available In order to adopt strategies for forest conservation and development, it is necessary to estimate the amount and distribution of genetic diversity in existing populations of poplar in Iran. In this study, the genetic diversity between eight stands of Populus nigra established in Kermanshah province was evaluated on the basis of molecular and morphological markers. To amplify microsatellite loci (WPMS09, WPMS16 and WPMS18, DNA extraction from young and fresh leaveswas done. Various conditions of the PCR assay were examined and to evaluate the morphological variation of the morphological characters leaves (consist of 19 traits were measured. In addition, height growth was measured, to evaluate the growth function of the stands in homogeneous conditions. Genetic diversity in term of polymorphic loci was 0%, because three investigated microsatellite loci were monomorphic. The total number of alleles for 3 microsatellite loci was 6 (na = 2, ne = 2, heo = 1, hee = 0.51. Genetic identity based on Nei was 100%, so genetic distance was 0%. The whole sampled trees represented the same thus the genotype. No significant differences between the mean values of all morphological characters and height growth were revealed. Observed genetic similarity gave indication that same ramets had been selected to plant in poplar plantation established in Kermanshah province. These results suggest the need for an initial evaluation of the genetic diversity in selected ramets for planting in plantation to avoid repetition.  

  6. Construction of cDNA Library from Populus euphratica

    Institute of Scientific and Technical Information of China (English)

    Yu Guangjun; Wang Yiqin; Shen Xin

    2003-01-01

    In order to isolate and clone salt-tolerance involved genes of Populus euphratica, we constructed a cDNA library from salt-treated leaves of P. euphratica. In the experiment, double strand cDNA were synthesized by a beads-based method. The syntheses of the first strand and the second strand cDNA, adapter ligation and restriction reaction for releasing cDNA were all conducted on the beads. The double strand cDNA were released from magnetic beads by digestion with NotI, and cDNA fragments smaller than 500 bp and residual adapters were removed through cDNA size fractionation columns. Finally, double strand cDNA were directionally cloned intoλExcell vector. The results show that the primary titer of the cDNA library is 7.46×106 pfu per mL and the packaging efficiency reaches 1.47×107 recombinants per μg DNA. λDNA extracted from two clones of plaque were digested by EcoR I and NotI, both of the clones contained inserts larger than 900 bp. These results show that the cDNA library of salt-treated P. euphratica leaves has been successfully constructed.

  7. Lignin Characterization of Triploid Clones of Populus tomentosa Carr.

    Institute of Scientific and Technical Information of China (English)

    Jin Xiao-juan; Pu Jun-wen; Xie Yi-min; Takeshi Furuno; Liu Xin-yu

    2005-01-01

    In order to understand the structural characteristics of lignin in triploid clones ofPopulus tomentosa and its changes in the processes of pulping and bleaching, milled wood lignin (MWL), lignin carbohydrate complex (LCC) and the residual lignin from kraft pulp (KP) and sulfite pulp (SP) were isolated and analyzed by Fourier transform infrared (FTIR) spectrum and 13C nuclear magnetic resonance (NMR). The most diagnostic peaks were assigned and the differences were discussed. The spectral patterns reveal that triploid P. tomentosa shows the specific features of hardwood from temperate areas, but in the spectrum of FTIR, the strength ratio of A1270 cm-1 to A1226 cm-1 is 0.88, higher than the average of hardwood from temperate areas, which will make the lignin delignification more difficult during pulping and bleaching. The LCC from triploid P. tomentosa is mainly composed of xyloglucan and glucuronic acid, and other glucides have much lower ratio. In LCC FTIR, there are three peaks at 1 427, 1 329 and 1046 cm--1, indicating that both semi-cellulose and cellulose could exist in LCC, and that there might be relationships between cellulose and lignin. Compared with the residual lignin from KP and SP, the condensed structure in KP is more than that in SP.

  8. Black Droplets

    CERN Document Server

    Santos, Jorge E

    2014-01-01

    Black droplets and black funnels are gravitational duals to states of a large N, strongly coupled CFT on a fixed black hole background. We numerically construct black droplets corresponding to a CFT on a Schwarzchild background with finite asymptotic temperature. We find two branches of such droplet solutions which meet at a turning point. Our results suggest that the equilibrium black droplet solution does not exist, which would imply that the Hartle-Hawking state in this system is dual to the black funnel constructed in \\cite{Santos:2012he}. We also compute the holographic stress energy tensor and match its asymptotic behaviour to perturbation theory.

  9. Black Eye

    Science.gov (United States)

    ... eyesight if not treated. If both eyes are black after a head injury, it could signify a skull fracture or other serious injury. Next Black Eye Symptoms Related Ask an Ophthalmologist Answers How ...

  10. [Proof of the indigenous nature of Populus alba L. in the western Mediterranean Basin].

    Science.gov (United States)

    Roiron, Paul; Ali, Adam A; Guendon, Jean-Louis; Carcaillet, Christopher; Terral, Jean-Frédéric

    2004-02-01

    Around the western Mediterranean Basin, the ecological status of Populus alba, whether indigenous or introduced, is controversial. This note presents new palaeobotanical data based on analyses of leaf imprints from a travertine formation located in southern France. This travertine presents two levels with Populus alba imprints. The oldest level is dated back by 14C to the Early Holocene, i.e., 8890 +/- 70 BP. This demonstrates that Populus alba is an autochthonous species of the southern-France vegetation, removing speculations reporting that its distribution area was greatly influenced by Roman civilization. Finally, we discuss this new data in regard to other Pleistocene and Holocene deposits circum the Mediterranean Basin and in Europe, where this species was identified. PMID:15060983

  11. Black Holes

    Science.gov (United States)

    Luminet, Jean-Pierre

    1992-09-01

    Foreword to the French edition; Foreword to the English edition; Acknowledgements; Part I. Gravitation and Light: 1. First fruits; 2. Relativity; 3. Curved space-time; Part II. Exquisite Corpses: 4. Chronicle of the twilight years; 5. Ashes and diamonds; 6. Supernovae; 7. Pulsars; 8. Gravitation triumphant; Part III. Light Assassinated: 9. The far horizon; 10. Illuminations; 11. A descent into the maelstrom; 12. Map games; 13. The black hole machine; 14. The quantum black hole; Part IV. Light Regained: 15. Primordial black holes; 16. The zoo of X-ray stars; 17. Giant black holes; 18. Gravitational light; 19. The black hole Universe; Appendices; Bibliography; Name index; Subject index.

  12. Alteration of PHYA expression change circadian rhythms and timing of bud set in Populus.

    Science.gov (United States)

    Kozarewa, Iwanka; Ibáñez, Cristian; Johansson, Mikael; Ogren, Erling; Mozley, David; Nylander, Eva; Chono, Makiko; Moritz, Thomas; Eriksson, Maria E

    2010-05-01

    In many temperate woody species, dormancy is induced by short photoperiods. Earlier studies have shown that the photoreceptor phytochrome A (phyA) promotes growth. Specifically, Populus plants that over-express the oat PHYA gene (oatPHYAox) show daylength-independent growth and do not become dormant. However, we show that oatPHYAox plants could be induced to set bud and become cold hardy by exposure to a shorter, non-24 h diurnal cycle that significantly alters the relative position between endogenous rhythms and perceived light/dark cycles. Furthermore, we describe studies in which the expression of endogenous Populus tremula x P. tremuloides PHYTOCHROME A (PttPHYA) was reduced in Populus trees by antisense inhibition. The antisense plants showed altered photoperiodic requirements, resulting in earlier growth cessation and bud formation in response to daylength shortening, an effect that was explained by an altered innate period that leads to phase changes of clock-associated genes such as PttCO2. Moreover, gene expression studies following far-red light pulses show a phyA-mediated repression of PttLHY1 and an induction of PttFKF1 and PttFT. We conclude that the level of PttPHYA expression strongly influences seasonally regulated growth in Populus and is central to co-ordination between internal clock-regulated rhythms and external light/dark cycles through its dual effect on the pace of clock rhythms and in light signaling.

  13. Environmental Influences on Wood Chemistry and Density of Populus and Loblolly Pine

    Energy Technology Data Exchange (ETDEWEB)

    Tuskan, G.A.

    2006-08-11

    The objectives of the study are to: (1) determine the degree to which physical and chemical wood properties vary in association with environmental and silvicultural practices in Populus and loblolly pine and (2) develop and verify species-specific empirical models in an effort to create a framework for understanding environmental influences on wood quality.

  14. Identification of quantitative trait loci and candidate genes for cadmium tolerance in Populus

    Energy Technology Data Exchange (ETDEWEB)

    Induri, Brahma R [West Virginia University; Ellis, Danielle R [West Virginia University; Slavov, Goncho T. [West Virginia University; Yin, Tongming [ORNL; Zhang, Xinye [ORNL; Tuskan, Gerald A [ORNL; DiFazio, Steven P [West Virginia University

    2012-01-01

    Understanding genetic variation for the response of Populus to heavy metals like cadmium (Cd) is an important step in elucidating the underlying mechanisms of tolerance. In this study, a pseudo-backcross pedigree of Populus trichocarpa Torr. & Gray and Populus deltoides Bart. was characterized for growth and performance traits after Cd exposure. A total of 16 quantitative trait loci (QTL) at logarithm of odds (LOD) ratio 2.5 were detected for total dry weight, its components and root volume. Major QTL for Cd responses were mapped to two different linkage groups and the relative allelic effects were in opposing directions on the two chromosomes, suggesting differential mechanisms at these two loci. The phenotypic variance explained by Cd QTL ranged from 5.9 to 11.6% and averaged 8.2% across all QTL. A whole-genome microarray study led to the identification of nine Cd-responsive genes from these QTL. Promising candidates for Cd tolerance include an NHL repeat membrane-spanning protein, a metal transporter and a putative transcription factor. Additional candidates in the QTL intervals include a putative homolog of a glutamate cysteine ligase, and a glutathione-S-transferase. Functional characterization of these candidate genes should enhance our understanding of Cd metabolism and transport and phytoremediation capabilities of Populus.

  15. Litter Quality of Populus Species as Affected by Free-Air CO2

    NARCIS (Netherlands)

    Vermue, E.; Buurman, P.; Hoosbeek, M.R.

    2009-01-01

    The effect of elevated CO2 and nitrogen fertilization on the molecular chemistry of litter of three Populus species and associated soil organic matter (SOM) was investigated by pyrolysis-gas chromatography/mass spectrometry. The results are based on 147 quantified organic compounds in 24 litter samp

  16. Genome-wide analysis of the structural genes regulating defense phenylpropanoid metabolism in Populus

    Energy Technology Data Exchange (ETDEWEB)

    Tschaplinski, Timothy J [ORNL; Tsai, Chung-Jui [Michigan Technological University; Harding, Scott A [Michigan Technological University; Lindroth, richard L [University of Wisconsin, Madison; Yuan, Yinan [Michigan Technological University

    2006-01-01

    Salicin-based phenolic glycosides, hydroxycinnamate derivatives and flavonoid-derived condensed tannins comprise up to one-third of Populus leaf dry mass. Genes regulating the abundance and chemical diversity of these substances have not been comprehensively analysed in tree species exhibiting this metabolically demanding level of phenolic metabolism. Here, shikimate-phenylpropanoid pathway genes thought to give rise to these phenolic products were annotated from the Populus genome, their expression assessed by semiquantitative or quantitative reverse transcription polymerase chain reaction (PCR), and metabolic evidence for function presented. Unlike Arabidopsis, Populus leaves accumulate an array of hydroxycinnamoyl-quinate esters, which is consistent with broadened function of the expanded hydroxycinnamoyl-CoA transferase gene family. Greater flavonoid pathway diversity is also represented, and flavonoid gene families are larger. Consistent with expanded pathway function, most of these genes were upregulated during wound-stimulated condensed tannin synthesis in leaves. The suite of Populus genes regulating phenylpropanoid product accumulation should have important application in managing phenolic carbon pools in relation to climate change and global carbon cycling.

  17. RepPop: a database for repetitive elements in Populus trichocarpa

    Directory of Open Access Journals (Sweden)

    Xu Ying

    2009-01-01

    Full Text Available Abstract Background Populus trichocarpa is the first tree genome to be completed, and its whole genome is currently being assembled. No functional annotation about the repetitive elements in the Populus trichocarpa genome is currently available. Results We predicted 9,623 repetitive elements in the Populus trichocarpa genome, and assigned functions to 3,075 of them (31.95%. The 9,623 repetitive elements cover ~40% of the current (partially assembled genome. Among the 9,623 repetitive elements, 668 have copies only in the contigs that have not been assigned to one of the 19 chromosome while the rest all have copies in the partially assembled chromosomes. Conclusion All the predicted data are organized into an easy-to-use web-browsable database, RepPop. Various search capabilities are provided against the RepPop database. A Wiki system has been set up to facilitate functional annotation and curation of the repetitive elements by a community rather than just the database developer. The database RepPop will facilitate the assembling and functional characterization of the Populus trichocarpa genome.

  18. ADVANCE IN RESEARCH ON DROUGHT RESISTANCE OF POPULUS%杨树抗旱性研究进展

    Institute of Scientific and Technical Information of China (English)

    尹春英; 李春阳

    2003-01-01

    The drought resistance of woody plants, in particular, Populus, was reviewed in this paper. Studies about drought resistance of Populus mostly focused on changes in growth properties, physiological adaptation and biochemical aspects, but a few on molecular biology. The indexes of drought adaptation and productivity were analyzed and these indexes could be employed to identify drought resistance of woody plants. Combination of such different approaches will, hopefully, give us a more complete understanding of the various regulatory mechanisms in trees than what we may have today. With development of the molecular biology of woody plants, the sluties on stress resistance of Populus which was regarded as a model plant, are summarised. Ref 96

  19. Black Culture

    Directory of Open Access Journals (Sweden)

    Angela Khristin Brown

    2013-07-01

    Full Text Available The migration of blacks in North America through slavery became united.  The population of blacks past downs a tradition of artist through art to native born citizens. The art tradition involved telling stories to each generation in black families. The black culture elevated by tradition created hope to determine their personal freedom to escape from poverty of enslavement and to establish a way of life through tradition. A way of personal freedoms was through getting a good education that lead to a better foundation and a better way of life. 

  20. Identification of Quantitative Trait Loci (QTL) and Candidate Genes for Cadmium Tolerance in Populus

    Energy Technology Data Exchange (ETDEWEB)

    Induri, Brahma R [West Virginia University; Ellis, Danielle R [West Virginia University; Slavov, Gancho [West Virginia University; Yin, Tongming [ORNL; Muchero, Wellington [ORNL; Tuskan, Gerald A [ORNL; DiFazio, Stephen P [West Virginia University

    2012-01-01

    Knowledge of genetic variation in response of Populus to heavy metals like cadmium (Cd) is an important step in understanding the underlying mechanisms of tolerance. In this study, a pseudo-backcross pedigree of Populus trichocarpa and Populus deltoides was characterized for Cd exposure. The pedigree showed significant variation for Cd tolerance thus enabling the identification of relatively tolerant and susceptible genotypes for intensive characterization. A total of 16 QTLs at logarithm of odds (LOD) ratio > 2.5, were found to be associated with total dry weight, its components, and root volume. Four major QTLs for total dry weight were mapped to different linkage groups in control (LG III) and Cd conditions (LG XVI) and had opposite allelic effects on Cd tolerance, suggesting that these genomic regions were differentially controlled. The phenotypic variation explained by Cd QTL for all traits under study varied from 5.9% to 11.6% and averaged 8.2% across all QTL. Leaf Cd contents also showed significant variation suggesting the phytoextraction potential of Populus genotypes, though heritability of this trait was low (0.22). A whole-genome microarray study was conducted by using two genotypes with extreme responses for Cd tolerance in the above study and differentially expressed genes were identified. Candidate genes including CAD2 (CADMIUM SENSITIVE 2), HMA5 (HEAVY METAL ATPase5), ATGTST1 (Arabidopsis thaliana Glutathione S-Transferase1), ATGPX6 (Glutathione peroxidase 6), and ATMRP 14 (Arabidopsis thaliana Multidrug Resistance associated Protein 14) were identified from QTL intervals and microarray study. Functional characterization of these candidate genes could enhance phytoremediation capabilities of Populus.

  1. Aldehyde Dehydrogenase Gene Superfamily in Populus: Organization and Expression Divergence between Paralogous Gene Pairs.

    Directory of Open Access Journals (Sweden)

    Feng-Xia Tian

    Full Text Available Aldehyde dehydrogenases (ALDHs constitute a superfamily of NAD(P+-dependent enzymes that catalyze the irreversible oxidation of a wide range of reactive aldehydes to their corresponding nontoxic carboxylic acids. ALDHs have been studied in many organisms from bacteria to mammals; however, no systematic analyses incorporating genome organization, gene structure, expression profiles, and cis-acting elements have been conducted in the model tree species Populus trichocarpa thus far. In this study, a comprehensive analysis of the Populus ALDH gene superfamily was performed. A total of 26 Populus ALDH genes were found to be distributed across 12 chromosomes. Genomic organization analysis indicated that purifying selection may have played a pivotal role in the retention and maintenance of PtALDH gene families. The exon-intron organizations of PtALDHs were highly conserved within the same family, suggesting that the members of the same family also may have conserved functionalities. Microarray data and qRT-PCR analysis indicated that most PtALDHs had distinct tissue-specific expression patterns. The specificity of cis-acting elements in the promoter regions of the PtALDHs and the divergence of expression patterns between nine paralogous PtALDH gene pairs suggested that gene duplications may have freed the duplicate genes from the functional constraints. The expression levels of some ALDHs were up- or down-regulated by various abiotic stresses, implying that the products of these genes may be involved in the adaptation of Populus to abiotic stresses. Overall, the data obtained from our investigation contribute to a better understanding of the complexity of the Populus ALDH gene superfamily and provide insights into the function and evolution of ALDH gene families in vascular plants.

  2. Will changes in root-zone temperature in boreal spring affect recovery of photosynthesis in Picea mariana and Populus tremuloides in a future climate?

    Science.gov (United States)

    Fréchette, Emmanuelle; Ensminger, Ingo; Bergeron, Yves; Gessler, Arthur; Berninger, Frank

    2011-11-01

    Future climate will alter the soil cover of mosses and snow depths in the boreal forests of eastern Canada. In field manipulation experiments, we assessed the effects of varying moss and snow depths on the physiology of black spruce (Picea -mariana (Mill.) B.S.P.) and trembling aspen (Populus tremuloides Michx.) in the boreal black spruce forest of western Québec. For 1 year, naturally regenerated 10-year-old spruce and aspen were grown with one of the following treatments: additional N fertilization, addition of sphagnum moss cover, removal of mosses, delayed soil thawing through snow and hay addition, or accelerated soil thawing through springtime snow removal. Treatments that involved the addition of insulating moss or snow in the spring caused lower soil temperature, while removing moss and snow in the spring caused elevated soil temperature and thus had a warming effect. Soil warming treatments were associated with greater temperature variability. Additional soil cover, whether moss or snow, increased the rate of photosynthetic recovery in the spring. Moss and snow removal, on the other hand, had the opposite effect and lowered photosynthetic activity, especially in spruce. Maximal electron transport rate (ETR(max)) was, for spruce, 39.5% lower after moss removal than with moss addition, and 16.3% lower with accelerated thawing than with delayed thawing. Impaired photosynthetic recovery in the absence of insulating moss or snow covers was associated with lower foliar N concentrations. Both species were affected in that way, but trembling aspen generally reacted less strongly to all treatments. Our results indicate that a clear negative response of black spruce to changes in root-zone temperature should be anticipated in a future climate. Reduced moss cover and snow depth could adversely affect the photosynthetic capacities of black spruce, while having only minor effects on trembling aspen. PMID:22021010

  3. Distinct Microbial Communities within the Endosphere and Rhizosphere of Populus deltoides Roots across Contrasting Soil Types ▿†

    OpenAIRE

    Gottel, Neil R.; Castro, Hector F.; Kerley, Marilyn; Yang, Zamin; Pelletier, Dale A.; Podar, Mircea; Karpinets, Tatiana; Uberbacher, Ed; Tuskan, Gerald A.; Vilgalys, Rytas; Doktycz, Mitchel J.; Schadt, Christopher W.

    2011-01-01

    The root-rhizosphere interface of Populus is the nexus of a variety of associations between bacteria, fungi, and the host plant and an ideal model for studying interactions between plants and microorganisms. However, such studies have generally been confined to greenhouse and plantation systems. Here we analyze microbial communities from the root endophytic and rhizospheric habitats of Populus deltoides in mature natural trees from both upland and bottomland sites in central Tennessee. Commun...

  4. Genome resequencing in Populus: Revealing large-scale genome variation and implications on specialized-trait genomics

    Energy Technology Data Exchange (ETDEWEB)

    Muchero, Wellington [ORNL; Labbe, Jessy L [ORNL; Priya, Ranjan [University of Tennessee, Knoxville (UTK); DiFazio, Steven P [West Virginia University, Morgantown; Tuskan, Gerald A [ORNL

    2014-01-01

    To date, Populus ranks among a few plant species with a complete genome sequence and other highly developed genomic resources. With the first genome sequence among all tree species, Populus has been adopted as a suitable model organism for genomic studies in trees. However, far from being just a model species, Populus is a key renewable economic resource that plays a significant role in providing raw materials for the biofuel and pulp and paper industries. Therefore, aside from leading frontiers of basic tree molecular biology and ecological research, Populus leads frontiers in addressing global economic challenges related to fuel and fiber production. The latter fact suggests that research aimed at improving quality and quantity of Populus as a raw material will likely drive the pursuit of more targeted and deeper research in order to unlock the economic potential tied in molecular biology processes that drive this tree species. Advances in genome sequence-driven technologies, such as resequencing individual genotypes, which in turn facilitates large scale SNP discovery and identification of large scale polymorphisms are key determinants of future success in these initiatives. In this treatise we discuss implications of genome sequence-enable technologies on Populus genomic and genetic studies of complex and specialized-traits.

  5. Knockdown of a Laccase in Populus deltoides Confers Altered Cell Wall Chemistry and Increased Sugar Release

    Energy Technology Data Exchange (ETDEWEB)

    Bryan, Anthony C.; Jawdy, Sara; Gunter, Lee; Gjersing, Erica; Sykes, Robert; Hinchee, Maud A. W.; Winkeler, Kimberly A.; Collins, Cassandra M.; Engle, Nancy; Tschaplinski, Timothy J.; Yang, Xiaohan; Tuskan, Gerald A.; Muchero, Wellington; Chen, Jin-Gui

    2016-10-01

    Plant laccases are thought to function in the oxidation of monolignols which leads to higher order lignin formation. Only a hand-full of laccases in plants have been functionally evaluated and as such little is known about the breadth of their impact on cell wall chemistry or structure. Here we describe a previously uncharacterized laccase from Populus, encoded by locus Potri.008G064000, whose reduced expression resulted in transgenic Populus trees with changes in syringyl/guaiacyl (S/G) ratios as well as altered sugar release phenotypes. These phenotypes are consistent with plant biomass exhibiting reduced recalcitrance. Interestingly, the transgene effect on recalcitrance is dependent on a mild pretreatment prior to chemical extraction of sugars. Metabolite profiling suggests the transgene modulates phenolics that are associated with the cell wall structure. We propose that this particular laccase has a range of functions related to oxidation of phenolics and conjugation of flavonoids that interact with lignin in the cell wall.

  6. Pollen development and multi-nucleate microspores of Populus bolleana Lauche

    Institute of Scientific and Technical Information of China (English)

    ZHANG Zheng-hai; KANG Xiang-yang; WANG Shang-de; LI Dai-li; CHEN Hong-wei

    2008-01-01

    Populus bolleana is a variety of P. alba, commonly used in poplar breeding programs in China. Developmental biology that involves staminate flowers, microsporogenesis and microgametogenesis ofP bolleana is essential for Populus improvement in cross breeding for better characteristics in sexual reproduction. Flower morphology and pollen development were described and illustrated using anatomical, sectioning and stain-clearing techniques. The results show that microsporocytes undergo a regular meioticprocess, but some multi-nucleate microspores occur at the microspore stage. It takes five days for microsporocytes to develop to mature pollen by forcing flower branches under greenhouse conditions. Additionally, an important relationship was found between stages of meiosis and anther colors. Microspore tetrads formed when the anther color turned yellow, whereas, when the pollen matured, the anther was red and the tapetum degenerated completely. When mature pollen grains are formed, flower buds develop into male eatkins. In the end, filament elongated and pollen grains were released from dehisced anthers.

  7. Black psyllium

    Science.gov (United States)

    ... block your throat or esophagus and may cause choking. Do not take this product if you have ... take enough water. Otherwise, black psyllium might cause choking. Take at least 150 mL water for each ...

  8. Black tea

    Science.gov (United States)

    ... product containing black tea extract plus green tea extract, asparagus, guarana, kidney bean, and mate along with a combination of kidney bean pods, garcinia, and chromium yeast for 12 weeks does not reduce body weight ...

  9. Black tea

    Science.gov (United States)

    ... heartburn, dizziness, ringing in the ears, convulsions, and confusion. Also, people who drink black tea or other ... glimepiride (Amaryl), glyburide (DiaBeta, Glynase PresTab, Micronase), insulin, pioglitazone (Actos), rosiglitazone (Avandia), chlorpropamide (Diabinese), glipizide (Glucotrol), tolbutamide ( ...

  10. Continental-scale assessment of genetic diversity and population structure in quaking aspen (Populus tremuloides)

    OpenAIRE

    Callahan, Colin M.; Rowe, Carol A.; Ryel, Ronald J.; Shaw, John D.; Madritch, Michael D.; Mock, Karen E.

    2013-01-01

    Aim: Quaking aspen (Populus tremuloides) has the largest natural distribution of any tree native to North America. The primary objectives of this study were to characterize range-wide genetic diversity and genetic structuring in quaking aspen, and to assess the influence of glacial history and rear-edge dynamics. Location: North America. Methods: Using a sample set representing the full longitudinal and latitudinal extent of the species’ distribution, we examined geographical patterns o...

  11. Successful Agrobacterium-mediated transformation of Populus tomentosa with apple SPDS gene

    Institute of Scientific and Technical Information of China (English)

    LIU Ting-ting; PANG Xiao-ming; LONG Cui; ZHANG Zhi-yi

    2008-01-01

    The problem of salinized soils has become one of the most serious constraints to agricultural and forest productivity. With the purpose of enhancing salt stress tolerance of Populus tomentosa, we transformed this tree species with spermidine synthase (SPDS) genes derived from an apple by an Agrobacterium-mediatod method. Four transgenic clones were confirmed by PCR and Southern blot analysis. As well, the expression of introduced SPDS genes was analyzed by real-time quantitative PCR.

  12. PROCESS OPTIMIZATION OF TETRA ACETYL ETHYLENE DIAMINE ACTIVATED HYDROGEN PEROXIDE BLEACHING OF POPULUS NIGRA CTMP

    OpenAIRE

    Qiang Zhao; Junwen Pu; Shulei Mao; Guibo Qi

    2010-01-01

    To enhance the bleaching efficiency, the activator of tetra acetyl ethylene diamine (TAED) was used in conventional H2O2 bleaching. The H2O2/TAED bleaching system can accelerate the reaction rate and shorten bleaching time at relative low temperature, which can reduce the production cost. In this research, the process with hydrogen peroxide activated by TAED bleaching of Populus nigra chemi-thermo mechanical pulp was optimized. Suitable bleaching conditions were confirmed as follows: pulp con...

  13. Genetic Variation in Functional Traits Influences Arthropod Community Composition in Aspen (Populus tremula L.)

    OpenAIRE

    Robinson, Kathryn M; Pär K Ingvarsson; Jansson, Stefan; Albrectsen, Benedicte R.

    2012-01-01

    We conducted a study of natural variation in functional leaf traits and herbivory in 116 clones of European aspen, Populus tremula L., the Swedish Aspen (SwAsp) collection, originating from ten degrees of latitude across Sweden and grown in a common garden. In surveys of phytophagous arthropods over two years, we found the aspen canopy supports nearly 100 morphospecies. We identified significant broad-sense heritability of plant functional traits, basic plant defence chemistry, and arthropod ...

  14. Plants remember past weather: a study for atmospheric pollen concentrations of Ambrosia, Poaceae and Populus

    Science.gov (United States)

    Matyasovszky, István; Makra, László; Csépe, Zoltán; Sümeghy, Zoltán; Deák, Áron József; Pál-Molnár, Elemér; Tusnády, Gábor

    2015-10-01

    After extreme dry (wet) summers or years, pollen production of different taxa may decrease (increase) substantially. Accordingly, studying effects of current and past meteorological conditions on current pollen concentrations for different taxa have of major importance. The purpose of this study is separating the weight of current and past weather conditions influencing current pollen productions of three taxa. Two procedures, namely multiple correlations and factor analysis with special transformation are used. The 11-year (1997-2007) data sets include daily pollen counts of Ambrosia (ragweed), Poaceae (grasses) and Populus (poplar), as well as daily values of four climate variables (temperature, relative humidity, global solar flux and precipitation). Multiple correlations of daily pollen counts with simultaneous values of daily meteorological variables do not show annual course for Ambrosia, but do show definite trends for Populus and Poaceae. Results received using the two methods revealed characteristic similarities. For all the three taxa, the continental rainfall peak and additional local showers in the growing season can strengthen the weight of the current meteorological elements. However, due to the precipitation, big amount of water can be stored in the soil contributing to the effect of the past climate elements during dry periods. Higher climate sensitivity (especially water sensitivity) of the herbaceous taxa ( Ambrosia and Poaceae) can be definitely established compared to the arboreal Populus. Separation of the weight of the current and past weather conditions for different taxa involves practical importance both for health care and agricultural production.

  15. Estimating Stem Volume Using QuickBird Imagery and Allometric Relationships for Open Populus xiaohei Plantations

    Institute of Scientific and Technical Information of China (English)

    Xiao-Qing Wang; Zeng-Yuan Li; Xing-E Liu; Guang Deng; Ze-Hui Jiang

    2007-01-01

    There has been a great deal of interest in studying the crown of trees using remote sensing data. In this study, crown width was extracted from high-resolution QuickBird images for open Populus xiaohei plantations. Regression models for predicting the individual stem volumes of Populus xiaohei were established using extracted crown width, as well as estimated tree parameters (i.e. diameter at breast height [DBH] and tree height) as predictors. Our results indicated that crown width could be accurately extracted from QuickBird images using a multi-scale segmentation approach with a mean relative error of 5.74%, especially for wide-spacing stands. Using either extracted crown width alone or with estimated DBH and tree height can successfully estimate individual stem volume of Populus xiaohei with the R2 value ranging from 0.87 to 0.92 depending on different model forms. In particular, the two second-order polynomial models (model2 and model 6), based on QuickBird image-derived crown widths and estimated DBH and tree heights, respectively, were the best at describing the relationship between stem volume and tree characteristics.

  16. Isolation and characterization of cDNAs encoding leucoanthocyanidin reductase and anthocyanidin reductase from Populus trichocarpa.

    Directory of Open Access Journals (Sweden)

    Lijun Wang

    Full Text Available Proanthocyanidins (PAs contribute to poplar defense mechanisms against biotic and abiotic stresses. Transcripts of PA biosynthetic genes accumulated rapidly in response to infection by the fungus Marssonina brunnea f.sp. multigermtubi, treatments of salicylic acid (SA and wounding, resulting in PA accumulation in poplar leaves. Anthocyanidin reductase (ANR and leucoanthocyanidin reductase (LAR are two key enzymes of the PA biosynthesis that produce the main subunits: (+-catechin and (--epicatechin required for formation of PA polymers. In Populus, ANR and LAR are encoded by at least two and three highly related genes, respectively. In this study, we isolated and functionally characterized genes PtrANR1 and PtrLAR1 from P. trichocarpa. Phylogenetic analysis shows that Populus ANR1 and LAR1 occurr in two distinct phylogenetic lineages, but both genes have little difference in their tissue distribution, preferentially expressed in roots. Overexpression of PtrANR1 in poplar resulted in a significant increase in PA levels but no impact on catechin levels. Antisense down-regulation of PtrANR1 showed reduced PA accumulation in transgenic lines, but increased levels of anthocyanin content. Ectopic expression of PtrLAR1 in poplar positively regulated the biosynthesis of PAs, whereas the accumulation of anthocyanin and flavonol was significantly reduced (P<0.05 in all transgenic plants compared to the control plants. These results suggest that both PtrANR1 and PtrLAR1 contribute to PA biosynthesis in Populus.

  17. Genetic basis of aboveground productivity in two native Populus species and their hybrids.

    Science.gov (United States)

    Lojewski, Nathan R; Fischer, Dylan G; Bailey, Joseph K; Schweitzer, Jennifer A; Whitham, Thomas G; Hart, Stephen C

    2009-09-01

    Demonstration of genetic control over riparian tree productivity has major implications for responses of riparian systems to shifting environmental conditions and effects of genetics on ecosystems in general. We used field studies and common gardens, applying both molecular and quantitative techniques, to compare plot-level tree aboveground net primary productivity (ANPP(tree)) and individual tree growth rate constants in relation to plant genetic identity in two naturally occurring Populus tree species and their hybrids. In field comparisons of four cross types (Populus fremontii S. Wats., Populus angustifolia James, F(1) hybrids and backcross hybrids) across 11 natural stands, productivity was greatest for P. fremontii trees, followed by hybrids and lowest in P. angustifolia. A similar pattern was observed in four common gardens across a 290 m elevation and 100 km environmental gradient. Despite a doubling in productivity across the common gardens, the relative differences among the cross types remained constant. Using clonal replicates in a common garden, we found ANPP(tree) to be a heritable plant trait (i.e., broad-sense heritability), such that plant genetic factors explained between 38% and 82% of the variation in ANPP(tree). Furthermore, analysis of the genetic composition among individual tree genotypes using restriction fragment length polymorphism molecular markers showed that genetically similar trees also exhibited similar ANPP(tree). These findings indicate strong genetic contributions to natural variation in ANPP with important ecological implications. PMID:19578030

  18. Genome-Wide Identification of the Invertase Gene Family in Populus.

    Science.gov (United States)

    Chen, Zhong; Gao, Kai; Su, Xiaoxing; Rao, Pian; An, Xinmin

    2015-01-01

    Invertase plays a crucial role in carbohydrate partitioning and plant development as it catalyses the irreversible hydrolysis of sucrose into glucose and fructose. The invertase family in plants is composed of two sub-families: acid invertases, which are targeted to the cell wall and vacuole; and neutral/alkaline invertases, which function in the cytosol. In this study, 5 cell wall invertase genes (PtCWINV1-5), 3 vacuolar invertase genes (PtVINV1-3) and 16 neutral/alkaline invertase genes (PtNINV1-16) were identified in the Populus genome and found to be distributed on 14 chromosomes. A comprehensive analysis of poplar invertase genes was performed, including structures, chromosome location, phylogeny, evolutionary pattern and expression profiles. Phylogenetic analysis indicated that the two sub-families were both divided into two clades. Segmental duplication is contributed to neutral/alkaline sub-family expansion. Furthermore, the Populus invertase genes displayed differential expression in roots, stems, leaves, leaf buds and in response to salt/cold stress and pathogen infection. In addition, the analysis of enzyme activity and sugar content revealed that invertase genes play key roles in the sucrose metabolism of various tissues and organs in poplar. This work lays the foundation for future functional analysis of the invertase genes in Populus and other woody perennials. PMID:26393355

  19. Genome-Wide Identification of the Invertase Gene Family in Populus.

    Directory of Open Access Journals (Sweden)

    Zhong Chen

    Full Text Available Invertase plays a crucial role in carbohydrate partitioning and plant development as it catalyses the irreversible hydrolysis of sucrose into glucose and fructose. The invertase family in plants is composed of two sub-families: acid invertases, which are targeted to the cell wall and vacuole; and neutral/alkaline invertases, which function in the cytosol. In this study, 5 cell wall invertase genes (PtCWINV1-5, 3 vacuolar invertase genes (PtVINV1-3 and 16 neutral/alkaline invertase genes (PtNINV1-16 were identified in the Populus genome and found to be distributed on 14 chromosomes. A comprehensive analysis of poplar invertase genes was performed, including structures, chromosome location, phylogeny, evolutionary pattern and expression profiles. Phylogenetic analysis indicated that the two sub-families were both divided into two clades. Segmental duplication is contributed to neutral/alkaline sub-family expansion. Furthermore, the Populus invertase genes displayed differential expression in roots, stems, leaves, leaf buds and in response to salt/cold stress and pathogen infection. In addition, the analysis of enzyme activity and sugar content revealed that invertase genes play key roles in the sucrose metabolism of various tissues and organs in poplar. This work lays the foundation for future functional analysis of the invertase genes in Populus and other woody perennials.

  20. Palaeogene fossil Populus leaves from Lanzhou Basin and their palaeoclimatic significance

    Institute of Scientific and Technical Information of China (English)

    SUN Bainian; YAN Defei; XIE Sanping; CONG Peiyun; XIN Cunlin; YUN Fei

    2004-01-01

    An angiosperm compression flora is found in Palaeogene from Lanzhou Basin and the cuticular analysis of Populus davidiana Dode in the flora is carefully made. Furthermore, the fossil cuticles are compared with the epidermal structures of extant Populus leaves growing in different environments, I.e. Moist, semimoist, and semiarid to arid climatic regions. The present experiments indicate that mature leaves of P. Davidiana show leaf size from big to small, leaf cuticles from thick to thin and anticlinal walls of epidermal cells from faintness to clarity along with the increase of latitudes of the plant distributions, the climatic variation from moist to arid, the annual precipitation from more to less and the annual mean temperature from high to low. The fossil P.davidiana differs from the specimens collected from Shandan in semiarid to arid climatic regions but closely resembles the Wushan leaves in a semi-moist climatic area in a lot of features. In a word, the new research may reflect that the flora lives in a semi-moist climatic environment. The present discovery of compression of Paleogene Populus davidiana is of great significance to studying vegetation types, climatic and environmental changes during the primal uplifting of the Qinghai-Tibet Plateau.

  1. The establishment patterns of tree seedlings are determined immediately after wildfire in a black spruce (Picea mariana) forest

    OpenAIRE

    Tsuyuzaki, Shiro; NARITA, Kenji; Sawada, Yuki; Kushida, Keiji

    2014-01-01

    Fire severity is predicted to increase in boreal regions due to global warming. We hypothesized that these extreme events will alter regeneration patterns of black spruce (Picea mariana). To test this hypothesis, we monitored seed dispersal and seedling emergence, survival and growth for 6 years from 2005 to 2010 after the 2004 wildfire on Poker Flat, interior Alaska, using 96 1 x 1 m plots. A total of 1,300 seedlings of black spruce and three broad-leaved deciduous trees (Populus tremuloides...

  2. Common trade-offs between xylem resistance to cavitation and other physiological traits do not hold among unrelated Populus deltoides x Populus nigra hybrids.

    Science.gov (United States)

    Fichot, Régis; Barigah, Têtè S; Chamaillard, Sylvain; LE Thiec, Dider; Laurans, Françoise; Cochard, Hervé; Brignolas, Franck

    2010-09-01

    We examined the relationships between xylem resistance to cavitation and 16 structural and functional traits across eight unrelated Populus deltoides x Populus nigra genotypes grown under two contrasting water regimes. The xylem water potential inducing 50% loss of hydraulic conductance (Psi(50)) varied from -1.60 to -2.40 MPa. Drought-acclimated trees displayed a safer xylem, although the extent of the response was largely genotype dependent, with Psi(50) being decreased by as far as 0.60 MPa. At the tissue level, there was no clear relationship between xylem safety and either xylem water transport efficiency or xylem biomechanics; the only structural trait to be strongly associated with Psi(50) was the double vessel wall thickness, genotypes exhibiting a thicker double wall being more resistant. At the leaf level, increased cavitation resistance was associated with decreased stomatal conductance, while no relationship could be identified with traits associated with carbon uptake or bulk leaf carbon isotope discrimination, a surrogate of intrinsic water-use efficiency. At the whole-plant level, increased safety was associated with higher shoot growth potential under well-irrigated regime only. We conclude that common trade-offs between xylem resistance to cavitation and other physiological traits that are observed across species may not necessarily hold true at narrower scales.

  3. The cinnamyl alcohol dehydrogenase gene family in Populus: phylogeny, organization, and expression

    Directory of Open Access Journals (Sweden)

    Yellanki Priyadarshini

    2009-03-01

    Full Text Available Abstract Background Lignin is a phenolic heteropolymer in secondary cell walls that plays a major role in the development of plants and their defense against pathogens. The biosynthesis of monolignols, which represent the main component of lignin involves many enzymes. The cinnamyl alcohol dehydrogenase (CAD is a key enzyme in lignin biosynthesis as it catalyzes the final step in the synthesis of monolignols. The CAD gene family has been studied in Arabidopsis thaliana, Oryza sativa and partially in Populus. This is the first comprehensive study on the CAD gene family in woody plants including genome organization, gene structure, phylogeny across land plant lineages, and expression profiling in Populus. Results The phylogenetic analyses showed that CAD genes fall into three main classes (clades, one of which is represented by CAD sequences from gymnosperms and angiosperms. The other two clades are represented by sequences only from angiosperms. All Populus CAD genes, except PoptrCAD 4 are distributed in Class II and Class III. CAD genes associated with xylem development (PoptrCAD 4 and PoptrCAD 10 belong to Class I and Class II. Most of the CAD genes are physically distributed on duplicated blocks and are still in conserved locations on the homeologous duplicated blocks. Promoter analysis of CAD genes revealed several motifs involved in gene expression modulation under various biological and physiological processes. The CAD genes showed different expression patterns in poplar with only two genes preferentially expressed in xylem tissues during lignin biosynthesis. Conclusion The phylogeny of CAD genes suggests that the radiation of this gene family may have occurred in the early ancestry of angiosperms. Gene distribution on the chromosomes of Populus showed that both large scale and tandem duplications contributed significantly to the CAD gene family expansion. The duplication of several CAD genes seems to be associated with a genome duplication

  4. Growth & Resistance of New Hybrid Varieties of Populus euramericana "N3016" × Populus ussuriensis%杂交新品种黑青杨的生长、抗性调查研究

    Institute of Scientific and Technical Information of China (English)

    张宏伟; 王福森

    2012-01-01

    Taking F1 generation of male clones of new hybrid varieties -- Populus euramericana "N3016" × Populus ussuriensis as object, its growth & resistance were investigated. Result shows that : average tree height, DBH & volume of individual plant of 11-year-old Populus euramericana "N3016"× Populus ussuriensis are 15.05 m, 16.19 cm & 0. 142 m3 in Qiqihar region, which exceed 8.6%, 14.8% & 37.2% of control varieties of Populus simoniixP, nigra, respectively. Populus euramericana "N3016"× Populus ussuriensis have strong resistance to major diseases (grey leaf-spot, rust disease, Vaisa sordida Nits. , Botryosphaeria ribis (T ode) Grossenb. et Duggar) and the main stem-borers (Saperda populnea, Cryptorrhynchus lapathi L. , Rhynchaenus empopulifolis Chen. ). This variety whose male plants didn' t flutter, is straight & plum- ping, and is suitable for pulpwood and other industrial timbers, sheherbehs and afforestation species.%研究以杂交新品种黑青杨(Populus euramencana“N3016”×Populus ussuriensis)F1代雄性无性系为对象,对其生长、抗性进行了调查,结果表明,在齐齐哈尔地区11年生黑青杨单株平均树高、胸径和材积分别为15.05m、16.19cm和0.142m^3,分别超过对照品种小黑杨8.6%、14.8%和37.2%。对主要病害杨灰斑病、锈病、烂皮病、溃疡病及主要蛀干害虫青杨天牛、杨干象、潜叶跳象等抗性较强。该品种树干通直饱满,雄株不飞絮,适合作纸浆材等工业用材林、防护林及绿化树种。

  5. Black holes

    CERN Document Server

    Chrúsciel, P T

    2002-01-01

    This paper is concerned with several not-quantum aspects of black holes, with emphasis on theoretical and mathematical issues related to numerical modeling of black hole space-times. Part of the material has a review character, but some new results or proposals are also presented. We review the experimental evidence for existence of black holes. We propose a definition of black hole region for any theory governed by a symmetric hyperbolic system of equations. Our definition reproduces the usual one for gravity, and leads to the one associated with the Unruh metric in the case of Euler equations. We review the global conditions which have been used in the Scri-based definition of a black hole and point out the deficiencies of the Scri approach. Various results on the structure of horizons and apparent horizons are presented, and a new proof of semi-convexity of horizons based on a variational principle is given. Recent results on the classification of stationary singularity-free vacuum solutions are reviewed. ...

  6. Twenty-One Genome Sequences from Pseudomonas Species and 19 Genome Sequences from Diverse Bacteria Isolated from the Rhizosphere and Endosphere of Populus deltoides

    Energy Technology Data Exchange (ETDEWEB)

    Brown, Steven D [ORNL; Utturkar, Sagar M [ORNL; Klingeman, Dawn Marie [ORNL; Johnson, Courtney M [ORNL; Martin, Stanton [ORNL; Land, Miriam L [ORNL; Lu, Tse-Yuan [ORNL; Schadt, Christopher Warren [ORNL; Doktycz, Mitchel John [ORNL; Pelletier, Dale A [ORNL

    2012-01-01

    To aid in the investigation of the Populus deltoides microbiome we generated draft genome sequences for twenty one Pseudomonas and twenty one other diverse bacteria isolated from Populus deltoides roots. Genome sequences for isolates similar to Acidovorax, Bradyrhizobium, Brevibacillus, Burkholderia, Caulobacter, Chryseobacterium, Flavobacterium, Herbaspirillum, Novosphingobium, Pantoea, Phyllobacterium, Polaromonas, Rhizobium, Sphingobium and Variovorax were generated.

  7. Integration of Palmer Drought Severity Index and remote sensing data to simulate wetland water surface from 1910 to 2009 in Cottonwood Lake area, North Dakota

    Science.gov (United States)

    Huang, S.; Dahal, D.; Young, Caitlin; Chander, G.; Liu, S.

    2011-01-01

    Spatiotemporal variations of wetland water in the Prairie Pothole Region are controlled by many factors; two of them are temperature and precipitation that form the basis of the Palmer Drought Severity Index (PDSI). Taking the 196km2 Cottonwood Lake area in North Dakota as our pilot study site, we integrated PDSI, Landsat images, and aerial photography records to simulate monthly water surface. First, we developed a new Wetland Water Area Index (WWAI) from PDSI to predict water surface area. Second, we developed a water allocation model to simulate the spatial distribution of water bodies at a resolution of 30m. Third, we used an additional procedure to model the small wetlands (less than 0.8ha) that could not be detected by Landsat. Our results showed that i) WWAI was highly correlated with water area with an R2 of 0.90, resulting in a simple regression prediction of monthly water area to capture the intra- and inter-annual water change from 1910 to 2009; ii) the spatial distribution of water bodies modeled from our approach agreed well with the water locations visually identified from the aerial photography records; and iii) the R2 between our modeled water bodies (including both large and small wetlands) and those from aerial photography records could be up to 0.83 with a mean average error of 0.64km2 within the study area where the modeled wetland water areas ranged from about 2 to 14km2. These results indicate that our approach holds great potential to simulate major changes in wetland water surface for ecosystem service; however, our products could capture neither the short-term water change caused by intensive rainstorm events nor the wetland change caused by human activities. ?? 2011.

  8. Fischer Black

    OpenAIRE

    Robert C. Merton; Myron S. Scholes

    2013-01-01

    ReprintThis article was originally published by Wiley for the American Finance Association (Merton RC, Scholes MS. 1995. Fischer Black. J. Finance 50(5):1359–70). It is reprinted with permission from John Wiley and Sons © 1995. Reference formatting was updated to facilitate linking.

  9. Diversification and expression of the PIN, AUX/LAX and ABCB families of putative auxin transporters in Populus

    Directory of Open Access Journals (Sweden)

    Nicola eCarraro

    2012-02-01

    Full Text Available Intercellular transport of the plant hormone auxin is mediated by three families of membrane-bound protein carriers, with the PIN and ABCB families coding primarily for efflux proteins and the AUX/LAX family coding for influx proteins. In the last decade our understanding of gene and protein function for these transporters in Arabidopsis has expanded rapidly but very little is known about their role in woody plant development. Here we present a comprehensive account of all three families in the model woody species Populus, including chromosome distribution, protein structure, quantitative gene expression, and evolutionary relationships. The PIN and AUX/LAX gene families in Populus comprise 16 and 8 members respectively, and show evidence for the retention of paralogs following a relatively recent whole genome duplication. There is also evidence for differential expression across tissues within many gene pairs. The ABCB family is previously undescribed in Populus and includes 20 members, showing a much deeper evolutionary history including both tandem and whole genome duplication as well as probable loss. A striking number of these transporters are expressed in developing Populus stems and we suggest that evolutionary and structural relationships with known auxin transporters in Arabidopsis can point toward candidate genes for further study in Populus. This is especially important for the ABCBs, which is a large family and includes members in Arabidopsis that are able to transport other substrates in addition to auxin. Protein modeling, sequence alignment and expression data all point to ABCB1.1 as a likely auxin transport protein in Populus. Given that basipetal auxin flow through the cambial zone shapes the development of woody stems, it is important that we identify the full complement of proteins involved in this process. This work should lay the foundation for studies targeting specific proteins for functional characterization and in situ

  10. Stress Responsive Zinc-finger Protein Gene of Populus euphratica in Tobacco Enhances Salt Tolerance

    Institute of Scientific and Technical Information of China (English)

    2008-01-01

    The Populus euphratica stress responsive zinc-finger protein gene PSTZ, which encodes a protein including typical Cys2/His2 zinc finger structure, was isolated by reverse transcription-polymerase chain reaction from P. euphratica.Northern hybridization revealed that its expression was induced under drought and salt stress conditions. To examine its function, cDNA of the PSTZ gene, driven by the cauliflower mosaic virus 35S promoter, was cloned into a plant expression vector pBin438 and introduced into tobacco plants. Transgenic tobacco showed an enhanced salt tolerance, suggesting that PSTZ may play a role in plant responsiveness to salt stress.

  11. Populations of aspen (Populus tremuloides Michx.) with different evolutionary histories differ in their climate occupancy.

    Science.gov (United States)

    Greer, Burke T; Still, Christopher; Howe, Glenn T; Tague, Christina; Roberts, Dar A

    2016-05-01

    Quaking aspens (Populus tremuloides Michx.) are found in diverse habitats throughout North America. While the biogeography of aspens' distribution has been documented, the drivers of the phenotypic diversity of aspen are still being explored. In our study, we examined differences in climate between northern and southwestern populations of aspen, finding large-scale differences between the populations. Our results suggest that northern and southwestern populations live in distinct climates and support the inclusion of genetic and phenotypic data with species distribution modeling for predicting aspens' distribution.

  12. Diversity of insect communities with different development phases in natural Populus euphratica forests in Xinjiang

    Institute of Scientific and Technical Information of China (English)

    QIAO Hai-li; LUO You-qing; TIAN Chengming; SUN Jian-hua; FENG Xiaofeng

    2008-01-01

    An investigation method with sample plots was used to study insect communities in four different growth phases of natural Populus euphratica forests, which are juvenile, middle aged, over-mature and degraded forests, in Tarim, Xinjiang in July, 2005 and April, 2006. In our studies, 5,116 insect specimens, belonging to 12 orders, 61 families and 141 species, were collected. Lepidoptera and Coleoptera were the dominant orders. In middle-aged forests, species, individual numbers and diversity indices of insect communities were higher than those in other woodlands. The species richness and diversity indices were lowest in degraded forests because of extremely scarce vegetation.

  13. Populus spp.: supervivencia y crecimiento en clones implantados en Buenos Aires, Argentina

    OpenAIRE

    Marlats, Raúl M.; Senisterra, Gabriela; Marquina, Jorge; Ciocchini, Gabriel R.

    2009-01-01

    El objetivo de este trabajo fue evaluar la supervivencia, evolución de las alturas y áreas basales de rebrotes de clones de Populus spp. de diferentes procedencias implantados en Argiudoles típicos del borde Sur de la Pampa Ondulada, Buenos Aires, Argentina (34°55' S; 57°57' W; 15 m snm). Los clones evaluados fueron ‘Delta Gold’, ‘Stoneville 71’, ‘Catfish 2’, ‘Harvard’, ‘Onda’ e ‘I-74/51’. Se compararon, para el conjunto de clones, los comportamientos para el primero y segundo corte. Se re...

  14. Modification of water vapor diffusion in poplar wood (Populus nigra L.) by steaming at high temperatures

    OpenAIRE

    SAYAR, Maedeh; TARMIAN, Asghar

    2013-01-01

    In this investigation, the effect of steaming on the water vapor diffusion coefficient of poplar wood (Populus nigra L.) was studied. Boards with dimensions of 50 × 50 × 150 (W × H × L) mm3 and average moisture content of 12% were steamed at temperatures of 120, 140, 160, and 180 °C for 1, 2, and 3 h. The diffusion coefficients were then measured based on Fick's law of diffusion in steady-state conditions using the cup method. Results showed that the steaming of poplar wood at all mentio...

  15. black cat

    Institute of Scientific and Technical Information of China (English)

    杜铁梅

    2016-01-01

    The black cat is a masterpiece of short fiction of Poe. He successfully solved the problem of creating of the horror effect by using scene description, symbol, repetition and first-person narrative methods. And created a complete and unified mysterious terror, achieved the effect of shocking. This paper aims to discuss the mystery in-depth and to enrich the research system in Poe’s novels.

  16. Hot water and dilute acid pretreatment of high and low specific gravity Populus deltoides clones.

    Science.gov (United States)

    Martin, Elizabeth M; Bunnell, Kris A; Lau, Ching-Shuan; Pelkki, Matthew H; Patterson, David W; Clausen, Edgar C; Smith, James A; Carrier, Danielle Julie

    2011-02-01

    Populus sp. are hardwood feedstocks that grow in forest management areas that are logged for softwoods; however, they are also being considered as an energy-destined feedstock. The objective of this work was to determine the effect of xylose yield from dilute acid and hot water pretreatments performed in unstirred batch stainless steel reactors at temperatures ranging from 140 to 200°C. Populus deltoides clones S13C20 and S7C15 used in this study originated from Eastern Texas and were cultivated for 14 years in Pine Tree, AR. P. deltoides clones S13C20 and S7C15 had specific gravities of 0.48 and 0.40, respectively. Bark and wood were examined separately. As expected, hot water pretreatments, in the tested temperature range, resulted in very little direct xylose recovery. However, the 140°C dilute acid pretreatment of the lower specific gravity clone, S7C15, wood yielded the highest average xylose recovery of 56%. This condition also yielded the highest concentration of furfural, 9 mg/g sample, which can be inhibitory to the fermentation step. The highest xylose recovery from bark samples, 31%, was obtained with clone S7C15, using the 160°C dilute acid pretreatment for 60 min.

  17. Reproductive characteristics of a Populus euphratica population and prospects for its restoration in China.

    Directory of Open Access Journals (Sweden)

    Dechang Cao

    Full Text Available Populus euphratica is a dominant tree in riparian ecosystems in arid areas of northwest China, but it fails to regenerate in these systems. This study evaluates causes for the failure of sexual and asexual regeneration of this species in the wild. P. euphratica disperses as many as 85743 seeds/m(2 during summer, and the seeds germinate to 92.0% in distilled water and to 60.8% on silt. However, very few seeds (3.6% can germinate on unflooded soil. The seed-rain season is prolonged by temporal variability in seed dispersal among individuals, which ensures that seedling emergence can occur during favorable conditions (i.e., floods and rainfall. As a result of water shortage and river channeling due to water usage and altered river flows, there are no safe sites on river banks for seed germination, which has led to the failure of P. euphratica to regenerate from seed. Root suckers of P. euphratica were present in 86% of the forest gaps investigated. However, extensive grazing has destroyed many of them and thus has reduced this form of regeneration. This research suggests that human activities are resulting in the failure of P. euphratica to regenerate. Changes in land management such as reduced use of concrete canals in Populus forests and/or reduced sheep grazing in these areas may promote their regeneration.

  18. Differential detection of genetic Loci underlying stem and root lignin content in Populus.

    Directory of Open Access Journals (Sweden)

    Tongming Yin

    Full Text Available In this study, we established a comprehensive genetic map with a large number of progeny from a three-generation hybrid Populus intercross, and phenotyped the lignin content, S/G ratio and 28 cell wall subcomponents both in stems and roots for the mapping individuals. Phenotypic analysis revealed that lignin content and syringyl-to-guaiacyl (S/G ratio using pyrolysis molecular beam mass spectroscopy (pyMBMS varied among mapping individuals. Phenotypic analysis revealed that stem lignin content is significantly higher than that in root and the quantified traits can be classified into four distinct groups, with strong correlations observed among components within organs. Altogether, 179 coordinating QTLs were detected, and they were co-localized into 49 genetic loci, 27 of which appear to be pleiotropic. Many of the detected genetic loci were detected differentially in stem and root. This is the first report of separate genetic loci controlling cell wall phenotypes above and below ground. These results suggest that it may be possible to modify lignin content and composition via breed and/or engineer as a means of simultaneously improving Populus for cellulosic ethanol production and carbon sequestration.

  19. Degradation of Populus euphratica community in the lower reaches of the Tarim River, Xinjiang, China

    Institute of Scientific and Technical Information of China (English)

    LIU Jia-zhen; CHEN Ya-ning; CHEN Yong-jin; ZHANG Na; LI Wei-hong

    2005-01-01

    To investigate the relationships between the degradation of plant community and groundwater level in the lower reaches of the Tarim River, nine monitored sections were set along the main stream, where there had been no runoff for nearly 30 years. The characteristics of plant communities were analyzed. It was found that the coverage of trees gradually decreased along the groundwater depth gradient, while the coverage of shrubs slightly increased rather than decreased at first and then gradually decreased, and the coverage of herbs steadily decreased at the beginning and then quickly decreased. The species diversity and species richness of both herbs and woody plants showed obvious degrading trends, while the variations in species evenness were slight. The degrading sequences of species were related to their physiological and ecological characteristics, especially their sensitivity to changes of groundwater table. The herbs with shallow roots first degenerated or disappeared when the groundwater table fell, and then did the deep-rooted herbs, and finally the trees and shrubs with strong tolerance to drought degenerated. The Populus euphratica communities showed typical degrading characteristics, namely the dominant species Populus euphratica remained its dominant status during the degradation. Overall, the existence of strongly tolerant-drought species was the obvious indication of plant species degradation; while simplification of community structure and the decrease of species richness were the obvious indication of plant community degradation.

  20. Arbuscular mycorrhizal fungi associated with Populus-Salix stands in a semiarid riparian ecosystem

    Science.gov (United States)

    Beauchamp, Vanessa B.; Stromberg, J.C.; Stutz, J.C.

    2006-01-01

    ??? This study examined the activity, species richness, and species composition of the arbuscular mycorrhizal fungal (AMF) community of Populus-Salix stands on the Verde River (Arizona, USA), quantified patterns of AMF richness and colonization along complex floodplain gradients, and identified environmental variables responsible for structuring the AMF community. ??? Samples from 61 Populus-Salix stands were analyzed for AMF and herbaceous composition, AMF colonization, gravimetric soil moisture, soil texture, per cent organic matter, pH, and concentrations of nitrate, bicarbonate phosphorus and exchangeable potassium. ??? AMF species richness declined with stand age and distance from and elevation above the channel and was positively related to perennial species cover and richness and gravimetric soil moisture. Distance from and elevation above the active channel, forest age, annual species cover, perennial species richness, and exchangeable potassium concentration all played a role in structuring the AMF community in this riparian area. ??? Most AMF species were found across a wide range of soil conditions, but a subset of species tended to occur more often in hydric areas. This group of riparian affiliate AMF species includes several not previously encountered in the surrounding Sonoran desert. ?? New Phytologist (2006).

  1. The transcriptome of Populus in elevated CO2 reveals increased anthocyanin biosynthesis during delayed autumnal senescence

    Energy Technology Data Exchange (ETDEWEB)

    Tallis, M.J.; Rogers, A.; Lin, Y.; Zhang, J.; Street, N. R.; Miglietta, F.; Karnosky, D. F.; Angelis, P. D.; Calfapietra, C.; Taylor, G.

    2010-03-01

    The delay in autumnal senescence that has occurred in recent decades has been linked to rising temperatures. Here, we suggest that increasing atmospheric CO{sub 2} may partly account for delayed autumnal senescence and for the first time, through transcriptome analysis, identify gene expression changes associated with this delay. Using a plantation of Populus x euramericana grown in elevated [CO{sub 2}] (e[CO{sub 2}]) with free-air CO{sub 2} enrichment (FACE) technology, we investigated the molecular and biochemical basis of this response. A Populus cDNA microarray was used to identify genes representing multiple biochemical pathways influenced by e[CO{sub 2}] during senescence. Gene expression changes were confirmed through real-time quantitative PCR, and leaf biochemical assays. Pathways for secondary metabolism and glycolysis were significantly up-regulated by e[CO{sub 2}] during senescence, in particular, those related to anthocyanin biosynthesis. Expressed sequence tags (ESTs) representing the two most significantly up-regulated transcripts in e[CO{sub 2}], LDOX (leucoanthocyanidin dioxgenase) and DFR (dihydroflavonol reductase), gave (e[CO{sub 2}]/ambient CO{sub 2} (a[CO{sub 2}])) expression ratios of 39.6 and 19.3, respectively. We showed that in e[CO{sub 2}] there was increased autumnal leaf sugar accumulation and up-regulation of genes determining anthocyanin biosynthesis which, we propose, prolongs leaf longevity during natural autumnal senescence.

  2. Populus trichocarpa cell wall chemistry and ultrastructure trait variation, genetic control and genetic correlations.

    Science.gov (United States)

    Porth, Ilga; Klápště, Jaroslav; Skyba, Oleksandr; Lai, Ben S K; Geraldes, Armando; Muchero, Wellington; Tuskan, Gerald A; Douglas, Carl J; El-Kassaby, Yousry A; Mansfield, Shawn D

    2013-02-01

    The increasing ecological and economical importance of Populus species and hybrids has stimulated research into the investigation of the natural variation of the species and the estimation of the extent of genetic control over its wood quality traits for traditional forestry activities as well as the emerging bioenergy sector. A realized kinship matrix based on informative, high-density, biallelic single nucleotide polymorphism (SNP) genetic markers was constructed to estimate trait variance components, heritabilities, and genetic and phenotypic correlations. Seventeen traits related to wood chemistry and ultrastructure were examined in 334 9-yr-old Populus trichocarpa grown in a common-garden plot representing populations spanning the latitudinal range 44° to 58.6°. In these individuals, 9342 SNPs that conformed to Hardy-Weinberg expectations were employed to assess the genomic pair-wise kinship to estimate narrow-sense heritabilities and genetic correlations among traits. The range-wide phenotypic variation in all traits was substantial and several trait heritabilities were > 0.6. In total, 61 significant genetic and phenotypic correlations and a network of highly interrelated traits were identified. The high trait variation, the evidence for moderate to high heritabilities and the identification of advantageous trait combinations of industrially important characteristics should aid in providing the foundation for the enhancement of poplar tree breeding strategies for modern industrial use. PMID:23278123

  3. Comparative physiology of allopatric Populus species: geographic clines in photosynthesis, height growth, and carbon isotope discrimination in common gardens.

    Science.gov (United States)

    Soolanayakanahally, Raju Y; Guy, Robert D; Street, Nathaniel R; Robinson, Kathryn M; Silim, Salim N; Albrectsen, Benedicte R; Jansson, Stefan

    2015-01-01

    Populus species with wide geographic ranges display strong adaptation to local environments. We studied the clinal patterns in phenology and ecophysiology in allopatric Populus species adapted to similar environments on different continents under common garden settings. As a result of climatic adaptation, both Populus tremula L. and Populus balsamifera L. display latitudinal clines in photosynthetic rates (A), whereby high-latitude trees of P. tremula had higher A compared to low-latitude trees and nearly so in P. balsamifera (p = 0.06). Stomatal conductance (g s) and chlorophyll content index (CCI) follow similar latitudinal trends. However, foliar nitrogen was positively correlated with latitude in P. balsamifera and negatively correlated in P. tremula. No significant trends in carbon isotope composition of the leaf tissue (δ(13)C) were observed for both species; but, intrinsic water-use efficiency (WUEi) was negatively correlated with the latitude of origin in P. balsamifera. In spite of intrinsically higher A, high-latitude trees in both common gardens accomplished less height gain as a result of early bud set. Thus, shoot biomass was determined by height elongation duration (HED), which was well approximated by the number of days available for free growth between bud flush and bud set. We highlight the shortcoming of unreplicated outdoor common gardens for tree improvement and the crucial role of photoperiod in limiting height growth, further complicating interpretation of other secondary effects. PMID:26236324

  4. Biomass traits and candidate genes for bioenergy revealed through association genetics in coppiced European Populus nigra (L.)

    NARCIS (Netherlands)

    Allwright, Mike Robert; Payne, Adrienne; Emiliani, Giovanni; Milner, Suzanne; Viger, Maud; Rouse, Franchesca; Keurentjes, Joost J.B.; Bérard, Aurélie; Wildhagen, Henning; Faivre-Rampant, Patricia; Polle, Andrea; Morgante, Michele; Taylor, Gail

    2016-01-01

    Background: Second generation (2G) bioenergy from lignocellulosic feedstocks has the potential to develop as a sustainable source of renewable energy; however, significant hurdles still remain for large-scale commercialisation. Populus is considered as a promising 2G feedstock and understanding t

  5. Identification of candidate genes in Populus cell wall biosynthesis using text-mining, co-expression network and comparative genomics

    Energy Technology Data Exchange (ETDEWEB)

    Yang, Xiaohan [ORNL; Ye, Chuyu [ORNL; Bisaria, Anjali [ORNL; Tuskan, Gerald A [ORNL; Kalluri, Udaya C [ORNL

    2011-01-01

    Populus is an important bioenergy crop for bioethanol production. A greater understanding of cell wall biosynthesis processes is critical in reducing biomass recalcitrance, a major hindrance in efficient generation of ethanol from lignocellulosic biomass. Here, we report the identification of candidate cell wall biosynthesis genes through the development and application of a novel bioinformatics pipeline. As a first step, via text-mining of PubMed publications, we obtained 121 Arabidopsis genes that had the experimental evidences supporting their involvement in cell wall biosynthesis or remodeling. The 121 genes were then used as bait genes to query an Arabidopsis co-expression database and additional genes were identified as neighbors of the bait genes in the network, increasing the number of genes to 548. The 548 Arabidopsis genes were then used to re-query the Arabidopsis co-expression database and re-construct a network that captured additional network neighbors, expanding to a total of 694 genes. The 694 Arabidopsis genes were computationally divided into 22 clusters. Queries of the Populus genome using the Arabidopsis genes revealed 817 Populus orthologs. Functional analysis of gene ontology and tissue-specific gene expression indicated that these Arabidopsis and Populus genes are high likelihood candidates for functional genomics in relation to cell wall biosynthesis.

  6. Ultrastructural and Extracellular Protein Changes in Cell Suspension Cultures of Populus euphratica Associated with Low Temperature-induced Cold Acclimation

    Institute of Scientific and Technical Information of China (English)

    Dai Huanqin; Lu Cunfu; Zhang Hui; Zhang Xujia

    2003-01-01

    Populus euphratica Olive is the only tree species that can grow in the saline land and also survive cold winters in northwest China, and it plays a very important role in stabilizing the vulnerable ecosystem there. A cell suspension culture was initiated from callus derived from plantlets of Populus euphratica. Cold acclimation was induced (LT50 of-17.5 ℃) in cell suspension at 4-5 ℃ in the dark for 30 days and the freezing tolerance increased from LT50 of-12.5 ℃ in nonacclimated cells to LT50 of-17.5 ℃ in cold-acclimated cells. Microvacuolation, cytoplasmic augmentation and accumulation of starch granules were observed in cells that were cold-acclimated by exposure to low temperatures. Several qualitative and quantitative changes in proteins were noted during cold acclimation. Antibodies to carrot extracellular (apoplastic) 36 kD antifreeze protein did not cross react on immunoelectroblots with extracellular proteins in cell suspension culture medium of Populus euphratica, indicating no common epitopes in the carrot 36 kD antifreeze protein and P euphratica extracellular proteins. The relationship of these changes to cold acclimation in Populus euphratica cell cultures was discussed.

  7. The SHORT-ROOT-like gene PtSHR2B is involved in Populus phellogen activity.

    Science.gov (United States)

    Miguel, Andreia; Milhinhos, Ana; Novák, Ondřej; Jones, Brian; Miguel, Célia M

    2016-03-01

    SHORT-ROOT (SHR) is a GRAS transcription factor first characterized for its role in the specification of the stem cell niche and radial patterning in Arabidopsis thaliana (At) roots. Three SHR-like genes have been identified in Populus trichocarpa (Pt). PtSHR1 shares high similarity with AtSHR over the entire length of the coding sequence. The two other Populus SHR-like genes, PtSHR2A and PtSHR2B, are shorter in their 5' ends when compared with AtSHR. Unlike PtSHR1, that is expressed throughout the cambial zone of greenhouse-grown Populus trees, PtSHR2Bprom:uidA expression was detected in the phellogen. Additionally, PtSHR1 and PtSHR2B expression patterns markedly differ in the shoot apex and roots of in vitro plants. Transgenic hybrid aspen expressing PtSHR2B under the 35S constitutive promoter showed overall reduced tree growth while the proportion of bark increased relative to the wood. Reverse transcription-quantitative PCR (RT-qPCR) revealed increased transcript levels of cytokinin metabolism and response-related genes in the transgenic plants consistent with an increase of total cytokinin levels. This was confirmed by cytokinin quantification by LC-MS/MS. Our results indicate that PtSHR2B appears to function in the phellogen and therefore in the regulation of phellem and periderm formation, possibly acting through modulation of cytokinin homeostasis. Furthermore, this work points to a functional diversification of SHR after the divergence of the Populus and Arabidopsis lineages. This finding may contribute to selection and breeding strategies of cork oak in which, unlike Populus, the phellogen is active throughout the entire tree lifespan, being at the basis of a highly profitable cork industry.

  8. Radionic nonuniform black strings

    Science.gov (United States)

    Tamaki, Takashi; Kanno, Sugumi; Soda, Jiro

    2004-01-01

    Nonuniform black strings in the two-brane system are investigated using the effective action approach. It is shown that the radion acts as a nontrivial hair of the black strings. From the brane point of view, the black string appears as the deformed dilatonic black hole which becomes a dilatonic black hole in the single brane limit and reduces to the Reissner-Nordström black hole in the close limit of two-branes. The stability of solutions is demonstrated using catastrophe theory. From the bulk point of view, the black strings are proved to be nonuniform. Nevertheless, the zeroth law of black hole thermodynamics still holds.

  9. Xylem anatomy correlates with gas exchange, water-use efficiency and growth performance under contrasting water regimes: evidence from Populus deltoides x Populus nigra hybrids.

    Science.gov (United States)

    Fichot, Régis; Laurans, Françoise; Monclus, Romain; Moreau, Alain; Pilate, Gilles; Brignolas, Franck

    2009-12-01

    Six Populus deltoides Bartr. ex Marsh. x P. nigra L. genotypes were selected to investigate whether stem xylem anatomy correlated with gas exchange rates, water-use efficiency (WUE) and growth performance. Clonal copies of the genotypes were grown in a two-plot common garden test under contrasting water regimes, with one plot maintained irrigated and the other one subjected to moderate summer water deficit. The six genotypes displayed a large range of xylem anatomy, mean vessel and fibre diameter varying from about 40 to 60 microm and from 7.5 to 10.5 microm, respectively. Decreased water availability resulted in a reduced cell size and an important rise in vessel density, but the extent of xylem plasticity was both genotype and trait dependent. Vessel diameter and theoretical xylem-specific hydraulic conductivity correlated positively with stomatal conductance, carbon isotope discrimination and growth performance-related traits and negatively with intrinsic WUE, especially under water deficit conditions. Vessel diameter and vessel density measured under water deficit conditions correlated with the relative losses in biomass production in response to water deprivation; this resulted from the fact that a more plastic xylem structure was generally accompanied by a larger loss in biomass production. PMID:19825869

  10. Genome-wide identification and characterization of novel lncRNAs in Populus under nitrogen deficiency.

    Science.gov (United States)

    Chen, Min; Wang, Chenlu; Bao, Hai; Chen, Hui; Wang, Yanwei

    2016-08-01

    Long non-coding RNAs (lncRNAs) have been identified as important regulatory factors of gene expression in eukaryotic species, such as Homo sapiens, Arabidopsis thaliana, and Oryza sativa. However, the systematic identification of potential lncRNAs in trees is comparatively rare. In particular, the characteristics, expression, and regulatory roles of lncRNAs in trees under nutrient stress remain largely unknown. A genome-wide strategy was used in this investigation to identify and characterize novel and low-nitrogen (N)-responsive lncRNAs in Populus tomentosa; 388 unique lncRNA candidates belonging to 380 gene loci were detected and only seven lncRNAs were found to belong to seven conserved non-coding RNA families indicating the majority of P. tomentosa lncRNAs are species-specific. In total, 126 lncRNAs were significantly altered under low-N stress; 8 were repressed, and 118 were induced. Furthermore, 9 and 5 lncRNAs were detected as precursors of 11 known and 14 novel Populus miRNAs, respectively, whereas 4 lncRNAs were targeted by 29 miRNAs belonging to 5 families, including 22 conserved and 7 non-conserved miRNAs. In addition, 15 antisense lncRNAs were identified to be generated from opposite strands of 14 corresponding protein-coding genes. In total, 111 protein-coding genes with regions complementary to 38 lncRNAs were also predicted with some lncRNAs corresponding to multiple genes and vice versa, and their functions were annotated, which further demonstrated the complex regulatory relationship between lncRNAs and protein-coding genes in plants. Moreover, an interaction network among lncRNAs, miRNAs, and mRNAs was investigated. These findings enrich our understanding of lncRNAs in Populus, expand the methods of miRNA identification. Our results present the first global characterization of lncRNAs and their potential target genes in response to nitrogen stress in trees, which provides more information on low-nutrition adaptation mechanisms in woody plants

  11. Conservation and Diversity of MicroRNA-associated Copper-regulatory Networks in Populus trichocarpa

    Institute of Scientific and Technical Information of China (English)

    Shanfa Lu; Chenmin Yang; Vincent L. Chiang

    2011-01-01

    Plants develop important regulatory networks to adapt to the frequently-changing availability of copper (Cu).However,little is known about miRNA-associated Cu-regulatory networks in plant species other than Arabidopsis.Here,we report that Cu-responsive miRNAs in Populus trichocarpa (Torr.& Gray)include not only conserved miR397,miR398 and miR408,but also Populus-specific miR1444,suggesting the conservation and diversity of Cu-responsive miRNAs in plants.Copper-associated suppression of mature miRNAs is in company with the up-regulation of their target genes encoding Cu-containing proteins in Populus.The targets include miR397-targeted PtLAC5,PtLAC6 and PtLAC110a,miR398-targeted PtCSD1,PtCSD2a and PtCSD2b,miR408-targeted PtPCL1,PtPCL2,PtPCL3 and PtLAC4,and miR1444-targeted PtPPO3 and PtPPO6.Consistently,P.trichocarpa miR408 promoter-directed GUS gene expression is down-regulated by Cu in transgenic tobacco plants.Cu-response elements (CuREs) are found in the promoters of Cu-responsive miRNA genes.We identified 34 SQUAMOSA-promoter binding protein-like (SPL) genes,of which 17 are full-length PtSPL proteins or partial sequences with at least 300 amino acids.Phylogenetic analysis indicates that PtSPL3 and PtSPL4 are CuRE-binding proteins controlling Cu-responsive gene expression.Cu appears to be not involved in the regulation of these transcription factors because neither PtSPL3 nor PtSPL4 is Cu-regulated and no CuRE exists in their promoters.

  12. Black Urine

    Directory of Open Access Journals (Sweden)

    Rahim Vakili

    2016-06-01

    Full Text Available A 2-year-old boy was born at term of healthy, non-consanguineous Iranian parents. His mother attended in the clinic with the history of sometimes discoloration of diapers after passing urine. She noticed that first at the age of one month with intensified in recent months. His Physical examination and growth parameters were normal. His mother denied taking any medication (sorbitol, nitrofurantoin, metronidazole, methocarbamol, sena and methyldopa (5. Qualitative urine examination showed dark black discoloration. By this history, alkaptonuria was the most clinical suspicious. A 24-hour-urine sample was collected and sent for quantitative measurements. The urine sample was highly positive for homogentisic acid and negative for porphyrin metabolites.

  13. Development of polymorphic microsatellite markers based on expressed sequence tags in Populus cathayana (Salicaceae).

    Science.gov (United States)

    Tian, Z Z; Zhang, F Q; Cai, Z Y; Chen, S L

    2016-01-01

    Populus cathayana occupies a large area within the northern, central, and southwestern regions of China, and is considered to be an important reforestation species in western China. In order to investigate the population genetic structure of this species, 10 polymorphic microsatellite loci were identified based on expressed sequence tags from de novo sequencing on the Illumina HiSeq 2000 platform. All microsatellite primers were tested on 48 P. cathayana individuals from four locations on the Qinghai-Tibet Plateau. The observed heterozygosity ranged from 0.000 to 1.000, and the null-allele frequency ranged from 0.000 to 0.904. These microsatellite markers may be a useful tool in genetic studies on P. cathayana and closely related species. PMID:27525845

  14. Conversion of water consumption of a single tree and a forest stand of Populus euphratica

    Institute of Scientific and Technical Information of China (English)

    ZHANG Xiao-you; MENG Tong-tong; KANG Er-si

    2008-01-01

    Our study dear with the determination of sapwood sap flow of a single Populus euphratica tree by heat pulse technique and the calculation of water consumption of an entire forest stand, given the correlation between sap flow and sapwood area of P. euphratica. The relation between diameter at breast height (DBH) and sapwood area constitutes a powerful model; these variables are highly correlated. By means of an analysis of DBH in the sample plot, the distribution of the sapwood area of the forest land was obtained and the water consumption of this P. euphratica forest, in the lower reaches of the Heihe River, calculated as 214.9 mm by standard specific conductivity of the sample tree.

  15. Structural Characteristics and Eco-adaptability of Heteromorphic Leaves of Populus euphratica

    Institute of Scientific and Technical Information of China (English)

    Li Zhao-xia; Zheng Cai-xia

    2005-01-01

    The microstructural and ultrastructural traits of three kinds of typical leaves of Populus euphratica Olive, including lanceolate, broad-ovate and dentate broad-ovate leaves, were studied by using electron microscope and optical microscope. The results showed that with the leaves changing from lanceolate shape to dentate broad-ovate shape, their structure obviously tended to be xeromorph: developed palisade tissue, undeveloped spongy tissue, thick cutin layer and sunken stomas. The amount of mitochondria tended to be increased, and the shape of chloroplasts varied from regular spindle to irregular rotundity or oval. The leaves were covered with wax without cilium, and the stomas on the upper and lower epidermis of the leaves opened unevenly. The stomas on the lower epidermis were deeper than those on the upper epidermis under the scanning electron microscope. The results implied that the structural characteristics of the diversiform-leaves of P. euphratica are related to its eco-adaptability.

  16. Interrelationships between leaf heat conductivity and tissue structures of different varieties of Populus tomentosa Carr.

    Institute of Scientific and Technical Information of China (English)

    WANG Min; ZHANG Wen-jie; XIAO Jian; ZHANG Zhi-yi; LIU Jing

    2008-01-01

    Plant heat conductivity largely depends on tissue structure. Different structures lead to different heat conductivity. As well, water transfer also plays a very important role in heat transfer in plants. We have studied leaf heat conductivity and tissue structure of 3- and 30-year-old Populus tomentosa Carr. trees using mildred thermal imaging, steady state heat conductivity surveys and paraffin section and investigated the relationship between leaf heat conductivity, tissue structure and water content of leaves. The results show that the temperature on leaf surfaces among the various varieties of trees was almost the same. Leaf heat conductivity, temperature and water content of leaves are positively correlated. The thicker the leaf tissue structures, the larger the heat resistance. That is, the tighter the cells and the smaller the interspaces, the smaller the heat conductivity, which is not conducive for heat transfer.

  17. Population genomics of Populus trichocarpa identifies signatures of selection and adaptive trait associations

    Energy Technology Data Exchange (ETDEWEB)

    Evans, Luke M [West Virginia University, Morgantown; Slavov, Gancho [West Virginia University, Morgantown; Rodgers-Melnick, Eli [West Virginia University, Morgantown; Martin, Joel [U.S. Department of Energy, Joint Genome Institute; Ranjan, Priya [ORNL; Muchero, Wellington [ORNL; Brunner, Amy M. [Virginia Polytechnic Institute and State University; Schackwitz, Wendy [U.S. Department of Energy, Joint Genome Institute; Gunter, Lee E [ORNL; Chen, Jay [ORNL; Tuskan, Gerald A [ORNL; Difazio, Stephen P. [West Virginia University, Morgantown

    2014-01-01

    Forest trees are dominant components of terrestrial ecosystems that have global ecological and economic importance. Despite distributions that span wide environmental gradients, many tree populations are locally adapted, and mechanisms underlying this adaptation are poorly understood. Here we use a combination of whole-genome selection scans and association analyses of 544 Populus trichocarpa trees to reveal genomic bases of adaptive variation across a wide latitudinal range. Three hundred ninety-seven genomic regions showed evidence of recent positive and/or divergent selection and enrichment for associations with adaptive traits that also displayed patterns consistent with natural selection. These regions also provide unexpected insights into the evolutionary dynamics of duplicated genes and their roles in adaptive trait variation.

  18. Cloning of plasma membrane H+-ATPase gene in Populus euphratica Oliv.

    Institute of Scientific and Technical Information of China (English)

    Ning De-juan; Hou Pei-chen; Hu Zan-min; Shen Xin; Chen Shao-liang

    2006-01-01

    For this paper, the plasma membrane (PM) H+-ATPase gene has been cloned from Populus euphratica Oliv. through a homology based strategy. The isolated 3,210 bp cDNA contains a single 2,862 bp open reading frame (ORF) which encodes a putative H+-ATPase protein of 953 amino acid residues, with a significant homology to plasma membrane H+-ATPase of Prunus persica,Phaseolus vulgaris, Sesbania rostrata and Daucus carota. The predicted protein has a molecular weight of 104,553 Da. The copy number analysis revealed multiple copies of the PM H+-ATPase in the P. euphratica genome after digestion of their genomic DNA by the restriction enzymes EcoRⅠ, NdeⅠ, FbaⅠ and BglⅡ, and Southern blot.

  19. Genome-wide identification of NBS resistance genes in Populus trichocarpa.

    Science.gov (United States)

    Kohler, Annegret; Rinaldi, Cécile; Duplessis, Sébastien; Baucher, Marie; Geelen, Danny; Duchaussoy, Frédéric; Meyers, Blake C; Boerjan, Wout; Martin, Francis

    2008-04-01

    As the largest class of disease resistance R genes, the genes encoding nucleotide binding site and leucine-rich repeat proteins ("NBS-LRR genes") play a critical role in defending plants from a multitude of pathogens and pests. The diversity of NBS-LRR genes was examined in the Populus trichocarpa draft genome sequence. The NBS class of genes in this perennial tree is large and diverse, comprised of approximately 400 genes, at least twice the complement of Arabidopsis. The NBS family can be divided into multiple subfamilies with distinct domain organizations. It includes 119 Coiled-Coil-NBS-LRR genes, 64 TIR-NBS-LRR genes, 34 BED-finger-NBS-LRR, and both truncated and unusual NBS- and NBS-LRR-containing genes. The transcripts of only 34 NBS-LRR genes were detected in rust-infected and non-infected leaves using a whole-genome oligoarray. None showed an altered expression two days post inoculation. PMID:18247136

  20. Model of leaf energy distribution and its experimental validation of Populus tomentosa Carr

    Institute of Scientific and Technical Information of China (English)

    ZHANG Wen-jie; WANG Min; SHEN Ying-bai; ZHANG Zhi-yi

    2008-01-01

    Leaf temperature of a plant is the result of heat transfer between the plant and its environment. There are many factors that can affect leaf temperature, such as the solar radiation energy, environmental temperature, wind velocity, evaporation on the leaf surface, photosynthesis, respiration and so on, which have different effects on the temperature of leaves. In first instance, we analyzed the heat transfer on leaves of Populus tomentosa Cart. theoretically and constructed a model of energy distribution. We then validated the model by analyzing seven different kinds of one-year-old P. tomentosa leaves experimentally. The result shows that solar radiation is the main energy input and the dominant ways of thermal diffusion are heat transfer between the upper and lower leaf surfaces and evaporation from the leaf surface.

  1. Significance of stigma receptivity in intergeneric cross-pollination of Salix × Populus

    Directory of Open Access Journals (Sweden)

    Elżbieta Zenkteler

    2016-09-01

    Full Text Available The pollen–stigma interaction plays an important role in reproductive process and has been continuously studied in many interspecific and intergeneric crossing experiments. The aim of this study was to investigate stigma receptivity (SR of willow in order to determine the most suitable period for its pollination with poplar pollen and improve the effectiveness of Salix × Populus crosses. Tissue samples were examined histologically using light, epifluorescent, scanning, and transmission electron microscopy. Willow SR was determined by stigma morphological traits, test of pollen germination rate, Peroxtesmo test of peroxidase and esterase activity on stigma surface as well as papilla ultrastructure at anthesis. We have ascertained that the SR duration in willow is short, lasting from 1 to 2 DA. The poplar pollen germination rate on willow stigmas on 1 DA ranged from 26.3 to 11.2%.

  2. Biodegradation of naphthalene and anthracene by chemo-tactically active rhizobacteria of populus deltoides

    Directory of Open Access Journals (Sweden)

    Sandeep Bisht

    2010-12-01

    Full Text Available Several naphthalene and anthracene degrading bacteria were isolated from rhizosphere of Populus deltoides, which were growing in non-contaminated soil. Among these, four isolates, i.e. Kurthia sp., Micrococcus varians, Deinococcus radiodurans and Bacillus circulans utilized chrysene, benzene, toluene and xylene, in addition to anthracene and naphthalene. Kurthia sp and B. circulans showed positive chemotactic response for naphthalene and anthracene. The mean growth rate constant (K of isolates were found to increase with successive increase in substrate concentration (0.5 to 1.0 mg/50ml. B. circulans SBA12 and Kurthia SBA4 degraded 87.5% and 86.6% of anthracene while, Kurthia sp. SBA4, B. circulans SBA12, and M. varians SBA8 degraded 85.3 %, 95.8 % and 86.8 % of naphthalene respectively after 6 days of incubation as determined by HPLC analysis.

  3. Development of polymorphic microsatellite markers based on expressed sequence tags in Populus cathayana (Salicaceae).

    Science.gov (United States)

    Tian, Z Z; Zhang, F Q; Cai, Z Y; Chen, S L

    2016-01-01

    Populus cathayana occupies a large area within the northern, central, and southwestern regions of China, and is considered to be an important reforestation species in western China. In order to investigate the population genetic structure of this species, 10 polymorphic microsatellite loci were identified based on expressed sequence tags from de novo sequencing on the Illumina HiSeq 2000 platform. All microsatellite primers were tested on 48 P. cathayana individuals from four locations on the Qinghai-Tibet Plateau. The observed heterozygosity ranged from 0.000 to 1.000, and the null-allele frequency ranged from 0.000 to 0.904. These microsatellite markers may be a useful tool in genetic studies on P. cathayana and closely related species.

  4. The use of the white poplar (Populus alba L.) biomass as fuel

    Institute of Scientific and Technical Information of China (English)

    Tatiana Griu; Aurel Lunguleasa

    2016-01-01

    We determined the calorific value of white poplar (Populus alba L.) woody biomass to use it as fire-wood. The value of 19.133 MJ kg-1 obtained experimen-tally shows that the white poplar can be quite successfully used as firewood. Being of a lower quality in comparison with usual beech firewood, the white poplar has similar calorific value. The white poplar has a calorific density of 30.7%lower than that of current firewood. That is why the price of this firewood from white poplar is lower accord-ingly. Also, the prognosis of calorific value on the basis of the main chemical elements, being very close to the experimental value (?2.6%), indicates an appropriate value can be achieved to be used for investigation with the chemical element analysis.

  5. Determination of the relative uptake of ground vs. surface water by Populus deltoides during phytoremediation

    Science.gov (United States)

    Clinton, B.D.; Vose, J.M.; Vroblesky, D.A.; Harvey, G.J.

    2004-01-01

    The use of plants to remediate polluted groundwater is becoming an attractive alternative to more expensive traditional techniques. In order to adequately assess the effectiveness of the phytoremediation treatment, a clear understanding of water-use habits by the selected plant species is essential. We examined the relative uptake of surface water (i.e., precipitation) vs. groundwater by mature Populus deltoides by applying irrigation water at a rate equivalent to a 5-cm rain event. We used stable isotopes of hydrogen (D) and oxygen (18O) to identify groundwater and surface water (irrigation water) in the xylem sap water. Pretreatment isotopic ratios of both deuterium and 18O, ranked from heaviest to lightest, were irrigation water > groundwater > xylem sap. The discrepancy in preirrigation isotopic signatures between groundwater and xylem sap suggests that in the absence of a surface source of water (i.e., between rain events) there is an unknown amount of water being extracted from sources other than groundwater (i.e., soil surface water). We examined changes in volumetric soil water content (%), total hourly sapflux rates, and trichloroethene (TCE) concentrations. Following the irrigation treatment, volumetric soil water increased by 86% and sapflux increased by as much as 61%. Isotopic signatures of the xylem sap became substantially heavier following irrigation, suggesting that the applied irrigation water was quickly taken up by the plants. TCE concentrations in the xylem sap were diluted by an average of 21% following irrigation; however, dilution was low relative to the increase in sapflux. Our results show that water use by Populus deltoides is variable. Hence, studies addressing phytoremediation effectiveness must account for the relative proportion of surface vs. groundwater uptake.

  6. Enrichment of Root Endophytic Bacteria from Populus deltoides and Single-Cell-Genomics Analysis

    Science.gov (United States)

    Utturkar, Sagar M.; Cude, W. Nathan; Robeson, Michael S.; Yang, Zamin K.; Klingeman, Dawn M.; Land, Miriam L.; Allman, Steve L.; Lu, Tse-Yuan S.; Brown, Steven D.; Schadt, Christopher W.; Podar, Mircea; Doktycz, Mitchel J.

    2016-01-01

    ABSTRACT Bacterial endophytes that colonize Populus trees contribute to nutrient acquisition, prime immunity responses, and directly or indirectly increase both above- and below-ground biomasses. Endophytes are embedded within plant material, so physical separation and isolation are difficult tasks. Application of culture-independent methods, such as metagenome or bacterial transcriptome sequencing, has been limited due to the predominance of DNA from the plant biomass. Here, we describe a modified differential and density gradient centrifugation-based protocol for the separation of endophytic bacteria from Populus roots. This protocol achieved substantial reduction in contaminating plant DNA, allowed enrichment of endophytic bacteria away from the plant material, and enabled single-cell genomics analysis. Four single-cell genomes were selected for whole-genome amplification based on their rarity in the microbiome (potentially uncultured taxa) as well as their inferred abilities to form associations with plants. Bioinformatics analyses, including assembly, contamination removal, and completeness estimation, were performed to obtain single-amplified genomes (SAGs) of organisms from the phyla Armatimonadetes, Verrucomicrobia, and Planctomycetes, which were unrepresented in our previous cultivation efforts. Comparative genomic analysis revealed unique characteristics of each SAG that could facilitate future cultivation efforts for these bacteria. IMPORTANCE Plant roots harbor a diverse collection of microbes that live within host tissues. To gain a comprehensive understanding of microbial adaptations to this endophytic lifestyle from strains that cannot be cultivated, it is necessary to separate bacterial cells from the predominance of plant tissue. This study provides a valuable approach for the separation and isolation of endophytic bacteria from plant root tissue. Isolated live bacteria provide material for microbiome sequencing, single-cell genomics, and analyses

  7. Trade-offs between xylem hydraulic properties, wood anatomy and yield in Populus.

    Science.gov (United States)

    Hajek, Peter; Leuschner, Christoph; Hertel, Dietrich; Delzon, Sylvain; Schuldt, Bernhard

    2014-07-01

    Trees face the dilemma that achieving high plant productivity is accompanied by a risk of drought-induced hydraulic failure due to a trade-off in the trees' vascular system between hydraulic efficiency and safety. By investigating the xylem anatomy of branches and coarse roots, and measuring branch axial hydraulic conductivity and vulnerability to cavitation in 4-year-old field-grown aspen plants of five demes (Populus tremula L. and Populus tremuloides Michx.) differing in growth rate, we tested the hypotheses that (i) demes differ in wood anatomical and hydraulic properties, (ii) hydraulic efficiency and safety are related to xylem anatomical traits, and (iii) aboveground productivity and hydraulic efficiency are negatively correlated to cavitation resistance. Significant deme differences existed in seven of the nine investigated branch-related anatomical and hydraulic traits but only in one of the four coarse-root-related anatomical traits; this likely is a consequence of high intra-plant variation in root morphology and the occurrence of a few 'high-conductivity roots'. Growth rate was positively related to branch hydraulic efficiency (xylem-specific conductivity) but not to cavitation resistance; this indicates that no marked trade-off exists between cavitation resistance and growth. Both branch hydraulic safety and hydraulic efficiency significantly depended on vessel size and were related to the genetic distance between the demes, while the xylem pressure causing 88% loss of hydraulic conductivity (P88 value) was more closely related to hydraulic efficiency than the commonly used P50 value. Deme-specific variation in the pit membrane structure may explain why vessel size was not directly linked to growth rate. We conclude that branch hydraulic efficiency is an important growth-influencing trait in aspen, while the assumed trade-off between productivity and hydraulic safety is weak.

  8. Distinct Microbial Communities within the Endosphere and Rhizosphere of Populus deltoides Roots across Contrasting Soil Types.

    Energy Technology Data Exchange (ETDEWEB)

    Gottel, Neil R [ORNL; Castro Gonzalez, Hector F [ORNL; Kerley, Marilyn K [ORNL; Yang, Zamin [ORNL; Pelletier, Dale A [ORNL; Podar, Mircea [ORNL; Karpinets, Tatiana V [ORNL; Uberbacher, Edward C [ORNL; Tuskan, Gerald A [ORNL; Vilgalys, Rytas [Duke University; Doktycz, Mitchel John [ORNL; Schadt, Christopher Warren [ORNL

    2011-01-01

    The root-rhizosphere interface of Populus is the nexus of a variety of associations between bacteria, fungi, and the host plant and an ideal model for studying interactions between plants and microorganisms. However, such studies have generally been confined to greenhouse and plantation systems. Here we analyze microbial communities from the root endophytic and rhizospheric habitats of Populus deltoides in mature natural trees from both upland and bottomland sites in central Tennessee. Community profiling utilized 454 pyrosequencing with separate primers targeting the V4 region for bacterial 16S rRNA and the D1/D2 region for fungal 28S rRNA genes. Rhizosphere bacteria were dominated by Acidobacteria (31%) and Alphaproteobacteria (30%), whereas most endophytes were from the Gammaproteobacteria (54%) as well as Alphaproteobacteria (23%). A single Pseudomonas-like operational taxonomic unit (OTU) accounted for 34% of endophytic bacterial sequences. Endophytic bacterial richness was also highly variable and 10-fold lower than in rhizosphere samples originating from the same roots. Fungal rhizosphere and endophyte samples had approximately equal amounts of the Pezizomycotina (40%), while the Agaricomycotina were more abundant in the rhizosphere (34%) than endosphere (17%). Both fungal and bacterial rhizosphere samples were highly clustered compared to the more variable endophyte samples in a UniFrac principal coordinates analysis, regardless of upland or bottomland site origin. Hierarchical clustering of OTU relative abundance patterns also showed that the most abundant bacterial and fungal OTUs tended to be dominant in either the endophyte or rhizosphere samples but not both. Together, these findings demonstrate that root endophytic communities are distinct assemblages rather than opportunistic subsets of the rhizosphere.

  9. Black Silicon Solar Cells with Black Ribbons

    DEFF Research Database (Denmark)

    Davidsen, Rasmus Schmidt; Tang, Peter Torben; Mizushima, Io;

    2016-01-01

    We present the combination of mask-less reactive ion etch (RIE) texturing and blackened interconnecting ribbons as a method for obtaining all-black solar panels, while using conventional, front-contacted solar cells. Black silicon made by mask-less reactive ion etching has total, average...... in the range 15.7-16.3%. The KOH-textured reference cell had an efficiency of 17.9%. The combination of black Si and black interconnecting ribbons may result in aesthetic, all-black panels based on conventional, front-contacted silicon solar cells....... reflectance below 0.5% across a 156x156 mm2 silicon (Si) wafer. Black interconnecting ribbons were realized by oxidizing copper resulting in reflectance below 3% in the visible wavelength range. Screen-printed Si solar cells were realized on 156x156 mm2 black Si substrates with resulting efficiencies...

  10. Noncommutative black holes

    International Nuclear Information System (INIS)

    We study noncommutative black holes, by using a diffeomorphism between the Schwarzschild black hole and the Kantowski-Sachs cosmological model, which is generalized to noncommutative minisuperspace. Through the use of the Feynman-Hibbs procedure we are able to study the thermodynamics of the black hole, in particular, we calculate Hawking's temperature and entropy for the 'noncommutative' Schwarzschild black hole

  11. Black Entrepreneurship in America.

    Science.gov (United States)

    Green, Shelley; Pryde, Paul

    The economic condition of black Americans is discussed, proceeding from the assumption that black economic progress does not depend on a renewed struggle for unobtained civil rights, but rather on the creative response of black Americans to economic opportunity and problems. In the long run, black economic development must rely on the…

  12. Response of the accumulation of proline in the bodies of Populus euphratica to the change of groundwater level at the lower reaches of Tarim River

    Institute of Scientific and Technical Information of China (English)

    CHEN Yaning; CHEN Yapeng; LI Weihong; ZHANG Hongfeng

    2003-01-01

    The content of proline in the plant bodies is closely related to the converse-succession-resistant capability of the plants. In this paper, the relationship between the proline accumulation in the bodies of Populus euphratica and the change of groundwater level is analyzed by taking Populus euphratica, the main community-building species of the desert riparian forests along the Tarim River, as the research object. The research results show that the accumulation of proline in the bodies of Populus euphratica is closely related to the change of groundwater level gradient under drought stress, it increases with the drawdown of groundwater level and the increase of moisture stress degree; the accumulation of proline in the bodies of Populus euphratica has two extremely high points at the groundwater depth ranges of 3.64-5.14 m and 9.46-10.16 m. Combining the field investigation and the analysis of the plots, it is considered that the groundwater level of 3.5-4.5 m is rational for the growth of Populus euphratica. The stress groundwater depth for the normal growth and the critical one for the survival of Populus euphratica are below 4.5 m and 9-10 m respectively at the lower reaches of the Tarim River.

  13. Evaluation of the sap flow using heat pulse method to determine transpiration of the Populus euphratica canopy

    Institute of Scientific and Technical Information of China (English)

    ZHANG Xiaoyou; KANG Ersi; ZHOU Maoxian

    2007-01-01

    The sap flow of the sampled Populus euphratica stems at different radial depths and directions had been studied in Ejina Oasis,in the lower reaches of the Heihe River.Based on sap flow measurements,the transpiration of the entire canopy was calculated.Results showed a linear correlation between the sap flow and the sapwood area of the P.euphratica.Through the analysis of the diameter at breast height in the sample plot,it was found that the distribution of the diameters and the corresponding sapwood area was exponentially correlated,with the coefficient of correlation being 0.976,7.The calculated transpiration of the Populus euphratica canopy was 214.9 mm based on the specific conductivity method.

  14. Morphological and Molecular Characterization of Two Aphelenchoides Endophytic in Poplar Leaves.

    Science.gov (United States)

    Carta, Lynn K; Li, Shiguang; Skantar, Andrea M; Newcombe, George

    2016-03-01

    During a long-term, large network study of the ecology of plant endophytes in native habitats, various nematodes have been found. Two poplar species, Populus angustifolia (narrowleaf cottonwood) and Populus trichocarpa (black cottonwood), are important ecological and genomic models now used in ongoing plant-pathogen-endophyte interaction studies. In this study, two different aphelenchid nematodes within surface-sterilized healthy leaves of these two Populus spp. in northwestern North America were discovered. Nematodes were identified and characterized microscopically and molecularly with 28S ribosomal RNA (rRNA) and 18S rRNA molecular markers. From P. angustifolia, Aphelenchoides saprophilus was inferred to be closest to another population of A. saprophilus among sequenced taxa in the 18S tree. From P. trichocarpa, Laimaphelenchus heidelbergi had a 28S sequence only 1 bp different from that of a Portuguese population, and 1 bp different from the original Australian type population. The 28S and 18S rRNA trees of Aphelenchoides and Laimaphelenchus species indicated L. heidelbergi failed to cluster with three other Laimaphelenchus species, including the type species of the genus. Therefore, we support a conservative definition of the genus Laimaphelenchus, and consider these populations to belong to Aphelenchoides, amended as Aphelenchoides heidelbergi n. comb. This is the first report of these nematode species from within aboveground leaves. The presence of these fungal-feeding nematodes can affect the balance of endophytic fungi, which are important determinants of plant health. PMID:27168650

  15. RNA sequencing of Populus x canadensis roots identifies key molecular mechanisms underlying physiological adaption to excess zinc.

    Directory of Open Access Journals (Sweden)

    Andrea Ariani

    Full Text Available Populus x canadensis clone I-214 exhibits a general indicator phenotype in response to excess Zn, and a higher metal uptake in roots than in shoots with a reduced translocation to aerial parts under hydroponic conditions. This physiological adaptation seems mainly regulated by roots, although the molecular mechanisms that underlie these processes are still poorly understood. Here, differential expression analysis using RNA-sequencing technology was used to identify the molecular mechanisms involved in the response to excess Zn in root. In order to maximize specificity of detection of differentially expressed (DE genes, we consider the intersection of genes identified by three distinct statistical approaches (61 up- and 19 down-regulated and validate them by RT-qPCR, yielding an agreement of 93% between the two experimental techniques. Gene Ontology (GO terms related to oxidation-reduction processes, transport and cellular iron ion homeostasis were enriched among DE genes, highlighting the importance of metal homeostasis in adaptation to excess Zn by P. x canadensis clone I-214. We identified the up-regulation of two Populus metal transporters (ZIP2 and NRAMP1 probably involved in metal uptake, and the down-regulation of a NAS4 gene involved in metal translocation. We identified also four Fe-homeostasis transcription factors (two bHLH38 genes, FIT and BTS that were differentially expressed, probably for reducing Zn-induced Fe-deficiency. In particular, we suggest that the down-regulation of FIT transcription factor could be a mechanism to cope with Zn-induced Fe-deficiency in Populus. These results provide insight into the molecular mechanisms involved in adaption to excess Zn in Populus spp., but could also constitute a starting point for the identification and characterization of molecular markers or biotechnological targets for possible improvement of phytoremediation performances of poplar trees.

  16. Identification of additive, dominant, and epistatic variation conferred by key genes in cellulose biosynthesis pathway in Populus tomentosa

    OpenAIRE

    Du, Qingzhang; Tian, Jiaxing; Yang, Xiaohui; Pan, Wei; Xu, Baohua; Li, Bailian; Pär K Ingvarsson; Zhang, Deqiang

    2015-01-01

    Economically important traits in many species generally show polygenic, quantitative inheritance. The components of genetic variation (additive, dominant and epistatic effects) of these traits conferred by multiple genes in shared biological pathways remain to be defined. Here, we investigated 11 full-length genes in cellulose biosynthesis, on 10 growth and wood-property traits, within a population of 460 unrelated Populus tomentosa individuals, via multi-gene association. To validate positiv...

  17. The Black Black Woman and the Black Middle Class.

    Science.gov (United States)

    Jeffers, Trellie

    1981-01-01

    Reprint of a 1973 article that describes the discrimination that particularly dark-skinned Black women suffer, especially at the hands of a color-conscious Black middle class. Calls for dark women to look to the African appearance and working-class roots as sources of pride and strength. (GC)

  18. Characteristics of the stem sap flux of Populus euphratica in the lower reaches of the Heihe River Basin, Northwest China

    Institute of Scientific and Technical Information of China (English)

    2009-01-01

    Populus euphratica trees are the sole natural perennial riparian woodlands native to the river oases in the lower reaches of Heihe River Basin in northwestern China.This study investigated characteristics of the stem sap flux of Populus euphratica and its rela-tionship to environmental factors using the thermal dissipation probe(TDP) method.The results showed that(1) daily variation of sap flow of P.euphratica on clear days exhibited an obvious unimodal curve;sap flow rates in June,July,August,and September were 13.39,12.07,12.69,and 5.10 L/d,respectively;(2) the average transpiration of the Populus euphratica from June through September amounted to 1,309.84 L;(3) stem sap flow can be affected by a number of environmental factors that,in terms of the influential degree,can be arranged in the descending order of air temperature,soil moisture,relative humidity,total solar radiation,soil temperature,and wind velocity.

  19. Suppression of PtrDUF579-3 expression causes structural changes of the glucuronoxylan in Populus

    Directory of Open Access Journals (Sweden)

    Dongliang eSong

    2016-04-01

    Full Text Available DUF579 (domain unknown function 579 genes have been reported to play diverse roles in cell wall biosynthesis, such as in glucuronoxylan (GX synthesis. As GX is a major type of hemicelluloses in hard wood species, how DUF579 genes function in wood formation remains to be demonstrated in planta. This study reports a Populus DUF579 gene, PtrDUF579-3, which is characterized for its function in wood cell wall formation. PtrDUF579-3 is localized in Golgi apparatus and catalyzes methylation of the glucuronic acid (GlcA in GX biosynthesis. Suppression of PtrDUF579-3 expression in Populus caused a reduction in both the GlcA side chain number and GlcA side chain methylation on the GX backbone. The modified GX polymer through PtrDUF579-3 suppression was more susceptible to acid treatment and the PtrDUF579-3 suppressed plants displayed enhanced cellulose digestibility. These results suggest that PtrDUF579-3 is involved in GX biosynthesis and GX structure can be modified through PtrDUF579-3 suppression in Populus.

  20. Suppression of PtrDUF579-3 Expression Causes Structural Changes of the Glucuronoxylan in Populus.

    Science.gov (United States)

    Song, Dongliang; Gui, Jinshan; Liu, Chenchen; Sun, Jiayan; Li, Laigeng

    2016-01-01

    DUF579 (domain unknown function 579) genes have been reported to play diverse roles in cell wall biosynthesis, such as in glucuronoxylan (GX) synthesis. As GX is a major type of hemicelluloses in hard wood species, how DUF579 genes function in wood formation remains to be demonstrated in planta. This study reports a Populus DUF579 gene, PtrDUF579-3, which is characterized for its function in wood cell wall formation. PtrDUF579-3 is localized in Golgi apparatus and catalyzes methylation of the glucuronic acid (GlcA) in GX biosynthesis. Suppression of PtrDUF579-3 expression in Populus caused a reduction in both the GlcA side chain number and GlcA side chain methylation on the GX backbone. The modified GX polymer through PtrDUF579-3 suppression was more susceptible to acid treatment and the PtrDUF579-3 suppressed plants displayed enhanced cellulose digestibility. These results suggest that PtrDUF579-3 is involved in GX biosynthesis and GX structure can be modified through PtrDUF579-3 suppression in Populus. PMID:27148318

  1. Comparative physiology of allopatric Populus species: Geographic clines in photosynthesis, height growth and carbon isotope discrimination in common gardens

    Directory of Open Access Journals (Sweden)

    Raju Yaranna Soolanayakanahally

    2015-07-01

    Full Text Available Populus species with wide geographic ranges display strong adaptation to local environments. We studied the clinal patterns in phenology and ecophysiology in allopatric Populus species adapted to similar environments on different continents under common garden settings. As a result of climatic adaptation, both P. tremula L. and Populus balsamifera L. display latitudinal clines in photosynthetic rates (A, whereby high-latitude trees of P. tremula had higher A compared to low-latitude trees and nearly so in P. balsamifera (p = 0.06. Stomatal conductance (gs and chlorophyll content index (CCI follow similar latitudinal trends. However, foliar nitrogen was positively correlated with latitude in P. balsamifera and negatively correlated in P. tremula. No significant trends in carbon isotope composition of the leaf tissue (δ13C were observed for both species; but, intrinsic water-use efficiency (WUEi was negatively correlated with the latitude of origin in P. balsamifera. In spite of intrinsically higher A, high-latitude trees in both common gardens accomplished less height gain as a result of early bud set. Thus, shoot biomass was determined by height elongation duration (HED, which was well approximated by the number of days available for free growth between bud flush and bud set. In doing so, we highlight the shortcoming of unreplicated outdoor common gardens for tree improvement and the crucial role of photoperiod in limiting height growth, further complicating interpretation of other secondary effects.

  2. Thidiazuron: A potent cytokinin for efficient plant regeneration in Himalayan poplar (Populus ciliata Wall. using leaf explants

    Directory of Open Access Journals (Sweden)

    Gaurav Aggarwal

    2012-11-01

    Full Text Available Populus species are important resource for certain branches of industry and have special roles for scientific study on biological and agricultural systems. The present investigation was undertaken with an objective of enhancing the frequency of plant regeneration in Himalayan poplar (Populus ciliata Wall.. The effect of Thiadizuron (TDZ alone and in combination with adenine and α-Naphthalene acetic acid (NAA were studied on the regeneration potential of leaf explants. A high efficiency of shoot regeneration was observed in leaf (80.00% explants on MS basal medium supplemented with 0.024 mg/l TDZ and 79.7 mg/l adenine. Elongation and multiplication of shoots were obtained on Murashige and Skoog (MS basal medium, containing 0.5 mg/l 6. Benzyl aminopurine (BAP + 0.2mg/l Indole 3-acetic acid (IAA + 0.3 mg/l Gibberellic acid (GA3. High frequency root regeneration from in vitro developed shoots was observed on MS basal medium supplemented with 0.10 mg/l Indole 3-butyric acid(IBA. Maximum of the in vitro rooted plantlets were well accomplished to the mixture of sand: soil (1:1 and exhibited similar morphology with the field plants. A high efficiency plant regeneration protocol has been developedfrom leaf explants in Himalayan poplar (Populus ciliata Wall..

  3. Field Supervisory Test of DREB-Transgenic Populus: Salt Tolerance, Long-Term Gene Stability and Horizontal Gene Transfer

    Directory of Open Access Journals (Sweden)

    Nan Lu

    2014-05-01

    Full Text Available Improving saline resistance may be useful for reducing environmental susceptibility and improving yields in poplar plantations. However, the instability of genetically engineered traits and gene transfer reduce their usefulness and commercial value. To investigate whether the foreign gene is still present in the genome of receptor plants after seven years (i.e., long-term foreign gene stability and gene transfer, we randomly analyzed ten field-grown transgenic hybrid Populus ((Populus tomentosa × Populus bolleana × P. tomentosa carrying the DREB1 gene from Atriplex hortensis. The results of PCR and tissue culture experiments showed that AhDREB1 was present in the transgenic trees and was still expressed. However, the transcriptional expression level had decreased compared with that four years earlier. The PCR results also indicated no foreign gene in the genomic DNA of microorganisms in the soil near the transgenic poplars, indicating that no significant gene transfer had occurred from the transgenic poplars to the microorganisms at seven years after planting.

  4. Efficient Agrobacterium-mediated transformation of commercial hybrid poplar Populus nigra L. x P. maximowiczii A. Henry.

    Science.gov (United States)

    Yevtushenko, Dmytro P; Misra, Santosh

    2010-03-01

    Many economically important species of Populus, especially those in sections Aigeiros and Tacamahaca, remain recalcitrant to genetic transformation. In this study, a simple and reliable protocol was developed for the efficient Agrobacterium-mediated transformation of a difficult-to-transform, but commercially viable, hybrid poplar Populus nigra L. x P. maximowiczii A. Henry (NM6). A plant transformation vector designed to express the beta-glucuronidase (GUS) gene was used to detect transformation events at early stages of plant regeneration and to optimize parameters affecting poplar transformation. The use of zeatin riboside in shoot-induction medium, regeneration of shoots via indirect organogenesis, and early selection pressure were the major modifications that drastically improved the efficiency of poplar transformation and minimized the number of untransformed regenerants. Transgenic shoots were routinely obtained 4-10 weeks after co-culture with A. tumefaciens, with a greater than 90% rate of plant recovery. Stable transgene integration, ranging from a single insertion to ten copies per genome, was confirmed by Southern blot analysis. The mean transformation frequency was 36.3% and about two-thirds of the lines had 1-2 transgene copies. Among the explants, petioles and leaves had a higher transformation frequency than did stem segments. Growth characteristics and the morphology of transgenic poplar plants were identical to untransformed controls. These findings will accelerate the development of P. nigra x P. maximowiczii plants with novel traits, and may also be useful to improve transformation procedures for other Populus species.

  5. 欧美杨PdPP2 C基因的克隆与功能分析%Cloning and function analysis of PdPP2 C from Populus deltoides

    Institute of Scientific and Technical Information of China (English)

    郭鹏; 张士刚; 邢鑫; 姜健

    2015-01-01

    The cottonwood poplar, Populus deltoids, is one of the intensively cultivated species and most suitable for short-term logging in the mid-latituderegion. However, salinity, drought and low temperature seriously affected the growth and yield of this species. In this study, we isolated a PP2C clone from P. deltoids by RT-PCR, and analyzed its sequences. The open reading frame of PdPP2C is 1320 bp, coding 439 amino acids. Sequence analysis of protein indicated that the N end of PP2C protein was not highly conservative, but there was conservative protein phosphatase area in the C end. Realtime-PCR analysis revealed that this gene had been expressed in root, mature leaves, top leaves and stem, with the highest expression in the root. Adversity stress analysis showed that this gene can be expressed by inducing with NaCl, ABA and drought. Additionally, compared with the wild type, the growth of transgenic PdPP2C Arabiopsis was less inhibited by salt and drought stresses, the chlorophyll content increased, and the malondialdehyde content decreased. The above results indicate that PdPP2C as a protein phosphatase increased the resistance of Arabidopsis to various stresses.%欧美杨是中纬度地区最适合的短轮伐期工业用材集约经营树种之一,然而盐渍、干旱和低温严重影响了欧美杨的生长发育和产量。本文利用RT-PCR等技术克隆出欧美杨PP2C基因并进行了序列分析。 PdPP2C基因开放阅读框为1320 bp,编码439个氨基酸。蛋白质序列分析表明,PP2C蛋白N端保守性不强,C端有保守的蛋白磷酸酶区域。荧光定量PCR分析表明,该基因在欧美杨根、成熟叶、顶端叶和茎中都有表达且根中表达量最高。逆境胁迫分析表明,该基因受NaCl、ABA和干旱等诱导表达。干旱和盐胁迫处理下转PdPP2C基因拟南芥与野生型相比生长受到较少抑制,且叶绿素含量上升,丙二醛含量下降,表明PdPP2C基因作为一种蛋白磷酸酶提高了拟南芥的抗逆性。

  6. Genotypic Variation in Nutrient Selectivity in Populus under NaCl Stress

    Institute of Scientific and Technical Information of China (English)

    Chen Shaoliang; Bai Genben; Liu Xiangfen; Li Jinke; Wang Shasheng; Andrea Polle; Aloys Huttermann

    2003-01-01

    We used a salt-resistant poplar genotype Populus euphratica and two salt-sensitive genotypes, Populus ‘popularis35-44' (P. popularis) and the hybrid P. talassica Kom × (P. euphratica + Salix alba L.) to examine genotypic differences in nutrientselectivity under NaCl stress. One-year-old seedlings ofP. euphratica and one-year-old hardwood cuttings ofP. popularis were usedin a short-term study (24 hours), while in a long-term study, up to 4 weeks, two-year-old seedlings ofP. euphratica and the hybrid P.talassica Kom × (P. euphratica + Salix alba L.) were compared. In the short-term study, K+ concentration in the xylem sap ([K+]xylem)of P. euphratica significantly increased after salt stress was initiated, and maintained 1-2 fold higher than control levels during theperiod of salt stress (24 hours). Xylem Ca2+ and Mg2+ concentrations ([Ca2+]xylem, [Mg2+]xylem) in P. euphratica resembled the patternof K+ despite a lesser magnitude in elevation. However, [K+]xylem, [Ca2+]xylem and [Mg2+]xylem in P. popularis exhibited a transient in-crease at the beginning of salt treatment, thereafter, they all returned to control levels at 4 hours and no further rise was observed inthe following hours. Xylem Na+/K+, Na+/Ca2+ and Na+/Mg2+ in P. popularis increased sharply upon NaCl stress and steadily reachedthe maximum at 24 hours. In contrast, xylem Na+/K+, Na+/Ca2+ and Na+/Mg2+ in NaCl-treated plants of P. euphratica did not signifi-cantly increase during the period of salt stress (24 hours). Noteworthy, Na+/K+ markedly declined after the onset of stress. These re-sults suggest that P. euphratica had a higher nutrient selectivity in face of salinity. A same trend was observed in a 4-week study.Xylem Na+/K+, Na+/Ca2+ and Na+/Mg2+ in salinised plants of the hybrid abruptly increased after 4 days of stress, and then continu-ously increased to reach the highest level at day 8 or day 15. In comparison, the magnitude of Na+/K+, Na+/Ca2+ and Na+/Mg2+ eleva-tion in the xylem of P

  7. [Physiological-ecological effects of Populus davidiana--Quercus liaotungensis mixed forest in Ziwuling forest area].

    Science.gov (United States)

    Qin, Juan; Shangguan, Zhouping

    2006-06-01

    This paper studied the soil physical- properties under Populus davidiana, Quercus liaotungensis, and Populus davidiana--Quercus liaotungensis mixed forest in the Ziwuling forest area of Loess Plateau, and the leaf photosysthetic characteristics of these three types of forests. The results showed that soil moisture content in 0 - 300 cm layer was the highest under P. davidiana forest, and obviously increased below 200 cm in depth under P. davidiana--Q. liaotungensis mixed forest, which was 10.5% - 19.76% higher than that under Q. liaotungensis forest. In 0 - 60 cm layer, P. davidiana forest showed the highest soil bulk density and the lowest soil porosity, while P. davidiana--Q. liaotungensis mixed forest presented the lowest soil bulk density and the highest soil porosity, and both of these indices surpassed their corresponding values under pure forests, which indicated that the mixed forest could make effective use of water in deep soil, and obviously improved soil physical and chemical properties. P. davidiana and Q. liaotungensis had a higher content of leaf chlorophyll than P. davidiana--Q. liaotungensis mixed forest, and Q. liaotungensis presented the highest leaf chlorophyll content. Q. liaotungensis had the highest photosynthetic rate and stomatal conductance, followed by P. davidiana, and by P. davidiana--Q. liaotungensis mixed forest. The water use efficiency of the forests ranked in the decreasing order of Q. liaotungensis in pure forest, Q. liaotungensis in mixed forest, P. davidiana in mixed forest, and P. davidiana in pure forest. Q. liaotungensis in mixed forest presented the highest F(v)/F(m) and F(v)/F(o), and did not remarkably differ from those in pure forest, but in the mixed forest, the F(v)/F(m) and F(v)/F(o) of P. davidiana were markedly lower than those of P. davidiana in pure forest. Both the q(p) and NPQ of P. davidiana and Q. liaotungensis in pure forests were higher than those in mixed forest, respectively. In Ziwuling forest area, Q

  8. Shifting dominance of riparian Populus and Tamarix along gradients of flow alteration in western North American rivers.

    Science.gov (United States)

    Merritt, David M; Poff, N LeRoy

    2010-01-01

    Tamarix ramosissima is a naturalized, nonnative plant species which has become widespread along riparian corridors throughout the western United States. We test the hypothesis that the distribution and success of Tamarix result from human modification of river-flow regimes. We conducted a natural experiment in eight ecoregions in arid and semiarid portions of the western United States, measuring Tamarix and native Populus recruitment and abundance at 64 sites along 13 perennial rivers spanning a range of altered flow regimes. We quantified biologically relevant attributes of flow alteration as an integrated measure (the index of flow modification, IFM), which was then used to explain between-site variation in abundance and recruitment of native and nonnative riparian plant species. We found the likelihood of successful recruitment of Tamarix to be highest along unregulated river reaches and to remain high across a gradient of regulated flows. Recruitment probability for Populus, in contrast, was highest under free-flowing conditions and declined abruptly under even slight flow modification (IFM > 0.1). Adult Tamarix was most abundant at intermediate levels of IFM. Populus abundance declined sharply with modest flow regulation (IFM > 0.2) and was not present at the most flow-regulated sites. Dominance of Tamarix was highest along rivers with the most altered flow regimes. At the 16 least regulated sites, Tamarix and Populus were equally abundant. Given observed patterns of Tamarix recruitment and abundance, we infer that Tamarix would likely have naturalized, spread, and established widely in riparian communities in the absence of dam construction, diversions, and flow regulation in western North America. However, Tamarix dominance over native species would likely be less extensive in the absence of human alteration of river-flow regimes. Restoration that combines active mechanical removal of established stands of Tamarix with a program of flow releases conducive to

  9. A genomics investigation of partitioning into and among flavonoid-derived condensed tannins for carbon sequestration in Populus

    Energy Technology Data Exchange (ETDEWEB)

    Harding, Scott, A; Tsai, Chung-jui; Lindroth, Richard, L

    2013-03-24

    The project set out to use comparative (genotype and treatment) and transgenic approaches to investigate the determinants of condensed tannin (CT) accrual and chemical variability in Populus. CT type and amount are thought to effect the decomposition of plant detritus in the soil, and thereby the sequestering of carbon in the soil. The stated objectives were: 1. Genome-wide transcriptome profiling (microarrays) to analyze structural gene, transcription factor and metabolite control of CT partitioning; 2. Transcriptomic (microarray) and chemical analysis of ontogenetic effects on CT and PG partitioning; and 3. Transgenic manipulation of flavonoid biosynthetic pathway genes to modify the control of CT composition. Objective 1: A number of approaches for perturbing CT content and chemistry were tested in Objective 1, and those included nitrogen deficit, leaf wounding, drought, and salicylic acid spraying. Drought had little effect on CTs in the genotypes we used. Plants exhibited unpredictability in their response to salicylic acid spraying, leading us to abandon its use. Reduced plant nitrogen status and leaf wounding caused reproducible and magnitudinally striking increases in leaf CT content. Microarray submissions to NCBI from those experiments are the following: GSE ID 14515: Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979. Public on Jan 04, 2010; Contributor(s) Harding SA, Tsai C GSE ID 14893: Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200. Public on Feb 19, 2009; Contributor(s) Harding SA, Tsai C GSE ID 16783 Wound-induced gene expression changes in Populus: 1 week; clone RM5. Status Public on Dec 01, 2009; Contributor(s) Harding SA, Tsai C GSE ID 16785 Wound-induced gene expression changes in Populus: 90 hours; clone RM5 Status Public on Dec 01, 2009; Contributor(s) Harding SA, Tsai C Although CT amount changed in response to treatments, CT composition was essentially

  10. The Black Studies Boondoggle

    Science.gov (United States)

    Long, Richard A.

    1970-01-01

    Indicates tendencies dangerous to the basic purpose of Black Studies, and identifies four external challeges--imperialism, paternalism, nihilism, and materialism. An internal challenge is considered to be the use of European and Establishment constructs to analyze black reality. (DM)

  11. Dynamics of black holes

    OpenAIRE

    Hayward, Sean A.

    2008-01-01

    This is a review of current theory of black-hole dynamics, concentrating on the framework in terms of trapping horizons. Summaries are given of the history, the classical theory of black holes, the defining ideas of dynamical black holes, the basic laws, conservation laws for energy and angular momentum, other physical quantities and the limit of local equilibrium. Some new material concerns how processes such as black-hole evaporation and coalescence might be described by a single trapping h...

  12. Noncommutative black holes

    Energy Technology Data Exchange (ETDEWEB)

    Lopez-DomInguez, J C [Instituto de Fisica de la Universidad de Guanajuato PO Box E-143, 37150 Leoen Gto. (Mexico); Obregon, O [Instituto de Fisica de la Universidad de Guanajuato PO Box E-143, 37150 Leoen Gto. (Mexico); RamIrez, C [Facultad de Ciencias FIsico Matematicas, Universidad Autonoma de Puebla, PO Box 1364, 72000 Puebla (Mexico); Sabido, M [Instituto de Fisica de la Universidad de Guanajuato PO Box E-143, 37150 Leoen Gto. (Mexico)

    2007-11-15

    We study noncommutative black holes, by using a diffeomorphism between the Schwarzschild black hole and the Kantowski-Sachs cosmological model, which is generalized to noncommutative minisuperspace. Through the use of the Feynman-Hibbs procedure we are able to study the thermodynamics of the black hole, in particular, we calculate Hawking's temperature and entropy for the 'noncommutative' Schwarzschild black hole.

  13. Black holes without firewalls

    Science.gov (United States)

    Larjo, Klaus; Lowe, David A.; Thorlacius, Larus

    2013-05-01

    The postulates of black hole complementarity do not imply a firewall for infalling observers at a black hole horizon. The dynamics of the stretched horizon, that scrambles and reemits information, determines whether infalling observers experience anything out of the ordinary when entering a large black hole. In particular, there is no firewall if the stretched horizon degrees of freedom retain information for a time of the order of the black hole scrambling time.

  14. Duplication of Locus Coding of Malate Dehydrogenase in Populus tomentosa Carr.

    Institute of Scientific and Technical Information of China (English)

    2005-01-01

    Horizontal starch-gel electrophoresis was used to study crude enzyme extraction from young leaves of 234 clones of Populus tomentosa Carr. selected from nine provenances in North China. Ten enzyme systems were resolved. One hundred and fifty-six clones showing unusual allozyme band patterns at locus Mdh-1 were found. Three allozyme bands at locus Mdh-1 were 9:6:1 in concentration. Further studies on the electrophoretic patterns of ground mixed pollen extraction of 30 male clones selected at random from the 156 clones were conducted and it was found that allozyme bands at locus Mdh-1 were composed of two dark-stained bands and a weak band. Only one group of the malate dehydrogenase (MDH) zymogram composed of two bands was obtained from the electrophoretic segregation of pollen leachate of the same clones. A comparison of the electrophoretic patterns one another suggested that the locus Mdh-1 coding malate dehydrogenase in diploid species of P. tomentosa was duplicated. The duplicate gene locus possessed three same alleles and was located in mitochondria. The locus duplication of alleles coding malate dehydrogenase in P. tomentosa was discovered and reported for the first time.

  15. Assortment structure in poplar plantation Populus x euramerjcana I-214 based on European standard

    Directory of Open Access Journals (Sweden)

    Danilović Milorad

    2005-01-01

    Full Text Available Assortment structure in poplar plantation Populus x euramericana I-214 was obtained by European standard for round wood. Based on the data of theoretical cutting, the correlation between total volume of assortments and tree diameter at breast height was established. Model of the function representing the relation between total volume of assortments of superior quality and tree diameter is reciprocal. The relation between total volumes of normal-quality assortments can be represented by a logarithm model of the function, and the relation between total volume of assortments which cannot be classified into any quality class and tree diameter is best represented by a degree model. Knots up to the height of 6 m had a significant effect on the percentage of classes of superior quality. If the lower branches were pruned from standing trees up to the height of 6 m, the percentage of this class would increase averagely by 22.07%. This shows that pruning of lower branches is a very significant plantation tending measure and that it should be performed in time. Sweep also caused the decrease of percentage of superior assortments, but not to the expected degree, because the plantation is situated along the river Sava.

  16. Identification and characterization of CBF/DREB1-related genes in Populus hopeiensis

    Institute of Scientific and Technical Information of China (English)

    WANG Ze-liang; AN Xin-min; LI Bo; REN Yuan-yuan; JIANG Xi-bing; BO Wen-hao; ZHANG Zhi-yi

    2008-01-01

    The dehydration-responsive element-binding factor (DREB) is a plant-specific family of transcription factors and plays an important role in plant response and adaptation to abiotic stress. In the present work, two highly similar CBF/DREBl-like genes, designated as PhCBF4a and PhCBF4b, were identified from Populus hopeiensis. These two genes contain all conserved domains known to exist in other CBF/DREBI genes. In the AP2 domain, there is only one different amino acid residue between PhCBF4a and PhCBF4b, alanine or valine, a nonpolar amino acid, suggesting that PhCBF4a and PhCBF4b may have similar DNA binding ability. Their expression is induced by water-loss treatment and their expression patterns axe similar. Moreover, with a genomic DNA as template, the presence of the same bands in PCR products as those in expression pattern analysis indicated that PhCBF4a and PhCBF4b exist in the genome of P. hopeiensis. Their detailed functions are discussed and will need further study.

  17. Construction of a bidirectional promoter and its transient expression in Populus tomentosa

    Institute of Scientific and Technical Information of China (English)

    Chunxiao ZHANG; Ying GAI; Yanyan ZHU; Xuemei CHEN; Xiangning JIANG

    2008-01-01

    Simultaneous introduction of multiple genes into plants is a critical step in plant genetic engineering to manipulate multiple functional genes in metabolic engineering and trait stacking. It is important to construct a bidirectional promoter for transforming two or more genes into plants simultaneously. The widely used unidirectional CaMV35S promoter has been mod-ified to a bidirectional promoter in this work by fusing a CaMV35S minimal promoter (Pmini) at its end in opposite orientation to the original promoter. To test its bi-directional transcriptional activities, two widely used histochemically visible reporter genes, gusA (β-glucuronidase) from Escherichia coli and gfp (Green Fluorescent Protein) from Aequorea victoria, were fused to the terminus of the bidirectional promoter in different orientations ending with NOS terminator sequences. The transient expression of the gusA and gfp genes were detected by histochemical staining for GUS and by fluorescence microscopy for GFP. The direction of transient expression of GUS and GFP in Agro-bacterium mediated 3-4 days transformed leaf discs of Populus tomentosa, indicating that the promoter did have bidirectional transcriptional activities simultaneously in cells and tissues. It was discussed that this bidirectional promoter could possibly be applied in woody plant engineering.

  18. Phenology and climate relationships in aspen (Populus tremuloides Michx.) forest and woodland communities of southwestern Colorado

    Science.gov (United States)

    Meier, Gretchen A.; Brown, Jesslyn F.; Evelsizer, Ross J.; Vogelmann, James E.

    2014-01-01

    Trembling aspen (Populus tremuloides Michx.) occurs over wide geographical, latitudinal, elevational, and environmental gradients, making it a favorable candidate for a study of phenology and climate relationships. Aspen forests and woodlands provide numerous ecosystem services, such as high primary productivity and biodiversity, retention and storage of environmental variables (precipitation, temperature, snow–water equivalent) that affect the spring and fall phenology of the aspen woodland communities of southwestern Colorado. We assessed the land surface phenology of aspen woodlands using two phenology indices, start of season time (SOST) and end of season time (EOST), from the U.S. Geological Survey (USGS) database of conterminous U.S. phenological indicators over an 11-year time period (2001–2011). These indicators were developed with 250 m resolution remotely sensed data from the Moderate Resolution Imaging Spectroradiometer processed to highlight vegetation response. We compiled data on SOST, EOST, elevation, precipitation, air temperature, and snow water equivalent (SWE) for selected sites having more than 80% cover by aspen woodland communities. In the 11-year time frame of our study, EOST had significant positive correlation with minimum fall temperature and significant negative correlation with fall precipitation. SOST had a significant positive correlation with spring SWE and spring maximum temperature.

  19. Genetic variation in functional traits influences arthropod community composition in aspen (Populus tremula L.).

    Science.gov (United States)

    Robinson, Kathryn M; Ingvarsson, Pär K; Jansson, Stefan; Albrectsen, Benedicte R

    2012-01-01

    We conducted a study of natural variation in functional leaf traits and herbivory in 116 clones of European aspen, Populus tremula L., the Swedish Aspen (SwAsp) collection, originating from ten degrees of latitude across Sweden and grown in a common garden. In surveys of phytophagous arthropods over two years, we found the aspen canopy supports nearly 100 morphospecies. We identified significant broad-sense heritability of plant functional traits, basic plant defence chemistry, and arthropod community traits. The majority of arthropods were specialists, those coevolved with P. tremula to tolerate and even utilize leaf defence compounds. Arthropod abundance and richness were more closely related to plant growth rates than general chemical defences and relationships were identified between the arthropod community and stem growth, leaf and petiole morphology, anthocyanins, and condensed tannins. Heritable genetic variation in plant traits in young aspen was found to structure arthropod community; however no single trait drives the preferences of arthropod folivores among young aspen genotypes. The influence of natural variation in plant traits on the arthropod community indicates the importance of maintaining genetic variation in wild trees as keystone species for biodiversity. It further suggests that aspen can be a resource for the study of mechanisms of natural resistance to herbivores.

  20. Genetic variation in functional traits influences arthropod community composition in aspen (Populus tremula L..

    Directory of Open Access Journals (Sweden)

    Kathryn M Robinson

    Full Text Available We conducted a study of natural variation in functional leaf traits and herbivory in 116 clones of European aspen, Populus tremula L., the Swedish Aspen (SwAsp collection, originating from ten degrees of latitude across Sweden and grown in a common garden. In surveys of phytophagous arthropods over two years, we found the aspen canopy supports nearly 100 morphospecies. We identified significant broad-sense heritability of plant functional traits, basic plant defence chemistry, and arthropod community traits. The majority of arthropods were specialists, those coevolved with P. tremula to tolerate and even utilize leaf defence compounds. Arthropod abundance and richness were more closely related to plant growth rates than general chemical defences and relationships were identified between the arthropod community and stem growth, leaf and petiole morphology, anthocyanins, and condensed tannins. Heritable genetic variation in plant traits in young aspen was found to structure arthropod community; however no single trait drives the preferences of arthropod folivores among young aspen genotypes. The influence of natural variation in plant traits on the arthropod community indicates the importance of maintaining genetic variation in wild trees as keystone species for biodiversity. It further suggests that aspen can be a resource for the study of mechanisms of natural resistance to herbivores.

  1. Pharmacological potential of Populus nigra extract as antioxidant, anti-inflammatory, cardiovascular and hepatoprotective agent

    Institute of Scientific and Technical Information of China (English)

    Nadjet Debbache-Benaida; Dina Atmani-Kilani; Valrie Barbara Schini-Keirth; Nouredine Djebbli; Djebbar Atmani

    2013-01-01

    Objective: To evaluate antioxidant, anti-inflammatory, hepatoprotective and vasorelaxant activities of Populus nigra flower buds ethanolic extract. Methods: Antioxidant and anti-inflammatory activities of the extract were assessed using respectively the ABTS test and the animal model of carrageenan-induced paw edema. Protection from hepatic toxicity caused by aluminum was examined by histopathologic analysis of liver sections. Vasorelaxant effect was estimated in endothelium-intact and-rubbed rings of porcine coronary arteries precontracted with high concentration of U46619. Results:The results showed a moderate antioxidant activity (40%), but potent anti-inflammatory activity (49.9%) on carrageenan-induced mice paw edema, and also as revealed by histopathologic examination, complete protection against AlCl3-induced hepatic toxicity. Relaxant effects of the same extract on vascular preparation from porcine aorta precontracted with high concentration of U46619 were considerable at 10-1 g/L, and comparable (P>0.05) between endothelium-intact (67.74%, IC50=0.04 mg/mL) and-rubbed (72.72%, IC50=0.075 mg/mL) aortic rings. Conclusions: The extract exerted significant anti-inflammatory, hepatoprotective and vasorelaxant activities, the latter being endothelium-independent believed to be mediated mainly by the ability of components present in the extract to exert antioxidant properties, probably related to an inhibition of Ca2+influx.

  2. Improved salt tolerance of Populus davidiana × P. bolleana overex-pressed LEA from Tamarix androssowii

    Institute of Scientific and Technical Information of China (English)

    Yanshuang Sun; Su Chen; Haijiao Huang; Jing Jiang; Shuang Bai; Guifeng Liu

    2014-01-01

    Development of transgenic plants with tolerance to environ-mental stress is an important goal of plant biotechnology. Late-embryogenesis-abundant (LEA) proteins accumulate in seeds dur-ing late embryogenesis, where they protect cellular membranes and macromolecules against drought. In this work, we transferred the Tamarix androssowii LEA gene into hybrids of Populus davidiana×P. bolleana. We compared relative rates of height growth, chlorophyll fluo-rescence kinetic parameters, and leaf Na+ levels of six TaLEA-containing lines with non-transferred plants (NT), all grown under 0.8% NaCl stress condition. Survival percentages of transgenic lines were all higher than for NT controls after rehydration and the sur-vival percentage of SL2 was five-fold higher than for NT controls. Seed-ling height increased 48.7%in SL2 (from the onset of induced stress to the end of the growing season), 31% more than for the NT controls. Chlorophyll fluorescence kinetic parameters showed a marked increase in photosynthetic capacity in SL2 and SL5. Na+levels in young leaves of transgenic lines were lower than in control NT leaves, but higher in yel-low and withered leaves, indicating improved salt tolerance in transgenic lines.

  3. Photosynthesis of Populus euphratica and its response to elevated CO2 concentration in an arid environment

    Institute of Scientific and Technical Information of China (English)

    Honghua Zhou; Yaning Chen; Weihong Li; Yapeng Chen; Lixin Fu

    2009-01-01

    The photosynthetic characterization of Populus euphratica and its response to the elevated carbon dioxide concentration ([CO2]) were analyzed based on its net photosynthetic rate (Pn),stomatal conductance (gs),intercellular CO2 concentration (Ci),transpiration rate (Tr),and water use efficiency (WUE) at different groundwater depths measured by a portable gas exchange system (LI-6400) in the lower reaches of the Tarim River.The results showed that the elevation of [CO2]decreased the gs,and increased the Pn,Ci and WUE of P.euphratica.However,the effects of the elevated [CO2]on gs,Pn,Ci and WUE varied considerably with groundwater depth.The response of photosynthesis to rising [CO2]was stronger at the greater groundwater depth (more than 6 m) than that at the shallower groundwater depth (less than 6 m).The critical groundwater depth required to maintain the normal survival of P.euphratica was less than 6 m.When the groundwater depth increased to more than 6 m,P.euphratica encountered moderate water stress,and the plant suffered severe water stress when the groundwater depth increased to more than 7 m.

  4. Comparative physiological and proteomic analyses of poplar (Populus yunnanensis plantlets exposed to high temperature and drought.

    Directory of Open Access Journals (Sweden)

    Xiong Li

    Full Text Available Plantlets of Populus yunnanensis Dode were examined in a greenhouse for 48 h to analyze their physiological and proteomic responses to sustained heat, drought, and combined heat and drought. Compared with the application of a single stress, simultaneous treatment with both stresses damaged the plantlets more heavily. The plantlets experienced two apparent response stages under sustained heat and drought. During the first stage, malondialdehyde and reactive oxygen species (ROS contents were induced by heat, but many protective substances, including antioxidant enzymes, proline, abscisic acid (ABA, dehydrin, and small heat shock proteins (sHSPs, were also stimulated. The plants thus actively defended themselves against stress and exhibited few pathological morphological features, most likely because a new cellular homeostasis was established through the collaborative operation of physiological and proteomic responses. During the second stage, ROS homeostasis was overwhelmed by substantial ROS production and a sharp decline in antioxidant enzyme activities, while the synthesis of some protective elements, such as proline and ABA, was suppressed. As a result, photosynthetic levels in P. yunnanensis decreased sharply and buds began to die, despite continued accumulation of sHSPs and dehydrin. This study supplies important information about the effects of extreme abiotic environments on woody plants.

  5. Assessment of Rhizospheric Microorganisms of Transgenic Populus tomentosa with Cowpea Trypsin Inhibitor (CpTI) Gene

    Institute of Scientific and Technical Information of China (English)

    2005-01-01

    To have a preliminary insight into biosafety of genetically transformed hybrid triploid poplars (Populus tomentosa × P. bolleana) × P. tomentosa with the cowpea trypsin inhibitor (CpTI) gene, two layers of rhizospheric soil (from 0 to 20 cm deep and from 20 to 40 cm deep, respectively) were collected for microorganism culture, counting assay and PCR analysis to assess the potential impact of transgenic poplars on non-target microorganism population and transgene dispersal. When the same soil layer of suspension stock solution was diluted at both 1:1 000 and 1:10 000 rates, there were no significant differences in bacterium colony numbers between the inoculation plates of both transgenic and non-transgenic poplars. The uniform results were revealed for both soil layer suspension solutions of identical poplars at both dilution rates except for non-transgenic poplars at 1:10 000 dilution rates from the same type of soil. No significant variation in morphology of both Gram-positive and Gram-negative bacteria was observed under the microscope. The potential transgene dispersal from root exudates or fallen leaves to non-target microbes was repudiated by PCR analysis, in which no CpTI gene specific DNA band was amplified for 15 sites of transgenic rhizospheric soil samples. It can be concluded that transgenic poplar with the CpTI gene has no severe impact on rhizospheric microorganisms and is tentatively safe to surrounding soil micro-ecosystem.

  6. Population genetics of freeze tolerance among natural populations of Populus balsamifera across the growing season.

    Science.gov (United States)

    Menon, Mitra; Barnes, William J; Olson, Matthew S

    2015-08-01

    Protection against freeze damage during the growing season influences the northern range limits of plants. Freeze tolerance and freeze avoidance are the two major freeze resistance strategies. Winter survival strategies have been extensively studied in perennials, but few have addressed them and their genetic basis during the growing season. We examined intraspecific phenotypic variation in freeze resistance of Populus balsamifera across latitude and the growing season. To investigate the molecular basis of this variation, we surveyed nucleotide diversity and examined patterns of gene expression in the poplar C-repeat binding factor (CBF) gene family. Foliar freeze tolerance exhibited latitudinal and seasonal variation indicative of natural genotypic variation. CBF6 showed signatures of recent selective sweep. Of the 46 SNPs surveyed across the six CBF homologs, only CBF2_619 exhibited latitudinal differences consistent with increased freeze tolerance in the north. All six CBF genes were cold inducible, but showed varying patterns of expression across the growing season. Some Poplar CBF homologs exhibited patterns consistent with historical selection and clinal variation in freeze tolerance documented here. However, the CBF genes accounted for only a small amount of the variation, indicating that other genes in this and other molecular pathways likely play significant roles in nature. PMID:25809016

  7. Analysis of synonymous codon usage in chloroplast genome of Populus alba

    Institute of Scientific and Technical Information of China (English)

    ZHOU Meng; LONG Wei; LI Xia

    2008-01-01

    The pattern of codon usage in the chloroplast genome of Populus alba was investigated.Correspondence analysis (a commonly used multivariate statistical approach) and method of effective number of codons (ENc)-plot were conducted to analyze synonymous codon usage.The results of correspondence analysis showed that the distribution of genes on the major axis was significantly correlated with the frequency of use of G+C in synonymously variable third position of sense codon (GC3S),(r=0.349),and the positions of genes on the axis 2 and axis 3 were significantly correlated with CAI (r=-0.348,p<0.01 and r=0.602,p<0.01).The ENc for most genes was similar to that for the expected ENc based on the GC3S,but several genes with low ENC values were lying below the expected curve.All of these data indicated that codon usage was dominated by a mutational bias in chloroplast genome of P.alba.The selection in nature for translational efficiency only played a minor role in shaping codon usage in the chloroplast genome of P.alba.

  8. Metabolic functions of Pseudomonas fluorescens strains from Populus deltoides depend on rhizosphere or endosphere isolation compartment

    Directory of Open Access Journals (Sweden)

    Collin M Timm

    2015-10-01

    Full Text Available The bacterial microbiota of plants is diverse, with 1,000s of operational taxonomic units (OTUs associated with any individual plant. In this work we investigate the differences between 19 sequenced Pseudomonas fluorescens strains, isolated from Populus deltoides rhizosphere and endosphere and which represent a single OTU, using phenotypic analysis, comparative genomics, and metabolic models. While no traits were exclusive to either endosphere or rhizosphere P. fluorescens isolates, multiple pathways relevant for plant-bacterial interactions are enriched in endosphere isolate genomes. Further, growth phenotypes such as phosphate solubilization, protease activity, denitrification and root growth promotion are biased towards endosphere isolates. Endosphere isolates have significantly more metabolic pathways for plant signaling compounds and an increased metabolic range that includes utilization of energy rich nucleotides and sugars, consistent with endosphere colonization. Rhizosphere P. fluorescens have fewer pathways representative of plant-bacterial interactions but show metabolic bias towards chemical substrates often found in root exudates. This work reveals the diverse functions that may contribute to colonization of the endosphere by bacteria and are enriched among closely related isolates.

  9. Characteristics and dynamics analysis of Populus euphratica populations in the middle reaches of Tarim River

    Institute of Scientific and Technical Information of China (English)

    JunXia WU; XiMing ZHANG; ChaoZhou DENG; GuoJun LIU; Hong LI

    2010-01-01

    Populus euphratica Oliv.is widely distributed along the Tarim River.Maintaining stability of P.euphratica population is important to local development.This study explored the static life table,survivorship curves and four function curves(survival rate,cumulative mortality rate,mortality density,and hazard rate),and development index of P.euphratica population in the middle reaches of Tarim River.The results indicated that the age structure of P.euphratica population belonged to positive pyramidal type,which meant young age-class individuals occupied most populations.The number of Ⅰ-Ⅱ age classes accounted for 66.2% of whole population,and this indicated that there were abundant subsequent seedlings resources to support the growth of P.euphratica population in the middle reaches of Tarim River.The survivorship curve of P.euphratica belonged to the Deevey Ⅲ(concave-type)and the development index was 47.72%.Four function curves revealed that the individuals of P.euphratica sharply decreased at the initial stage and then leveled off at the late stage of survival curve.Time sequence prediction models predicted that the number of midlife individuals would increase in future 10,20,30 years,and P.euphratica population grew steadily as a result of rich saplings.

  10. Water stress induces changes in polyphenol profile and antioxidant capacity in poplar plants (Populus spp.).

    Science.gov (United States)

    Popović, B M; Štajner, D; Ždero-Pavlović, R; Tumbas-Šaponjac, V; Čanadanović-Brunet, J; Orlović, S

    2016-08-01

    This paper is aimed to characterize young poplar plants under the influence of water stress provoked by polyethileneglycol 6000 (PEG 6000). Three polar genotypes (M1, B229, and PE19/66) were grown in hydroponics and subjected to 100 and 200 mOsm PEG 6000 during six days. Polyphenol characterization, two enzymatic markers and antioxidant capacity in leaves and roots were investigated in stressed plants. Total phenol content, ferric reducing antioxidant capacity (FRAP) and DPPH antiradical power (DPPH ARP) were determined for estimating total antioxidant capacity. Polyphenol oxidase (PPO) and phenylalanine ammonia lyase (PAL) were determined as enzymatic markers. Polyphenol characterization of poplar samples was performed by HPLC-PDA analysis. All results were subjected to correlation analysis and principal component analysis (PCA). Inspite of the decrease of total phenol content in investigated genotypes, as well as total antioxidant capacity, some of polyphenols were affected by stress like flavonoids chrysin, myricetine, kaempferol and isoferulic acid in roots of B229 genotype (Populus deltoides). Genotype B229 also showed the increase of antioxidant capacity and PAL activity in root and leaves under stress what could be the indicator of the adaptability of poplar plants to water stress. Significant positive correlations were obtained between PAL, antioxidant capacity as well as phenolic acids among themselves. Chemometric evaluation showed close interdependence between flavonoids, FRAP, DPPH antiradical power and both investigated enzymes of polyphenol metabolism, PAL and PPO. PMID:27116372

  11. PROCESS OPTIMIZATION OF TETRA ACETYL ETHYLENE DIAMINE ACTIVATED HYDROGEN PEROXIDE BLEACHING OF POPULUS NIGRA CTMP

    Directory of Open Access Journals (Sweden)

    Qiang Zhao

    2010-02-01

    Full Text Available To enhance the bleaching efficiency, the activator of tetra acetyl ethylene diamine (TAED was used in conventional H2O2 bleaching. The H2O2/TAED bleaching system can accelerate the reaction rate and shorten bleaching time at relative low temperature, which can reduce the production cost. In this research, the process with hydrogen peroxide activated by TAED bleaching of Populus nigra chemi-thermo mechanical pulp was optimized. Suitable bleaching conditions were confirmed as follows: pulp consistency 10%, bleaching temperature 70oC, bleaching time 60 min when the charge of H2O2 was 4%, NaOH charge 2%, and molar ratio of TAED to H2O2 0.3. The pulp brightness gain reached 23.6% ISO with the optimized bleaching conditions. FTIR analysis indicated that the H2O2/TAED bleaching system can decrease carbonyl group further than that of conventional H2O2 bleaching, which contributed to the higher bleaching efficiency and final brightness. The H2O2/TAED bleaching had stronger oxidation ability on lignin than that of H2O2 bleaching.

  12. Diversity of soil microorganisms in natural Populus euphratica forests in Xinjiang, northwestern China

    Institute of Scientific and Technical Information of China (English)

    Haili QIAO; Chengming TIAN; Youqing LUO; Jianhua SUN; Xiaofeng FENG

    2008-01-01

    To better understand the distribution of soil microorganisms in Populus euphratica forests in Xin-jiang, northwestern China, we studied and compared the populations and numbers of bacteria, fungi and actino-mycetes in the soil at four different age stages of natural P. euphratica forests, i.e., juvenile forests, middle-aged for-ests, over-mature forests and degraded forests. Results showed that there were clear differences in the amount of microorganism biomass and composition rates across the four forest stages. Dominant and special microorgan-isms were present in each of the four different soil layers.The vertical distribution showed that the microorganism biomass decreased with increasing soil depth. The popu-lation of microorganisms was the lowest at 31-40 cm of soil depth. The microorganisms consisted of bacteria, actinomycetes, as well as fungi. Bacteria were the chief component of microorganisms and were widely distribu-ted, but fungi were scarce in some soil layers. Aspergillus was the dominant genus among the 11 genera of fungi isolated from the soil in different age stages of P. euphra-tica forests.

  13. Biochemical and Physiological Studies on the Effects of Senescence Leaves of Populus deltoides on Triticum vulgare

    Directory of Open Access Journals (Sweden)

    Tejinder Pal Khaket

    2014-01-01

    Full Text Available Triticum vulgare (Wheat based products are the major dietary source of food in developing countries. In India, it grows in association with boundary plantations of Populus deltoids (poplar. During winter, poplar enters in dormancy which cause a heavy leaf fall at the time of wheat seed germination. Large number of poplar senescence leaves may adversely affect the wheat. Therefore, the present study was performed to examine the effect of senescence poplar leaves on wheat germ and some other biochemical parameters. Seed’s germination rate was determined by measuring root and shoot lengths, percent germination, germination index, and inhibition percentage. Biochemical parameters, namely, pigment, carbohydrate, protein, and phenol content, were estimated. Activities of catalase and polyphenol oxidase which are stress marker enzymes were also measured. Results revealed that germination and other biochemical parameters of wheat were severely affected by senescence poplar leaves even at very low concentration. So, intercropping of poplar along with wheat may be chosen carefully as wheat is the major dietary staple.

  14. Differential transcriptome analysis between Populus and its synthesized allotriploids driven by second-division restitution.

    Science.gov (United States)

    Cheng, Shiping; Huang, Zhen; Li, Yun; Liao, Ting; Suo, Yujing; Zhang, Pingdong; Wang, Jun; Kang, Xiangyang

    2015-12-01

    In this report, we compared transcriptomic differences between a synthetic Populus section Tacamahaca triploid driven by second-division restitution and its parents using a high-throughput RNA-seq method. A total of 4,080 genes were differentially expressed between the high-growth vigor allotriploids (SDR-H) and their parents, and 719 genes were non-additively expressed in SDR-H. Differences in gene expression between the allotriploid and male parent were more significant than those between the allotriploid and female parent, which may be caused by maternal effects. We observed 3,559 differentially expressed genes (DEGs) between the SDR-H and male parent. Notably, the genes were mainly involved in metabolic process, cell proliferation, DNA methylation, cell division, and meristem and developmental growth. Among the 1,056 DEGs between SDR-H and female parent, many genes were associated with metabolic process and carbon utilization. In addition, 1,789 DEGs between high- and low-growth vigor allotriploid were mainly associated with metabolic process, auxin poplar transport, and regulation of meristem growth. Our results indicated that the higher poplar ploidy level can generate extensive transcriptomic diversity compared with its parents. Overall, these results increased our understanding of the driving force for phenotypic variation and adaptation in allopolyploids driven by second-division restitution.

  15. Genome-wide analysis of BURP domain-containing genes in Populus trichocarpa.

    Science.gov (United States)

    Shao, Yuanhua; Wei, Guo; Wang, Ling; Dong, Qing; Zhao, Yang; Chen, Beijiu; Xiang, Yan

    2011-09-01

    BURP domain-containing proteins have a conserved structure and are found extensively in plants. The functions of the proteins in this family are diverse, but remain unknown in Populus trichocarpa. In the present study, a complete genome of P. trichocarpa was analyzed bioinformatically. A total of 18 BURP family genes, named PtBURPs, were identified and characterized according to their physical positions on the P. trichocarpa chromosomes. A phylogenetic tree was generated from alignments of PtBURP protein sequences, while phylogenetic relationships were also examined between PtBURPs and BURP family genes in other plants, including rice, soybean, maize and sorghum. BURP genes in P. trichocarpa were classified into five classes, namely PG1β-like, BNM2-like, USP-like, RD22-like and BURP V. The multiple expectation maximization for motif elicitation (MEME) and multiple protein sequence alignments of PtBURPs were also performed. Results from the transcript level analyses of 10 PtBURP genes under different stress conditions revealed the expression patterns in poplar and led to a discussion on genome duplication and evolution, expression profiles and function of PtBURP genes. PMID:21767343

  16. Influence of climatic factors on fruit morphological traits in Populus euphratica Oliv.

    Directory of Open Access Journals (Sweden)

    Azam Soleimani

    2014-07-01

    Full Text Available Populus euphratica Oliv. is a native species in arid and semi- arid zone of Iran distributing naturally in the vast regions. We studied the variation in fruit morphological traits in P. euphratica trees originating from seven provenances of Iran. P. euphratica samples were prepared from Karaj Research Station. In this study, catkin length, number of capsules in each catkin, capsule length, capsule width, capsule length to capsule width ratio, number of seeds in each capsule, seed length, seed width, seed length to seed width ratio, the weight of 1000 seeds and germination rate were measured. Analysis of variance on all morphological traits except germination showed significant differences (P < 0.05 among provenances. In addition, positive significant correlations were observed in some of the fruit morphological traits. Capsule length, seed length and number of seeds in each capsule showed a significant positive correlation with mean annual  precipitation, mean annual temperature and longitude. Seed width showed a significant negative correlation with longitude and latitude. The results show that morphological fruit characteristics in P. euphratica are mainly influenced by the mean annual temperature of the origins.

  17. Map and analysis of microsatellites in the genome of Populus: The first sequenced perennial plant

    Institute of Scientific and Technical Information of China (English)

    2007-01-01

    We mapped and analyzed the microsatellites throughout 284295605 base pairs of the unambiguously assembled sequence scaffolds along 19 chromosomes of the haploid poplar genome. Totally, we found 150985 SSRs with repeat unit lengths between 2 and 5 bp. The established microsatellite physical map demonstrated trat SSRs were distributed relatively evenly across the genome of Populus. On average, These SSRs occurred every 1883 bp within the poplar genome and the SSR densities in intergenic regions, introns, exons and UTRs were 85.4%, 10.7%, 2.7% and 1.2%, respectively. We took di-, tri-, tetra-and pentamers as the four classes of repeat units and found that the density of each class of SSRs decreased with the repeat unit lengths except for the tetranucleotide repeats. It was noteworthy that the length diversification of microsatellite sequences was negatively correlated with their repeat unit length and the SSRs with shorter repeat units gained repeats faster than the SSRs with longer repeat units. We also found that the GC content of poplar sequence significantly correlated with densities of SSRs with uneven repeat unit lengths (tri- and penta-), but had no significant correlation with densities of SSRs with even repeat unit lengths (di- and tetra-). In poplar genome, there were evidences that the occurrence of different microsatellites was under selection and the GC content in SSR sequences was found to significantly relate to the functional importance of microsatellites.

  18. Drying Kinetics of Poplar (Populus Deltoides Wood Particles by a Convective Thin Layer Dryer

    Directory of Open Access Journals (Sweden)

    Hamid Zarea Hosseinabadi

    2012-09-01

    Full Text Available Drying of poplar wood (Populus Deltoides particles was carried out at different drying conditions using a laboratory convective thin layer dryer. Drying curves were plotted and in order to analyze the drying behavior, the curves were fi tted to different semi-theoretical drying kinetics models. The effective moisture diffusivity was also determined from the integrated Fick’s second law equation and correlated with temperature using an Arrhenius- type model to calculate activation energy of diffusion. The results showed that Midilli et al. model was found to satisfactorily describe the drying characteristics of poplar wood particles dried at all temperatures and air flow velocities. In general, the drying rate increases with increasing air temperature and air fl ow velocity. A short constant drying rate period was observed and drying frequently took place at falling rate period in all cases. The effective moisture diffusivity of poplar wood particles increased from 1.01E-10 to 2.53E-10 m2·s-1 as the drying air temperature increased from 65 to 85 °C. The activation energy of diffusion for 1 m·s-1 and 1.5 m·s-1 air flow velocities were calculated as 27.8 kJ·mol-1 and 50.8 kJ·mol-1, respectively.

  19. [Simulation of soil water dynamics in triploid Populus tomentosa root zone under subsurface drip irrigation].

    Science.gov (United States)

    Xi, Ben-Ye; Jia, Li-Ming; Wang, Ye; Li, Guang-De

    2011-01-01

    Based on the observed data of triploid Populus tomentosa root distribution, a one-dimensional root water uptake model was proposed. Taking the root water uptake into account, the soil water dynamics in triploid P. tomentosa root zone under subsurface drip irrigation was simulated by using HYDRUS model, and the results were validated with field experiment. Besides, the HYDRUS model was used to study the effects of various irrigation technique parameters on soil wetting patterns. The RMAE for the simulated soil water content by the end of irrigation and approximately 24 h later was 7.8% and 6.0%, and the RMSE was 0.036 and 0.026 cm3 x cm(-3), respectively, illustrating that the HYDRUS model performed well in simulating the short-term soil water dynamics in triploid P. tomentosa root zone under drip irrigation, and the root water uptake model was reasonable. Comparing with 2 and 4 L x h(-1) of drip discharge and continuous irrigation, both the 1 L x h(-1) of drip discharge and the pulsed irrigation with water applied intermittently in 30 min periods could increase the volume of wetted soil and reduce deep percolation. It was concluded that the combination of 1 L x h(-1) of drip discharge and pulsed irrigation should be the first choice when applying drip irrigation to triploid P. tomentosa root zone at the experiment site. PMID:21548283

  20. Molecular and dendrochronological analysis of natural root grafting in Populus tremuloides (Salicaceae).

    Science.gov (United States)

    Jelínková, Hana; Tremblay, Francine; Desrochers, Annie

    2009-08-01

    Trembling aspen (Populus tremuloides) is a clonal tree species, which regenerates mostly through root suckering. In spite of vegetative propagation, aspen maintains high levels of clonal diversity. We hypothesized that the maintenance of clonal diversity in this species can be facilitated by integrating different clones through natural root grafts into aspen's communal root system. To verify this hypothesis, we analyzed root systems of three pure aspen stands where clones had been delineated with the help of molecular markers. Grafting between roots was frequent regardless of their genotypes. Root system excavations revealed that many roots were still living below trees that had been dead for several years. Some of these roots had no root connections other than grafts to living ramets of different clones. The uncovered root systems did not include any unique genotypes that would not occur among stems. Nevertheless, acquiring roots of dead trees helps to maintain extensive root systems, which increases the chances of clone survival. Substantial interconnectivity within clones as well as between clones via interclonal grafts results in formation of large genetically diverse physiological units. Such a clonal structure can significantly affect interpretations of diverse ecophysiological processes in forests of trembling aspen. PMID:21628295

  1. Genic diversity of natural populations of a clone-forming tree Populus tremuloides

    Energy Technology Data Exchange (ETDEWEB)

    Cheliak, W.M.; Dancik, B.P.

    1982-01-01

    Effects of asexual reproduction as a primary reproductive strategy on population structure and levels of variability were investigated electrophoretically in natural populations of a woody plant species, trembling aspen (Populus tremuloides Michx.). from Alberta. As expected, levels of genic diversity, 42%, and proportion of polymorphic loci, 92%, averaged over all clones are considerably greater than those reported for comparable samples of sexually reproducing plant and animal species. These measures of genic variability of a primary asexual plant species are similar to those reported for asexual species of insects, fish and bacteria. In addition, each of 222 clones was electrophoretically unique. Since neutral theory would predict each individual clone to be heterozygous for a unique mutation at each gene locus at equilibrium, these results can be interpreted in a number of ways: (i) insufficient time to reach equilibrium, (ii) inability of electrophoresis to detect all variation at a locus, (iii) periodic establishment of sexually derived propagules in the population, and (iv) selection for similar genotypes at each location or against mutations at particular gene loci. Re-invasion of Pleistocene-glaciated areas by trembling aspen was likely by sexual means, with subsequent reproduction being primarily asexual. (Refs. 26)

  2. OVER- EXPRESSION OF AN AUX1 HOMOLOG TRIGGERS OVARY INITIATION IN VITRO OF POPULUS TOMENTOSA CARR.

    Institute of Scientific and Technical Information of China (English)

    2007-01-01

    PtAUX1, an ortholog of Arabidopsis AtAUX1 ( encoding auxin influx carrier protein), has been cloned from Populus tomentosa. PtAUX1 protein is similar to Arabidopsis AtAUX1 in structure, but PtAUX1 contains an additional cAMP/cGMP - dependent protein kinase phosphorylation site. Its overexpression lines driven by 35S promoter exhibits a novel phenotype related flower development which has not been revealed in AtAUX1 mutants. Ovary - like structures each with 1 ~ 2 styles, but without a cup - like disc and a bract, can initial from regenerated transgenic bud in cluster,resembling an inflorescence. The histological dissections illuminate that the ovary - like structures have womb and transmitting tissue inner its styles, but no ovules. PtAUX1 expression pattern are ubiquitous and various in different organs,which is coincident with its candidate auxin influx, functioning in distributing auxin thorough a plant body. These results suggest that PtAUX1 or polar auxin transport has a substantial function in floral organ initiation.

  3. Comparative Genomic Study of the Thioredoxin Family in Photosynthetic Organisms with Emphasis on Populus trichocarpa

    Institute of Scientific and Technical Information of China (English)

    Kamel Chibani; Gunnar Wingsle; Jean-Pierre Jacquot; Eric Gelhaye; Nicolas Rouhier

    2009-01-01

    The recent genome sequencing of Populus trichocarpa and Vitis vinifera, two models of woody plants, of Sorghum bicolor, a model of monocot using C4 metabolism, and of the moss Physcomitrella patens, together with the availability of photosynthetic organism genomes allows performance of a comparative genomic study with organisms having different ways of life, reproduction modes, biological traits, and physiologies. Thioredoxins (Trxs) are small ubiq-uitous proteins involved in the reduction of disulfide bridges in a variety of target enzymes present in all sub-cellular compartments and involved in many biochemical reactions. The genes coding for these enzymes have been identified in these newly sequenced genomes and annotated. The gene content, organization and distribution were compared to other photosynthetic organisms, leading to a refined classification. This analysis revealed that higher plants and bryo-phytes have a more complex family compared to algae and cyanobacteria and to non-photosynthetic organisms, since poplar exhibits 49 genes coding for typical and atypical thioredoxins and thioredoxin reductases, namely one-third more than monocots such as Oryza sativa and S. bicolor. The higher number of Trxs in poplar is partially explained by gene duplication in the Trx m, h, and nucleoredoxin classes. Particular attention was paid to poplar genes with emphasis on Trx-like classes called Clot, thioredoxin-like, thioredoxins of the lilium type and nucleoredoxins, which were not described in depth in previous genomic studies.

  4. Deep annotation of Populus trichocarpa microRNAs from diverse tissue sets.

    Directory of Open Access Journals (Sweden)

    Joshua R Puzey

    Full Text Available Populus trichocarpa is an important woody model organism whose entire genome has been sequenced. This resource has facilitated the annotation of microRNAs (miRNAs, which are short non-coding RNAs with critical regulatory functions. However, despite their developmental importance, P. trichocarpa miRNAs have yet to be annotated from numerous important tissues. Here we significantly expand the breadth of tissue sampling and sequencing depth for miRNA annotation in P. trichocarpa using high-throughput smallRNA (sRNA sequencing. miRNA annotation was performed using three individual next-generation sRNA sequencing runs from separate leaves, xylem, and mechanically treated xylem, as well as a fourth run using a pooled sample containing vegetative apices, male flowers, female flowers, female apical buds, and male apical and lateral buds. A total of 276 miRNAs were identified from these datasets, including 155 previously unannotated miRNAs, most of which are P. trichocarpa specific. Importantly, we identified several xylem-enriched miRNAs predicted to target genes known to be important in secondary growth, including the critical reaction wood enzyme xyloglucan endo-transglycosylase/hydrolase and vascular-related transcription factors. This study provides a thorough genome-wide annotation of miRNAs in P. trichocarpa through deep sRNA sequencing from diverse tissue sets. Our data significantly expands the P. trichocarpa miRNA repertoire, which will facilitate a broad range of research in this major model system.

  5. Urbanization-related changes in European aspen (Populus tremula L.): Leaf traits and litter decomposition

    International Nuclear Information System (INIS)

    We investigated foliar and litter responses of European aspen (Populus tremula L.) to urbanization, including factors such as increased temperature, moisture stress and nitrogen (N) deposition. Leaf samples were collected in 2006-2008 from three urban and three rural forest stands in the Helsinki Metropolitan Area, southern Finland, and reciprocal litter transplantations were established between urban and rural sites. Urban leaves exhibited a higher amount of epicuticular waxes and N concentration, and a lower C:N ratio than rural ones, but there was no difference in specific leaf area. Urban litter had a slightly higher N concentration, lower concentrations of lignin and total phenolics, and was more palatable to a macrofaunal decomposer. Moreover, litter decay was faster at the urban site and for urban litter. Urbanization thus resulted in foliar acclimatization in terms of increased amount of epicuticular waxes, as well as in accelerated decomposition of the N-richer leaf litter. - Urbanization can modify leaf traits of aspen and accelerate litter decomposition through changes in litter traits as well as in environmental conditions at the decomposition site.

  6. Characteristics and dynamics analysis of Populus euphratica populations in the middle reaches of Tarim River

    Institute of Scientific and Technical Information of China (English)

    2010-01-01

    Populus euphratica Oliv. is widely distributed along the Tarim River. Maintaining stability of P. euphratica population is important to local development. This study explored the static life table, survivorship curves and four function curves (survival rate, cumulative mortality rate, mortality density, and hazard rate), and development index of P. euphratica population in the middle reaches of Tarim River. The results indicated that the age structure of P. euphratica population belonged to positive pyramidal type, which meant young age-class individuals occupied most populations. The number ofⅠ-Ⅱage classes accounted for 66.2% of whole population, and this indicated that there were abundant subsequent seedlings resources to support the growth of P. euphratica population in the middle reaches of Tarim River. The survivorship curve of P. euphratica belonged to the Deevey Ⅲ (concave-type) and the development index was 47.72%. Four function curves revealed that the individuals of P. euphratica sharply decreased at the initial stage and then leveled off at the late stage of survival curve. Time sequence prediction models predicted that the number of midlife individuals would increase in future 10, 20, 30 years, and P. euphratica population grew steadily as a result of rich saplings.

  7. Degradation of exogenous caffeine by Populus alba and its effects on endogenous caffeine metabolism.

    Science.gov (United States)

    Pierattini, Erika C; Francini, Alessandra; Raffaelli, Andrea; Sebastiani, Luca

    2016-04-01

    This is the first study reporting the presence of endogenous caffeine, theobromine, and theophylline in all organs of poplar plants. Liquid chromatography coupled with tandem mass spectrometry (LC-MS/MS) was used in order to evaluate the uptake, translocation, and metabolism of caffeine-(trimethyl-(13)C) in Populus alba L. Villafranca clone grown in hydroponic conditions. We investigated the remediation of caffeine since it is one of the most widely consumed drugs and it is frequently detected in wastewater treatment plant effluents, surface water, and groundwater worldwide. Our results demonstrated that poplar can absorb and degrade exogenous caffeine without negative effects on plant health. Data showed that concentrations of all endogenous compounds varied depending on caffeine-(trimethyl-(13)C) treatments. In particular, in control conditions, endogenous caffeine, theobromine, and theophylline were mainly distributed in roots. On the other hand, once caffeine-(trimethyl-(13)C) was provided, this compound and its dimethy-(13)C metabolites are mainly localized at leaf level. In conclusion, our results support the possible use of Villafranca clone in association with other water treatment systems in order to complete the process of caffeine remediation. PMID:26681326

  8. MECHANICAL PROPERTIES OF POPLAR WOOD (POPULUS ALBA DRIED BY THREE KILN DRYING SCHEDULES

    Directory of Open Access Journals (Sweden)

    Mahdi Shahverdi,

    2012-01-01

    Full Text Available The influence of three drying schedules on the selected mechanical properties of poplar wood (Populus alba L. was evaluated in terms of suitability for structural applications. For this purpose, 70 mm-thick poplar lumber was conventionally dried by three different moisture content based schedules of T5-D2, T5-D4, and T5-D6. In these schedules, the wet bulb depression was changed as a means of increasing of the drying intensity. After drying, the mechanical properties of the lumber, including bending properties (MOE and MOR, toughness, shear strength parallel to grain, and tensile strength perpendicular to grain, were measured. Results revealed that the severe drying schedule (T5-D6 caused higher reductions in the mechanical properties of the dried boards, particularly the MOE and MOR. Furthermore, toughness and tensile strength perpendicular to grain were not affected by the increasing of the wet bulb depression. The influence of all the three adopted schedules on the mechanical properties was evaluated using the drying rate, final moisture content gradient, and qualitative characteristics of the dried boards.

  9. Temperature Evolution in Poplar (Populus nigra Tension Wood and Normal Wood during a Conventional Drying Process

    Directory of Open Access Journals (Sweden)

    Asghar TARMIAN

    2011-08-01

    Full Text Available In this paper, temperature evolution through tension wood and normal wood in poplar (Populus nigra under a convective drying condition was investigated. Flat-sawn boards with green dimensions 80�40�25 mm were dried at constant dry-bulb temperature of 60�C and relative humidity (RH of 50% to a final moisture content of about 8%. They were coated on four surfaces using aluminum foil bonded with polyurethane (PU glue to confine moisture movement along the board thickness. The measurement of board temperature was carried out at 2.5, 5, 7.5, 10 and 12.5 mm along the board thickness every 20 minutes by means of 1 mm-thermocouples. The pattern of temperature profile was observed to be almost similar for both tension wood and normal wood. However, a slightly steeper temperature gradient occurred in the normal wood compared to the tension wood. In both types of woods, the surface temperature rose progressively from the initial value to the dry-bulb temperature but the core temperature remained at an almost constant value as the wet-bulb temperature even at the end of drying.

  10. Effects of Planting Density on Growth of New Clones in Populus tomentosa

    Institute of Scientific and Technical Information of China (English)

    Zhang Zihui; Zhang Zhiyi; Lin Shanzhi; Li Xinguo

    2003-01-01

    Effects of seven planting densities on the growth and tree form of nine 5-year-old new clones in Populus tomentosa were studied. The plantations, arranged with completely random block design, were located in Wuzhi County, Henan Province. Results indicated that effects of planting density on the diameter at breast height (DBH), individual volume and growing stock increment of all new clones in P. tomentosa were significant at the 1% level of probability, effects of planting density on the tree height increment of new clones B2 and B31 and on the live branches height (LBH) increment of new clones B5 and B30 were significant at the 5% level of probability, while the interaction between planting density and clone was not significant at the 5% level of probability. It was concluded that the degree of differences among new clones within the same planting density was different with different planting densities and traits. For short rotation industrial timber, clones B1, B3, B4, B5, B7, B9, B31 were suitable with the density of 1 000-2 500 trees per hectare, while for bigger diameter timber, clones B1, B3, B4, B7, B9, B31 could be used with the planting density of 660-833 trees per hectare. Clonal repeatability was also different in different planting densities.

  11. Hydrological Response of Populus euphratica Olve. Radial Growth in Ejinaa Banner, Inner Mongolia

    Institute of Scientific and Technical Information of China (English)

    Pu-Xing Liu; Jian-Feng Peng; Fa-Hu Chen

    2007-01-01

    Populus euphratica Olve. is a dominant tree species in Ejinaa Oasis of the lower reaches of the Helhe River, Inner Mongolia, China. In recent years, the population of this species has shown signs of degradation that are suggested to be probably associated with the decrease of surface water. In this study, the history of river runoff In this region was examined with a dendrochronological study of P. euphratica from four sites. it is found that tree-ring widths in the all sites have negative correlation with runoffs of all months at the Zhengyixia hydrological station. Principal component (PC) analysis of the tree-ring chronologies shows that the first PC (PC1) accounts for 49.98% of the total variances. The first PC is found to have a significantly negative correlation with runoffs In March and April (-0.52 and- 0.43, respectively, P<0.05). This negative correlation might be related to varlatlons In the depth of underground water.

  12. Water and energy consumption of Populus spp. bioenergy systems: A case study in Southern Europe

    Energy Technology Data Exchange (ETDEWEB)

    Sevigne, Eva [SosteniPrA (UAB-IRTA), Institut de Ciencia i Tecnologia Ambientals (ICTA), Universitat Autonoma de Barcelona (UAB), 08193 Bellaterra, Barcelona (Spain); Gasol, Carles M. [SosteniPrA (UAB-IRTA), Institut de Ciencia i Tecnologia Ambientals (ICTA), Universitat Autonoma de Barcelona (UAB), 08193 Bellaterra, Barcelona (Spain); Inedit Innovacio S.L. Parc de Recerca de la Universitat Autonoma de Barcelona (UAB), Carretera de Cabrils Km2, 08348 Barcelona (Spain); Brun, Filippo [Dipartimento di Economia e Ingegneria Agraria Forestale e Ambientale, University of Torino (Italy); Rovira, Laura; Pages, Josep Maria; Camps, Francesc [IRTA-Mas Badia, Institut de Recerca i Tecnologia Agroalimentaria (IRTA), Estacion Experimental Fundacion Mas Badia Ctra, De la Tallada, s/n, 17134 La Tallada, Girona (Spain); Rieradevall, Joan; Gabarrell, Xavier [SosteniPrA (UAB-IRTA), Institut de Ciencia i Tecnologia Ambientals (ICTA), Universitat Autonoma de Barcelona (UAB), 08193 Bellaterra, Barcelona (Spain); Chemical Engineering Department, Universitat Autonoma de Barcelona (UAB), 08193 Bellaterra, Barcelona (Spain)

    2011-02-15

    With the objectives of climate change mitigation and energy independence, energy crops have been proposed as an alternative to fossil fuels. In recent years short rotation energy crops have been promoted because they provide biomass in short periods of time. However, the impacts of water consumption, in both the impact on the energy balance due to the consumption of irrigation as the impacts on existing water resources, have not been analyzed in depth. This study evaluates the relationship between water, energy and CO{sub 2} emissions of a plot of Populus spp. in Spain with the aim of evaluating the feasibility of its implementation as large-scale cultivation. For the energy and environmental assessment it has been used the life cycle analysis methodology. The results show positive energy balance and environmental improvement respect other energies such as natural gas. Consumption of water required to avoid a kg of CO{sub 2} is 4.6 m{sup 3} and per unit of energy obtained is 45 m{sup 3} GJ{sup -1} considering a life cycle approach and in relation to the water availability of the basin could increase the pressure. Hence, in order to establish energy crops for climate change mitigation water consumption associated must be taken into account for future energy planning. (author)

  13. Overexpression of phospholipase Dα gene enhances drought and salt tolerance of Populus tomentosa

    Institute of Scientific and Technical Information of China (English)

    ZHANG TingTing; SONG YunZhi; LIU YuDong; GUO XingQi; ZHU ChangXiang; WEN FuJiang

    2008-01-01

    The cDNA of AtPLDα (Arabidopsis thaliana Phospholipase Da) gene was introduced into P. tomentosa (Populus tomentosa) under the control of the Cauliflower mosaic virus 35S promoter. Southern and Northern blot analyses suggested that the AtPLDα gene has been transferred into the P. tomentosa genome. No obvious morphological or developmental difference was observed between the transgenic and wild-type (WT) plants. Drought and salt tolerance and gene expression of seedlings of several transgenic lines and WT plants (control) were studied. The results showed that the rhizogenesis rate and the average root-length of transgenic lines were significantly higher than WT plants after mannitol and NaCl treatment under the same growth conditions. Northern blot analysis indicated that the higher the PLDα expression in the transgenic plants, the more tolerant the transgenic plants are to drought and salt treatment. Meanwhile, another group of these transgenic lines and WT plants (control) were treated with PEG6000 and NaCI separately. The contents of chlorophylls and the activities of some antioxidant enzymes (superoxide dismutase, guaiacol peroxidase and catalase) as well as malondialdehyde and relative electrical conductivity were analyzed. Altogether, our results demonstrated that overexpression of the PLDα gene can enhance the drought and salt tolerance in transgenic P. tomentosa plants.

  14. Spatial distribution characteristics of fine roots of Populus euphratica in a desert riparian forest

    Institute of Scientific and Technical Information of China (English)

    Jianhua SI; Qi FENG; Jianlin LI; Jian ZHAO

    2008-01-01

    The soil-plant system is a very important sub-system of the soil-plant-atmosphere continuum (SPAC). The water uptake by plant roots is an important subject in the research on water transport in this SPAC and is also the most active study direction in the fields of ecology, hydrology and environment. The study of the spatial dis-tribution pattern of fine roots of plants is the basis of constructing a water absorption model of plant roots. Our study on the spatial distribution pattern of fine roots of Populus euphratica in a desert riparian forest shows that the density distribution of its root lengths can be expressed horizontally as a parabola. The fine roots are concen-trated within the range of 0-350 cm from the tree trunk and their amount accounts for 91.9% of the total root mass within the space of 0-500 cm. In the vertical dir-ection, the density distribution of the fine root lengths shows a negative exponential relation with soil depth. The fine roots are concentrated in the 0-80 cm soil layer, accounting for 96.8% of the total root mass in the 0-140 cm soil layer.

  15. Comparison of stomatal characteristics and photosynthesis of polymorphic Populus euphratica leaves

    Institute of Scientific and Technical Information of China (English)

    ZHENG Caixia; QIU Jian; JIANG Chunning; YUE Ning; WANG Xiuqin; WANG Wanfu

    2007-01-01

    The leaf shapes of adult Populus euphratica vary from lanceolate to dentate broad-ovate.In order to find the mechanism regarding the ecological adaptation of the polymorphic leaves,the dentate broad-ovate,broad-ovate,and lanceolate leaves were chosen to study their stomatal and photosynthetic characteristics.It is observed that the stomas on the adaxial and abaxial epidermis of the same leaves open non-uniformly with similar densities.The stomatal densities are different among the three typical leaves,which decrease from broad-ovate to lanceolate leaves.Their stomatal sunken degree varied obviously,decreasing from broad-ovate to lanceolate leaves.The changes of the diurnal photosynthetic rate of the three typical leaves follow a single peak curve.The mean diurnal photosynthetic rates of these leaves rank from high to low as broad-ovate>dentate broad-ovate>lanceolate leaves.The light compensation points are similar in the three typical leaves,while the light saturation points vary obviously.The efficiency of solar energy conversion and potential activity of the PSⅡ in the leaves differ significantly,with the dentate broad-ovate leaves the highest.The results suggest that their leaf shapes,anatomic structures,and photosynthetic characteristics change during the leaf development.

  16. Comprehensive analysis of trihelix genes and their expression under biotic and abiotic stresses in Populus trichocarpa

    Science.gov (United States)

    Wang, Zhanchao; Liu, Quangang; Wang, Hanzeng; Zhang, Haizhen; Xu, Xuemei; Li, Chenghao; Yang, Chuanping

    2016-01-01

    Trihelix genes play important roles in plant growth and development and responses to biotic and abiotic stresses. Here, we identified 56 full-length trihelix genes in Populus trichocarpa and classified them into five groups. Most genes within a given group had similar gene structures and conserved motifs. The trihelix genes were unequally distributed across 19 different linkage groups. Fifteen paralogous pairs were identified, 14 of which have undergone segmental duplication events. Promoter cis-element analysis indicated that most trihelix genes contain stress- or phytohormone-related cis-elements. The expression profiles of the trihelix genes suggest that they are primarily expressed in leaves and roots. Quantitative real-time reverse transcription polymerase chain reaction analysis indicated that members of the trihelix gene family are significantly induced in response to osmotic, abscisic acid, salicylic acid, methyl jasmonate and pathogen infection. PtrGT10 was identified as a target gene of miR172d, which is involved in the osmotic response. Repression of PtrGT10 could increase reactive oxygen species scavenging ability and decrease cell death. This study provides novel insights into the phylogenetic relationships and functions of the P. trichocarpa trihelix genes, which will aid future functional studies investigating the divergent roles of trihelix genes belonging to other species. PMID:27782188

  17. Black Nuns as Educators.

    Science.gov (United States)

    Rector, Theresa A.

    1982-01-01

    Traces the contributions of Black Roman Catholic nuns to Black education in the United States since the early 1800s. Also shows that, despite declining membership, the three existing religious orders continue to be active in Black education and social change. (GC)

  18. Marketing for Black Alums.

    Science.gov (United States)

    Harris, Tracy A.

    1994-01-01

    Considers need for colleges and universities to develop effective marketing plan for recruitment of black students. Highlights advantages of designing marketing plan for recruitment of black alumni to assist in recruitment and retention of black students. Identifies key indicators that often hinder institutions in their recruitment of black…

  19. Increasing the productivity of biomass plantations of Populus species and hybrids in the Pacific Northwest. Final report, September 14, 1981--December 31, 1996

    Energy Technology Data Exchange (ETDEWEB)

    DeBell, D.S.; Harrington, C.A.; Clendenen, G.W. [USDA Forest Service, Olympia, WA (United States)] [and others

    1997-08-01

    This final report represents the culmination of eight years of biological research devoted to increasing the productivity of short rotation plantations of Populus trichocarpa and Populus hybrids in the Pacific Northwest. Studies described herein provide an understanding of tree growth, stand development and biomass yield at various spacings, and how patterns thereof differ by Populus clone in monoclonal and polyclonal plantings. Also included is some information about factors related to wind damage in Populus plantings, use of leaf size as a predictor of growth potential, and approaches for estimating tree and stand biomass and biomass growth. The work was accomplished in three research plantations, all established cooperatively with the Washington State Department of Natural Resources (DNR) and located at the DNR Tree Improvement Center near Olympia. The first plantation was established in Spring 1986 to evaluate the highly touted {open_quotes}woodgrass{close_quotes} concept and compare it with more conventional short-rotation management regimes, using two Populus hybrid clones planted at five spacings. Besides providing scientific data to resolve the politicized {open_quotes}wood-grass{close_quotes} dispute, this plantation has furnished excellent data on stand dynamics and woody biomass yield. A second plantation was established at the same time; groups of trees therein received two levels of irrigation and different amounts of four fertilizer amendments, resulting in microsites with diverse moisture and nutrient conditions.

  20. Effects of Cobalt Complexes on the Combustion Process of Cottonwood with Ammonium Polyphosphate Flame Retardant%钴配合物与聚磷酸铵对杨木协同阻燃的研究

    Institute of Scientific and Technical Information of China (English)

    袁利萍; 伍国云; 胡云楚

    2013-01-01

    The synergistic flame-retarded effects of a similar molecular sieve [Co5 (OH) 2 (tca) 2 (ina) 2 (H2O) 2]· 4 H2O (Co5) and ammonium polyphosphate(APP) on cottonwood was studied by cone calorimeter.The results showed that compared with APP added individually,the combination of Cos and APP was led to the reduction of total heat release(THR) to 18.3 %,the mass loss to 7.7 %,y(CO2) to 22.8 g/kg and y(CO) to 12.3 g/kg,respectively.The TGA and XRD analysis also showed that the generation of tricarballylic acid and isonicotinic acid ligands under high temperature.It can promote the decomposition of the APP and help to inhibit burning and lower the weightlessness rate.Thus,the flame retardancy of s-APP/Co5 was superior to s-APP.Co5 showed good effects on the APP flame retarded cottonwood.%研究了Co(NO3)2·6H2O与1,2,3-丙三酸(H3tca)、导烟酸(Hina)形成的类分子筛配合物[Co5(OH)2(tca)2 (ina)2(H2O)2],4H2O(简称为Co5)与聚磷酸铵(APP)对杨木的协同阻燃作用.锥形量热仪实验结果表明,Co5与APP协同阻燃试样的总热释放量(THR)比APP阻燃试样的THR降低了18.3%,燃烧过程的质量损失减少了7.7%,二氧化碳产率减少了22.8 g/kg,一氧化碳产率减少12.3 g/kg.结合热重分析(TGA)、X射线衍射(XRD),表明Co5或Co5在高温时产生的丙三酸(ri3tca)、异烟酸(Hina)配体等促进了APP的分解,有助于抑制燃烧,降低失重.APP/Co5对杨木的阻燃效果优于单一的APP.

  1. Stuffed Black Holes

    CERN Document Server

    Arbona, A; Carot, J; Mas, L; Massó, J; Stela, J

    1998-01-01

    Initial data corresponding to spacetimes containing black holes are considered in the time symmetric case. The solutions are obtained by matching across the apparent horizon different, conformally flat, spatial metrics. The exterior metric is the vacuum solution obtained by the well known conformal imaging method. The interior metric for every black hole is regular everywhere and corresponds to a positive energy density. The resulting matched solutions cover then the whole initial (Cauchy) hypersurface, without any singularity, and can be useful for numerical applications. The simpler cases of one black hole (Schwarzschild data) or two identical black holes (Misner data) are explicitly solved. A procedure for extending this construction to the multiple black hole case is also given, and it is shown to work for all time symmetric vacuum solutions obtained by the conformal imaging method. The numerical evolution of one such 'stuffed' black hole is compared with that of a pure vacuum or 'plain' black hole in the...

  2. Stem xylem resistance to cavitation is related to xylem structure but not to growth and water-use efficiency at the within-population level in Populus nigra L.

    Science.gov (United States)

    Guet, Justine; Fichot, Régis; Lédée, Camille; Laurans, Françoise; Cochard, Hervé; Delzon, Sylvain; Bastien, Catherine; Brignolas, Franck

    2015-08-01

    Xylem resistance to drought-induced cavitation is a key trait of plant water relations. This study assesses the genetic variation expressed for stem cavitation resistance within a population of a riparian species, the European black poplar (Populus nigra L.), and explores its relationships with xylem anatomy, water-use efficiency (WUE), and growth. Sixteen structural and physiological traits related to cavitation resistance, xylem anatomy, growth, bud phenology, and WUE were measured on 33 P. nigra genotypes grown under optimal irrigation in a 2-year-old clonal experiment in a nursery. Significant genetic variation was expressed for the xylem tension inducing 50% loss of hydraulic conductivity (Ψ50) within the studied population, as attested by the high value of broad-sense heritability estimated for this trait (H (2) ind = 0.72). Stem cavitation resistance was associated with xylem structure: the more cavitation-resistant genotypes exhibited lower hydraulic efficiency and higher mechanical reinforcement as assessed from stem xylem cross sections. By contrast, Ψ50 was not significantly related to shoot height increment, total above-ground dry mass, or bulk leaf carbon isotope discrimination, a proxy for intrinsic WUE. These findings indicate that the trade-offs between xylem resistance to cavitation, hydraulic efficiency, and mechanical reinforcement can occur at the within-population level. Given that the studied genotypes were exposed to the same environmental conditions and evolutionary drivers in situ, the trade-offs detected at this scale are expected to reflect true functional relationships.

  3. A genomics investigation of partitioning into and among flavonoid-derived condensed tannins for carbon sequestration in Populus

    Energy Technology Data Exchange (ETDEWEB)

    Harding, Scott, A; Tsai, Chung-jui; Lindroth, Richard, L

    2013-03-24

    The project set out to use comparative (genotype and treatment) and transgenic approaches to investigate the determinants of condensed tannin (CT) accrual and chemical variability in Populus. CT type and amount are thought to effect the decomposition of plant detritus in the soil, and thereby the sequestering of carbon in the soil. The stated objectives were: 1. Genome-wide transcriptome profiling (microarrays) to analyze structural gene, transcription factor and metabolite control of CT partitioning; 2. Transcriptomic (microarray) and chemical analysis of ontogenetic effects on CT and PG partitioning; and 3. Transgenic manipulation of flavonoid biosynthetic pathway genes to modify the control of CT composition. Objective 1: A number of approaches for perturbing CT content and chemistry were tested in Objective 1, and those included nitrogen deficit, leaf wounding, drought, and salicylic acid spraying. Drought had little effect on CTs in the genotypes we used. Plants exhibited unpredictability in their response to salicylic acid spraying, leading us to abandon its use. Reduced plant nitrogen status and leaf wounding caused reproducible and magnitudinally striking increases in leaf CT content. Microarray submissions to NCBI from those experiments are the following: GSE ID 14515: Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979. Public on Jan 04, 2010; Contributor(s) Harding SA, Tsai C GSE ID 14893: Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200. Public on Feb 19, 2009; Contributor(s) Harding SA, Tsai C GSE ID 16783 Wound-induced gene expression changes in Populus: 1 week; clone RM5. Status Public on Dec 01, 2009; Contributor(s) Harding SA, Tsai C GSE ID 16785 Wound-induced gene expression changes in Populus: 90 hours; clone RM5 Status Public on Dec 01, 2009; Contributor(s) Harding SA, Tsai C Although CT amount changed in response to treatments, CT composition was essentially

  4. Characteristics of the stem sap flux of Populus euphratica in the lower reaches of the Heihe River Basin,Northwest China

    Institute of Scientific and Technical Information of China (English)

    XiaoYou Zhang; JianHua Si

    2009-01-01

    Populus euphratica trees are the sole natural perennial riparian woodlands native to the river oases in the lower reaches of Heihe River Basin in northwestern China. This study investigated characteristics of the stem sap flux of Populus euphratica and its relationship to environmental factors using the thermal dissipation probe (TDP) method. The results showed that (1) daily variation of sap flow of P .euphratica on clear days exhibited an obvious unimodal curve; sap flow rates in June, July, August ,and September were 13.39, 12.07, 12.69, and 5.10 L/d, respectively; (2) the average transpiration of the Populus euphratica from June through Ceptember amounted to 1,309.84 L; (3) stem sap flow can be affected by a number of environmental factors that, in terms of the influential degree, can be arranged in the descending order of air temperature, soil moisture, relative humidity, total solar radiation,soil temperature, and wind velocity.

  5. Nutrient Dynamics of Fine Roots in the Mixed Plantation of Poplar and Black Locust

    Institute of Scientific and Technical Information of China (English)

    Zhai Mingpu; Jiang Sannai; Jia Liming

    2006-01-01

    The mixed plantation of poplar (Populus spp.)and black locust (Robinia pseudoacacia) is one of the typical mixed stands with nitrogen-fixing and non-nitrogen-fixing species.Interaction between the two species in the mixed stand is harmonious and productivity is high,making this kind of mixed plantation a very successful pattern on poor sandy sites in north China.In this study,the fine root decomposition of the two species was investigated in the mixed plantation of 27-year-old Canadian poplar (P.canadansis)and 22-year-old black locust on sandy sites along the Chaobai River in Beijing.Mechanism of harmonious interaction between the two species was observed in the view of the nutrient cycle of fine roots.Results showed that:(1) the fine root decomposition of Canadian poplar and black locust trees was different.Concentrations of N,Ca and Mg gradually increased and those of P and K gradually decreased in the fine roots of poplar during the period of decomposition.Concentrations of N,P and K gradually decreased in the fine roots of black locust during decomposition.The speed of nutrient decomposition in mixed fine roots of the two species fell between the speed of the two pure samples.(2) During decomposition,the annual return amount of N,K and Mg in fine roots of black locust was highest,followed by the mixed fine roots of the two species,and then the fine roots of poplar.(3) The increased return amount of N in mixed fine roots could improve the N nutrient condition of poplar trees.The return amount of P in poplar Fine roots was greater than that of black locust,which could improve the P nutrient of black locust trees.The interaction of mutual supplements of N and P nutrient cycle of fine roots between these two species formed.

  6. CHANGES OF CUTICLE SURFACE LIPIDS OF POPULUS ITALICA AND BETULA PENDULA CAUSED BY POLLUTION

    Directory of Open Access Journals (Sweden)

    O. M. Zubrovskaya

    2014-08-01

    Full Text Available Arboreal plants intensively accumulate heavy metals, resulting in a corresponding revocation level of physiological processes. The lipid components operate an important role in the formation of plant resistance. Therefore, it was very important to determine the characteristics of lipid peroxidation flow in leaves of arboreal plants, and changes in the composition of cuticle surface lipids at different levels of heavy metal accumulation. Research objects were Populus italica (Du Roi Moench and Betula pendula Roth. of second age group, growing on the industrial site РJSC ‘Kryvyi Rig Factory of minium’ (with strong contamination and in the arboretum of Kryvyi Rig Botanic Garden, National Academy of Science of Ukraine (conventional control. Leaves were taken from the middle of the crown southwest exposure in phase of leaf full separation and 5-10 day of phase finishing point of their growth. It was shown that P. italica maximally accumulated zinc, content of which was increased in the phase of leaf full separation and on 5-10 day of phase of leaf growth finishing point relative to the control to 12,6 and 23 times respectively. The accumulation level of heavy metals was typically less significant for assimilation organs of B. pendula compared to P. italica. Thus, the content of zinc and lead in the leaves during the study increased only in 2 times towards control. The leaves of B. pendula, unlike P. italica, more intensively accumulated cadmium in the phase of leaf full separation and on 5-10 day of phase finishing point of their growth (it was 6 and 15 times higher relative to control respectively. It was obviously connected to the fact that the surface texture of poplar leaves may cause intense sticking of dust particles containing heavy metals and penetration into the leaves. The effect of heavy metals in both phases of leaf morphogenesis caused an increase in lipid peroxidation by 40-52% for P. italica and almost by 3 times for B

  7. Response of Coarse Root Distribution of Populus euphratica Oliv. to Soil Moisture in Extreme Arid Region China

    OpenAIRE

    Li, Jianlin; Feng, Qi; SI, Jianhua; CHANG, Zongqiang; Wang, Yan

    2010-01-01

    Generally root systems of tree are divided into coarse root system and fine root system. As well as fine root system, coarse root system is important to well growth of tree too. Based on the data observed at Ejina Banner Inner Mongolia Autonomous Region, China from May to July of 2006, using fractal theory and statistical method, the relationship between coarse root system distribution of Populus euphratica Oliv. and soil moisture in root zone was analyzed. Root system of tree has a typical f...

  8. Isolation of protoplast from callus of Populus euphratica and H+ fluxes across plasma membrane under NaCl stress

    Institute of Scientific and Technical Information of China (English)

    Gao Zhun; Dai Song-xiang; Chen Shao-liang; Shen Xin; Wang Rui-gang

    2007-01-01

    We used callus of Populus euphratica Olive to isolate protoplasts, and H+ fluxes across plasma membrane were investigated. The concentration of enzymes for protoplast isolation, e.g. cellulase, pectolyase, macerozyme, hemicellulase, and sorbitol content, incubation time were systemically studied. High yield and viability of protoplast was achieved after 6-8 hours incubation of P. euphratica callus in enzyme solution containing 1.5% (w:v) cellulase R-10, 0.1% (w:v) pectolyase Y-23, 0.2% (w:v) macerozyme membrane of P. euphratica cells. The shift of H+ flux response to NaCl shock and the relevance to salt tolerance were discussed.

  9. Effect of tree-crop intercropping on a young Populus tomentosa plantation

    Institute of Scientific and Technical Information of China (English)

    JIANG Yuezhong; QIN Guanghua

    2007-01-01

    In order to study the effect of tree crop intercropping on a young plantation ofPopulus tomentosa in the plains along the Yellow River,field experiments were conducted by observing the growth of the plantation,the nutrient content in leaves,the nutrient and water content in the soil,and the output of crops.The relationship between forest growth and nutrient content in the tree leaves and the soil were analyzed.Results show that tree crop intercropping in young plantations can not only improve soil water content,but also enhance the contents of organic matter and the available nitrogen,phosphorus and potassium in soil resulting in the vigorous growth of the individual trees.Diameter at breast height (DBH) was positively related to the contents of organic matter in the soil,and the contents of N,P and K in the tree leaves had correlation coefficients of 0.967,0.955,0.988 and 0.972,respectively.Whole tree leaf area,crown width,number of branches and the mean length of branches in the intercropped plantation (intercropped with watermelon and vegetables,peanut and winter wheat,and soybean) were,respectively,1.70-3.0 times,2.22-2.47 times,1.0-1.41 times and 1.70-2.32 times of those of CK (without intercropping).Diameter at breast height (DBH) and tree height in the intercropped plantation were 50.5%-136.7% and 27%-59.5% higher than those of the CK,respectively.The study also showed that intercropping with watermelon and vegetables proved to have the highest economic return among the treatments adopted.Tree crop intercropping in young plantations is an effective measure to increase forest growth and economic benefit.

  10. Genetic variations and miRNA-target interactions contribute to natural phenotypic variations in Populus.

    Science.gov (United States)

    Chen, Jinhui; Xie, Jianbo; Chen, Beibei; Quan, Mingyang; Li, Ying; Li, Bailian; Zhang, Deqiang

    2016-10-01

    Variation in regulatory factors, including microRNAs (miRNAs), contributes to variation in quantitative and complex traits. However, in plants, variants in miRNAs and their target genes that contribute to natural phenotypic variation, and the underlying regulatory networks, remain poorly characterized. We investigated the associations and interactions of single-nucleotide polymorphisms (SNPs) in miRNAs and their target genes with phenotypes in 435 individuals from a natural population of Populus. We used RNA-seq to identify 217 miRNAs differentially expressed in a tension wood system, and identified 1196 candidate target genes; degradome sequencing confirmed 60 of the target sites. In addition, 72 miRNA-target pairs showed significant co-expression. Gene ontology (GO) term analysis showed that most of the genes in the co-regulated pairs participate in biological regulation. Genome resequencing found 5383 common SNPs (frequency ≥ 0.05) in 139 miRNAs and 31 037 SNPs in 819 target genes. Single-SNP association analyses identified 232 significant associations between wood traits (P ≤ 0.05) and SNPs in 102 miRNAs and 1387 associations with 478 target genes. Among these, 102 miRNA-target pairs associated with the same traits. Multi-SNP associations found 102 epistatic pairs associated with traits. Furthermore, a reconstructed regulatory network contained 12 significantly co-expressed pairs, including eight miRNAs and nine targets associated with traits. Lastly, both expression and genetic association showed that miR156i, miR156j, miR396a and miR6445b were involved in the formation of tension wood. This study shows that variants in miRNAs and target genes contribute to natural phenotypic variation and annotated roles and interactions of miRNAs and their target genes by genetic association analysis. PMID:27265357

  11. Sex-specific responses of Populus yunnanensis exposed to elevated CO{sub 2} and salinity

    Energy Technology Data Exchange (ETDEWEB)

    Ling Li; Yuanbin Zhang; Chunyang Li [Chinese Academy of Sciences. Chengdu Institute of Biology, Chengdu (Switzerland); Jianxun Luo, Sichuan Academy of Forestry, Chengdu (Switzerland)); Korpelainen, H. [Univ. of Helsinki. Dept. of Agricultural Sciences, Helsinki (Finland)

    2013-04-15

    Populus yunnanensis Dode., a native dioecious woody plant in southwestern China, was employed as a model species to study sex-specific morphological, physiological and biochemical responses to elevated CO{sub 2} and salinity. To investigate the effects of elevated CO{sub 2}, salinity and their combination, the cuttings were exposed to two CO{sub 2} regimes (ambient CO{sub 2} and double ambient CO{sub 2}) and two salt treatments in growth chambers. Males exhibited greater downregulation of net photosynthesis rate (A{sub net}) and carboxylation efficiency (CE) than females at elevated CO{sub 2}, whereas these sexual differences were lessened under salt stress. On the other hand, salinity induced a higher decrease in Anet and CE, more growth inhibition and leaf Cl{sup -} accumulation and more damage to cell organelles in females than in males, whereas the sexual differences in photosynthesis and growth were lessened at elevated CO{sub 2}. Moreover, elevated CO{sub 2} exacerbated membrane lipid peroxidation and organelle damage in females but not in males under salt stress. Our results indicated that: (1) females are more sensitive and suffer from greater negative effects than do males under salt stress, and elevated CO{sub 2} lessens the sexual differences in photosynthesis and growth under salt stress; (2) elevated CO{sub 2} tends to aggravate the negative effects of salinity in females; and (3) sex-specific reactions under the combination of elevated CO{sub 2} and salinity are distinct from single-stress responses. Therefore, these results provide evidence for different adaptive responses between plants of different sexes exposed to elevated CO{sub 2} and salinity. (Author)

  12. Energy dynamics in Populus deltoides G{sub 3} Marsh agroforestry systems in eastern India

    Energy Technology Data Exchange (ETDEWEB)

    Chaturvedi, O.P. [National Research Centre for Agroforestry, Jhansi (India); Das, D.K. [Rajendra Agricultural Univ., Dept. of Forestry, Bihar (India)

    2005-08-01

    Energy efficiency of Populus deltoides G{sub 3} Marsh agroforestry of a 3-year-old system with intercropping of maize-wheat in crop I and pigeonpea in crop II and of a 9-year-old system with turmeric, a shade loving crop was studied at Pusa, Bihar in eastern India. Energy fixation, storage, net allocation in agronomic yield and energy released and exit from the 9-year-old system was 1.53, 4.30, 0.43 and 3.37 times in crop I and 1.67, 4.60, 0.53 and 3.30 times in crop II of the 3-year-old agroforestry system. The energy conservation efficiency in the 9-year-old system was higher (1.91%) as compared to crop I (1.24%) and crop II (1.15%) of the 3-year-old agroforestry system. The energy accumulation ratio in the 9-year-old system was 2.82 and 2.77 times higher in crop I and crop II, respectively, of the 3-year-old agroforestry system. The 3-year-old agroforestry system showed lower energy accumulation ratio resulting from less energy accumulation in perennial turnover in the form of leaf of tree and agricultural crops. The crop II system of the 3-year-old poplar agroforestry was more efficient system of management due to higher quanta of energy and higher cash return but one has to opt for shade loving intercrop turmeric with increase in age of the poplar plantation and more canopy closure. (Author)

  13. Genome anchored QTLs for biomass productivity in Hybrid Populus: Heterosis and detection across Contrasting Environments.

    Energy Technology Data Exchange (ETDEWEB)

    Muchero, Wellington [ORNL; Sewell, Mitchell [ORNL; Gunter, Lee E [ORNL; Tschaplinski, Timothy J [ORNL; Yin, Tongming [ORNL; DiFazio, Steven P [West Virginia University; Tuskan, Gerald A [ORNL

    2013-01-01

    Traits related to biomass production were analyzed for the presence of quantitative trait loci (QTLs) in an interspecific F2 population derived from an outbred Populus trichocarpa P. deltoides parental cross. Three years of phenotypic data for stem growth traits (height and diameter) were collected from two parental, two F1 and 339 F2 trees in a clonal trial replicated both within and among two environmentally contrasting sites in the North American Pacific Northwest. A genetic linkage map comprised of 841 SSR, AFLP, and RAPD markers and phenotypic data from 310 progeny were used to identify genomic regions harboring QTL using the Multiple-QTL Model (MQM) package of the statistical program MapQTL 6. A total of twelve QTLs, nine putative and three suggestive, were identified with eight of these being identified at both sites in at least one experiment. Of these, three putative QTL BM-1, BM-2, BM-7, on LGs I, II, and XIV, respectively, were identified in all three years for both height and diameter. Two QTLs BM-2 and BM-7, on LG II and XIV, respectively, exhibited significant evidence of over-dominance in all three years for both traits. Conversely a QTL on BM-6 LG XIII exhibited out-breeding depression in two years for both height and diameter. The remaining nine QTLs showed difference levels of dominance and additive effects. Seven of the nine QTL were successfully anchored and QTL peak positions were estimated for each one on the P. trichocarpa genome assembly using flanking SSR markers with known physical positions positions. QTL BM-7 on LG XIV had been anchored on the genome assembly in a previous study, therefore eight QTLs identified in this study were assigned genome assembly positions. Physical distances encompassed by each QTL regions ranged from 1.3 to 8.8 Mb.

  14. The applications of populus fiber in removal of Cr(VI) from aqueous solution

    Science.gov (United States)

    Li, Miaomiao; Gong, Yumei; Lyu, Aichao; Liu, Yuanfa; Zhang, Hong

    2016-10-01

    The surface modification of natural materials to be applied in removal of Cr(VI) from aqueous solutions has attracted much attention. A natural sorbent for Cr(VI) based on natural populus fibers (PF) is prepared by transforming the cyano groups (AN) in polyacrylonitriles (PAN) grafted from PF into amidoxime groups (AO), which has strong ability to attract and chelate heavy metal ions. The prepared sorbent is characterized by Fourier Transform Infrared Spectra (FT-IR), thermogravimetric analysis (TGA), solid-state nuclear magnetic resonance (13C NMR) and scanning electron microscope (SEM). As potassium dichromate solution (K2Cr2O7) is used as a target solution for detecting adsorption capacity of the sorbent, the adsorption kinetics of the sorbent for chromiun is consistent with the pseudo-second-order kinetic model by analyzing the adsorption amount as a function of the sorbent dispersed duration in solution at pH = 2. The expected adsorption mechanism is that the Cr(VI) in anionic ions Cr2O72- and HCrO4- are adsorbed through electrostatic attraction but when Cr(VI) is reduced to Cr(III) by AO, the electronegative nitrogen and oxygen in AO chelate it through coordination bond. The as-prepared PF derivant with high adsorption efficiency of chromium 180.5 mg/g (3.47 mmol/g), low cost, reusability and greenly preparation process suggests that the development of natural PF as a sorbent in removal of Cr(VI) from aqueous solutions is a destined significant approach.

  15. Sex-specific responses of Populus deltoides to Glomus intraradices colonization and Cd pollution.

    Science.gov (United States)

    Chen, Lianghua; Zhang, Danju; Yang, Wanqin; Liu, Yang; Zhang, Li; Gao, Shun

    2016-07-01

    The positive effects of arbuscular mycorrhizal fungi (AM) on the survival, growth and physiology of plants under various stress conditions have been widely recognized. However, whether sex-dependent susceptibility to AM colonization exists, which can induce a differential tolerance between the sexes to stress conditions, is still unclear. In this study, we investigated the effects of Glomus intraradices on Cd-stressed males and females of Populus deltoides (spiked with 10 mg Cd per kg dry substrate) in terms of morphology, physiology, biochemistry, ultrastructure, and toxin storage and translocation. Exposure to Cd promoted the colonization by G. intraradices in males, but not in females. Generally, females suffered more impairments than males in response to Cd stress, reflected by leaf symptoms, the extent of lipid peroxidation, and integrity of the cellular ultrastructure, whether they were inoculated or not. Inoculation with G. intraradices alleviated the phytotoxic effects of Cd in females by stimulating antioxidant enzymes, decreasing levels of reactive oxygen species (ROS) and restricting Cd transfer to the shoots. In contrast, these beneficial effects induced by AM were not detected in mycorrhizal males compared to non-mycorrhizal males, based on thiobarbituric acid-reactive substances (TBARS) and cellular ultrastructure. Inoculation with AM promoted Cd accumulation in males but not in females, and caused the sequestration of more toxic Cd in the root systems in both sexes. Therefore, our results suggest that inoculated males of P. deltoides are suitable candidates for phytostabilization in Cd-polluted soils, due to their higher accumulation ability and greater tolerance relative to inoculated females.

  16. Sexual dimorphism floral microRNA profiling and target gene expression in andromonoecious poplar (Populus tomentosa.

    Directory of Open Access Journals (Sweden)

    Yuepeng Song

    Full Text Available Although the molecular basis of poplar sex-specific flower development remains largely unknown, increasing evidence indicates an essential role for microRNAs (miRNAs. The specific miRNA types and precise miRNA expression patterns in dioecious plant flower development remain unclear. Here, we used andromonoecious poplar, an exceptional model system, to eliminate the confounding effects of genetic background of dioecious plants. This system, combined with high-throughput sequencing and computational analysis, allowed us to characterize sex-specific miRNAomes from female and male flowers. Comparative miRNAome analysis combined with quantitative real-time PCR revealed the expression patterns of 27 miRNAs in poplar flower and showed that the targets of these miRNAs are involved in flower organogenesis, Ca(2+ transport, phytohormone synthesis and metabolism, and DNA methylation. This paper describes a complex regulatory network consisting of these miRNAs expressed in sex-specific flower development in a dioecious plant. The conserved and novel miRNA locations were annotated in the Populus trichocarpa genome. Among these, miRNA Pto-F70 and 4 targets are located in the sex-determination regions of chromosome XIX. Furthermore, two novel miRNAs, Pto-F47 and Pto-F68, were shown for the first time to be regulatory factors in phytohormone interactions. To our knowledge, this report is the first systematic investigation of sex-specific flower-related miRNAs and their targets in poplar, and it deepens our understanding of the important regulatory functions of miRNAs in female and male flower development in this dioecious plant.

  17. Nitrate and Ammonium Contribute to the Distinct Nitrogen Metabolism of Populus simonii during Moderate Salt Stress.

    Science.gov (United States)

    Meng, Sen; Su, Li; Li, Yiming; Wang, Yinjuan; Zhang, Chunxia; Zhao, Zhong

    2016-01-01

    Soil salinity is a major abiotic stressor affecting plant growth. Salinity affects nitrification and ammonification in the soil, however, limited information is available on the influence of different N sources on N metabolism during salt stress. To understand the N metabolism changes in response to different N sources during moderate salt stress, we investigated N uptake, assimilation and the transcript abundance of associated genes in Populus simonii seedlings treated with moderate salt stress (75mM NaCl) under hydroponic culture conditions with nitrate (NO3-) or ammonium (NH4+). Salt stress negatively affected plant growth in both NH4+-fed and NO3--fed plants. Both NH4+ uptake and the total N concentration were significantly increased in the roots of the NH4+-fed plants during salt stress. However, the NO3- uptake and nitrate reductase (NR) and nitrite reductase (NiR) activity primarily depended on the NO3- supply and was not influenced by salt stress. Salt stress decreased glutamine synthetase (GS) and glutamate synthase (GOGAT) activity in the roots and leaves. Most genes associated with NO3-uptake, reduction and N metabolism were down-regulated or remained unchanged; while two NH4+ transporter genes closely associated with NH4+ uptake (AMT1;2 and AMT1;6) were up-regulated in response to salt stress in the NH4+-fed plants. The accumulation of different amino acid compounds was observed in the NH4+- and NO3-- fed plants during salt treatment. The results suggested that N metabolism in P. simonii plants exposed to salt enhanced salt resistance in the plants that were fed with NO3- instead of NH4+ as the sole N source. PMID:26950941

  18. Responses of germination and radicle growth of two Populus species to water potential and salinity

    Institute of Scientific and Technical Information of China (English)

    Li Li; Zhang Xi-ming; Michael Runge; Li Xiao-ming; He Xing-yuan

    2006-01-01

    The effects of water potential, NaCl and Na2SO4 on germination and radicle growth of two riparian tree species, Populus euphratica Oliv. and P. pruinosa Schrenk (Salicaceae), were tested. Growth chamber studies revealed an optimum temperature range for seed germination of both species between 15-35℃. The final germination percentage of both species decreases with decreasing water potential in all types of solution applied in the experiments. P. pruinosa was less tolerant to low Ψw stress than P. euphratica,especially in salt solutions. Germination percentages fell below 20% for P. pruinosa at -0.6 MPa (NaCl) or -0.4 MPa (Na2SO4) and for P. euphratica at -1.2 MPa (NaCl) or -0.6 MPa (Na2SO4). Radicle growth of both species was inhibited by high concentrations of PEG, NaCl and Na2SO4. However, growth was enhanced at -0.13 and -0.29 MPa in PEG or at -0.13 MPa in NaCl solutions compared to distilled water. Radicle growth of P. euphratica was higher than that of P. pruinosa. Germination and radicle growth of both species exhibited ion toxicity. Na2SO4 was more toxic than iso-osmotic solutions of NaCl. Radicle growth proved to be more sensitive than seed germination. Thus, flooding does not only yield the necessary soil moisture for germination but also favors seedling establishment of both species through leaching of salts from the soil surface. The different sensitivity of the species during their early growth stages might, moreover, contribute to the observed differences in their distribution in the Talim Basin (northwest China).

  19. Biomass accumulation and soil nitrogen availability in an 87-year-old Populus grandidentata chronosequence

    Science.gov (United States)

    White, L.L.; Zak, D.R.; Barnes, B.V.

    2004-01-01

    The Upper Lake States region is marked by major disturbances of fire and logging over 100 years ago that created a landscape mosaic of early successional forests. Given the intimate link between soil N availability and forest growth in this region, it is important to understand how temporal changes in soil N constrain the rate at which forest biomass accumulates following a stand-destroying disturbance. Bigtooth aspen (Populus grandidentata Michx.) currently dominates sites where primarily old-growth pine-hemlock-oak forests once thrived, which provides an opportunity to observe nearly 100 years of succession following severe disturbance. In this study, we examine the relationship between soil N availability and biomass accrual in a series of plots undergoing secondary succession following logging and burning. Our results demonstrate that total aboveground biomass and nitrogen accrual patterns are strongly and positively related on a highly disturbed, bigtooth aspen-dominated ecosystem in northern Lower Michigan. Nitrogen mineralization and nitrification were highest immediately following disturbance, and then decreased over the next approximately 20 years of succession. Following this short-term decrease, these processes increased and attained a maximum value after 70 years of forest succession. Understory biomass accumulation showed the opposite trend of nutrient availability, with highest values during the first 20 years of succession, followed by a dramatic decrease for the next 70 years. Understory biomass began to decrease as plants grew into the overstory or died. Total aboveground biomass was correlated with N mineralization (r=0.894; P=0.041) and nitrification (r=0.782; P=0.118) and appears to be increasing steadily to some maximum that has not yet been reached. ?? 2003 Elsevier B.V. All rights reserved.

  20. The role of antioxidant system in freezing acclimation-induced freezing resistance of Populus suaveolens cuttings

    Institute of Scientific and Technical Information of China (English)

    Luo Lei; Lin Shan-zhi; Zheng Hui-quan; Lei Yang; Zhang Qian; Zhang Zhi-yi

    2007-01-01

    We investigated the changes in the contents of H2O2, malonaldehyde (MDA) and endogenous antioxidants, the activities of protective enzymes and some critical enzymes involved in the ascorbate-glutathione (ASA-GSH) cycle as well as freezing resistance(expressed as LT50) and correlations mentioned above, in detail using Populus suaveolens cuttings. The purpose was to explore the physiological mechanism of the enhancement of freezing resistance induced by freezing acclimation at -20℃, and to elucidate the physiological mechanisms by which trees adapt to freezing. The results showed that freezing acclimation enhanced the activities of superoxide dismutase (SOD), peroxidase (POD), catalase (CAT), monodehydroascorbate reductase (MDAR), ascorbate peroxidase(APX), dehydroascorbate reductase (DHAR) and glutathione reductase (GR). And it increased the contents of reduced ascorbate(ASA), reduced glutathione (GSH), dehydroascorbate (DHA) and oxidized glutathione (GSSG). However, H2O2 and MDA contents and LT50 of cuttings were decreased. LT50 in cuttings was found to be closely correlated to the levels of SOD, POD, CAT, APX,DHAR, MDAR, GR, H2O2, MDA, ASA, GSH, DHA and GSSG during freezing acclimation. This suggested that the enhancement of freezing resistance of cuttings induced by freezing acclimation may relate to the distinct increase for the levels of SOD, POD, CAT,APX, DHAR, MDAR,GR,ASA, GSH, DHA, and GSSG. In addition, the observed levels of APX, DHAR, MDAR, GR, ASA, DHA,GSH and GSSG were higher than those of SOD, POD and CAT during freezing acclimation. It indicated that a higher capacity of the ASA-GSH cycle is required for H2O2 detoxification, and growth and development of cuttings. Based on the obtained results, it can be concluded that the ASA-GSH cycle plays an important role in enhancement of freezing resistance of P. suaveolens cuttings during freezing acclimation.

  1. 中菏1号杨树上无柄三毛孢的首次报道%The First Report of Robillarda sessilis on Populus deltoides‘Zhong He 1 ’

    Institute of Scientific and Technical Information of China (English)

    赵桂华; 杨鹤同; 赵楠; 李超

    2014-01-01

    In order to study a fungal diversity on Populus deltoides ‘Zhong He 1 ’ , sap wood tissues were plated and incubated on PDA in July 2009.After purified culturing of the endophytic fungus JSNL 1104 strain, this fun-gus was identified as Robillarda sessilis by using both morphological characters and molecular biological technique . It characterized by pycnidial black , ostiole central , 293.4~616.5 μm ×261.3~464.6 μm, conidiophore ab-sent, conidiogenous cells enteroblastic , phialidic, 7.3~9.2μm ×3.2~4.0μm.2-cells, hyaline, 10.4~12.8μm ×2.4~2.8 μm, and with 2~3 apical appendages.The host range of this fungus indicated that P.deltoides‘Zhong He 1’ is a new host and it is the first report of this fungus on Populus.%为了研究中菏1号杨树上的真菌,2009年7月,对杨木边材进行了组织分离,得到了内生菌JSNL1104菌株。通过纯化培养,采用形态特征和分子生物技术相结合的方法对该菌进行了比对,鉴定为无柄三毛孢,它的孢子器黑色,有孔口,293.4~616.5μm ×261.3~464.6μm。分生孢子梗缺。产孢细胞瓶梗状,7.3~9.2μm ×3.2~4.0μm。分生孢子双细胞,无色,10.4~12.8μm ×2.4~2.8μm,顶端具有2~3根附属丝。根据该菌的寄主范围,确认中菏1号杨树是无柄三毛孢的新寄主。此菌在杨树上属于首次报道。

  2. Stimulated Black Hole Evaporation

    CERN Document Server

    Spaans, Marco

    2016-01-01

    Black holes are extreme expressions of gravity. Their existence is predicted by Einstein's theory of general relativity and is supported by observations. Black holes obey quantum mechanics and evaporate spontaneously. Here it is shown that a mass rate $R_f\\sim 3\\times 10^{-8} (M_0/M)^{1/2}$ $M_0$ yr$^{-1}$ onto the horizon of a black hole with mass $M$ (in units of solar mass $M_0$) stimulates a black hole into rapid evaporation. Specifically, $\\sim 3 M_0$ black holes can emit a large fraction of their mass, and explode, in $M/R_f \\sim 3\\times 10^7 (M/M_0)^{3/2}$ yr. These stimulated black holes radiate a spectral line power $P \\sim 2\\times 10^{39} (M_0/M)^{1/2}$ erg s$^{-1}$, at a wavelength $\\lambda \\sim 3\\times 10^5 (M/M_0)$ cm. This prediction can be observationally verified.

  3. Extremal Hairy Black Holes

    CERN Document Server

    Gonzalez, P A; Saavedra, Joel; Vasquez, Yerko

    2014-01-01

    We consider a gravitating system consisting of a scalar field minimally coupled to gravity with a self-interacting potential and an U(1) electromagnetic field. Solving the coupled Einstein-Maxwell-scalar system we find exact hairy charged black hole solutions with the scalar field regular everywhere. We go to the zero temperature limit and we study the effect of the scalar field on the near horizon geometry of an extremal black hole. We find that except a critical value of the charge of the black hole there is also a critical value of the charge of the scalar field beyond of which the extremal black hole is destabilized. We study the thermodynamics of these solutions and we find that if the space is flat then at low temperature the Reissner-Nordstr\\"om black hole is thermodynamically preferred, while if the space is AdS the hairy charged black hole is thermodynamically preferred at low temperature.

  4. Astrophysical black holes

    CERN Document Server

    Gorini, Vittorio; Moschella, Ugo; Treves, Aldo; Colpi, Monica

    2016-01-01

    Based on graduate school lectures in contemporary relativity and gravitational physics, this book gives a complete and unified picture of the present status of theoretical and observational properties of astrophysical black holes. The chapters are written by internationally recognized specialists. They cover general theoretical aspects of black hole astrophysics, the theory of accretion and ejection of gas and jets, stellar-sized black holes observed in the Milky Way, the formation and evolution of supermassive black holes in galactic centers and quasars as well as their influence on the dynamics in galactic nuclei. The final chapter addresses analytical relativity of black holes supporting theoretical understanding of the coalescence of black holes as well as being of great relevance in identifying gravitational wave signals. With its introductory chapters the book is aimed at advanced graduate and post-graduate students, but it will also be useful for specialists.

  5. Cosmic Black Holes

    OpenAIRE

    Ahn, Eun-Joo; Cavaglia, Marco

    2003-01-01

    Production of high-energy gravitational objects is a common feature of gravitational theories. The primordial universe is a natural setting for the creation of black holes and other nonperturbative gravitational entities. Cosmic black holes can be used to probe physical properties of the very early universe which would usually require the knowledge of the theory of quantum gravity. They may be the only tool to explore thermalisation of the early universe. Whereas the creation of cosmic black ...

  6. The New Black

    OpenAIRE

    Lettman-Hicks, Sharon

    2014-01-01

    The New Black is a documentary that tells the story of how the African American community is grappling with the gay rights issue in light of the recent gay marriage movement and the fight over Civil Rights. The film documents activities, families and clergy on both sides of the campaign to legalize gay marriage and examines homophobia in the Black community's institutional pillar, the Black church, and reveals the Christian right wing's strategy of exploiting this phenomenon in order to pursu...

  7. Perturbations around black holes

    CERN Document Server

    Wang, B

    2005-01-01

    Perturbations around black holes have been an intriguing topic in the last few decades. They are particularly important today, since they relate to the gravitational wave observations which may provide the unique fingerprint of black holes' existence. Besides the astrophysical interest, theoretically perturbations around black holes can be used as testing grounds to examine the proposed AdS/CFT and dS/CFT correspondence.

  8. Black Branes as Piezoelectrics

    CERN Document Server

    Armas, Jay; Obers, Niels A

    2012-01-01

    We find a realization of linear electroelasticity theory in gravitational physics by uncovering a new response coefficient of charged black branes, exhibiting their piezoelectric behavior. Taking charged dilatonic black strings as an example and using the blackfold approach we measure their elastic and piezolectric moduli. We also use our results to draw predictions about the equilibrium condition of charged dilatonic black rings in dimensions higher than six.

  9. Black branes as piezoelectrics.

    Science.gov (United States)

    Armas, Jay; Gath, Jakob; Obers, Niels A

    2012-12-14

    We find a realization of linear electroelasticity theory in gravitational physics by uncovering a new response coefficient of charged black branes, exhibiting their piezoelectric behavior. Taking charged dilatonic black strings as an example and using the blackfold approach we measure their elastic and piezolectric moduli. We also use our results to draw predictions about the equilibrium condition of charged dilatonic black rings in dimensions higher than six. PMID:23368298

  10. Ten shades of black

    CERN Document Server

    Hod, Shahar

    2015-01-01

    The holographic principle has taught us that, as far as their entropy content is concerned, black holes in $(3+1)$-dimensional curved spacetimes behave as ordinary thermodynamic systems in flat $(2+1)$-dimensional spacetimes. In this essay we point out that the opposite behavior can also be observed in black-hole physics. To show this we study the quantum Hawking evaporation of near-extremal Reissner-Nordstr\\"om black holes. We first point out that the black-hole radiation spectrum departs from the familiar radiation spectrum of genuine $(3+1)$-dimensional perfect black-body emitters. In particular, the would be black-body thermal spectrum is distorted by the curvature potential which surrounds the black hole and effectively blocks the emission of low-energy quanta. Taking into account the energy-dependent gray-body factors which quantify the imprint of passage of the emitted radiation quanta through the black-hole curvature potential, we reveal that the $(3+1)$-dimensional black holes effectively behave as p...

  11. Evidence for black holes.

    Science.gov (United States)

    Begelman, Mitchell C

    2003-06-20

    Black holes are common objects in the universe. Each galaxy contains large numbers-perhaps millions-of stellar-mass black holes, each the remnant of a massive star. In addition, nearly every galaxy contains a supermassive black hole at its center, with a mass ranging from millions to billions of solar masses. This review discusses the demographics of black holes, the ways in which they interact with their environment, factors that may regulate their formation and growth, and progress toward determining whether these objects really warp spacetime as predicted by the general theory of relativity. PMID:12817138

  12. Asymptotic Black Holes

    CERN Document Server

    Ho, Pei-Ming

    2016-01-01

    Following earlier works on the KMY model of black-hole formation and evaporation, we construct the metric for a matter sphere in gravitational collapse, with the back-reaction of pre-Hawking radiation taken into consideration. The mass distribution and collapsing velocity of the matter sphere are allowed to have an arbitrary radial dependence. We find that a generic gravitational collapse asymptote to a universal configuration which resembles a black hole but without horizon. This approach clarifies several misunderstandings about black-hole formation and evaporation, and provides a new model for black-hole-like objects in the universe.

  13. Black stain - a review.

    Science.gov (United States)

    Ronay, Valerie; Attin, Thomas

    2011-01-01

    The purpose of this review was to summarise the fundamentals about black stain, its diagnosis and possible differential diagnoses as well as its microbiology and therapy. In addition, various studies investigating the relationship between black stain and dental caries are examined. Many studies report lower caries prevalence in children with black stain, but this finding could not be confirmed by all authors. Also, a negative relation between degree of staining and caries severity has been described. Reasons for these results are not yet clear but it was speculated that they are related to the specific oral microflora described in black stain-affected individuals. PMID:21594205

  14. A Black Hole Levitron

    CERN Document Server

    Arsiwalla, Xerxes D

    2009-01-01

    We study the problem of spatially stabilising four dimensional extremal black holes in background electric/magnetic fields. Whilst looking for stationary stable solutions describing black holes kept in external fields we find that taking a continuum limit of Denef et al's multi-center solutions provides a supergravity description of such backgrounds within which a black hole can be trapped in a given volume. This is realised by levitating a black hole over a magnetic dipole base. We comment on how such a construction resembles a mechanical Levitron.

  15. Deforming regular black holes

    CERN Document Server

    Neves, J C S

    2015-01-01

    In this work, we have deformed regular black holes which possess a general mass term described by a function which generalizes the Bardeen and Hayward mass terms. Using linear constraints in the energy-momentum tensor, the solutions are either regular or singular. That is, with this approach, it is possible to generate singular black holes from regular black holes and vice versa. Moreover, contrary to the Bardeen and Hayward regular solutions, the regular deformed metrics may violate the weak energy condition despite the presence of the spherical symmetry. Some comments on accretion of deformed black holes in cosmological scenarios are made.

  16. Genome-wide analysis and heavy metal-induced expression profiling of the HMA gene family in Populus trichocarpa

    Directory of Open Access Journals (Sweden)

    Dandan eLi

    2015-12-01

    Full Text Available The heavy metal ATPase (HMA family plays an important role in transition metal transport in plants. However, this gene family has not been extensively studied in Populus trichocarpa. We identified 17 HMA genes in P. trichocarpa (PtHMAs, of which PtHMA1–PtHMA4 belonged to the zinc (Zn/cobalt (Co/cadmium (Cd/lead (Pb subgroup, and PtHMA5–PtHMA8 were members of the copper (Cu/silver (Ag subgroup. Most of the genes were localized to chromosomes I and III. Gene structure, gene chromosomal location, and synteny analyses of PtHMAs indicated that tandem and segmental duplications likely contributed to the expansion and evolution of the PtHMAs. Most of the HMA genes contained abiotic stress-related cis-elements. Tissue-specific expression of PtHMA genes showed that PtHMA1 and PtHMA4 had relatively high expression levels in the leaves, whereas Cu/Ag subgroup (PtHMA5.1- PtHMA8 genes were upregulated in the roots. High concentrations of Cu, Ag, Zn, Cd, Co, Pb and Mn differentially regulated the expression of PtHMAs in various tissues. The preliminary results of the present study generated basic information on the HMA family of Populus that may serve as foundation for future functional studies.

  17. Moderate drought did not affect the effectiveness of ethylenediurea (EDU) in protecting Populus cathayana from ambient ozone.

    Science.gov (United States)

    Xin, Yue; Yuan, Xiangyang; Shang, Bo; Manning, William J; Yang, Aizhen; Wang, Younian; Feng, Zhaozhong

    2016-11-01

    A field study was conducted to evaluate the effects of ambient ozone (O3) on an O3-sensitive poplar (Populus cathayana) by using ethylenediurea (EDU) as a chemical protectant under two soil water treatments (well-watered (WW) and moderate drought (MD, 50-60% of WW in volumetric soil water content). EDU was applied as foliar spray at 0, 300, 450, and 600ppm. Photosynthetic parameters, pigment contents, leaf nitrogen, antioxidant capacity, growth, and biomass were measured. The 8h (9:00-17:00) average ambient O3 concentration was 71.7ppb, and AOT40 was 29.2ppmh during the experimental period (9 June to 21 September), which was high enough to cause plant injury. MD had significantly negative effects on P. cathayana, as indicated by reduced photosynthesis, growth, and biomass, and higher MDA contents. On the other hand, EDU significantly increased photosynthesis rate, chlorophyll a fluorescence, Vcmax and Jmax, photosynthetic pigments, total antioxidant capacity, tree growth and biomass accumulation, and reduced lipid peroxidation, but there was no significant interaction between EDU and drought for most parameters, indicating that EDU can efficiently protect Populus cathayana against ambient O3 and the protection was not affected by soil water contents when soil water reached moderate drought level. Among all doses, EDU at 450ppm provided maximum protection. Comparison of EDU-treated and non-treated P. cathayana could be used as a biomarker system in risk assessment of the effects of ambient O3 on forest health. PMID:27424114

  18. Populus nigra (Salicaceae) absolute rich in phenolic acids, phenylpropanoïds and flavonoids as a new potent tyrosinase inhibitor.

    Science.gov (United States)

    Maack, A; Pegard, A

    2016-06-01

    The purpose of this study was to evaluate the tyrosinase inhibitory capacity of Populus nigra buds absolute (PBA) and compare it to kojic acid (KA), controversial reference tyrosinase inhibitor. Populus nigra buds were extracted with hexane and ethanol to obtain PBA. The inhibitory effect of this absolute was first tested on the mushroom Agaricus bisporus tyrosinase. Then the depigmenting potential of PBA was tested on B16F10 murine melanocytes by assaying the activity of tyrosinase and melanin content. Consecutively, a microscopic analysis of intracellular melanin granules was performed. Finally, melanised reconstructed human epidermis (RHE) were used to assess the lightening potential activity of this PBA on human skin. Results show that PBA inhibits A. bisporus tyrosinase (IC50=77±8ppm) and inhibits melanocytes B16F10 tyrosinase (IC50=27±1ppm). PBA decreases intracellular melanin levels, with 50% loss at 39±9ppm. Finally, PBA at 1000ppm lightens RHE and decreases their melanin content of 20%. PBA is a strong inhibitor of tyrosinase and reduces melanogenesis in melanocytes B16F10. Thus, PBA has potential applications in skin-lightening cosmetics. PMID:27091790

  19. Morpho-physiological response of Populus alba to erythromycin: A timeline of the health status of the plant.

    Science.gov (United States)

    Pierattini, Erika Carla; Francini, Alessandra; Raffaelli, Andrea; Sebastiani, Luca

    2016-11-01

    Populus alba Villafranca clone was chosen for a proof of concept study to determine the potential uptake and accumulation of antibiotics by trees. Plants were grown hydroponically and irrigated with a recirculating Hoagland's nutrient solution (control) and Hoagland's nutrient solution fortified with erythromycin at 0.01, 0.1 and 1mgL(-1). After 3 and 28days of treatment, poplar plants were separated into roots, stem, and leaves. Plants showed good health all over the period of treatment, and no differences in poplar growth for all the concentrations of erythromycin tested were observed. Quantification of erythromycin was performed using liquid chromatography electrospray ionization tandem mass spectrometry (LC-MS/MS) in positive ion mode using multiple reaction ion monitoring. Erythromycin was detected in all organs analyzed. Roots showed an erythromycin concentration tenfold higher than leaves. The photochemical efficiency of photosystem II did not show a dose-dependant trend. From the quenching analysis of chlorophyll fluorescence, low nonphotochemical quenching (NPQ) and high photochemical quenching (qP) for the first week of erythromycin exposure was observed, depending on leaves position along the stem. Results suggest a short term adaptation of the photosynthetic apparatus of Populus alba in response to environmental realistic erythromycin concentrations. PMID:27366984

  20. Expression Patterns of ERF Genes Underlying Abiotic Stresses in Di-Haploid Populus simonii × P. nigra

    Directory of Open Access Journals (Sweden)

    Shengji Wang

    2014-01-01

    Full Text Available 176 ERF genes from Populus were identified by bioinformatics analysis, 13 of these in di-haploid Populus simonii × P. nigra were investigate by real-time RT-PCR, the results demonstrated that 13 ERF genes were highly responsive to salt stress, drought stress and ABA treatment, and all were expressed in root, stem, and leaf tissues, whereas their expression levels were markedly different in the various tissues. In roots, PthERF99, 110, 119, and 168 were primarily downregulated under drought and ABA treatment but were specifically upregulated under high salt condition. Interestingly, in poplar stems, all ERF genes showed the similar trends in expression in response to NaCl stress, drought stress, and ABA treatment, indicating that they may not play either specific or unique roles in stems in abiotic stress responses. In poplar leaves, PthERF168 was highly induced by ABA treatment, but was suppressed by high salinity and drought stresses, implying that PthERF168 participated in the ABA signaling pathway. The results of this study indicated that ERF genes could play essential but distinct roles in various plant tissues in response to different environment cues and hormonal treatment.

  1. Genome-wide search for segregation distortion loci associated with the expression of complex traits in Populus tomentosa

    Institute of Scientific and Technical Information of China (English)

    Zhang De-qiang; Zhang Zhi-yi; Yang Kai

    2007-01-01

    Segregation distortion of molecular markers has been reported in a broad range of organisms. It has been detected in an interspecific BC1 Populus pedigree established by controlled crossing between clone "LM50" (Populus tomentosa) and its hybrid clone "TB01" (P. tomentosa×P. bolleana). The study with a total of 150 AFLP markers (approximately 18.9% of the total loci)exhibited significant deviation from the Mendelian ratio (1:1) (p<0.01). Twenty-five percent of the markers were mapped on the parental specific genetic linkage maps of clones "LM50" and "TB01" with a pseudo-test-cross mapping strategy. Twelve linkage groups had markers with skewed segregation ratios, but the major regions were on linkage groups TLG2, TLG4 and TLG6 in the linkage map of clone "LM50". We also analyzed the association between distorted loci and expression of complex traits with Mapmaker/QTL software. A total of 16 putative QTLs affecting 12 traits were identified in the distorted regions on seven linkage groups.Therefore we could detect the distribution of skewed loci along the entire genome and identify the association between quantitative traits and segregation loci via genetic mapping in an interspecific BC1 P. tomentosa family. Furthermore, the genetic nature and possible causes of these segregation distortions for differentiation between female and male parents were also discussed.

  2. Black holes and beyond

    International Nuclear Information System (INIS)

    Belief in the existence of black holes is the ultimate act of faith for a physicist. First suggested by the English clergyman John Michell in the year 1784, the gravitational pull of a black hole is so strong that nothing - not even light - can escape. Gravity might be the weakest of the fundamental forces but black-hole physics is not for the faint-hearted. Black holes present obvious problems for would-be observers because they cannot, by definition, be seen with conventional telescopes - although before the end of the decade gravitational-wave detectors should be able to study collisions between black holes. Until then astronomers can only infer the existence of a black hole from its gravitational influence on other matter, or from the X-rays emitted by gas and dust as they are dragged into the black hole. However, once this material passes through the 'event horizon' that surrounds the black hole, we will never see it again - not even with X-ray specs. Despite these observational problems, most physicists and astronomers believe that black holes do exist. Small black holes a few kilometres across are thought to form when stars weighing more than about two solar masses collapse under the weight of their own gravity, while supermassive black holes weighing millions of solar masses appear to be present at the centre of most galaxies. Moreover, some brave physicists have proposed ways to make black holes - or at least event horizons - in the laboratory. The basic idea behind these 'artificial black holes' is not to compress a large amount of mass into a small volume, but to reduce the speed of light in a moving medium to less than the speed of the medium and so create an event horizon. The parallels with real black holes are not exact but the experiments could shed new light on a variety of phenomena. The first challenge, however, is to get money for the research. One year on from a high-profile meeting on artificial black holes in London, for instance, the UK

  3. Evolution of massive black holes

    OpenAIRE

    Volonteri, Marta

    2007-01-01

    Supermassive black holes are nowadays believed to reside in most local galaxies. Accretion of gas and black hole mergers play a fundamental role in determining the two parameters defining a black hole: mass and spin. I briefly review here some of the physical processes that are conducive to the evolution of the massive black hole population. I'll discuss black hole formation processes that are likely to place at early cosmic epochs, and how massive black hole evolve in a hierarchical Universe...

  4. Elevated Rocky Mountain elk numbers prevent positive effects of fire on quaking aspen (Populus tremuloides) recruitment

    Science.gov (United States)

    Smith, David Solance; Fettig, Stephen M.; Bowker, Matthew A.

    2016-01-01

    Quaking aspen (Populus tremuloides) is the most widespread tree species in North America and has supported a unique ecosystem for tens of thousands of years, yet is currently threatened by dramatic loss and possible local extinctions. While multiple factors such as climate change and fire suppression are thought to contribute to aspen’s decline, increased browsing by elk (Cervus elaphus), which have experienced dramatic population increases in the last ∼80 years, may severely inhibit aspen growth and regeneration. Fires are known to favor aspen recovery, but in the last several decades the spatial scale and intensity of wildfires has greatly increased, with poorly understood ramifications for aspen growth. Here, focusing on the 2000 Cerro Grande fire in central New Mexico – one of the earliest fires described as a “mega-fire” - we use three methods to examine the impact of elk browsing on aspen regeneration after a mega-fire. First, we use an exclosure experiment to show that aspen growing in the absence of elk were 3× taller than trees growing in the presence of elk. Further, aspen that were both protected from elk and experienced burning were 8.5× taller than unburned trees growing in the presence of elk, suggesting that the combination of release from herbivores and stimulation from fire creates the largest aspen growth rates. Second, using surveys at the landscape level, we found a correlation between elk browsing intensity and aspen height, such that where elk browsing was highest, aspen were shortest. This relationship between elk browsing intensity and aspen height was stronger in burned (r = −0.53) compared to unburned (r = −0.24) areas. Third, in conjunction with the landscape-level surveys, we identified possible natural refugia, microsites containing downed logs, shrubs etc. that may inhibit elk browsing by physically blocking aspen from elk or by impeding elk’s ability to move through the forest patch. We did not find any

  5. Transcriptome responses to aluminum stress in roots of aspen (Populus tremula

    Directory of Open Access Journals (Sweden)

    Grisel Nadine

    2010-08-01

    Full Text Available Abstract Background Ionic aluminum (mainly Al3+ is rhizotoxic and can be present in acid soils at concentrations high enough to inhibit root growth. Many forest tree species grow naturally in acid soils and often tolerate high concentrations of Al. Previously, we have shown that aspen (Populus tremula releases citrate and oxalate from roots in response to Al exposure. To obtain further insights into the root responses of aspen to Al, we investigated root gene expression at Al conditions that inhibit root growth. Results Treatment of the aspen roots with 500 μM Al induced a strong inhibition of root growth within 6 h of exposure time. The root growth subsequently recovered, reaching growth rates comparable to that of control plants. Changes in gene expression were determined after 6 h, 2 d, and 10 d of Al exposure. Replicated transcriptome analyses using the Affymetrix poplar genome array revealed a total of 175 significantly up-regulated and 69 down-regulated genes, of which 70% could be annotated based on Arabidopsis genome resources. Between 6 h and 2 d, the number of responsive genes strongly decreased from 202 to 26, and then the number of changes remained low. The responses after 6 h were characterized by genes involved in cell wall modification, ion transport, and oxidative stress. Two genes with prolonged induction were closely related to the Arabidopsis Al tolerance genes ALS3 (for Al sensitive 3 and MATE (for multidrug and toxin efflux protein, mediating citrate efflux. Patterns of expression in different plant organs and in response to Al indicated that the two aspen genes are homologs of the Arabidopsis ALS3 and MATE. Conclusion Exposure of aspen roots to Al results in a rapid inhibition of root growth and a large change in root gene expression. The subsequent root growth recovery and the concomitant reduction in the number of responsive genes presumably reflect the success of the roots in activating Al tolerance mechanisms. The

  6. UHPLC-ESI/TOFMS determination of salicylate-like phenolic gycosides in Populus tremula leaves.

    Science.gov (United States)

    Abreu, Ilka Nacif; Ahnlund, Maria; Moritz, Thomas; Albrectsen, Benedicte Riber

    2011-08-01

    Associations of salicylate-like phenolic glycosides (PGs) with biological activity have been reported in Salix and Populus trees, but only for a few compounds, and in relation to a limited number of herbivores. By considering the full diversity of PGs, we may improve our ability to recognize genotypes or chemotype groups and enhance our understanding of their ecological function. Here, we present a fast and efficient general method for salicylate determination in leaves of Eurasian aspen that uses ultra-high performance liquid chromatography-electrospray ionization/time-of-flight mass spectrometry (UHPLC-ESI/TOFMS). The time required for the liquid chromatography separations was 13.5 min per sample, compared to around 60 min per sample for most HPLC protocols. In leaf samples from identical P. tremula genotypes with diverse propagation and treatment histories, we identified nine PGs. We found the compound-specific mass chromatograms to be more informative than the UV-visible chromatograms for compound identification and when quantitating samples with large variability in PG content. Signature compounds previously reported for P. tremoloides (tremulacin, tremuloidin, salicin, and salicortin) always were present, and five PGs (2'-O-cinnamoyl-salicortin, 2'-O-acetyl-salicortin, 2'-O-acetyl-salicin, acetyl-tremulacin, and salicyloyl-salicin) were detected for the first time in P. tremula. By using information about the formic acid adduct that appeared for PGs in the LTQ-Orbitrap MS environment, novel compounds like acetyl-tremulacin could be tentatively identified without the use of standards. The novel PGs were consistently either present in genotypes regardless of propagation and damage treatment or were not detectable. In some genotypes, concentrations of 2'-O-acetyl-salicortin and 2'-O-cinnamoyl-salicortin were similar to levels of biologically active PGs in other Salicaceous trees. Our study suggests that we may expect a wide variation in PG content in aspen

  7. Characterization and Role of Glucose-6-phosphate Dehydrogenase of Populus suaveolens in Induction of Freezing Resistance

    Institute of Scientific and Technical Information of China (English)

    Lin Yuanzhen; Guo Huan; Liu Wenfeng; Lin Shanzhi; Zhang Qian; Hu Dongmei; Zhu Baoqing; Zhang Zhiyi

    2004-01-01

    Glucose-6-phosphate dehydrogenase (G6PDH, EC 1.1.1.49) was purified from the leaves of 8-week-old Populus suaveolens cuttings. The enzyme activity in the absence and presence of reduced dithiothreitol (DTTred) was determined. The results show that the G6PDH activity is not inactivated by pre-incubation with DTTred, indicating that the purified enzyme probably presented in cytosol of P. suaveolens. The catalytic characteristics and kinetic parameters of cytosolic G6PDH purified from P. suaveolens cuttings were also studied. The results show that G6PDH is characterized by Km value of 360 (mol·L-1 for G6P and 16 (mol·L-1 for NADP, a pH range of 7.3-8.9, and the maximum activity around pH 8.2. The enzyme activity is inhibited by various metabolites such as NADPH, NADH, GTP, UTP, ATP, AMP, ADP, CoA, acetyl CoA, fructose-6-phosphate (F6P), erythrose-4-phosphate (E4P), ribose-5-phosphate (R5P) and 3-phosphoglycerate (3-PG) (all at 1 mmol·L-1 except for NADPH and NADH) to different extents. NADPH is the most effective inhibitor of enzyme activity, with an inhibition of 72.0%. The addition of metal ions such as MgCl2, CaCl2 and KCl (all 1.0 mmol·L-1) to the standard reaction mixture has no remarkable influence on the cytosolic G6PDH activity. However, CdCl2 (1.0 mmol·L-1) causes high inhibitory effect on the enzyme activity. To explore the role of G6PDH on the enhancement of freezing resistance induced by freezing acclimation, the changes in the cytosolic G6PDH activity and freezing resistance (expressed as LT50) of P. suaveolens cuttings during freezing acclimation at -20 °C were investigated. The results reveal that freezing acclimation decreases LT50 of cuttings, and increases the activity of cytosolic G6PDH compared with control ones, while 2 d of de-acclimation at 25 °C result in a decrease in cytosolic G6PDH activity, and caused an increase in LT50. Furthermore, the change in cytosolic G6PDH activity is found to be closely correlated to the degree of freezing

  8. CHANGES OF CUTICLE SURFACE LIPIDS OF POPULUS ITALICA AND BETULA PENDULA CAUSED BY POLLUTION

    Directory of Open Access Journals (Sweden)

    Zubrovskaya O. M.

    2014-08-01

    Full Text Available Arboreal plants intensively accumulate heavy metals, resulting in a corresponding revocation level of physiological processes. The lipid components operate an important role in the formation of plant resistance. Therefore, it was very important to determine the characteristics of lipid peroxidation flow in leaves of arboreal plants, and changes in the composition of cuticle surface lipids at different levels of heavy metal accumulation. Research objects were Populus italica (Du Roi Moench and Betula pendula Roth. of second age group, growing on the industrial site РJSC ‘Kryvyi Rig Factory of minium’ (with strong contamination and in the arboretum of Kryvyi Rig Botanic Garden, National Academy of Science of Ukraine (conventional control. Leaves were taken from the middle of the crown southwest exposure in phase of leaf full separation and 5-10 day of phase finishing point of their growth. It was shown that P. italica maximally accumulated zinc, content of which was increased in the phase of leaf full separation and on 5-10 day of phase of leaf growth finishing point relative to the control to 12,6 and 23 times respectively. The accumulation level of heavy metals was typically less significant for assimilation organs of B. pendula compared to P. italica. Thus, the content of zinc and lead in the leaves during the study increased only in 2 times towards control. The leaves of B. pendula, unlike P. italica, more intensively accumulated cadmium in the phase of leaf full separation and on 5-10 day of phase finishing point of their growth (it was 6 and 15 times higher relative to control respectively. It was obviously connected to the fact that the surface texture of poplar leaves may cause intense sticking of dust particles containing heavy metals and penetration into the leaves. The effect of heavy metals in both phases of leaf morphogenesis caused an increase in lipid peroxidation by 40-52% for P. italica and almost by 3 times for B. pendula

  9. Comparative Study on Antioxidative System in Normal and Vitrified Shoots of Populus suaveolens in Tissue Culture

    Institute of Scientific and Technical Information of China (English)

    Lin Shanzhi; Zhang Zhiyi; Lin Yuanzhen; Liu Wenfeng; Guo Huan; Zhang Wei; Zhang Chong

    2004-01-01

    To explore the physiological and biochemical mechanism of the occurrence of vitrified shoots of Populus suaveolens in tissue culture, the changes in water, chlorphyll, lignin, H2O2, phenylalanine ammonialyase (PAL), malonaldehyde (MDA), protective enzymatic systems, and some key enzymes involved in the ascorbate- glutathione cycle were comparatively studied in both normal and vitrified shoots of P. Suaveolens. The results show that the lower activities of peroxidase (POD), catalase (CAT), ascorbate peroxidase (APX), dehydroascorbate reductase (DHAR), glutathione reductase (GR) and PAL, and the less contents of chlorphyll, lignin, ascorbate (ASA) and reduced glutathione (GSH) as well as the lower ratios of ASA / DHA and GSH / GSSG are observed in vitrified shoots than in normal ones during the whole culture period. While in comparison with normal shoots, the higher activity of superoxide dismutase (SOD) and the more concentrations of water, H2O2, MDA, dehydroascorbate (DHA) and oxidized glutathione (GSSG) are found in vitrified shoots. Statistical analysis indicates that the enhanced activity of SOD and the decreased activities of CAT and POD as well as some enzymes involved in the ascorbate-glutathione cycle might be closely correlated to the accumulation of H2O2. The less regeneration of ASA and GSH and the lower capacity of the ascorbate-glutathione cycle observed in vitrified shoots might be due to a significant decrease in APX, MDAR, DHAR and GR activities and a decline in redox status of ASA and GSH. The decreases in chlorphyll content might result in a decline in photosynthesis. The lower activities of POD and PAL could result in the decrease of lignin synthesis and cell wall ligination, which might be the key factor leading to the increase in water content. It is concluded that the deficiency of detoxification capacity caused by the lower capacity of the ascorbate-glutathione pathway and the decreased activity of protective enzymatic system might lead to the

  10. The UDP-glucuronate decarboxylase gene family in Populus: structure, expression, and association genetics.

    Directory of Open Access Journals (Sweden)

    Qingzhang Du

    Full Text Available In woody crop plants, the oligosaccharide components of the cell wall are essential for important traits such as bioenergy content, growth, and structural wood properties. UDP-glucuronate decarboxylase (UXS is a key enzyme in the synthesis of UDP-xylose for the formation of xylans during cell wall biosynthesis. Here, we isolated a multigene family of seven members (PtUXS1-7 encoding UXS from Populus tomentosa, the first investigation of UXSs in a tree species. Analysis of gene structure and phylogeny showed that the PtUXS family could be divided into three groups (PtUXS1/4, PtUXS2/5, and PtUXS3/6/7, consistent with the tissue-specific expression patterns of each PtUXS. We further evaluated the functional consequences of nucleotide polymorphisms in PtUXS1. In total, 243 single-nucleotide polymorphisms (SNPs were identified, with a high frequency of SNPs (1/18 bp and nucleotide diversity (πT = 0.01033, θw = 0.01280. Linkage disequilibrium (LD analysis showed that LD did not extend over the entire gene (r (2<0.1, P<0.001, within 700 bp. SNP- and haplotype-based association analysis showed that nine SNPs (Q <0.10 and 12 haplotypes (P<0.05 were significantly associated with growth and wood property traits in the association population (426 individuals, with 2.70% to 12.37% of the phenotypic variation explained. Four significant single-marker associations (Q <0.10 were validated in a linkage mapping population of 1200 individuals. Also, RNA transcript accumulation varies among genotypic classes of SNP10 was further confirmed in the association population. This is the first comprehensive study of the UXS gene family in woody plants, and lays the foundation for genetic improvements of wood properties and growth in trees using genetic engineering or marker-assisted breeding.

  11. Carbon black recovery

    International Nuclear Information System (INIS)

    A process and apparatus for recovering carbon black from hot smoke which comprises passing the smoke through a cyclone separation zone following cooling, then through aggregate filter beds and regeneration of filter beds with clean off-gas which is recycled to the carbon black reaction zone as quench

  12. Black holes matter

    DEFF Research Database (Denmark)

    Kragh, Helge Stjernholm

    2016-01-01

    Review essay, Marcia Bartusiak, Black Hole: How an Idea Abandoned by Newtonians, Hated by Einstein, and Gambled On by Hawking Became Loved (New Haven: Yale University Press, 2015).......Review essay, Marcia Bartusiak, Black Hole: How an Idea Abandoned by Newtonians, Hated by Einstein, and Gambled On by Hawking Became Loved (New Haven: Yale University Press, 2015)....

  13. Scattering by Black Holes

    CERN Document Server

    Andersson, N

    2000-01-01

    This is a chapter on Black-hole Scattering that was commissioned for an Encyclopaedia on Scattering edited by Pike and Sabatier, to be published by Academic Press. The chapter surveys wave propagation in black-hole spacetimes, diffraction effects in wave scattering, resonances, quasinormal modes and related topics.

  14. Arbitrators, Blacks and Discipline

    Science.gov (United States)

    Jennings, Kenneth

    1975-01-01

    A discussion of the handling of disciplinary problems of black employees concludes that management should be concerned because of the effect that grievance resolution may have on the company's overall employee discipline program and the additional appeal alternatives available to the black employee. (Author/EA)

  15. Noncommutative Singular Black Holes

    International Nuclear Information System (INIS)

    In this paper, applying the method of coordinate coherent states to describe a noncommutative model of Vaidya black holes leads to an exact (t - r) dependence of solution in terms of the noncommutative parameter σ. In this setup, there is no black hole remnant at long times.

  16. Noncommutative Singular Black Holes

    Science.gov (United States)

    Hamid Mehdipour, S.

    2010-11-01

    In this paper, applying the method of coordinate coherent states to describe a noncommutative model of Vaidya black holes leads to an exact (t — r) dependence of solution in terms of the noncommutative parameter σ. In this setup, there is no black hole remnant at long times.

  17. Black Hole Dynamic Potentials

    Indian Academy of Sciences (India)

    Koustubh Ajit Kabe

    2012-09-01

    In the following paper, certain black hole dynamic potentials have been developed definitively on the lines of classical thermodynamics. These potentials have been refined in view of the small differences in the equations of the laws of black hole dynamics as given by Bekenstein and those of thermodynamics. Nine fundamental black hole dynamical relations have been developed akin to the four fundamental thermodynamic relations of Maxwell. The specific heats , and , have been defined. For a black hole, these quantities are negative. The d equation has been obtained as an application of these fundamental relations. Time reversible processes observing constancy of surface gravity are considered and an equation connecting the internal energy of the black hole , the additional available energy defined as the first free energy function , and the surface gravity , has been obtained. Finally as a further application of the fundamental relations, it has been proved for a homogeneous gravitational field in black hole space times or a de Sitter black hole that $C_{\\Omega,\\Phi}-C_{J,Q}=\\kappa \\left[\\left(\\dfrac{\\partial J}{\\partial \\kappa}\\right)_{\\Omega,\\Phi}\\left(\\dfrac{\\partial \\Omega}{\\partial \\kappa}\\right)_{J,Q}+\\left(\\dfrac{\\partial Q}{\\partial \\kappa}\\right)_{\\Omega,\\Phi}\\left(\\dfrac{\\partial\\Phi}{\\partial \\kappa}\\right)_{J,Q}\\right]$. This is dubbed as the homogeneous fluid approximation in context of the black holes.

  18. Black Craftsmen Through History.

    Science.gov (United States)

    Myers, Robin

    This report traces the evolution of the black craftsmen from ancient Egypt to the present. Special attention is given to the restricted use of black craftsmen under slavery, and the added problems they faced after being freed. Business and union discimination is described, along with recent government and private efforts to achieve equal…

  19. Fluctuating Black Hole Horizons

    CERN Document Server

    Mei, Jianwei

    2013-01-01

    In this paper we treat the black hole horizon as a physical boundary to the spacetime and study its dynamics following from the Gibbons-Hawking-York boundary term. Using the Kerr black hole as an example we derive an effective action that describes, in the large wave number limit, a massless Klein-Gordon field living on the average location of the boundary. Complete solutions can be found in the small rotation limit of the black hole. The formulation suggests that the boundary can be treated in the same way as any other matter contributions. In particular, the angular momentum of the boundary matches exactly with that of the black hole, suggesting an interesting possibility that all charges (including the entropy) of the black hole are carried by the boundary. Using this as input, we derive predictions on the Planck scale properties of the boundary.

  20. Lifshitz Topological Black Holes

    CERN Document Server

    Mann, R B

    2009-01-01

    I find a class of black hole solutions to a (3+1) dimensional theory gravity coupled to abelian gauge fields with negative cosmological constant that has been proposed as the dual theory to a Lifshitz theory describing critical phenomena in (2+1) dimensions. These black holes are all asymptotic to a Lifshitz fixed point geometry and depend on a single parameter that determines both their area (or size) and their charge. Most of the solutions are obtained numerically, but an exact solution is also obtained for a particular value of this parameter. The thermodynamic behaviour of large black holes is almost the same regardless of genus, but differs considerably for small black holes. Screening behaviour is exhibited in the dual theory for any genus, but the critical length at which it sets in is genus-dependent for small black holes.

  1. Spatial distribution of leaf morphological and physiological characteristics in relation to local radiation regime within the canopies of 3-year-old Populus clones in coppice culture.

    Science.gov (United States)

    Casella, E; Ceulemans, R

    2002-12-01

    Spatial distributions of leaf characteristics relevant to photosynthesis were compared within high-density coppice canopies of Populus spp. of contrasting genetic origin. We studied three clones representative of the range in growth potential, leaf morphology, coppice and canopy structure: Clone Hoogvorst (Hoo) (Populus trichocarpa Torr. & Gray x Populus deltoides Bartr. & Marsh), Clone Fritzi Pauley (Fri) (Populus trichocarpa Torr. & Gray) and Clone Wolterson (Wol) (Populus nigra L.). Leaf area index ranged from 2.7 (Fri and Wol) to 3.8 (Hoo). The clones exhibited large vertical variation in leaf area density (0.02-1.42 m2 m-3). Leaf dry mass per unit leaf area (DM(A)) increased with increasing light in Clones Hoo and Fri, from about 56 g m-2 at the bottom of the canopy to 162 g m-2 at the top. In Clone Wol, DM(A) varied only from 65 to 100 g m-2, with no consistent relationship with respect to light. Conversely, nitrogen concentration on a mass basis was nearly constant (around 1.3-2.1%) within the canopies of Clones Hoo and Fri, but increased strongly with light in Clone Wol, from 1.4% at the bottom of the canopy to 4.1% at the top. As a result, nitrogen per unit leaf area (N(A)) increased with light in the canopies of all clones, from 0.9 g m-2 at the bottom to 2.9 g m-2 at the top. Although a single linear relationship described the dependence of maximum carboxylation rate (17-93 micromol CO2 m-2 s-1) or electron transport capacity (45-186 micromol electrons m-2 s-1) on N(A), for all clones, Clone Wol differed from Clones Hoo and Fri by exhibiting a higher dark respiration rate at low N(A) (1.8 versus 0.8 micromol CO2 m-2 s-1).

  2. Black Youth Unemployment and the Black Family.

    Science.gov (United States)

    Hoskins, Linus A.

    This paper analyzes the results of a survey conducted to ascertain the attitudes of 400 employers, youth, and academic/community professionals in Los Angeles, Chicago and Washington, D.C., toward an approach to Black youth unemployment centered on the creation of jobs and training among minority businesses in selected metropolitan areas. Minority…

  3. Black Hole Critical Phenomena Without Black Holes

    CERN Document Server

    Liebling, S L

    2000-01-01

    Studying the threshold of black hole formation via numerical evolution has led to the discovery of fascinating nonlinear phenomena. Power-law mass scaling, aspects of universality, and self-similarity have now been found for a large variety of models. However, questions remain. Here I briefly review critical phenomena, discuss some recent results, and describe a model which demonstrates similar phenomena without gravity.

  4. On the Charter Question: Black Marxism and Black Nationalism

    Science.gov (United States)

    Stern, Mark; Hussain, Khuram

    2015-01-01

    This article brings two black intellectual traditions to bear on the question of charter schools: black Marxism and black nationalism. The authors examine the theoretical and rhetorical devices used to talk about charters schools by focusing on how notions of "black liberation" are deployed by the charter movement, and to what end. The…

  5. An efficient Agrobacterium-mediated transformation and regeneration system for leaf explants of two elite aspen hybrid clones Populus alba × P. berolinensis and Populus davidiana × P. bolleana.

    Science.gov (United States)

    Wang, Haihai; Wang, Cuiting; Liu, Hua; Tang, Renjie; Zhang, Hongxia

    2011-11-01

    Transgenic technology has been successfully used for gene function analyses and trait improvement in cereal plants. However, its usage is limited in woody plants, especially in the difficult-to-transform but commercially viable hybrid poplar. In this work, an efficient regeneration and transformation system was established for the production of two hybrid aspen clones: Populus alba × P. berolinensis and Populus davidiana × P. bolleana. A plant transformation vector designed to express the reporter gene uidA, encoding β-glucuronidase (GUS), driven by the cauliflower mosaic virus 35S promoter, was used to detect transformation event at early stages of plant regeneration, and to optimize the parameters that may affect poplar transformation efficiency. Bacterium strain and age of leaf explant are two major factors that affect transformation efficiency. Addition of thidiazuron (TDZ) improved both regeneration and transformation efficiency. The transformation efficiency is approximately 9.3% for P. alba × P. berolinensis and 16.4% for P. davidiana × P. bolleana. Using this system, transgenic plants were usually produced in less than 1 month after co-cultivation. The growth characteristics and morphology of transgenic plants were identical to the untransformed wild type plants, and the transgenes could be inherited by vegetative propagation, as confirmed by PCR, Southern blotting, RT-PCR and β-glucuronidase staining analyses. The establishment of this system will help to facilitate the studies of gene functions in tree growth and development at a genome level, and as well as the introduction of some valuable traits in aspen breeding. PMID:21717184

  6. Scalarized Hairy Black Holes

    CERN Document Server

    Kleihaus, Burkhard; Yazadjiev, Stoytcho

    2015-01-01

    In the presence of a complex scalar field scalar-tensor theory allows for scalarized rotating hairy black holes. We exhibit the domain of existence for these scalarized black holes, which is bounded by scalarized rotating boson stars and ordinary hairy black holes. We discuss the global properties of these solutions. Like their counterparts in general relativity, their angular momentum may exceed the Kerr bound, and their ergosurfaces may consist of a sphere and a ring, i.e., form an ergo-Saturn.

  7. Noncommutative Solitonic Black Hole

    CERN Document Server

    Chang-Young, Ee; Lee, Daeho; Lee, Youngone

    2012-01-01

    We investigate solitonic black hole solutions in three dimensional noncommutative spacetime. We do this in gravity with negative cosmological constant coupled to a scalar field using the Moyal product expanded up to first order in the noncommutativity parameter in the two noncommutative spatial directions. By numerical simulation we look for black hole solutions by increasing the non- commutativity parameter value starting from regular solutions with vanishing noncommutativity. We find that even a regular soliton solution in the commutative case becomes a black hole solution when the noncommutativity parameter reaches a certain value.

  8. Scalarized hairy black holes

    Energy Technology Data Exchange (ETDEWEB)

    Kleihaus, Burkhard, E-mail: b.kleihaus@uni-oldenburg.de [Institut für Physik, Universität Oldenburg, Postfach 2503, D-26111 Oldenburg (Germany); Kunz, Jutta [Institut für Physik, Universität Oldenburg, Postfach 2503, D-26111 Oldenburg (Germany); Yazadjiev, Stoytcho [Department of Theoretical Physics, Faculty of Physics, Sofia University, Sofia 1164 (Bulgaria)

    2015-05-11

    In the presence of a complex scalar field scalar–tensor theory allows for scalarized rotating hairy black holes. We exhibit the domain of existence for these scalarized black holes, which is bounded by scalarized rotating boson stars and hairy black holes of General Relativity. We discuss the global properties of these solutions. Like their counterparts in general relativity, their angular momentum may exceed the Kerr bound, and their ergosurfaces may consist of a sphere and a ring, i.e., form an ergo-Saturn.

  9. Scalarized hairy black holes

    Directory of Open Access Journals (Sweden)

    Burkhard Kleihaus

    2015-05-01

    Full Text Available In the presence of a complex scalar field scalar–tensor theory allows for scalarized rotating hairy black holes. We exhibit the domain of existence for these scalarized black holes, which is bounded by scalarized rotating boson stars and hairy black holes of General Relativity. We discuss the global properties of these solutions. Like their counterparts in general relativity, their angular momentum may exceed the Kerr bound, and their ergosurfaces may consist of a sphere and a ring, i.e., form an ergo-Saturn.

  10. Black holes new horizons

    CERN Document Server

    Hayward, Sean Alan

    2013-01-01

    Black holes, once just fascinating theoretical predictions of how gravity warps space-time according to Einstein's theory, are now generally accepted as astrophysical realities, formed by post-supernova collapse, or as supermassive black holes mysteriously found at the cores of most galaxies, powering active galactic nuclei, the most powerful objects in the universe. Theoretical understanding has progressed in recent decades with a wider realization that local concepts should characterize black holes, rather than the global concepts found in textbooks. In particular, notions such as trapping h

  11. Scalarized hairy black holes

    International Nuclear Information System (INIS)

    In the presence of a complex scalar field scalar–tensor theory allows for scalarized rotating hairy black holes. We exhibit the domain of existence for these scalarized black holes, which is bounded by scalarized rotating boson stars and hairy black holes of General Relativity. We discuss the global properties of these solutions. Like their counterparts in general relativity, their angular momentum may exceed the Kerr bound, and their ergosurfaces may consist of a sphere and a ring, i.e., form an ergo-Saturn

  12. The Price of "Black Dominance."

    Science.gov (United States)

    Hoberman, John

    2000-01-01

    Discusses the harmful effects of stereotyping black males as athletes, noting that over-identification with athletes and the world of physical performance limits black children's development by discouraging academic achievement. Examines the negative influence of mass media focus on black athletes, rappers, and stylized ghetto blackness. Discusses…

  13. On Noncommutative Black Holes Thermodynamics

    CERN Document Server

    Faizal, Mir; Ulhoa, S C

    2015-01-01

    In this paper, we will analyze noncommutative deformation of the Schwarzschild black holes and Kerr black holes. We will perform our analysis by relating the commutative and the noncommutative metrics using an Moyal product. We will also analyze the thermodynamics of these noncommutative black hole solutions. We will explicitly derive expression for the corrected entropy and temperature of these black hole solutions.

  14. The Thermodynamics of Black Holes

    Directory of Open Access Journals (Sweden)

    Wald Robert M.

    2001-01-01

    Full Text Available We review the present status of black hole thermodynamics. Our review includes discussion of classical black hole thermodynamics, Hawking radiation from black holes, the generalized second law, and the issue of entropy bounds. A brief survey also is given of approaches to the calculation of black hole entropy. We conclude with a discussion of some unresolved open issues.

  15. Influences of the Populus deltoids seedlings treated with exogenous methyl jasmonate on the growth and development of Lymantria dispar larvae

    Institute of Scientific and Technical Information of China (English)

    HU Zeng-hui; ZHAO Ling; YANG Di; SHEN Ying-bai; SHEN Fan-yi

    2006-01-01

    Lyantria dispar larvae were fed with the leaves of Populus deltoids seedlings exposed to methyl jasmonate (MeJA) for 24 h. The growth and development of the larvae were investigated, and phenolics contents in treated leaves including pyrocatechol, caffeic acid, coumarin, ferulic acid and benzoic acid were also surveyed by high-pressure liquid chromatography (HPLC). Results indicated that approximate digestibility, efficiency of conversion of ingested food, efficiency of conversion of digested food, and weight of the larvae were inhibited obviously, especially from the sixth day, which may result from the increase of total phenolics contents in treated leaves. This result provides strong supports for MeJA acting as the airborne signal molecule between woody plants.

  16. Effects of in vitro ozone treatment on proteolysis of purified rubisco from two hybrid poplar clones. [Populus maximowizii x trichocarpa

    Energy Technology Data Exchange (ETDEWEB)

    Landry, L.G.; Pell, E.J. (Pennsylvania State Univ., University Park (USA))

    1989-04-01

    Plants exposed to ozone (O{sub 3}) exhibited symptoms of premature senescence, including early decline in quantity of rubisco. O{sub 3}-induced oxidation may cause changes in protein conformation of rubisco, resulting in enhanced proteolysis. To test this hypothesis, rubisco was purified from two hybrid clones of Populus maximowizii x trichocarpa, clones 388 and 245, and treated in vitro with O{sub 3} or air. Rubisco was then challenged with bromelain, papain, chymotrypsin, carboxypeptidase A, or endoproteinase Glu-C and percent degradation measured by SDS-PAGE and densitometric scanning of the gels. Degree of rubisco sensitivity to oxidation may be related to available sulfhydryl (SH) groups on the protein. The number of SH groups in native and denatured rubisco was measured for purified rubisco of both clones by DTNB titration method. The relationship between sensitivity to proteolysis and number and availability of SH groups is discussed.

  17. Age Structure and Growth of Degraded Populus euphratica Floodplain Forests in North-west China and Perspectives for Their Recovery

    Institute of Scientific and Technical Information of China (English)

    Janneke Westermann; Stefan Zerbe; Dieter Eckstein

    2008-01-01

    The Populus euphratica floodplain forests along the lower reaches of the Tarim River in continental-arid Xinjiang (north-west China) have been declining in recent decades as a result of dam constructions and the withdrawal of water from the river. Since 2000, controlled flooding has been carried out to counteract this process of degradation. However, the consequences of a changing water regime for the floodplain ecosystem are not yet sufficiently investigated. In 2004 we sampled a total of 150 P. euphratica trees along two transects at the middle and lower reaches of the Tarim River to compare the age structure and growth of these two tree populations. The anthropogenic drawdown of the groundwater table had no effect on the average growth of the trees at the lower reaches. However, tree growth abruptly increased after controlled flooding, thus showing distinct signs of recovery.

  18. Construction and Characterization of cDNA Library from Water-Stressed Plantlets Regenerated in vitro of Populus hopeiensis

    Institute of Scientific and Technical Information of China (English)

    2005-01-01

    In order to isolate and clone water-stress-responsive genes, total RNA was extracted from water-stressed plantlets regenerated in vitro of Populus hopeiensis using a QIAGEN RNeasy Plant Mini Kit. CDNA, synthesized by LD-PCR with the SMART cDNA Library Construction Kit, was in vitro packaged into a phage λTriplEx2 vector. The resulting primary library and amplified library have a titer of 1.68×106 and 1.69×109 pfu·mL-1 respectively. The combination ratio reached 98.8% and the average size of inserts was about 800 bp. In addition, the percentage of inserted fragments (> 400 bp) was approximately 90%. The results indicate that a cDNA library has been successfully constructed.

  19. High Level Expression of Glucose-6-phosphate Dehydrogenase Gene PsG6PDH from Populus suaveolens in E. coli

    Institute of Scientific and Technical Information of China (English)

    2005-01-01

    In order to investigate the functions of the gene PsG6PDH and the mechanisms underlying freezing tolerance of Populus suaveolens, the recombinant expression vector pET-G (pET30a-G6PDH), which contained full encoding region of PsG6PDH gene, was established. The recombinant was identified by lawn-PCR and double enzyme digestion and then transformed into expression host XA90 and induced by isopropyl-a-D-thiogalactoside (IPTG) to express 100 kD polypeptide of G6PDH fusion protein. The results showed that the expressed amount of the fusion protein culminated after 1 mmol·L-1 IPTG treatment for 4 h and that pET-G product was predominately soluble and not extra-cellular secreting.

  20. Topics in black hole evaporation

    International Nuclear Information System (INIS)

    Two major aspects of particle creation by gravitational fields of black holes are studied: the neutrino emission from rotating black holes; and interactions between scalar particles emitted by a black hole. Neutrino emission is investigated under three topics: The asymmetry of the angular dependence of neutrino emission from rotating black holes; the production of a local matter excess by rotating black holes in a baryon symmetric universe; and cosmological magnetic field generation by neutrinos from evaporating black holes. Finally the author studies the effects of interactions on the black hole evaporation process

  1. Black Holes in Higher Dimensions

    International Nuclear Information System (INIS)

    In four space-time dimensions black holes of Einstein-Maxwell theory satisfy a number of theorems. In more than four space-time dimensions, however, some of the properties of black holes can change. In particular, uniqueness of black holes no longer holds. In five and more dimensions black rings arise. Thus in a certain region of the phase diagram there are three black objects with the same global charges present. Here we discuss properties of higher-dimensional vacuum and charged black holes, which possess a spherical horizon topology, and of vacuum and charged black rings, which have a ringlike horizon topology

  2. Towards a map of the Populus biomass protein-protein interaction network

    Energy Technology Data Exchange (ETDEWEB)

    Beers, Eric; Brunner, Amy; Helm, Richard; Dickerman, Allan

    2016-08-31

    Biofuels can be produced from a variety of plant feedstocks. The value of a particular feedstock for biofuels production depends in part on the degree of difficulty associated with the extraction of fermentable sugars from the plant biomass. The wood of trees is potentially a rich source fermentable sugars. However, the sugars in wood exist in a tightly cross-linked matrix of cellulose, hemicellulose, and lignin, making them largely recalcitrant to release and fermentation for biofuels production. Before breeders and genetic engineers can effectively develop plants with reduced recalcitrance to fermentation, it is necessary to gain a better understanding of the fundamental biology of the mechanisms responsible for wood formation. Regulatory, structural, and enzymatic proteins are required for the complicated process of wood formation. To function properly, proteins must interact with other proteins. Yet, very few of the protein-protein interactions necessary for wood formation are known. The main objectives of this project were to 1) identify new protein-protein interactions relevant to wood formation, and 2) perform in-depth characterizations of selected protein-protein interactions. To identify relevant protein-protein interactions, we cloned a set of approximately 400 genes that were highly expressed in the wood-forming tissue (known as secondary xylem) of poplar (Populus trichocarpa). We tested whether the proteins encoded by these biomass genes interacted with each other in a binary matrix design using the yeast two-hybrid (Y2H) method for protein-protein interaction discovery. We also tested a subset of the 400 biomass proteins for interactions with all proteins present in wood-forming tissue of poplar in a biomass library screen design using Y2H. Together, these two Y2H screens yielded over 270 interactions involving over 75 biomass proteins. For the second main objective we selected several interacting pairs or groups of interacting proteins for in

  3. Towards a map of the Populus biomass protein-protein interaction network

    Energy Technology Data Exchange (ETDEWEB)

    Beers, Eric [Virginia Polytechnic Inst. and State Univ. (Virginia Tech), Blacksburg, VA (United States); Brunner, Amy [Virginia Polytechnic Inst. and State Univ. (Virginia Tech), Blacksburg, VA (United States); Helm, Richard [Virginia Polytechnic Inst. and State Univ. (Virginia Tech), Blacksburg, VA (United States); Dickerman, Allan [Virginia Polytechnic Inst. and State Univ. (Virginia Tech), Blacksburg, VA (United States)

    2015-07-31

    Biofuels can be produced from a variety of plant feedstocks. The value of a particular feedstock for biofuels production depends in part on the degree of difficulty associated with the extraction of fermentable sugars from the plant biomass. The wood of trees is potentially a rich source fermentable sugars. However, the sugars in wood exist in a tightly cross-linked matrix of cellulose, hemicellulose, and lignin, making them largely recalcitrant to release and fermentation for biofuels production. Before breeders and genetic engineers can effectively develop plants with reduced recalcitrance to fermentation, it is necessary to gain a better understanding of the fundamental biology of the mechanisms responsible for wood formation. Regulatory, structural, and enzymatic proteins are required for the complicated process of wood formation. To function properly, proteins must interact with other proteins. Yet, very few of the protein-protein interactions necessary for wood formation are known. The main objectives of this project were to 1) identify new protein-protein interactions relevant to wood formation, and 2) perform in-depth characterizations of selected protein-protein interactions. To identify relevant protein-protein interactions, we cloned a set of approximately 400 genes that were highly expressed in the wood-forming tissue (known as secondary xylem) of poplar (Populus trichocarpa). We tested whether the proteins encoded by these biomass genes interacted with each other in a binary matrix design using the yeast two-hybrid (Y2H) method for protein-protein interaction discovery. We also tested a subset of the 400 biomass proteins for interactions with all proteins present in wood-forming tissue of poplar in a biomass library screen design using Y2H. Together, these two Y2H screens yielded over 270 interactions involving over 75 biomass proteins. For the second main objective we selected several interacting pairs or groups of interacting proteins for in

  4. Genome-Wide Analysis of MicroRNA Responses to the Phytohormone Abscisic Acid in Populus euphratica.

    Science.gov (United States)

    Duan, Hui; Lu, Xin; Lian, Conglong; An, Yi; Xia, Xinli; Yin, Weilun

    2016-01-01

    MicroRNA (miRNA) is a type of non-coding small RNA with a regulatory function at the posttranscriptional level in plant growth development and in response to abiotic stress. Previous studies have not reported on miRNAs responses to the phytohormone abscisic acid (ABA) at a genome-wide level in Populus euphratica, a model tree for studying abiotic stress responses in woody plants. Here we analyzed the miRNA response to ABA at a genome-wide level in P. euphratica utilizing high-throughput sequencing. To systematically perform a genome-wide analysis of ABA-responsive miRNAs in P. euphratica, nine sRNA libraries derived from three groups (control, treated with ABA for 1 day and treated with ABA for 4 days) were constructed. Each group included three libraries from three individual plantlets as biological replicate. In total, 151 unique mature sequences belonging to 75 conserved miRNA families were identified, and 94 unique sequences were determined to be novel miRNAs, including 56 miRNAs with miRNA(*) sequences. In all, 31 conserved miRNAs and 31 novel miRNAs response to ABA significantly differed among the groups. In addition, 4132 target genes were predicted for the conserved and novel miRNAs. Confirmed by real-time qPCR, expression changes of miRNAs were inversely correlated with the expression profiles of their putative targets. The Populus special or novel miRNA-target interactions were predicted might be involved in some biological process related stress tolerance. Our analysis provides a comprehensive view of how P. euphratica miRNA respond to ABA, and moreover, different temporal dynamics were observed in different ABA-treated libraries. PMID:27582743

  5. Introducing the Black Hole

    Science.gov (United States)

    Ruffini, Remo; Wheeler, John A.

    1971-01-01

    discusses the cosmology theory of a black hole, a region where an object loses its identity, but mass, charge, and momentum are conserved. Include are three possible formation processes, theorized properties, and three way they might eventually be detected. (DS)

  6. Janus black holes

    Science.gov (United States)

    Bak, Dongsu; Gutperle, Michael; Janik, Romuald A.

    2011-10-01

    In this paper Janus black holes in A dS 3 are considered. These are static solutions of an Einstein-scalar system with broken translation symmetry along the horizon. These solutions are dual to interface conformal field theories at finite temperature. An approximate solution is first constructed using perturbation theory around a planar BTZ blackhole. Numerical and exact solutions valid for all sets of parameters are then found and compared. Using the exact solution the thermodynamics of the system is analyzed. The entropy associated with the Janus black hole is calculated and it is found that the entropy of the black Janus is the sum of the undeformed black hole entropy and the entanglement entropy associated with the defect.

  7. Black Widow Spider

    Science.gov (United States)

    ... dling boxes, firewood, lumber, and rocks, etc. The black widow is commonly found in the following places: • Outdoors - woodpiles, rubble piles, under stones, in hol- low stumps, and in rodent burrows, privies, sheds ...

  8. Cosmological Black Holes

    OpenAIRE

    Stornaiolo, Cosimo

    2001-01-01

    In this paper we propose a model for the formation of the cosmological voids. We show that cosmological voids can form directly after the collapse of extremely large wavelength perturbations into low-density black holes or cosmological black holes (CBH). Consequently the voids are formed by the comoving expansion of the matter that surrounds the collapsed perturbation. It follows that the universe evolves, in first approximation, according to the Einstein-Straus cosmological model. We discuss...

  9. Quantum black holes

    International Nuclear Information System (INIS)

    No particle theory can be complete without gravity. Einstein's theory of gravity is of the Euler-Lagrange form, but standard quantization procedure fails. In quantum gravity the higher order interactions have a dimensionality different form the fundamental ones, because Newton's constant G has dimensions and the renormalization procedure fails. Another problem with quantum gravity is even more mysterious. Suppose that we had regularized the gravitational forces at the small distance end in the way that the weak intermediate vector boson regularized the fundamental 4-fermion interaction vertex of the weak interactions. Then what we discover is that the gravitational forces are unstable. Given sufficiently large amount of matter, it can collapse under its own weight. Classical general relativity tells us what will happen: a black hole is formed. But how is this formulated in quantum theory. S. Hawking observed that when a field theory is quantized in the background metric of a black hole, the black hole actually emits particles in a completely random thermal way. Apparently black holes are just another form of matter unstable against Hawking decay. Unfortunately this picture cannot be complete. The problem is that the quantum version of black holes has infinite phase space, and other symptoms of a run-away solution. Black holes are the heaviest and most compact forms of matter that can be imagined. A complete particle theory can have nothing but a spectrum of black-hole like objects at it high-energy end. This is why it is believed that a resolution of the black hole problem will in time disclose the complete small-distance structure of our world. 6 references

  10. Black Is Cool!

    Institute of Scientific and Technical Information of China (English)

    Dorine; Houston

    1997-01-01

    Do you remember the colors the college freshmen dyed their hair when you were here? Turquoise, orange, bright yellow.... Things have changed. Black has (?)ome the color of choice among the young people. Young men and women alike dye their hair coal black. The women let their hair grow very long. and it hangs straight and stringy down their backs. The young men leave it long on

  11. Modelling quantum black hole

    CERN Document Server

    Govindarajan, T R

    2016-01-01

    Novel bound states are obtained for manifolds with singular potentials. These singular potentials require proper boundary conditions across boundaries. The number of bound states match nicely with what we would expect for black holes. Also they serve to model membrane mechanism for the black hole horizons in simpler contexts. The singular potentials can also mimic expanding boundaries elegantly, there by obtaining appropriately tuned radiation rates.

  12. Cosmic censorship inside black holes

    CERN Document Server

    Thorlacius, L

    2006-01-01

    A simple argument is given that a traversable Cauchy horizon inside a black hole is incompatible with unitary black hole evolution. The argument assumes the validity of black hole complementarity and applies to a generic black hole carrying angular momentum and/or charge. In the second part of the paper we review recent work on the semiclassical geometry of two-dimensional charged black holes.

  13. Black hole critical phenomena without black holes

    Indian Academy of Sciences (India)

    Steven L Liebling

    2000-10-01

    Studying the threshold of black hole formation via numerical evolution has led to the discovery of fascinating nonlinear phenomena. Power-law mass scaling, aspects of universality, and self-similarity have now been found for a large variety of models. However, questions remain. Here I briefly review critical phenomena, discuss some recent results, and describe a model which demonstrates similar phenomena without gravity.

  14. Charged Galileon black holes

    Science.gov (United States)

    Babichev, Eugeny; Charmousis, Christos; Hassaine, Mokhtar

    2015-05-01

    We consider an Abelian gauge field coupled to a particular truncation of Horndeski theory. The Galileon field has translation symmetry and couples non minimally both to the metric and the gauge field. When the gauge-scalar coupling is zero the gauge field reduces to a standard Maxwell field. By taking into account the symmetries of the action, we construct charged black hole solutions. Allowing the scalar field to softly break symmetries of spacetime we construct black holes where the scalar field is regular on the black hole event horizon. Some of these solutions can be interpreted as the equivalent of Reissner-Nordstrom black holes of scalar tensor theories with a non trivial scalar field. A self tuning black hole solution found previously is extended to the presence of dyonic charge without affecting whatsoever the self tuning of a large positive cosmological constant. Finally, for a general shift invariant scalar tensor theory we demonstrate that the scalar field Ansatz and method we employ are mathematically compatible with the field equations. This opens up the possibility for novel searches of hairy black holes in a far more general setting of Horndeski theory.

  15. Ultramassive Black Hole Coalescence

    CERN Document Server

    Khan, Fazeel; Berczik, Peter

    2015-01-01

    Although supermassive black holes (SMBHs) correlate well with their host galaxies, there is an emerging view that outliers exist. Henize 2-10, NGC 4889, and NGC1277 are examples of SMBHs at least an order of magnitude more massive than their host galaxy suggests. The dynamical effects of such ultramassive central black holes is unclear. Here, we perform direct N-body simulations of mergers of galactic nuclei where one black hole is ultramassive to study the evolution of the remnant and the black hole dynamics in this extreme regime. We find that the merger remnant is axisymmetric near the center, while near the large SMBH influence radius, the galaxy is triaxial. The SMBH separation shrinks rapidly due to dynamical friction, and quickly forms a binary black hole; if we scale our model to the most massive estimate for the NGC1277 black hole, for example, the timescale for the SMBH separation to shrink from nearly a kiloparsec to less than a parsec is roughly 10 Myr. By the time the SMBHs form a hard binary, gr...

  16. Growth CO2 concentration modifies the transpiration response of Populus deltoides to drought and vapor pressure deficit

    International Nuclear Information System (INIS)

    To gain a better understanding of the hydraulic constraints on transpiration, altered canopy water relations in response to elevated carbon dioxide was evaluated in a morphological context. It was expected that by integrating the information gained into predictive models of canopy water balance in elevated carbon dioxide, our understanding of leaf-level responses to drought stresses and evaporative demand will also improve. To achieve these objectives, transpiration rates and leaf-to-sapwood area ratios in clonal stands of cottonwoods grown in near-ambient and elevated carbon dioxide were measured at the Biosphere 2 facility near Oracle, Arizona. Results were interpreted in terms of physical controls versus the direct and indirect effects of growth mediated by morphological changes on transpiration fluxes during periods of drought and high evaporative demand. Leaf-level transpiration rates were found to be nearly equivalent across carbon dioxide treatments when soil water was not limited. However, during drought stress, canopy-level transpiration was roughly equivalent across carbon dioxide treatments, but leaf-level fluxes were reduced in elevated carbon dioxide by a factor equal to the leaf area ratio of the canopies. This shift from equivalent leaf-level transpiration to equivalent canopy-level transpiration with increasing drought stress is taken to mean that maximum water use rates are controlled by atmospheric demand at high soil water content and by soil water availability at low soil water content. Changes in vapor pressure deficits had less pronounced effect on transpiration than changes in soil water content. 37 refs., 3 tabs., 5 figs

  17. Growth CO{sub 2} concentration modifies the transpiration response of Populus deltoides to drought and vapor pressure deficit

    Energy Technology Data Exchange (ETDEWEB)

    Engel, V. C. [South Florida Natural Resources Center, Everglades National Park, Homestead, FL (United States); Griffin, K. L. [Columbia University, Lamont-Doherty Earth Observatory, Palisades, NY (United States); Murthy, R.; Patterson, L.; Klimas, C. [Columbia University, Biosphere 2 Center, Oracle, AZ (United States); Potosnak, M. [National Center for Atmospheric Research, Boulder, CO (United States)

    2004-10-01

    To gain a better understanding of the hydraulic constraints on transpiration, altered canopy water relations in response to elevated carbon dioxide was evaluated in a morphological context. It was expected that by integrating the information gained into predictive models of canopy water balance in elevated carbon dioxide, our understanding of leaf-level responses to drought stresses and evaporative demand will also improve. To achieve these objectives, transpiration rates and leaf-to-sapwood area ratios in clonal stands of cottonwoods grown in near-ambient and elevated carbon dioxide were measured at the Biosphere 2 facility near Oracle, Arizona. Results were interpreted in terms of physical controls versus the direct and indirect effects of growth mediated by morphological changes on transpiration fluxes during periods of drought and high evaporative demand. Leaf-level transpiration rates were found to be nearly equivalent across carbon dioxide treatments when soil water was not limited. However, during drought stress, canopy-level transpiration was roughly equivalent across carbon dioxide treatments, but leaf-level fluxes were reduced in elevated carbon dioxide by a factor equal to the leaf area ratio of the canopies. This shift from equivalent leaf-level transpiration to equivalent canopy-level transpiration with increasing drought stress is taken to mean that maximum water use rates are controlled by atmospheric demand at high soil water content and by soil water availability at low soil water content. Changes in vapor pressure deficits had less pronounced effect on transpiration than changes in soil water content. 37 refs., 3 tabs., 5 figs.

  18. Black holes and beyond

    Energy Technology Data Exchange (ETDEWEB)

    NONE

    2002-02-01

    Belief in the existence of black holes is the ultimate act of faith for a physicist. First suggested by the English clergyman John Michell in the year 1784, the gravitational pull of a black hole is so strong that nothing - not even light - can escape. Gravity might be the weakest of the fundamental forces but black-hole physics is not for the faint-hearted. Black holes present obvious problems for would-be observers because they cannot, by definition, be seen with conventional telescopes - although before the end of the decade gravitational-wave detectors should be able to study collisions between black holes. Until then astronomers can only infer the existence of a black hole from its gravitational influence on other matter, or from the X-rays emitted by gas and dust as they are dragged into the black hole. However, once this material passes through the 'event horizon' that surrounds the black hole, we will never see it again - not even with X-ray specs. Despite these observational problems, most physicists and astronomers believe that black holes do exist. Small black holes a few kilometres across are thought to form when stars weighing more than about two solar masses collapse under the weight of their own gravity, while supermassive black holes weighing millions of solar masses appear to be present at the centre of most galaxies. Moreover, some brave physicists have proposed ways to make black holes - or at least event horizons - in the laboratory. The basic idea behind these 'artificial black holes' is not to compress a large amount of mass into a small volume, but to reduce the speed of light in a moving medium to less than the speed of the medium and so create an event horizon. The parallels with real black holes are not exact but the experiments could shed new light on a variety of phenomena. The first challenge, however, is to get money for the research. One year on from a high-profile meeting on artificial black holes in London, for

  19. Structure and diversity of ground mesofauna inUlmus and Populus consortia in the industrial areas of mining and smelting complex of krivyi rig basin

    Directory of Open Access Journals (Sweden)

    V. V. Kachinskaya

    2010-05-01

    Full Text Available The structure and biological diversity of ground mesofauna on a consortium level of organisation of ecosystems are considered. Indicators of structural organisation and biodiversity of ground mesofauna were analised in Ulmus and Populus consortia in the conditions of industrial territories of mining and smelting complex of Krivyi Rig Basin. It is established that taxonomical structure of ground mesofauna is characterised by insignificant number and quantity of taxonomical groups. Prevalence of hortobionts and herpetobionts in morpho-ecological structure of the community testifies to their attachment to consortium’s determinants and influence of steppe climate on its structure. Dominance of phytophages and polyphages in trophic structure is caused by a combination of consortium determinants specificity and «a zone source» of the fauna formations. The structural organisation of ground mesofauna in consortia of Ulmus and Populus in the conditions of industrial sites is characterised by simplified taxonomical structure with low biodiversity at all levels.

  20. THE FIBER MORPHOLOGY VARIATION OF TRIPLOID CLONE OF POPULUS TOMENTOSA CARR.AND ITS SUPPOSED HARVESTING AGE FOR THE PAPER INDUSTRY

    Institute of Scientific and Technical Information of China (English)

    YongmingFan; ZhiyiZhang; YiminXie; dakaiRen; yuanyuanLuo; yuyingWu; jingHe

    2004-01-01

    The fiber morphology variation of triploid clone of Populus tomentosa Cart. and the supposed harvesting age for the paper industry were investigated in this paper. The results shows that in the first few years, 2-4 years for example, the fiber length at breast highg rows faster than it does in the later years. But the standard deviation of distribution in fiber length at breast high in mature wood is larger than in the young tree. The technologically harvestable age of triploid clone of Populus tomentosa Carr., BL304 could be 4-7 year old to meet the requirement for paper industry. The distribution of fiber length become concentrated within an annual ring as the tree grows. The test results also show that the cloned poplar has a small Runkel ratio value (less than 0.4, generally about 0.3), and this ratio increases slightly with the tree grows.

  1. THE FIBER MORPHOLOGY VARIATION OF TRIPLOID CLONE OF POPULUS TOMENTOSA CARR.AND ITS SUPPOSED HARVESTING AGE FOR THE PAPER INDUSTRY

    Institute of Scientific and Technical Information of China (English)

    Yongming Fan; Zhiyi Zhang; Yimin Xie; dakai Ren; yuanyuan Luo; yuying Wu; jing He

    2004-01-01

    The fiber morphology variation of triploid clone of Populus tomentosa Carr. and the supposed harvesting age for the paper industry were investigated in this paper. The results shows that in the first few years,2-4 years for example, the fiber length at breast high grows faster than it does in the later years. But the standard deviation of distribution in fiber length at breast high in mature wood is larger than in the young tree. The technologically harvestable age of triploid clone of Populus tomentosa Carr., BL304could be 4-7 year old to meet the requirement for paper industry. The distribution of fiber length become concentrated within an annual ring as the tree grows. The test results also show that the cloned poplar has a small Runkel ratio value (less than 0.4,generally about 0.3), and this ratio increases slightly with the tree grows.

  2. Charged Galileon black holes

    CERN Document Server

    Babichev, Eugeny; Hassaine, Mokhtar

    2015-01-01

    We consider an Abelian gauge field coupled to a particular truncation of Horndeski theory. The Galileon field has translation symmetry and couples non minimally both to the metric and the gauge field. When the gauge-scalar coupling is zero the gauge field reduces to a standard Maxwell field. By taking into account the symmetries of the action, we construct charged black hole solutions. Allowing the scalar field to softly break symmetries of spacetime we construct black holes where the scalar field is regular on the black hole event horizon. Some of these solutions can be interpreted as the equivalent of Reissner-Nordstrom black holes of scalar tensor theories with a non trivial scalar field. A self tuning black hole solution found previously is extended to the presence of dyonic charge without affecting whatsoever the self tuning of a large positive cosmological constant. Finally, for a general shift invariant scalar tensor theory we demonstrate that the scalar field Ansatz and method we employ are mathematic...

  3. Black Afrikaans: An alternative use

    Directory of Open Access Journals (Sweden)

    Anna P. Maritz

    2016-09-01

    Full Text Available This article provides a first look at the nature of the alternative functions of Black Afrikaans. These functions realise when Black Afrikaans is imitated by Afrikaans mother-tongue speakers. The functions of the alternative use of Black Afrikaans centre on: the social nature of the variety, sensitivity as a deciding role-player, identity, humour, inclusivity and exclusivity, language repertoire and similar variety. Furthermore, because of the direct relationship between Black Afrikaans, Pidginised Afrikaans and the imitation of Black Afrikaans, these varieties are compared to establish a starting point description for the imitation of Black Afrikaans, as the variety has not yet been described.

  4. The Populus Superoxide Dismutase Gene Family and Its Responses to Drought Stress in Transgenic Poplar Overexpressing a Pine Cytosolic Glutamine Synthetase (GS1a)

    OpenAIRE

    Molina-Rueda, Juan Jesús; Tsai, Chung Jui; Kirby, Edward G.

    2013-01-01

    Background Glutamine synthetase (GS) plays a central role in plant nitrogen assimilation, a process intimately linked to soil water availability. We previously showed that hybrid poplar (Populus tremula X alba, INRA 717-1B4) expressing ectopically a pine cytosolic glutamine synthetase gene (GS1a) display enhanced tolerance to drought. Preliminary transcriptome profiling revealed that during drought, members of the superoxide dismutase (SOD) family were reciprocally regulated in GS poplar when...

  5. Intraspecific variation in root and leaf traits and leaf-root trait linkages in eight aspen demes (Populus tremula and P. tremuloides)

    OpenAIRE

    Hajek, Peter; Hertel, Dietrich; Leuschner, Christoph

    2013-01-01

    Leaf and fine root morphology and physiology have been found to vary considerably among tree species, but not much is known about intraspecific variation in root traits and their relatedness to leaf traits. Various aspen progenies (Populus tremula and P. tremuloides) with different growth performance are used in short-rotation forestry. Hence, a better understanding of the link between root trait syndromes and the adaptation of a deme to a particular environment is essential in order to impro...

  6. Examination of correlation between histidine and nickel absorption by Morus L., Robinia pseudoacacia L. and Populus nigra L. using HPLC-MS and ICP-MS.

    Science.gov (United States)

    Ozen, Sukran Akkus; Yaman, Mehmet

    2016-08-01

    In this study, HPLC-MS and ICP-MS methods were used for the determination of histidine and nickel in Morus L., Robinia pseudoacacia L., and Populus nigra L. leaves taken from industrial areas including Gaziantep and Bursa cities. In the determination of histidine by HPLC-MS, all of the system parameters such as flow rate of mobile phase, fragmentor potential, injection volume and column temperature were optimized and found to be 0.2 mL min(-1), 70 V, 15 µL, and 20°C, respectively. Under the optimum conditions, histidine was extracted from plant sample by distilled water at 90°C for 30 min. Concentrations of histidine as mg kg(-1) were found to be between 2-9 for Morus L., 6-13 for Robinia pseudoacacia L., and 2-10 for Populus nigra L. Concentrations of nickel were in the ranges of 5-10 mg kg(-1) for Morus L., 3-10 mg kg(-1) for Robinia pseudoacacia L., and 0.6-4 mg kg(-1) for Populus nigra L. A significant linear correlation (r = 0.78) between histidine and Ni was observed for Populus nigra L., whereas insignificant linear correlation for Robinia pseudoacacia L. (r = 0.22) were seen. Limits of detection (LOD) and quantitation (LOQ) were found to be 0.025 mg Ni L(-1) and 0.075 mg Ni L(-1), respectively.

  7. IAA oxidase activity in relation to adventitious root formation on stem cuttings of some forest tree species. [Salix tetrasperma, Populus Robusta, Hibiscus rosa-sinensis, Eucalyptus citriodora

    Energy Technology Data Exchange (ETDEWEB)

    Bansal, M.P.; Nanda, K.K.

    1981-01-01

    In rooting tests with stem cuttings, IAA oxidase activity was found to be very high in Salix tetrasperma and Populus 'Robusta' both of which rooted profusely, less in Hibiscus rosa-sinensis which rooted but weakly and insignificant in Eucalyptus citriodora, which did not root at all. Proteins extracted from the stem cuttings of E. citriodora inhibited IAA oxidase activity, and also root formation on hypocotyl cuttings of Phaseolus mungo.

  8. Examination of correlation between histidine and nickel absorption by Morus L., Robinia pseudoacacia L. and Populus nigra L. using HPLC-MS and ICP-MS.

    Science.gov (United States)

    Ozen, Sukran Akkus; Yaman, Mehmet

    2016-08-01

    In this study, HPLC-MS and ICP-MS methods were used for the determination of histidine and nickel in Morus L., Robinia pseudoacacia L., and Populus nigra L. leaves taken from industrial areas including Gaziantep and Bursa cities. In the determination of histidine by HPLC-MS, all of the system parameters such as flow rate of mobile phase, fragmentor potential, injection volume and column temperature were optimized and found to be 0.2 mL min(-1), 70 V, 15 µL, and 20°C, respectively. Under the optimum conditions, histidine was extracted from plant sample by distilled water at 90°C for 30 min. Concentrations of histidine as mg kg(-1) were found to be between 2-9 for Morus L., 6-13 for Robinia pseudoacacia L., and 2-10 for Populus nigra L. Concentrations of nickel were in the ranges of 5-10 mg kg(-1) for Morus L., 3-10 mg kg(-1) for Robinia pseudoacacia L., and 0.6-4 mg kg(-1) for Populus nigra L. A significant linear correlation (r = 0.78) between histidine and Ni was observed for Populus nigra L., whereas insignificant linear correlation for Robinia pseudoacacia L. (r = 0.22) were seen. Limits of detection (LOD) and quantitation (LOQ) were found to be 0.025 mg Ni L(-1) and 0.075 mg Ni L(-1), respectively. PMID:26709863

  9. Moving Away from the Reference Genome: Evaluating a Peptide Sequencing Tagging Approach for Single Amino Acid Polymorphism Identifications in the Genus Populus

    Energy Technology Data Exchange (ETDEWEB)

    Abraham, Paul E [ORNL; Adams, Rachel M [ORNL; Tuskan, Gerald A [ORNL; Hettich, Robert {Bob} L [ORNL

    2013-01-01

    The genetic diversity across natural populations of the model organism, Populus, is extensive, containing a single nucleotide polymorphism roughly every 200 base pairs. When deviations from the reference genome occur in coding regions, they can impact protein sequences. Rather than relying on a static reference database to profile protein expression, we employed a peptide sequence tagging (PST) approach capable of decoding the plasticity of the Populus proteome. Using shotgun proteomics data from two genotypes of P. trichocarpa, a tag-based approach enabled the detection of 6,653 unexpected sequence variants. Through manual validation, our study investigated how the most abundant chemical modification (methionine oxidation) could masquerade as a sequence variant (AlaSer) when few site-determining ions existed. In fact, precise localization of an oxidation site for peptides with more than one potential placement was indeterminate for 70% of the MS/MS spectra. We demonstrate that additional fragment ions made available by high energy collisional dissociation enhances the robustness of the peptide sequence tagging approach (81% of oxidation events could be exclusively localized to a methionine). We are confident that augmenting fragmentation processes for a PST approach will further improve the identification of single amino acid polymorphism in Populus and potentially other species as well.

  10. Turbulent black holes.

    Science.gov (United States)

    Yang, Huan; Zimmerman, Aaron; Lehner, Luis

    2015-02-27

    We demonstrate that rapidly spinning black holes can display a new type of nonlinear parametric instability-which is triggered above a certain perturbation amplitude threshold-akin to the onset of turbulence, with possibly observable consequences. This instability transfers from higher temporal and azimuthal spatial frequencies to lower frequencies-a phenomenon reminiscent of the inverse cascade displayed by (2+1)-dimensional fluids. Our finding provides evidence for the onset of transitory turbulence in astrophysical black holes and predicts observable signatures in black hole binaries with high spins. Furthermore, it gives a gravitational description of this behavior which, through the fluid-gravity duality, can potentially shed new light on the remarkable phenomena of turbulence in fluids.

  11. Black hole entropy quantization

    CERN Document Server

    Corichi, A; Fernandez-Borja, E; Corichi, Alejandro; Diaz-Polo, Jacobo; Fernandez-Borja, Enrique

    2006-01-01

    Ever since the pioneer works of Bekenstein and Hawking, black hole entropy has been known to have a quantum origin. Furthermore, it has long been argued by Bekenstein that entropy should be quantized in discrete (equidistant) steps given its identification with horizon area in (semi-)classical general relativity and the properties of area as an adiabatic invariant. This lead to the suggestion that black hole area should also be quantized in equidistant steps to account for the discrete black hole entropy. Here we shall show that loop quantum gravity, in which area is not quantized in equidistant steps can nevertheless be consistent with Bekenstein's equidistant entropy proposal in a subtle way. For that we perform a detailed analysis of the number of microstates compatible with a given area and show that an observed oscillatory behavior in the entropy-area relation, when properly interpreted yields an entropy that has discrete, equidistant values that are consistent with the Bekenstein framework.

  12. Photon Black Holes

    CERN Document Server

    Hernández, X; Mendoza, S; Sussman, R A

    2005-01-01

    We study the relationship between the energy and entropy of a black body photon gas, within an idealised spherical adiabatic enclosure of radius R, as this is compressed into a self-gravitating regime. We show that this regime approximately coincides with the black hole regime for the system, i.e., R ~ R_{s}, where R_{s} denotes the Schwarzschild radius of the system. The entropy of this system is always below the suggested Holographic bound, even as R \\to R_{s}. A plausible quantum configuration for the photon gas at R \\to R_{s} is suggested, which satisfies all energy, entropy and temperature black hole conditions. Finally we examine our results from the point of view of recent Loop Quantum Gravity ideas.

  13. Black Hole Bose Condensation

    Science.gov (United States)

    Vaz, Cenalo; Wijewardhana, L. C. R.

    2013-12-01

    General consensus on the nature of the degrees of freedom responsible for the black hole entropy remains elusive despite decades of effort dedicated to the problem. Different approaches to quantum gravity disagree in their description of the microstates and, more significantly, in the statistics used to count them. In some approaches (string theory, AdS/CFT) the elementary degrees of freedom are indistinguishable, whereas they must be treated as distinguishable in other approaches to quantum gravity (eg., LQG) in order to recover the Bekenstein-Hawking area-entropy law. However, different statistics will imply different behaviors of the black hole outside the thermodynamic limit. We illustrate this point by quantizing the Bañados-Teitelboim-Zanelli (BTZ) black hole, for which we argue that Bose condensation will occur leading to a "cold", stable remnant.

  14. Turbulent black holes.

    Science.gov (United States)

    Yang, Huan; Zimmerman, Aaron; Lehner, Luis

    2015-02-27

    We demonstrate that rapidly spinning black holes can display a new type of nonlinear parametric instability-which is triggered above a certain perturbation amplitude threshold-akin to the onset of turbulence, with possibly observable consequences. This instability transfers from higher temporal and azimuthal spatial frequencies to lower frequencies-a phenomenon reminiscent of the inverse cascade displayed by (2+1)-dimensional fluids. Our finding provides evidence for the onset of transitory turbulence in astrophysical black holes and predicts observable signatures in black hole binaries with high spins. Furthermore, it gives a gravitational description of this behavior which, through the fluid-gravity duality, can potentially shed new light on the remarkable phenomena of turbulence in fluids. PMID:25768746

  15. Noncommutative black hole thermodynamics

    International Nuclear Information System (INIS)

    We give a general derivation, for any static spherically symmetric metric, of the relation Th=(K/2π) connecting the black hole temperature (Th) with the surface gravity (K), following the tunneling interpretation of Hawking radiation. This derivation is valid even beyond the semi-classical regime, i.e. when quantum effects are not negligible. The formalism is then applied to a spherically symmetric, stationary noncommutative Schwarzschild space-time. The effects of backreaction are also included. For such a black hole the Hawking temperature is computed in a closed form. A graphical analysis reveals interesting features regarding the variation of the Hawking temperature (including corrections due to noncommutativity and backreaction) with the small radius of the black hole. The entropy and tunneling rate valid for the leading order in the noncommutative parameter are calculated. We also show that the noncommutative Bekenstein-Hawking area law has the same functional form as the usual one

  16. Tunneling Through Black Rings

    Institute of Scientific and Technical Information of China (English)

    ZHAO Liu

    2007-01-01

    Hawking radiation of black ring solutions to 5-dimensional Einstein-Maxwell-dilaton theory is analyzed by use of the Parikh-Wilczek tunneling method. To get the correct tunneling amplitude and emission rate, we adopt and develop the Angheben-Nadalini-Vanzo-Zerbini covariant approach to cover the effects of rotation and electronic discharge all at once, and the effect of back reaction is also taken into account. This constitutes a unified approach to the tunneling problem. Provided the first law of thermodynamics for black rings holds, the emission rate is proportional to the exponential of the change of Bekenstein-Hawking entropy. Explicit calculation for black ring temperatures agrees exactly with the results obtained via the classical surface gravity method and the quasi-local formalism.

  17. Slowly balding black holes

    International Nuclear Information System (INIS)

    The 'no-hair' theorem, a key result in general relativity, states that an isolated black hole is defined by only three parameters: mass, angular momentum, and electric charge; this asymptotic state is reached on a light-crossing time scale. We find that the no-hair theorem is not formally applicable for black holes formed from the collapse of a rotating neutron star. Rotating neutron stars can self-produce particles via vacuum breakdown forming a highly conducting plasma magnetosphere such that magnetic field lines are effectively ''frozen in'' the star both before and during collapse. In the limit of no resistivity, this introduces a topological constraint which prohibits the magnetic field from sliding off the newly-formed event horizon. As a result, during collapse of a neutron star into a black hole, the latter conserves the number of magnetic flux tubes NB=eΦ∞/(πc(ℎ/2π)), where Φ∞≅2π2BNSRNS3/(PNSc) is the initial magnetic flux through the hemispheres of the progenitor and out to infinity. We test this theoretical result via 3-dimensional general relativistic plasma simulations of rotating black holes that start with a neutron star dipole magnetic field with no currents initially present outside the event horizon. The black hole's magnetosphere subsequently relaxes to the split-monopole magnetic field geometry with self-generated currents outside the event horizon. The dissipation of the resulting equatorial current sheet leads to a slow loss of the anchored flux tubes, a process that balds the black hole on long resistive time scales rather than the short light-crossing time scales expected from the vacuum no-hair theorem.

  18. Slowly balding black holes

    Science.gov (United States)

    Lyutikov, Maxim; McKinney, Jonathan C.

    2011-10-01

    The “no-hair” theorem, a key result in general relativity, states that an isolated black hole is defined by only three parameters: mass, angular momentum, and electric charge; this asymptotic state is reached on a light-crossing time scale. We find that the no-hair theorem is not formally applicable for black holes formed from the collapse of a rotating neutron star. Rotating neutron stars can self-produce particles via vacuum breakdown forming a highly conducting plasma magnetosphere such that magnetic field lines are effectively “frozen in” the star both before and during collapse. In the limit of no resistivity, this introduces a topological constraint which prohibits the magnetic field from sliding off the newly-formed event horizon. As a result, during collapse of a neutron star into a black hole, the latter conserves the number of magnetic flux tubes NB=eΦ∞/(πcℏ), where Φ∞≈2π2BNSRNS3/(PNSc) is the initial magnetic flux through the hemispheres of the progenitor and out to infinity. We test this theoretical result via 3-dimensional general relativistic plasma simulations of rotating black holes that start with a neutron star dipole magnetic field with no currents initially present outside the event horizon. The black hole’s magnetosphere subsequently relaxes to the split-monopole magnetic field geometry with self-generated currents outside the event horizon. The dissipation of the resulting equatorial current sheet leads to a slow loss of the anchored flux tubes, a process that balds the black hole on long resistive time scales rather than the short light-crossing time scales expected from the vacuum no-hair theorem.

  19. Are Black Holes Springy?

    CERN Document Server

    Good, Michael R R

    2014-01-01

    A $(3+1)$-dimensional asymptotically flat Kerr black hole angular speed $\\Omega_+$ can be used to define an effective spring constant, $k=m\\Omega_+^2$. Its maximum value is the Schwarzschild surface gravity, $k = \\kappa $, which rapidly weakens as the black hole spins down and the temperature increases. The Hawking temperature is expressed in terms of the spring constant: $2\\pi T = \\kappa - k$. Hooke's law, in the extremal limit, provides the force $F = 1/4$, which is consistent with the conjecture of maximum force in general relativity.

  20. Noncommutative solitonic black hole

    International Nuclear Information System (INIS)

    We investigate solitonic black hole solutions in three-dimensional noncommutative spacetime. We do this in gravity with a negative cosmological constant coupled to a scalar field. Noncommutativity is realized with the Moyal product which is expanded up to first order in the noncommutativity parameter in two spatial directions. With numerical simulation we study the effect of noncommutativity by increasing the value of the noncommutativity parameter starting from commutative solutions. We find that even a regular soliton solution in the commutative case becomes a black hole solution when the noncommutativity parameter reaches a certain value. (paper)

  1. Noncommutative solitonic black hole

    Science.gov (United States)

    Chang-Young, Ee; Kimm, Kyoungtae; Lee, Daeho; Lee, Youngone

    2012-05-01

    We investigate solitonic black hole solutions in three-dimensional noncommutative spacetime. We do this in gravity with a negative cosmological constant coupled to a scalar field. Noncommutativity is realized with the Moyal product which is expanded up to first order in the noncommutativity parameter in two spatial directions. With numerical simulation we study the effect of noncommutativity by increasing the value of the noncommutativity parameter starting from commutative solutions. We find that even a regular soliton solution in the commutative case becomes a black hole solution when the noncommutativity parameter reaches a certain value.

  2. Horndeski black hole geodesics

    CERN Document Server

    Tretyakova, D A

    2016-01-01

    We examine geodesics for the scalar-tensor black holes in the Horndeski-Galileon framework. Our analysis shows that first kind relativistic orbits may not be present within some model parameters range. This is a highly pathological behavior contradicting to the black hole accretion and Solar System observations. We also present a new (although very similar to those previously known) solution, which contains the orbits we expect from a compact object, admits regular scalar field at the horizon and and can fit into the known stability criteria.

  3. Dancing with black holes

    CERN Document Server

    Aarseth, Sverre J

    2007-01-01

    We describe efforts over the last six years to implement regularization methods suitable for studying one or more interacting black holes by direct N-body simulations. Three different methods have been adapted to large-N systems: (i) Time-Transformed Leapfrog, (ii) Wheel-Spoke, and (iii) Algorithmic Regularization. These methods have been tried out with some success on GRAPE-type computers. Special emphasis has also been devoted to including post-Newtonian terms, with application to moderately massive black holes in stellar clusters. Some examples of simulations leading to coalescence by gravitational radiation will be presented to illustrate the practical usefulness of such methods.

  4. Modeling black hole evaporation

    CERN Document Server

    Fabbri, Alessandro

    2005-01-01

    The scope of this book is two-fold: the first part gives a fully detailed and pedagogical presentation of the Hawking effect and its physical implications, and the second discusses the backreaction problem, especially in connection with exactly solvable semiclassical models that describe analytically the black hole evaporation process. The book aims to establish a link between the general relativistic viewpoint on black hole evaporation and the new CFT-type approaches to the subject. The detailed discussion on backreaction effects is also extremely valuable.

  5. Black-pigmented sputum

    Directory of Open Access Journals (Sweden)

    Rafael Martínez-Girón

    2013-01-01

    Full Text Available Black-pigmented sputum, also called "melanoptysis," is a symptom that may be observed in certain pathologies such us coal workers′ pneumoconiosis (anthracosis. The cavitation and liquefaction of a fibrosed mass by an infectious process (tuberculosis, infections by anaerobes, etc. or by ischemic necrosis may cause expectoration of a blackish secretion. We report the case of a patient with labor precedents as a coal worker, from whom abundant black sputum was obtained in the course of an incidental expectoration. Cyto-histological findings are shown and a differential diagnosis is established.

  6. Superfluid Black Holes

    CERN Document Server

    Hennigar, Robie A; Tjoa, Erickson

    2016-01-01

    We present what we believe is the first example of a "$\\lambda$-line" phase transition in black hole thermodynamics. This is a line of (continuous) second order phase transitions which in the case of liquid $^4$He marks the onset of superfluidity. The phase transition occurs for a class of asymptotically AdS hairy black holes in Lovelock gravity where a real scalar field is conformally coupled to gravity. We discuss the origin of this phase transition and outline the circumstances under which it (or generalizations of it) could occur.

  7. Reflections on a Black Mirror

    CERN Document Server

    Good, Michael R R

    2016-01-01

    A black mirror is an accelerated boundary that produces particles in an exact correspondence to an evaporating black hole. We investigate the spectral dynamics of the particle creation during the formation process.

  8. The black hole final state

    OpenAIRE

    Horowitz, Gary T.; Maldacena, Juan

    2003-01-01

    We propose that in quantum gravity one needs to impose a final state boundary condition at black hole singularities. This resolves the apparent contradiction between string theory and semiclassical arguments over whether black hole evaporation is unitary.

  9. Quantum aspects of black holes

    CERN Document Server

    2015-01-01

    Beginning with an overview of the theory of black holes by the editor, this book presents a collection of ten chapters by leading physicists dealing with the variety of quantum mechanical and quantum gravitational effects pertinent to black holes. The contributions address topics such as Hawking radiation, the thermodynamics of black holes, the information paradox and firewalls, Monsters, primordial black holes, self-gravitating Bose-Einstein condensates, the formation of small black holes in high energetic collisions of particles, minimal length effects in black holes and small black holes at the Large Hadron Collider. Viewed as a whole the collection provides stimulating reading for researchers and graduate students seeking a summary of the quantum features of black holes.

  10. Meer bekend over Black Mold

    NARCIS (Netherlands)

    Duyvesteijn, R.G.E.; Kohrman, E.

    2008-01-01

    In de vollegrondsrozenteelt zorgde Black Mold in 2007 voor een groot aantal mislukte oculaties. In 2008 waren er aanzienlijk minder problemen. Uit onderzoek is meer bekend over de oorzaak en bestrijding van Black Mold.

  11. Conquering the Black Girl Blues.

    Science.gov (United States)

    Jones, Lani Valencia; Guy-Sheftall, Beverly

    2015-10-01

    An examination of the literature on epidemiology, etiology, and use of services for this population reveals an insufficient application of culturally congruent approaches to intervening with black women. An exploration of the social work practice literature and other relevant fields indicate that black feminist perspectives offer the opportunity to gain a clearer understanding of the intersection and influence of oppression among black women struggling with psychiatric issues and provide a useful framework for mental health practice with this population. This article discusses the evolving black feminist thought and summarizes the scholarship on black women's mental health services needs and utilization issues. The article includes a discussion of black feminisms as an emerging mental health perspective, arguing that black feminist perspectives in therapy provide an ideal framework for services that are responsive to the values and health needs of black women. The article concludes with a case vignette that illustrates some of its points.

  12. Conquering the Black Girl Blues.

    Science.gov (United States)

    Jones, Lani Valencia; Guy-Sheftall, Beverly

    2015-10-01

    An examination of the literature on epidemiology, etiology, and use of services for this population reveals an insufficient application of culturally congruent approaches to intervening with black women. An exploration of the social work practice literature and other relevant fields indicate that black feminist perspectives offer the opportunity to gain a clearer understanding of the intersection and influence of oppression among black women struggling with psychiatric issues and provide a useful framework for mental health practice with this population. This article discusses the evolving black feminist thought and summarizes the scholarship on black women's mental health services needs and utilization issues. The article includes a discussion of black feminisms as an emerging mental health perspective, arguing that black feminist perspectives in therapy provide an ideal framework for services that are responsive to the values and health needs of black women. The article concludes with a case vignette that illustrates some of its points. PMID:26489355

  13. Black Sea Bass genetic connectivity

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Microsatellite analysis of black sea bass was undertaken to determine magnitude and direction of mixing of black seabass across the Hatteras boundary, as well as...

  14. Herbivore-induced volatile emission in black poplar: regulation and role in attracting herbivore enemies.

    Science.gov (United States)

    Clavijo McCormick, Andrea; Irmisch, Sandra; Reinecke, Andreas; Boeckler, G Andreas; Veit, Daniel; Reichelt, Michael; Hansson, Bill S; Gershenzon, Jonathan; Köllner, Tobias G; Unsicker, Sybille B

    2014-08-01

    After herbivory, plants release volatile organic compounds from damaged foliage as well as from nearby undamaged leaves that attract herbivore enemies. Little is known about what controls the volatile emission differences between damaged and undamaged tissues and how these affect the orientation of herbivore enemies. We investigated volatile emission from damaged and adjacent undamaged foliage of black poplar (Populus nigra) after herbivory by gypsy moth (Lymantria dispar) caterpillars and determined the compounds mediating the attraction of the gypsy moth parasitoid Glyptapanteles liparidis (Braconidae). Female parasitoids were more attracted to gypsy moth-damaged leaves than to adjacent non-damaged leaves. The most characteristic volatiles of damaged versus neighbouring undamaged leaves included terpenes, green leaf volatiles and nitrogen-containing compounds, such as aldoximes and nitriles. Electrophysiological recordings and olfactometer bioassays demonstrated the importance of nitrogenous volatiles. Under field conditions, parasitic Hymenoptera were more attracted to traps baited with these substances than most other compounds. The differences in volatile emission profiles between damaged and undamaged foliage appear to be regulated by jasmonate signalling and the local activation of volatile biosynthesis. We conclude that characteristic volatiles from damaged black poplar foliage are essential cues enabling parasitoids to find their hosts.

  15. Black Hole Evaporation. A Survey

    OpenAIRE

    Benachenhou, Farid

    1994-01-01

    This thesis is a review of black hole evaporation with emphasis on recent results obtained for two dimensional black holes. First, the geometry of the most general stationary black hole in four dimensions is described and some classical quantities are defined. Then, a derivation of the spectrum of the radiation emitted during the evaporation is presented. In section four, a two dimensional model which has black hole solutions is introduced, the so-called CGHS model. These two dimensional blac...

  16. Black Hole: The Interior Spacetime

    CERN Document Server

    Ong, Yen Chin

    2016-01-01

    The information loss paradox is often discussed from the perspective of the observers who stay outside of a black hole. However, the interior spacetime of a black hole can be rather nontrivial. We discuss the open problems regarding the volume of a black hole, and whether it plays any role in information storage. We also emphasize the importance of resolving the black hole singularity, if one were to resolve the information loss paradox.

  17. Black Holes in Higher Dimensions

    Directory of Open Access Journals (Sweden)

    Reall Harvey S.

    2008-09-01

    Full Text Available We review black-hole solutions of higher-dimensional vacuum gravity and higher-dimensional supergravity theories. The discussion of vacuum gravity is pedagogical, with detailed reviews of Myers–Perry solutions, black rings, and solution-generating techniques. We discuss black-hole solutions of maximal supergravity theories, including black holes in anti-de Sitter space. General results and open problems are discussed throughout.

  18. Towards noncommutative quantum black holes

    International Nuclear Information System (INIS)

    In this paper we study noncommutative black holes. We use a diffeomorphism between the Schwarzschild black hole and the Kantowski-Sachs cosmological model, which is generalized to noncommutative minisuperspace. Through the use of the Feynman-Hibbs procedure we are able to study the thermodynamics of the black hole, in particular, we calculate the Hawking's temperature and entropy for the noncommutative Schwarzschild black hole

  19. Towards Noncommutative Quantum Black Holes

    OpenAIRE

    Lopez-Dominguez, J. C.; Obregon, O.; Ramirez, C.; Sabido, M.

    2006-01-01

    In this paper we study noncommutative black holes. We use a diffeomorphism between the Schwarzschild black hole and the Kantowski-Sachs cosmological model, which is generalized to noncommutative minisuperspace. Through the use of the Feynman-Hibbs procedure we are able to study the thermodynamics of the black hole, in particular, we calculate the Hawking's temperature and entropy for the noncommutative Schwarzschild black hole.

  20. The Black Ring is Unstable

    CERN Document Server

    Santos, Jorge E

    2015-01-01

    We study non-axisymmetric linearised gravitational perturbations of the Emparan-Reall black ring using numerical methods. We find an unstable mode whose onset lies within the "fat" branch of the black ring and continues into the "thin" branch. Together with previous results using Penrose inequalities that fat black rings are unstable, this provides numerical evidence that the entire black ring family is unstable.

  1. Allelic variation in PtGA20Ox associates with growth and wood properties in Populus spp.

    Directory of Open Access Journals (Sweden)

    Jiaxing Tian

    Full Text Available Populus tomentosa is an economically important tree crop that produces wood for lumber, pulp, paper, and biofuels. Wood quality traits are likely to be strongly affected by the plant hormone gibberellic acid (GA, which regulates growth. GA20Ox encodes one of the major regulatory enzymes of GA biosynthesis and may therefore play a large role in growth and wood quality. Here, linkage disequilibrium (LD studies were used to identify significant associations between single nucleotide polymorphisms (SNPs within PtGA20Ox and growth and wood-quality traits of P. tomentosa. We isolated a full-length GA20Ox cDNA from Populus tomentosa by reverse transcription (RT-PCR; this 1401 bp cDNA clone had an open reading frame of 1158 bp and encoded a protein of 385 amino acids. PtGA20Ox transcripts were maximally expressed in the mature xylem of vascular tissues, suggesting that PtGA20Ox is highly expressed and specifically associated with secondary xylem formation. Resequencing the PtGA20Ox locus of 36 individuals identified 55 SNPs, and the frequency of SNPs was 1/31 bp. The 29 most common SNPs (frequency>0.1 were genotyped in an association population (426 individuals that was also phenotyped for key growth and wood quality traits. LD did not extend over the entire gene (r(2<0.1, within 500 bp, demonstrating that a candidate-gene-based LD approach may the best way to understand the molecular basis underlying quantitative variation in this species. SNP- and haplotype-based association analyses indicated that four SNPs (false discovery rate Q<0.05 and 14 haplotypes (P<0.05 were significantly associated with growth and wood properties. The phenotypic variance explained by each SNP ranged from 3.44% to 14.47%. The SNP markers identified in this study can be applied to breeding programs for the improvement of growth and wood-property traits by marker-assisted selection.

  2. Warped products and black holes

    International Nuclear Information System (INIS)

    We apply the warped product space-time scheme to the Banados-Teitelboim-Zanelli black holes and the Reissner-Nordstroem-anti-de Sitter black hole to investigate their interior solutions in terms of warped products. It is shown that there exist no discontinuities of the Ricci and Einstein curvatures across event horizons of these black holes

  3. Blacks and the Women's Movement.

    Science.gov (United States)

    Loiacono, Stephanie

    1989-01-01

    Although Black female leaders were influential in creating the modern women's movement, feminism has evolved differently for both Black and White women. Suggests that, although Black women have struggled largely against racial and economic inequalities, women of all colors and backgrounds should embrace their diversity and unite to oppose racism…

  4. Black carbon in marine sediments

    NARCIS (Netherlands)

    Middelburg, J.J.; Nieuwenhuize, J.; Van Breugel, P.

    1999-01-01

    Concentrations of black carbon were determined for a number of marine sediments. A comparison of black carbon based on thermal oxidation and hot concentrated nitric acid pretreatments revealed that the latter significantly overestimates combustion derived carbon phases. Black carbon accounts for abo

  5. Warped products and black holes

    CERN Document Server

    Hong, S T

    2005-01-01

    We apply the warped product spacetime scheme to the Banados-Teitelboim-Zanelli black holes and the Reissner-Nordstr\\"om-anti-de Sitter black hole to investigate their interior solutions in terms of warped products. It is shown that there exist no discontinuities of the Ricci and Einstein curvatures across event horizons of these black holes.

  6. Black Progress: Convergence or Cleavage?

    Science.gov (United States)

    Hill, Robert B.

    1982-01-01

    The popular view of a permanent Black underclass falling farther behind an expanding Black middle class is disputed by empirical evidence that the underclass is experiencing upward mobility. The discrepancy stems from social scientists' overreliance on cross-sectional data rather than longitudinal data in analyzing economic change among Blacks.…

  7. Black silicon with black bus-bar strings

    DEFF Research Database (Denmark)

    Davidsen, Rasmus Schmidt; Tang, Peter Torben; Mizushima, Io;

    2016-01-01

    We present the combination of black silicon texturing and blackened bus-bar strings as a potential method for obtaining all-black solar panels, while using conventional, front-contacted solar cells. Black silicon was realized by mask-less reactive ion etching resulting in total, average reflectance...... below 0.5% across a 156x156 mm2 silicon wafer. Black bus-bars were realized by oxidized copper resulting in reflectance below 3% in the entire visible wavelength range. The combination of these two technologies may result in aesthetic, all-black panels based on conventional, front-contacted solar cells...

  8. Empowering Young Black Males

    Science.gov (United States)

    Kafele, Baruti K.

    2012-01-01

    Of all the challenges we face in education today, the author can think of none greater than the challenge of motivating, educating, and empowering black male learners. The fact that this group of students is in crisis is evident on multiple levels, starting with graduation rates. According to the Schott Foundation (2008), the U.S. high school…

  9. Black History Speech

    Science.gov (United States)

    Noldon, Carl

    2007-01-01

    The author argues in this speech that one cannot expect students in the school system to know and understand the genius of Black history if the curriculum is Eurocentric, which is a residue of racism. He states that his comments are designed for the enlightenment of those who suffer from a school system that "hypocritically manipulates Black…

  10. Black holes and qubits

    CERN Document Server

    Duff, M J

    2012-01-01

    Quantum entanglement lies at the heart of quantum information theory, with applications to quantum computing, teleportation, cryptography and communication. In the apparently separate world of quantum gravity, the Hawking effect of radiating black holes has also occupied centre stage. Despite their apparent differences, it turns out that there is a correspondence between the two.

  11. Trichomicosis pubis: black variety.

    OpenAIRE

    Neri, I.; Frassetto, A; Pasquinelli, G.; Patrizi, A.

    1994-01-01

    A case of a 25 year old man with the black variety of trichomicosis pubis is presented on account of its extreme rareity. Scanning electron microscopy confirms that trichomicosis pubis is caused by bacterial colonisation of the pubic hair and shows that bacteria are able to penetrate cuticular horny cells directly through their free plasma membrane.

  12. Rotating regular black holes

    Energy Technology Data Exchange (ETDEWEB)

    Bambi, Cosimo, E-mail: bambi@fudan.edu.cn; Modesto, Leonardo, E-mail: lmodesto@fudan.edu.cn

    2013-04-25

    The formation of spacetime singularities is a quite common phenomenon in General Relativity and it is regulated by specific theorems. It is widely believed that spacetime singularities do not exist in Nature, but that they represent a limitation of the classical theory. While we do not yet have any solid theory of quantum gravity, toy models of black hole solutions without singularities have been proposed. So far, there are only non-rotating regular black holes in the literature. These metrics can be hardly tested by astrophysical observations, as the black hole spin plays a fundamental role in any astrophysical process. In this Letter, we apply the Newman–Janis algorithm to the Hayward and to the Bardeen black hole metrics. In both cases, we obtain a family of rotating solutions. Every solution corresponds to a different matter configuration. Each family has one solution with special properties, which can be written in Kerr-like form in Boyer–Lindquist coordinates. These special solutions are of Petrov type D, they are singularity free, but they violate the weak energy condition for a non-vanishing spin and their curvature invariants have different values at r=0 depending on the way one approaches the origin. We propose a natural prescription to have rotating solutions with a minimal violation of the weak energy condition and without the questionable property of the curvature invariants at the origin.

  13. Moulting Black Holes

    Science.gov (United States)

    Bena, Iosif; Chowdhury, Borun D.; de Boer, Jan; El-Showk, Sheer; Shigemori, Masaki

    2012-03-01

    We find a family of novel supersymmetric phases of the D1-D5 CFT, which in certain ranges of charges have more entropy than all known ensembles. We also find bulk BPS configurations that exist in the same range of parameters as these phases, and have more entropy than a BMPV black hole; they can be thought of as coming from a BMPV black hole shedding a "hair" condensate outside of the horizon. The entropy of the bulk configurations is smaller than that of the CFT phases, which indicates that some of the CFT states are lifted at strong coupling. Neither the bulk nor the boundary phases are captured by the elliptic genus, which makes the coincidence of the phase boundaries particularly remarkable. Our configurations are supersymmetric, have non-Cardy-like entropy, and are the first instance of a black hole entropy enigma with a controlled CFT dual. Furthermore, contrary to common lore, these objects exist in a region of parameter space (between the "cosmic censorship bound" and the "unitarity bound") where no black holes were thought to exist.

  14. When Black Holes Collide

    Science.gov (United States)

    Baker, John

    2010-01-01

    Among the fascinating phenomena predicted by General Relativity, Einstein's theory of gravity, black holes and gravitational waves, are particularly important in astronomy. Though once viewed as a mathematical oddity, black holes are now recognized as the central engines of many of astronomy's most energetic cataclysms. Gravitational waves, though weakly interacting with ordinary matter, may be observed with new gravitational wave telescopes, opening a new window to the universe. These observations promise a direct view of the strong gravitational dynamics involving dense, often dark objects, such as black holes. The most powerful of these events may be merger of two colliding black holes. Though dark, these mergers may briefly release more energy that all the stars in the visible universe, in gravitational waves. General relativity makes precise predictions for the gravitational-wave signatures of these events, predictions which we can now calculate with the aid of supercomputer simulations. These results provide a foundation for interpreting expect observations in the emerging field of gravitational wave astronomy.

  15. Newborn Black Holes

    Science.gov (United States)

    Science Teacher, 2005

    2005-01-01

    Scientists using NASA's Swift satellite say they have found newborn black holes, just seconds old, in a confused state of existence. The holes are consuming material falling into them while somehow propelling other material away at great speeds. "First comes a blast of gamma rays followed by intense pulses of x-rays. The energies involved are much…

  16. Observational Evidence for Black Holes

    OpenAIRE

    Narayan, Ramesh; McClintock, Jeffrey E.

    2013-01-01

    Astronomers have discovered two populations of black holes: (i) stellar-mass black holes with masses in the range 5 to 30 solar masses, millions of which are present in each galaxy in the universe, and (ii) supermassive black holes with masses in the range 10^6 to 10^{10} solar masses, one each in the nucleus of every galaxy. There is strong circumstantial evidence that all these objects are true black holes with event horizons. The measured masses of supermassive black hole are strongly corr...

  17. BlackBerry For Dummies

    CERN Document Server

    Kao, Robert

    2010-01-01

    Get the most juice out of your BlackBerry handheld!. Feature-rich and complex, the BlackBerry is the number one smartphone in the corporate world is among the most popular handhelds for business users. This new and updated edition includes all the latest and greatest information on new and current BlackBerry mobile devices. Covering a range of valuable how-to topics, this helpful guide explores the BlackBerry's most useful features, techniques for getting the most out of your BlackBerry, and practical information about power usage.: Covers all aspects of the number one smartphone in the corpor

  18. Over spinning a black hole?

    Energy Technology Data Exchange (ETDEWEB)

    Bouhmadi-Lopez, Mariam; Cardoso, Vitor; Nerozzi, Andrea; Rocha, Jorge V, E-mail: mariam.bouhmadi@ist.utl.pt, E-mail: vitor.cardoso@ist.utl.pt, E-mail: andrea.nerozzi@ist.utl.pt, E-mail: jorge.v.rocha@ist.utl.pt [CENTRA, Department de Fisica, Instituto Superior Tecnico, Av. Rovisco Pais 1, 1049 Lisboa (Portugal)

    2011-09-22

    A possible process to destroy a black hole consists on throwing point particles with sufficiently large angular momentum into the black hole. In the case of Kerr black holes, it was shown by Wald that particles with dangerously large angular momentum are simply not captured by the hole, and thus the event horizon is not destroyed. Here we reconsider this gedanken experiment for black holes in higher dimensions. We show that this particular way of destroying a black hole does not succeed and that Cosmic Censorship is preserved.

  19. Growth of Primordial Black Holes

    Science.gov (United States)

    Harada, Tomohiro

    Primordial black holes have important observational implications through Hawking evaporation and gravitational radiation as well as being a candidate for cold dark matter. Those black holes are assumed to have formed in the early universe typically with the mass scale contained within the Hubble horizon at the formation epoch and subsequently accreted mass surrounding them. Numerical relativity simulation shows that primordial black holes of different masses do not accrete much, which contrasts with a simplistic Newtonian argument. We see that primordial black holes larger than the 'super-horizon' primordial black holes have decreasing energy and worm-hole like struture, suggesting the formation through quamtum processes.

  20. Determination of As in tree-rings of poplar (Populus alba L.) by U-shaped DC arc.

    Science.gov (United States)

    Marković, D M; Novović, I; Vilotić, D; Ignjatović, Lj

    2009-04-01

    An argon-stabilized U-shaped DC arc with a system for aerosol introduction was used for determination of As in poplar (Populus alba L.) tree-rings. After optimization of the operating parameters and selection of the most appropriate signal integration time (30 s), the limit of detection for As was reduced to 15.0 ng/mL. This detection limit obtained with the optimal integration time was compared with those for other methods: inductively coupled plasma-atomic emission spectrometry (ICP-AES), direct coupled plasma-atomic emission spectrometry (DCP-AES), microwave induced plasma-atomic emission spectrometry (MIP-AES) and improved thermospray flame furnace atomic absorption spectrometry (TS-FF-AAS). Arsenic is toxic trace element which can adversely affect plant, animal and human health. As an indicator of environment pollution we collected poplar tree-rings from two locations. The first area was close to the "Nikola Tesla" (TENT-A) power plant, Obrenovac, while the other was in the urban area of Novi Sad. In all cases elevated average concentrations of As were registered in poplar tree-rings from the Obrenovac location. PMID:18351436

  1. Comparative field performance of some agricultural crops under a ca-nopy of Populus deltoides and Ulmus wallichiana

    Institute of Scientific and Technical Information of China (English)

    Tariq Hussian Masoodi; Nasir Ahmad Masoodi; Sajad Ahmad Gangoo; Shah Murtaza Mushtaq; Hillal Ahmad

    2013-01-01

    The performance of maize, beans and sunflower was evalu-ated under a canopy of Populus deltoides and Ulmus wallichiana at Fac-ulty of Agriculture, Wadura. The germination, growth and yield of the three test crops were suppressed under both tree species. The reduction, however, decreased when the cultivation of test crops was continued for three years. The inhibition potential generally is in the order of P. del-toides U. wallichiana for beans. Available soil N, P and K increased under the canopy of the selected tree species. The soils under U. wallichiana were more fertile than those under P. deltoides. Chromatographic investigation of extracts showed that the soils under P. deltoides and U. wallichiana differed in their composition of phenolic acids and phenolic glycocides. Except for caffic acid, all other allelochemicals disappeared and were no longer recovered in soil samples obtained after the second or third year of cultivation. Tree-crop compatibility can be explored in greater detail for improved management of traditional agro-ecosystems in Kashmir to increase the overall productivity of the land.

  2. Vertical profiles reveal impact of ozone and temperature on carbon assimilation of Betula pendula and Populus tremula.

    Science.gov (United States)

    Mäenpää, Maarit; Riikonen, Johanna; Kontunen-Soppela, Sari; Rousi, Matti; Oksanen, Elina

    2011-08-01

    Rising temperature and tropospheric ozone (O(3)) concentrations are likely to affect carbon assimilation processes and thus the carbon sink strength of trees. In this study, we investigated the joint action of elevated ozone and temperature on silver birch (Betula pendula) and European aspen (Populus tremula) saplings in field conditions by combining free-air ozone exposure (1.2 × ambient) and infrared heaters (ambient +1.2 °C). At leaf level measurements, elevated ozone decreased leaf net photosynthesis (P(n)), while the response to elevated temperature was dependent on leaf position within the foliage. This indicates that leaf position has to be taken into account when leaf level data are collected and applied. The ozone effect on P(n) was partly compensated for at elevated temperature, showing an interactive effect of the treatments. In addition, the ratio of photosynthesis to stomatal conductance (P(n)/g(s) ratio) was decreased by ozone, which suggests decreasing water use efficiency. At the plant level, the increasing leaf area at elevated temperature resulted in a considerable increase in photosynthesis and growth in both species.

  3. Molecular evolution and expression divergence of the Populus euphratica Hsf genes provide insight into the stress acclimation of desert poplar.

    Science.gov (United States)

    Zhang, Jin; Jia, Huixia; Li, Jianbo; Li, Yu; Lu, Mengzhu; Hu, Jianjun

    2016-01-01

    Heat shock transcription factor (Hsf) family is one of the most important regulators in the plant kingdom. Hsf has been demonstrated to be involved in various processes associated with plant growth, development as well as in response to hormone and abiotic stresses. In this study, we carried out a comprehensive analysis of Hsf family in desert poplar, Populus euphratica. Total of 32 genes encoding Hsf were identified and they were classified into three main classes (A, B, and C). Gene structure and conserved motif analyses indicated that the members in each class were relatively conserved. Total of 10 paralogous pairs were identified in PeuHsf family, in which nine pairs were generated by whole genome duplication events. Ka/Ks analysis showed that PeuHsfs underwent purifying selection pressure. In addition, various cis-acting elements involved in hormone and stress responses located in the promoter regions of PeuHsfs. Gene expression analysis indicated that several PeuHsfs were tissue-specific expression. Compared to Arabidopsis, more PeuHsf genes were significantly induced by heat, drought, and salt stresses (21, 19, and 22 PeuHsfs, respectively). Our findings are helpful in understanding the distinguished adaptability of P. euphratica to extreme environment and providing a basis for functional analysis of PeuHsfs in the future. PMID:27425424

  4. Genetic structure of Populus hybrid zone along the Irtysh River provides insight into plastid-nuclear incompatibility.

    Science.gov (United States)

    Zeng, Yan-Fei; Zhang, Jian-Guo; Duan, Ai-Guo; Abuduhamiti, Bawerjan

    2016-06-16

    In plants, the maintenance of species integrity despite hybridization has often been explained by the co-adaption of nuclear gene complexes. However, the interaction between plastid and nuclear sub-genomes has been underestimated. Here, we analyzed the genetic structure of a Populus alba and P. tremula hybrid zone along the Irtysh River system in the Altai region, northwest China, using both nuclear microsatellites and plastid DNA sequences. We found high interspecific differentiation, although the hybrid P. × canescens was prevalent. Bayesian inference classified most hybrids into F1, followed by a few back-crosses to P. alba, and fewer F2 hybrids and back-crosses to P. tremula, indicating a few introgressions but preference toward P. alba. When plastid haplotypes in parental species were distinct, P. × canescens carried the haplotypes of both parents, but showed significant linkage between intraspecific haplotype and nuclear genotypes at several microsatellite loci. Selection, rather than migration and assortative mating, might have contributed to such plastid-nuclear disequilibria. By removing later-generated hybrids carrying interspecific combinations of haplotype and nuclear genotypes, plastid-nuclear incompatibility has greatly limited the gene exchange between P. alba and P. tremula via backcrossing with hybrids, demonstrating a significant association between plastid haplotype and the proportion of nuclear admixture.

  5. Genome-wide Identification of TCP Family Transcription Factors from Populus euphratica and Their Involvement in Leaf Shape Regulation

    Science.gov (United States)

    Ma, Xiaodong; Ma, Jianchao; Fan, Di; Li, Chaofeng; Jiang, Yuanzhong; Luo, Keming

    2016-01-01

    Higher plants have been shown to experience a juvenile vegetative phase, an adult vegetative phase, and a reproductive phase during its postembryonic development and distinct lateral organ morphologies have been observed at the different development stages. Populus euphratica, commonly known as a desert poplar, has developed heteromorphic leaves during its development. The TCP family genes encode a group of plant-specific transcription factors involved in several aspects of plant development. In particular, TCPs have been shown to influence leaf size and shape in many herbaceous plants. However, whether these functions are conserved in woody plants remains unknown. In the present study, we carried out genome-wide identification of TCP genes in P. euphratica and P. trichocarpa, and 33 and 36 genes encoding putative TCP proteins were found, respectively. Phylogenetic analysis of the poplar TCPs together with Arabidopsis TCPs indicated a biased expansion of the TCP gene family via segmental duplications. In addition, our results have also shown a correlation between different expression patterns of several P. euphratica TCP genes and leaf shape variations, indicating their involvement in the regulation of leaf shape development. PMID:27605130

  6. Influence of Genotype, Environment, and Gypsy Moth Herbivory on Local and Systemic Chemical Defenses in Trembling Aspen (Populus tremuloides).

    Science.gov (United States)

    Rubert-Nason, Kennedy F; Couture, John J; Major, Ian T; Constabel, C Peter; Lindroth, Richard L

    2015-07-01

    Numerous studies have explored the impacts of intraspecific genetic variation and environment on the induction of plant chemical defenses by herbivory. Relatively few, however, have considered how those factors affect within-plant distribution of induced defenses. This work examined the impacts of plant genotype and soil nutrients on the local and systemic phytochemical responses of trembling aspen (Populus tremuloides) to defoliation by gypsy moth (Lymantria dispar). We deployed larvae onto foliage on individual tree branches for 15 days and then measured chemistry in leaves from: 1) branches receiving damage, 2) undamaged branches of insect-damaged trees, and 3) branches of undamaged control trees. The relationship between post-herbivory phytochemical variation and insect performance also was examined. Plant genotype, soil nutrients, and damage all influenced phytochemistry, with genotype and soil nutrients being stronger determinants than damage. Generally, insect damage decreased foliar nitrogen, increased levels of salicinoids and condensed tannins, but had little effect on levels of a Kunitz trypsin inhibitor, TI3. The largest damage-mediated tannin increases occurred in leaves on branches receiving damage, whereas the largest salicinoid increases occurred in leaves of adjacent, undamaged branches. Foliar nitrogen and the salicinoid tremulacin had the strongest positive and negative relationships, respectively, with insect growth. Overall, plant genetics and environment concomitantly influenced both local and systemic phytochemical responses to herbivory. These findings suggest that herbivory can contribute to phytochemical heterogeneity in aspen foliage, which may in turn influence future patterns of herbivory and nutrient cycling over larger spatial scales.

  7. Disentangling herbivore impacts on Populus tremuloides: a comparison of native ungulates and cattle in Canada's Aspen Parkland.

    Science.gov (United States)

    Bork, Edward W; Carlyle, Cameron N; Cahill, James F; Haddow, Rae E; Hudson, Robert J

    2013-11-01

    Ungulates impact woody species' growth and abundance but little is understood about the comparative impacts of different ungulate species on forest expansion in savanna environments. Replacement of native herbivore guilds with livestock [i.e., beef cattle (Bos taurus)] has been hypothesized as a factor facilitating trembling aspen (Populus tremuloides Michx.) encroachment into grasslands of the Northern Great Plains. We used a controlled herbivory study in the Parklands of western Canada to compare the impact of native ungulates and cattle on aspen saplings. Native ungulate treatments included a mixed species guild and sequences of herbivory by different ungulates [bison (Bison bison subsp. bison), elk (Cervus elaphus) then deer (Odocoileus hemionus); or deer, elk, then bison]. Herbivory treatments were replicated in three pastures, within which sets of 40 marked aspen saplings (aspen stand. Stems were assessed for mortality and incremental damage (herbivory, leader breakage, stem abrasion and trampling). Final mortality was greater with exposure to any type of herbivore, but remained similar between ungulate treatments. However, among all treatments, the growth of aspen was highest with exposure only to cattle. Herbivory of aspen was attributed primarily to elk within the native ungulate treatments, with other forms of physical damage, and ultimately sapling mortality, associated with exposure to bison. Overall, these results indicate that native ungulates, specifically elk and bison, have more negative impacts on aspen saplings and provide evidence that native and domestic ungulates can have different functional effects on woody plant dynamics in savanna ecosystems.

  8. Hydraulic conductivity and aquaporin transcription in roots of trembling aspen (Populus tremuloides) seedlings colonized by Laccaria bicolor.

    Science.gov (United States)

    Xu, Hao; Cooke, Janice E K; Kemppainen, Minna; Pardo, Alejandro G; Zwiazek, Janusz J

    2016-07-01

    Ectomycorrhizal fungi have been reported to increase root hydraulic conductivity (L pr) by altering apoplastic and plasma membrane intrinsic protein (PIP)-mediated cell-to-cell water transport pathways in associated roots, or to have little effect on root water transport, depending on the interacting species and imposed stresses. In this study, we investigated the water transport properties and PIP transcription in roots of aspen (Populus tremuloides) seedlings colonized by the wild-type strain of Laccaria bicolor and by strains overexpressing a major fungal water-transporting aquaporin JQ585595. Inoculation of aspen seedlings with L. bicolor resulted in about 30 % colonization rate of root tips, which developed dense mantle and the Hartig net that was restricted in the modified root epidermis. Transcript abundance of the aspen aquaporins PIP1;2, PIP2;1, and PIP2;2 decreased in colonized root tips. Root colonization by JQ585595-overexpressing strains had no significant impact on seedling shoot water potentials, gas exchange, or dry mass; however, it led to further decrease in transcript abundance of PIP1;2 and PIP2;3 and the significantly lower L pr than in non-inoculated roots. These results, taken together with our previous study that showed enhanced root water hydraulics of L. bicolor-colonized white spruce (Picea glauca), suggest that the impact of L. bicolor on root hydraulics varies by the ectomycorrhiza-associated tree species.

  9. The role of water channel proteins in facilitating recovery of leaf hydraulic conductance from water stress in Populus trichocarpa.

    Directory of Open Access Journals (Sweden)

    Joan Laur

    Full Text Available Gas exchange is constrained by the whole-plant hydraulic conductance (Kplant. Leaves account for an important fraction of Kplant and may therefore represent a major determinant of plant productivity. Leaf hydraulic conductance (Kleaf decreases with increasing water stress, which is due to xylem embolism in leaf veins and/or the properties of the extra-xylary pathway. Water flow through living tissues is facilitated and regulated by water channel proteins called aquaporins (AQPs. Here we assessed changes in the hydraulic conductance of Populus trichocarpa leaves during a dehydration-rewatering episode. While leaves were highly sensitive to drought, Kleaf recovered only 2 hours after plants were rewatered. Recovery of Kleaf was absent when excised leaves were bench-dried and subsequently xylem-perfused with a solution containing AQP inhibitors. We examined the expression patterns of 12 highly expressed AQP genes during a dehydration-rehydration episode to identify isoforms that may be involved in leaf hydraulic adjustments. Among the AQPs tested, several genes encoding tonoplast intrinsic proteins (TIPs showed large increases in expression in rehydrated leaves, suggesting that TIPs contribute to reversing drought-induced reductions in Kleaf. TIPs were localized in xylem parenchyma, consistent with a role in facilitating water exchange between xylem vessels and adjacent living cells. Dye uptake experiments suggested that reversible embolism formation in minor leaf veins contributed to the observed changes in Kleaf.

  10. Identification of microRNAs Involved in Regeneration of the Secondary Vascular System in Populus tomentosa Carr

    Science.gov (United States)

    Tang, Fang; Wei, Hairong; Zhao, Shutang; Wang, Lijuan; Zheng, Huanquan; Lu, Mengzhu

    2016-01-01

    Wood formation is a complex developmental process primarily controlled by a regulatory transcription network. MicroRNAs (miRNAs) can modulate the expression of target genes involved in plant growth and development by inducing mRNA degradation and translational repression. In this study, we used a model of secondary vascular system regeneration established in Populus tomentosa to harvest differentiating xylem tissues over time for high-throughput sequencing of small RNAs. Analysis of the sequencing data identified 209 known and 187 novel miRNAs during this regeneration process. Degradome sequencing analysis was then performed, revealing 157 and 75 genes targeted by 21 known and 30 novel miRNA families, respectively. Gene ontology enrichment of these target genes revealed that the targets of 15 miRNAs were enriched in the auxin signaling pathway, cell differentiation, meristem development, and pattern specification process. The major biological events during regeneration of the secondary vascular system included the sequential stages of vascular cambium initiation, formation, and differentiation stages in sequence. This study provides the basis for further analysis of these miRNAs to gain greater insight into their regulatory roles in wood development in trees. PMID:27303419

  11. Analysis on water potential of Populus euphratica oliv and its meaning in the lower reaches of Tarim River, Xinjiang

    Institute of Scientific and Technical Information of China (English)

    FU Aihong; CHEN Yaning; LI Weihong

    2006-01-01

    s Combined with materials measured on leaves water potential of Populus euphratica oliv in the process of ecological water delivery in the lower reaches of Tarim River, the influence of ground-water depths and soil salinity on leaves water potential of P.euphratica was analyzed. We found that there was evident negative correlation between the leaves water potential of P. euphratica and ground-water depths. The deeper the ground-water depths were,the lower the leaves water potential of P. euphratica was, the more serious drought stress P. euphratica suffered from. Besides, there was evident negative correlation between the soil salinity and the leaves water potential of P. euphratica. The bigger the soil salinity was, the lower the leaves water potential of P.euphratica was, the more serious drought stress was indicated from which P. euphratica suffered. For sections rather distant for Daxihaizi Reservoir as well as for those places of wells rather distant from the river course, ground-water depths and the soil salinity were high; the leaves water potential of P. euphratica was low. The leaves water potential of P. euphratica can reflect the degree at which P. euphratica suffers from drought and salt stress, and has an important reference meaning in analyzing proper ground-water depths for the survival and growth of P. euphratic in the lower reaches of Tarim River.

  12. Molecular evolution and expression divergence of the Populus euphratica Hsf genes provide insight into the stress acclimation of desert poplar

    Science.gov (United States)

    Zhang, Jin; Jia, Huixia; Li, Jianbo; Li, Yu; Lu, Mengzhu; Hu, Jianjun

    2016-01-01

    Heat shock transcription factor (Hsf) family is one of the most important regulators in the plant kingdom. Hsf has been demonstrated to be involved in various processes associated with plant growth, development as well as in response to hormone and abiotic stresses. In this study, we carried out a comprehensive analysis of Hsf family in desert poplar, Populus euphratica. Total of 32 genes encoding Hsf were identified and they were classified into three main classes (A, B, and C). Gene structure and conserved motif analyses indicated that the members in each class were relatively conserved. Total of 10 paralogous pairs were identified in PeuHsf family, in which nine pairs were generated by whole genome duplication events. Ka/Ks analysis showed that PeuHsfs underwent purifying selection pressure. In addition, various cis-acting elements involved in hormone and stress responses located in the promoter regions of PeuHsfs. Gene expression analysis indicated that several PeuHsfs were tissue-specific expression. Compared to Arabidopsis, more PeuHsf genes were significantly induced by heat, drought, and salt stresses (21, 19, and 22 PeuHsfs, respectively). Our findings are helpful in understanding the distinguished adaptability of P. euphratica to extreme environment and providing a basis for functional analysis of PeuHsfs in the future. PMID:27425424

  13. A comparative study of four approaches to assess phenology of Populus in a short-rotation coppice culture

    Directory of Open Access Journals (Sweden)

    Vanbeveren SPP

    2016-10-01

    Full Text Available We compared four approaches to assess phenology in a short-rotation coppice culture with 12 poplar (Populus genotypes. The four approaches quantified phenology at different spatial scales and with different temporal resolutions: (i visual observations of bud phenology; (ii measurements of leaf area index; (iii webcam images; and (iv satellite images. For validation purposes we applied the four approaches during two years: the year preceding a coppice event and the year following the coppice event. The delayed spring greenup and the faster canopy development in the year after coppicing (as compared to the year before coppicing were similarly quantified by the four approaches. The four approaches detected very similar seasonal changes in phenology, although they had different spatial scales and a different temporal resolution. The onset of autumn senescence after coppicing remained the same as in the year before coppicing according to the bud set observations, but it started earlier according to the webcam images, and later according to the MODIS images. In comparison to the year before coppicing, the growing season - in terms of leaf area duration - was shorter in the year after coppicing, while the leaf area index was higher.

  14. Induction of 2n female gametes in Populus adenopoda Maxim by high temperature exposure during female gametophyte development.

    Science.gov (United States)

    Lu, Min; Zhang, Pingdong; Kang, Xiangyang

    2013-03-01

    In order to produce triploid plants, 2n female gametes were induced by treating female buds and developing embryo sacs of Populus adenopoda Maxim with high temperature exposure. During megasporogenesis, tests were conducted on the relationship between female gametophyte development and morphological changes of female catkins. In the resulting progeny, 12 triploids were produced, and the highest rate of triploid production was 40%. Cytological observation revealed that the pachytene to diakinesis phase of meiotic stages may be a suitable period for inducing megaspore chromosome doubling through high temperature exposure. On the other hand, catkins of 6-72 h after pollination were treated for inducing embryo sac chromosome doubling. In the offspring seedlings, 51 triploids were detected and the highest efficiency of triploid production was 83.33%. Correlation analysis between the proportion of each embryo sac's developmental stage and the percentage of triploid production indicated that the second mitotic division may be the most effective stage for 2n female gamete induction. Our findings showed that high temperature exposure is an ideal method for 2n female gamete induction. Heterozygous offspring are valuable for breeding programs of P. adenopoda. PMID:23641186

  15. Elucidation of Xylem-Specific Transcription Factors and Absolute Quantification of Enzymes Regulating Cellulose Biosynthesis in Populus trichocarpa.

    Science.gov (United States)

    Loziuk, Philip L; Parker, Jennifer; Li, Wei; Lin, Chien-Yuan; Wang, Jack P; Li, Quanzi; Sederoff, Ronald R; Chiang, Vincent L; Muddiman, David C

    2015-10-01

    Cellulose, the main chemical polymer of wood, is the most abundant polysaccharide in nature.1 The ability to perturb the abundance and structure of cellulose microfibrils is of critical importance to the pulp and paper industry as well as for the textile, wood products, and liquid biofuels industries. Although much has been learned at the transcript level about the biosynthesis of cellulose, a quantitative understanding at the proteome level has yet to be established. The study described herein sought to identify the proteins directly involved in cellulose biosynthesis during wood formation in Populus trichocarpa along with known xylem-specific transcription factors involved in regulating these key proteins. Development of an effective discovery proteomic strategy through a combination of subcellular fractionation of stem differentiating xylem tissue (SDX) with recently optimized FASP digestion protocols, StageTip fractionation, as well as optimized instrument parameters for global proteomic analysis using the quadrupole-orbitrap mass spectrometer resulted in the deepest proteomic coverage of SDX protein from P. trichocarpa with 9,146 protein groups being identified (1% FDR). Of these, 20 cellulosic/hemicellulosic enzymes and 43 xylem-specific transcription factor groups were identified. Finally, selection of surrogate peptides led to an assay for absolute quantification of 14 cellulosic proteins in SDX of P. trichocarpa. PMID:26325666

  16. Eco-physiological response of Populus euphratica Oliv. to water release of the lower reaches of the Tarim River, China

    Science.gov (United States)

    Wang, Q.; Ruan, X.; Chen, Y. N.; Li, W. H.

    2007-10-01

    Eco-physiological and plant performance responses and acclimation of Populus euphratica Oliv. to water release of the lower reaches of Tarim River, China were investigated. Three representative areas and 15 transects were selected along the lower reaches of the Tarim River. The groundwater level and salt content as well as plant performance and the contents of proline, soluble sugar, and plant endogenous hormone (ABA, CTK) in leaves were monitored and analyzed before- and after-water release. The groundwater level was raised in different areas and transects by the water release program. The physiological stress to P. euphratica decreased after the water release. Our results suggested that the groundwater level in the studied region changed from -3.15 to -4.12 m, salt content of the groundwater from 67.15 to 72.65 mM, the proline content from 9.28 to 11.06 mM, the soluble sugar content from 224.71 to 252.16 mM, the ABA content from 3.59 to 5.01 ng/(g FW), and the CK content from 4.01 to 4.56 ng/(g FW)- for the optimum growth and recover of P. euphratica indicated by the plant performance parameters, and the efficiency of water release was the highest.

  17. [Hydraulic limitation on photosynthetic rate of old Populus simonii trees in sandy soil of north Shaanxi Province].

    Science.gov (United States)

    Zuo, Li-Xiang; Li, Yang-Yang; Chen, Jia-Cun

    2014-06-01

    'Old and dwarf trees' on the loess plateau region mainly occurred among mature trees rather than among small trees. To elucidate the mechanism of tree age on 'old and dwarf trees' formation, taking Populus simonii, a tree species that accounted for the largest portion of 'old and dwarf trees' on the loess plateau, as an example, the growth, photosynthesis and hydraulic traits of P. simonii trees with different ages (young: 13-15 years, mid-aged: 31-34 years, and old: 49-54 years) were measured. The results showed that the dieback length increased, and net photosynthetic rate, stomatal conductance, transpiration rate, and whole plant hydraulic conductance decreased significantly with the increasing tree age. Both net photosynthetic rate and stomatal conductance measured at different dates were significantly and positively related to the whole plant hydraulic conductance, suggesting that the decreasing photosynthetic rate of old trees was possibly caused by the declined hydraulic conductance. Although the resistance to cavitation in stems and leaves was stronger in old trees than in young and mid-aged trees, there were no differences in midday native stem embolization degree and leaf hydraulic conductance based on the vulnerability curve estimation, suggesting that the increased hydraulic resistance of the soil-root system is probably the most important reason for decreasing the whole plant hydraulic conductance of old trees.

  18. Prokaryotic expression analysis of an NBS-type PtDRGO1 gene isolated from Populus tomentosa Carr.

    Institute of Scientific and Technical Information of China (English)

    Yan LI; Qian ZHANG; Xing RAO; Haixia LI; Tingting LIU; Xinmin AN; Zhiyi ZHANG

    2009-01-01

    In order to investigate the protein features of an NBS gene (PtDRGOl, EF157840) isolated from Populus tomentosa Carr., the full-length open reading frame was fused into a prokaryotic expression vector pGEX-KG. PCR analysis and double endonuclease digestion showed that the recombinant vector was successfully constructed and transferred into an expression host E. coli strain XA90. It was indicated by SDS-PAGE analysis that IPTG treatment successfully induced the expression of a fusion protein of about 79 kD, which was consistent with the predicted value. In addition, the prokaryotic expression system was also optimized. The result suggests that lmmol/L IPTG treatment for 4h at 37 C was most effective, and the product was predominately soluble and not extra-cellular secreting. Moreover, the fusion protein was purified with an affinity chromatography column using Glutathione Sepharose 4B. This work will lay a foundation for further studies on biological functions of the PtDRGOl gene.

  19. Genome-wide Identification of TCP Family Transcription Factors from Populus euphratica and Their Involvement in Leaf Shape Regulation.

    Science.gov (United States)

    Ma, Xiaodong; Ma, Jianchao; Fan, Di; Li, Chaofeng; Jiang, Yuanzhong; Luo, Keming

    2016-01-01

    Higher plants have been shown to experience a juvenile vegetative phase, an adult vegetative phase, and a reproductive phase during its postembryonic development and distinct lateral organ morphologies have been observed at the different development stages. Populus euphratica, commonly known as a desert poplar, has developed heteromorphic leaves during its development. The TCP family genes encode a group of plant-specific transcription factors involved in several aspects of plant development. In particular, TCPs have been shown to influence leaf size and shape in many herbaceous plants. However, whether these functions are conserved in woody plants remains unknown. In the present study, we carried out genome-wide identification of TCP genes in P. euphratica and P. trichocarpa, and 33 and 36 genes encoding putative TCP proteins were found, respectively. Phylogenetic analysis of the poplar TCPs together with Arabidopsis TCPs indicated a biased expansion of the TCP gene family via segmental duplications. In addition, our results have also shown a correlation between different expression patterns of several P. euphratica TCP genes and leaf shape variations, indicating their involvement in the regulation of leaf shape development. PMID:27605130

  20. [Spatial distribution paittern of Populus euphratica and P. pruinosa1 clonal ramets in Ta.rim River Basin, China].

    Science.gov (United States)

    Zhao, Zheng-shuai; Zheng, Ya-qiong; Liang, Ji-ye; Han, Zhan-jiang; Li, Zhi-jun

    2016-02-01

    Spatial distribution pattern of Populus euphratica and P. pruinosa clonal ramets at three sites was studied, including natural mixed forest of P. euphratica and P. pruinosa in Awati County located in the downstream of Yarkant River, natural P. pruinosa forest in Group 16 of Nongyishi in the Tarim River upstream area, and natural P. euphratica forest in Luntai County located in the middle reach of the Tarim River. The clonal ramets of the three sites showed a cluster distribution pattern at eight sampling scales, i.e., 5 mx5 m, 5 mx10 m, 5 mx15 m, 10 mx10 m, 10 mx15 m, 15 mx15 m, 15 mx20 m, and 20 mX20 m. This pattern revealed that the cluster distribution was a basic property in the spatial distribution pattern of P. euphratica and P. pruinosa populations. At 5 mx5 m scale, negative binomial parameter was minimum, while Cassie index, patchiness inex and aggregation strength were maximum for the two ramet populations at the three sites. PMID:27396111

  1. Effect of nitrate and ammonium fertilization on Zn, Pb, and Cd phytostabilization by Populus euramericana Dorskamp in contaminated technosol.

    Science.gov (United States)

    Qasim, Bashar; Motelica-Heino, Mikael; Bourgerie, Sylvain; Gauthier, Arnaud; Morabito, Domenico

    2015-12-01

    This study aimed at assessing the effect of nitrogen addition under two forms, nitrate and ammonium, on the stabilization of Zn, Pb, and Cd by Populus euramericana Dorskamp grown in contaminated soils for 35 days under controlled conditions. Temporal changes in the soil pore water (SPW) were monitored for pH, dissolved organic carbon (DOC), and total dissolved concentrations of metals in the soils rhizosphere. Rhizospheric SPW pH decreased gradually with NH4(+) addition and increased with NO3(-) addition up to one unit, while it slightly decreased initially then increased for the untreated control soil DOC increased with time up to six times, the highest increase occurring with NH4(+) fertilization. An increase in the metal concentrations in the rhizospheric SPW was observed for NH4(+) addition associated with the lowest rhizospheric SPW pH, whereas the opposite was observed for the control soil and NO3(-) fertilization. Fertilization did not affect plant shoots or roots biomass development compared to the untreated control (without N addition). Metals were mostly accumulated in the rhizosphere and N fertilization increased the accumulation for Zn and Pb while Cd accumulation was enhanced for NH4(+) addition. Collectively, our results suggest metal stabilization by P. euramericana Dorskamp rhizosphere with nitrogen fertilization and are potential for phytostabilization of contaminated technosol.

  2. Energy sensitivity and variability analysis of Populus hybrid short-rotation plantations in northeastern United States. Final report

    Energy Technology Data Exchange (ETDEWEB)

    Bowersox, T.W.; Blankenhorn, P.R.

    1979-10-24

    Production of biomass by corn-like plantations has been demonstrated by a number of researchers. These forest analogs of agronomic cropping systems have the potential to yield substantially more biomass per unit area than traditional forests. Care is needed in choosing the appropriate sites, species, spacing, and harvesting strategies. Opportunities for increased yields have been suggested for fertilization and irrigation. Utilization of the biomass from these dense plantations for energy was the focus of this study. Although the amount of energy potential of the biomass is important, the energy output must be greater than the energy input for biomass to have a positive benefit to society. Further, in order to completely evaluate the net energy of the system it is necessary to examine the energy out-to-in ratios on the basis of usable energy (for example, usable heat, process steam and electricity), as well as all of the energies expended in producing, harvesting, transporting and processing the biomass. The objective of this study is to establish and analyze the energy inputs for selected management strategies in order to evaluate the sensitivity and variability of the energy inputs in the net energy analysis, and based on the net energy analysis to recommend a management strategy that minimizes energy inputs while maximizing biomass yield for short-rotation systems of Populus spp. in the northeastern United States.

  3. Determination of As in tree-rings of poplar (Populus alba L.) by U-shaped DC arc.

    Science.gov (United States)

    Marković, D M; Novović, I; Vilotić, D; Ignjatović, Lj

    2009-04-01

    An argon-stabilized U-shaped DC arc with a system for aerosol introduction was used for determination of As in poplar (Populus alba L.) tree-rings. After optimization of the operating parameters and selection of the most appropriate signal integration time (30 s), the limit of detection for As was reduced to 15.0 ng/mL. This detection limit obtained with the optimal integration time was compared with those for other methods: inductively coupled plasma-atomic emission spectrometry (ICP-AES), direct coupled plasma-atomic emission spectrometry (DCP-AES), microwave induced plasma-atomic emission spectrometry (MIP-AES) and improved thermospray flame furnace atomic absorption spectrometry (TS-FF-AAS). Arsenic is toxic trace element which can adversely affect plant, animal and human health. As an indicator of environment pollution we collected poplar tree-rings from two locations. The first area was close to the "Nikola Tesla" (TENT-A) power plant, Obrenovac, while the other was in the urban area of Novi Sad. In all cases elevated average concentrations of As were registered in poplar tree-rings from the Obrenovac location.

  4. Scientific Basis for Sustainable Management of Eucalyptus and Populus as Short-Rotation Woody Crops in the U.S.

    Directory of Open Access Journals (Sweden)

    Eric D. Vance

    2014-05-01

    Full Text Available Short rotation woody crops (SRWC, fast growing tree species that are harvested on short, repeated intervals, can augment traditional fiber sources. These crops have economic and environmental benefits stemming from their capability of supplying fiber on a reduced land base in close proximity to users and when sensitive sites cannot be accessed. Eucalyptus and Populus appear to be genera with the greatest potential to provide supplemental fiber in the U.S. Optimal productivity can be achieved through practices that overcome site limitations and by choosing the most appropriate sites, species, and clones. Some Eucalyptus species are potentially invasive, yet field studies across multiple continents suggest they are slower to disperse than predicted by risk assessments. Some studies have found lower plant and animal diversity in SRWC systems compared to mature, native forests, but greater than some alterative land uses and strongly influenced by stand management, land use history, and landscape context. Eucalyptus established in place of grasslands, arable lands, and, in some cases, native forests can reduce streamflow and lower water tables due to higher interception and transpiration rates but results vary widely, are scale dependent, and are most evident in drier regions.

  5. Genome-wide analysis of basic leucine zipper transcription factor families in Arabidopsis thaliana, Oryza saliva and Populus trichocarpa

    Institute of Scientific and Technical Information of China (English)

    JI Qian; ZHANG Liang-sheng; WANG Yi-fei; WANG Jian

    2009-01-01

    The basic leucine zipper (bZIP) transcription factors form a large gene family that is important in pathogen defense, light and stress signaling, etc. The Completed whole genome sequences of model plants Arabidopsis (Arabidopsis thaliana), rice (Oryza saliva) and poplar (Populus trichocarpa) constitute a valuable resource for genome-wide analysis and genomic comparative analysis, as they are representatives of the two major evolutionary lineages within the angiosperms: the monocotyledons and the dicotyledons. In this study, bioinformatics analysis identified 74, 89 and 88 bZIP genes respectively in Arabidopsis, rice and poplar. Moreover, a comprehensive overview of this gene family is presented, including the gene structure, phylogeny, chromosome distribution, conserved motifs. As a result, the plant bZIPs were organized into 10 subfamilies on basis of phylogenetic relationship. Gene duplication events during the family evolution history were also investigated. And it was further concluded that chromosomal/segmental duplication might have played a key role in gene expansion of bZIP gene family.

  6. Foliar Carbon Isotope Composition (δ13C) and Water Use Efficiency of Different Populus deltoids Clones Under Water Stress

    Institute of Scientific and Technical Information of China (English)

    Zhao Fengjun; Gao Rongfu; Shen Yingbai; Su Xiaohua; Zhang Bingyu

    2006-01-01

    Foliar carbon isotope composition (δ13C),total dry biomass,and long-term water use efficiency (WUEL)of 12 Populus deltoids clones were studied under water stress in a greenhouse.Total dry biomass of clones decreased greatly,while δ13C increased.Single-element variance analysis in the same water treatment indicated that WUEL difference among clones was significant.Clones J2,J6,J7,J8,and J9 were excellent with high WUEL.Extremely significant δ13C differences among water treatments and clones were revealed by two-element variance analysis.Water proved to be the primary factor affecting δ13C under water stress.It showed that there was a good positive correlation between δ13C and WUEL in the same water treatment,and that a high WUEL always coincided with a high δ13C.δ13C might be a reliable indirect index to estimate WUEL among P.deltoids clones.

  7. Sap Flow of Populus euphratica in a Desert Riparian Forest in an Extreme Arid Region During the Growing Season

    Institute of Scientific and Technical Information of China (English)

    Jian-Hua Si; Qi Feng; Xiao-You Zhang; Zong-Qiang Chang; Yong-Hong Su; Hai-Yang Xi

    2007-01-01

    In the present study, the heat pulse technique was applied to investigate the stem sap flow of Populus euphratica in a desert riparian forest in an extreme arid region from April to October 2003 and from May to October 2004. The experimental sites were in Qidaoqiao (101 °10'E, 41°59'N) and Bayantaolai farm (101°14'E, 42°01'N) in Ejina county, in the Iow reaches of the Heihe River, China. The results indicated that the diurnal change in the velocity of sap flow showed minor fluctuations. At night, the rising of sap flow could be observed in the main tree species because of root pressure. During the growing season, the maximum average velocity was observed in July, followed by August, and the same velocity was observed in September and May; the minimum velocity was observed in October. The transpiration from June to August during the growing season accounted for approximately 70% of the annual total transpiration. The sap flow velocity of P. euphratica trees of different ages could be arranged in the order: 15 yr > 25 yr > 50 yr. Sap flow velocity was closely related to changes in micrometeorological factors, with average sap flow velocity showing a significant linear correlation with net radiation, air temperature and relative humidity.

  8. Hydraulic conductivity and aquaporin transcription in roots of trembling aspen (Populus tremuloides) seedlings colonized by Laccaria bicolor.

    Science.gov (United States)

    Xu, Hao; Cooke, Janice E K; Kemppainen, Minna; Pardo, Alejandro G; Zwiazek, Janusz J

    2016-07-01

    Ectomycorrhizal fungi have been reported to increase root hydraulic conductivity (L pr) by altering apoplastic and plasma membrane intrinsic protein (PIP)-mediated cell-to-cell water transport pathways in associated roots, or to have little effect on root water transport, depending on the interacting species and imposed stresses. In this study, we investigated the water transport properties and PIP transcription in roots of aspen (Populus tremuloides) seedlings colonized by the wild-type strain of Laccaria bicolor and by strains overexpressing a major fungal water-transporting aquaporin JQ585595. Inoculation of aspen seedlings with L. bicolor resulted in about 30 % colonization rate of root tips, which developed dense mantle and the Hartig net that was restricted in the modified root epidermis. Transcript abundance of the aspen aquaporins PIP1;2, PIP2;1, and PIP2;2 decreased in colonized root tips. Root colonization by JQ585595-overexpressing strains had no significant impact on seedling shoot water potentials, gas exchange, or dry mass; however, it led to further decrease in transcript abundance of PIP1;2 and PIP2;3 and the significantly lower L pr than in non-inoculated roots. These results, taken together with our previous study that showed enhanced root water hydraulics of L. bicolor-colonized white spruce (Picea glauca), suggest that the impact of L. bicolor on root hydraulics varies by the ectomycorrhiza-associated tree species. PMID:26861480

  9. Cloning and RNAi Construction of a LEAFY Homologous Gene from Populus tomentosa and Preliminary Study in Tobacco

    Institute of Scientific and Technical Information of China (English)

    2005-01-01

    PtLFY, a LEAFY (LFY) gene, was cloned from Populus tomentosa (LM50) by PCR. Sequencing analysis indicated that PtLFY was 2 629 bp long, composed of three exons and two introns and encoded 378 amino acids. The splice donor sites and the splice acceptor sites were in identical positions to the LFY and its homologues. The amino acid sequence inferred was 68%-99% homologous to those of LFY and its homologues by blast analysis in GenBank. The Southern blot analysis indicated that there was a single copy of the PtLFY gene in genomic DNA of male and female P. tomentosa (LM50 and 5082). The pBI121-Ptalfy (reverse)-intron-Ptlfy-GUS-nos was constructed using RNA interference (RNAi) technique and verified by PCR and digestion identification and transformed into tobacco. Some transgenic tobacco plants were obtained by PCR and PCR-Southern identification. The growth was generally repressed in transgenic tobacco plants compared with wild-type ones and some phenotypic differences were observed.

  10. Comparative Physiological and Proteomic Analysis Reveals the Leaf Response to Cadmium-Induced Stress in Poplar (Populus yunnanensis.

    Directory of Open Access Journals (Sweden)

    Yunqiang Yang

    Full Text Available Excess amounts of heavy metals are important environmental pollutants with significant ecological and nutritional effects. Cdmium (Cd is of particular concern because of its widespread occurrence and high toxicity. We conducted physiological and proteomic analyses to improve our understanding of the responses of Populus yunnanensis to Cd stress. The plantlets experienced two apparent stages in their response to Cd stress. During the first stage, transiently induced defense-response molecules, photosynthesis- and energy-associated proteins, antioxidant enzymes and heat shock proteins (HSPs accumulated to enhance protein stability and establish a new cellular homeostasis. This activity explains why plant photosynthetic capability during this period barely changed. During the second stage, a decline of ribulose-1, 5-bisphosphate carboxylase (RuBisCO and HSP levels led to imbalance of the plant photosynthetic system. Additionally, the expression of Mitogen-activated protein kinase 3 (MPK3, Mitogen-activated protein kinase 6 (MPK6 and a homeobox-leucine zipper protein was higher in the second stage. Higher expression of caffeoyl-CoA O-methyltransferase (CCoAOMT may regulate plant cell wall synthesis for greater Cd storage. These genes may be candidates for further research and use in genetic manipulation of poplar tolerance to Cd stress.

  11. Molecular detection and drought resistance analysis of SacB-transgenic poplars (Populus alba ×P.glandulosa)

    Institute of Scientific and Technical Information of China (English)

    2008-01-01

    The propagation of drought-resistant transgenic poplars is one of the more effective ways to improve the ecological state of arid regions.The expression of SacB gene in transgenic lines of Populus alba × P.glandulosa was analyzed by a semi-quantitative RT-PCR.Drought resistance of these transgenic lines was evaluated by water stress trials in a greenhouse.Results showed that the mRNA transcription of SacB was found in all transgenic lines and fructan has accumulated in the leaves of these plants.The growth,biomass and leaf water content of some transgenic lines were significantly higher than those of the control plants under drought stress.Correlation analysis indicated that the said factors were significantly and positively related to the concentration of fructan in the leaves of the transgenic lines.Results revealed that the expression of SacB gene in transgenic poplars enhanced its resistance to water stress.

  12. Assessing the carbon sequestration potential of poplar and black locust short rotation coppices on mine reclamation sites in Eastern Germany - Model development and application.

    Science.gov (United States)

    Quinkenstein, A; Jochheim, H

    2016-03-01

    In the temperate zone short rotation coppice systems for the production of woody biomass (SRC) have gained great interest as they offer a pathway to both sustainable bioenergy production and the potential sequestration of CO2 within the biomass and the soil. This study used the carbon model SHORTCAR to assess the carbon cycle of a poplar (Populus suaveolens Fisch. x Populus trichocarpa Torr. et Gray cv. Androscoggin) and a black locust (Robinia pseudoacacia L.) SRC. The model was calibrated using data from established SRC plantations on reclaimed mine sites in northeast Germany and validated through the determination of uncertainty ranges of selected model parameters and a sensitivity analysis. In addition to a 'reference scenario', representing the actual site conditions, 7 hypothetical scenarios, which varied in climate conditions, rotation intervals, runtimes, and initial soil organic carbon (SOC) stocks, were defined for each species. Estimates of carbon accumulation within the biomass, the litter layer, and the soil were compared to field data and previously published results. The model was sensitive to annual stem growth and initial soil organic carbon stocks. In the reference scenario net biome production for SRC on reclaimed sites in Lusatia, Germany amounted to 64.5 Mg C ha(-1) for R. pseudoacacia and 8.9 Mg C ha(-1) for poplar, over a period of 36 years. These results suggest a considerable potential of SRC for carbon sequestration at least on marginal sites.

  13. Prisons of light : black holes

    Science.gov (United States)

    Ferguson, Kitty

    What is a black hole? Could we survive a visit to one -- perhaps even venture inside? Have we yet discovered any real black holes? And what do black holes teach us about the mysteries of our Universe? These are just a few of the tantalizing questions examined in this tour-de-force, jargon-free review of one of the most fascinating topics in modern science. In search of the answers, we trace a star from its birth to its death throes, take a hypothetical journey to the border of a black hole and beyond, spend time with some of the world's leading theoretical physicists and astronomers, and take a whimsical look at some of the wild ideas black holes have inspired. Prisons of Light - Black Holes is comprehensive and detailed. Yet Kitty Ferguson's lightness of touch and down-to-earth analogies set this book apart from all others on black holes and make it a wonderfully stimulating and entertaining read.

  14. Point mass Cosmological Black Holes

    CERN Document Server

    Firouzjaee, Javad T

    2016-01-01

    Real black holes in the universe are located in the expanding accelerating background which are called the cosmological black holes. Hence, it is necessary to model these black holes in the cosmological background where the dark energy is the dominant energy. In this paper, we argue that most of the dynamical cosmological black holes can be modeled by point mass cosmological black holes. Considering the de Sitter background for the accelerating universe, we present the point mass cosmological background in the cosmological de Sitter space time. Our work also includes the point mass black holes which have charge and angular momentum. We study the mass, horizons, redshift structure and geodesics properties for these black holes.

  15. Philosophical Issues of Black Holes

    CERN Document Server

    Romero, Gustavo E

    2014-01-01

    Black holes are extremely relativistic objects. Physical processes around them occur in a regime where the gravitational field is extremely intense. Under such conditions, our representations of space, time, gravity, and thermodynamics are pushed to their limits. In such a situation philosophical issues naturally arise. In this chapter I review some philosophical questions related to black holes. In particular, the relevance of black holes for the metaphysical dispute between presentists and eternalists, the origin of the second law of thermodynamics and its relation to black holes, the problem of information, black holes and hypercomputing, the nature of determinisim, and the breakdown of predictability in black hole space-times. I maintain that black hole physics can be used to illuminate some important problems in the border between science and philosophy, either epistemology and ontology.

  16. Black Holes and Fourfolds

    CERN Document Server

    Bena, Iosif; Vercnocke, Bert

    2012-01-01

    We establish the relation between the structure governing supersymmetric and non-supersymmetric four- and five-dimensional black holes and multicenter solutions and Calabi-Yau flux compactifications of M-theory and type IIB string theory. We find that the known BPS and almost-BPS multicenter black hole solutions can be interpreted as GKP compactifications with (2,1) and (0,3) imaginary self-dual flux. We also show that the most general GKP compactification leads to new classes of BPS and non-BPS multicenter solutions. We explore how these solutions fit into N=2 truncations, and elucidate how supersymmetry becomes camouflaged. As a necessary tool in our exploration we show how the fields in the largest N=2 truncation fit inside the six-torus compactification of eleven-dimensional supergravity.

  17. Shape of black holes

    CERN Document Server

    Clement, María E Gabach

    2015-01-01

    It is well known that celestial bodies tend to be spherical due to gravity and that rotation produces deviations from this sphericity. We discuss what is known and expected about the shape of black holes' horizons from their formation to their final, stationary state. We present some recent results showing that black hole rotation indeed manifests in the widening of their central regions, limits their global shapes and enforces their whole geometry to be close to the extreme Kerr horizon geometry at almost maximal rotation speed. The results depend only on the horizon area and angular momentum. In particular they are entirely independent of the surrounding geometry of the spacetime and of the presence of matter satisfying the strong energy condition. We also discuss the the relation of this result with the Hoop conjecture.

  18. Presentism meets black holes

    CERN Document Server

    Romero, Gustavo E

    2014-01-01

    Presentism is, roughly, the metaphysical doctrine that maintains that whatever exists, exists in the present. The compatibility of presentism with the theories of special and general relativity was much debated in recent years. It has been argued that at least some versions of presentism are consistent with time-orientable models of general relativity. In this paper we confront the thesis of presentism with relativistic physics, in the strong gravitational limit where black holes are formed. We conclude that the presentist position is at odds with the existence of black holes and other compact objects in the universe. A revision of the thesis is necessary, if it is intended to be consistent with the current scientific view of the universe.

  19. Asymmetric black dyonic holes

    Directory of Open Access Journals (Sweden)

    I. Cabrera-Munguia

    2015-04-01

    Full Text Available A 6-parametric asymptotically flat exact solution, describing a two-body system of asymmetric black dyons, is studied. The system consists of two unequal counterrotating Kerr–Newman black holes, endowed with electric and magnetic charges which are equal but opposite in sign, separated by a massless strut. The Smarr formula is generalized in order to take into account their contribution to the mass. The expressions for the horizon half-length parameters σ1 and σ2, as functions of the Komar parameters and of the coordinate distance, are displayed, and the thermodynamic properties of the two-body system are studied. Furthermore, the seven physical parameters satisfy a simple algebraic relation which can be understood as a dynamical scenario, in which the physical properties of one body are affected by the ones of the other body.

  20. Black-hole astrophysics

    Energy Technology Data Exchange (ETDEWEB)

    Bender, P. [Univ. of Colorado, Boulder, CO (United States); Bloom, E. [Stanford Linear Accelerator Center, Menlo Park, CA (United States); Cominsky, L. [Sonoma State Univ., Rohnert Park, CA (United States). Dept. of Physics and Astronomy] [and others

    1995-07-01

    Black-hole astrophysics is not just the investigation of yet another, even if extremely remarkable type of celestial body, but a test of the correctness of the understanding of the very properties of space and time in very strong gravitational fields. Physicists` excitement at this new prospect for testing theories of fundamental processes is matched by that of astronomers at the possibility to discover and study a new and dramatically different kind of astronomical object. Here the authors review the currently known ways that black holes can be identified by their effects on their neighborhood--since, of course, the hole itself does not yield any direct evidence of its existence or information about its properties. The two most important empirical considerations are determination of masses, or lower limits thereof, of unseen companions in binary star systems, and measurement of luminosity fluctuations on very short time scales.

  1. Black Holes and Firewalls

    Science.gov (United States)

    Polchinski, Joseph

    2015-04-01

    Our modern understanding of space, time, matter, and even reality itself arose from the three great revolutions of the early twentieth century: special relativity, general relativity, and quantum mechanics. But a century later, this work is unfinished. Many deep connections have been discovered, but the full form of a unified theory incorporating all three principles is not known. Thought experiments and paradoxes have often played a key role in figuring out how to fit theories together. For the unification of general relativity and quantum mechanics, black holes have been an important arena. I will talk about the quantum mechanics of black holes, the information paradox, and the latest version of this paradox, the firewall. The firewall points to a conflict between our current theories of spacetime and of quantum mechanics. It may lead to a new understanding of how these are connected, perhaps based on quantum entanglement.

  2. Noncommutative Black Holes

    CERN Document Server

    Bastos, C; Dias, N C; Prata, J N

    2010-01-01

    One considers phase-space noncommutativity in the context of a Kantowski-Sachs cosmological model to study the interior of a Schwarzschild black hole. It is shown that the potential function of the corresponding quantum cosmology problem has a local minimum. One deduces the thermodynamics and show that the Hawking temperature and entropy exhibit an explicit dependence on the momentum noncommutativity regime and it is shown that the wave function vanishes in this limit.

  3. Noncommutative Solitonic Black Hole

    OpenAIRE

    Chang-Young, Ee; Kimm, Kyoungtae; Lee, Daeho; Lee, Youngone

    2011-01-01

    We investigate solitonic black hole solutions in three dimensional noncommutative spacetime. We do this in gravity with negative cosmological constant coupled to a scalar field. Noncommutativity is realized with the Moyal product which is expanded up to first order in the noncommutativity parameter in two spatial directions. With numerical simulation we study the effect of noncommutativity by increasing the value of the noncommutativity parameter starting from commutative solutions. We find t...

  4. Black Friday = Broget Branding?

    DEFF Research Database (Denmark)

    Hansen, Heidi

    2015-01-01

    ? Essensen ved Black Friday er lave priser, og det er der ved første øjekast ikke mange brandingmuligheder forbundet ved, hvis man forstår branding som en måde at skabe ekstra værdi omkring sit produkt eller sin virksomhed. Som brand bliver man dog alligevel nødt til at forholde sig til konceptet, da det er...

  5. Slowly balding black holes

    CERN Document Server

    Lyutikov, Maxim

    2011-01-01

    The "no hair" theorem, a key result in General Relativity, states that an isolated black hole is defined by only three parameters: mass, angular momentum, and electric charge; this asymptotic state is reached on a light-crossing time scale. We find that the "no hair" theorem is not formally applicable for black holes formed from collapse of a rotating neutron star. Rotating neutron stars can self-produce particles via vacuum breakdown forming a highly conducting plasma magnetosphere such that magnetic field lines are effectively "frozen-in" the star both before and during collapse. In the limit of no resistivity, this introduces a topological constraint which prohibits the magnetic field from sliding off the newly-formed event horizon. As a result, during collapse of a neutron star into a black hole, the latter conserves the number of magnetic flux tubes $N_B = e \\Phi_\\infty /(\\pi c \\hbar)$, where $\\Phi_\\infty \\approx 2 \\pi^2 B_{NS} R_{NS}^3 /(P_{\\rm NS} c)$ is the initial magnetic flux through the hemisphere...

  6. Thermal corpuscular black holes

    Science.gov (United States)

    Casadio, Roberto; Giugno, Andrea; Orlandi, Alessio

    2015-06-01

    We study the corpuscular model of an evaporating black hole consisting of a specific quantum state for a large number N of self-confined bosons. The single-particle spectrum contains a discrete ground state of energy m (corresponding to toy gravitons forming the black hole), and a gapless continuous spectrum (to accommodate for the Hawking radiation with energy ω >m ). Each constituent is in a superposition of the ground state and a Planckian distribution at the expected Hawking temperature in the continuum. We first find that, assuming the Hawking radiation is the leading effect of the internal scatterings, the corresponding N -particle state can be collectively described by a single-particle wave function given by a superposition of a total ground state with energy M =N m and a Planckian distribution for E >M at the same Hawking temperature. From this collective state, we compute the partition function and obtain an entropy which reproduces the usual area law with a logarithmic correction precisely related with the Hawking component. By means of the horizon wave function for the system, we finally show the backreaction of modes with ω >m reduces the Hawking flux. Both corrections, to the entropy and to the Hawking flux, suggest the evaporation properly stops for vanishing mass, if the black hole is in this particular quantum state.

  7. Moulting Black Holes

    CERN Document Server

    Bena, Iosif; de Boer, Jan; El-Showk, Sheer; Shigemori, Masaki

    2011-01-01

    We find a family of novel supersymmetric phases of the D1-D5 CFT, which in certain ranges of charges have more entropy than all known ensembles. We also find bulk BPS configurations that exist in the same range of parameters as these phases, and have more entropy than a BMPV black hole; they can be thought of as coming from a BMPV black hole shedding a "hair" condensate outside of the horizon. The entropy of the bulk configurations is smaller than that of the CFT phases, which indicates that some of the CFT states are lifted at strong coupling. Neither the bulk nor the boundary phases are captured by the elliptic genus, which makes the coincidence of the phase boundaries particularly remarkable. Our configurations are supersymmetric, have non-Cardy-like entropy, and are the first instance of a black hole entropy enigma with a controlled CFT dual. Furthermore, contrary to common lore, these objects exist in a region of parameter space (between the "cosmic censorship bound" and the "unitarity bound") where no b...

  8. Attractors in Black

    CERN Document Server

    Bellucci, S; Marrani, A

    2008-01-01

    We review recent results in the study of attractor horizon geometries (with non-vanishing Bekenstein-Hawking entropy) of dyonic extremal d=4 black holes in supergravity. We focus on N=2, d=4 ungauged supergravity coupled to a number n_{V} of Abelian vector multiplets, outlining the fundamentals of the special Kaehler geometry of the vector multiplets' scalar manifold (of complex dimension n_{V}), and studying the 1/2-BPS attractors, as well as the non-BPS (non-supersymmetric) ones with non-vanishing central charge. For symmetric special Kaehler geometries, we present the complete classification of the orbits in the symplectic representation of the classical U-duality group (spanned by the black hole charge configuration supporting the attractors), as well as of the moduli spaces of non-BPS attractors (spanned by the scalars which are not stabilized at the black hole event horizon). Finally, we report on an analogous classification for N>2-extended, d=4 ungauged supergravities, in which also the 1/N-BPS attrac...

  9. Black silicon solar cells with black bus-bar strings

    DEFF Research Database (Denmark)

    Davidsen, Rasmus Schmidt; Tang, Peter Torben; Mizushima, Io;

    2016-01-01

    We present the combination of black silicon texturing and blackened bus-bar strings as a potential method for obtaining all-black solar panels, while using conventional, front-contacted solar cells. Black silicon was realized by maskless reactive ion etching resulting in total, average reflectance...... below 0.5% across a 156x156 mm2 silicon wafer. Four different methods to obtain blackened bus-bar strings were compared with respect to reflectance, and two of these methods (i.e., oxidized copper and etched solder) were used to fabricate functional allblack solar 9-cell panels. The black bus-bars (e.......g., by oxidized copper) have a reflectance below 3% in the entire visible wavelength range. The combination of black silicon cells and blackened bus-bars results in aesthetic, all-black panels based on conventional, front-contacted solar cells without compromising efficiency....

  10. Non-Abelian magnetic black strings versus black holes

    Science.gov (United States)

    Mazharimousavi, S. Habib; Halilsoy, M.

    2016-05-01

    We present d+1 -dimensional pure magnetic Yang-Mills (YM) black strings (or 1-branes) induced by the d -dimensional Einstein-Yang-Mills-Dilaton black holes. The Born-Infeld version of the YM field makes our starting point which goes to the standard YM field through a limiting procedure. The lifting from black holes to black strings (with less number of fields) is done by adding an extra, compact coordinate. This amounts to the change of horizon topology from S^{d-2} to a product structure. Our black string in 5 dimensions is a rather special one, with uniform Hawking temperature and non-asymptotically flat structure. As the YM charge becomes large the string gets thinner to tend into a breaking point and transform into a 4-dimensional black hole.

  11. How Black Are Black Hole Candidates?

    CERN Document Server

    Robertson, S L; Robertson, Stanley L.; Leiter, Darryl J.

    2002-01-01

    In previous work we found that many of the spectral properties of x-ray binaries, including both galactic black hole candiates (GBHC) and neutron stars, were consistent with the existence of intrinsically magnetized central objects. Here we review and extend the observational evidence for the existence of intrinsically magnetized GBHC and show that their existence is consistent with a new class of solutions of the Einstein field equations of General Relativity. These solutions are based on a strict adherence to the Principle of Equivalence, which prevents the time-like geodesics of physical matter from becoming null on trapped surfaces of infinite red shift. The new solutions emerge from the fact that the structure and radiation transfer properties of the energy-momentum tensor on the right hand side of the Einstein field equations must have a form that is consistent with this Principle of Equivalence requirement. In this context, we show that the Einstein field equations allow the existence of highly red shi...

  12. Abaxial Greening Phenotype in Hybrid Aspen.

    Science.gov (United States)

    Nowak, Julia S; Douglas, Carl J; Cronk, Quentin C B

    2013-04-24

    The typical angiosperm leaf, as in Arabidopsis, is bifacial consisting of top (adaxial) and bottom (abaxial) surfaces readily distinguishable by the underlying cell type (palisade and spongy mesophyll, respectively). Species of the genus Populus have leaves that are either conventionally bifacial or isobilateral. Isobilateral leaves have palisade mesophyll on the top and bottom of the leaf, making the two sides virtually indistinguishable at the macroscopic level. In poplars this has been termed the "abaxial greening" phenotype. Previous work has implicated ASYMMETRIC LEAVES1 (AS1) as an essential determinant of palisade mesophyll development. This gene, as well as other genes (84 in all) putatively involved in setting the dorsiventral axis of leaves, were investigated in two Populus species: black cottonwood (Populus trichocarpa) and hybrid aspen (P. tremula x tremuloides), representative of each leaf type (bifacial and isobilateral, respectively). Poplar orthologs of AS1 have significantly higher expression in aspen leaf blade and lower in the petiole, suggestive of a potential role in the isobilateral leaf phenotype consistent with the previously observed phenotypes. Furthermore, an ABERRANT TESTA SHAPE (ATS) ortholog has significantly lower expression in aspen leaf tissue, also suggesting a possible contribution of this gene to abaxial greening.

  13. Abaxial Greening Phenotype in Hybrid Aspen

    Directory of Open Access Journals (Sweden)

    Julia S. Nowak

    2013-04-01

    Full Text Available The typical angiosperm leaf, as in Arabidopsis, is bifacial consisting of top (adaxial and bottom (abaxial surfaces readily distinguishable by the underlying cell type (palisade and spongy mesophyll, respectively. Species of the genus Populus have leaves that are either conventionally bifacial or isobilateral. Isobilateral leaves have palisade mesophyll on the top and bottom of the leaf, making the two sides virtually indistinguishable at the macroscopic level. In poplars this has been termed the “abaxial greening” phenotype. Previous work has implicated ASYMMETRIC LEAVES1 (AS1 as an essential determinant of palisade mesophyll development. This gene, as well as other genes (84 in all putatively involved in setting the dorsiventral axis of leaves, were investigated in two Populus species: black cottonwood (Populus trichocarpa and hybrid aspen (P. tremula x tremuloides, representative of each leaf type (bifacial and isobilateral, respectively. Poplar orthologs of AS1 have significantly higher expression in aspen leaf blade and lower in the petiole, suggestive of a potential role in the isobilateral leaf phenotype consistent with the previously observed phenotypes. Furthermore, an ABERRANT TESTA SHAPE (ATS ortholog has significantly lower expression in aspen leaf tissue, also suggesting a possible contribution of this gene to abaxial greening.

  14. Black Swan Tropical Cyclones

    Science.gov (United States)

    Emanuel, K.; Lin, N.

    2012-12-01

    Virtually all assessments of tropical cyclone risk are based on historical records, which are limited to a few hundred years at most. Yet stronger TCs may occur in the future and at places that have not been affected historically. Such events lie outside the realm of historically based expectations and may have extreme impacts. Their occurrences are also often made explainable after the fact (e.g., Hurricane Katrina). We nickname such potential future TCs, characterized by rarity, extreme impact, and retrospective predictability, "black swans" (Nassim Nicholas Taleb, 2007). As, by definition, black swan TCs have yet to happen, statistical methods that solely rely on historical track data cannot predict their occurrence. Global climate models lack the capability to predict intense storms, even with a resolution as high as 14 km (Emanuel et al. 2010). Also, most dynamic downscaling methods (e.g., Bender et al. 2010) are still limited in horizontal resolution and are too expensive to implement to generate enough events to include rare ones. In this study, we apply a simpler statistical/deterministic hurricane model (Emanuel et al. 2006) to simulate large numbers of synthetic storms under a given (observed or projected) climate condition. The method has been shown to generate realistic extremes in various basins (Emanuel et al. 2008 and 2010). We also apply a hydrodynamic model (ADCIRC; Luettich et al. 1992) to simulate the storm surges generated by these storms. We then search for black swan TCs, in terms of the joint wind and surge damage potential, in the generated large databases. Heavy rainfall is another important TC hazard and will be considered in a future study. We focus on three areas: Tampa Bay in the U.S., the Persian Gulf, and Darwin in Australia. Tampa Bay is highly vulnerable to storm surge as it is surrounded by shallow water and low-lying lands, much of which may be inundated by a storm tide of 6 m. High surges are generated by storms with a broad

  15. A novel bHLH transcription factor PebHLH35 from Populus euphratica confers drought tolerance through regulating stomatal development, photosynthesis and growth in Arabidopsis

    International Nuclear Information System (INIS)

    Highlights: • PebHLH35 is firstly cloned from Populus euphratica and characterized its functions. • PebHLH35 is important for earlier seedling establishment and vegetative growth. • PebHLH35 enhances tolerance to drought by regulating growth. • PebHLH35 enhances tolerance to drought by regulating stomatal development. • PebHLH35 enhances tolerance to drought by regulating photosynthesis and transpiration. - Abstract: Plant basic helix-loop-helix (bHLH) transcription factors (TFs) are involved in a variety of physiological processes including the regulation of plant responses to various abiotic stresses. However, few drought-responsive bHLH family members in Populus have been reported. In this study, a novel bHLH gene (PebHLH35) was cloned from Populus euphratica. Expression analysis in P. euphratica revealed that PebHLH35 was induced by drought and abscisic acid. Subcellular localization studies using a PebHLH35-GFP fusion showed that the protein was localized to the nucleus. Ectopic overexpression of PebHLH35 in Arabidopsis resulted in a longer primary root, more leaves, and a greater leaf area under well-watered conditions compared with vector control plants. Notably, PebHLH35 overexpression lines showed enhanced tolerance to water-deficit stress. This finding was supported by anatomical and physiological analyses, which revealed a reduced stomatal density, stomatal aperture, transpiration rate, and water loss, and a higher chlorophyll content and photosynthetic rate. Our results suggest that PebHLH35 functions as a positive regulator of drought stress responses by regulating stomatal density, stomatal aperture, photosynthesis and growth

  16. The Populus superoxide dismutase gene family and its responses to drought stress in transgenic poplar overexpressing a pine cytosolic glutamine synthetase (GS1a.

    Directory of Open Access Journals (Sweden)

    Juan Jesús Molina-Rueda

    Full Text Available BACKGROUND: Glutamine synthetase (GS plays a central role in plant nitrogen assimilation, a process intimately linked to soil water availability. We previously showed that hybrid poplar (Populus tremula X alba, INRA 717-1B4 expressing ectopically a pine cytosolic glutamine synthetase gene (GS1a display enhanced tolerance to drought. Preliminary transcriptome profiling revealed that during drought, members of the superoxide dismutase (SOD family were reciprocally regulated in GS poplar when compared with the wild-type control, in all tissues examined. SOD was the only gene family found to exhibit such patterns. RESULTS: In silico analysis of the Populus genome identified 12 SOD genes and two genes encoding copper chaperones for SOD (CCSs. The poplar SODs form three phylogenetic clusters in accordance with their distinct metal co-factor requirements and gene structure. Nearly all poplar SODs and CCSs are present in duplicate derived from whole genome duplication, in sharp contrast to their predominantly single-copy Arabidopsis orthologs. Drought stress triggered plant-wide down-regulation of the plastidic copper SODs (CSDs, with concomitant up-regulation of plastidic iron SODs (FSDs in GS poplar relative to the wild type; this was confirmed at the activity level. We also found evidence for coordinated down-regulation of other copper proteins, including plastidic CCSs and polyphenol oxidases, in GS poplar under drought conditions. CONCLUSIONS: Both gene duplication and expression divergence have contributed to the expansion and transcriptional diversity of the Populus SOD/CCS families. Coordinated down-regulation of major copper proteins in drought-tolerant GS poplars supports the copper cofactor economy model where copper supply is preferentially allocated for plastocyanins to sustain photosynthesis during drought. Our results also extend previous findings on the compensatory regulation between chloroplastic CSDs and FSDs, and suggest that this

  17. A novel bHLH transcription factor PebHLH35 from Populus euphratica confers drought tolerance through regulating stomatal development, photosynthesis and growth in Arabidopsis

    Energy Technology Data Exchange (ETDEWEB)

    Dong, Yan [College of Biological Sciences and Technology, National Engineering Laboratory for Tree Breeding, Beijing Forestry University, Beijing 100083 (China); Liaoning Forestry Vocational-Technical College, Shenyang 110101 (China); Wang, Congpeng; Han, Xiao; Tang, Sha; Liu, Sha [College of Biological Sciences and Technology, National Engineering Laboratory for Tree Breeding, Beijing Forestry University, Beijing 100083 (China); Xia, Xinli, E-mail: xiaxl@bjfu.edu.cn [College of Biological Sciences and Technology, National Engineering Laboratory for Tree Breeding, Beijing Forestry University, Beijing 100083 (China); Yin, Weilun, E-mail: yinwl@bjfu.edu.cn [College of Biological Sciences and Technology, National Engineering Laboratory for Tree Breeding, Beijing Forestry University, Beijing 100083 (China)

    2014-07-18

    Highlights: • PebHLH35 is firstly cloned from Populus euphratica and characterized its functions. • PebHLH35 is important for earlier seedling establishment and vegetative growth. • PebHLH35 enhances tolerance to drought by regulating growth. • PebHLH35 enhances tolerance to drought by regulating stomatal development. • PebHLH35 enhances tolerance to drought by regulating photosynthesis and transpiration. - Abstract: Plant basic helix-loop-helix (bHLH) transcription factors (TFs) are involved in a variety of physiological processes including the regulation of plant responses to various abiotic stresses. However, few drought-responsive bHLH family members in Populus have been reported. In this study, a novel bHLH gene (PebHLH35) was cloned from Populus euphratica. Expression analysis in P. euphratica revealed that PebHLH35 was induced by drought and abscisic acid. Subcellular localization studies using a PebHLH35-GFP fusion showed that the protein was localized to the nucleus. Ectopic overexpression of PebHLH35 in Arabidopsis resulted in a longer primary root, more leaves, and a greater leaf area under well-watered conditions compared with vector control plants. Notably, PebHLH35 overexpression lines showed enhanced tolerance to water-deficit stress. This finding was supported by anatomical and physiological analyses, which revealed a reduced stomatal density, stomatal aperture, transpiration rate, and water loss, and a higher chlorophyll content and photosynthetic rate. Our results suggest that PebHLH35 functions as a positive regulator of drought stress responses by regulating stomatal density, stomatal aperture, photosynthesis and growth.

  18. Geometry of black hole spacetimes

    CERN Document Server

    Andersson, Lars; Blue, Pieter

    2016-01-01

    These notes, based on lectures given at the summer school on Asymptotic Analysis in General Relativity, collect material on the Einstein equations, the geometry of black hole spacetimes, and the analysis of fields on black hole backgrounds. The Kerr model of a rotating black hole in vacuum is expected to be unique and stable. The problem of proving these fundamental facts provides the background for the material presented in these notes. Among the many topics which are relevant for the uniqueness and stability problems are the theory of fields on black hole spacetimes, in particular for gravitational perturbations of the Kerr black hole, and more generally, the study of nonlinear field equations in the presence of trapping. The study of these questions requires tools from several different fields, including Lorentzian geometry, hyperbolic differential equations and spin geometry, which are all relevant to the black hole stability problem.

  19. Hidden Structures of Black Holes

    CERN Document Server

    Vercnocke, Bert

    2010-01-01

    This thesis investigates two main topics concerning black holes in extensions of general relativity inspired by string theory. First, the structure of the equations of motion underlying black hole solutions is considered, in theories of D-dimensional gravity coupled to scalars and vectors. For solutions preserving supersymmetry, the equations of motion have a dramatic simplification: they become first-order instead of the second-order equations one would expect. Recently, it was found that this is a feature some non-supersymmetric black hole solutions exhibit as well. We investigate if this holds more generally, by examining what the conditions are to have first-order equations for the scalar fields of non-supersymmetric black holes, that mimic the form of their supersymmetric counterparts. This is illustrated in examples. Second, the structure of black holes themselves is investigated. String theory has been successful in explaining the Bekenstein-Hawking entropy for (mainly supersymmetric) black holes from ...

  20. Small black holes on cylinders

    International Nuclear Information System (INIS)

    We find the metric of small black holes on cylinders, i.e. neutral and static black holes with a small mass in d-dimensional Minkowski space times a circle. The metric is found using an ansatz for black holes on cylinders proposed in J. High Energy Phys. 05, 032 (2002). We use the new metric to compute corrections to the thermodynamics which is seen to deviate from that of the (d+1)-dimensional Schwarzschild black hole. Moreover, we compute the leading correction to the relative binding energy which is found to be non-zero. We discuss the consequences of these results for the general understanding of black holes and we connect the results to the phase structure of black holes and strings on cylinders

  1. Black Hole's 1/N Hair

    CERN Document Server

    Dvali, Gia

    2013-01-01

    According to the standard view classically black holes carry no hair, whereas quantum hair is at best exponentially weak. We show that suppression of hair is an artifact of the semi-classical treatment and that in the quantum picture hair appears as an inverse mass-square effect. Such hair is predicted in the microscopic quantum description in which a black hole represents a self-sustained leaky Bose-condensate of N soft gravitons. In this picture the Hawking radiation is the quantum depletion of the condensate. Within this picture we show that quantum black hole physics is fully compatible with continuous global symmetries and that global hair appears with the strength B/N, where B is the global charge swallowed by the black hole. For large charge this hair has dramatic effect on black hole dynamics. Our findings can have interesting astrophysical consequences, such as existence of black holes with large detectable baryonic and leptonic numbers.

  2. Study on the Cause of Leaf Etiolation Virus of Populus tomentosa'Huaye'%花叶毛白杨叶片致黄因子的病毒学研究

    Institute of Scientific and Technical Information of China (English)

    石进朝; 张殿朋; 淮稳霞

    2011-01-01

    为了探索花叶毛白杨的花叶形成因子,以花叶毛白杨为研究材料,采用接种鉴定、ELISA测定法、病毒双链RNA检测及RT-PcR检测4种方法对花叶毛白杨的致黄因子进行病毒学鉴定.结果表明:(1)花叶毛白杨花叶样品过滤液经对指示植物烟草(Nicotiana tabacmn)、大豆(Glycine max)及北京杨幼苗(Populus beijingensis)摩擦接种或注射接种后,未出现皱折、局部失绿等症状;(2)花叶毛白杨花叶样品过滤液选用24种抗血清进行酶联免疫检测,均未得到阳性结果;(3)花叶毛白杨花叶样品dsRNA电泳图未出现明亮条带;(4)RT-PCR未得到扩增产物.花叶毛白杨的叶片致黄因子不是由植物病毒引起.%In order to search factors related to the forming of mosaic leaf of Populus tomentosa ‘ Huaye' which was used as the research material, Nicotiana tabacum, Glycine max and Populus beijingensis were used as show plants. Inoculability, ELISA, distill RNA test and RT-PCR method were used to detect yellow mosaic virus of Populus tomentosa ‘Huaye' .The results showed that: (1) The plant of Nicotiana tabacum, Glycine max and Populus beijingensis didn't show wrinkle and losing green after rubbing or injecting inoculability by using the percolate of Populus tomentosa ‘Huaye'. (2) ELISA didn't show masculine. (3) The electrophoresis fig of Populus tomentosa ‘ Huaye' didn' t show bright strip. (4) There were no amplified products by RT-PCR. Plant Virus didn't cause yellow mosaic of Populus tomentosa ‘Huaye'.

  3. Evaluación de Ulmus pumila L. y Populus spp. como cultivos energéticos en corta rotación

    OpenAIRE

    Pérez García, Ignacio

    2016-01-01

    El presente trabajo estudia el empleo del olmo de Siberia (Ulmus Pumila L.) y el chopo (Populus spp.) en corta rotación y alta densidad para la producción de biomasa con fines energéticos. En el área mediterránea las disponibilidades hídricas son limitadas, por lo que la mayoría de los cultivos energéticos utilizados hasta el momento requieren el aporte de agua de riego; por ello resulta fundamental encontrar especies con bajos requerimientos hídricos, analizar la eficiencia en el uso del agu...

  4. Genome-wide analysis of the fasciclin-like arabinogalactan protein gene family reveals differential expression patterns, localization and salt stress response in Populus

    Directory of Open Access Journals (Sweden)

    Lina eZang

    2015-12-01

    Full Text Available Fasciclin-like arabinogalactan proteins (FLAs are a subclass of arabinogalactan proteins (AGPs involved in plant growth, development and response to abiotic stress. Although many studies have been performed to identify molecular functions of individual family members, little information is available on genome-wide identification and characterization of FLAs in the genus Populus. Based on genome-wide analysis, we have identified 35 Populus FLAs which were distributed on 16 chromosomes and phylogenetically clustered into four major groups. Gene structure and motif composition were relatively conserved in each group. All the members contained N-terminal signal peptide, 23 of which included predicted glycosylphosphatidylinositol (GPI modification sites and were anchored to plasma membranes. Subcellular localization analysis showed that PtrFLA2/20/26 were localized in cell membrane and cytoplasm of protoplasts from Populus stem-differentiating xylem. The Ka/Ks ratios showed that purifying selection has played a leading role in the long-term evolutionary period which greatly maintained the function of this family. The expression profiles showed that 32 PtrFLAs were differentially expressed in four tissues at four seasons based on publicly available microarray data. 18 FLAs were further verified with qRT-PCR in different tissues, which indicated that PtrFLA1/2/3/7/11/12/20/21/22/24/26/30 were significantly expressed in male and female flowers, suggesting close correlations with the reproductive development. In addition, PtrFLA1/9/10/11/17/21/23/24/26/28 were highly expressed in the stems and differentiating xylem, which may be involved in stem development. To determine salt response of FLAs, qRT-PCR was performed to analyze the expression of 18 genes under salinity stress across two time points. Results demonstrated that all the 18 FLAs were expressed in root tissues; especially, PtrFLA2/12/20/21/24/30 were significantly induced at different time

  5. Overexpression of Two PsnAP1 Genes from Populus simonii × P. nigra Causes Early Flowering in Transgenic Tobacco and Arabidopsis

    OpenAIRE

    Zheng, Tangchun; Li, Shuang; Zang, Lina; Dai, Lijuan; Yang, Chuanping; Qu, Guan-Zheng

    2014-01-01

    In Arabidopsis, AP1 is a floral meristem identity gene and plays an important role in floral organ development. In this study, PsnAP1-1 and PsnAP1-2 were isolated from the male reproductive buds of poplar (Populus simonii × P. nigra), which are the orthologs of AP1 in Arabidopsis, by sequence analysis. Northern blot and qRT-PCR analysis showed that PsnAP1-1 and PsnAP1-2 exhibited high expression level in early inflorescence development of poplar. Subcellular localization showed the PsnAP1-1 a...

  6. Comparison of growth of four tree species grown under agro-forestry systems. [Populus deltoides, Eucalyptus citriodora, Dalbergia sissoo, Salmalia malabrica

    Energy Technology Data Exchange (ETDEWEB)

    Sheikh, M.I.; Hussain, R.W.; Khan, M.

    1985-01-01

    Plants of Populus deltoides 1-63/51 and Eucalyptus citriodora, and cuttings of Dalbergia sissoo and Salmalia malabarica (Bombax malabaricum) were planted at 4X4m spacing in plots in Peshawar in February 1978. Sesamum indicum, maize and wheat were planted between tree rows. Height and diameter were recorded in December 1983. P. deltoides produced the best growth (av.ht. 21.1 m, av.d.b.h. 16.6cm) followed by B. malabaricum (av.ht. 19.8 m, av.d.b.h. 9.2cm).

  7. Aspen (Populus tremuloides Michx.) intake and preference by mammalian herbivores: the role of plant secondary compounds and nutritional context.

    Science.gov (United States)

    Villalba, Juan J; Burritt, Elizabeth A; St Clair, Samuel B

    2014-10-01

    Aspen (Populus tremuloides Michx.) has evolved a chemical defense system comprised of phenolic glycosides (PG), which effectively deter insect herbivory. However, much less is known about the role of PG and the nutritional quality of the associated plant community on aspen browse susceptibility to mammalian herbivores. In three successive periods during the growing season, we conducted experiments with sheep by offering leaves from two aspen stands with different concentrations of PG (LOW, HIGH) or aspen leaves vs. leaves from a forb (Utah pea, Lathyrus pauciflorus) or a grass (smooth brome, Bromus inermis Leyss.) growing in an aspen understory. Intake of aspen (19 to 35 % PG) was low in all periods (1 to 6 g/Kg(0.75) in 2 hr) supporting the notion that aspen's defense system may contribute to its ecological success. However, lambs ate larger amounts of LOW than of HIGH suggesting that sheep could discriminate between aspen stands with different concentrations of PG, even when both stands were relatively well defended. Concentration of nutrients and chemical defenses in aspen leaves remained fairly stable across the growing season, and preference for aspen increased over the growing season. In contrast, preference for the forb and the grass decreased across the growing season in concert with a decline in the nutritional quality of these plants. The data suggest that nutritional context of aspen and associated forage species drove preference more than contrasts in defense chemistry of aspen. There may be periods of "susceptibility" of aspen use by mammalian herbivores, despite high concentrations of chemical defenses, which can potentially be targeted by management to reduce aspen herbivory.

  8. Development of a threshold model to predict germination of Populus tomentosa seeds after harvest and storage under ambient condition.

    Directory of Open Access Journals (Sweden)

    Wei-Qing Wang

    Full Text Available Effects of temperature, storage time and their combination on germination of aspen (Populus tomentosa seeds were investigated. Aspen seeds were germinated at 5 to 30°C at 5°C intervals after storage for a period of time under 28°C and 75% relative humidity. The effect of temperature on aspen seed germination could not be effectively described by the thermal time (TT model, which underestimated the germination rate at 5°C and poorly predicted the time courses of germination at 10, 20, 25 and 30°C. A modified TT model (MTT which assumed a two-phased linear relationship between germination rate and temperature was more accurate in predicting the germination rate and percentage and had a higher likelihood of being correct than the TT model. The maximum lifetime threshold (MLT model accurately described the effect of storage time on seed germination across all the germination temperatures. An aging thermal time (ATT model combining both the TT and MLT models was developed to describe the effect of both temperature and storage time on seed germination. When the ATT model was applied to germination data across all the temperatures and storage times, it produced a relatively poor fit. Adjusting the ATT model to separately fit germination data at low and high temperatures in the suboptimal range increased the models accuracy for predicting seed germination. Both the MLT and ATT models indicate that germination of aspen seeds have distinct physiological responses to temperature within a suboptimal range.

  9. Populus euphratica XTH overexpression enhances salinity tolerance by the development of leaf succulence in transgenic tobacco plants.

    Science.gov (United States)

    Han, Yansha; Wang, Wei; Sun, Jian; Ding, Mingquan; Zhao, Rui; Deng, Shurong; Wang, Feifei; Hu, Yue; Wang, Yang; Lu, Yanjun; Du, Liping; Hu, Zanmin; Diekmann, Heike; Shen, Xin; Polle, Andrea; Chen, Shaoliang

    2013-11-01

    Populus euphratica is a salt-tolerant tree species that develops leaf succulence after a prolonged period of salinity stress. In the present study, a putative xyloglucan endotransglucosylase/hydrolase gene (PeXTH) from P. euphratica was isolated and transferred to tobacco plants. PeXTH localized exclusively to the endoplasmic reticulum and cell wall. Plants overexpressing PeXTH were more salt tolerant than wild-type tobacco with respect to root and leaf growth, and survival. The increased capacity for salt tolerance was due mainly to the anatomical and physiological alterations caused by PeXTH overexpression. Compared with the wild type, PeXTH-transgenic plants contained 36% higher water content per unit area and 39% higher ratio of fresh weight to dry weight, a hallmark of leaf succulence. However, the increased water storage in the leaves in PeXTH-transgenic plants was not accompanied by greater leaf thickness but was due to highly packed palisade parenchyma cells and fewer intercellular air spaces between mesophyll cells. In addition to the salt dilution effect in response to NaCl, these anatomical changes increased leaf water-retaining capacity, which lowered the increase of salt concentration in the succulent tissues and mesophyll cells. Moreover, the increased number of mesophyll cells reduced the intercellular air space, which improved carbon economy and resulted in a 47-78% greater net photosynthesis under control and salt treatments (100-150 mM NaCl). Taken together, the results indicate that PeXTH overexpression enhanced salt tolerance by the development of succulent leaves in tobacco plants without swelling.

  10. A cell wall-bound anionic peroxidase, PtrPO21, is involved in lignin polymerization in Populus trichocarpa

    Energy Technology Data Exchange (ETDEWEB)

    Lin, Chien-Yuan; Li, Quanzi; Tunlaya-Anukit, Sermsawat; Shi, Rui; Sun, Ying-Hsuan; Wang, Jack P.; Liu, Jie; Loziuk, Philip; Edmunds, Charles W.; Miller, Zachary D.; Peszlen, Ilona; Muddiman, David C.; Sederoff, Ronald R.; Chiang, Vincent L.

    2016-03-11

    Class III peroxidases are members of a large plant-specific sequence-heterogeneous protein family. Several sequence-conserved homologs have been associated with lignin polymerization in Arabidopsis thaliana, Oryza sativa, Nicotiana tabacum, Zinnia elegans, Picea abies, and Pinus sylvestris. In Populus trichocarpa, a model species for studies of wood formation, the peroxidases involved in lignin biosynthesis have not yet been identified. To do this, we retrieved sequences of all PtrPOs from Peroxibase and conducted RNA-seq to identify candidates. Transcripts from 42 PtrPOs were detected in stem differentiating xylem (SDX) and four of them are the most xylem-abundant (PtrPO12, PtrPO21, PtrPO42, and PtrPO64). PtrPO21 shows xylem-specific expression similar to that of genes encoding the monolignol biosynthetic enzymes. Using protein cleavage-isotope dilution mass spectrometry, PtrPO21 is detected only in the cell wall fraction and not in the soluble fraction. Downregulated transgenics of PtrPO21 have a lignin reduction of ~20% with subunit composition (S/G ratio) similar to wild type. The transgenics show a growth reduction and reddish color of stem wood. The modulus of elasticity (MOE) of the stems of the downregulated PtrPO21-line 8 can be reduced to ~60% of wild type. Differentially expressed gene (DEG) analysis of PtrPO21 downregulated transgenics identified a significant overexpression of PtPrx35, suggesting a compensatory effect within the peroxidase family. No significant changes in the expression of the 49 P. trichocarpa laccases (PtrLACs) were observed.

  11. Spatial distribution pattern and dynamics of the primary population in a natural Populus euphratica forest in Tarim Basin, Xinjiang, China

    Institute of Scientific and Technical Information of China (English)

    Lu HAN; Haizhen WANG; Zhengli ZHOU; Zhijun LI

    2008-01-01

    One 50 m × 50 m standard plot was sampled in a natural forest of Populus euphratica in Awati County, situated at the edge of the Tarim Basin, Xinjiang Uygur Autonomous Region, China. The field investigation was conducted with a contiguous grid quadrate method. By means of a test of variance/mean value ratio, aggregation intensity index and theoretical distribution models, the spatial distribution pattern and the dynamics of primary populations in P. euphratica forest were studied. The results showed that the spatial distribution pattern of two dominant arbor populations conformed to clumped distribution. The aggregation intensity of the P. euphra-tica population was higher than that of P. pruinosa popu- lation. The spatial distribution pattern of two companion plant populations in the shrub layer also conformed to clump type, though the aggregation intensity of Tamarix chinensis was higher. In the herb layer, the distribution patterns of Glycyrrhiza uralensis and Asparagus persicus conformed respectively to a clumped pattern and a ran-dom pattern. The results of a Taylor power method test and Iwao's m2-x regression model also verified that both P. euphratica and P. pruinosa populations belong to a clumped pattern. Although the distribution pattern of P. pruinosa population at different development stages all belonged to a clumped distribution pattern, the aggrega-tion intensity dropped gradually along with age develop-ment. The distribution patterns of the P. euphratica population at different development stages changed from random type to clumped type, and further to random type. The differences in spatial distribution patterns of different populations at different development stages were related not only to ecological and biological characteris-tics of each species in the communities in the light of competitive exclusion principle among the populations, but were also closely related to the habitats in which the species lived in.

  12. A multifactor analysis of fungal and bacterial community structure in the root microbiome of mature Populus deltoides trees.

    Directory of Open Access Journals (Sweden)

    Migun Shakya

    Full Text Available Bacterial and fungal communities associated with plant roots are central to the host health, survival and growth. However, a robust understanding of the root-microbiome and the factors that drive host associated microbial community structure have remained elusive, especially in mature perennial plants from natural settings. Here, we investigated relationships of bacterial and fungal communities in the rhizosphere and root endosphere of the riparian tree species Populus deltoides, and the influence of soil parameters, environmental properties (host phenotype and aboveground environmental settings, host plant genotype (Simple Sequence Repeat (SSR markers, season (Spring vs. Fall and geographic setting (at scales from regional watersheds to local riparian zones on microbial community structure. Each of the trees sampled displayed unique aspects to its associated community structure with high numbers of Operational Taxonomic Units (OTUs specific to an individual trees (bacteria >90%, fungi >60%. Over the diverse conditions surveyed only a small number of OTUs were common to all samples within rhizosphere (35 bacterial and 4 fungal and endosphere (1 bacterial and 1 fungal microbiomes. As expected, Proteobacteria and Ascomycota were dominant in root communities (>50% while other higher-level phylogenetic groups (Chytridiomycota, Acidobacteria displayed greatly reduced abundance in endosphere compared to the rhizosphere. Variance partitioning partially explained differences in microbiome composition between all sampled roots on the basis of seasonal and soil properties (4% to 23%. While most variation remains unattributed, we observed significant differences in the microbiota between watersheds (Tennessee vs. North Carolina and seasons (Spring vs. Fall. SSR markers clearly delineated two host populations associated with the samples taken in TN vs. NC, but overall host genotypic distances did not have a significant effect on corresponding communities

  13. Effects of isoprene production on the photosynthetic performance of Poplars (Populus sp.) under thermal and moisture stress

    Science.gov (United States)

    Parra, E. A.; McFarland, E.; Minor, R. L.; Heard, M. M.; Barron-Gafford, G.

    2015-12-01

    Poplars are an important agro-forestry product used for both biofuel and paper production. Importantly, all poplars are not created equal - some have the potential to produce isoprene, a compound thought to aid plants under temperatures and water stress conditions. Isoprene production, then, would be an important feature in a plant's response to projected climatic changes of warmer temperatures and longer inter-storm periods of drought. Our project observed how drought conditions modulated photosynthetic rates in two lineages of Populus trees, those that produce isoprene and those that have had isoprene gene knocked out. We measured leaf-level photosynthesis and thermal sensitivity from the two lineages under high and low soil water conditions in a common garden experiment. We found that both lines had similar photosynthetic rates over the range of temperatures and water exposure levels measured. However, we wondered if some of the variation we found in our data was due to the time of day of the measurements. Subsequent measurements of photosynthetic rates in the morning and afternoon on the same leaves illustrated that poplars reached higher rates of photosynthesis in the morning, but ultimately decreased faster than observed in the afternoon measurements (indicative of an eased thermal sensitivity in the afternoon). Also, we used measures of soil moisture and leaf water potential to determine that the "drought" treatment we had induced didn't actually yield any differences in the moisture status among the trees. Ultimately, our experiment showed that isoprene did not aid in photosynthesis under heat stressed conditions and that the common garden setting was not able to currently induce a water stress condition in the plants. We have begun exploring the use of low-altitude remote sensing by an unmanned aerial vehicles outfitted with thermal and multi-spectral cameras to quantify patterns of transpirational water loss, NDVI, leaf browning due to moisture stress

  14. Structure and Expression Profile of the Phosphate Pht1 Transporter Gene Family in Mycorrhizal Populus trichocarpa1[W

    Science.gov (United States)

    Loth-Pereda, Verónica; Orsini, Elena; Courty, Pierre-Emmanuel; Lota, Frédéric; Kohler, Annegret; Diss, Loic; Blaudez, Damien; Chalot, Michel; Nehls, Uwe; Bucher, Marcel; Martin, Francis

    2011-01-01

    Gene networks involved in inorganic phosphate (Pi) acquisition and homeostasis in woody perennial species able to form mycorrhizal symbioses are poorly known. Here, we describe the features of the 12 genes coding for Pi transporters of the Pht1 family in poplar (Populus trichocarpa). Individual Pht1 transporters play distinct roles in acquiring and translocating Pi in different tissues of mycorrhizal and nonmycorrhizal poplar during different growth conditions and developmental stages. Pi starvation triggered the up-regulation of most members of the Pht1 family, especially PtPT9 and PtPT11. PtPT9 and PtPT12 showed a striking up-regulation in ectomycorrhizas and endomycorrhizas, whereas PtPT1 and PtPT11 were strongly down-regulated. PtPT10 transcripts were highly abundant in arbuscular mycorrhiza (AM) roots only. PtPT8 and PtPT10 are phylogenetically associated to the AM-inducible Pht1 subfamily I. The analysis of promoter sequences revealed conserved motifs similar to other AM-inducible orthologs in PtPT10 only. To gain more insight into gene regulatory mechanisms governing the AM symbiosis in woody plant species, the activation of the poplar PtPT10 promoter was investigated and detected in AM of potato (Solanum tuberosum) roots. These results indicated that the regulation of AM-inducible Pi transporter genes is conserved between perennial woody and herbaceous plant species. Moreover, poplar has developed an alternative Pi uptake pathway distinct from AM plants, allowing ectomycorrhizal poplar to recruit PtPT9 and PtPT12 to cope with limiting Pi concentrations in forest soils. PMID:21705655

  15. Comparison of Pyrolysis Mass Spectrometry and Near Infrared Spectroscopy for Genetic Analysis of Lignocellulose Chemical Composition in Populus

    Directory of Open Access Journals (Sweden)

    Jianxing Zhang

    2014-03-01

    Full Text Available Genetic analysis of wood chemical composition is often limited by the cost and throughput of direct analytical methods. The speed and low cost of Fourier transform near infrared (FT-NIR overcomes many of these limitations, but it is an indirect method relying on calibration models that are typically developed and validated with small sample sets. In this study, we used >1500 young greenhouse grown trees from a clonally propagated single Populus family, grown at low and high nitrogen, and compared FT-NIR calibration sample sizes of 150, 250, 500 and 750 on calibration and prediction model statistics, and heritability estimates developed with pyrolysis molecular beam mass spectrometry (pyMBMS wood chemical composition. As calibration sample size increased from 150 to 750, predictive model statistics improved slightly. Overall, stronger calibration and prediction statistics were obtained with lignin, S-lignin, S/G ratio, and m/z 144 (an ion from cellulose, than with C5 and C6 carbohydrates, and m/z 114 (an ion from xylan. Although small differences in model statistics were observed between the 250 and 500 sample calibration sets, when predicted values were used for calculating genetic control, the 500 sample set gave substantially more similar results to those obtained with the pyMBMS data. With the 500 sample calibration models, genetic correlations obtained with FT-NIR and pyMBMS methods were similar. Quantitative trait loci (QTL analysis with pyMBMS and FT-NIR predictions identified only three common loci for lignin traits. FT-NIR identified four QTLs that were not found with pyMBMS data, and these QTLs were for the less well predicted carbohydrate traits.

  16. White popular (Populus alba L.) - Litter impact on chemical and biochemical parameters related to nitrogen cycle in contaminated soils

    Energy Technology Data Exchange (ETDEWEB)

    Ciadamidaro, L.; Madejon, P.; Cabrera, F.; Madejon, E.

    2014-06-01

    Aim of study: The aim of this study was to determine the effect of litter from Populus alba on chemical and biochemical properties related to the N cycle in soils with different pH values and trace element contents. We hypothesized that this litter would influence several parameters related to the N cycle and consequently to soil health. Area of study: we collected two reforested contaminated soils of different pH values (AZ pH 7.23 and DO pH 2.66) and a non-contaminated soil (RHU pH 7.19). Materials and methods: Soil samples were placed in 2,000 cm{sup 3} microcosms and were incubated for 40 weeks in controlled conditions. Each soil was mixed with its corresponding litter, and soils without litter were also tested for comparison. Ammonium (NH{sub 4}{sup 4}+-N) and nitrate (NO{sub 3}{sup -} -N) content, potential nitrification rate (PNR), microbial biomass nitrogen (MBN), protease activity, and several chemical properties such as pH, available trace element concentrations (extracted with 0.01 M CaCl{sub 2}) were determined at different times of incubation. Main results: Values of available trace elements did not vary during the incubation and were always higher in acid soil. In neutral soils litter presence increased values of Kjeldahl-N, NO{sub 3} –-N content, potential nitrification rate (PNR), microbial biomass nitrogen (MBN) and protease activity. Presence of trace elements in neutral soils did not alter the parameters studied. However, acidic pH and high content of available trace elements strongly affected NH{sub 4}{sup +}-N and NO{sub 3}{sup -} -N, microbial biomass N and protease activity. Research highlights: Our results showed the negative effect of the acidity and trace element availability in parameters related with the N-cycle. (Author)

  17. Variation in resistance to the rust fungus Melampsora larici-populina Kleb. in Populus nigra L. in the Czech Republic

    Directory of Open Access Journals (Sweden)

    Štochlová P

    2016-02-01

    Full Text Available Differences in Populus nigra L. clone resistance to the rust fungus Melampsora larici-populina Kleb. (MLP were studied in field trials where infected trees were compared with fungicide-protected trees. MLP rust infections were assessed using a 6-point scale. Four parameters of poplar growth were also measured to gauge host response to infection: shoot thickness, shoot number at the end of the growing season, individual plant dry weight, and dry matter yield per unit area. Five of eight known pathogen virulence types were detected. Cumulative growth in shoot thickness in sprayed and unsprayed plots was similar in clones with high rust pathogen resistance, but significantly different in clones with low resistance. Clones with low resistance also exhibited delayed growth initiation in the year following infection, an effect attributed to lower food storage accumulated during the previous year, reflected in a reduction in stem diameter. Based on stem thickness measurements, it was confirmed growth ceased at the end of August. Average rust severity symptoms ranged from 2.75 to 4.22 on the 6-point scale. The percentage reduction for the various growth parameters resulting from rust infection ranged as follows: individual plant dry weight 5-64%; dry matter yield 21-66%; shoot number 17-46%; and stem diameter 1-35%. Exclusive of stem diameter, these reductions correlated with severity in MLP rust infection. The one exception was tolerance to rust infection displayed by one of the clones. Clones with the lowest growth reductions were 97/152 and 97/157. Growth and yield parameter variation as a result MLP resistance difference was observed among tested P. nigra clones. This variation can be viewed as confirmation that resistance observed in this study and P. nigra clones is a suite of quantitative traits. These findings have important implications for MLP resistance breeding programs.

  18. Association genetics in Populus reveals the interactions between Pt-miR397a and its target genes

    Science.gov (United States)

    Chen, Jinhui; Chen, Beibei; Yang, Xiaohui; Tian, Jiaxing; Du, Qingzhang; Zhang, Deqiang

    2015-01-01

    Recent studies have revealed associations between single nucleotide polymorphisms (SNPs) in microRNA (miRNA) genes and diseases. However, association studies to decipher the interactions between miRNAs and their target genes remain to be conducted. Here, we investigated the association of growth and wood traits with SNPs in Pt-miR397a and its targets, in 261 individuals from a natural population of Populus tomentosa. Of the 57 SNPs identified in Pt-miR397a, three strongly affect its secondary stability, and SNPs in target sites in Pt-LAC20 and Pt-HSP40 changed the binding affinity of Pt-miR397a. Single-SNP association analysis revealed that SNPs in Pt-miR397a significantly associated with α-cellulose content and stem volume, and SNPs in target genes also associated with growth and wood-property traits. Multi-SNP association analysis with additive and dominant models found that SNPs in six potential target genes associated with at least one trait in common with Pt-miR397a, revealing a possible genetic interaction between Pt-miR397a and its targets. Furthermore, epistasis analysis revealed epistatic interactions between SNPs in Pt-miR397a and its target genes. Thus, our study indicated that SNPs in Pt-miR397a and six target genes affect wood formation and that association studies can reveal the interactions between miRNAs and their target genes. PMID:26115173

  19. Uptake, translocation, and transformation of quantum dots with cationic versus anionic coatings by Populus deltoides × nigra cuttings.

    Science.gov (United States)

    Wang, Jing; Yang, Yu; Zhu, Huiguang; Braam, Janet; Schnoor, Jerald L; Alvarez, Pedro J J

    2014-06-17

    Manipulation of the organic coatings of nanoparticles such as quantum dots (QDs) to enhance specific applications may also affect their interaction and uptake by different organisms. In this study, poplar trees (Populus deltoides × nigra) were exposed hydroponically to 50-nM CdSe/CdZnS QDs coated with cationic polyethylenimine (PEI) (35.3 ± 6.6 nm) or poly(ethylene glycol) of anionic poly(acrylic acid) (PAA-EG) (19.5 ± 7.2 nm) to discern how coating charge affects nanoparticle uptake, translocation, and transformation within woody plants. Uptake of cationic PEI-QDs was 10 times faster despite their larger hydrodynamic size and higher extent of aggregation (17 times larger than PAA-EG-QDs after 11-day incubation in the hydroponic medium), possibly due to electrostatic attraction to the negatively charged root cell wall. QDs cores aggregated upon root uptake, and their translocation to poplar shoots (negligible for PAA-EG-QDs and 0.7 ng Cd/mg stem for PEI-QDs) was likely limited by the endodermis. After 2-day exposure, PEI and PAA-EG coatings were likely degraded from the internalized QDs inside the plant, leading to the aggregation of the metallic cores and a "red-shift" of fluorescence. The fluorescence of PEI-QD aggregates was stable inside the roots through the 11-day exposure period. In contrast, the PAA-EG-QD aggregates lost fluorescence inside the plant after 11 days probably due to destabilization of the coating, even though these QDs were stable in the hydroponic solution. Overall, these results highlight the importance of coating properties in the rate and extent to which nanoparticles are assimilated by plants and potentially introduced into food webs. PMID:24870363

  20. A multifactor analysis of fungal and bacterial community structure of the root microbiome of mature Populus deltoides trees

    Energy Technology Data Exchange (ETDEWEB)

    Shakya, Migun [ORNL; Gottel, Neil R [ORNL; Castro Gonzalez, Hector F [ORNL; Yang, Zamin [ORNL; Gunter, Lee E [ORNL; Labbe, Jessy L [ORNL; Muchero, Wellington [ORNL; Bonito, Gregory [Duke University; Vilgalys, Rytas [Duke University; Tuskan, Gerald A [ORNL; Podar, Mircea [ORNL; Schadt, Christopher Warren [ORNL

    2013-01-01

    Bacterial and fungal communities associated with plant roots are central to the host- health, survival and growth. However, a robust understanding of root-microbiome and the factors that drive host associated microbial community structure have remained elusive, especially in mature perennial plants from natural settings. Here, we investigated relationships of bacterial and fungal communities in the rhizosphere and root endosphere of the riparian tree species Populus deltoides, and the influence of soil parameters, environmental properties (host phenotype and aboveground environmental settings), host plant genotype (Simple Sequence Repeat (SSR) markers), season (Spring vs. Fall) and geographic setting (at scales from regional watersheds to local riparian zones) on microbial community structure. Each of the trees sampled displayed unique aspects to it s associated community structure with high numbers of Operational Taxonomic Units (OTUs) specific to an individual trees (bacteria >90%, fungi >60%). Over the diverse conditions surveyed only a small number of OTUs were common to all samples within rhizosphere (35 bacterial and 4 fungal) and endosphere (1 bacterial and 1 fungal) microbiomes. As expected, Proteobacteria and Ascomycota were dominant in root communities (>50%) while other higher-level phylogenetic groups (Chytridiomycota, Acidobacteria) displayed greatly reduced abundance in endosphere compared to the rhizosphere. Variance partitioning partially explained differences in microbiome composition between all sampled roots on the basis of seasonal and soil properties (4% to 23%). While most variation remains unattributed, we observed significant differences in the microbiota between watersheds (Tennessee vs. North Carolina) and seasons (Spring vs. Fall). SSR markers clearly delineated two host populations associated with the samples taken in TN vs. NC, but overall genotypic distances did not have a significant effect on corresponding communities that could be