Draft Genome of the Pearl Oyster Pinctada fucata: A Platform for Understanding Bivalve Biology

Science.gov (United States)

Takeuchi, Takeshi; Kawashima, Takeshi; Koyanagi, Ryo; Gyoja, Fuki; Tanaka, Makiko; Ikuta, Tetsuro; Shoguchi, Eiichi; Fujiwara, Mayuki; Shinzato, Chuya; Hisata, Kanako; Fujie, Manabu; Usami, Takeshi; Nagai, Kiyohito; Maeyama, Kaoru; Okamoto, Kikuhiko; Aoki, Hideo; Ishikawa, Takashi; Masaoka, Tetsuji; Fujiwara, Atushi; Endo, Kazuyoshi; Endo, Hirotoshi; Nagasawa, Hiromichi; Kinoshita, Shigeharu; Asakawa, Shuichi; Watabe, Shugo; Satoh, Nori

2012-01-01

The study of the pearl oyster Pinctada fucata is key to increasing our understanding of the molecular mechanisms involved in pearl biosynthesis and biology of bivalve molluscs. We sequenced ∼1150-Mb genome at ∼40-fold coverage using the Roche 454 GS-FLX and Illumina GAIIx sequencers. The sequences were assembled into contigs with N50 = 1.6 kb (total contig assembly reached to 1024 Mb) and scaffolds with N50 = 14.5 kb. The pearl oyster genome is AT-rich, with a GC content of 34%. DNA transposons, retrotransposons, and tandem repeat elements occupied 0.4, 1.5, and 7.9% of the genome, respectively (a total of 9.8%). Version 1.0 of the P. fucata draft genome contains 23 257 complete gene models, 70% of which are supported by the corresponding expressed sequence tags. The genes include those reported to have an association with bio-mineralization. Genes encoding transcription factors and signal transduction molecules are present in numbers comparable with genomes of other metazoans. Genome-wide molecular phylogeny suggests that the lophotrochozoan represents a distinct clade from ecdysozoans. Our draft genome of the pearl oyster thus provides a platform for the identification of selection markers and genes for calcification, knowledge of which will be important in the pearl industry. PMID:22315334

Artificially evolved functional shell morphology of burrowing bivalves

DEFF Research Database (Denmark)

Germann, D. P.; Schatz, W.; Hotz, Peter Eggenberger

2014-01-01

The morphological evolution of bivalves is documented by a rich fossil record. It is believed that the shell shape and surface sculpture play an important role for the burrowing performance of endobenthic species. While detailed morphometric studies of bivalve shells have been done...... dimensional (3D) objects, the first ever artificial evolution of a physical bivalve shell was performed. The result was a vertically flattened shell occupying only the top sediment layers. Insufficient control of the sediment was the major limitation of the setup and restricted the significance of the results...

Indian marine bivalves: Potential source of antiviral drugs

Digital Repository Service at National Institute of Oceanography (India)

Chatterji, A.; Ansari, Z.A.; Ingole, B.S.; Bichurina, M.A.; Sovetova, M.; Boikov, Y.A.

in large quantities by traditional methods and sold live in the market for human consumption. The economically important sp e cies of marine bivalves are green mussel ( Perna viridis ), e s tuarine oyster ( Crassostrea madrasensis ), giant oyster... in developing an effecti ve drug has been the unique characteristics of antigenic variation of virus resulting in the emergence of new variant virus strains 14 . There are a number of antiviral drugs introduced in the market such as tricyclic sy m- metric...

Persistent organic pollutants in four bivalve species from Svalbard waters

International Nuclear Information System (INIS)

Vieweg, Ireen; Hop, Haakon; Brey, Thomas; Huber, Sandra; Ambrose, William G.; Locke V, William L.; Gabrielsen, Geir W.

2012-01-01

Organochlorine compounds (OC) were determined in Arctic bivalves (Mya truncata, Serripes groenlandicus, Hiatella arctica and Chlamys islandica) from Svalbard with regard to differences in geographic location, species and variations related to their size and age. Higher chlorinated polychlorinated biphenyls (PCB 101–PCB 194), chlordanes and α-hexachlorocyclohexane (α-HCH) were consistently detected in the bivalves and PCBs dominated the OC load in the organisms. OC concentrations were highest in Mya truncata and the lowest in Serripes groenlandicus. Species-specific OC levels were likely related to differences in the species’ food source, as indicated by the δ 13 C results, rather than size and age. Higher OC concentrations were observed in bivalves from Kongsfjorden compared to the northern sampling locations Liefdefjorden and Sjuøyane. The spatial differences might be related to different water masses influencing Kongsfjorden (Atlantic) and the northern locations (Arctic), with differing phytoplankton bloom situations. - Highlights: ► Organochlorine compounds (OC) were analyzed in 4 bivalve species from Svalbard. ► Polychlorinated biphenyls dominated the OC load observed in the bivalves. ► Atlantic water influenced bivalves had higher OC levels than those from Arctic water. ► Location and species, rather than size and age, determined the OC pattern found. - New findings of organochlorines in Arctic bivalves that are central for evaluating the importance of geographical location and species for the organochlorine pattern in benthic organisms.

Metabolites of saxitoxin analogues in bivalves contaminated by Gymnodinium catenatum.

Science.gov (United States)

Vale, Paulo

2010-01-01

Bivalve metabolites of saxitoxin analogues, not present in microalgae, were recently described as an important toxin fraction in mussels contaminated by Alexandrium tamarense. These possess very low fluorescence, and require mass spectrometry detection. HILIC-MS was implemented to look for these metabolites in bivalves contaminated during Gymnodinium catenatum blooms at the Portuguese coast. The presence of M1 was tentatively identified in several bivalves, ranging from estuarine (Mytilus galloprovinciallis, Cerastoderma edule and Ruditapes decussatus) to oceanic habitat (Donax trunculus and Ensis spp.). It was hypothesized that M1 could contribute to an important fraction of the profile of STX analogues. M1 was more abundant in estuarine bivalves that retain longer PSP toxins, in the following order: mussels>cockles>clams. These data highlight that the study by fluorimetry alone of the carbamoyl, N-sulfocarbamoyl, and decarbamoyl families is manifestly insufficient to fully understand toxin dynamics in bivalves feeding on G. catenatum without a proper study of hydroxybenzoate and hydroxylated M-toxins.

Microbial Diseases of Bivalve Mollusks: Infections, Immunology and Antimicrobial Defense.

Science.gov (United States)

Zannella, Carla; Mosca, Francesco; Mariani, Francesca; Franci, Gianluigi; Folliero, Veronica; Galdiero, Marilena; Tiscar, Pietro Giorgio; Galdiero, Massimiliano

2017-06-17

A variety of bivalve mollusks (phylum Mollusca, class Bivalvia) constitute a prominent commodity in fisheries and aquacultures, but are also crucial in order to preserve our ecosystem's complexity and function. Bivalve mollusks, such as clams, mussels, oysters and scallops, are relevant bred species, and their global farming maintains a high incremental annual growth rate, representing a considerable proportion of the overall fishery activities. Bivalve mollusks are filter feeders; therefore by filtering a great quantity of water, they may bioaccumulate in their tissues a high number of microorganisms that can be considered infectious for humans and higher vertebrates. Moreover, since some pathogens are also able to infect bivalve mollusks, they are a threat for the entire mollusk farming industry. In consideration of the leading role in aquaculture and the growing financial importance of bivalve farming, much interest has been recently devoted to investigate the pathogenesis of infectious diseases of these mollusks in order to be prepared for public health emergencies and to avoid dreadful income losses. Several bacterial and viral pathogens will be described herein. Despite the minor complexity of the organization of the immune system of bivalves, compared to mammalian immune systems, a precise description of the different mechanisms that induce its activation and functioning is still missing. In the present review, a substantial consideration will be devoted in outlining the immune responses of bivalves and their repertoire of immune cells. Finally, we will focus on the description of antimicrobial peptides that have been identified and characterized in bivalve mollusks. Their structural and antimicrobial features are also of great interest for the biotechnology sector as antimicrobial templates to combat the increasing antibiotic-resistance of different pathogenic bacteria that plague the human population all over the world.

First records of Freshwater Bivalves of Ilha Grande National Park, Paraná, Brazil

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Flávio Henrique Ragonha

2014-03-01

Full Text Available The Ilha Grande National Park, Paraná, Brazil, is located in the Upper Paraná River and has characteristics typical of a floodplains. This protected area includes lagoons connected and disconnected to the Paraná River, although the latter also connect during periods of high water level, thus composing a heterogeneous group of lacustrine environments. The enormous potential the flora and fauna diversities are still little known to the region, as can be seen through benthic invertebrates, inclunding bivalves mollusks. The granulometric composition of these floodplain lagoons was formed mainly by mud and very fine sand. Furthermore, organic matter composition was predominantly of fine particulate. The other abiotic factors differed from lagoons located within the island of the park to those located in the left margin of Paraná River. The results demonstrated the importance of abiotic factors such as the physical composition of granulometric texture, organic matter and macrophyte banks, to the establishment of bivalves in these floodplain lagoons. We recorded bivalves of Pisidium (native, Diplodon (native, and Corbicula (invasive. The highest values of Diplodon sp. density were observed at São João/C lake, for Pisidium sterkianum (Pilsbry, 1897 at São João/M lake, and to Jatobá/C lagoon with high density of invasive species Corbicula fluminea (Müller, 1774. This study to obtain conduct the first records of freshwater bivalves in floodplains lagoon in the Ilha Grande National Park, and provides contributions to better understanding the ecology of these mollusks. The recording of native species in the region of Upper Paraná River floodplain after a lomg period without new records, demonstrated the importance of protecting the lagoons of the Ilha Grande National Park as they can be a possible refuge to some species of native freshwater bivalves.

A novel filtering mutualism between a sponge host and its endosymbiotic bivalves.

Science.gov (United States)

Tsubaki, Remi; Kato, Makoto

2014-01-01

Sponges, porous filter-feeding organisms consisting of vast canal systems, provide unique substrates for diverse symbiotic organisms. The Spongia (Spongia) sp. massive sponge is obligately inhabited by the host-specific endosymbiotic bivalve Vulsella vulsella, which benefits from this symbiosis by receiving protection from predators. However, whether the host sponge gains any benefit from this association is unclear. Considering that the bivalves exhale filtered water into the sponge body rather than the ambient environment, the sponge is hypothesized to utilize water exhaled by the bivalves to circulate water around its body more efficiently. We tested this hypothesis by observing the sponge aquiferous structure and comparing the pumping rates of sponges and bivalves. Observations of water currents and the sponge aquiferous structure revealed that the sponge had a unique canal system enabling it to inhale water exhaled from bivalves, indicating that the host sponge adapted morphologically to receive water from the bivalves. In addition, the volume of water circulating in the sponge body was dramatically increased by the water exhaled from bivalves. Therefore, this sponge-bivalve association can be regarded as a novel mutualism in which two filter-feeding symbionts promote mutual filtering rates. This symbiotic association should be called a "filtering mutualism".

An overview of chemosynthetic symbioses in bivalves from the North Atlantic and Mediterranean Sea

Science.gov (United States)

Duperron, S.; Gaudron, S. M.; Rodrigues, C. F.; Cunha, M. R.; Decker, C.; Olu, K.

2013-05-01

Deep-sea bivalves found at hydrothermal vents, cold seeps and organic falls are sustained by chemosynthetic bacteria that ensure part or all of their carbon nutrition. These symbioses are of prime importance for the functioning of the ecosystems. Similar symbioses occur in other bivalve species living in shallow and coastal reduced habitats worldwide. In recent years, several deep-sea species have been investigated from continental margins around Europe, West Africa, eastern Americas, the Gulf of Mexico, and from hydrothermal vents on the Mid-Atlantic Ridge. In parallel, numerous, more easily accessible shallow marine species have been studied. Herein we provide a summary of the current knowledge available on chemosymbiotic bivalves in the area ranging west-to-east from the Gulf of Mexico to the Sea of Marmara, and north-to-south from the Arctic to the Gulf of Guinea. Characteristics of symbioses in 53 species from the area are summarized for each of the five bivalve families documented to harbor chemosynthetic symbionts (Mytilidae, Vesicomyidae, Solemyidae, Thyasiridae and Lucinidae). Comparisons are made between the families, with special emphasis on ecology, life cycle, and connectivity. Chemosynthetic symbioses are a major adaptation to ecosystems and habitats exposed to reducing conditions. However, relatively little is known regarding their diversity and functioning, apart from a few "model species" on which effort has focused over the last 30 yr. In the context of increasing concern about biodiversity and ecosystems, and increasing anthropogenic pressure on oceans, we advocate a better assessment of the diversity of bivalve symbioses in order to evaluate the capacities of these remarkable ecological and evolutionary units to withstand environmental change.

An overview of chemosynthetic symbioses in bivalves from the North Atlantic and Mediterranean Sea

Directory of Open Access Journals (Sweden)

S. Duperron

2013-05-01

Full Text Available Deep-sea bivalves found at hydrothermal vents, cold seeps and organic falls are sustained by chemosynthetic bacteria that ensure part or all of their carbon nutrition. These symbioses are of prime importance for the functioning of the ecosystems. Similar symbioses occur in other bivalve species living in shallow and coastal reduced habitats worldwide. In recent years, several deep-sea species have been investigated from continental margins around Europe, West Africa, eastern Americas, the Gulf of Mexico, and from hydrothermal vents on the Mid-Atlantic Ridge. In parallel, numerous, more easily accessible shallow marine species have been studied. Herein we provide a summary of the current knowledge available on chemosymbiotic bivalves in the area ranging west-to-east from the Gulf of Mexico to the Sea of Marmara, and north-to-south from the Arctic to the Gulf of Guinea. Characteristics of symbioses in 53 species from the area are summarized for each of the five bivalve families documented to harbor chemosynthetic symbionts (Mytilidae, Vesicomyidae, Solemyidae, Thyasiridae and Lucinidae. Comparisons are made between the families, with special emphasis on ecology, life cycle, and connectivity. Chemosynthetic symbioses are a major adaptation to ecosystems and habitats exposed to reducing conditions. However, relatively little is known regarding their diversity and functioning, apart from a few "model species" on which effort has focused over the last 30 yr. In the context of increasing concern about biodiversity and ecosystems, and increasing anthropogenic pressure on oceans, we advocate a better assessment of the diversity of bivalve symbioses in order to evaluate the capacities of these remarkable ecological and evolutionary units to withstand environmental change.

Mercury accumulation in marine bivalves: Influences of biodynamics and feeding niche

Energy Technology Data Exchange (ETDEWEB)

Pan Ke [Division of Life Science, Hong Kong University of Science and Technology (HKUST), Clear Water Bay, Kowloon (Hong Kong); Wang Wenxiong, E-mail: wwang@ust.hk [Division of Life Science, Hong Kong University of Science and Technology (HKUST), Clear Water Bay, Kowloon (Hong Kong)

2011-10-15

Differences in the accumulation of mercury (Hg) in five species of marine bivalves, including scallops Chlamys nobilis, clams Ruditapes philippinarum, oysters Saccostrea cucullata, green mussels Perna viridis, and black mussels Septifer virgatus, were investigated. The bivalves displayed different patterns of Hg accumulation in terms of the body concentrations of methylmercury (MeHg) and total Hg (THg), as well as the ratio of MeHg to THg. Parameters of the biodynamics of the accumulation of Hg(II) and MeHg could reflect the species-dependent Hg concentrations in the bivalves. With the exception of black mussels, we found a significant relationship between the efflux rates of Hg(II) and the THg concentrations in the bivalves. The interspecific variations in the MeHg to THg ratio were largely controlled by the relative difference between the elimination rates of Hg(II) and MeHg. Stable isotope ({delta}{sup 13}C) analysis indicated that the five bivalve species had contrasting feeding niches, which may also affect the Hg accumulation. - Highlights: > Significant difference in Hg accumulation and MeHg:THg ratio in different bivalves. > THg concentrations in the bivalves were generally related to the efflux rates of Hg(II). > Elimination of Hg(II) and MeHg controlled the interspecific variation in MeHg:THg ratio. > MeHg and THg concentrations reflect the interaction of Hg biodynamics and food. - The species-specific body concentrations of MeHg and THg in bivalves reflect the complicated interaction between the biodynamics of Hg(II) and MeHg and the different food sources.

Bioaccumulation of selenium and induced biological effects in the filter feeding bivalve Corbicula fluminea: influence of ventilatory activity, selenium speciation and route of transfer

International Nuclear Information System (INIS)

Fournier, E.

2005-10-01

Selenium is an essential micro-nutrient for most of living organisms. However, toxic effects in several ecosystems have been reported in the literature. Toxicity comprehension is difficult due to the complexity of Se oxidation states in the environment. The aim of this thesis work was to acquire knowledge on the physiological and environmental factors involved in bioaccumulation and toxicity processes in the freshwater filter-feeding bivalve C. fluminea. The aims were: i) to define what the factors involved in Se bioaccumulation processes in the bivalve are, ii) to characterize Se bioaccumulation at different biological organisation levels, iii) to investigate Se toxic effects. First experiments, carried out for short term exposure duration (3 days), have permitted to underline the importance of Se chemical speciation in bioaccumulation processes in C. fluminea. It has been shown that the organic form, seleno-methionine, was much more bio-available than the inorganic forms, selenite and selenate. Moreover, the route of transfer was determinant in those processes. Inorganic forms have been better extracted by trophic route, whereas seleno-methionine has been better extracted by the direct route. In our experimental conditions, ventilation of the bivalve has not been a limiting factor for Se bioaccumulation by the direct route, whereas it has been for bioaccumulation by the trophic route. Ventilation has been largely modified by the presence of dissolved selenite and seleno-methionine. We have shown that the kinetics of seleno-methionine bioaccumulation are much more fast than those of selenite. Moreover, when introduced as SeMet, internalized Se appeared to be relatively remanent in soft tissues of C. fluminea in comparison with Se internalized when introduced as selenite. Subcellular and molecular distributions of these forms were very different. Finally, it has been shown that seleno-methionine and selenite could generate weak alterations of the anti

Modeling the carbon isotope composition of bivalve shells (Invited)

Science.gov (United States)

Romanek, C.

2010-12-01

The stable carbon isotope composition of bivalve shells is a valuable archive of paleobiological and paleoenvironmental information. Previous work has shown that the carbon isotope composition of the shell is related to the carbon isotope composition of dissolved inorganic carbon (DIC) in the ambient water in which a bivalve lives, as well as metabolic carbon derived from bivalve respiration. The contribution of metabolic carbon varies among organisms, but it is generally thought to be relatively low (e.g., 90%) in the shells from terrestrial organisms. Because metabolic carbon contains significantly more C-12 than DIC, negative excursions from the expected environmental (DIC) signal are interpreted to reflect an increased contribution of metabolic carbon in the shell. This observation contrasts sharply with modeled carbon isotope compositions for shell layers deposited from the inner extrapallial fluid (EPF). Previous studies have shown that growth lines within the inner shell layer of bivalves are produced during periods of anaerobiosis when acidic metabolic byproducts (e.g., succinic acid) are neutralized (or buffered) by shell dissolution. This requires the pH of EPF to decrease below ambient levels (~7.5) until a state of undersaturation is achieved that promotes shell dissolution. This condition may occur when aquatic bivalves are subjected to external stressors originating from ecological (predation) or environmental (exposure to atm; low dissolved oxygen; contaminant release) pressures; normal physiological processes will restore the pH of EPF when the pressure is removed. As a consequence of this process, a temporal window should also exist in EPF at relatively low pH where shell carbonate is deposited at a reduced saturation state and precipitation rate. For example, EPF chemistry should remain slightly supersaturated with respect to aragonite given a drop of one pH unit (6.5), but under closed conditions, equilibrium carbon isotope fractionation

Artificially evolved functional shell morphology of burrowing bivalves

DEFF Research Database (Denmark)

Germann, D. P.; Schatz, W.; Hotz, Peter Eggenberger

2014-01-01

dimensional (3D) objects, the first ever artificial evolution of a physical bivalve shell was performed. The result was a vertically flattened shell occupying only the top sediment layers. Insufficient control of the sediment was the major limitation of the setup and restricted the significance of the results......, there are almost no studies experimentally testing their dynamic properties. To investigate the functional morphology of the bivalve shell, we employed a synthetic methodology and built an experimental setup to simulate the burrowing process. Using an evolutionary algorithm and a printer that prints three...

Veda-scope: More comfortable than the bivalve speculum and cytologically equivalent.

Science.gov (United States)

Longmore, Peter G

2004-04-01

The aim of the present study was to confirm that the Veda-scope is equivalent to the bivalve speculum in the collection of endocervical cells, as confirmation of adequate cervical sampling for Pap smear testing. The study also aimed to assess the comfort level of the Veda-scope compared to the traditional bivalve speculum and the patient preference of the Veda-scope compared to the bivalve speculum. Multicentre, randomised, controlled crossover, cytologist blinded study. The total number of subjects enrolled in the study were 250. The number of evaluable subjects were 210. In primary efficacy analysis, no significant difference was seen between the presence or absence of endocervical cells in the smears using either the Veda-scope or the bivalve speculum. There was a high concordance level between the diagnosis assigned to each specimen of a paired sample, the diagnosis agreeing in 97.6% cases. The primary reason given by many women for avoidance of regular Pap smear examinations is the discomfort or pain experienced with sample collection with the bivalve speculum. In the present study, 92% of subjects indicated a preference for the Veda-scope for Pap smear collection, while only 8.4% preferred the bivalve speculum. Subject preference was also assessed with respect to how the subject rated the comfort level of her previous Pap smear. In subjects who rated their previous Pap smear as very comfortable or comfortable, 86% expressed a preference for the Veda-scope. This rose to 93% in subjects who rated their previous Pap smear as only tolerable. The results of the present study show that Pap smear collections with the Veda-scope are of equal quality to those collected with the bivalve speculum, with an equivalent diagnostic outcome. A very strong preference for the Veda-scope was shown by the women enrolled in the present study based on the comfort levels experienced with the two devices.

Biological Carbon Dioxide Assimilation Process Using Marine Phytoplankton Tetraselmis suecica and Bivalve Perna viridis

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Sirichai Dharmvanij

2012-01-01

Full Text Available The Biological CO2 assimilation process using marine phytoplankton and marine bivalve was evaluated by carbon assimilation of the green mussel Perna viridis fed with Tetraselmis suecica under laboratory condition. Incorporation of carbon dioxide into phytoplankton biomass was performed through aeration. The experiment consisted of three treatments i.e. mussels without feeding (Control, mussels fed with T. suecica cultured with air (Treatment 1: T-Air, and mussels fed with T. suecica cultured with 1.5% CO2 in air (Treatment 2: T-CO2. The results showed that growth of mussels in T-Air and T-CO2 was 22.4 ± 4.0 mg/individual/day and 28.9 ± 12.3 mg/individual/day, respectively, which was significantly higher than control (mussels without feeding. Growth of mussels in T-Air was significantly lower than in T-CO2. Carbon content in shell (15.59 ± 0.57 % D.W. and meat (38.28 ± 1.72 % D.W. of mussels fed with aerated T. suecica (T-Air was significantly higher than that found in mussels fed with 1.5% CO2 T. suecica (14.2 ± 0.47 and 36.61± 0.43 % D.W. in shell and in meat, respectively (p≤0.05. With T-Air, 1.95±0.27 and 9.36±1.24% of carbon from T. suecica cells was assimilated into shell and meat of the mussel, respectively, while in T-CO2 , carbon assimilation from T. suecica cells in shell and meat was 2.19±0.55 and 11.22±2.76% respectively.

First evidence of immunomodulation in bivalves under seawater acidification and increased temperature.

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Valerio Matozzo

Full Text Available Water acidification, temperature increases and changes in seawater salinity are predicted to occur in the near future. In such a global climate change (GCC scenario, there is growing concern for the health status of both wild and farmed organisms. Bivalve molluscs, an important component of coastal marine ecosystems, are at risk. At the immunological level, the ability of an organism to maintain its immunosurveillance unaltered under adverse environmental conditions may enhance its survival capability. To our knowledge, only a few studies have investigated the effects of changing environmental parameters (as predicted in a GCC scenario on the immune responses of bivalves. In the present study, the effects of both decreased pH values and increased temperature on the important immune parameters of two bivalve species were evaluated for the first time. The clam Chamelea gallina and the mussel Mytilus galloprovincialis, widespread along the coast of the Northwestern Adriatic Sea, were chosen as model organisms. Bivalves were exposed for 7 days to three pH values (8.1, 7.7 and 7.4 at two temperatures (22 and 28°C. Three independent experiments were carried out at salinities of 28, 34 and 40 PSU. The total haemocyte count, Neutral Red uptake, haemolymph lysozyme activity and total protein levels were measured. The results obtained demonstrated that tested experimental conditions affected significantly most of the immune parameters measured in bivalves, even if the variation pattern of haemocyte responses was not always linear. Between the two species, C. gallina appeared more vulnerable to changing pH and temperature than M. galloprovincialis. Overall, this study demonstrated that climate changes can strongly affect haemocyte functionality in bivalves. However, further studies are needed to clarify better the mechanisms of action of changing environmental parameters, both individually and in combination, on bivalve haemocytes.

The isotopic biosignatures of photo- vs. thiotrophic bivalves: are they preserved in fossil shells?

Science.gov (United States)

Dreier, A; Loh, W; Blumenberg, M; Thiel, V; Hause-Reitner, D; Hoppert, M

2014-09-01

Symbiont-bearing and non-symbiotic marine bivalves were used as model organisms to establish biosignatures for the detection of distinctive symbioses in ancient bivalves. For this purpose, the isotopic composition of lipids (δ13C) and bulk organic shell matrix (δ13C, δ34S, δ15N) from shells of several thiotrophic, phototrophic, or non-symbiotic bivalves were compared (phototrophic: Fragum fragum, Fragum unedo, Tridacna maxima; thiotrophic: Codakia tigerina, Fimbria fimbriata, Anodontia sp.; non-symbiotic: Tapes dorsatus, Vasticardium vertebratum, Scutarcopagia sp.). ∆13C values of bulk organic shell matrices, most likely representing mainly original shell protein/chitin biomass, were depleted in thio- and phototrophic bivalves compared to non-symbiotic bivalves. As the bulk organic shell matrix also showed a major depletion of δ15N (down to -2.2 ‰) for thiotrophic bivalves, combined δ13C and δ15N values are useful to differentiate between thio-, phototrophic, and non-symbiotic lifestyles. However, the use of these isotopic signatures for the study of ancient bivalves is limited by the preservation of the bulk organic shell matrix in fossils. Substantial alteration was clearly shown by detailed microscopic analyses of fossil (late Pleistocene) T. maxima and Trachycardium lacunosum shell, demonstrating a severe loss of quantity and quality of bulk organic shell matrix with time. Likewise, the composition and δ13C-values of lipids from empty shells indicated that a large part of these compounds derived from prokaryotic decomposers. The use of lipids from ancient shells for the reconstruction of the bivalve's life style therefore appears to be restricted. © 2014 John Wiley & Sons Ltd.

Characterizing Photosymbiosis Between Fraginae Bivalves and Symbiodinium Using Phylogenetics and Stable Isotopes

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Jingchun Li

2018-04-01

Full Text Available Photosymbiotic associations between heterotrophic hosts and photosynthetic algae play crucial roles in maintaining the trophic and structural integrity of coral reef ecosystems. The marine bivalve subfamily Fraginae contains both non-symbiotic and photosymbiotic lineages, making it an ideal comparative system to study the origin and evolutionary adaptations of photosymbiosis. The symbiotic species exhibit unique morphological adaptations to photosymbiosis. However, the basic biology of these photosymbiotic relationships, such as symbiont diversity and nutritional benefits, has not been thoroughly characterized. In this study, we examined the general morphology of four Fraginae species occupying different depths (0–10 m: Corculum cardissa, Fragum fragum, Fragum scruposum, and Fragum sueziense. Abundant symbionts were found in the mantle, gill, and part of the foot, contained in tubular networks within host tissues. We used molecular phylogenetics to investigate the algal symbiont community of these Fraginae species. Results showed that symbionts from all four species are dinoflagellates belonging to the Symbiodinium clade C and we did not detect any host-specific or geographic-specific genetic structures within the symbionts. We also used stable carbon isotope analyses to examine whether the cockles are directly utilizing photosynthetically derived carbon sources. All species show less depleted 13C compared to filter-feeding bivalves, suggesting at least part of their organic carbon is derived directly from the symbionts. However, 13C depletion of Fragum sueziense collected from deeper habitats are less distinguishable from filter-feeding bivalves. This indicates that species in deeper habitats may rely less on photosymbiosis due to the reduced light availability. Given that the symbiotic fragines exhibit varying morphologies, habitats, and utilization of symbiont photosynthesis, the subfamily represents an ideal model system to study

The Bivalve Production Chain in Santa Catarina, Brazil, and its Management and Operational Limitations

OpenAIRE

Gallon, Alessandra Vasconcelos; Universidade Federal do Ceará (UFC); Nascimento, Cristiano; Universidade Federal do Paraná - UFPR; Pfitscher, Elisete Dahmer; Universidade Federal de Santa Catarina

2011-01-01

Bivalve farming (mussels and oysters), a major component in the socio-economic development of the state of Santa Catarina, Brazil, combines the activities of public and private agencies in fish farming. Current analysis deals with the management and the operational limitations of the local bivalve production chain. Current exploratory research, undertaken by direct observations and the literature on the subject, employs data quality. Results show that the bivalve production chain, comprising ...

Biological couplings: Classification and characteristic rules

Institute of Scientific and Technical Information of China (English)

无

2009-01-01

The phenomena that biological functions originate from biological coupling are the important biological foundation of multiple bionics and the significant discoveries in the bionic fields. In this paper, the basic concepts related to biological coupling are introduced from the bionic viewpoint. Constitution, classification and characteristic rules of biological coupling are illuminated, the general modes of biological coupling studies are analyzed, and the prospects of multi-coupling bionics are predicted.

Predation and habitat modification synergistically interact to control bivalve recruitment on intertidal mudflats

NARCIS (Netherlands)

van der Heide, T.; Tielens, E.; van der Zee, E.M.; Weerman, E.J.; Holthuijsen, S.; Eriksson, B.K.; Piersma, T.; van de Koppel, J.; Olff, H.

2014-01-01

Bivalves are key components of coastal ecosystems because they link pelagic and benthic food webs, and shape the landscape through habitat modification. Nevertheless, many bivalve stocks have dramatically declined, and recruitment failure due to (anthropogenically-) increased predation by

Predation and habitat modification synergistically interact to control bivalve recruitment on intertidal mudflats

NARCIS (Netherlands)

van der Heide, Tjisse; Tielens, Elske; van der Zee, Els; Weerman, Ellen J.; Holthuijsen, Sander; Eriksson, Britas Klemens; Piersma, Theun; van de Koppel, Johan; Olff, Han

Bivalves are key components of coastal ecosystems because they link pelagic and benthic food webs, and shape the landscape through habitat modification. Nevertheless, many bivalve stocks have dramatically declined, and recruitment failure due to (anthropogenically-) increased predation by

Molecular and Biochemical Methods Useful for the Epigenetic Characterization of Chromatin-Associated Proteins in Bivalve Molluscs

Directory of Open Access Journals (Sweden)

Ciro Rivera-Casas

2017-08-01

Full Text Available Bivalve molluscs constitute a ubiquitous taxonomic group playing key functions in virtually all ecosystems, and encompassing critical commercial relevance. Along with a sessile and filter-feeding lifestyle in most cases, these characteristics make bivalves model sentinel organisms routinely used for environmental monitoring studies in aquatic habitats. The study of epigenetic mechanisms linking environmental exposure and specific physiological responses (i.e., environmental epigenetics stands out as a very innovative monitoring strategy, given the role of epigenetic modifications in acclimatization and adaptation. Furthermore, the heritable nature of many of those modifications constitutes a very promising avenue to explore the applicability of epigenetic conditioning and selection in management and restoration strategies. Chromatin provides a framework for the study of environmental epigenetic responses. Unfortunately, chromatin and epigenetic information are very limited in most non-traditional model organisms and even completely lacking in most environmentally and ecologically relevant organisms. The present work aims to provide a comprehensive and reproducible experimental workflow for the study of bivalve chromatin. First, a series of guidelines for the molecular isolation of genes encoding chromatin-associated proteins is provided, including information on primers suitable for conventional PCR, Rapid Amplification of cDNA Ends (RACE, genome walking and quantitative PCR (qPCR experiments. This section is followed by the description of methods specifically developed for the analysis of histone and SNBP proteins in different bivalve tissues, including protein extraction, purification, separation and immunodetection. Lastly, information about available antibodies, their specificity and performance is also provided. The tools and protocols described here complement current epigenetic analyses (usually limited to DNA methylation by incorporating

Short-term fluctuations in bivalve larvae compared with some environmental factors in a coastal lagoon (South Portugal

Directory of Open Access Journals (Sweden)

Luis M.Z. Chícaro

2000-12-01

Full Text Available In this study, short-term fluctuations in bivalve larvae were compared with some triggering factors for a period of sixteen months. Data on the abundance of planktonic larvae, collected two to three times a week were related to water temperature, salinity, wind velocity, tidal amplitude and chlorophyll a. Higher densities of planktonic bivalve larvae were caught between May and August, but intense fluctuations in abundance were observed. Planktonic bivalve larvae of eighteen taxa were identified. Larvae of Mytilus galloprovincialis, Cerastoderma edule, Ruditapes decussates and Venerupis spp. were the most abundant. The seasonal fluctuations of bivalve abundance seem to be controlled by temperature, the major factor in the timing of the reproduction of bivalves. Nevertheless, advection may be also a key factor during the planktonic life of bivalve species in coastal systems, such as the Ria Formosa.

Bivalves: From individual to population modelling

NARCIS (Netherlands)

Saraiva, S.; van der Meer, J.; Kooijman, S.A.L.M.

2014-01-01

An individual based population model for bivalves was designed, built and tested in a 0D approach, to simulate the population dynamics of a mussel bed located in an intertidal area. The processes at the individual level were simulated following the dynamic energy budget theory, whereas initial egg

Development of human impact on suspension-feeding bivalves in coastal soft-bottom ecosystems

NARCIS (Netherlands)

Wolff, Wim J.; Dame, RF; Olenin, S

2005-01-01

Suspension-feeding bivalves often may occur in large concentrations ('beds') on tidal flats. This makes them attractive for human consumers and the archaeological record shows collection of bivalves by coastal populations already tens of thousands of years ago. In modem time human interference with

Histological techniques for marine bivalve mollusks and crustaceans, 2nd edition

OpenAIRE

Howard, Dorothy W.; Lewis, Earl J.; Keller, B. Jane; Smith, Cecelia S.

2004-01-01

Investigators at the Cooperative Oxford Laboratory (COL) diagnose and study crustaceans, mollusks, finfish, and a variety of other marine and estuarine invertebrates to assess animal health. This edition updates the Histological Techniques for Marine Bivalve Mollusks manual by Howard and Smith (1983) with additional chapters on molluscan and crustacean techniques. The new edition is intended to serve as a guide for histological processing of shellfish, principally bivalve mollusks and crustac...

Nursery function of coastal temperate benthic habitats: New insight from the bivalve recruitment perspective

Science.gov (United States)

Barbier, Pierrick; Meziane, Tarik; Forêt, Martin; Tremblay, Réjean; Robert, René; Olivier, Frédéric

2017-03-01

Marine habitat function has been typically investigated in terms of biogeochemical regulation but rarely in terms of population renewal, which is mainly controlled by recruitment dynamics. The recruitment phase is crucial for organisms with a bentho-pelagic life cycle, such as bivalves, and it regulates the population renewal success. This study provides new insight on the role of temperate benthic habitats on bivalve recruitment, as a function of nursery areas. Six dominant benthic habitats of the Chausey archipelago (Normandy, France) were studied. In each habitat, bivalve recruit assemblages were described at the end of two reproductive seasons. Furthermore, Ostrea edulis juveniles were immerged on each habitat during two months to compare growth performances and feeding status, estimated by fatty acid composition. Recruit assemblages differ from each habitat according to sediment grain-size composition and bathymetrical levels. Subtidal habitats, and especially Crepidula fornicata banks and Glycymeris glycymeris coarse sands, supported the highest species abundance and richness of recruits. All O. edulis juveniles fed on the same trophic resources but digestive glands of juveniles from C. fornicata banks were more concentrated in total fatty acids than those from subtidal G. glycymeris coarse sands and maerl banks. Our results depict the key role of subtidal and structured habitats, composed of ecosystem engineers, in enhancing bivalve recruitment and extending the bivalve population renewal. This study suggests that the crucial role of these habitats as bivalve nurseries must be integrated in management perspectives. 2-column fitting image. 1-column fitting image.

A Darriwilian (Middle Ordovician bivalve-dominated molluscan fauna from the Stairway Sandstone, Amadeus Basin, central Australia

Directory of Open Access Journals (Sweden)

Kristian G. Jakobsen

2016-12-01

Full Text Available A bivalve-dominated molluscan fauna is described from the Darriwilian (Middle Ordovician Stairway Sandstone, Amadeus Basin, central Australia. The fauna comprises 16 species of bivalves and rostroconchs plus six gastropod species which are treated under open nomenclature. Two new bivalves, Sthenodonta paenesymmetrica sp. nov. and Modiolopsis pojetai sp. nov., are described. The relatively low-diverse molluscan fauna constitutes around 62% of the total benthic macrofauna. Approximately 75% of the molluscs comprise bivalves, especially nuculoids, which were biogeographically restricted to low latitudes during the Ordovician. The molluscan assemblage displays a very high degree of endemism at species level, though the bivalve Sthenodonta eastii also occurs in the Georgina Basin farther to the northeast. This indicates a possible marine connective seaway between the Georgina and Amadeus basins during the Darriwilian. Nuculites, Cyrtodonta, and Modiolopsis are cosmopolitan and previously reported from North China, Avalonia, and Southern Gondwana.

Mobile Element Evolution Playing Jigsaw - SINEs in Gastropod and Bivalve Mollusks.

Science.gov (United States)

Matetovici, Irina; Sajgo, Szilard; Ianc, Bianca; Ochis, Cornelia; Bulzu, Paul; Popescu, Octavian; Damert, Annette

2016-01-06

SINEs (Short INterspersed Elements) are widely distributed among eukaryotes. Some SINE families are organized in superfamilies characterized by a shared central domain. These central domains are conserved across species, classes, and even phyla. Here we report the identification of two novel such superfamilies in the genomes of gastropod and bivalve mollusks. The central conserved domain of the first superfamily is present in SINEs in Caenogastropoda and Vetigastropoda as well as in all four subclasses of Bivalvia. We designated the domain MESC (Romanian for MElc-snail and SCoica-mussel) because it appears to be restricted to snails and mussels. The second superfamily is restricted to Caenogastropoda. Its central conserved domain-Snail-is related to the Nin-DC domain. Furthermore, we provide evidence that a 40-bp subdomain of the SINE V-domain is conserved in SINEs in mollusks and arthropods. It is predicted to form a stable stem-loop structure that is preserved in the context of the overall SINE RNA secondary structure in invertebrates. Our analysis also recovered short retrotransposons with a Long INterspersed Element (LINE)-derived 5' end. These share the body and/or the tail with transfer RNA (tRNA)-derived SINEs within and across species. Finally, we identified CORE SINEs in gastropods and bivalves-extending the distribution range of this superfamily. © The Author(s) 2016. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution.

Dioxin-like chemicals in bivalves and sediment collected from around Australia

Energy Technology Data Exchange (ETDEWEB)

Mueller, J.F.; Muller, R.; Goudkamp, K. [EnTox, The University of Queensland, Brisbane (AU)] (and others)

2004-09-15

The aquatic environment is a significant sink for persistent organic pollutants including dioxin-like chemicals. Besides continuous investigations into sources of higher chlorinated PCDD that have initially been found in soils, and later in dugong and sediments little is known about the levels of dioxin-like chemicals in Australia's aquatic environment. In 2002 the National Dioxin Program (NDP) was commissioned by the Department of Environment and Heritage, Australia. One focus of the NDP was to evaluate background levels of dioxin-like chemicals in Australia's environment. One component of the 'Environmental Levels' project aimed to identify dioxinlike chemicals in the aquatic environment including bivalves collected in both marine, estuarine and freshwater systems. Here we report results from the NDP aquatic study with a particular emphasis on the levels of dioxin-like chemicals in bivalves and sediments respectively in areas from where the bivalves were collected.

Bioaccumulation of 210Po in common gastropod and bivalve species from the northern Gulf.

Science.gov (United States)

Uddin, S; Bebhehani, M

2014-06-01

This study sets the baseline for the concentration of the natural-series radionuclide polonium-210 in two species of gastropods and four species of bivalves that are common to the Northern Arabian/Persian Gulf. (210)Po is primarily absorbed from water and via ingestion of detrital material by gastropoda and bivalves. This concentrated (210)Po can then be passed along to the next trophic level of the marine food web. The lowest (210)Po concentration was measured in the gastropod Stomatella auricular (10.36-12.39Bq kg(-1)dry) and the highest in the bivalve Marica marmorata (193.51-215.60Bq kg(-1)dry). The measured concentration factor for these molluscs in the northern Gulf varied between 4.8 and 115×10(3), values very similar to the IAEA recommended value for bivalves and gastropods of 2×10(4). Copyright © 2014 Elsevier Inc. All rights reserved.

Element availability of bivalve with symbiotic zooxanthellae in coral sea area as studied by multielement profiling analysis

Science.gov (United States)

Itoh, A.; Kabe, N.

2008-12-01

In coral sea, a characteristic ecosystem is formed by many kinds of marine animals and plants, although seawater is uneutrophic. This may be explained by the fact that various chemical species with bioessentiality are effectively taken and used by lower animals and plants in coral sea area. A symbiotic relationship often found among different animals and plants in this area is considered to be working as one of such processes. However, the specific bioavailability of the elements for the marine animals and plants in coral reef area has not been studied from the viewpoints of trace and ultratrace elements. It is found by the present authors that bivalve with symbiotic zooxanthellae (Tridacna crocea) living on coral reef had relatively higher bio- accumulation factors for many bio-essential elements than other kinds of bivalves, although they live in the uneutrophic sea area. The present authors focused on Tridacna crocea as one of the symbiotic animals. Thus, in the present study, at first, multielement determination of major-to-ultratrace elements (about 20 elements) in each organ of Tridacna crocea with symbiotic zooxanthellae, were carried out by ICP-AES, ICP- MS, and CHN coder. At Second, the specific bioavailability of trace and ultratrace elements in Tridacna crocea was discussed on the multielement data for seawater, seaweeds, and other bivalves in coral sea area.

Optimal designs of mollusk shells from bivalves to snails.

Science.gov (United States)

Okabe, Takuya; Yoshimura, Jin

2017-02-10

Bivalve, ammonite and snail shells are described by a small number of geometrical parameters. Raup noted that the vast majority of theoretically possible shell forms do not occur in nature. The constraint factors that regulate the biased distribution of natural form have long since been an open problem in evolution. The problem of whether natural shell form is a result of optimization remains unsolved despite previous attempts. Here we solve this problem by considering the scaling exponent of shell thickness as a morphological parameter. The scaling exponent has a drastic effect on the optimal design of shell shapes. The observed characteristic shapes of natural shells are explained in a unified manner as a result of optimal utilization of shell material resources, while isometric growth in thickness leads to impossibly tight coiling.

Effect of dietary polyunsaturated fatty acids on reproductive output and larval growth of bivalves

NARCIS (Netherlands)

Hendriks, I.E.; Van Duren, L.A.; Herman, P.M.J.

2003-01-01

The pre-spawning condition of adult bivalves is influenced by quantity and quality of available food. For bivalves, the essential polyunsaturated fatty acids (PUFAs) eicosapentaenoic acid (EPA) 20:5(n-3) and docosahexaenoic acid (DHA) 22:6(n-3) are presumed to determine the nutritional value of

Travel report Mauritania bivalve Molluscs october 2008

NARCIS (Netherlands)

Poelman, M.

2008-01-01

During the last four years Mauritania has been working on the completion of a Food Safety Program of Bivalve Mollusks, in order to obtain an export approval by the Europe Union. During the preparations for an inspection by the FVO (Food and Veterinary Office) no fisheries or production activities

Linking changes in subcellular cadmium distribution to growth and mortality rates in transplanted freshwater bivalves (Pyganodon grandis)

International Nuclear Information System (INIS)

Perceval, Olivier; Couillard, Yves; Pinel-Alloul, Bernadette; Campbell, Peter G.C.

2006-01-01

Relationships between Cd accumulation and subcellular distribution, and growth and mortality rates were examined in the freshwater bivalve Pyganodon grandis in a transplant experiment. Organisms were transferred from a clean lacustrine site to four lakes situated along a Cd concentration gradient in the mining region of Rouyn-Noranda. The bivalves were maintained in open enclosures placed in the bottom sediments of the littoral zone of all five lakes for 400 days. At the end of the experiment, metallothionein (MT) was measured in the bivalve gills with a Hg-saturation assay and Cd partitioning among the various cytosolic protein pools was determined by size-exclusion chromatography. Marked differences were observed among the five sites: the range in calculated free-cadmium ion concentrations in water overlying the sediments was 35-fold whereas Cd concentrations in the gill cytosol of the transplanted bivalves varied three-fold. In the transplanted bivalves, the distribution of gill Cd among the various cytosolic complexes also varied significantly among sites. For bivalves transplanted to the three most contaminated sites, Cd concentrations in the high molecular weight pool (HMW > 25 kDa) were significantly higher than the baseline levels determined from bivalves caged at the reference site; a similar trend was seen for Cd concentrations in the metallothionein pool (Cd-MT). For bivalves transferred to two of the high contamination sites, proportionately less of the gill cytosolic Cd was sequestered (i.e. detoxified) by MT-like proteins. Reductions in survival were also observed at these two sites, and these elevated mortalities, in turn, were consistent with the absence of indigenous bivalve populations at these sites. This result is compatible with our recent work on P. grandis populations living in lakes of the Rouyn-Noranda area, in which we demonstrated that excessive accumulation of Cd in the HMW pool of the gill cytosol of the individual mollusks could be

Bivalve aquaculture transfers in Atlantic Europe. Part A: Transfer activities and legal framework

DEFF Research Database (Denmark)

Muehlbauer, F.; Fraser, D.; Brenner, M.

2014-01-01

environment and address economic considerations remains unanswered. This study provides the first overview of bivalve transfer activities for aquaculture purposes along the European Atlantic coast. Existing international and EU legislation is described, and potential weaknesses in the existing legislative......Intentional transfers of numerous bivalve species have had a long tradition and are commonly conducted along the European Atlantic coast. However numerous studies have concluded that intentional transfer of species for aquaculture purposes is one of the most principal vectors for the introduction...... frameworks are discussed. Recommendations for the development of integrated risk assessment methods are given. These may help to minimize the intrinsic threats of transfer activities in marine environments. The resulting impacts and effects of transfer activities of bivalves for aquaculture purpose...

Morphometric Studies on Anodonta Anatine Bivalve Population from the Dognecea Lake

Directory of Open Access Journals (Sweden)

Marian Bura

2011-10-01

Full Text Available In the Dognecea Lake, near town Bocsa in Caras-Severin county a strong bivalve population has been discovered from the duck mussel specie (Anodonta anatina. Harvested individuals were transported to the Aquaculture laboratory where measurements and correct identification was made. This specie is considered endangered but in Banat area, especially in the Dognecea Lake it is well represented, having an ecological importance, but the bivalve can have an economical importance too, due to the high percentage of edible part of 56.5%.

Abnormalities in bivalve larvae from the Puck Bay (Gulf of Gdansk, southern Baltic Sea) as an indicator of environmental pollution.

Science.gov (United States)

Lasota, Rafal; Gierszewska, Katarzyna; Viard, Frédérique; Wolowicz, Maciej; Dobrzyn, Katarzyna; Comtet, Thierry

2018-01-01

This study described the occurrence of abnormalities in bivalve larvae from the Puck Bay. Analyses of plankton samples collected in 2012-2013 showed that larval Mytilus trossulus, Mya arenaria, and Cerastoderma glaucum exhibited abnormalities that could indicate adverse environmental impacts. The deformities were mainly in shells, but missing soft tissue fragments and protruding vela were also noted. In addition to larval studies, we analyzed benthic postlarvae of Mytilus trossulus. Interestingly, grooves and notches at different locations of the prodissoconch, dissoconch, and shell margin were observed. Some of these deformations were reminiscent of the indentations found on the shell edge of larvae. Comparing the proportion of abnormal postlarvae to larvae with shell abnormalities suggested that the survival of larvae with shell abnormalities was low. Overall, our results suggested that the ratio of abnormal bivalve larvae could be used as an indicator of the biological effects of hazardous substances in the pelagic environment. Copyright © 2017 Elsevier Ltd. All rights reserved.

Proteomic Profiling of Cytosolic Glutathione Transferases from Three Bivalve Species: Corbicula fluminea, Mytilus galloprovincialis and Anodonta cygnea

Directory of Open Access Journals (Sweden)

José Carlos Martins

2014-01-01

Full Text Available Suspension-feeding bivalves are considered efficient toxin vectors with a relative insensitivity to toxicants compared to other aquatic organisms. This fact highlights the potential role of detoxification enzymes, such as glutathione transferases (GSTs, in this bivalve resistance. Nevertheless, the GST system has not been extensively described in these organisms. In the present study, cytosolic GSTs isoforms (cGST were surveyed in three bivalves with different habitats and life strategies: Corbicula fluminea, Anodonta cygnea and Mytilus galloprovincialis. GSTs were purified by glutathione-agarose affinity chromatography, and the collection of expressed cGST classes of each bivalve were identified using a proteomic approach. All the purified extracts were also characterized kinetically. Results reveal variations in cGST subunits collection (diversity and properties between the three tested bivalves. Using proteomics, four pi-class and two sigma-class GST subunits were identified in M. galloprovincialis. C. fluminea also yielded four pi-class and one sigma-class GST subunits. For A. cygnea, two mu-class and one pi-class GST subunits were identified, these being the first record of GSTs from these freshwater mussels. The affinity purified extracts also show differences regarding enzymatic behavior among species. The variations found in cGST collection and kinetics might justify diverse selective advantages for each bivalve organism.

An integrated ecosystem approach for assessing the potential role of cultivated bivalve shells as part of the carbon trading system

DEFF Research Database (Denmark)

Filgueira, Ramón; Byron, C.J.; Comeau, L.A.

2015-01-01

, is needed to provide a rigorous assessment of the role of bivalve mariculture in the CO2 cycle. On the other hand, the discussion about the inclusion of shells of cultured bivalves into the carbon trading system should be framed in the context of ecosystem goods and services. Humans culture bivalves......The role of bivalve mariculture in the CO2 cycle has been commonly evaluated as the balance between respiration, shell calcium carbonate sequestration and CO2 release during biogenic calcification. However, this approach neglects the ecosystem implications of cultivating bivalves at high densities...... with the aim of producing food, not sequestering CO2 in their shells, therefore the main ecosystem good provided by bivalve aquaculture is meat production, and shells should be considered as by-products of this human activity. This reasoning is key to split the CO2 released due to respiration between meat...

Lower Oligocene bivalves of Ramanian Stage from Kachchh ...

Indian Academy of Sciences (India)

Sehe area of western Kachchh considered their. Bed Nos. 4 and 5 as .... with very thin population. The Bermoti stream ...... Recent; Indo–Pacific. Subgenus: .... Type species: Cardium discors Lamarck' 1805; T. Eocene–Miocene; Europe–Asia ..... Shuto Tsugio 1971 Neogene Bivalves from Panay Island, the. Philippines.

76 FR 65200 - Risk Assessment on Norovirus in Bivalve Molluscan Shellfish: Request for Comments and for...

Science.gov (United States)

2011-10-20

... transmission of norovirus from infected or ill food workers in food manufacturing or retail establishments to... Molluscan Shellfish Contamination Levels During Food Preparation and Bivalve Molluscan Shellfish Consumption... and other factors influencing bivalve molluscan shellfish contamination levels during food preparation...

Light and scanning electron microscopic studies of Unionicola tetrafurcatus (Acari: Unionicolidae) infecting four freshwater bivalve species with referring to histopathological effect on its hosts.

Science.gov (United States)

Abdel-Gaber, Rewaida; Fol, Mona; Al Quraishy, Saleh

2018-05-08

Water mites of the genus Unionicola are the most common symbionts of freshwater bivalves. During the current investigation, a total of 120 live freshwater mussels [Corbicula fluminea (Veneroida), Coelatura aegyptiaca (Unionoidea) Mutela rostrata and Chambardia rubens (Mutelidae)], were collected from 2 localities in Tura (Helwan Governorate) and El Kanater (Qaluobiya Governorate), Egypt. Only 3 of the 4 bivalve species listed are considered freshwater bivalves (members of Unionoidea). While, C. fluminea belong to the family Cyrenidae within Veneroida. The collected mussels were dissected and examined for the presence of unionicolid mites. It was found that 30.83% (37/120) were infected with a single mite species Unionicola tetrafurcatus (Unionicolidae). The highest prevalence was observed during the summer with 83.33% (25/30), whereas the least was observed in autumn, i.e. 33.33% (10/30). Mites were recovered from the gills, gonads, and visceral mass of mussel hosts. gills of host mussels were the primary site of oviposition for unionicola mites. Smaller bivalves in size had significantly greater numbers of mites than larger ones in size. Numbers of mites per host species was variable and the highest prevalence level of 83.33% (25/30) was recorded in C. fluminea, while, the lowest one of 16.66% (5/30) was found in C. rubens. Morphological and morphometric characterizations of mites revealed some differences between the present species and other related Unionicola. Histopathological responses of host mussels to the eggs, larvae, and cuticular remnants of U. tetrafurcatus were also studied. Therefore, the present study demonstrated that freshwater bivalves have a new host and locality records for infection with U. tetrafurcatus. Future studies are recommended to include advanced molecular characteristics for these mites.

Trophic Dynamics of Filter Feeding Bivalves in the Yangtze Estuarine Intertidal Marsh: Stable Isotope and Fatty Acid Analyses

Science.gov (United States)

Wang, Sikai; Jin, Binsong; Qin, Haiming; Sheng, Qiang; Wu, Jihua

2015-01-01

Benthic bivalves are important links between primary production and consumers, and are essential intermediates in the flow of energy through estuarine systems. However, information on the diet of filter feeding bivalves in estuarine ecosystems is uncertain, as estuarine waters contain particulate matter from a range of sources and as bivalves are opportunistic feeders. We surveyed bivalves at different distances from the creek mouth at the Yangtze estuarine marsh in winter and summer, and analyzed trophic dynamics using stable isotope (SI) and fatty acid (FA) techniques. Different bivalve species had different spatial distributions in the estuary. Glauconome chinensis mainly occurred in marshes near the creek mouth, while Sinonovacula constricta preferred the creek. Differences were found in the diets of different species. S. constricta consumed more diatoms and bacteria than G. chinensis, while G. chinensis assimilated more macrophyte material. FA markers showed that plants contributed the most (38.86 ± 4.25%) to particular organic matter (POM) in summer, while diatoms contributed the most (12.68 ± 1.17%) during winter. Diatoms made the largest contribution to the diet of S. constricta in both summer (24.73 ± 0.44%) and winter (25.51 ± 0.59%), and plants contributed no more than 4%. This inconsistency indicates seasonal changes in food availability and the active feeding habits of the bivalve. Similar FA profiles for S. constricta indicated that the bivalve had a similar diet composition at different sites, while different δ13C results suggested the diet was derived from different carbon sources (C4 plant Spartina alterniflora and C3 plant Phragmites australis and Scirpus mariqueter) at different sites. Species-specific and temporal and/or spatial variability in bivalve feeding may affect their ecological functions in intertidal marshes, which should be considered in the study of food webs and material flows in estuarine ecosystems. PMID:26261984

Environmentally applications of invasive bivalves for water and wastewater decontamination.

Science.gov (United States)

Gomes, João; Matos, Ana; Quinta-Ferreira, Rosa M; Martins, Rui C

2018-07-15

The environmental and economic impact of invasive bivalve species implies the development of suitable pest management strategies. Chemical control is the most usual approach. However, the production of toxic intermediates as well as the unavoidable impact over non target biota is of special concern. Another approach consists on the physical removal of the animals from the invaded sites. The high biofiltration and bioaccumulation capacity of such animals make them interesting for the removal of contaminants from water and wastewater. In this context, environmental applications can be given for these pests encompassing nutrients removal for the recovery of eutrophic sites, water disinfection, organic and metal contaminants abatement. These approaches may be integrated with pest management where the physical removed animals from the invaded spots could be used for assembling biofilter for water and wastewater decontamination. However, some drawbacks must be addressed before proposing such alternative. In fact, the further spreading of the bivalves into non-invaded sites must be avoided. Moreover, some operational questions must be addressed such as the fate of contaminated animals after biofiltration. Bearing in mind the interesting results already available in this subject, this paper aims to critically overview literature regarding the environmental applications of invasive bivalves. Copyright © 2018 Elsevier B.V. All rights reserved.

Spermatozoan ultrastructure in the trigonioid bivalve Neotrigonia margaritacea Lamarck (Mollusca): Comparison with other bivalves, especially Trigonioida and Unionoida

Science.gov (United States)

Healy, J. M.

1996-06-01

Spermatozoa of the trigonioid bivalve Neotrigonia margaritacea (Lamarck) (Trigoniidae, Trigonioida) are examined ultrastructurally. A cluster of discoidal, proacrosomal vesicles (between 9 to 15 in number) constitutes the acrosomal complex at the nuclear apex. The nucleus is short (2.4 2.6 μm long, maximum diameter 2.2 μm), blunt-conical in shape, and exhibits irregular lacunae within its contents. Five or sometimes four round mitochondria are impressed into shallow depressions in the base of the nucleus as is a discrete centriolar fossa. The mitochondria surround two orthogonally arranged centrioles to form, collectively, the midpiece region. The distal centriole, anchored by nine satellite fibres to the plasma membrane, acts as a basal body to the sperm flagellum. The presence of numerous proacrosomal vesicles instead of a single, conical acrosomal vesicle sets Neotrigonia (and the Trigonioida) apart from other bivalves, with the exception of the Unionoida which are also known to exhibit this multivesicular condition. Spermatozoa of N. margaritacea are very similar to those of the related species Neotrigonia bednalli (Verco) with the exception that the proacrosomal vesicles of N. margaritacea are noticeably larger than those of N. bednalli.

Bioaccumulation of selenium and induced biological effects in the filter feeding bivalve Corbicula fluminea: influence of ventilatory activity, selenium speciation and route of transfer; Bioaccumulation du selenium et effets biologiques induits chez le bivalve filtreur Corbicula fluminea: prise en compte de l'activite ventilatoire, de la speciation du selenium et de la voie de contamination

Energy Technology Data Exchange (ETDEWEB)

Fournier, E

2005-10-15

Selenium is an essential micro-nutrient for most of living organisms. However, toxic effects in several ecosystems have been reported in the literature. Toxicity comprehension is difficult due to the complexity of Se oxidation states in the environment. The aim of this thesis work was to acquire knowledge on the physiological and environmental factors involved in bioaccumulation and toxicity processes in the freshwater filter-feeding bivalve C. fluminea. The aims were: i) to define what the factors involved in Se bioaccumulation processes in the bivalve are, ii) to characterize Se bioaccumulation at different biological organisation levels, iii) to investigate Se toxic effects. First experiments, carried out for short term exposure duration (3 days), have permitted to underline the importance of Se chemical speciation in bioaccumulation processes in C. fluminea. It has been shown that the organic form, seleno-methionine, was much more bio-available than the inorganic forms, selenite and selenate. Moreover, the route of transfer was determinant in those processes. Inorganic forms have been better extracted by trophic route, whereas seleno-methionine has been better extracted by the direct route. In our experimental conditions, ventilation of the bivalve has not been a limiting factor for Se bioaccumulation by the direct route, whereas it has been for bioaccumulation by the trophic route. Ventilation has been largely modified by the presence of dissolved selenite and seleno-methionine. We have shown that the kinetics of seleno-methionine bioaccumulation are much more fast than those of selenite. Moreover, when introduced as SeMet, internalized Se appeared to be relatively remanent in soft tissues of C. fluminea in comparison with Se internalized when introduced as selenite. Subcellular and molecular distributions of these forms were very different. Finally, it has been shown that seleno-methionine and selenite could generate weak alterations of the anti

Geochemical aspects of Meretrix casta (bivalve) shells of Vellar ...

African Journals Online (AJOL)

SAM

2014-05-14

May 14, 2014 ... The bivalve mollusk, Meretrix casta shells are abundant in the Vellar estuary along the East .... the Shervarayan hills of Salem District in Tamil Nadu, India. .... coast of Peninsular Malaysia and its potential as biomaterial for use.

Evaluation of γ-radiation-induced DNA damage in two species of bivalves and their relative sensitivity using comet assay

International Nuclear Information System (INIS)

Praveen Kumar, M.K.; Shyama, S.K.; Sonaye, B.S.; Naik, U Roshini; Kadam, S.B.; Bipin, P.D.; D’costa, A.; Chaubey, R.C.

2014-01-01

Highlights: • Possible genotoxic effect of accidental exposure of aquatic fauna to γ radiation. • Relative sensitivity of bivalves to γ radiation is also analyzed using comet assay. • γ radiation induced significant genetic damage in both the species of bivalves. • P. malabarica and M. casta exhibited a similar level of sensitivity to γ radiation. • Comet assay may be used as a biomarker for the environmental biomonitoring. - Abstract: Ionizing radiation is known to induce genetic damage in diverse groups of organisms. Under accidental situations, large quantities of radioactive elements get released into the environment and radiation emitted from these radionuclides may adversely affect both the man and the non-human biota. The present study is aimed (a) to know the genotoxic effect of gamma radiation on aquatic fauna employing two species of selected bivalves, (b) to evaluate the possible use of ‘Comet assay’ for detecting genetic damage in haemocytes of bivalves as a biomarker for environmental biomonitoring and also (c) to compare the relative sensitivity of two species of bivalves viz. Paphia malabarica and Meretrix casta to gamma radiation. The comet assays was optimized and validated using different concentrations (18, 32 and 56 mg/L) of ethyl methanesulfonate (EMS), a direct-acting reference genotoxic agent, to which the bivalves were exposed for various times (24, 48 and 72 h). Bivalves were irradiated (single acute exposure) with 5 different doses (viz. 2, 4, 6, 8 and 10 Gy) of gamma radiation and their genotoxic effects on the haemocytes were studied using the comet assay. Haemolymph was collected from the adductor muscle at 24, 48 and 72 h of both EMS-exposed and irradiated bivalves and comet assay was carried out using standard protocol. A significant increase in DNA damage was observed as indicated by an increase in % tail DNA damage at different concentrations of EMS and all the doses of gamma radiation as compared to controls in

Evaluation of γ-radiation-induced DNA damage in two species of bivalves and their relative sensitivity using comet assay

Energy Technology Data Exchange (ETDEWEB)

Praveen Kumar, M.K., E-mail: here.praveen@gmail.com [Department of Zoology, Goa University, Goa 403206 (India); Shyama, S.K., E-mail: skshyama@gmail.com [Department of Zoology, Goa University, Goa 403206 (India); Sonaye, B.S. [Department of Radiation Oncology, Goa Medical College, Goa (India); Naik, U Roshini; Kadam, S.B.; Bipin, P.D.; D’costa, A. [Department of Zoology, Goa University, Goa 403206 (India); Chaubey, R.C. [Radiation Biology and Health Science Division, Bhabha Atomic Research Centre, Mumbai (India)

2014-05-01

Highlights: • Possible genotoxic effect of accidental exposure of aquatic fauna to γ radiation. • Relative sensitivity of bivalves to γ radiation is also analyzed using comet assay. • γ radiation induced significant genetic damage in both the species of bivalves. • P. malabarica and M. casta exhibited a similar level of sensitivity to γ radiation. • Comet assay may be used as a biomarker for the environmental biomonitoring. - Abstract: Ionizing radiation is known to induce genetic damage in diverse groups of organisms. Under accidental situations, large quantities of radioactive elements get released into the environment and radiation emitted from these radionuclides may adversely affect both the man and the non-human biota. The present study is aimed (a) to know the genotoxic effect of gamma radiation on aquatic fauna employing two species of selected bivalves, (b) to evaluate the possible use of ‘Comet assay’ for detecting genetic damage in haemocytes of bivalves as a biomarker for environmental biomonitoring and also (c) to compare the relative sensitivity of two species of bivalves viz. Paphia malabarica and Meretrix casta to gamma radiation. The comet assays was optimized and validated using different concentrations (18, 32 and 56 mg/L) of ethyl methanesulfonate (EMS), a direct-acting reference genotoxic agent, to which the bivalves were exposed for various times (24, 48 and 72 h). Bivalves were irradiated (single acute exposure) with 5 different doses (viz. 2, 4, 6, 8 and 10 Gy) of gamma radiation and their genotoxic effects on the haemocytes were studied using the comet assay. Haemolymph was collected from the adductor muscle at 24, 48 and 72 h of both EMS-exposed and irradiated bivalves and comet assay was carried out using standard protocol. A significant increase in DNA damage was observed as indicated by an increase in % tail DNA damage at different concentrations of EMS and all the doses of gamma radiation as compared to controls in

The miRNA biogenesis in marine bivalves

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Umberto Rosani

2016-03-01

Full Text Available Small non-coding RNAs include powerful regulators of gene expression, transposon mobility and virus activity. Among the various categories, mature microRNAs (miRNAs guide the translational repression and decay of several targeted mRNAs. The biogenesis of miRNAs depends on few gene products, essentially conserved from basal to higher metazoans, whose protein domains allow specific interactions with dsRNA. Here, we report the identification of key genes responsible of the miRNA biogenesis in 32 bivalves, with particular attention to the aquaculture species Mytilus galloprovincialis and Crassostrea gigas. In detail, we have identified and phylogenetically compared eight evolutionary conserved proteins: DROSHA, DGCR8, EXP5, RAN, DICER TARBP2, AGO and PIWI. In mussels, we recognized several other proteins participating in the miRNA biogenesis or in the subsequent RNA silencing. According to digital expression analysis, these genes display low and not inducible expression levels in adult mussels and oysters whereas they are considerably expressed during development. As miRNAs play an important role also in the antiviral responses, knowledge on their production and regulative effects can shed light on essential molecular processes and provide new hints for disease prevention in bivalves.

Systematics, functional morphology and distribution of a bivalve (Apachecorbula muriatica gen. et sp. nov.) from the rim of the 'Valdivia Deep' brine pool in the Red Sea

KAUST Repository

Oliver, Pere Graham

2014-11-11

The deep brine pools of the Red Sea comprise extreme, inhospitable habitats yet house microbial communities that potentially may fuel adjacent fauna. We here describe a novel bivalve from a deep-sea (1525 m) brine pool in the Red Sea, where conditions of high salinity, lowered pH, partial anoxia and high temperatures are prevalent. Remotely operated vehicle (ROV) footage showed that the bivalves were present in a narrow (20 cm) band along the rim of the brine pool, suggesting that it is not only tolerant of such extreme conditions but is also limited to them. The bivalve is a member of the Corbulidae and named Apachecorbula muriatica gen. et sp. nov. The shell is atypical of the family in being modioliform and thin. The semi-infaunal habit is seen in ROV images and reflected in the anatomy by the lack of siphons. The ctenidia are large and typical of a suspension feeding bivalve, but the absence of \\'guard cilia\\' and the greatly reduced labial palps suggest that it is non-selective as a response to low food availability. It is proposed that the low body mass observed is a consequence of the extreme habitat and low food availability. It is postulated that the observed morphology of Apachecorbula is a result of paedomorphosis driven by the effects of the extreme environment on growth but is in part mitigated by the absence of high predation pressures. © Marine Biological Association of the United Kingdom, 2014.

Evaluation of γ-radiation-induced DNA damage in two species of bivalves and their relative sensitivity using comet assay.

Science.gov (United States)

Praveen Kumar, M K; Shyama, S K; Sonaye, B S; Naik, U Roshini; Kadam, S B; Bipin, P D; D'costa, A; Chaubey, R C

2014-05-01

Ionizing radiation is known to induce genetic damage in diverse groups of organisms. Under accidental situations, large quantities of radioactive elements get released into the environment and radiation emitted from these radionuclides may adversely affect both the man and the non-human biota. The present study is aimed (a) to know the genotoxic effect of gamma radiation on aquatic fauna employing two species of selected bivalves, (b) to evaluate the possible use of 'Comet assay' for detecting genetic damage in haemocytes of bivalves as a biomarker for environmental biomonitoring and also (c) to compare the relative sensitivity of two species of bivalves viz. Paphia malabarica and Meretrix casta to gamma radiation. The comet assays was optimized and validated using different concentrations (18, 32 and 56 mg/L) of ethyl methanesulfonate (EMS), a direct-acting reference genotoxic agent, to which the bivalves were exposed for various times (24, 48 and 72 h). Bivalves were irradiated (single acute exposure) with 5 different doses (viz. 2, 4, 6, 8 and 10 Gy) of gamma radiation and their genotoxic effects on the haemocytes were studied using the comet assay. Haemolymph was collected from the adductor muscle at 24, 48 and 72 h of both EMS-exposed and irradiated bivalves and comet assay was carried out using standard protocol. A significant increase in DNA damage was observed as indicated by an increase in % tail DNA damage at different concentrations of EMS and all the doses of gamma radiation as compared to controls in both bivalve species. This showed a dose-dependent increase of genetic damage induced in bivalves by EMS as well as gamma radiation. Further, the highest DNA damage was observed at 24h. The damage gradually decreased with time, i.e. was smaller at 48 and 72 h than at 24h post irradiation in both species of bivalves. This may indicate repair of the damaged DNA and/or loss of heavily damaged cells as the post irradiation time advanced. The present study

Ocean Acidification Has Multiple Modes of Action on Bivalve Larvae.

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George G Waldbusser

Full Text Available Ocean acidification (OA is altering the chemistry of the world's oceans at rates unparalleled in the past roughly 1 million years. Understanding the impacts of this rapid change in baseline carbonate chemistry on marine organisms needs a precise, mechanistic understanding of physiological responses to carbonate chemistry. Recent experimental work has shown shell development and growth in some bivalve larvae, have direct sensitivities to calcium carbonate saturation state that is not modulated through organismal acid-base chemistry. To understand different modes of action of OA on bivalve larvae, we experimentally tested how pH, PCO2, and saturation state independently affect shell growth and development, respiration rate, and initiation of feeding in Mytilus californianus embryos and larvae. We found, as documented in other bivalve larvae, that shell development and growth were affected by aragonite saturation state, and not by pH or PCO2. Respiration rate was elevated under very low pH (~7.4 with no change between pH of ~ 8.3 to ~7.8. Initiation of feeding appeared to be most sensitive to PCO2, and possibly minor response to pH under elevated PCO2. Although different components of physiology responded to different carbonate system variables, the inability to normally develop a shell due to lower saturation state precludes pH or PCO2 effects later in the life history. However, saturation state effects during early shell development will carry-over to later stages, where pH or PCO2 effects can compound OA effects on bivalve larvae. Our findings suggest OA may be a multi-stressor unto itself. Shell development and growth of the native mussel, M. californianus, was indistinguishable from the Mediterranean mussel, Mytilus galloprovincialis, collected from the southern U.S. Pacific coast, an area not subjected to seasonal upwelling. The concordance in responses suggests a fundamental OA bottleneck during development of the first shell material

Ocean Acidification Has Multiple Modes of Action on Bivalve Larvae.

Science.gov (United States)

Waldbusser, George G; Hales, Burke; Langdon, Chris J; Haley, Brian A; Schrader, Paul; Brunner, Elizabeth L; Gray, Matthew W; Miller, Cale A; Gimenez, Iria; Hutchinson, Greg

2015-01-01

Ocean acidification (OA) is altering the chemistry of the world's oceans at rates unparalleled in the past roughly 1 million years. Understanding the impacts of this rapid change in baseline carbonate chemistry on marine organisms needs a precise, mechanistic understanding of physiological responses to carbonate chemistry. Recent experimental work has shown shell development and growth in some bivalve larvae, have direct sensitivities to calcium carbonate saturation state that is not modulated through organismal acid-base chemistry. To understand different modes of action of OA on bivalve larvae, we experimentally tested how pH, PCO2, and saturation state independently affect shell growth and development, respiration rate, and initiation of feeding in Mytilus californianus embryos and larvae. We found, as documented in other bivalve larvae, that shell development and growth were affected by aragonite saturation state, and not by pH or PCO2. Respiration rate was elevated under very low pH (~7.4) with no change between pH of ~ 8.3 to ~7.8. Initiation of feeding appeared to be most sensitive to PCO2, and possibly minor response to pH under elevated PCO2. Although different components of physiology responded to different carbonate system variables, the inability to normally develop a shell due to lower saturation state precludes pH or PCO2 effects later in the life history. However, saturation state effects during early shell development will carry-over to later stages, where pH or PCO2 effects can compound OA effects on bivalve larvae. Our findings suggest OA may be a multi-stressor unto itself. Shell development and growth of the native mussel, M. californianus, was indistinguishable from the Mediterranean mussel, Mytilus galloprovincialis, collected from the southern U.S. Pacific coast, an area not subjected to seasonal upwelling. The concordance in responses suggests a fundamental OA bottleneck during development of the first shell material affected only by

Anodontites trapesialis (LAMARCK, 1819: a bivalve parasite of freshwater fishes / Anodontites trapesialis (LAMARCK, 1819: um bivalve parasito de peixes de água doce

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Ângela Teresa Silva-Souza

2008-08-01

Full Text Available The bivalve mollusk Anodontites trapesialis has been indicated as an alternative source for aquaculture because it is considered a food of good nutritional value with a protein content close to that of fish. Its shells can be utilized as fertilizer and mixed to the food of domestic animals, and the nacre can be used to manufacture buttons and crafts. However, the larvae of A. trapesialis, which are the lasidium type, are obligatory parasites of freshwater fishes, and the introduction of this bivalve in fish farm tanks have caused trouble and losses for producers. Nothing is known, however, about their development in these environments. On the other hand, it should be pointed out that A. trapesialis is on Brazil’s list of species threatened with extinction. This article provides a compilation of information present in the literature, offering a detailed review, with the aim of presenting a general panorama of what is known about Anodontites trapesialis and its larval parasitism of fishes.O molusco bivalve, Anodontites trapesialis, tem sido indicado como fonte alternativa para a aqüicultura, por ser considerado um alimento de bom valor nutricional com um conteúdo protéico próximo ao do pescado. Suas conchas podem ser utilizadas como fertilizantes calcáreos e ser agregadas a alimentos de animais domésticos e o nácar pode ser utilizado para fabricar botões e artesanatos. No entanto, as larvas de A. trapesialis, que são do tipo lasidium, são parasitas obrigatórias de peixes de água doce e a introdução desse bivalve em tanques de piscicultura tem causado transtornos e prejuízos aos produtores. Nada se conhece, porém, sobre o seu desenvolvimento nesses ambientes. Por outro lado, ressalta-se que A. trapesialis consta da lista brasileira de espécies ameaçadas de extinção. No presente artigo são compiladas as informações presentes na literatura, em uma revisão detalhada, com o objetivo de apresentar o panorama geral do

Modiolarca lateralis (Pteryomorphia: Mytilidae: bivalve associated to six species of ascidians from Bocas del Toro, Panama

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Juan I Cañete

2013-11-01

Full Text Available We describe the presence of the bivalve Modiolarca lateralis (Say, 1822 in six tropical ascidians Ascidia curvata, A. sydneiensis, A. panamensis, A. interrupta, Herdmania pallida and Polycarpa spongiabilis collected at depths of 1-3 m on coral reefs, mangrove roots and dock supports in Almirante Bay, Bocas del Toro, Panama (9°18'N, 82°13'W during June-July 2011. Bivalve prevalence varied between 9-30% across species, but was mainly associated with A. panamensis, P. spongiabilis and A. interrupta. Prevalence seems to be influenced by tunic thickness rather than by the ascidian size. Bivalves varied in size (0.6-11 mm shell length, with the smallest individual found in A. sydneiensis. There were only one or two bivalves per ascidians, although a maximum of 18 was found in one A. panamensis. M. lateralis seems to behave similarly to its temperate counterparts: it has a variety of hosts, occurs mainly in the anterior region of the ascidians, and has a variable abundance per host.

Shell growth and environmental control of methanophyllic Thyasirid bivalves from Svalbard cold seeps

Science.gov (United States)

Carroll, Michael; Åström, Emmelie; Ambrose, William; Locke, William; Oliver, Graham; Hong, Wei-Li; Carroll, JoLynn

2016-04-01

The analysis of molluscan shell material (sclerochronology) can provide information about an organism's age, growth history, and environmental conditions during its lifetime. Bivalve molluscs are common members of hydrothermal vents and methane cold seeps communities where, supported by chemosynthetic symbionts, they can reach high density and biomass. But little is known about methane-associated bivalve populations inhabiting high-Arctic cold seeps, and sclerochronological analysis of methane-influenced bivalves is rare. We measured growth rates and elemental and isotopic shell signatures in a newly discovered species of bivalve (Thyasiridae) from cold seeps at 350-390m depth southwest of Svalbard. First discovered in 2014, recently described shells of Thyasira capitanea sp.nov. were found at 2 independent seep systems in Storfjordrenna. Mean shell carbon isotopic ratios from inorganic δ13C (mean = -4.8‰) and organic δ13C (mean = -26.9‰) fractions clearly indicate a methane influenced habitat and food source for these organisms. Shell mineral ratios (Li/Ca, Mg/Ca, Mn/Ca, Fe/Ca, Sr/Ca, Ba/Ca, Pb/Ca) sampled along the axis of growth with laser-ablated ICP-MS exhibit variability through time and between sites, suggesting that concentrations of these elements that may be affected by methane emissions. The mineralogical data also elucidates the internal pattern of shell deposition and growth checks, and combined with the isotopic and growth rate data, enables us to interpret the temporal history of methane release from these locations.

Influence of food on the assimilation of selected metals in tropical bivalves from the New Caledonia lagoon: Qualitative and quantitative aspects

International Nuclear Information System (INIS)

Hedouin, Laetitia; Metian, Marc; Lacoue-Labarthe, Thomas; Fichez, Renaud; Teyssie, Jean-Louis; Bustamante, Paco; Warnau, Michel

2010-01-01

The present study aimed at examining the influence of food quality and quantity on the assimilation efficiency (AE) of metals in two abundant bivalves in the New Caledonia lagoon, the oyster Isognomon isognomon and the clam Gafrarium tumidum. Bivalves were exposed via their food to the radiotracers of three metals of concern in New Caledonia ( 54 Mn, 57 Co and 65 Zn) under different feeding conditions (phytoplankton species, cell density, and cell-associated metal concentration). When bivalves were fed Heterocapsa triquetra, Emiliania huxleyi and Isochrysis galbana, AE of Mn, Co and Zn was strongly influenced by the phytoplankton species and by the metal considered. In contrast, when fed one given phytoplankton species previously exposed to different concentrations of Co, phytoplankton-associated Co load had no influence on the AE and on the retention time of the metal in both bivalves. Metals ingested with I. galbana displayed generally the highest AE in both bivalve species, except for Mn in clams for which the highest AE was observed for H. triquetra. Influence of food quantity was investigated by exposing bivalves to different cell densities of I. galbana (5 x 10 3 , 10 4 or 5 x 10 4 cell ml -1 ). As for food quality, food quantity was found to influence AE of Mn, Co and Zn, the highest AE being observed when bivalves were fed the lowest cell density. Overall, results indicate that the two bivalve species are able to adjust their feeding strategies according to the food conditions prevailing in their environment.

Intrinsic hierarchical structural imperfections in a natural ceramic of bivalve shell with distinctly graded properties.

Science.gov (United States)

Jiao, Da; Liu, Zengqian; Zhang, Zhenjun; Zhang, Zhefeng

2015-07-22

Despite the extensive investigation on the structure of natural biological materials, insufficient attention has been paid to the structural imperfections by which the mechanical properties of synthetic materials are dominated. In this study, the structure of bivalve Saxidomus purpuratus shell has been systematically characterized quantitatively on multiple length scales from millimeter to sub-nanometer. It is revealed that hierarchical imperfections are intrinsically involved in the crossed-lamellar structure of the shell despite its periodically packed platelets. In particular, various favorable characters which are always pursued in synthetic materials, e.g. nanotwins and low-angle misorientations, have been incorporated herein. The possible contributions of these imperfections to mechanical properties are further discussed. It is suggested that the imperfections may serve as structural adaptations, rather than detrimental defects in the real sense, to help improve the mechanical properties of natural biological materials. This study may aid in understanding the optimizing strategies of structure and properties designed by nature, and accordingly, provide inspiration for the design of synthetic materials.

Congener-specific distribution and bioaccumulation of short-chain chlorinated paraffins in sediments and bivalves of the Bohai Sea, China.

Science.gov (United States)

Ma, Xindong; Chen, Chen; Zhang, Haijun; Gao, Yuan; Wang, Zhen; Yao, Ziwei; Chen, Jiping; Chen, Jingwen

2014-02-15

Short-chain chlorinated paraffins (SCCPs) are a new type of persistent organic pollutants that are of great environmental concern because of their wide distribution. In this study, surface sediments and bivalve samples were collected from the coastal area of the Bohai Sea in China. Total SCCP (ΣSCCP) concentrations in surface sediments and bivalves ranged from 97.4 ng g(-1) dry weight (dw) to 1756.7 ng g(-1) dw and 476.4-3269.5 ng g(-1) dw, respectively. C10-CPs and C11-CPs were the predominant homologue groups in all sediments and bivalves. Specific congener composition analysis and correspondence analysis indicated that the local SCCP source mainly came from CP-42 and CP-52 products, and riverine input had an important function. The biota-sediment accumulation factors of ΣSCCPs for bivalves ranged from 1.08 to 1.61, and a significant correlation indicated that the SCCP congener with higher chlorination degree was more likely to be accumulated in bivalves. Copyright © 2014. Published by Elsevier Ltd.

EU Regulatory Risk Management of Marine Biotoxins in the Marine Bivalve Mollusc Food-Chain.

Science.gov (United States)

O'Mahony, Micheál

2018-03-10

Food safety risk assessment in the European Union (EU) recognises consumer illness that arises from marine biotoxins as a risk associated with bivalve mollusc consumption. EU food regulations contain various general food safety obligations, which should contribute significantly to managing this risk. EU food regulations additionally impose various specific obligations on both Food Business Operators and Competent Authorities in order to manage the marine biotoxin food safety risk in the bivalve mollusc food-chain. These have a particular focus on the pre-harvest component of the food-chain. A central component of these specific systems is the requirement for ongoing monitoring of phytoplankton and biotoxin concentrations in water and molluscs, respectively. This monitoring explicitly brings a potential outcome of closing production areas delineated by classification to prohibit the harvest of bivalve molluscs as food from those areas when acceptable biotoxin concentrations are exceeded. This review considers the utility of these systems, at conceptual and practical levels, and explores their contribution to an effective regulatory risk management approach.

SHRIMP (CRANGON-CRANGON L) BROWSING UPON SIPHON TIPS INHIBITS FEEDING AND GROWTH IN THE BIVALVE MACOMA-BALTHICA (L)

NARCIS (Netherlands)

KAMERMANS, P; HUITEMA, HJ

1994-01-01

The influence of siphon browsing on the feeding behaviour and growth of Macoma balthica, a deposit-feeding bivalve, was studied in three manipulative experiments. Browsing was simulated by removing part of the inhalant siphon with scissors, or studied by exposing the bivalves to shrimps (Crangon

Immunomodulation by different types of N-oxides in the hemocytes of the marine bivalve Mytilus galloprovincialis.

Directory of Open Access Journals (Sweden)

Caterina Ciacci

Full Text Available The potential toxicity of engineered nanoparticles (NPs for humans and the environment represents an emerging issue. Since the aquatic environment represents the ultimate sink for NP deposition, the development of suitable assays is needed to evaluate the potential impact of NPs on aquatic biota. The immune system is a sensitive target for NPs, and conservation of innate immunity represents an useful basis for studying common biological responses to NPs. Suspension-feeding invertebrates, such as bivalves, are particularly at risk to NP exposure, since they have extremely developed systems for uptake of nano and microscale particles integral to intracellular digestion and cellular immunity. Evaluation of the effects of NPs on functional parameters of bivalve immunocytes, the hemocytes, may help understanding the major toxic mechanisms and modes of actions that could be relevant for different NP types in aquatic organisms.In this work, a battery of assays was applied to the hemocytes of the marine bivalve Mytilus galloprovincialis to compare the in vitro effects of different n-oxides (n-TiO(2, n-SiO(2, n-ZnO, n-CeO(2 chosen on the basis of their commercial and environmental relevance. Physico-chemical characterization of both primary particles and NP suspensions in artificial sea water-ASW was performed. Hemocyte lysosomal and mitochondrial parameters, oxyradical and nitric oxide production, phagocytic activity, as well as NP uptake, were evaluated. The results show that different n-oxides rapidly elicited differential responses hemocytes in relation to their chemical properties, concentration, behavior in sea water, and interactions with subcellular compartments. These represent the most extensive data so far available on the effects of NPs in the cells of aquatic organisms. The results indicate that Mytilus hemocytes can be utilized as a suitable model for screening the potential effects of NPs in the cells of aquatic invertebrates, and may

Microhabitat and biology of Sphaerium striatinum in a central New York stream

Science.gov (United States)

Dittman, Dawn E.; Johnson, James H.; Nack, Christopher C.

2018-01-01

In many lotic systems, drastic declines in freshwater bivalve populations, including fingernail clams (Sphaeriidae), have created concerns about biodiversity and future ecosystem services. We examined the local occurrence of the historically common fingernail clam, Sphaerium striatinum, in a central New York stream. We sampled the density of sphaeriids and measured the associated habitat variables (substrate, depth, water flow) to test within-stream multivariate benthic microhabitat association. Size distribution, density, and diel feeding periodicity were measured as focal aspects of fingernail clam biology and ecology. S. striatinum tended to be found in microhabitats that had harder substrates and faster flow. The Labrador Creek fingernail clam local population had positive indicators (size distribution, density). There was significant diel periodicity in feeding behavior. The clams fed most actively during the 0400–0800 h periods. This kind of behavioral periodicity can indicate a significant ecological interaction between predators and bivalve prey. Increased understanding of the behavioral ecology of small native freshwater bivalves in an unimpacted headwater stream is a fundamental building block for development of overall ecological conservation goals for freshwater bivalves and their lotic habitats.

Lower Oligocene bivalves of Ramanian Stage from Kachchh, Gujarat, India

Science.gov (United States)

Kachhara, R. P.; Jodhawat, R. L.; Devi, K. Bigyapati

2012-04-01

Marine Oligocene sequences in India outcrop only in western part of Kachchh. Earlier researchers have recognized the Oligocene strata under the Nari Series (Nagappa 1959; Chatterji and Mathur 1966). The Nari Series has a type area in Pakistan. It has two subdivisions - the Lower Nari (Lower Oligocene) and the Upper Nari (Upper Oligocene). It seems that there is no valid proof about the age of the Lower Nari due to lack of proper fauna (Eames 1975), and according to Pascoe (1962), the Upper Nari slightly transgress into Aquitanian (Lower Miocene), therefore, one has to be very cautious. Biswas and Raju (1971) reclassified the Oligocene strata of Kachchh and lithostratigraphically clubbed them as the Maniyara Fort Formation with type section along the Bermoti stream. This Formation has four members. The lower three members correspond to the Ramanian Stage (Lower Oligocene, Biswas 1971, 1973) while the uppermost to the Waiorian Stage (Upper Oligocene, Biswas 1965, 1971, 1973). The Ramanian Stage is characterized by large forams especially Nummulites fichteli, Nummulites fichteli intermedius, Lepidocyclina ( Eulepidina) dialata and Operculina sp. Several ostracods are also known to occur. Megafauna include bivalves, gastropods, echinoids, corals, mammals and reptiles. Concerning bivalves earlier researchers have recorded a few taxa namely Trisidos semitorta (Lamarck), Cubitostrea angulata (J de C Sowerby), Pecten ( Amussiopecten) labadyei d'Archiac and Haime, Periglypta puerpera (Linne') var. aglaurae Brongniart, Ostrea fraasi Mayer Eymer and listed Pecten laevicostatus J de C Sowerby, Callista pseudoumbonella Vredenburg and Clementia papyracea (Gray) from Kachchh as against overall 42 forms from the Nari Series as a whole (Vredenburg 1928). This tempted us to make an attempt to collect bivalve fauna systematically which are occurring prolifically in the Ramanian Stage. In the present work, for this purpose, sections are worked out around Lakhpat (23°50'N; 68°47'E

Seasonal variability in somatic and reproductive investment of the bivalve

NARCIS (Netherlands)

Santos, S.; Cardoso, J.F.M.F.; Carvalho, C.; Luttikhuizen, P.C.; van der Veer, H.W.

2011-01-01

Monthly investment in soma and gonads in the bivalve Scrobicularia plana is described for three populations along its distributional range: Minho estuary, Portugal; Westerschelde estuary, The Netherlands and Buvika estuary, Norway. Seasonal cycles in body mass (BMI), somatic mass (SMI) and

Organisms associated with the sandy-beach bivalve Donax serra ...

African Journals Online (AJOL)

57: 134-136. BROWN, AC. & WEBB, S.c. 1994. Organisms associated \\.,.,ith burrowing whelks of the genus Bullia. S Afr. 1. Zool. 29: 144-151. BROWN, A.C., STENTON-DOZEY, J.~.E. & TRUEMAN, E.R.. 1989. Sandy-beach bivalves and gastropods; a comparison between Donax serra and Ruilia digitalis. Adv. mar. Bioi. 25:.

Otimização do processo de depuração de moluscos bivalves

OpenAIRE

Correia, Maria Helena Oliveira Casimiro

2016-01-01

A contaminação microbiológica de moluscos bivalves constitui uma das principais preocupações inerentes à segurança alimentar desta importante fonte de receitas para a economia portuguesa. Os bivalves capturados ou produzidos em zonas estuarinas ou lagunares devem passar por um processo de depuração, para redução dos níveis de contaminação microbiológica, antes da sua comercialização. Este trabalho teve como principal objetivo o desenvolvimento de sistemas modulares de dep...

Phenology of abundance of bivalve spat and of their epibenthic predators: limited evidence for mismatches after cold winters

NARCIS (Netherlands)

Dekker, R.; Beukema, J.J.

2014-01-01

Annual recruitment of bivalves in the Wadden Sea is usually more successful in summers after cold than after mild winters. The new generation (0-group) of the main predators (shrimps and shore crabs) of early benthic stages of bivalves appear later in spring on tidal flats after colder winters. If

Parasites of economically important bivalves from the southern coast of Bahia State, Brazil Parasitos de bivalves de interesse econômico no Litoral Sul do Estado da Bahia, Brasil

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Gabriela Calvi Zeidan

2012-12-01

Full Text Available This study investigated the parasites of three commercially important bivalve species (Crassostrea rhizophorae, Mytella guyanensis and Lucina pectinata from the southern coast of Bahia, Brazil. A total of 540 specimens were collected in August 2009 and February 2010, at three localities. The bivalve specimens were measured on their longest axis, opened, and macroscopically examined for the presence of parasites or signs of disease. They were then fixed in Davidson' solution and subjected to routine histological processing, with paraffin embedding and H&E staining; next, the specimens were examined under a light microscope. No parasites were observed associated with L. pectinata. Rickettsia-like organisms (RLOs, Sphenophrya sp. (Ciliophora, Nematopsis sp. (Apicomplexa, Urastoma sp. (Turbellaria and Bucephalus sp. (Digenea were observed in both C. rhizophorae and M. guyanensis, as well as Ancistrocoma sp. (Ciliophora and Tylocephalum sp. (Cestoda in the former. A high prevalence of Nematopsis sp. was seen, but caused no apparent damage to the host. Bucephalus sp. caused the destruction of tissues, with castration, but showed low prevalence. The other parasites occurred in low prevalence and intensity, without causing significant damage.Neste estudo foram investigados os parasitos de três espécies de bivalves de interesse econômico (Crassostrea rhizophorae, Mytella guyanensis e Lucina pectinata da Bahia. Foram analisados 540 exemplares, obtidos em duas coletas (agosto-2009 e fevereiro-2010, em três localidades. Os bivalves foram medidos quanto ao seu maior eixo, abertos e examinados macroscopicamente quanto à presença de parasitos ou sinais de enfermidades. Depois disso, foram fixados em solução de Davidson e processados por rotina de histologia, com inclusão em parafina e coloração com H&E. O material foi examinado ao microscópio de luz. Nenhum parasito esteve associado a L. pectinata. Bactérias do tipo RLOs (organismos assemelhados a

EU Regulatory Risk Management of Marine Biotoxins in the Marine Bivalve Mollusc Food-Chain

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Micheál O’Mahony

2018-03-01

Full Text Available Food safety risk assessment in the European Union (EU recognises consumer illness that arises from marine biotoxins as a risk associated with bivalve mollusc consumption. EU food regulations contain various general food safety obligations, which should contribute significantly to managing this risk. EU food regulations additionally impose various specific obligations on both Food Business Operators and Competent Authorities in order to manage the marine biotoxin food safety risk in the bivalve mollusc food-chain. These have a particular focus on the pre-harvest component of the food-chain. A central component of these specific systems is the requirement for ongoing monitoring of phytoplankton and biotoxin concentrations in water and molluscs, respectively. This monitoring explicitly brings a potential outcome of closing production areas delineated by classification to prohibit the harvest of bivalve molluscs as food from those areas when acceptable biotoxin concentrations are exceeded. This review considers the utility of these systems, at conceptual and practical levels, and explores their contribution to an effective regulatory risk management approach.

Field clearance of an intertidal bivalve bed: relative significance of the co-occurring blue mussel Mytilus edulis and Pacific oyster Crassostrea gigas

DEFF Research Database (Denmark)

Vismann, Bent; Holm, Mark Wejlemann; Davids, Jens

2016-01-01

was estimated by combining field measurements of clearance rates and modelling of the bivalve bed (topography, biomass distribution, temporal and spatial water coverage and depth). The average density of C. gigas and M. edulis was 35 ± 36 and 1001 ± 685 ind. m−2, respectively. The water volume cleared during...... a tidal cycle was estimated at 45 838 m3, of which C. gigas and M. edulis contributed 9169 and 36 669 m3, respectively. Therefore, M. edulis contributed 4 times as much as C. gigas to the bivalve bed’s clearance, and the 2 bivalves were estimated to clear the water volume 1.9 times during each tidal cycle....... However, the estimated water column cleared during low tide is overestimated due to phytoplankton depletion. Hence, it is concluded that the bivalve bed clears the water close to 1 time each tidal cycle. This, together with a low dry weight of soft parts, indicates that the bivalve bed, in general...

In situ method for measurements of community clearance rate on shallow water bivalve populations

DEFF Research Database (Denmark)

Hansen, Benni W.; Dolmer, Per; Vismann, Bent

2011-01-01

An open-top chamber was designed for measuring ambient community clearance rate on undisturbed bivalve populations in the field. The chamber was pressed 5-10 cm down in the sediment on the mussel bed. It holds approximately 30-40 cm water column equal to a volume of 43-77 L. It was provided...... with an air lift connected to a SCUBA diver pressure tank generating a continuous and gentle water circulation. This ensures a complete mixture of suspended particles, and thereby, a maximum filtration by the bivalves. An in situ fluorometer was mounted to record plant pigment reduction due to mussel...

Deciphering the link between doubly uniparental inheritance of mtDNA and sex determination in bivalves: Clues from comparative transcriptomics

Science.gov (United States)

Capt, Charlotte; Renaut, Sébastien; Ghiselli, Fabrizio; Milani, Liliana; Johnson, Nathan A.; Sietman, Bernard E.; Stewart, Donald; Breton, Sophie

2018-01-01

Bivalves exhibit an astonishing diversity of sexual systems and sex-determining mechanisms. They can be gonochoric, hermaphroditic or androgenetic, with both genetic and environmental factors known to determine or influence sex. One unique sex-determining system involving the mitochondrial genome has also been hypothesized to exist in bivalves with doubly uniparental inheritance (DUI) of mtDNA. However, the link between DUI and sex determination remains obscure. In this study, we performed a comparative gonad transcriptomics analysis for two DUI-possessing freshwater mussel species to better understand the mechanisms underlying sex determination and DUI in these bivalves. We used a BLAST reciprocal analysis to identify orthologs between Venustaconcha ellipsiformis and Utterbackia peninsularis and compared our results with previously published sex-specific bivalve transcriptomes to identify conserved sex-determining genes. We also compared our data with other DUI species to identify candidate genes possibly involved in the regulation of DUI. A total of ∼12,000 orthologous relationships were found, with 2,583 genes differentially expressed in both species. Among these genes, key sex-determining factors previously reported in vertebrates and in bivalves (e.g., Sry, Dmrt1, Foxl2) were identified, suggesting that some steps of the sex-determination pathway may be deeply conserved in metazoans. Our results also support the hypothesis that a modified ubiquitination mechanism could be responsible for the retention of the paternal mtDNA in male bivalves, and revealed that DNA methylation could also be involved in the regulation of DUI. Globally, our results suggest that sets of genes associated with sex determination and DUI are similar in distantly-related DUI species.

Thyasirid bivalves from Cretaceous and Paleogene cold seeps

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Krzysztof Hryniewicz

2017-11-01

Full Text Available We present a systematic study of thyasirid bivalves from Cretaceous to Oligocene seep carbonates worldwide. Eleven species of thyasirid bivalves are identified belonging to three genera: Conchocele, Maorithyas, and Thyasira. Two species are new: Maorithyas humptulipsensis sp. nov. from middle Eocene seep carbonates in the Humptulips Formation, Washington State, USA, and Conchocele kiritachiensis sp. nov. from the late Eocene seep deposit at Kiritachi, Hokkaido, Japan. Two new combinations are provided: Conchocele townsendi (White, 1890 from Maastrichtian strata of the James Ross Basin, Antarctica, and Maorithyas folgeri (Wagner and Schilling, 1923 from Oligocene rocks from California, USA. Three species are left in open nomenclature. We show that thyasirids have Mesozoic origins and appear at seeps before appearing in “normal” marine environments. These data are interpreted as a record of seep origination of thyasirids, and their subsequent dispersal to non-seep environments. We discuss the age of origination of thyasirids in the context of the origin of the modern deep sea fauna and conclude that thyasirids could have deep sea origins. This hypothesis is supported by the observed lack of influence of the Cretaceous and Paleogene Oceanic Anoxic Events on the main evolutionary lineages of the thyasirids, as seen in several other members of the deep sea fauna.

Bivalve grazing, nutrient cycling and phytoplankton dynamics in an estuarine ecosystem

NARCIS (Netherlands)

Prins, T.C.

1996-01-01

This thesis has considered the impact of the suspension feeding bivalve Mytilusedulis on nutrient cycling and phytoplankton in an estuarine ecosystem. The research was started within the framework of an extensive research project with the

An integrated ecosystem approach for assessing the potential role of cultivated bivalve shells as part of the carbon trading system

NARCIS (Netherlands)

Filgueira, R.; Byron, C.J.; Comeau, L.A.; Jansen, H.M.; Smaal, A.C.

2015-01-01

The role of bivalve mariculture in the CO2 cycle has been commonly evaluated as the balance between respiration, shell calcium carbonate sequestration and CO2 release during biogenic calcification. However, this approach neglects the ecosystem implications of cultivating bivalves at high densities,

Labelling and Marketing of Bivalve and Gastropod Molluscs Retailed in Sardinia, Italy Between 2009 and 2013.

Science.gov (United States)

Meloni, Domenico

2015-05-28

The aim of the present survey was to investigate the correct enforcement of the Community rules on the labelling and marketing of bivalve and gastropod molluscs retailed in Sardinia, Italy between 2009 and 2013. A total of 1500 packages and labels for live bivalve and gastropod molluscs were considered. A total of 375 labels (25%) presented non-compliance concerning the wrong trade name and additional wrong or missing information. The highest percentage of anomalous labels has been detected in small-scale retail shops (35%) and open-air markets (25%) compared with the big retailing chains (20%). The 5% of packages were not in compliance with the European Community rules on packaging of bivalve and gastropod molluscs. The high percentage of non-compliance with the European regulations on labelling results is a strong limitation for the consumers and highlights the need to improve the control system about labelling of seafood products.

Marine Bacteria with antimicrobials capacity isolated from cultures of bivalve mollusks

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Fabiola Pellon

2014-06-01

Full Text Available Microorganisms have commonly been studied as producers of antibacterial substances; yet they are also considered producers of antifungic, antiviral, antiparasitic, citotoxics and inhibitory of other forms of cellular growth substances. This paper describes the isolation, inhibitory potential and phenotipic characterization of native bacterial strains associated to bivalve mollusks such as Argopecten purpuratus “concha de abanico” and Crassostrea gigas “ostra” in cultivation systems. From 345 marine strains collected, 20 strains were recovered that had the ability of inhibiting a wide spectrum of fish, mollusks and shellfish pathogenic bacteria; being the most sensitive pathogens Aeromonas sobria P-281, Aeromonas hydrophila ATCC 7966, Vibrio vulnificus ATCC 27562 and Vibrio parahaemolyticus ATCC 17803. The phenotipic characterization of this strains with inhibitory capacity allowed the identification of the following genera: Vibrio (40%, Aeromonas (15%, Flavobacterium (10%, Pseudomonas (5%, Moraxella (5%, Flexibacter (5%. A 20% could not be identified. The results suggest that the isolated bacteria could be used as probiotics agents for the biological control of pathogens from marine organisms of interest in mariculture.

Growth rates and geochemical proxies in Late Campanian bivalves - New insights from micro-X-ray Fluorescence mapping and numerical growth modelling

Science.gov (United States)

de Winter, Niels; Goderis, Steven; van Malderen, Stijn; Vanhaecke, Frank; Claeys, Philippe

2017-04-01

Understanding the Late Cretaceous greenhouse climate is of vital importance for understanding present and future climate change. While a lot of good work has been done to reconstruct climate in this interesting period, most paleoclimatic studies have focused on long-term climate change[1]. Alternatively, multi-proxy records from marine bivalves provide us with a unique opportunity to study past climate on a seasonal scale. However, previous fossil bivalve studies have reported ambiguous results with regard to the interpretation of trace element and stable isotope proxies in marine bivalve shells[2]. One major problem in the interpretation of such records is the bivalve's vital effect and the occurrence of disequilibrium fractionation during bivalve growth. Both these problems are linked to the annual growth cycle of marine bivalves, which introduces internal effects on the incorporation of isotopes and trace elements into the shell[3]. Understanding this growth cycle in extinct bivalves is therefore of great importance for the interpretation of seasonal proxy records in their shells. In this study, three different species of extinct Late Campanian bivalves (two rudist species and one oyster species) that were found in the same stratigraphic interval are studied. Micro-X-Ray Fluorescence line scanning and mapping of trace elements such as Mg, Sr, S and Zn, calibrated by LA-ICP-MS measurements, is combined with microdrilled stable carbon and oxygen isotope analysis on the well-preserved part of the shells. Data of this multi-proxy study is compared with results from a numerical growth model written in the open-source statistics package R[4] and based on annual growth increments observed in the shells and shell thickness. This growth model is used together with proxy data to reconstruct rates of trace element incorporation into the shell and to calculate the mass balance of stable oxygen and carbon isotopes. In order to achieve this goal, 2D mapping of bivalve shell

The potential accumulation of polycyclic aromatic hydrocarbons in phytoplankton and bivalves in Can Gio coastal wetland, Vietnam.

Science.gov (United States)

Thuy, Hoang Thi Thanh; Loan, Tu Thi Cam; Phuong, Trinh Hong

2018-05-12

Polycyclic aromatic hydrocarbons (PAHs) are one of the most important classes of anthropogenic persistent organic contaminants in the marine environment. This review discusses a whole range of findings that address various aspects of the bioaccumulation of PAHs in two common marine biota (phytoplankton and bivalves) globally and especially for Can Gio coastal wetland, Vietnam. The published information and collected data on the bioconcentration and accumulation mechanisms of PAHs as well as implications for Can Gio coastal wetland are compiled for phytoplankton and bivalves. PAHs are still released to Can Gio coastal environments from various sources and then transported to coastal environments through various physical processes; they may enter marine food chains and be highly accumulated in phytoplankton and bivalves. Thus, PAHs' bioaccumulation should be considered as one important criterion to assess the water's quality, directly linked to human health due to seafood consumption. Ecologically, Can Gio coastal wetland plays an important role to the South Vietnam key economic zone. However, it is also an area of potential PAHs inputs. With the abundant phytoplankton and bivalves in Can Gio coastal wetland, the PAHs bioaccumulation in these biota is inevitably detected. Thus, further study on the bioavailability of these contaminants is urgently needed in order to mitigate their negative effects and protect the ecosystems.

[Biological characteristics of calliphoridae and its application in forensic medicine].

Science.gov (United States)

Zhao, Boa; Wen, Charn; Qi, Li-Li; Wang, He; Wang, Ji

2013-12-01

Diptera Calliphoridae is the first major kind of flies that appears on the decomposed corpses. In forensic entomology, according to the living characteristics of Calliphoridae flies, we could accurately estimate postmortem interval (PMI) in a murder or unidentified case and could provide useful clues to solve the case. This paper introduces the characteristics of the biology and morphology of Diptera Calliphoridae, and reviews the combined application of forensic entomology, molecular biology, mathematical morphology and toxicology.

Wood-Boring Bivalves (Mollusca: Teredinidae, Pholadidae) of Pacific coast of Colombia

International Nuclear Information System (INIS)

Cantera K, Jaime R

2010-01-01

Twelve species of wood-boring bivalves, ten of the family Teredinidae and two of family Pholadidae were collected in mangroves at 6 locations of the Pacific coast of Colombia. This paper presents a brief escription of these species, including size, ecological notes and geographical distribution.

Labelling and marketing of bivalve and gastropod molluscs retailed in Sardinia, Italy between 2009 and 2013

Directory of Open Access Journals (Sweden)

Domenico Meloni

2015-06-01

Full Text Available The aim of the present survey was to investigate the correct enforcement of the Community rules on the labelling and marketing of bivalve and gastropod molluscs retailed in Sardinia, Italy between 2009 and 2013. A total of 1500 packages and labels for live bivalve and gastropod molluscs were considered. A total of 375 labels (25% presented non-compliance concerning the wrong trade name and additional wrong or missing information. The highest percentage of anomalous labels has been detected in small-scale retail shops (35% and open-air markets (25% compared with the big retailing chains (20%. The 5% of packages were not in compliance with the European Community rules on packaging of bivalve and gastropod molluscs. The high percentage of non-compliance with the European regulations on labelling results is a strong limitation for the consumers and highlights the need to improve the control system about labelling of seafood products.

Semi-automatic surface sediment sampling system - A prototype to be implemented in bivalve fishing surveys

Science.gov (United States)

Rufino, Marta M.; Baptista, Paulo; Pereira, Fábio; Gaspar, Miguel B.

2018-01-01

In the current work we propose a new method to sample surface sediment during bivalve fishing surveys. Fishing institutes all around the word carry out regular surveys with the aim of monitoring the stocks of commercial species. These surveys comprise often more than one hundred of sampling stations and cover large geographical areas. Although superficial sediment grain sizes are among the main drivers of benthic communities and provide crucial information for studies on coastal dynamics, overall there is a strong lack of this type of data, possibly, because traditional surface sediment sampling methods use grabs, that require considerable time and effort to be carried out on regular basis or on large areas. In face of these aspects, we developed an easy and un-expensive method to sample superficial sediments, during bivalve fisheries monitoring surveys, without increasing survey time or human resources. The method was successfully evaluated and validated during a typical bivalve survey carried out on the Northwest coast of Portugal, confirming that it had any interference with the survey objectives. Furthermore, the method was validated by collecting samples using a traditional Van Veen grabs (traditional method), which showed a similar grain size composition to the ones collected by the new method, on the same localities. We recommend that the procedure is implemented on regular bivalve fishing surveys, together with an image analysis system to analyse the collected samples. The new method will provide substantial quantity of data on surface sediment in coastal areas, using a non-expensive and efficient manner, with a high potential application in different fields of research.

Near infra-red spectroscopy quantitative modelling of bivalve protein, lipid and glycogen composition using single-species versus multi-species calibration and validation sets

Science.gov (United States)

Bartlett, Jill K.; Maher, William A.; Purss, Matthew B. J.

2018-03-01

Near infrared spectroscopy (NIRS) quantitative modelling was used to measure the protein, lipid and glycogen composition of five marine bivalve species (Saccostrea glomerata, Ostrea angasi, Crassostrea gigas, Mytilus galloprovincialis and Anadara trapezia) from multiple locations and seasons. Predictive models were produced for each component using individual species and aggregated sample populations for the three oyster species (S. glomerata, O. angasi and C. gigas) and for all five bivalve species. Whole animal tissues were freeze dried, ground to > 20 μm and scanned by NIRS. Protein, lipid and glycogen composition were determined by traditional chemical analyses and calibration models developed to allow rapid NIRS-measurement of these components in the five bivalve species. Calibration modelling was performed using wavelet selection, genetic algorithms and partial least squares analysis. Model quality was assessed using RPIQ and RMESP. For protein composition, single species model results had RPIQ values between 2.4 and 3.5 and RMSEP between 8.6 and 18%, the three oyster model had an RPIQ of 2.6 and an RMSEP of 10.8% and the five bivalve species had an RPIQ of 3.6 and RMSEP of 8.7% respectively. For lipid composition, single species models achieved RPIQ values between 2.9 and 5.3 with RMSEP between 9.1 and 11.2%, the oyster model had an RPIQ of 3.6 and RMSEP of 6.8 and the five bivalve model had an RPIQ of 5.2 and RMSEP of 6.8% respectively. For glycogen composition, the single species models had RPIQs between 3.8 and 18.9 with RMSEP between 3.5 and 9.2%, the oyster model had an RPIQ of 5.5 and RMSEP of 7.1% and the five bivalve model had an RPIQ of 4 and RMSEP of 7.6% respectively. Comparison between individual species models and aggregated models for three oyster species and five bivalve species for each component indicate that aggregating data from like species produces high quality models with robust and reliable quantitative application. The benefit of

Marine Bivalve Cellular Responses to Beta Blocker Exposures ...

Science.gov (United States)

β blockers are prescription drugs used for medical treatment of hypertension and arrhythmias. They prevent binding of agonists such as catecholamines to β adrenoceptors. In the absence of agonist induced activation of the receptor, adenylate cyclase is not activated which in turn limits cAMP production and protein kinase A activation, preventing increases in blood pressure and arrhythmias. After being taken therapeutically, commonly prescribed β blockers may make their way to coastal habitats via discharge from waste water treatment plants (WWTP) posing a potential risk to aquatic organisms. The aim of our research is to evaluate cellular responses of three commercially important marine bivalves - Eastern oysters, blue mussels and hard clams - upon exposure to two β blocker drugs, propranolol and metoprolol, and to find molecular initiating events (MIEs) indicative of the exposure. Bivalves were obtained from Narragansett Bay (Rhode Island, USA) and acclimated in the laboratory. Following acclimation, gills and hepatopancreas (HP) tissues were harvested and separately exposed to 0, 1, 10, 100 and 1000 ng/l of each drug. Tissues were bathed in 30 parts per thousand (ppt) filtered seawater, antibiotic mix, Leibovitz nutrient media, and the test drug. Exposures were conducted for 24 hours and samples were saved for cellular biomarker assays. A lysosomal destabilization assay, which is a marker of membrane damage, was also performed at the end of each exposure.

The Widespread Prevalence and Functional Significance of Silk-Like Structural Proteins in Metazoan Biological Materials.

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Carmel McDougall

Full Text Available In nature, numerous mechanisms have evolved by which organisms fabricate biological structures with an impressive array of physical characteristics. Some examples of metazoan biological materials include the highly elastic byssal threads by which bivalves attach themselves to rocks, biomineralized structures that form the skeletons of various animals, and spider silks that are renowned for their exceptional strength and elasticity. The remarkable properties of silks, which are perhaps the best studied biological materials, are the result of the highly repetitive, modular, and biased amino acid composition of the proteins that compose them. Interestingly, similar levels of modularity/repetitiveness and similar bias in amino acid compositions have been reported in proteins that are components of structural materials in other organisms, however the exact nature and extent of this similarity, and its functional and evolutionary relevance, is unknown. Here, we investigate this similarity and use sequence features common to silks and other known structural proteins to develop a bioinformatics-based method to identify similar proteins from large-scale transcriptome and whole-genome datasets. We show that a large number of proteins identified using this method have roles in biological material formation throughout the animal kingdom. Despite the similarity in sequence characteristics, most of the silk-like structural proteins (SLSPs identified in this study appear to have evolved independently and are restricted to a particular animal lineage. Although the exact function of many of these SLSPs is unknown, the apparent independent evolution of proteins with similar sequence characteristics in divergent lineages suggests that these features are important for the assembly of biological materials. The identification of these characteristics enable the generation of testable hypotheses regarding the mechanisms by which these proteins assemble and direct the

Biological and technological characteristics of Georgian wine and table grapes

Directory of Open Access Journals (Sweden)

Ujmajuridze Levan

2015-01-01

Description of grapevine varieties implemented through the descriptors for grapevine (IPGRI OIV. Botanical, biological-technological, qualitative and quantitative marks are characterized and evaluated. Investigation conducted during the biologic development phases were studied for chemical and eno-carpological characteristics.

Distribution of organotin compounds in the bivalves of the Aegean Sea, Greece

NARCIS (Netherlands)

Chandrinou, S.; Pappas, K.; Nikolaou, A.; Stasinakis, A.S.; Wegener, J.W.M.; Alexandropoulos, Th.; Thomaidis, N.S.

2007-01-01

Five bivalve species - Mytilus galloprovinciallis (Mediterranean mussels), Venus gallina (stripped venus), Modiola barbatus L. (bearded horse mussels), Pecten jacobeus (scallops) and Callista chione (hard clams) - were collected from seven areas in Aegean Sea, Greece, between August 2001 and January

Differing responses of the estuarine bivalve Limecola balthica to lowered water pH caused by potential CO2 leaks from a sub-seabed storage site in the Baltic Sea: An experimental study.

Science.gov (United States)

Sokołowski, Adam; Brulińska, Dominika; Mirny, Zuzanna; Burska, Dorota; Pryputniewicz-Flis, Dorota

2018-02-01

Sub-Seabed CCS is regarded as a key technology for the reduction of CO 2 emissions, but little is known about the mechanisms through which leakages from storage sites impact benthic species. In this study, the biological responses of the infaunal bivalve Limecola balthica to CO 2 -induced seawater acidification (pH7.7, 7.0, and 6.3) were quantified in 56-day mesocosm experiments. Increased water acidity caused changes in behavioral and physiological traits, but even the most acidic conditions did not prove to be fatal. In response to hypercapnia, the bivalves approached the sediment surface and increased respiration rates. Lower seawater pH reduced shell weight and growth, while it simultaneously increased soft tissue weight; this places L. balthica in a somewhat unique position among marine invertebrates. Copyright © 2017 Elsevier Ltd. All rights reserved.

Adaptive morphologies and guild structure in a high-diversity bivalve fauna from an early Campanian rocky shore, Ivö Klack (Sweden)

DEFF Research Database (Denmark)

Sørensen, Anne Mehlin; Surlyk, Finn; Jagt, John W. M.

2012-01-01

habitats. Study of the functional morphology of bivalve shells and comparison with extant relatives has resulted in a subdivision of the fauna into seven guilds and five habitats. The bivalve fauna represents a withinhabitat, time-averaged assemblage to which none of the species was introduced from...

Comparative in vitro study on free radical scavenging potential of selected bivalve species

Digital Repository Service at National Institute of Oceanography (India)

Shenai-Tirodkar, P.S.; Pawar, R.T.; Jagtap, T.G.

Bivalves such as, Crassostrea spp., Meretrix casta, Placuna placenta and Polymesoda erosa are largely consumed as edible seafood. It forms natural source of nutrition in coastal and worldwide population. Free radical scavenging activities...

Chemosynthetic bacteria found in bivalve species from mud volcanoes of the Gulf of Cadiz.

Science.gov (United States)

Rodrigues, Clara F; Webster, Gordon; Cunha, Marina R; Duperron, Sébastien; Weightman, Andrew J

2010-09-01

As in other cold seeps, the dominant bivalves in mud volcanoes (MV) from the Gulf of Cadiz are macrofauna belonging to the families Solemyidae (Acharax sp., Petrasma sp.), Lucinidae (Lucinoma sp.), Thyasiridae (Thyasira vulcolutre) and Mytilidae (Bathymodiolus mauritanicus). The delta(13)C values measured in solemyid, lucinid and thyasirid specimens support the hypothesis of thiotrophic nutrition, whereas isotopic signatures of B. mauritanicus suggest methanotrophic nutrition. The indication by stable isotope analysis that chemosynthetic bacteria make a substantial contribution to the nutrition of the bivalves led us to investigate their associated bacteria and their phylogenetic relationships based on comparative 16S rRNA gene sequence analysis. PCR-denaturing gradient gel electrophoresis analysis and cloning of bacterial 16S rRNA-encoding genes confirmed the presence of sulfide-oxidizing symbionts within gill tissues of many of the studied specimens. Phylogenetic analysis of bacterial 16S rRNA gene sequences demonstrated that most bacteria were related to known sulfide-oxidizing endosymbionts found in other deep-sea chemosynthetic environments, with the co-occurrence of methane-oxidizing symbionts in Bathymodiolus specimens. This study confirms the presence of several chemosynthetic bivalves in the Gulf of Cadiz and further highlights the importance of sulfide- and methane-oxidizing symbionts in the trophic ecology of macrobenthic communities in MV.

Distribution of DTHS3 satellite DNA across 12 bivalve species Eva ...

Indian Academy of Sciences (India)

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In this work, characterization of DTHS3 satellite DNA was further expanded within the Class. Bivalvia. Monomer variants of DTHS3 satDNA were compared in 12 bivalve species belonging to two different Subclasses, Heterodonta and Pteriomorphia. This satDNA, whose age is estimated to a minimum of 516 Ma, ...

Contamination in sediments, bivalves and sponges of McMurdo Sound, Antarctica

Energy Technology Data Exchange (ETDEWEB)

Negri, Andrew [Australian Institute of Marine Science, PMB 3, Townsville, Qld (Australia)]. E-mail: a.negri@aims.gov.au; Burns, Kathryn [Australian Institute of Marine Science, PMB 3, Townsville, Qld (Australia); Boyle, Steve [Australian Institute of Marine Science, PMB 3, Townsville, Qld (Australia); Brinkman, Diane [Australian Institute of Marine Science, PMB 3, Townsville, Qld (Australia); Webster, Nicole [Australian Institute of Marine Science, PMB 3, Townsville, Qld (Australia); Biological Sciences, University of Canterbury, Christchurch (New Zealand)

2006-10-15

This study examined the concentrations of total hydrocarbons (THC), polychlorinated biphenyls (PCB), polyaromatic hydrocarbons (PAH), and trace metals (Cu, Zn, Cd, Pb, Hg and As) in marine sediments off Scott Base (NZ) and compared them with sediments near the highly polluted McMurdo Station (US) as well as less impacted sites including Turtle Rock and Cape Evans. The Antarctic mollusc, Laternula elliptica and three common sponge species were also analysed for trace metals. The mean THC concentration in sediments from Scott Base was 3 fold higher than the pristine site, Turtle Rock, but 10 fold lower than samples from McMurdo Station. McMurdo Station sediments also contained the highest concentrations of PAHs, PCBs and the trace metals, Cu, Zn, Pb, Cd and Hg. Copper was significantly higher in bivalves from McMurdo Station than other sites. Trace metal concentrations in sponges were generally consistent within sites but no spatial patterns were apparent. - Analyses of Antarctic marine sediments, bivalves and sponges revealed strong PAH, PCB and trace metal gradients in McMurdo Sound.

Contamination in sediments, bivalves and sponges of McMurdo Sound, Antarctica

International Nuclear Information System (INIS)

Negri, Andrew; Burns, Kathryn; Boyle, Steve; Brinkman, Diane; Webster, Nicole

2006-01-01

This study examined the concentrations of total hydrocarbons (THC), polychlorinated biphenyls (PCB), polyaromatic hydrocarbons (PAH), and trace metals (Cu, Zn, Cd, Pb, Hg and As) in marine sediments off Scott Base (NZ) and compared them with sediments near the highly polluted McMurdo Station (US) as well as less impacted sites including Turtle Rock and Cape Evans. The Antarctic mollusc, Laternula elliptica and three common sponge species were also analysed for trace metals. The mean THC concentration in sediments from Scott Base was 3 fold higher than the pristine site, Turtle Rock, but 10 fold lower than samples from McMurdo Station. McMurdo Station sediments also contained the highest concentrations of PAHs, PCBs and the trace metals, Cu, Zn, Pb, Cd and Hg. Copper was significantly higher in bivalves from McMurdo Station than other sites. Trace metal concentrations in sponges were generally consistent within sites but no spatial patterns were apparent. - Analyses of Antarctic marine sediments, bivalves and sponges revealed strong PAH, PCB and trace metal gradients in McMurdo Sound

Availability of pearl producing marine bivalves in south-eastern coast of Bangladesh and culture potentialities

Directory of Open Access Journals (Sweden)

Md Ataur Rahman

2015-12-01

Full Text Available The present study was conducted during September 2014 to July 2015 to identify the pearl bearing bivalves in south-eastern coast of Bangladesh and culture potentialities of marine oyster in captivity based on field investigation. A total of 7 pearl bearing bivalve species were identified in the coast with a salinity of 18-34 ppt, pH 8.1-8.3 and water depth ranged 0.2-2.0 meter in their habitat. From the collected bivalves, most abundant oyster species windowpane oyster, Placuna placenta (Linnaeus, 1758 was reared in fiber glass tanks with seawater for a period of 6 months. During rearing highest survival rate of 88% was observed in T1 with sandy and gravel substratum and lowest survival rate of 78% was found in T2 with muddy substratum. Average temperature and salinity were varied between 24 °C-25 °C and 21-26 ppt respectively. From the reared oyster, highest 54 nos. small pearls in the month of April and lowest 7 pearls in December from a single P. placenta were obtained. The study proved that pearls can be obtained from the marine oysters in captivity in Bangladesh, and this offers large scale culture potentialities in our coast.

Comparative sensitivity of European native (Anodonta anatina) and exotic (Corbicula fluminea) bivalves to mercury

Science.gov (United States)

Oliveira, Patrícia; Lopes-Lima, Manuel; Machado, Jorge; Guilhermino, Lúcia

2015-12-01

Pollution is believed to be an important factor modulating the competition between exotic invasive bivalves and their native competitors. Thus, the objective of the present study was to compare the sensitivity of the European native Anodonta anatina and the exotic invasive species Corbicula fluminea to mercury, a ubiquitous environmental contaminant of high concern. In laboratory acute bioassays, adult organisms of both species were exposed independently to mercury for 96 h (31-500 μg/L). The criteria indicative of toxicity were mortality and biomarkers of oxidative stress and damage, neurotoxicity, and energy production changes. Mercury induced mortality in A. anatina (72 h-LC10 and 72 h-LC50 of 14.0 μg/L and 49.6 μg/L, respectively) but not in C. fluminea. The ability of C. fluminea to maintaining the shell closed for considerable periods of time when exposed to high concentrations of mercury and the effective activation (up to 63 μg/L) of mechanisms against the oxidative stress caused by mercury may have contributed to its relatively low sensitivity. In the range of concentrations tested, mercury had no significant effects on the other parameters analysed in C. fluminea. Overall, the findings of the present study, suggest that in real scenarios of competition between C. fluminea and A. anatina populations, the presence of mercury may modulate the process, acting in favour of the exotic species because it is less sensitive to this environmental contaminant than the native bivalve. The results of the present study highlight the need of further investigation on the effects of mercury on the competition between exotic invasive species and their native competitors, especially the effects potentially induced by long-term exposure to low concentrations of this metal, the mechanisms involved in the tolerance to mercury-induced stress, and the potential post-exposure recovery of both exotic invasive and native bivalves. This knowledge is most important for

Ecology of megabenthic bivalve communities from sandy beaches on the south coast of Portugal

Directory of Open Access Journals (Sweden)

Marta M. Rufino

2010-03-01

Full Text Available Ecological aspects of 75 megabenthic bivalve species found on the south coast of Portugal (from Vila Real to Sagres were studied based on the information provided by seasonal bivalve surveys from 2000 to 2007 (8600 hauls, simultaneously using a razor shell dredge and a clam dredge. Of the 75 species identified, 36 occurred less than 30 times, and thus were considered rare in the area. The remaining 39 bivalves were analysed according to their occurrence, bathymetric distribution, geographic preferences, seasonal preferences, burying-depth, beach exposure and river mouth proximity. All species belonging to the Pharidae and Solenidae families (razor shells and most Tellinidae were significantly more frequent in the razor shell dredge (indicating deeper burying in the sediment, whilst the families Cardiidae and Donacidae were significantly more frequent in the clam dredge (indicating that these species are probably closer to the sediment surface. As for the season, most bivalve species occurred similarly in both seasons (19 sp; 49%, but a large proportion were more abundant during the autumn surveys (17 sp., 44%, whereas only three species were commoner during the spring surveys. Most species belonging to the families Cardiidae and Mactridae were commoner in the autumn surveys. The spatial distribution differed between species and cluster analysis identified four communities with greater geographic affinity. Species belonging to the family Cardiidae were preferably found in the western part (WB and the eastern part (S of the study area, whereas the families Donacidae, Mactridae and Tellinidae occurred mainly in the central area (EB and the eastern (S coastal sectors. Overall, shallower species (modal depth at 3-6 m showed greater occurrences and abundances than the deeper ones, and the depth pattern observed did not change between seasons. Donacidae and Mactridae (except Mactra glauca were represented essentially by shallow species, whereas

Light indirectly mediates bivalve habitat modification and impacts on seagrass

DEFF Research Database (Denmark)

Castorani, Max C. N.; Glud, Ronnie; Hasler-Sheetal, Harald

2015-01-01

Environmental context may influence the sign, strength, andmechanisms of species interactions but few studies have experimentally tested the potential for abiotic conditions to mediate interactions through multiple cooccurring stress pathways. Abiotic conditionsmay mediate species interactions...... by directly or indirectly influencing the effects of habitat-modifying organisms that are capable of simultaneously ameliorating and exacerbating multiple stressors. Itwas hypothesized that light availability changes seagrassmetabolismand thereby indirectly regulates bivalve habitat modification...

Instructional Quality Features in Videotaped Biology Lessons: Content-Independent Description of Characteristics

Science.gov (United States)

Dorfner, Tobias; Förtsch, Christian; Boone, William; Neuhaus, Birgit J.

2017-09-01

A number of studies on single instructional quality features have been reported for mathematics and science instruction. For summarizing single instructional quality features, researchers have created a model of three basic dimensions (classroom management, supportive climate, and cognitive activation) of instructional quality mainly through observing mathematics instruction. Considering this model as valid for all subjects and as usable for describing instruction, we used it in this study which aimed to analyze characteristics of instructional quality in biology lessons of high-achieving and low-achieving classes, independently of content. Therefore, we used the data of three different previous video studies of biology instruction conducted in Germany. From each video study, we selected three high-achieving and three low-achieving classes (N = 18 teachers; 35 videos) for our multiple-case study, in which conspicuous characteristics of instructional quality features were qualitatively identified and qualitatively analyzed. The amount of these characteristics was counted in a quantitative way in all the videos. The characteristics we found could be categorized using the model of three basic dimensions of instructional quality despite some subject-specific differences for biology instruction. Our results revealed that many more characteristics were observable in high-achieving classes than in low-achieving classes. Thus, we believe that this model could be used to describe biology instruction independently of the content. We also make the claims about the qualities for biology instruction—working with concentration in a content-structured environment, getting challenged in higher order thinking, and getting praised for performance—that could have positive influence on students' achievement.

Study on the bioaccumulation of Polonium-210 on bivalve indicator organisms of Tamilnadu and Pondicherry coast (East Coast of India)

International Nuclear Information System (INIS)

Syed Mohamed, H.E.; Sadiq Bukhari, A.; Meeramaideen, M.; Masilamani, V.; Shamsudin, Mohamed; Shahul Hameed, P.

2012-01-01

210 Po is a major contributor (90%) of the natural radiation dose from alpha-emitting radionuclides, received by most marine organisms. Among marine organisms, benthic fauna are superior to many other biological groups, since they could be monitored due to their sedentary habits and then must either adapt to environmental stress or perish. They also reflect the water conditions not only at the time of sampling but also for some past time as well. The affinity of 210 Po for protein enables it to pass through the food chain, and increased body burdens of 210 Po have been found where diets include protein-rich meat and seafood. The present study was launched to evaluate the rate of accumulation of 210 Po in the benthic bivalve molluscs such as Perna indica, P.viridis, Meretrix casta, Cardium coronatum, Gafrarium tumidum, Paphia textrix, Vellorita cyprinodea and Pinctada sp., of Tamilnadu and Pondicherry coast. Water samples, sediments and bivalves were collected from Gulf of Mannar (6 sampling stations), Palk Strait (8 sampling stations) of Tamilnadu and Pondicherry (6 sampling stations). 210 Po determination as made was as per standard protocols. The results showed that 210 Po concentration in coastal waters of Gulf of Mannar, Palk Strait and Pondicherry ranged 0.5 - 2.83 mBq/l (mean 1.33 mBq/I), 2.14 - 32.14 mBq/l (mean 15.3 mBq/l) and 1.36 - 2.0 mBq/1 (mean 1.59 mBq/1) respectively. The sediments maintained higher level of 210 Po (mean value of 3.62 Bq/kg in Gulf of Mannar, 107.9 Bq/kg in Palk Strait and 3.0 Bq/kg in Pondicherry) than water. The 210 Po rich sediment therefore serves as a vital link in the transfer of Polonium from water to the marine organisms. The concentration of 210 Po in eight species of bivalves collected from the study area, recorded a maximum level ranging from 65.2 to 2668.9 Bq/kg in soft tissues and from 1.19 to 15.3 Bq/kg in shells. The bioaccumulation ability in bivalve species with reference to 210 Po was observed to be highly variable

An ecosystem-based approach and management framework for the integrated evaluation of bivalve aquaculture impacts

DEFF Research Database (Denmark)

Cranford, Peter J.; Kamermans, Pauline; Krause, Gesche

2012-01-01

for bivalve aquaculture be based on a tiered indicator monitoring system that is structured on the principle that increased environmental risk requires increased monitoring effort. More than 1 threshold for each indicator would permit implementation of predetermined impact prevention and mitigation measures......An ecosystem-based approach to bivalve aquaculture management is a strategy for the integration of aquaculture within the wider ecosystem, including human aspects, in such a way that it promotes sustainable development, equity, and resilience of ecosystems. Given the linkage between social...... and ecological systems, marine regulators require an ecosystem-based decision framework that structures and integrates the relationships between these systems and facilitates communication of aquaculture–environment interactions and policy-related developments and decisions. The Drivers-Pressures-State Change-Impact-Response...

Ocean acidification increases cadmium accumulation in marine bivalves: a potential threat to seafood safety.

Science.gov (United States)

Shi, Wei; Zhao, Xinguo; Han, Yu; Che, Zhumei; Chai, Xueliang; Liu, Guangxu

2016-01-21

To date, the effects of ocean acidification on toxic metals accumulation and the underlying molecular mechanism remains unknown in marine bivalve species. In the present study, the effects of the realistic future ocean pCO2 levels on the cadmium (Cd) accumulation in the gills, mantle and adductor muscles of three bivalve species, Mytilus edulis, Tegillarca granosa, and Meretrix meretrix, were investigated. The results obtained suggested that all species tested accumulated significantly higher Cd (p ocean acidification-induced increase in Cd accumulation may have occurred due to (i) the ocean acidification increased the concentration of Cd and the Cd(2+)/Ca(2+) in the seawater, which in turn increased the Cd influx through Ca channel; (ii) the acidified seawater may have brought about epithelia damage, resulting in easier Cd penetration; and (iii) ocean acidification hampered Cd exclusion.

High pressure processing of bivalve shellfish and HPP's potential use as a virus intervention

Science.gov (United States)

Bivalve shellfish readily bioconcentrate pathogenic microbes and substance, such as algal and dinoflagulate toxins, fecal viruses and bacteria, and naturally present vibrio bacteria. High pressure processing (HPP) is currently used as an intervention for Vibrio vulnificus bacteria within molluscan ...

Dinophysis caudata generated lipophilic shellfish toxins in bivalves from the Nanji Islands, East China Sea

Science.gov (United States)

Jiang, Tao; Xu, Yixiao; Li, Yang; Qi, Yuzao; Jiang, Tianjiu; Wu, Feng; Zhang, Fan

2014-01-01

A 12-month program of monitoring potentially toxic microalgae (that produce lipophilic shellfish toxins; LSTs) and their toxins in bivalves was conducted from April 2006 to March 2007 in the Nanji Islands, East China Sea. Two Dinophysis species, D. caudata and D. acuminata, were identified, and D. caudata was found to be the dominant species. D. caudata was detected in water samples between April and June 2006, and between February and March 2007. It reached its highest abundances in May, with a mean abundance of 1.38×102 cells/L in surface water and 1.25×102 cells/L in bottom water (cultured bivalves sampled between April and June were contaminated with LSTs, with an average toxicity of 85 μg okadaic acid (OA) eq./100 g meat, which was four times higher than the Chinese regulatory limit (20 μg OA eq./100 g meat). Ten out of fifteen wild samples (66.7%) collected during the same period were positive for LSTs, and contained an average LST toxicity of 45 μg OA eq./100 g meat (more than twice the regulatory value). Cultured Patinopecten yessoensis collected on 15 May 2006 had the highest toxicity, 320 μg OA eq./100 g meat, and relatively high toxicities (80 to 160 μg OA eq./100 g meat) were found in bivalves until the end of July.

Investigation into Cryptosporidium and Giardia in bivalve mollusks farmed in Sardinia region and destined for human consumption

Directory of Open Access Journals (Sweden)

Tiziana Tedde

2013-06-01

Full Text Available Cryptosporidium and Giardia are protozoan parasites transmitted by fecal-oral ingestion of (oocysts, and are responsible for enteritis in several animal species and humans worldwide. These (oocysts can survive for over a year in aquatic environments and can accumulate in bivalve mollusks, which filter large volumes of water. The aim of this study is to evaluate the natural occurrence of Cryptosporidium and Giardia contamination in different specimens of edible bivalves mollusks from farming sites of the western and north-eastern coasts of Sardinia. From April 2011 to February 2012, 1095 specimens of Mytilus galloprovincialis and 240 of Crassostrea gigas were sampled from Olbia and Oristano gulf and San Teodoro pond. Hepatopancreas and gills, including the labial palp, were examined for oocysts and cysts after pooling and homogenisation using different techniques: i staining for light and fluorescence microscopy; ii direct immunofluorescence (IF Merifluor® test Cryptosporidium/ Giardia (Meridian Bioscience Inc., Cincinnati, OH, USA; and iii molecular procedures. However, in the context under study, all mollusks examined with the three main diagnostic techniques were negative for both parasites pointing out the hypothetically low zoonotic risk related to Cryptosporidium and Giardia in bivalves, especially Mytilus galloprovincialis and Crassostrea gigas.

Biochemical and behavioural responses of the endobenthic bivalve Scrobicularia plana to silver nanoparticles in seawater and microalgal food.

Science.gov (United States)

Buffet, Pierre-Emmanuel; Pan, Jin-Fen; Poirier, Laurence; Amiard-Triquet, Claude; Amiard, Jean-Claude; Gaudin, Pierre; Risso-de Faverney, Christine; Guibbolini, Marielle; Gilliland, Douglas; Valsami-Jones, Eugenia; Mouneyrac, Catherine

2013-03-01

Because of their bactericidal effects, Ag nanoparticles (Ag NPs) have promising industrial development but could lead to potential ecological risks. The aim of this study was to examine the uptake and effect of silver (soluble or as lactate Ag NPs of 40 nm) at low concentrations (10 μg L(-1)) in the endobenthic bivalve Scrobicularia plana exposed, for 14 days, directly (water) or via the diet (microalgae). The stability of Ag NPs in seawater was examined using dynamic light scattering. Release of soluble Ag from Ag NPs in the experimental media was quantified by using diffusive gradient in thin film. Bioaccumulation of Ag in bivalves was measured by electrothermal atomic absorption spectrometry. Behavioural and biochemical biomarkers were determined in bivalves. Aggregation of Ag NPs and the release of soluble Ag from Ag NPs were observed in the experimental media. For both forms of Ag, bioaccumulation was much more important for waterborne than for dietary exposure. The response of oxidative stress biomarkers (catalase, glutathion S-transferase, superoxide dismutase) was more important after dietary than waterborne exposure to Ag (soluble and NPs). These defences were relatively efficient since they led to a lack of response of damage biomarkers. Burrowing was not affected for bivalves exposed directly or through the diet to both Ag forms but feeding behaviour was impaired after 10 days of dietary exposure. Since no differences of responses to Ag either soluble or nanoparticulate were observed, it seems that labile Ag released from Ag NPs was mainly responsible for toxicity. Copyright © 2012 Elsevier Inc. All rights reserved.

Assessment of Heavy Metals in Bivalves Molluscs of Apulian Region: a 3-years control activity of a EU Laboratory

Directory of Open Access Journals (Sweden)

Miedico O.

2013-04-01

Full Text Available The bivalve molluscs represent an important matrix to be studied for several reasons. Their nutritional properties make them valuable to the consumers, so that their consumption and commercial value has risen worldwide. Simultaneously, their significant water-filtering capability and their persistence in the same place make them good bio-indicators of marine ecosystems. The presence of the heavy metal contaminants, as Cd, Pb and Hg, was investigated in bivalve molluscs such as mussels (Mytilus galloprovincialis, clams (Venus gallina and oysters (Ostrea edulis. In the present study, a survey was carried out on 334 samples addressed to the Istituto Zooprofilattico Sperimentale – Puglia e Basilicata, Foggia (ITALY between 2009-2011, and collected by official authorities along the coasts of Apulia Region. The conformity of heavy metal content in bivalve molluscs was verified, in according to EC Reg. 1881/2006. The compliance was found for the total amount of samples. The obtained data on heavy metals concentration in bivalve molluscs were compared with data found in monitoring studies on the incidence of heavy metals in 1981 in North-Western Mediterranean Sea, in 2003 in Tyrrhenian Sea and in 2010 in Pacific Ocean (Chile, reported in literature. The information obtained from this work offer an essential database, not only for the authorities involved in food control, but also for the official institutions responsible of a constant control of the marine ecosystem pollution.

Evaluation of the threat of marine CO2 leakage-associated acidification on the toxicity of sediment metals to juvenile bivalves

International Nuclear Information System (INIS)

Basallote, M. Dolores; Rodríguez-Romero, Araceli; De Orte, Manoela R.; Del Valls, T. Ángel; Riba, Inmaculada

2015-01-01

Highlights: • Short-term tests using juveniles of bivalves to study the effects of CO 2 dissolved. • CO 2 causes effects if the threshold concentration of the organism is overlapped. • Flows of escaped CO 2 would affect the geochemical composition of sediment–seawater. • CO 2 -induced acidification would affect differently to marine sediment toxicity. - Abstract: The effects of the acidification associated with CO 2 leakage from sub-seabed geological storage was studied by the evaluation of the short-term effects of CO 2 -induced acidification on juveniles of the bivalve Ruditapes philippinarum. Laboratory scale experiments were performed using a CO 2 -bubbling system designed to conduct ecotoxicological assays. The organisms were exposed for 10 days to elutriates of sediments collected in different littoral areas that were subjected to various pH treatments (pH 7.1, 6.6, 6.1). The acute pH-associated effects on the bivalves were observed, and the dissolved metals in the elutriates were measured. The median toxic effect pH was calculated, which ranged from 6.33 to 6.45. The amount of dissolved Zn in the sediment elutriates increased in parallel with the pH reductions and was correlated with the proton concentrations. The pH, the pCO 2 and the dissolved metal concentrations (Zn and Fe) were linked with the mortality of the exposed bivalves

Burrowing Behavior of a Deposit Feeding Bivalve Predicts Change in Intertidal Ecosystem State

NARCIS (Netherlands)

Compton, T.J.; Bodnar, W.; Koolhaas, A.; Dekinga, A.; Holthuijsen, S.; Ten Horn, J.; McSweeney, N.; van Gils, J.A.; Piersma, T.

2016-01-01

Behavior has a predictive power that is often underutilized as a tool for signaling ecological change. The burrowing behavior of the deposit feeding bivalve Macoma balthica reflects a typical food-safety trade-off. The choice to live close to the sediment surface comes at a risk of predation and is

Burrowing behavior of a deposit feeding bivalve predicts change in intertidal ecosystem state

NARCIS (Netherlands)

Compton, Tanya J.; Bodnar, Wanda; Koolhaas, Anita; Dekinga, Anne; Holthuijsen, Sander; ten Horn, Job; McSweeney, Niamh; van Gils, Jan; Piersma, Theunis

2016-01-01

Behavior has a predictive power that is often underutilized as a tool for signaling ecological change. The burrowing behavior of the deposit feeding bivalve Macoma balthica reflects a typical food-safety trade-off. The choice to live close to the sediment surface comes at a risk of predation and is

Chemosymbiotic bivalves from the mud volcanoes of the Gulf of Cadiz, NE Atlantic, with descriptions of new species of Solemyidae, Lucinidae and Vesicomyidae.

Science.gov (United States)

Olive, Graham; Rodrigues, Clara F; Cunha, Marina R

2011-01-01

The chemosymbiotic bivalves collected from the mud volcanoes of the Gulf of Cadiz are reviewed. Of the thirteen species closely associated with chemosynthetic settings two Solemyidae, Solemya (Petrasma) elarraichensissp. n. and Acharax gadiraesp. n., one Lucinidae, Lucinoma asapheussp. n., and one Vesicomyidae, Isorropodon megadesmussp. n. are described and compared to close relatives of their respective families. The biodiversity and distribution of the chemosymbiotic bivalves in the Gulf of Cadiz are discussed and compared to the available information from other cold seeps in the Eastern Atlantic and Mediterranean. Although there is considerable similarity at the genus level between seep/mud volcano fields in the Eastern Atlantic and Mediterranean, there is little overlap at the species level. This indicates a high degree of endemism within chemosymbiotic bivalve assemblages.

Some physico-chemical and biological characteristics of soil and ...

African Journals Online (AJOL)

Environmental conditions that influence biocorrosion in the Niger Delta area of Nigeria are investigated experimentally by analysing the physico-chemical and biological characteristics of four (4) soil samples and water samples taken from ten (10) selected river bodies in the region. Measured properties of the water ...

Subcellular partitioning of cadmium in the freshwater bivalve, Pyganodon grandis, after separate short-term exposures to waterborne or diet-borne metal

Energy Technology Data Exchange (ETDEWEB)

Cooper, Sophie; Hare, Landis [INRS-Eau, Terre et Environnement, Universite du Quebec, 490 rue de la Couronne, Quebec, QC, G1K 9A9 (Canada); Campbell, Peter G.C., E-mail: peter.campbell@ete.inrs.ca [INRS-Eau, Terre et Environnement, Universite du Quebec, 490 rue de la Couronne, Quebec, QC, G1K 9A9 (Canada)

2010-11-15

The dynamics of cadmium uptake and subcellular partitioning were studied in laboratory experiments conducted on Pyganodon grandis, a freshwater unionid bivalve that shows promise as a biomonitor for metal pollution. Bivalves were collected from an uncontaminated lake, allowed to acclimate to laboratory conditions ({>=}25 days), and then either exposed to a low, environmentally relevant, concentration of dissolved Cd (5 nM; 6, 12 and 24 h), or fed Cd-contaminated algae ({approx}70 nmol Cd g{sup -1} dry weight; 4 x 4 h). In this latter case, the bivalves were allowed to depurate for up to 8 days after the end of the feeding phase. As anticipated, the gills were the main target organ during the aqueous Cd exposure whereas the intestine was the initial site of Cd accumulation during the dietary exposure; during the subsequent depuration period, the dietary Cd accumulated in both the digestive gland and in the gills. For the gills, the distribution of Cd among the subcellular fractions (i.e., granules > heat-denatured proteins (HDP) {approx} heat-stable proteins (HSP) > mitochondria {approx} lysosomes + microsomes) was insensitive to the exposure route; both waterborne and diet-borne Cd ended up largely bound to the granule fraction. The subcellular distribution of Cd in the digestive gland differed markedly from that in the gills (HDP > HSP {approx} granules {approx} mitochondria > lysosomes + microsomes), but as in the case of the gills, this distribution was relatively insensitive to the exposure route. For both the gills and the digestive gland, the subcellular distributions of Cd differed from those observed in native bivalves that are chronically exposed to Cd in the field - in the short-term experimental exposures of P. grandis, metal detoxification was less effective than in chronically exposed native bivalves.

Impact of seawater carbonate chemistry on the calcification of marine bivalves

OpenAIRE

Thomsen Jörn; Haynert Kristin; Wegner K Mathias; Melzner Frank

2015-01-01

Bivalve calcification, particular of the early larval stages is highly sensitive to the change of ocean carbonate chemistry resulting from atmospheric CO2 uptake. Earlier studies suggested that declining seawater [CO32−] and thereby lowered carbonate saturation affect shell production. However, disturbances of physiological processes such as acid-base regulation by adverse seawater pCO2 and pH can affect calcification in a secondary fashion. In order to determine the e...

Reproductive investment in the intertidal bivalve Macoma balthica

Science.gov (United States)

Honkoop, P. J. C.; Van der Meer, J.; Beukema, J. J.; Kwast, D.

1999-05-01

Bivalve eggs generally contain large amounts of lipids which, in comparison with proteins and carbohydrates, have high energy contents and are thus costly in energetic terms. As lipid contents vary between species, comparisons of reproductive investments should not only include numbers and sizes of eggs, but also their energy content. We estimated the investment in egg material of mature females of the Baltic tellin Macoma balthica (L.) in terms of both mass and energy content. All mass below a minimum body mass (below which no eggs are produced) was defined as structural mass. This threshold amounts to a body mass index (BMI) of 5.6 (ash-free dry mass per cubic shell length in mg cm -3). More than half (55%) of the mass above the structural mass was invested in egg material and 45% in extra somatic tissue and tissue for production and storage of gametes. This means that the amount of eggs spawned ranged from 0 (at BMI = 5.6 mg cm -3) to 33% of the total ash-free dry mass (at a high BMI value of 14 mg cm -3). Eggs contained a relatively large amount of lipids, about 30% of their ash-free dry mass, whereas non-egg material contained only about 7% lipids. Eggs of two other bivalves in the Wadden Sea, the cockle Cerastoderma edule and the mussel Mytilus edulis, were smaller and contained only about 11% and 20% lipids, respectively. Energy content of M. balthica eggs amounted to ˜0.006 J, in the other two species to ˜0.002 J. The function of the more expensive eggs in M. balthica may be related to its early spawning in spring, causing slower larval development until first feeding.

Predation on intertidal mussels: Influence of biotic factors on the survival of epibenthic bivalve beds

NARCIS (Netherlands)

Waser, A.M.

2018-01-01

Coastal areas are amongst the most productive ecosystems in the world. Important components of these coastal areas are reef-forming bivalves such as mussels and oysters, as they have important facilitating effects on many associated organisms through the provision of substratum,

Effects of arctic temperatures on distribution and retention of the nuclear waste radionuclides 241Am, 57Co, and 137Cs in the bioindicator bivalve Macoma balthica

Science.gov (United States)

Hutchins, D.A.; Stupakoff, I.; Hook, S.; Luoma, S.N.; Fisher, N.S.

1998-01-01

The disposal of radioactive wastes in Arctic seas has made it important to understand the processes affecting the accumulation of radionuclides in food webs in coldwater ecosystems. We examined the effects of temperature on radionuclide assimilation and retention by the bioindicator bivalve Macoma balthica using three representative nuclear waste components, 241Am, 57Co, and 137Cs. Experiments were designed to determine the kinetics of processes that control uptake from food and water, as well as kinetic constants of loss. 137Cs was not accumulated in soft tissue from water during short exposures, and was rapidly lost from shell with no thermal dependence. No effects of temperature on 57Co assimilation or retention from food were observed. The only substantial effect of polar temperatures was that on the assimilation efficiency of 241Am from food, where 10% was assimilated at 2??C and 26% at 12??C. For all three radionuclides, body distributions were correlated with source, with most radioactivity obtained from water found in the shell and food in the soft tissues. These results suggest that in general Arctic conditions had relatively small effects on the biological processes which influence the bioaccumulation of radioactive wastes, and bivalve concentration factors may not be appreciably different between polar and temperate waters.

Environmental influence on population dynamics of the bivalve Anomalocardia brasiliana

Science.gov (United States)

Corte, Guilherme Nascimento; Coleman, Ross A.; Amaral, A. Cecília Z.

2017-03-01

Understanding how species respond to the environment in terms of population attributes (e.g. abundance, growth, mortality, fecundity, and productivity) is essential to protect ecologically and economically important species. Nevertheless, responses of macrobenthic populations to environmental features are overlooked due to the need of consecutive samplings and time-consuming measurements. We examined the population dynamics of the filter-feeding bivalve Anomalocardia brasiliana on a tidal flat over the course of one year to investigate the hypothesis that, as accepted for macrobenthic communities, populations inhabiting environments with low hydrodynamic conditions such as tidal flat should have higher attributes than populations inhabiting more energetic habitats (i.e. areas more influenced by wave energy such as reflective and intermediate beaches). This would be expected because the harsh conditions of more energetic habitats force organisms to divert more energy towards maintenance, resulting in lower population attributes. We found that A. brasiliana showed moderate growth and secondary production at the study area. Moreover the recruitment period was restricted to a few months. A comparison with previous studies showed that, contrary to expected, A. brasiliana populations from areas with low hydrodynamic conditions have lower abundance, growth, recruitment and turnover rate. It is likely that morphodynamic characteristics recorded in these environments, such as larger periods of air exposure and lower water circulation, may affect food conditions for filter-feeding species and increase competition. In addition, these characteristics may negatively affect macrobenthic species by enhancing eutrophication processes and anoxia. Overall, our results suggest that models accepted and applied at the macrobenthic community level might not be directly extended to A. brasiliana populations.

Biological characteristics of crucian by quantitative inspection method

Science.gov (United States)

Chu, Mengqi

2015-04-01

Biological characteristics of crucian by quantitative inspection method Through quantitative inspection method , the biological characteristics of crucian was preliminary researched. Crucian , Belongs to Cypriniformes, Cyprinidae, Carassius auratus, is a kind of main plant-eating omnivorous fish,like Gregarious, selection and ranking. Crucian are widely distributed, perennial water all over the country all have production. Determine the indicators of crucian in the experiment, to understand the growth, reproduction situation of crucian in this area . Using the measured data (such as the scale length ,scale size and wheel diameter and so on) and related functional to calculate growth of crucian in any one year.According to the egg shape, color, weight ,etc to determine its maturity, with the mean egg diameter per 20 eggs and the number of eggs per 0.5 grams, to calculate the relative and absolute fecundity of the fish .Measured crucian were female puberty. Based on the relation between the scale diameter and length and the information, linear relationship between crucian scale diameter and length: y=1.530+3.0649. From the data, the fertility and is closely relative to the increase of age. The older, the more mature gonad development. The more amount of eggs. In addition, absolute fecundity increases with the pituitary gland.Through quantitative check crucian bait food intake by the object, reveals the main food, secondary foods, and chance food of crucian ,and understand that crucian degree of be fond of of all kinds of bait organisms.Fish fertility with weight gain, it has the characteristics of species and populations, and at the same tmes influenced by the age of the individual, body length, body weight, environmental conditions (especially the nutrition conditions), and breeding habits, spawning times factors and the size of the egg. After a series of studies of crucian biological character, provide the ecological basis for local crucian's feeding, breeding

Does mating interfere in the biological characteristics of a population of Trichogramma pretiosum?

Directory of Open Access Journals (Sweden)

DIRCEU PRATISSOLI

2014-03-01

Full Text Available Trichogramma spp. are parasitoids used in the regulation of insect populations that can cause economic damage. In order to ensure good performance, understanding some of their biological characteristics is essential. The objective of this study is to evaluate whether mating interferes with the biological characteristics of a population of Trichogramma pretiosum collected in the field. In all experiments, groups of mated and unmated females were used. We also verified any interference from mating on the biological characteristics of the offspring. We found that mating can alter the parasitism and longevity of genitor females, in addition to changing longevity among the descendants, but once parasitized, the eggs develop normally, showing similar emergence percentage and number of offspring as those from unmated females. In addition, we verified that the population of T. pretiosum collected in the field presented individuals with reproductive thelytokous and arrhenotokous characteristics. This fact highlights the importance of careful investigation on the reproduction mode of populations collected in the field, thus avoiding problems in the effective management of insect populations.

Sodium provides unique insights into transgenerational effects of ocean acidification on bivalve shell formation.

Science.gov (United States)

Zhao, Liqiang; Schöne, Bernd R; Mertz-Kraus, Regina; Yang, Feng

2017-01-15

Ocean acidification is likely to have profound impacts on marine bivalves, especially on their early life stages. Therefore, it is imperative to know whether and to what extent bivalves will be able to acclimate or adapt to an acidifying ocean over multiple generations. Here, we show that reduced seawater pH projected for the end of this century (i.e., pH7.7) led to a significant decrease of shell production of newly settled juvenile Manila clams, Ruditapes philippinarum. However, juveniles from parents exposed to low pH grew significantly faster than those from parents grown at ambient pH, exhibiting a rapid transgenerational acclimation to an acidic environment. The sodium composition of the shells may shed new light on the mechanisms responsible for beneficial transgenerational acclimation. Irrespective of parental exposure, the amount of Na incorporated into shells increased with decreasing pH, implying active removal of excessive protons through the Na + /H + exchanger which is known to depend on the Na + gradient actively built up by the Na + /K + -ATPase as a driving force. However, the shells with a prior history of transgenerational exposure to low pH recorded significantly lower amounts of Na than those with no history of acidic exposure. It therefore seems very likely that the clams may implement less costly and more ATP-efficient ion regulatory mechanisms to maintain pH homeostasis in the calcifying fluid following transgenerational acclimation. Our results suggest that marine bivalves may have a greater capacity to acclimate or adapt to ocean acidification by the end of this century than currently understood. Copyright © 2016 Elsevier B.V. All rights reserved.

An ecosystem-based approach and management framework for the integrated evaluation of bivalve aquaculture impacts

NARCIS (Netherlands)

Cranford, P.J.; Kamermans, P.; Krause, G.H.M.; Mazurie, J.

2012-01-01

An ecosystem-based approach to bivalve aquaculture management is a strategy for the integration of aquaculture within the wider ecosystem, including human aspects, in such a way that it promotes sustainable development, equity, and resilience of ecosystems. Given the linkage between social and

The determination of B and Sr isotopes of quaternary biologic fossils in Yanghuzhuang Yanqing basin and their living environment

International Nuclear Information System (INIS)

Xiao Yingkai; Xiao Jun; Zhao Zhiqi; He Maoyong; Li Shizhen

2007-01-01

The B and Sr isotopic compositions of early Quaternary biologic fossils in Yanghuzhuang and living bivalves in Weishui river were measured. Comparing with the data of marine foraminifer, the results show a non-marine living environment for these foraminifers lived in early Quaternary in Yanghuzhuang, Yanqing; Basin. (authors)

Using biochemical and isotope geochemistry to understand the environmental and public health implications of lead pollution in the lower Guadiana River, Iberia: A freshwater bivalve study

Energy Technology Data Exchange (ETDEWEB)

Company, R. [CIMA, Faculty of Marine and Environmental Sciences, University of Algarve, Campus de Gambelas, 8005-139 Faro (Portugal)], E-mail: rcompany@ualg.pt; Serafim, A.; Lopes, B.; Cravo, A. [CIMA, Faculty of Marine and Environmental Sciences, University of Algarve, Campus de Gambelas, 8005-139 Faro (Portugal); Shepherd, T.J.; Pearson, G. [Department of Earth Sciences, Durham University, Science Labs., Durham DH1 3LE (United Kingdom); Bebianno, M.J. [CIMA, Faculty of Marine and Environmental Sciences, University of Algarve, Campus de Gambelas, 8005-139 Faro (Portugal)], E-mail: mbebian@ualg.pt

2008-11-01

Lead is a natural component of aquatic ecosystems with no known biological role and is highly toxic. Its toxicity stems from its ability to mimic biologically important metals and to produce membrane damage through lipid peroxidation (LPO). Most lead poisoning symptoms are thought to occur by interfering with an essential enzyme, {delta}-aminolevulinic acid dehydratase (ALAD), the activity of which is markedly inhibited by lead. The purpose of this work was to study the levels and effects of lead pollution (responses of ALAD and oxidative stress biomarker LPO) in the freshwater bivalve Corbicula fluminea along the lower Guadiana River (Portugal and Spain); a major river system impacted by historic mining pollution and more recent anthropogenic inputs. The results show that the enzymatic activity of ALAD is negatively correlated with the total Pb concentration of the whole tissue suggesting that ALAD has considerable potential as a biomarker of lead exposure in C. fluminea. To identify the sources of lead to which bivalves have been exposed, high precision {sup 206}Pb/{sup 204}Pb, {sup 207}Pb/{sup 204}Pb, {sup 208}Pb/{sup 204}/Pb ratios for C. fluminea confirm that historical mining activities in the Iberian Pyrite Belt are the dominant source of lead pollution in the lower Guadiana River. The isotope patterns however exhibit marked seasonal and geographic variation in response to rainfall and river water management. Locally, other anthropogenic sources of lead have been detected in C. fluminea close to population centres, thus adding to its versatility as a freshwater bio-indicator. Overall, the study highlights the value of natural ecosystems as monitors of water quality and their importance for public health assessment and surveillance.

Using biochemical and isotope geochemistry to understand the environmental and public health implications of lead pollution in the lower Guadiana River, Iberia: a freshwater bivalve study.

Science.gov (United States)

Company, R; Serafim, A; Lopes, B; Cravo, A; Shepherd, T J; Pearson, G; Bebianno, M J

2008-11-01

Lead is a natural component of aquatic ecosystems with no known biological role and is highly toxic. Its toxicity stems from its ability to mimic biologically important metals and to produce membrane damage through lipid peroxidation (LPO). Most lead poisoning symptoms are thought to occur by interfering with an essential enzyme, delta-aminolevulinic acid dehydratase (ALAD), the activity of which is markedly inhibited by lead. The purpose of this work was to study the levels and effects of lead pollution (responses of ALAD and oxidative stress biomarker LPO) in the freshwater bivalve Corbicula fluminea along the lower Guadiana River (Portugal and Spain); a major river system impacted by historic mining pollution and more recent anthropogenic inputs. The results show that the enzymatic activity of ALAD is negatively correlated with the total Pb concentration of the whole tissue suggesting that ALAD has considerable potential as a biomarker of lead exposure in C. fluminea. To identify the sources of lead to which bivalves have been exposed, high precision (206)Pb/(204)Pb, (207)Pb/(204)Pb, (208)Pb/(204)/Pb ratios for C. fluminea confirm that historical mining activities in the Iberian Pyrite Belt are the dominant source of lead pollution in the lower Guadiana River. The isotope patterns however exhibit marked seasonal and geographic variation in response to rainfall and river water management. Locally, other anthropogenic sources of lead have been detected in C. fluminea close to population centres, thus adding to its versatility as a freshwater bio-indicator. Overall, the study highlights the value of natural ecosystems as monitors of water quality and their importance for public health assessment and surveillance.

Using biochemical and isotope geochemistry to understand the environmental and public health implications of lead pollution in the lower Guadiana River, Iberia: A freshwater bivalve study

International Nuclear Information System (INIS)

Company, R.; Serafim, A.; Lopes, B.; Cravo, A.; Shepherd, T.J.; Pearson, G.; Bebianno, M.J.

2008-01-01

Lead is a natural component of aquatic ecosystems with no known biological role and is highly toxic. Its toxicity stems from its ability to mimic biologically important metals and to produce membrane damage through lipid peroxidation (LPO). Most lead poisoning symptoms are thought to occur by interfering with an essential enzyme, δ-aminolevulinic acid dehydratase (ALAD), the activity of which is markedly inhibited by lead. The purpose of this work was to study the levels and effects of lead pollution (responses of ALAD and oxidative stress biomarker LPO) in the freshwater bivalve Corbicula fluminea along the lower Guadiana River (Portugal and Spain); a major river system impacted by historic mining pollution and more recent anthropogenic inputs. The results show that the enzymatic activity of ALAD is negatively correlated with the total Pb concentration of the whole tissue suggesting that ALAD has considerable potential as a biomarker of lead exposure in C. fluminea. To identify the sources of lead to which bivalves have been exposed, high precision 206 Pb/ 204 Pb, 207 Pb/ 204 Pb, 208 Pb/ 204 /Pb ratios for C. fluminea confirm that historical mining activities in the Iberian Pyrite Belt are the dominant source of lead pollution in the lower Guadiana River. The isotope patterns however exhibit marked seasonal and geographic variation in response to rainfall and river water management. Locally, other anthropogenic sources of lead have been detected in C. fluminea close to population centres, thus adding to its versatility as a freshwater bio-indicator. Overall, the study highlights the value of natural ecosystems as monitors of water quality and their importance for public health assessment and surveillance

Evaluation of the threat of marine CO{sub 2} leakage-associated acidification on the toxicity of sediment metals to juvenile bivalves

Energy Technology Data Exchange (ETDEWEB)

Basallote, M. Dolores, E-mail: dolores.basallote@uca.es [Cátedra UNESCO/UNITWIN WiCop, Departamento de Química-Física, Facultad de Ciencias del Mar y Ambientales, Universidad de Cádiz, Polígono Río San Pedro s/n, 11510 Puerto Real, Cádiz (Spain); Rodríguez-Romero, Araceli [Departamento de Ecología y Gestión Costera, Instituto de Ciencias Marinas de Andalucía (CSIC), Campus Río San Pedro, 11510 Puerto Real, Cádiz (Spain); De Orte, Manoela R.; Del Valls, T. Ángel; Riba, Inmaculada [Cátedra UNESCO/UNITWIN WiCop, Departamento de Química-Física, Facultad de Ciencias del Mar y Ambientales, Universidad de Cádiz, Polígono Río San Pedro s/n, 11510 Puerto Real, Cádiz (Spain)

2015-09-15

Highlights: • Short-term tests using juveniles of bivalves to study the effects of CO{sub 2} dissolved. • CO{sub 2} causes effects if the threshold concentration of the organism is overlapped. • Flows of escaped CO{sub 2} would affect the geochemical composition of sediment–seawater. • CO{sub 2}-induced acidification would affect differently to marine sediment toxicity. - Abstract: The effects of the acidification associated with CO{sub 2} leakage from sub-seabed geological storage was studied by the evaluation of the short-term effects of CO{sub 2}-induced acidification on juveniles of the bivalve Ruditapes philippinarum. Laboratory scale experiments were performed using a CO{sub 2}-bubbling system designed to conduct ecotoxicological assays. The organisms were exposed for 10 days to elutriates of sediments collected in different littoral areas that were subjected to various pH treatments (pH 7.1, 6.6, 6.1). The acute pH-associated effects on the bivalves were observed, and the dissolved metals in the elutriates were measured. The median toxic effect pH was calculated, which ranged from 6.33 to 6.45. The amount of dissolved Zn in the sediment elutriates increased in parallel with the pH reductions and was correlated with the proton concentrations. The pH, the pCO{sub 2} and the dissolved metal concentrations (Zn and Fe) were linked with the mortality of the exposed bivalves.

Abundance, biomass and caloric content of Chukchi Sea bivalves and association with Pacific walrus (Odobenus rosmarus divergens) relative density and distribution in the northeastern Chukchi Sea

Science.gov (United States)

Young, Jordann K.; Black, Bryan A.; Clarke, Janet T.; Schonberg, Susan V.; Dunton, Kenneth H.

2017-10-01

The northeastern Chukchi Sea is a shallow subarctic shelf ecosystem that supports a substantial benthic infaunal community of which bivalves are a major component. We assessed the patterns in population abundance, biomass, and caloric content of ten dominant bivalve taxa in relation to the distribution of the upper trophic level consumer Pacific walrus (Odobenus rosmarus divergens). Bivalves were collected over four cruises in the northeastern Chukchi Sea (2009, 2010, 2012, 2013). Our samples were largely dominated by calorie-dense, deposit-feeding species, including Macoma spp., Ennucula tenuis, Nuculana spp. and Yoldia spp. Weight-frequency distributions were strongly right-skewed for most taxa, though some showed evidence of a bimodal distribution. Caloric densities as measured through bomb calorimetry significantly differed among taxa (ANOVA F = 32.57, df = 9, p-valueanimal wet weight was found to be a reliable predictor of whole animal caloric content. Bivalve populations and peak caloric densities were centered on and to the southeast of Hanna Shoal, which coincided with peak Pacific walrus relative density (walruses per km surveyed) from July through October. Significant differences in mean caloric values were found between areas with and without walruses present (student's t-test, t=-2.9088, df = 252.24, p-value = 0.003952), as well as between areas with low and high walrus relative densities in the pooled annual dataset and in each individual month except October (ANOVA, p-value<0.05). The high-calorie deposit feeders that dominate these bivalve communities preferentially consume food sources, such as sea ice algae, that are likely to be affected by shifting sea ice dynamics. As such, continued warming has the potential to alter bivalve communities in the northeastern Chukchi Sea, which may have profound implications for upper trophic levels.

Prediction of Some Biological Film Characteristic

International Nuclear Information System (INIS)

Ibrahim, G.; Khalaf, K.

2004-01-01

A multi components biofilm model has been developed and discussed which accounts for all well established biological processes with biofilm(s): s ubstrate utilization [aerobically, axenically and anaerobically]. D enitrification process. n itrification process. t he effect of diffusion and mass transfer limitations. The model has predicted some important characteristics of bio films such as:- s pace distribution of substrate(s) within bio films. W eight or thickness of biofilm layer (aerobic layer, anoxic layer and anaerobic layer). The results indicates that the relative thickness of biofilm layers (aerobically, anoxically and anaerobic) is highly affected by the availability of the main electron acceptor (O 2 and NO 3 and the organic load)

Limits in the evolution of biological form: a theoretical morphologic perspective.

Science.gov (United States)

McGhee, George R

2015-12-06

Limits in the evolution of biological form can be empirically demonstrated by using theoretical morphospace analyses, and actual analytic examples are given for univalved ammonoid shell form, bivalved brachiopod shell form and helical bryozoan colony form. Limits in the evolution of form in these animal groups can be shown to be due to functional and developmental constraints on possible evolutionary trajectories in morphospace. Future evolutionary-limit research is needed to analyse the possible existence of temporal constraint in the evolution of biological form on Earth, and in the search for the possible existence of functional alien life forms on Titan and Triton that are developmentally impossible for Earth life.

Contamination of raw bivalve molluscs available in Poland between 2009 and 2013 with marine biotoxins

Directory of Open Access Journals (Sweden)

Michalski Mirosław

2016-12-01

Full Text Available Introduction: Growing consumption of shellfish is associated with an increased risk of food poisoning. The study was carried out on live bivalve molluscs available on the Polish market between 2009 and 2013. Material and Methods: ELISA was used for the determination of the following marine biotoxins: paralytic shellfish poison (PSP, amnaesic shellfish poison (ASP, and diarrhoeic shellfish poison (DSP. The molluscs, of which seven species were examined, were obtained from wholesale companies and markets. Results: Marine biotoxins were detected below the permitted levels in 67.6% of the samples. The maximum amounts of PSP and ASP biotoxins were found in great scallops (532.6 μg/kg and 1.0 mg/kg respectively and the peak for DSP was in blue mussels (107 μg/kg. Conclusion: The analysis of toxicological status of raw bivalve molluscs available on the market in Poland indicates that they are safe for consumers.

Plio-Pleistocene extinctions and immigration credit reflected in the size-frequency distribution of Mediterranean marine bivalves

Science.gov (United States)

Nawrot, Rafal; Zuschin, Martin; Chattopadhyay, Devapriya

2015-04-01

Following the opening of the Suez Canal hundreds of Red Sea species have entered the Mediterranean Sea making it a global hot spot of marine bioinvasion. With the ongoing influx of the subtropical and tropical alien species and increasing sea surface temperatures, the Mediterranean biota is currently gaining a more tropical character and increasingly becoming a mixture of faunal stocks with different evolutionary histories. This susceptibility to invasion was suggested to reflect the presence of an empty ecological space left after decimation of incumbent warm-water fauna during Plio-Pleistocene climate fluctuations. As molluscs are among the most prolific immigrants, we test this hypothesis using data on taxonomic composition and body size of Pliocene Mediterranean bivalves derived from the literature sources and museum collections. The Pliocene inter-specific size-frequency distribution (SFD) is strikingly similar to the SFDs of the Recent Red Sea bivalve fauna, in spite of different biogeographic provenance and the absence of true reef ecosystems in the Pliocene of the Mediterranean region. In contrast, body-size patterns in both assemblages are significantly different from the present-day Mediterranean fauna characterized by smaller median and modal size. Our preliminary results suggest that the distinct shape of the modern Mediterranean SFD may reflect the selective nature of the late Piacenzian - Galesian (Late Pliocene - Early Pleistocene) extinctions pulses related to the onset of the Northern Hemisphere glaciations. These extinctions affected almost 40% of Pliocene species and were biased towards large-bodied taxa. They were not followed by re-immigration of warm-water species owing to the isolation from the tropical Atlantic biota by the cold upwelling along the NW coasts of Africa. The resulting invasion credit (sensu Jackson & Sax, 2010) is currently being paid by the Red Sea bivalves colonizing the Mediterranean Sea through the Suez Canal. Successful

Dosimetric characteristics of biological effect of sulfur-35

International Nuclear Information System (INIS)

Borisova, V.V.

1990-01-01

Experimental materials related to evaluation of dosimetric characteristics of sulfur-35 are presented. Hemogenic organs are subjected to greatest influence especially in the first hours after radionuclide entry into the organism. Comparison is made of absorbed doses in blood with observed blastomogen effect of hemogenic organs. It is noted, that quantitative evaluation of relative biological efficiency of low energy beta-emitters should be performed with account of dosimetric peculiarities of the nuclides mentioned above. 10 refs.; 3 tabs

Crystallography of biological fluid as a method for evaluating its physicochemical characteristics.

Science.gov (United States)

Martusevich, A K; Kamakin, N F

2007-03-01

Using an integral qualitative and quantitative approach to the studies of initiation of the biological material crystallogenesis, we showed in experiments with normal human saliva that the external characteristics of biological fluid (pH, osmolality, and environmental temperature) determine the results of crystallization (tesigraphic facies). The main external (macroenvironment) and inner (microenvironment) factors of biological fluid crystal formation, determining specific features of the tesigraphic facies, were distinguished and classified. The informative value of differential analysis of biomaterial properties by means of modulating the environmental conditions is established.

Statistical Modeling of Radiative Transfer and Transient Characteristics for Multilayer Biological Tissue

Directory of Open Access Journals (Sweden)

S. Yu. Makarov

2014-01-01

Full Text Available The Monte-Carlo method [1] already long ago proved itself as a powerful and universal tool for mathematical modelling in various areas of science and engineering. Researchers often choose this method when it is difficult to find a solution by other ways (or impossible at all, e.g. because of sophisticated analytical dependences, area of modelling or boundary conditions. Certainly, this necessarily statistical and flexible method requires significant computation time, but a continuously increasing computation capability makes it more and more attractive for a choice in specific situation.One of the promising areas to use the method of statistical modelling is description of light propagation in the turbid (scattering media. A high motivation for development of this approach is widely used lasers in biomedicine [3]. Besides, owing to its flexibility, the Monte-Carlo method is also of importance in theoretical researches, in particular, to estimate a degree of adequacy of the offered approximation methods for solving a radiative transfer equation [4].It is known that key parameters of turbid media are an absorption coefficient (characterizes absorption probability of a photon per unit of path length and a scattering coefficient (characterizes scattering probability of a photon per unit of path length. The ratio of each of the coefficients to their sum (extinction defines a probability of "death" or "survival" of a photon, respectively, in interaction with lenses. Generally, in the scattering medium there is a non-coherent radiation component, which in turbid media such as biological tissues, already at the insignificant depth becomes prevailing over the coherent one (residual of the incident laser beam [5].The author used the Monte-Carlo method to simulate optical radiation propagation in the multilayer biological tissues with their optical characteristics corresponding to the skin and subcutaneous tissues. Such a biological tissue is the absorbing

Uniform Variation in Genetic-Traits of a Marine Bivalve Related to Starvation, Pollution and Geographic Clines

NARCIS (Netherlands)

Hummel, H.; Bogaards, R.H.; Amiard-Triquet, C.; Bachelet, G.; Desprez, M.; Marchand, J.; Rybarczyk, H.; Sylvand, B.; De Wit, Y.; De Wolf, L.

1995-01-01

Consistent patterns of genetic variation in the marine bivalve Macoma balthica (L.) were found after exposure to low levels of copper, starvation, and along geographic dines. The geographic dines were related to temperature and salinity. Genetic differences were primarily found in the LAP (Leucine

Biology, seed characteristics and growth establishment of comfrey (Symphytum officinale L.)

OpenAIRE

KOVÁŘOVÁ, Jaroslava

2016-01-01

The thesis titled "Biology, seed characteristics and growth establishment of common comfrey (Symphytum officinale L.)" dealt with the evaluation methods of reproduction comfrey and evaluation of the impact of environmental conditions to the grow of comfrey. Further it dealt with germination tests and their statistical evaluation while respecting the specific work with seeds. They were evaluated seed characteristics, which are reflected in the growth of these plants arising both in soil and in...

Rhythmic patterns in ancient shells: Can we reconstruct sub-annual cyclicity in trace element and stable isotope profiles from rudist bivalves?

Science.gov (United States)

de Winter, N.; Sinnesael, M.; Vansteenberge, S.; Goderis, S.; Snoeck, C.; Van Malderen, S. J. M.; Vanhaecke, F. F.; Claeys, P.

2017-12-01

Well-preserved shells of Torreites rudists from the Late Campanian Saiwan Formation in Oman exhibit fine internal layering. These fine (±20 µm) laminae are rhythmically bundled (±400 µm) and subdivide the shells' larger scale annual lamination (±15 mm), suggesting the presence of several interfering cycles in shell growth rate. The aim of the present study is to determine the duration and chemical signature of these rhythmic variations in shell composition. To achieve this, a range of micro-analytical techniques is applied on cross sections through the shells. Firstly, microscopy-based layer counting and colorimetric analysis are carried out on thin sections of shell calcite. Secondly, X-Ray Fluorescence (XRF) and Fourier Transform InfraRed (FTIR) mapping of cross sections of the shells reveal chemical and structural differences between laminae in 2D. Thirdly, high-resolution XRF (25 µm) and Laser Ablation Inductively Coupled Plasma Mass Spectrometry (LA-ICP-MS; 10 µm) trace element profiles are used to quantify variations in chemical composition between shell laminae. Fourthly, annual chronology is established based on micro-sampled stable carbon and oxygen stable isotope measurements (250 µm) along the growth axis of the shells. Finally, spectral analysis routines are applied to extract rhythmic patterns matched to the shell laminae from the structural, chemical and colorimetric data. Combining these methods allows for a full evaluation of the structural and chemical characteristics as well as the timing of sub-annual lamination in rudist shells. The results of this study shed light on the external factors that influenced growth rates in rudist bivalves. A better understanding of the timing of deposition of these laminae allows them to be used to improve age models of geochemical records in rudist shells. Characterization of small scale variations in shell composition will characterize the uncertainties contained within lower resolution proxy records from

Biomonitoring of Heavy metals using the bivalve molluscs in sunderban mangrove wetland, Northeast Coast of Bay of bengal (india): possible risks to Human health

Energy Technology Data Exchange (ETDEWEB)

Cabral, Henrique; Cardoso, Ines [Departamento de Biologia Animal/Instituto de Oceanografia, Campo Grande, Lisboa (Portugal); Chatterjee, Mousumi; Kumar Bhattacharya, Asok; Aftab Alam, Mohammad [Department of Marine Science, University of Calcutta, Calcutta (India); Kanta Satpathy, Kamala [Indira Gandhi Centre for Atomic Research, Environmental and Industrial Safety Section, Safety Group, Kalpakkam, Tamil Nadu (India); Kumar Sarkar, Santosh

2008-02-15

The suitability of using four bivalve molluscs (Sanguinolaria acuminata, Anadara granosa, Meretrix meretrix, and Pelecyora trigona) in biomonitoring of heavy metals (Cu, Pb, Cd, Zn, and Hg) collected from intertidal regions of the Sunderban mangrove wetland, northeastern part of the Bay of Bengal, were evaluated. Both speciesdependent variability and temporal variations were pronounced. A high degree of organ specificity was evident in the bivalves where gill and mantle exhibited higher metal accumulation due to ion exchange property of the mucous layer covering these organs while shells represent very poor accumulation. Elevated values of Zn and Cu reflect high potential for biomagnification through marine food chain. Metal concentrations in different body size groups of the bivalves do not follow uniform trend. Correlation coefficient between different metal couplings as tested statistically revealed significant coupling for Pb-Zn, Pb-Cu, Zn-Cu, and Hg-Cu. Concentrations of all the metals in specific organs (visceral mass, mantle and gill) of the bivalves exceeded the safe levels according to the international standards for metals compiled by Food and Agricultural Organization of the United Nations and would be of great risk for human consumption. It is concluded that the mussel and clam are suitable biomonitors to employ in programs designed to assess changes in metal pollution in the Sunderban mangrove wetland. (Abstract Copyright [2008], Wiley Periodicals, Inc.)

Microplastics in bivalves cultured for human consumption.

Science.gov (United States)

Van Cauwenberghe, Lisbeth; Janssen, Colin R

2014-10-01

Microplastics are present throughout the marine environment and ingestion of these plastic particles (microplastics in two species of commercially grown bivalves: Mytilus edulis and Crassostrea gigas. Microplastics were recovered from the soft tissues of both species. At time of human consumption, M. edulis contains on average 0.36 ± 0.07 particles g(-1) (wet weight), while a plastic load of 0.47 ± 0.16 particles g(-1) ww was detected in C. gigas. As a result, the annual dietary exposure for European shellfish consumers can amount to 11,000 microplastics per year. The presence of marine microplastics in seafood could pose a threat to food safety, however, due to the complexity of estimating microplastic toxicity, estimations of the potential risks for human health posed by microplastics in food stuffs is not (yet) possible. Copyright © 2014 Elsevier Ltd. All rights reserved.

Boreholes on three bivalve species found on the sand beach at Sagot Cape, Baengnyeongdo, Korea

Directory of Open Access Journals (Sweden)

Dal-Yong Kong

2017-12-01

Full Text Available Circular to subcircular boreholes were found on the surfaces of three different bivalve shells (Mactra chinensis, Felaniella usta, and Nuttallia japonica that were pushed onto the sand beach at Sagot Cape, Baengnyeongdo, Korea. The boreholes are characterized by beveled holes that are parabolic in cross section. The boreholes are classified into the ichnospecies Oichnus paraboloides, probably drilled by a naticid gastropod Glossaulax didyma didyma living in the Baengnyeong tidal flat. In the case of Mactrashells, boreholes are observed more or less evenly on left and right valves, and 96% of boreholes are located on the umbo. This may suggest that the life position of the Baengnyeong bivalves did not dictate the preference of G. didyma didyma in the Baengnyeong tidal flat ecosystem. The clustered distribution of the boreholes in the umbo area indicates a strong site selectivity for boreholes that is quite a common phenomenon in many naticid gastropods. Keywords: Baengnyeongdo, Mactra chinensis, Naticid gastropods, Oichnus paraboloides, Prey–predator interactions

Metals and organotins in multiple bivalve species in a one-off global survey

DEFF Research Database (Denmark)

Larsen, Martin Mørk; Strand, Jakob; Christensen, Jan H.

2011-01-01

contamination levels on a global scale. Metal concentrations in nine bivalve species were normalised to the Mytilidae family using conversion factors based on cosampled species and literature bioconcentration factors. The lowest metal and tributyltin concentrations were below background assessment...... were low, but not always lower than expected impacted areas. The most contaminated areas were harbours, where especially Copenhagen, St Croix and Sydney, can be considered hotspots of tributyltin as well as a number of metals....

Some effects of temperature and starvation on the bivalve @iDonax vittatus@@ (da Costa) in experimental laboratory populations

Digital Repository Service at National Institute of Oceanography (India)

Ansell, A.D.; Sivadas, P.

The effect of temperature on the body weight and composition, and on respiration, filtration and NH, excretion of the bivalve Donax uittatus (da Costa) has been investigated in laboratory-maintained populations under conditions of starvation In all...

Mineralogical characteristics of the silica polymorphs in relation to their biological activities

Energy Technology Data Exchange (ETDEWEB)

Guthrie, G.D. Jr. [Los Alamos National Lab., NM (United States); Heaney, P.J. [Princeton Univ., NJ (United States). Dept. of Geological and Geophysical Sciences

1993-10-01

Numerous aspects of minerals (including the silica polymorphs) can effect their biological activities. These include periodic structures, compositional variations, dissolution characteristics, surface properties, and particle size/shape. In order to understand mineral-induced pathogenesis in a mechanistic way, the links between these properties and biochemical processes must be elucidated. This paper presents some of the basic properties of the silica polymorphs that may relate to pathogenicity and mineralogical strategies for designing biological assays to evaluate these properties.

Degradation characteristics of 2,4-dichlorophenoxyacetic acid in electro-biological system

Energy Technology Data Exchange (ETDEWEB)

Zhang, JingLi, E-mail: jinglizhangczp@126.com [Tianjin Key Laboratory of Aquatic Science and Technology, Tianjin Institute of Urban Construction, Tianjin 300384 (China); Cao, ZhanPing; Zhang, HongWei [School of Environmental and Chemical Engineering, Tianjin Polytechnic University, Tianjin 300387 (China); Zhao, LianMei [Tianjin Key Laboratory of Aquatic Science and Technology, Tianjin Institute of Urban Construction, Tianjin 300384 (China); Sun, XuDong; Mei, Feng [School of Environmental and Chemical Engineering, Tianjin Polytechnic University, Tianjin 300387 (China)

2013-11-15

Highlights: • The 2,4-D reductive degradation was studied in an electro-biological system. • The electric auxiliary accelerates 2,4-D microbial degradation. • A electron transfer is achieved between the electrode, bacteria and the pollutants. • The paper provides a promising way for the degradation of persistent organics. -- Abstract: The reductive degradation of 2,4-dichlorophenoxyacetic acid (2,4-D) was studied in an electro-biological system, a biological system and an electric catalytic system, respectively. Electrochemical characteristics were monitored by cyclic voltammetry and the intermediate products of 2,4-D degradation were determined by high speed liquid chromatography (HPLC). The results showed that all 2,4-D degradations in the three systems conformed to the kinetics characteristics of one-order reaction, and the degradation kinetics constants were 28.74 × 10{sup −2} h{sup −1}, 19.73 × 10{sup −2} h{sup −1} and 3.54 × 10{sup −2} h{sup −1}, respectively. The kinetics constant in the electro-biological system was higher than the sum in the other two systems by 19%. The electrochemical assistance provided the electrons and accelerated the electron transfer rate in the microbial degradation of 2,4-D. The degradation resulted from the microbial reduction strengthened by the electrochemical assistance. The electron transfer existed between the electrode, cytochrome, NAD and the pollutants. A long-range electron transfer process could be achieved on the multi-phase interfaces between the electrode, bacteria and the pollutants.

Uptake and metabolism of 14C-chloropyrifos by marine bivalves

International Nuclear Information System (INIS)

Zhong, C.G.; Chen, S.; Zhao, X.; Shi, J.; Carvalho, F.P.

1999-01-01

The uptake and metabolism of 14 C-chlorpyrifos by two marine bivalves, Paphia undulata and Sinonovacula constricta, were studied in a simulated ecosystem. The experiments were carried out in two 30 L glass tanks containing each 20 L of filtered sea water, contaminated with 14 C-chlorpyrifos 1.85x10 4 Bq.L -1 (16.7 μg.L -1 ) at the beginning of the exposure period. At different time intervals, three specimens of each species were sampled for analysis of the pesticide in the molluscs tissues. The 14 C-chlorpyrifos residues were extracted from the digestive gland of the molluscs and analyzed by co-chromatography with pesticide standards by TLC methods described before

Trace element determination in soft tissues of marine bivalves by activation analysis

International Nuclear Information System (INIS)

Fukushima, M.; Tamate, H.; Nakano, Y.

2003-01-01

Trace elements in soft tissues of marine bivalves were determined by neutron activation analysis (NAA) and photon activation analysis (PAA). Elemental levels of Ag, As, Br, Co, Cu, Fe, I, Mn, Ni, Rb, Se, and Zn in the organs of giant ezoscallos, rock oysters, and giant crams were obtained. The metal-bound proteins were extracted from the mantles and hepatopancreases of rock oysters. By irradiating the fraction obtained by HPLC gel chromatography, the possibility for the existence of an Ag bound protein in the mantles was found. (author)

Cephalic and limb anatomy of a new Isoxyid from the Burgess Shale and the role of "stem bivalved arthropods" in the disparity of the frontalmost appendage.

Directory of Open Access Journals (Sweden)

Cédric Aria

Full Text Available We herein describe Surusicaris elegans gen. et sp. nov. (in Isoxyidae, amended, a middle (Series 3, Stage 5 Cambrian bivalved arthropod from the new Burgess Shale deposit of Marble Canyon (Kootenay National Park, British Columbia. Surusicaris exhibits 12 simple, partly undivided biramous trunk limbs with long tripartite caeca, which may illustrate a plesiomorphic "fused" condition of exopod and endopod. We construe also that the head is made of five somites (= four segments, including two eyes, one pair of anomalocaridid-like frontalmost appendages, and three pairs of poorly sclerotized uniramous limbs. This fossil may therefore be a candidate for illustrating the origin of the plesiomorphic head condition in euarthropods, and questions the significance of the "two-segmented head" in, e.g., fuxianhuiids. The frontalmost appendage in isoxyids is intriguingly disparate, bearing similarities with both dinocaridids and euarthropods. In order to evaluate the relative importance of bivalved arthropods, such as Surusicaris, in the hypothetical structuro-functional transition between the dinocaridid frontal appendage and the pre-oral-arguably deutocerebral-appendage of euarthropods, we chose a phenetic approach and computed morphospace occupancy for the frontalmost appendages of 36 stem and crown taxa. Results show different levels of evolutionary decoupling between frontalmost appendage disparity and body plans. Variance is greatest in dinocaridids and "stem bivalved" arthropods, but these groups do not occupy the morphospace homogeneously. Rather, the diversity of frontalmost appendages in "stem bivalved" arthropods, distinct in its absence of clear clustering, is found to link the morphologies of "short great appendages," chelicerae and antennules. This find fits the hypothesis of an increase in disparity of the deutocerebral appendage prior to its diversification in euarthropods, and possibly corresponds to its original time of development. The

Cephalic and limb anatomy of a new Isoxyid from the Burgess Shale and the role of "stem bivalved arthropods" in the disparity of the frontalmost appendage.

Science.gov (United States)

Aria, Cédric; Caron, Jean-Bernard

2015-01-01

We herein describe Surusicaris elegans gen. et sp. nov. (in Isoxyidae, amended), a middle (Series 3, Stage 5) Cambrian bivalved arthropod from the new Burgess Shale deposit of Marble Canyon (Kootenay National Park, British Columbia). Surusicaris exhibits 12 simple, partly undivided biramous trunk limbs with long tripartite caeca, which may illustrate a plesiomorphic "fused" condition of exopod and endopod. We construe also that the head is made of five somites (= four segments), including two eyes, one pair of anomalocaridid-like frontalmost appendages, and three pairs of poorly sclerotized uniramous limbs. This fossil may therefore be a candidate for illustrating the origin of the plesiomorphic head condition in euarthropods, and questions the significance of the "two-segmented head" in, e.g., fuxianhuiids. The frontalmost appendage in isoxyids is intriguingly disparate, bearing similarities with both dinocaridids and euarthropods. In order to evaluate the relative importance of bivalved arthropods, such as Surusicaris, in the hypothetical structuro-functional transition between the dinocaridid frontal appendage and the pre-oral-arguably deutocerebral-appendage of euarthropods, we chose a phenetic approach and computed morphospace occupancy for the frontalmost appendages of 36 stem and crown taxa. Results show different levels of evolutionary decoupling between frontalmost appendage disparity and body plans. Variance is greatest in dinocaridids and "stem bivalved" arthropods, but these groups do not occupy the morphospace homogeneously. Rather, the diversity of frontalmost appendages in "stem bivalved" arthropods, distinct in its absence of clear clustering, is found to link the morphologies of "short great appendages," chelicerae and antennules. This find fits the hypothesis of an increase in disparity of the deutocerebral appendage prior to its diversification in euarthropods, and possibly corresponds to its original time of development. The analysis of this

Accumulation of butyl- and phenyltin compounds in starfish and bivalves from the coastal environment of Korea

Energy Technology Data Exchange (ETDEWEB)

Shim, Won Joon [Southern Coastal Environment Research Division, Korea Ocean Research and Development Institute, Jangmok-myon 391, Geoje 656-830 (Korea, Republic of)]. E-mail: wjshim@kordi.re.kr; Yim, Un Hyuk [Southern Coastal Environment Research Division, Korea Ocean Research and Development Institute, Jangmok-myon 391, Geoje 656-830 (Korea, Republic of); Kim, Nam Sook [Southern Coastal Environment Research Division, Korea Ocean Research and Development Institute, Jangmok-myon 391, Geoje 656-830 (Korea, Republic of); Hong, Sang Hee [Southern Coastal Environment Research Division, Korea Ocean Research and Development Institute, Jangmok-myon 391, Geoje 656-830 (Korea, Republic of); Oh, Jae Ryoung [Southern Coastal Environment Research Division, Korea Ocean Research and Development Institute, Jangmok-myon 391, Geoje 656-830 (Korea, Republic of); Jeon, Joong Kyun [Department of Marine Bioscience and Technology, Kangnung National University, Kangnung 210-702 (Korea, Republic of); Okamura, Hideo [Laboratory of Marine Environment Management, Kobe University Mercantile Marine, Fukaeminami 5-1-1, Highshinada, Kobe 658-0022 (Japan)

2005-02-01

Triphenyltin (TPT) and tributyltin (TBT) concentrations were determined in two starfish species (Asteria pectinifera and Asterias amurensis), bivalves (Crassostrea gigas or Mytilus edulis), and seawater samples from sites around the coasts of Korea. Both TPT and TBT concentrations in starfish ranged from 8 to 1560 ng/g and from <2 to 797 ng/g as Sn on a dry weight basis, respectively. TPT concentration accounted for 75.4% and 86.4% of total phenyltin concentration in A. pectinifera and A. amurensis, respectively, while monobutyltin, a degradation product of TBT, accounted for 86.3% and 57.2% of total butyltin, respectively. Triphenyltin concentrations in A. pectinifera were significantly correlated to water and bivalve TPT concentrations, which implies that dietary uptake of TPT from contaminated prey as well as direct uptake from surrounding water contribute to TPT body residues in the starfish. Starfish could be target organisms for monitoring TPT compound in the marine environment, due to their high accumulation and low degradation capacity towards TPT. - Starfish are effective organisms for monitoring phenyltin contamination in the marine environment.

Accumulation of butyl- and phenyltin compounds in starfish and bivalves from the coastal environment of Korea

International Nuclear Information System (INIS)

Shim, Won Joon; Yim, Un Hyuk; Kim, Nam Sook; Hong, Sang Hee; Oh, Jae Ryoung; Jeon, Joong Kyun; Okamura, Hideo

2005-01-01

Triphenyltin (TPT) and tributyltin (TBT) concentrations were determined in two starfish species (Asteria pectinifera and Asterias amurensis), bivalves (Crassostrea gigas or Mytilus edulis), and seawater samples from sites around the coasts of Korea. Both TPT and TBT concentrations in starfish ranged from 8 to 1560 ng/g and from <2 to 797 ng/g as Sn on a dry weight basis, respectively. TPT concentration accounted for 75.4% and 86.4% of total phenyltin concentration in A. pectinifera and A. amurensis, respectively, while monobutyltin, a degradation product of TBT, accounted for 86.3% and 57.2% of total butyltin, respectively. Triphenyltin concentrations in A. pectinifera were significantly correlated to water and bivalve TPT concentrations, which implies that dietary uptake of TPT from contaminated prey as well as direct uptake from surrounding water contribute to TPT body residues in the starfish. Starfish could be target organisms for monitoring TPT compound in the marine environment, due to their high accumulation and low degradation capacity towards TPT. - Starfish are effective organisms for monitoring phenyltin contamination in the marine environment

Assessing phototoxicity of petroleum using the bivalve Mulinia lateralis and the mysid Mysidopsis bahia

International Nuclear Information System (INIS)

Pelletier, M.; Champlin, D.; Burgess, R.; Ho, K.; Kuhn-Hines, A.

1995-01-01

One of the major inputs of PAHs in the marine environment is petroleum products. A large and often catastrophic source of petroleum is an oil spill, which releases concentrated quantities of PAHs into the water column. Intermediate molecular weight compounds remain in the water column for a relatively extended length of time. These compounds include phototoxic PAHs such as anthracene, fluoranthene, pyrene, and their substituted derivatives. Assessments of the environmental impact of marine oil spills have not included phototoxicity tests using pelagic larvae of benthic invertebrates. In this study, the photoreactive toxicity of individual PAHs, including anthracene, pyrene, and fluoranthene, were determined using the bivalve, Mulinia lateralis and the mysid, Mysidopsis bahia. Ultraviolet light exposures increased toxicity relative to fluorescent light for both species but a particularly dramatic response was seen using M. lateralis embryos. This species was relatively insensitive when exposed under fluorescent lights, but exhibited up to a 4,000 fold increase in toxicity under ultraviolet lights. Exposures with different types of petroleum (e.g., fuel oil number-sign 2 and crude oil) under fluorescent and ultraviolet light will demonstrate the utility of this bivalve and mysid for assessing oil spill-related acute and sublethal toxicity in the marine environment

Effect of low oxygen tension on the biological characteristics of human bone marrow mesenchymal stem cells

OpenAIRE

Kim, Dae Seong; Ko, Young Jong; Lee, Myoung Woo; Park, Hyun Jin; Park, Yoo Jin; Kim, Dong-Ik; Sung, Ki Woong; Koo, Hong Hoe; Yoo, Keon Hee

2016-01-01

Culture of mesenchymal stem cells (MSCs) under ambient conditions does not replicate the low oxygen environment of normal physiological or pathological states and can result in cellular impairment during culture. To overcome these limitations, we explored the effect of hypoxia (1 % O2) on the biological characteristics of MSCs over the course of different culture periods. The following biological characteristics were examined in human bone marrow-derived MSCs cultured under hypoxia for 8 week...

The quagga mussel (Dreissena rostriformis bugensis Andrusov, 1897) – another Ponto-Caspian dreissenid bivalve in the southern Baltic catchment: the first record from the Szczecin Lagoon

OpenAIRE

Adam Woźniczka; Brygida Wawrzyniak-Wydrowska; Teresa Radziejewska; Anna Skrzypacz

2016-01-01

In 2014, a non-indigenous dreissenid bivalve, the quagga mussel (Dreissena rostriformis bugensis Andrusov, 1897) was for the first time recorded in the Szczecin Lagoon. This was also the first record of the species in the Baltic Sea catchment. The quagga mussel was found to accompany the zebra mussel (Dreissena polymorpha), a non-indigenous bivalve already firmly established in the Lagoon. As indicated by the new immigrant's estimated abundance (4000.0 ± 355.44 ind. m−2) and the zebra mussel ...

Assessment of bioavailability of weathered oil residues using caged bivalves (Crassostrea gigas and Mytilus edulis) as indicator organisms

International Nuclear Information System (INIS)

Bleczinski, C.F.; Costa, H.J.; Rigatti, M.J.; Wong, M.C.; Boehm, P.D.

1993-01-01

In April 1988, an estimated 400,000 gallons of San Joaquin Valley crude oil spilled into Peyton Slough and subsequently into Suisun Bay from an oil refinery in Martinez, California. The crude oil initially impacted a number of ecologically sensitive environments including estuarine water, marsh grasses, marsh and shoreline sediment, and intertidal sediment. A four-year oil weathering study was performed to determine the concentrations of environmentally important compounds in the stranded oil, to monitor changes in these concentrations over time, and to assess the potential long-term impact of the spilled oil in these various environments. As a result of marked differences in the rate of weathering at the different sites, a bioaccumulation component was added to the original study design in order to assess the bioavailability of crude oil residues remaining four-years post spill. Caged bivalves (Crassostrea gigas and Mytilus edulis) were deployed at the three study sites as sentinel organisms and exposed for three months. Sediments and organism tissues were analyzed using gas chromatography/mass spectrometry for polynuclear aromatic hydrocarbon (PAH) assemblages characteristics of the spilled oil. Advanced hydrocarbon fingerprinting techniques (e.g., double ratio plots of characteristic alkyl PAHs) were used to match distributions in the organisms and in the study site sediments

Effect of low oxygen tension on the biological characteristics of human bone marrow mesenchymal stem cells.

Science.gov (United States)

Kim, Dae Seong; Ko, Young Jong; Lee, Myoung Woo; Park, Hyun Jin; Park, Yoo Jin; Kim, Dong-Ik; Sung, Ki Woong; Koo, Hong Hoe; Yoo, Keon Hee

2016-11-01

Culture of mesenchymal stem cells (MSCs) under ambient conditions does not replicate the low oxygen environment of normal physiological or pathological states and can result in cellular impairment during culture. To overcome these limitations, we explored the effect of hypoxia (1 % O 2 ) on the biological characteristics of MSCs over the course of different culture periods. The following biological characteristics were examined in human bone marrow-derived MSCs cultured under hypoxia for 8 weeks: proliferation rate, morphology, cell size, senescence, immunophenotypic characteristics, and the expression levels of stemness-associated factors and cytokine and chemokine genes. MSCs cultured under hypoxia for approximately 2 weeks showed increased proliferation and viability. During long-term culture, hypoxia delayed phenotypic changes in MSCs, such as increased cell volume, altered morphology, and the expression of senescence-associated-β-gal, without altering their characteristic immunophenotypic characteristics. Furthermore, hypoxia increased the expression of stemness and chemokine-related genes, including OCT4 and CXCR7, and did not decrease the expression of KLF4, C-MYC, CCL2, CXCL9, CXCL10, and CXCR4 compared with levels in cells cultured under normoxia. In conclusion, low oxygen tension improved the biological characteristics of MSCs during ex vivo expansion. These data suggest that hypoxic culture could be a useful method for increasing the efficacy of MSC cell therapies.

Biological and environmental characteristics of mangrove habitats from Manori creek, West Coast, India

Digital Repository Service at National Institute of Oceanography (India)

Kulkarni, V.A.; Jagtap, T.G.; Mhalsekar, N.M.; Naik, A.N.

better mangrove formations. A creek habitat had been evaluated for its biological and environmental characteristics, and is compared with similar but relatively lesser stressed Mandovi estuary (approx. 475 km south of Mumbai). Several evidences...

Soundscapes and Larval Settlement: Larval Bivalve Responses to Habitat-Associated Underwater Sounds.

Science.gov (United States)

Eggleston, David B; Lillis, Ashlee; Bohnenstiehl, DelWayne R

2016-01-01

We quantified the effects of habitat-associated sounds on the settlement response of two species of bivalves with contrasting habitat preferences: (1) Crassostrea virginicia (oyster), which prefers to settle on other oysters, and (2) Mercenaria mercenaria (clam), which settles on unstructured habitats. Oyster larval settlement in the laboratory was significantly higher when exposed to oyster reef sound compared with either off-reef or no-sound treatments. Clam larval settlement did not vary according to sound treatments. Similar to laboratory results, field experiments showed that oyster larval settlement in "larval housings" suspended above oyster reefs was significantly higher compared with off-reef sites.

An ecosystem-based approach and management framework for the integrated evaluation of bivalve aquaculture impacts

OpenAIRE

Cranford, Peter J.; Kamermans, Pauline; Krause, Gesche; Mazurie, Joseph; Buck, Bela H.; Dolmer, Per; Fraser, David; Van Nieuwenhove, Kris; O'Beirn, Francis X.; Sanchez-mata, Adoracion; Thorarinsdottir, Gudrun G.; Strand, Oivind

2012-01-01

An ecosystem-based approach to bivalve aquaculture management is a strategy for the integration of aquaculture within the wider ecosystem, including human aspects, in such a way that it promotes sustainable development, equity, and resilience of ecosystems. Given the linkage between social and ecological systems, marine regulators require an ecosystem-based decision framework that structures and integrates the relationships between these systems and facilitates communication of aquaculture–en...

Physicochemical Characteristics and Biological Activity of Irradiated Pectin Solution

International Nuclear Information System (INIS)

Kwon, J.H.; Kang, H.J.; Jo, C.O.; Jeong, I.Y.; Byun, M.W.

2005-01-01

Pectin was dissolved in HCI, citric acid, and deionized distilled water (DW, 2%, v/v) and irradiated at different irradiation doses (2.5-50 kGy) by gamma ray to investigate its physicochemical characteristics and biological activity. Viscosity of pectin solution was significantly decreased by irradiation up to 10 kGy, then remained constant thereafter. Gamma-irradiation increased monosaccharide and polysaccharide levels up to 30-40 kDa. Electron donating ability of pectin solution was highest when DW was added was increased by increasing irradiation dose (p less than 0.05)

Genetic variability of muscle biological characteristics of young limousin bulls

OpenAIRE

Renand, Gilles; Jurie, Catherine; Robelin, Jacques; Picard, Brigitte; Geay, Y.; Menissier, Francois

1995-01-01

Genetic parameters of 4 muscle biological characteristics (protein to DNA ratio (Pro/DNA), lactate dehydrogenase (LDH) activity, isocitrate dehydrogenase (ICDH) activity and the proportion of type I myosin heavy chains (MHC I)), in the Semitendinosus and the Longissimus thoracis, were estimated simultaneously with average daily gain (ADG), 480-d final weight (FW), carcass lean and fat contents (CL% and CF% respectively) in a sample of young Limousin bulls tested in station. The data came f...

Effects of space environment on biological characteristics of melanoma B16 cells

International Nuclear Information System (INIS)

Geng Chuanying; Xiang Qing; Xu Mei; Li Hongyan; Xu Bo; Fang Qing; Tang Jingtian; Guo Yupeng

2006-01-01

Objective: To examine the effects of space environment on biological characteristics of melanoma B16 Cells. Methods: B16 cells were carried to the space (in orbit for 8 days, circle the earth 286 times) by the 20th Chinese recoverable satellite, and then harvested and monocloned. 110 strains of space B16 cells were obtained in total. Ten strains of space B16 cells were selected and its morphological changes were examined with the phasecontrast microscope. Flow cytometry and MTT assay were carried out to evaluate the cell cycle and cell viability. Results Morphological changes were observed in the space cells, and melainin granules on the surface in some cells. It was demonstrated by MTF assay that space cells viability varied muti- directionally. It was showed by flow cytometry analysis that G1 phase of space cells was prolonged, S phase shortened. Conclusion: Space environment may change the biological characteristics of melanoma B16 cells. (authors)

Sensitivity of Mediterranean bivalve mollusc aquaculture to climate change, ocean acidification, and other environmental pressures: findings from a producers’ survey

NARCIS (Netherlands)

Rodrigues, L.; van den Bergh, J.C.J.M.; Mass, F.; Theodorou, J.A.; Ziveri, P.; Gazeau, F.

2015-01-01

Human-induced climate change and ocean acidification are global environmental phenomena with a common driver: anthropogenic emissions of carbon dioxide. Both processes potentially threaten the Mediterranean bivalve mollusc aquaculture sector, which is economically relevant to several regions and

Short-Term and Long-Term Biological Effects of Chronic Chemical Contamination on Natural Populations of a Marine Bivalve.

Directory of Open Access Journals (Sweden)

Marine Breitwieser

Full Text Available Understanding the effects of chronic chemical contamination on natural populations of marine organisms is complex due to the combined effects of different types of pollutants and environmental parameters that can modulate the physiological responses to stress. Here, we present the effects of a chronic contamination in a marine bivalve by combining multiple approaches that provide information on individual and population health. We sampled variegated scallops (Mimachlamys varia at sites characterized by different contaminants and contamination levels to study the short and long-term (intergenerational responses of this species to physiological stress. We used biomarkers (SOD, MDA, GST, laccase, citrate synthase and phosphatases as indicators of oxidative stress, immune system alteration, mitochondrial respiration and general metabolism, and measured population genetic diversity at each site. In parallel, concentration of 14 trace metals and 45 organic contaminants (PAHs, PCBs, pesticides in tissues were measured. Scallops were collected outside and during their reproductive season to investigate temporal variability in contaminant and biomarker levels. Our analyses revealed that the levels of two biomarkers (Laccase-type phenoloxidase and malondialdehyde were significantly correlated with Cd concentration. Additionally, we observed significant seasonal differences for four of the five biomarkers, which is likely due to the scallop reproductive status at time of sampling. As a source of concern, a location that was identified as a reference site on the basis of inorganic contaminant levels presented the same level of some persistent organic pollutants (DDT and its metabolites than more impacted sites. Finally, potential long-term effects of heavy metal contamination were observed for variegated scallops as genetic diversity was depressed in the most polluted sites.

Short-Term and Long-Term Biological Effects of Chronic Chemical Contamination on Natural Populations of a Marine Bivalve.

Science.gov (United States)

Breitwieser, Marine; Viricel, Amélia; Graber, Marianne; Murillo, Laurence; Becquet, Vanessa; Churlaud, Carine; Fruitier-Arnaudin, Ingrid; Huet, Valérie; Lacroix, Camille; Pante, Eric; Le Floch, Stéphane; Thomas-Guyon, Hélène

2016-01-01

Understanding the effects of chronic chemical contamination on natural populations of marine organisms is complex due to the combined effects of different types of pollutants and environmental parameters that can modulate the physiological responses to stress. Here, we present the effects of a chronic contamination in a marine bivalve by combining multiple approaches that provide information on individual and population health. We sampled variegated scallops (Mimachlamys varia) at sites characterized by different contaminants and contamination levels to study the short and long-term (intergenerational) responses of this species to physiological stress. We used biomarkers (SOD, MDA, GST, laccase, citrate synthase and phosphatases) as indicators of oxidative stress, immune system alteration, mitochondrial respiration and general metabolism, and measured population genetic diversity at each site. In parallel, concentration of 14 trace metals and 45 organic contaminants (PAHs, PCBs, pesticides) in tissues were measured. Scallops were collected outside and during their reproductive season to investigate temporal variability in contaminant and biomarker levels. Our analyses revealed that the levels of two biomarkers (Laccase-type phenoloxidase and malondialdehyde) were significantly correlated with Cd concentration. Additionally, we observed significant seasonal differences for four of the five biomarkers, which is likely due to the scallop reproductive status at time of sampling. As a source of concern, a location that was identified as a reference site on the basis of inorganic contaminant levels presented the same level of some persistent organic pollutants (DDT and its metabolites) than more impacted sites. Finally, potential long-term effects of heavy metal contamination were observed for variegated scallops as genetic diversity was depressed in the most polluted sites.

Carbon and nitrogen elemental and isotopic ratios of filter-feeding bivalves along the French coasts: An assessment of specific, geographic, seasonal and multi-decadal variations.

Science.gov (United States)

Briant, Nicolas; Savoye, Nicolas; Chouvelon, Tiphaine; David, Valérie; Rodriguez, Samuel; Charlier, Karine; Sonke, Jeroen E; Chiffoleau, Jean François; Brach-Papa, Christophe; Knoery, Joël

2018-02-01

Primary consumers play a key role in coastal ecosystems by transferring organic matter from primary producers to predators. Among them, suspension-feeders, like bivalve molluscs are widely used in trophic web studies. The main goal of this study was to investigate variations of C and N elemental and isotopic ratios in common bivalves (M. edulis, M. galloprovincialis, and C. gigas) at large spatial (i.e. among three coastal regions) and different temporal (i.e. from seasonal to multi-decadal) scales in France, in order to identify potential general or specific patterns and speculate on their drivers. The observed spatial variability was related to the trophic status of the coastal regions (oligotrophic Mediterranean Sea versus meso- to eutrophic English Channel and Atlantic ocean), but not to ecosystem typology (estuaries, versus lagoons versus bays versus littoral systems). Furthermore, it highlighted local specificities in terms of the origin of the POM assimilated by bivalves (e.g., mainly continental POM vs. marine phytoplankton vs. microphytobenthic algae). Likewise, seasonal variability was related both to the reproduction cycle for C/N ratios of Mytilus spp. and to changes in trophic resources for δ 13 C of species located close to river mouth. Multi-decadal evolution exhibited shifts and trends for part of the 30-year series with decreases in δ 13 C and δ 15 N. Specifically, shifts appeared in the early 2000's, likely linking bivalve isotopic ratios to a cascade of processes affected by local drivers. Copyright © 2017 Elsevier B.V. All rights reserved.

Influence of a step-change in metal exposure (Cd, Cu, Zn) on metal accumulation and subcellular partitioning in a freshwater bivalve, Pyganodon grandis: A long-term transplantation experiment between lakes with contrasting ambient metal levels

Energy Technology Data Exchange (ETDEWEB)

Cooper, Sophie [INRS-Eau, Terre et Environnement, Université du Québec, 490 de la Couronne, Québec, QC G1K 9A9 (Canada); Bonneris, Emmanuelle [INRS-Eau, Terre et Environnement, Université du Québec, 490 de la Couronne, Québec, QC G1K 9A9 (Canada) and Bayer S.A.S., Bayer CropScience, 16 Rue Jean-Marie Leclair, CP 90106, F 69266 Lyon Cedex 09 (France); Michaud, Annick [INRS-Eau, Terre et Environnement, Université du Québec, 490 de la Couronne, Québec, QC G1K 9A9 (Canada) and Direction des Évaluations environnementales, Ministère du Développement durable, de l’Environnement et des Parcs, 675, boul. René-Lévesque Est, 6e étage, Québec, QC G1R 5V7 (Canada); Pinel-Alloul, Bernadette [Groupe de Recherche Interuniversitaire en Limnologie et Environnement Aquatique (GRIL), Département de Sciences Biologiques, Université de Montréal, C.P. 6128, Montréal, QC H3C 3J7 (Canada); Campbell, Peter G.C., E-mail: peter.campbell@ete.inrs.ca [INRS-Eau, Terre et Environnement, Université du Québec, 490 de la Couronne, Québec, QC G1K 9A9 (Canada)

2013-05-15

Highlights: ? We transferred freshwater bivalves from a reference lake to a Cd and Zn contaminated lake. ? Changes in metal accumulation and subcellular partitioning were followed over time (up to 860 d). ? Metal detoxification strategies differed between target organs (gills vs. digestive gland). ? The ability to handle Cd is inherent in P. grandis, not a trait acquired after long-term adaptation. -- Abstract: The objective of the present field experiment was to identify detoxification responses in the gills and digestive gland of a freshwater unionid bivalve, Pyganodon grandis, subjected to a step-change in metal exposure. Adult bivalves were transferred from a reference site (Lake Opasatica) and a metal-contaminated lake (Lake Héva) to a second contaminated lake (Lake Vaudray) in northwestern Quebec, Canada. Changes in organ metal concentrations, in the subcellular distribution of metals and in metallothionein concentrations were followed over time (t = 0, 132, (400) and 860 days). At each collection time and for each bivalve, the gills and digestive gland were excised and gently homogenized; six sub-cellular fractions were separated by differential centrifugation and analyzed for their Cd, Cu and Zn content, and metallothionein was quantified independently. Metal detoxification strategies were shown to differ between target organs: in the gills, incoming metals were sequestered largely in the granules, whereas in the digestive gland the same metals primarily accumulated in the cytosol, in the metallothionein-like protein fraction. These metal-handling strategies, as employed by the metal-naïve bivalves originating in the reference lake, closely resemble those identified in free-living P. grandis chronically exposed in the metal-contaminated lake, suggesting that the ability to handle incoming metals (Cd in particular) is inherent in P. grandis and is not a trait acquired after long-term adaptation of the bivalve to metal-contaminated environments. The

Subcellular compartmentalization of Cd and Zn in two bivalves. II. Significance of trophically available metal (TAM)

Science.gov (United States)

Wallace, W.G.; Luoma, S.N.

2003-01-01

This paper examines how the subcellular partitioning of Cd and Zn in the bivalves Macoma balthica and Potamocorbula amurensis may affect the trophic transfer of metal to predators. Results show that the partitioning of metals to organelles, 'enzymes' and metallothioneins (MT) comprise a subcellular compartment containing trophically available metal (TAM; i.e. metal trophically available to predators), and that because this partitioning varies with species, animal size and metal, TAM is similarly influenced. Clams from San Francisco Bay, California, were exposed for 14 d to 3.5 ??g 1-1 Cd and 20.5 ??g 1-1 Zn, including 109Cd and 65Zn as radiotracers, and were used in feeding experiments with grass shrimp Palaemon macrodatylus, or used to investigate the subcellular partitioning of metal. Grass shrimp fed Cd-contaminated P. amurensis absorbed ???60% of ingested Cd, which was in accordance with the partitioning of Cd to the bivalve's TAM compartment (i.e. Cd associated with organelles, 'enzymes' and MT); a similar relationship was found in previous studies with grass shrimp fed Cd-contaminated oligochaetes. Thus, TAM may be used as a tool to predict the trophic transfer of at least Cd. Subcellular fractionation revealed that ???34% of both the Cd and Zn accumulated by M. balthica was associated with TAM, while partitioning to TAM in P. amurensis was metal-dependent (???60% for TAM-Cd%, ???73% for TAM-Zn%). The greater TAM-Cd% of P. amurensis than M. balthica is due to preferential binding of Cd to MT and 'enzymes', while enhanced TAM-Zn% of P. amurensis results from a greater binding of Zn to organelles. TAM for most species-metal combinations was size-dependent, decreasing with increased clam size. Based on field data, it is estimated that of the 2 bivalves, P. amurensis poses the greater threat of Cd exposure to predators because of higher tissue concentrations and greater partitioning as TAM; exposure of Zn to predators would be similar between these species.

Using transplanted bivalves to assess oil exposure and effects in Delaware Bay

International Nuclear Information System (INIS)

Salazar, M.; Salazar, S.; Mearns, A.; Venosa, A.; Eberhart, B.

1995-01-01

To evaluate the effectiveness of bioremediation, the US EPA oiled intertidal plots in Delaware Bay and monitored oil degradation rates. This controlled release of oil was also used to test the utility of transplanted bivalves in assessing oil spills and to evaluate the extent and potential effects of the release. Measuring the accumulation of oil in bivalve tissues was used to estimate exposure and the extent of contamination. Growth was used to estimate potential bioeffects. Approximately 1,800 mussels and 1,200 oysters were transplanted to 11 intertidal sites. Five treatment sites were within 1 meter of the lower end of the oiled plots. A total of six sites were used as controls, three on either side of the oiled plots at 5, 10, and 100 m. Samples were taken on Day 0, 2, 15, and 28 to estimate the rate of bioaccumulation. All of the mussels died within the first week of exposure; oysters exhibited over 95% survival but growth was minimal. The authors found a statistically significant difference in tissue weights when comparing treatment sites with control sites. The total concentration of polynuclear aromatic hydrocarbons (PAHs) in tissues of oysters nearest the oiled plots increased by a factor of four after an exposure period of two days. PAH concentrations in control oysters nearest the mouth of the bay increased slightly but the differences were not statistically significant. The control oysters nearest the head of the bay received an intermediate dose which was depurated by the end of the 28-day experiment. PAHs in the oysters nearest the oiled plots approached but did not return to background levels by the end of the test

Macroscopic Biological Characteristics of Individualized Therapy in Chinese Mongolian Osteopathy

Science.gov (United States)

Namula, Zhao; Mei, Wang; Li, Xue-en

Objective: Chinese Mongolian osteopathy has been passed down from ancient times and includes unique practices and favorable efficacy. In this study, we investigate the macroscopic biological characteristics of individualized Chinese Mongolian osteopathy, in order to provide new principle and methods for the treatment of bone fracture. Method: With a view to provide a vital link between nature and humans, the four stages of Chinese Mongolian osteopathy focus on the unity of the mind and body, the limbs and body organs, the body and its functions, and humans and nature. Results: We discuss the merits of individualized osteopathy in terms of the underlying concepts, and evaluate the approaches and principles of traditional medicine, as well as biomechanics. Conclusions: Individualized Mongolian osteopathy targets macroscopic biological components including dynamic reduction, natural fixation, and functional healing. Chinese Mongolian osteopathy is a natural, ecological and non-invasive osteopathy that values the link between nature and humans, including the unity of mind and body. The biological components not only serve as a foundation for Chinese Mongolian osteopathy but are also important for the future development of modern osteopathy, focusing on individualization, actualization and integration.

Occurrence of potentially pathogenic Vibrio in oysters (Crassostrea gigas) and waters from bivalve mollusk cultivations in the South Bay of Santa Catarina.

Science.gov (United States)

Ramos, Roberta Juliano; Miotto, Letícia Adélia; Miotto, Marília; Silveira Junior, Nelson; Cirolini, Andréia; Silva, Helen Silvestre da; Rodrigues, Dália dos Prazeres; Vieira, Cleide Rosana Werneck

2014-01-01

This research aimed to identify and quantify potentially pathogenic Vibrio from different cultivations of bivalve shellfish in the State of Santa Catarina, Brazil, and water regions in the South Bay, as well as correlate the incidence of these microorganisms with the physicochemical parameters of marine waters. Between October 2008 and March 2009, 60 oyster and seawater samples were collected from six regions of bivalve mollusk cultivation, and these samples were submitted for Vibrio counts. Twenty-nine (48.3%) oyster samples were revealed to be contaminated with one or more Vibrio species. The Vibrio parahaemolyticus and Vibrio vulnificus counts in the samples ranged from oyster and from oyster, respectively. Of the 60 seawater samples analyzed, 44 (73.3%) showed signs of contamination with one or more vibrio species. The counts of V. parahaemolyticus and V. vulnificus in the samples ranged from < 0.3 log10 MPN·100mL(-1) to 1.7 log10MPN·100mL(-1) seawater and from < 0.3 log10 MPN·100mL(-1) to 2.0 log10 MPN·100mL(-1) seawater, respectively. A positive correlation between V. vulnificus counts and the seawater temperature as well as a negative correlation between the V. parahaemolyticus counts and salinity were observed. The results suggest the need to implement strategies to prevent vibrio diseases from being transmitted by the consumption of contaminated bivalve shellfish.

Respiration of bivalves from three different deep-sea areas: Cold seeps, hydrothermal vents and organic carbon-rich sediments

Science.gov (United States)

Khripounoff, A.; Caprais, J. C.; Decker, C.; Le Bruchec, J.; Noel, P.; Husson, B.

2017-08-01

We studied bivalves (vesicomyids and mytilids) inhabiting four different areas of high sulfide and methane production: (1) in the Gulf of Guinea, two pockmarks (650 m and 3150 m depth) and one site rich in organic sediments in the deepest zone (4950 m average depth), (2) at the Azores Triple Junction on the Mid-Atlantic Ridge, one hydrothermal site (Lucky Strike vent field, 1700 m depth). Two types of Calmar benthic chambers were deployed, either directly set into the sediment (standard Calmar chamber) or fitted with a tank to isolate organisms from the sediment (modified Calmar chamber), to assess gas and solute exchanges in relation to bivalve bed metabolism. Fluxes of oxygen, total carbon dioxide, ammonium and methane were measured. At the site with organic-rich sediments, oxygen consumption by clams measured in situ with the standard benthic chamber was variable (1.3-6.7 mmol m-2 h-1) as was total carbon dioxide production (1-9.6 mmol m-2 h-1). The observed gas and solute fluxes were attributed primarily to bivalve respiration (vesicomyids or mytilids), but microbial and geochemical processes in the sediment may be also responsible for some of variations in the deepest stations. The respiration rate of isolated vesicomyids (16.1-0.25.7 μmol g-1 dry weight h-1) was always lower than that of mytilids (33 μmol g-1 dry weight h-1). This difference was attributed to the presence of a commensal scaleworm in the mytilids. The respiratory coefficient (QR) ≥1 indicated high levels of anaerobic metabolism. The O:N index ranged from 5 to 25, confirming that vesicomyids and mytilids, living in symbiosis with bacteria, have a protein-based food diet.

Estimation of food limitation of bivalve larvae in coastal waters of north-western Europe

DEFF Research Database (Denmark)

Bos, O.G.; Hendriks, I.E.; Strasser, M.

2006-01-01

Marine invertebrate recruitment may be affected by food limitation during the pelagic larval life stages. In the present study, field data on abundance of bivalve larvae along with their prey (small phytoplankton) were examined to see whether they were consistent with predictions made...... assimilation rate averaged 7-26% of the maximum assimilation rate. Under the assumptions made for the present study, it is suggested that growth of larvae in north-west European waters is often food-limited. (c) 2005 Elsevier B.V. All rights reserved...

PAH assessment in the main Brazilian offshore oil and gas production area using semi-permeable membrane devices (SPMD) and transplanted bivalves

Science.gov (United States)

André Lourenço, Rafael; Francisco de Oliveira, Fábio; Haddad Nudi, Adriana; Rebello Wagener, Ângela de Luca; Guadalupe Meniconi, Maria de Fátima; Francioni, Eleine

2015-06-01

The Campos Basin is Brazil's main oil and gas production area. In 2013, more than 50 million cubic meters of produced water (PW) was discharged into these offshore waters. Despite the large volumes of PW that are discharged in the Campos Basin each day, the ecological concern of the chemicals in the PW are not completely understood. Polycyclic aromatic hydrocarbons (PAH) are the most important contributors to the ecological hazards that are posed by discharged PW. This study aimed to evaluate the potential bioaccumulation of PAH using transplanted bivalves (Nodipecten nodosus) and semi-permeable membrane devices (SPMD). The study was conducted in two platforms that discharge PW (P19 and P40). Another platform that does not discharge PW (P25) was investigated for comparison with the obtained results. Time-integrated hydrocarbon concentrations using SPMD and transplanted bivalves were estimated from the seawater near the three platforms. The bioaccumulation of the PAH in the transplanted bivalves at platforms P19 and P40 were up to fivefold greater than the bioaccumulation of the PAH at platform P25. The lowest PAH concentrations were estimated for platform P25 (4.3-6.2 ng L-1), and the highest PAH concentrations were estimated for platform P19 (9.2-37.3 ng L-1). Both techniques were effective for determining the bioavailability of the PAH and for providing time-integrated hydrocarbon concentrations regarding oil and gas production activities.

Alkylphenols and polycyclic aromatic hydrocarbons in bivalves from Comunidad Valenciana coastal waters; Alquilfenoles e hidrocarburos aromaticos policiclicos en bivalvos de las coastas de la comunidad Valenciana

Energy Technology Data Exchange (ETDEWEB)

Marti Ortega, N.; Aguado Garcia, D.; Bouzas Blanco, A.; Segovia Martinez, L.; Albargues Llamas, M.; Sevillano Cabeza, A.; Campins Falco, P.; Seco Torrecillas, A.; Ferrer Polo, J.

2009-07-01

This paper reports the results on alkylphenol and polycyclic aromatic hydrocarbons (PAH) pollution in mussels and cleans from Comunidad Valenciana coastal waters, in 2008. The significant presence of nonylphenol observed in both bivalves reflects an exposure to alkyl phenolic surfactants from the discharges of wastewater treatment plants that treat industrial and urban wastewaters, where the presence of alkylphenol polyethoxylated is common due to its extensive use (detergents, solubilizers...). The presence of low levels of PAH was observed in most of the studied areas. However, it must be highlighted that bivalves consumption does not imply any risk for human health. (Author) 21 refs.

Bioaccumulation of selected metals in bivalves (Unionidae) and Phragmites australis inhabiting a municipal water reservoir

OpenAIRE

Rzymski, Piotr; Niedzielski, Przemysław; Klimaszyk, Piotr; Poniedziałek, Barbara

2014-01-01

Urbanization can considerably affect water reservoirs by, inter alia, input, and accumulation of contaminants including metals. Located in the course of River Cybina, Maltański Reservoir (Western Poland) is an artificial shallow water body built for recreation and sport purposes which undergoes restoration treatment (drainage) every 4 years. In the present study, we demonstrate an accumulation of nine metals (Cd, Co, Cr, Cu, Fe, Mn, Ni, Pb, Zn) in water, sediment, three bivalve species (Anodo...

Source and impact of lead contamination on {delta}-aminolevulinic acid dehydratase activity in several marine bivalve species along the Gulf of Cadiz

Energy Technology Data Exchange (ETDEWEB)

Company, R.; Serafim, A.; Lopes, B.; Cravo, A. [CIMA, University of Algarve, Campus de Gambelas, 8005-139 Faro (Portugal); Kalman, J.; Riba, I.; DelValls, T.A. [Catedra UNESCO/UNITWIN/WiCop, Department of Physical-Chemistry, Faculty Marine and Environmental Sciences, University of Cadiz, 11510 Puerto Real, Cadiz (Spain); Blasco, J. [Instituto Ciencias Marinas Andalucia (CSIC), Campus Rio San Pedro, 11510 Puerto Real, Cadiz (Spain); Delgado, J. [Department of Geology, University of Huelva, Avda Fuerzas Armadas s/n, 21071 Huelva (Spain); Sarmiento, A.M. [Catedra UNESCO/UNITWIN/WiCop, Department of Physical-Chemistry, Faculty Marine and Environmental Sciences, University of Cadiz, 11510 Puerto Real, Cadiz (Spain); Department of Geology, University of Huelva, Avda Fuerzas Armadas s/n, 21071 Huelva (Spain); Nieto, J.M. [Department of Geology, University of Huelva, Avda Fuerzas Armadas s/n, 21071 Huelva (Spain); Shepherd, T.J.; Nowell, G. [Department of Earth Sciences, University of Durham, Science Laboratories, Durham DH1 3LE (United Kingdom); Bebianno, M.J., E-mail: mbebian@ualg.pt [CIMA, University of Algarve, Campus de Gambelas, 8005-139 Faro (Portugal)

2011-01-17

Coastal areas and estuaries are particularly sensitive to metal contamination from anthropogenic sources and in the last few decades the study of space-time distribution and variation of metals has been extensively researched. The Gulf of Cadiz is no exception, with several rivers draining one of the largest concentrations of sulphide deposits in the world, the Iberian Pyrite Belt (IPB). Of these rivers, the Guadiana, one of the most important in the Iberian Peninsula, together with smaller rivers like the Tinto and Odiel, delivers a very high metal load to the adjacent coastal areas. The purpose of this work was to study the source and impact of lead (Pb) drained from historical or active mining areas in the IPB on the activity of a Pb inhibited enzyme ({delta}-aminolevulinic acid dehydratase, ALAD) in several bivalve species along the Gulf of Cadiz. Seven marine species (Chamelea gallina, Mactra corallina, Donax trunculus, Cerastoderma edule, Mytilus galloprovincialis, Scrobicularia plana and Crassostrea angulata) were collected at 12 sites from Mazagon, near the mouth of the rivers Tinto and Odiel (Spain), to Cacela Velha (Ria Formosa lagoon system, Portugal). Lead concentrations, ALAD activity and lead isotope ratios ({sup 206}Pb/{sup 204}Pb, {sup 207}Pb/{sup 204}Pb and {sup 208}Pb/{sup 204}Pb) were determined in the whole soft tissues. The highest Pb concentrations were determined in S. plana (3.50 {+-} 1.09 {mu}g g{sup -1} Pb d.w.) and D. trunculus (1.95 {+-} 0.10 {mu}g g{sup -1} Pb d.w.), while M. galloprovincialis and C. angulata showed the lowest Pb levels (<0.38 {mu}g g{sup -1} Pb d.w.). In general, ALAD activity is negatively correlated with total Pb concentration. However this relationship is species dependent (e.g. linear for C. gallina ALAD = -0.36[Pb] + 0.79; r = 0.837; or exponential for M. galloprovincialis ALAD = 2.48e{sup -8.3[Pb]}; r = 0.911). This indicates that ALAD activity has considerable potential as a biomarker of Pb and moreover, in

Source and impact of lead contamination on δ-aminolevulinic acid dehydratase activity in several marine bivalve species along the Gulf of Cadiz

International Nuclear Information System (INIS)

Company, R.; Serafim, A.; Lopes, B.; Cravo, A.; Kalman, J.; Riba, I.; DelValls, T.A.; Blasco, J.; Delgado, J.; Sarmiento, A.M.; Nieto, J.M.; Shepherd, T.J.; Nowell, G.; Bebianno, M.J.

2011-01-01

Coastal areas and estuaries are particularly sensitive to metal contamination from anthropogenic sources and in the last few decades the study of space-time distribution and variation of metals has been extensively researched. The Gulf of Cadiz is no exception, with several rivers draining one of the largest concentrations of sulphide deposits in the world, the Iberian Pyrite Belt (IPB). Of these rivers, the Guadiana, one of the most important in the Iberian Peninsula, together with smaller rivers like the Tinto and Odiel, delivers a very high metal load to the adjacent coastal areas. The purpose of this work was to study the source and impact of lead (Pb) drained from historical or active mining areas in the IPB on the activity of a Pb inhibited enzyme (δ-aminolevulinic acid dehydratase, ALAD) in several bivalve species along the Gulf of Cadiz. Seven marine species (Chamelea gallina, Mactra corallina, Donax trunculus, Cerastoderma edule, Mytilus galloprovincialis, Scrobicularia plana and Crassostrea angulata) were collected at 12 sites from Mazagon, near the mouth of the rivers Tinto and Odiel (Spain), to Cacela Velha (Ria Formosa lagoon system, Portugal). Lead concentrations, ALAD activity and lead isotope ratios ( 206 Pb/ 204 Pb, 207 Pb/ 204 Pb and 208 Pb/ 204 Pb) were determined in the whole soft tissues. The highest Pb concentrations were determined in S. plana (3.50 ± 1.09 μg g -1 Pb d.w.) and D. trunculus (1.95 ± 0.10 μg g -1 Pb d.w.), while M. galloprovincialis and C. angulata showed the lowest Pb levels ( -1 Pb d.w.). In general, ALAD activity is negatively correlated with total Pb concentration. However this relationship is species dependent (e.g. linear for C. gallina ALAD = -0.36[Pb] + 0.79; r = 0.837; or exponential for M. galloprovincialis ALAD = 2.48e -8.3[Pb] ; r = 0.911). This indicates that ALAD activity has considerable potential as a biomarker of Pb and moreover, in marine bivalve species with different feeding habits. Lead isotope data

Effect of chronic selenium exposure on the freshwater bivalve Corbicula fluminea

Energy Technology Data Exchange (ETDEWEB)

Fournier, E.; Adam, C.; Massabuau, J.C.; Garnier-Laplace, J. [CEA Cadarache (DEI/SECRE/LRE), Laboratory of Radioecology and Ecotoxicology, Institute for Radioprotection and Nuclear Safety, 13 - Saint-Paul-lez-Durance (France)

2004-07-01

Selenium is essential for most of living organisms. In oxic to moderately oxic fresh-waters, Se exists predominantly in the (+VI) and (+IV) oxidation states as selenate (SeO{sub 4}{sup 2-}) and selenite (SeO{sub 3}{sup 2-}) respectively, whereas in the biota it is incorporated as Se(-II) into seleno-proteins or amino-acids, or as elemental selenium Se(0). At low concentrations, it acts against oxidative damages mainly as the glutathione peroxidase seleno-dependant, but it may be toxic at higher levels (for example, by replacing sulphur in important biomolecules). In filter feeders, such as the freshwater bivalve Corbicula fluminea, selected as biological model, the ventilation activity is a primary limiting step that controls the water influx and therefore the delivery of contaminants. Consequently, a series of short-term experiments were performed to study the effects of different dissolved Se concentrations and forms (selenite; selenate; selenomethionine) on the ventilation activity of Corbicula fluminea and Se tissular distribution. The modification of the ventilation activity of the Se-exposed groups, in comparison to this of reference groups (not exposed to Se) varied greatly according to the form and the concentrations of the Se used. Se concentrations in tissues indicated that selenite was the less bioavailable form whereas selenomethionine displayed the opposite trend. On the basis of this set of experiments, a limited number of conditions have been selected to provide highly contrasting ventilation flow rates and selenium bioaccumulation levels, in order to study the effects of long term exposures, i) at the molecular level, by measuring bio-markers of oxidative stress (forms of glutathione, glutathione peroxidase, glutathione reductase, superoxide dismutase, catalase, and bio-marker of genotoxicity (comet assay), ii) at the (sub)cellular level by analysing Se micro-localisation in target organs and iii) at the individual level by monitoring the variation

Non-ionizing radiations : physical characteristics, biological effects and health hazard assessment

International Nuclear Information System (INIS)

Repacholi, M.H.

1988-01-01

The Workshop was a project of the International Non-Ionizing Radiation Committee of IRPA and comprised a series of educational lectures and demonstrations intended to give a comprehensive overview of non-ionizing electromagnetic radiation: physical characteristics, sources of concern, levels of exposure, mechanisms of interaction and reported effects of these fields and radiations with biological tissues, human studies, health risk assessment, national and international standards and guidelines, and protective measures

A critical examination of the possible application of zinc stable isotope ratios in bivalve mollusks and suspended particulate matter to trace zinc pollution in a tropical estuary.

Science.gov (United States)

Araújo, Daniel; Machado, Wilson; Weiss, Dominik; Mulholland, Daniel S; Boaventura, Geraldo R; Viers, Jerome; Garnier, Jeremie; Dantas, Elton L; Babinski, Marly

2017-07-01

The application of zinc (Zn) isotopes in bivalve tissues to identify zinc sources in estuaries was critically assessed. We determined the zinc isotope composition of mollusks (Crassostrea brasiliana and Perna perna) and suspended particulate matter (SPM) in a tropical estuary (Sepetiba Bay, Brazil) historically impacted by metallurgical activities. The zinc isotope systematics of the SPM was in line with mixing of zinc derived from fluvial material and from metallurgical activities. In contrast, source mixing alone cannot account for the isotope ratios observed in the bivalves, which are significantly lighter in the contaminated metallurgical zone (δ 66 Zn JMC  = +0.49 ± 0.06‰, 2σ, n = 3) compared to sampling locations outside (δ 66 Zn JMC  = +0.83 ± 0.10‰, 2σ, n = 22). This observation suggests that additional factors such as speciation, bioavailability and bioaccumulation pathways (via solution or particulate matter) influence the zinc isotope composition of bivalves. Copyright © 2017 Elsevier Ltd. All rights reserved.

Preliminary Results on the Evaluation of the Occurrence of Tetrodotoxin Associated to Marine Vibrio spp. in Bivalves from the Galician Rias (Northwest of Spain

Directory of Open Access Journals (Sweden)

Jose Manuel Leão

2018-03-01

Full Text Available Tetrodotoxins (TTX are a potent group of natural neurotoxins putatively produced by symbiotic microorganisms and affecting the aquatic environment. These neurotoxins have been recently found in some species of bivalves and gastropods along the European Coasts (Greece, UK, and The Netherlands linked to the presence of high concentrations of Vibrio, in particular Vibrio parahaemolyticus. This study is focused on the evaluation of the presence of Vibrio species and TTX in bivalves (mussels, oysters, cockles, clams, scallops, and razor clams from Galician Rias (northwest of Spain. The detection and isolation of the major Vibrio spp. and other enterobacterial populations have been carried out with the aim of screening for the presence of the pathways genes, poliketide synthase (PKS and non-ribosomal peptide synthetase (NRPS possibly involved in the biosynthesis of these toxins. Samples containing Vibrio spp. were analyzed by biochemical (API20E-galery and genetic tests (PCR-RT. These samples were then screened for TTX toxicity by a neuroblastoma cell-based assay (N2a and the presence of TTX was further confirmed by LC-MS/MS. TTX was detected in two infaunal samples. This is the first confirmation of the presence of TTX in bivalve molluscs from the Galician Rias.

Traces (ichnospecies Oichnus paraboloides of predatory gastropods on bivalve shells from the Seogwipo Formation, Jejudo, Korea

Directory of Open Access Journals (Sweden)

Dal-Yong Kong

2015-12-01

Full Text Available Circular to subcircular drill holes were identified on the bivalve shells collected from the Seogwipo Formation, Jejudo, Korea. A great majority of the drill holes (>70% were found on the surfaces of a bivalve species Glycymeris rotunda. They are characterized by a beveled sharp edge and paraboloid in cross section with larger outer borehole diameter (OBD; mean 4.21 mm and smaller inner borehole diameter (mean 2.94 mm. Walls of the drill holes are generally smooth, and walls ornamented with etched relief-like structures were also recognized. A slightly raised central boss observed in an incomplete specimen may indicate a failure of predator’s attack. All drill holes collected are classified as a single ichnospecies Oichnus paraboloides Bromley, 1981. They are interpreted as boring traces produced by predatory gastropods, particularly naticid gastropods. Most O. paraboloides boreholes are observed in the central area of shell surfaces; a few boreholes lie marginally, which may reflect a borehole-site selectivity. No correlation between size of prey (shell height and size of predator (OBD is recognized. It is likely, however, that drilled shells of about 30 mm in height represent optimal prey size for naticid predators that lived in a benthic Seogwipo community.

Immunotoxicity of nanoparticle nTiO2 to a commercial marine bivalve species, Tegillarca granosa.

Science.gov (United States)

Shi, Wei; Han, Yu; Guo, Cheng; Zhao, Xinguo; Liu, Saixi; Su, Wenhao; Zha, Shanjie; Wang, Yichen; Liu, Guangxu

2017-07-01

The increasing production and extensive application of nanoparticles (NPs) inevitably leads to increased release of NPs into the marine environment and therefore poses a potential threat to marine organisms, especially the sessile benthic bivalves. However, the impacts of NPs on the immunity of commercial and ecological important bivalve species, Tegillarca granosa, still remain unknown to date. In addition, the molecular mechanism of the immunotoxicity of NPs still remains unclear in marine invertebrates. Therefore, the immunotoxicity of nTiO 2 exposure to T. granosa at environmental realistic concentrations was investigated in the present study. Results obtained showed that the total number, phagocytic activity, and red granulocytes ratio of the haemocytes were significantly reduced after 30 days nTiO 2 exposures at the concentrations of 10 and 100 μg/L. Furthermore, the expressions of genes encoding Pattern Recognition Receptors (PPRs) and downstream immune-related molecules were significantly down-regulated by nTiO 2 exposures, indicating a reduced sensitivity to pathogen challenges. In conclusion, evident immunotoxicity of nTiO 2 to T. granosa at environmental realistic concentrations was detected by the present study. In addition, the gene expression analysis suggests that the PRRs (both TLRs and RIG1 investigated) may be the molecules for NPs recognition in marine invertebrates. Copyright © 2017 Elsevier Ltd. All rights reserved.

Gene expression and physiological changes of different populations of the long-lived bivalve Arctica islandica under low oxygen conditions.

Directory of Open Access Journals (Sweden)

Eva E R Philipp

Full Text Available The bivalve Arctica islandica is extremely long lived (>400 years and can tolerate long periods of hypoxia and anoxia. European populations differ in maximum life spans (MLSP from 40 years in the Baltic to >400 years around Iceland. Characteristic behavior of A. islandica involves phases of metabolic rate depression (MRD during which the animals burry into the sediment for several days. During these phases the shell water oxygen concentrations reaches hypoxic to anoxic levels, which possibly support the long life span of some populations. We investigated gene regulation in A. islandica from a long-lived (MLSP 150 years German Bight population and the short-lived Baltic Sea population, experimentally exposed to different oxygen levels. A new A. islandica transcriptome enabled the identification of genes important during hypoxia/anoxia events and, more generally, gene mining for putative stress response and (anti- aging genes. Expression changes of a antioxidant defense: Catalase, Glutathione peroxidase, manganese and copper-zinc Superoxide dismutase; b oxygen sensing and general stress response: Hypoxia inducible factor alpha, Prolyl hydroxylase and Heat-shock protein 70; and c anaerobic capacity: Malate dehydrogenase and Octopine dehydrogenase, related transcripts were investigated. Exposed to low oxygen, German Bight individuals suppressed transcription of all investigated genes, whereas Baltic Sea bivalves enhanced gene transcription under anoxic incubation (0 kPa and, further, decreased these transcription levels again during 6 h of re-oxygenation. Hypoxic and anoxic exposure and subsequent re-oxygenation in Baltic Sea animals did not lead to increased protein oxidation or induction of apoptosis, emphasizing considerable hypoxia/re-oxygenation tolerance in this species. The data suggest that the energy saving effect of MRD may not be an attribute of Baltic Sea A. islandica chronically exposed to high environmental variability (oxygenation

Transgenerational exposure of North Atlantic bivalves to ocean acidification renders offspring more vulnerable to low pH and additional stressors.

Science.gov (United States)

Griffith, Andrew W; Gobler, Christopher J

2017-09-12

While early life-stage marine bivalves are vulnerable to ocean acidification, effects over successive generations are poorly characterized. The objective of this work was to assess the transgenerational effects of ocean acidification on two species of North Atlantic bivalve shellfish, Mercenaria mercenaria and Argopecten irradians. Adults of both species were subjected to high and low pCO 2 conditions during gametogenesis. Resultant larvae were exposed to low and ambient pH conditions in addition to multiple, additional stressors including thermal stress, food-limitation, and exposure to a harmful alga. There were no indications of transgenerational acclimation to ocean acidification during experiments. Offspring of elevated pCO 2 -treatment adults were significantly more vulnerable to acidification as well as the additional stressors. Our results suggest that clams and scallops are unlikely to acclimate to ocean acidification over short time scales and that as coastal oceans continue to acidify, negative effects on these populations may become compounded and more severe.

Impact of seawater carbonate chemistry on the calcification of marine bivalves

Science.gov (United States)

Thomsen, J.; Haynert, K.; Wegner, K. M.; Melzner, F.

2015-07-01

Bivalve calcification, particularly of the early larval stages, is highly sensitive to the change in ocean carbonate chemistry resulting from atmospheric CO2 uptake. Earlier studies suggested that declining seawater [CO32-] and thereby lowered carbonate saturation affect shell production. However, disturbances of physiological processes such as acid-base regulation by adverse seawater pCO2 and pH can affect calcification in a secondary fashion. In order to determine the exact carbonate system component by which growth and calcification are affected it is necessary to utilize more complex carbonate chemistry manipulations. As single factors, pCO2 had no effects and [HCO3-] and pH had only limited effects on shell growth, while lowered [CO32-] strongly impacted calcification. Dissolved inorganic carbon (CT) limiting conditions led to strong reductions in calcification, despite high [CO32-], indicating that [HCO3-] rather than [CO32-] is the inorganic carbon source utilized for calcification by mytilid mussels. However, as the ratio [HCO3-] / [H+] is linearly correlated with [CO32-] it is not possible to differentiate between these under natural seawater conditions. An equivalent of about 80 μmol kg-1 [CO32-] is required to saturate inorganic carbon supply for calcification in bivalves. Below this threshold biomineralization rates rapidly decline. A comparison of literature data available for larvae and juvenile mussels and oysters originating from habitats differing substantially with respect to prevailing carbonate chemistry conditions revealed similar response curves. This suggests that the mechanisms which determine sensitivity of calcification in this group are highly conserved. The higher sensitivity of larval calcification seems to primarily result from the much higher relative calcification rates in early life stages. In order to reveal and understand the mechanisms that limit or facilitate adaptation to future ocean acidification, it is necessary to better

Bivalves: From individual to population modelling

Science.gov (United States)

Saraiva, S.; van der Meer, J.; Kooijman, S. A. L. M.; Ruardij, P.

2014-11-01

An individual based population model for bivalves was designed, built and tested in a 0D approach, to simulate the population dynamics of a mussel bed located in an intertidal area. The processes at the individual level were simulated following the dynamic energy budget theory, whereas initial egg mortality, background mortality, food competition, and predation (including cannibalism) were additional population processes. Model properties were studied through the analysis of theoretical scenarios and by simulation of different mortality parameter combinations in a realistic setup, imposing environmental measurements. Realistic criteria were applied to narrow down the possible combination of parameter values. Field observations obtained in the long-term and multi-station monitoring program were compared with the model scenarios. The realistically selected modeling scenarios were able to reproduce reasonably the timing of some peaks in the individual abundances in the mussel bed and its size distribution but the number of individuals was not well predicted. The results suggest that the mortality in the early life stages (egg and larvae) plays an important role in population dynamics, either by initial egg mortality, larvae dispersion, settlement failure or shrimp predation. Future steps include the coupling of the population model with a hydrodynamic and biogeochemical model to improve the simulation of egg/larvae dispersion, settlement probability, food transport and also to simulate the feedback of the organisms' activity on the water column properties, which will result in an improvement of the food quantity and quality characterization.

Polychlorinated biphenyls, organochlorine pesticides and polycyclic aromatic hydrocarbons in a one-off global survey of bivalves

DEFF Research Database (Denmark)

Vorkamp, Katrin; Strand, Jakob; Christensen, Jan H.

2010-01-01

During the Danish Galathea 3 expedition, bivalve samples were collected at the Faroe Islands, Greenland, Ghana, South Africa, Australia, Solomon Islands, New Zealand, Chile, US Virgin Islands, Boston, Newfoundland and Shetland Islands and analysed for organochlorines and PAHs. Concentration...... in terms of PCB and PAH levels, while other Greenland samples came closest to representing PAH background levels. Several locations had undetectable organochlorine levels, including Hobart and Chile, which had the lowest Sigma PAH concentrations (group the stations...

Uptake and loss of 134Cs and 60Co by the Baltic bivalve Macoma Baltica under laboratory conditions

International Nuclear Information System (INIS)

Evans, S.

1982-01-01

In order to predict the radiological impact on man via harvestable sea food products, it is essential to make a critical evaluation of the transfer routes and the rates on which radionuclides are transferred through the aquatic food chains. In the Baltic, the bivalve Macoma Baltica comprises a main food item for fish species of commercial interest, such as flounder. The accumulation and release of Cs-134 and Co-60 by Macoma was experimentally investigated. The nuclides were added to the water and the activity content of the bivalves was determined at regular intervals. The uptake was quite rapid, 40 per cent (Cs) and 55 per cent (Co) respectively of the final steady state was obtained after 24 hours. The subsequent release was rapid as well, 50 per cent (Cs) and 40 per cent (Co) respectively of the accumulated activity was lost within 6 days. The experiments demonstrated that the major intake route following short-term releases of activity will be from the water column. The close connection between activity in water and organism can thus be used for predictive purposes without the complication of radionuclide uptake from contaminated sediments. (Author)

Biological contaminants and house characteristics : an interim analysis of data from the PEI study

Energy Technology Data Exchange (ETDEWEB)

Onysko, D.M. [DMO Associates (Canada); Ruest, K. [Canada Mortgage and Housing Corp., Ottawa, ON (Canada); Lawton, M. [Morrison Hershfield Ltd., Ottawa, ON (Canada); Miller, D. [Carleton Univ., Ottawa, ON (Canada); Fraser, B. [Jacques Whitford and Associates Limited, Ottawa, ON (Canada); Dale, R. [Health Canada, Ottawa, ON (Canada); Kazimierz, K.F.

2005-07-01

This paper discussed the results of a joint study on housing conditions, biological exposure and the health of infants in Prince Edward Island (PEI). The study was a longitudinal cohort investigation of the exposure of infants to biological materials in their home environments. Possible associations between housing data, biological data, operational circumstances and relevant family life style information were presented. A methodology of the study was presented, in which a total of 366 dwellings with newborn infants were monitored over a period of 6 years. All tests and inspections were presented, as well as the nature of variables in the study. House investigations included the following: housing and operational characteristics; variables related to the measure of molds in the air; mold areas as determined by visual inspection; the presence/absence of visible molds; past wetting events; and concentrations of endotoxins, ergosterol and allergens in various air and settled dust samples. It was concluded that there was support for the presumption that some housing characteristics were related to factors that may influence the health of occupants and their children. Moisture related concerns dominated the experimental design. Details of the following housing characteristics were summarized: ground moisture source coupling; operation of the residence by the occupant; analysis of dust samples; visible molds; and wetting events. It was concluded that further work is needed to review the final database in order to further correlate studies with the health of newborns who lived in the houses studied. 3 refs., 8 tabs., 4 figs.

Late Devonian (Frasnian) bivalves from the Nocedo Formation: the results of Wilhelm Kegel’s 1927 field trip to northern Spain

NARCIS (Netherlands)

Amler, M.R.W.

2010-01-01

During a field trip to the Peña-Corada Unit of the southernmost Esla region of the Cantabrian Mountains in 1927, the German stratigrapher Wilhelm Kegel sampled brachiopods and bivalves from a section in the Laoz valley near La Ercina. The stratigraphic position is believed to be part of the Nocedo

Physiological effects of hypercapnia in the deep-sea bivalve Acesta excavata (Fabricius, 1779) (Bivalvia; Limidae)

DEFF Research Database (Denmark)

Hammer, Karen M.; Kristiansen, Erlend; Zachariassen, Karl Erik

2011-01-01

The option of storing CO(2) in subsea rock formations to mitigate future increases in atmospheric CO(2) may induce problems for animals in the deep sea. In the present study the deep-sea bivalve Acesta excavata was subjected to environmental hypercapnia (pHSW 6.35, P(CO2), =33,000 mu atm...... extracellular pH remained significantly lower during recovery. Intracellular non-bicarbonate buffering capacity of the posterior adductor muscle of hypercapnic animals was significantly lower than control values, but this was not the case for the remaining tissues analyzed. Oxygen consumption initially dropped...

Interactive effects of pH and metals on mitochondrial functions of intertidal bivalves Crassostrea virginica and Mercenaria mercenaria

International Nuclear Information System (INIS)

Ivanina, Anna V.; Sokolova, Inna M.

2013-01-01

Highlights: •Interactive effects of trace metals Cd and Cu and pH were studied in mitochondria of clams and oysters. •Mitochondrial respiration and membrane potential of bivalves were robust to pH variation (6.6–7.8). •Elevated levels of Cd and Cu inhibited mitochondrial respiration in the pH-dependent manner but did not affect the membrane potential. •Negative effects of Cd and Cd on mitochondrial respiration were alleviated at low pH (7.0 and below). •Moderate acidosis may protect molluscan mitochondria from metal toxicity. -- Abstract: Intertidal bivalves experience broad fluctuations of environmental temperature, pH and oxygen content which could change their intracellular pH. They are also exposed to trace metals such as cadmium (Cd) and copper (Cu) that accumulate in their tissues and may negatively affect mitochondrial functions and bioenergetics. We determined the interactive effects of pH and trace metals (25 μM Cd or Cu) on mitochondrial functions (including respiration and membrane potentials in both ADP-stimulated (state 3) and resting (state 4) states) of two common marine bivalves, the hard clams (Mercenaria mercenaria) and eastern oysters (Crassostrea virginica). In the absence of the trace metals, mitochondrial functions of C. virginica and M. mercenaria were insensitive to pH in a broad physiologically relevant range (6.6–7.8). Mitochondrial respiration was generally suppressed by 25 μM Cd or Cu (with the stronger effects observed for ADP-stimulated compared to the resting respiration) while the mitochondrial membrane potential was unaffected. pH modulated the effects of Cu and Cd on mitochondrial respiration of the bivalves. In oysters, Cu suppressed ADP-stimulated mitochondrial respiration at high and low pH values (6.6 and 7.8, respectively), but had no effect in the intermediate pH range (7.0–7.4). In clams, the negative effect of Cu on ADP-stimulated respiration was only observed at extremely high pH (7.8). A decrease in p

Interactive effects of pH and metals on mitochondrial functions of intertidal bivalves Crassostrea virginica and Mercenaria mercenaria

Energy Technology Data Exchange (ETDEWEB)

Ivanina, Anna V.; Sokolova, Inna M., E-mail: isokolov@uncc.edu

2013-11-15

Highlights: •Interactive effects of trace metals Cd and Cu and pH were studied in mitochondria of clams and oysters. •Mitochondrial respiration and membrane potential of bivalves were robust to pH variation (6.6–7.8). •Elevated levels of Cd and Cu inhibited mitochondrial respiration in the pH-dependent manner but did not affect the membrane potential. •Negative effects of Cd and Cd on mitochondrial respiration were alleviated at low pH (7.0 and below). •Moderate acidosis may protect molluscan mitochondria from metal toxicity. -- Abstract: Intertidal bivalves experience broad fluctuations of environmental temperature, pH and oxygen content which could change their intracellular pH. They are also exposed to trace metals such as cadmium (Cd) and copper (Cu) that accumulate in their tissues and may negatively affect mitochondrial functions and bioenergetics. We determined the interactive effects of pH and trace metals (25 μM Cd or Cu) on mitochondrial functions (including respiration and membrane potentials in both ADP-stimulated (state 3) and resting (state 4) states) of two common marine bivalves, the hard clams (Mercenaria mercenaria) and eastern oysters (Crassostrea virginica). In the absence of the trace metals, mitochondrial functions of C. virginica and M. mercenaria were insensitive to pH in a broad physiologically relevant range (6.6–7.8). Mitochondrial respiration was generally suppressed by 25 μM Cd or Cu (with the stronger effects observed for ADP-stimulated compared to the resting respiration) while the mitochondrial membrane potential was unaffected. pH modulated the effects of Cu and Cd on mitochondrial respiration of the bivalves. In oysters, Cu suppressed ADP-stimulated mitochondrial respiration at high and low pH values (6.6 and 7.8, respectively), but had no effect in the intermediate pH range (7.0–7.4). In clams, the negative effect of Cu on ADP-stimulated respiration was only observed at extremely high pH (7.8). A decrease in p

Influence of volunteer and project characteristics on data quality of biological surveys.

Science.gov (United States)

Lewandowski, Eva; Specht, Hannah

2015-06-01

Volunteer involvement in biological surveys is becoming common in conservation and ecology, prompting questions on the quality of data collected in such surveys. In a systematic review of the peer-reviewed literature on the quality of data collected by volunteers, we examined the characteristics of volunteers (e.g., age, prior knowledge) and projects (e.g., systematic vs. opportunistic monitoring schemes) that affect data quality with regards to standardization of sampling, accuracy and precision of data collection, spatial and temporal representation of data, and sample size. Most studies (70%, n = 71) focused on the act of data collection. The majority of assessments of volunteer characteristics (58%, n = 93) examined the effect of prior knowledge and experience on quality of the data collected, often by comparing volunteers with experts or professionals, who were usually assumed to collect higher quality data. However, when both groups' data were compared with the same accuracy standard, professional data were more accurate in only 4 of 7 cases. The few studies that measured precision of volunteer and professional data did not conclusively show that professional data were less variable than volunteer data. To improve data quality, studies recommended changes to survey protocols, volunteer training, statistical analyses, and project structure (e.g., volunteer recruitment and retention). © 2015, Society for Conservation Biology.

The Shell of the Invasive Bivalve Species Dreissena polymorpha: Biochemical, Elemental and Textural Investigations.

Directory of Open Access Journals (Sweden)

Françoise Immel

Full Text Available The zebra mussel Dreissena polymorpha is a well-established invasive model organism. Although extensively used in environmental sciences, virtually nothing is known of the molecular process of its shell calcification. By describing the microstructure, geochemistry and biochemistry/proteomics of the shell, the present study aims at promoting this species as a model organism in biomineralization studies, in order to establish a bridge with ecotoxicology, while sketching evolutionary conclusions. The shell of D. polymorpha exhibits the classical crossed-lamellar/complex crossed lamellar combination found in several heterodont bivalves, in addition to an external thin layer, the characteristics of which differ from what was described in earlier publication. We show that the shell selectively concentrates some heavy metals, in particular uranium, which predisposes D. polymorpha to local bioremediation of this pollutant. We establish the biochemical signature of the shell matrix, demonstrating that it interacts with the in vitro precipitation of calcium carbonate and inhibits calcium carbonate crystal formation, but these two properties are not strongly expressed. This matrix, although overall weakly glycosylated, contains a set of putatively calcium-binding proteins and a set of acidic sulphated proteins. 2D-gels reveal more than fifty proteins, twenty of which we identify by MS-MS analysis. We tentatively link the shell protein profile of D. polymorpha and the peculiar recent evolution of this invasive species of Ponto-Caspian origin, which has spread all across Europe in the last three centuries.

The chemical and biological characteristics of coke-oven wastewater by ozonation

International Nuclear Information System (INIS)

Chang, E.-E.; Hsing, H.-J.; Chiang, P.-C.; Chen, M.-Y.; Shyng, J.-Y.

2008-01-01

A bench-scale bubble column reactor was used to investigate the biological and chemical characteristics of coke-oven wastewater after ozonation treatment through the examination of selected parameters. Color and thiocyanate could be removed almost entirely; however, organic matter and cyanide could not, due to the inadequate oxidation ability of ozone to remove ozonated byproducts under given experimental conditions. The removal of cyanide and total organic carbon were pH-dependent and were found to be efficient under neutral to alkaline conditions. The removal rate for thiocyanate was about five times that of cyanide. The ozone consumption ratio approached to about 1 at the early stage of ozonation (time TOC ) increased to 30%, indicating that easily degraded pollutants were degraded almost entirely. The effect of ozonation on the subsequent biological treatment unit (i.e., activated sludge process) was determined by observing the ratio of 5-day biological oxygen demand to chemical oxygen demand (BOD 5 /COD) and the specific oxygen utilization rate (SOUR). The results indicated that the contribution of ozonation to inhibition reduction was very significant but limited to the enhancement of biodegradation. The operation for ozonation of coke-oven wastewater was feasible under neutral condition and short ozone contact time in order to achieve better performance and cost savings

Assessing the presence of marine toxins in bivalve molluscs from southwest India.

Science.gov (United States)

Turner, Andrew D; Dhanji-Rapkova, Monika; Rowland-Pilgrim, Stephanie; Turner, Lucy M; Rai, Ashwin; Venugopal, Moleyur N; Karunasagar, Indrani; Godhe, Anna

2017-12-15

The south west coast of India has been showing a steady increase in shellfish cultivation both for local consumption and fishery export, over recent years. Perna viridis and Crassostrea madrasensis are two species of bivalve molluscs which grow in some selected regions of southern Karnataka, close to the city of Mangalore. In the early 1980s, shellfish consumers in the region were affected by intoxication from Paralytic Shellfish Poison present in local bivalves (clams and oysters) resulting in hospitalisation of many, including one fatality. Since then, there have been no further reports of serious shellfish intoxication and there is little awareness of the risks from natural toxins and no routine monitoring programme in place to protect shellfish consumers. This study presents the findings from the first ever systematic assessment of the presence of marine toxins in mussels and oysters grown in four different shellfish harvesting areas in the region. Shellfish were collected and subjected to analysis for ASP, PSP and lipophilic toxins, as well as a suite of non-EU regulated toxins such as tetrodotoxin and selected cyclic imines. Results revealed the presence of low levels of PSP toxins in oysters throughout the study period. Overall, total toxicities reached a maximum of 10% of the EU regulatory limit of 800 μg STX eq/kg. Toxin profiles were similar to those reported from the 1980 outbreak. No evidence was found for significant levels of ASP and lipophilic toxins, although some cyclic imines were detected, including gymnodimine. The results indicated that the risk to shellfish consumers during this specific study period would have been low. However, with historical evidence for extremely high levels of PSP toxins in molluscs, there is a strong need for routine surveillance of shellfish production areas for marine toxins, in order to mitigate against human health impacts resulting from unexpected harmful algal blooms, with potentially devastating socio

Inducing the Alternative Oxidase Forms Part of the Molecular Strategy of Anoxic Survival in Freshwater Bivalves

Science.gov (United States)

Yusseppone, Maria S.; Rocchetta, Iara; Sabatini, Sebastian E.; Luquet, Carlos M.; Ríos de Molina, Maria del Carmen; Held, Christoph; Abele, Doris

2018-01-01

Hypoxia in freshwater ecosystems is spreading as a consequence of global change, including pollution and eutrophication. In the Patagonian Andes, a decline in precipitation causes reduced lake water volumes and stagnant conditions that limit oxygen transport and exacerbate hypoxia below the upper mixed layer. We analyzed the molecular and biochemical response of the North Patagonian bivalve Diplodon chilensis after 10 days of experimental anoxia (<0.2 mg O2/L), hypoxia (2 mg O2/L), and normoxia (9 mg O2/L). Specifically, we investigated the expression of an alternative oxidase (AOX) pathway assumed to shortcut the regular mitochondrial electron transport system (ETS) during metabolic rate depression (MRD) in hypoxia-tolerant invertebrates. Whereas, the AOX system was strongly upregulated during anoxia in gills, ETS activities and energy mobilization decreased [less transcription of glycogen phosphorylase (GlyP) and succinate dehydrogenase (SDH) in gills and mantle]. Accumulation of succinate and induction of malate dehydrogenase (MDH) activity could indicate activation of anaerobic mitochondrial pathways to support anoxic survival in D. chilensis. Oxidative stress [protein carbonylation, glutathione peroxidase (GPx) expression] and apoptotic intensity (caspase 3/7 activity) decreased, whereas an unfolded protein response (HSP90) was induced under anoxia. This is the first clear evidence of the concerted regulation of the AOX and ETS genes in a hypoxia-tolerant freshwater bivalve and yet another example that exposure to hypoxia and anoxia is not necessarily accompanied by oxidative stress in hypoxia-tolerant mollusks. PMID:29527172

Inducing the Alternative Oxidase Forms Part of the Molecular Strategy of Anoxic Survival in Freshwater Bivalves

Directory of Open Access Journals (Sweden)

Maria S. Yusseppone

2018-02-01

Full Text Available Hypoxia in freshwater ecosystems is spreading as a consequence of global change, including pollution and eutrophication. In the Patagonian Andes, a decline in precipitation causes reduced lake water volumes and stagnant conditions that limit oxygen transport and exacerbate hypoxia below the upper mixed layer. We analyzed the molecular and biochemical response of the North Patagonian bivalve Diplodon chilensis after 10 days of experimental anoxia (<0.2 mg O2/L, hypoxia (2 mg O2/L, and normoxia (9 mg O2/L. Specifically, we investigated the expression of an alternative oxidase (AOX pathway assumed to shortcut the regular mitochondrial electron transport system (ETS during metabolic rate depression (MRD in hypoxia-tolerant invertebrates. Whereas, the AOX system was strongly upregulated during anoxia in gills, ETS activities and energy mobilization decreased [less transcription of glycogen phosphorylase (GlyP and succinate dehydrogenase (SDH in gills and mantle]. Accumulation of succinate and induction of malate dehydrogenase (MDH activity could indicate activation of anaerobic mitochondrial pathways to support anoxic survival in D. chilensis. Oxidative stress [protein carbonylation, glutathione peroxidase (GPx expression] and apoptotic intensity (caspase 3/7 activity decreased, whereas an unfolded protein response (HSP90 was induced under anoxia. This is the first clear evidence of the concerted regulation of the AOX and ETS genes in a hypoxia-tolerant freshwater bivalve and yet another example that exposure to hypoxia and anoxia is not necessarily accompanied by oxidative stress in hypoxia-tolerant mollusks.

Occurrence of potentially pathogenic Vibrio in oysters (Crassostrea gigas and waters from bivalve mollusk cultivations in the South Bay of Santa Catarina

Directory of Open Access Journals (Sweden)

Roberta Juliano Ramos

2014-06-01

Full Text Available Introduction This research aimed to identify and quantify potentially pathogenic Vibrio from different cultivations of bivalve shellfish in the State of Santa Catarina, Brazil, and water regions in the South Bay, as well as correlate the incidence of these microorganisms with the physicochemical parameters of marine waters. Methods Between October 2008 and March 2009, 60 oyster and seawater samples were collected from six regions of bivalve mollusk cultivation, and these samples were submitted for Vibrio counts. Results Twenty-nine (48.3% oyster samples were revealed to be contaminated with one or more Vibrio species. The Vibrio parahaemolyticus and Vibrio vulnificus counts in the samples ranged from < 0.5 log10 Most Probable Number (MPN g–1 to 2.3 log10 MPN g–1 oyster and from < 0.5 log10 MPN g–1 to 2.1 log10 MPN g–1 oyster, respectively. Of the 60 seawater samples analyzed, 44 (73.3% showed signs of contamination with one or more vibrio species. The counts of V. parahaemolyticus and V. vulnificus in the samples ranged from < 0.3 log10 MPN·100mL–1 to 1.7 log10MPN·100mL–1 seawater and from < 0.3 log10 MPN·100mL–1 to 2.0 log10 MPN·100mL–1 seawater, respectively. A positive correlation between V. vulnificus counts and the seawater temperature as well as a negative correlation between the V. parahaemolyticus counts and salinity were observed. Conclusions The results suggest the need to implement strategies to prevent vibrio diseases from being transmitted by the consumption of contaminated bivalve shellfish.

Effect of solids retention time and wastewater characteristics on biological phosphorus removal

DEFF Research Database (Denmark)

Henze, Mogens; Aspegren, H.; Jansen, J.l.C.

2002-01-01

with time which has importance in relation to modelling. The overall conclusion of the comparison between the two plants is that the biological phosphorus removal efficiency under practical operating conditions is affected by the SRT in the plant and the wastewater composition. Thus great care should......The paper deals with the effect of wastewater, plant design and operation in relation to biological nitrogen and phosphorus removal and the possibilities to model the processes. Two Bio-P pilot plants were operated for 2.5 years in parallel receiving identical wastewater. The plants had SRT of 4...... and 21 days, the latter had nitrification and denitrification. The plant with 4 days SRT had much more variable biomass characteristics, than the one with the high SRT. The internal storage compounds, PHA, were affected significantly by the concentration of fatty acids or other easily degradable organics...

Characteristics of Nanoparticles in Drinking Water Treatment using Biological Activated Carbon

Directory of Open Access Journals (Sweden)

Desmiarti Reni

2018-01-01

Full Text Available Characteristics of nanoparticles in drinking water treatment were performed using five types of biological activated carbon (BAC columns (BAC1-BAC5 in continuous flow experiments. The BAC was created by covering granular activated carbon (GAC with attached microorganisms from water samples taken from the Nagara River in Japan. The total running time was about 2000 h. The characteristics of the nanoparticles were investigated based on size distribution and volume distribution measured by Zetasizer Nano. Total dissolved organic carbon (DOC and ultraviolet absorbance at 260 nm (UV260 were also studied. The important results in this study were that the detached nanoparticles in the effluent were within the size distribution ranges of 0.26~5.62 nm, 0.62~3.62 nm, 0.62~3.12 nm, 0.62~4.19 nm, and 0.62~6.50 for BAC 1, 2, 3, 4 and 5, respectively. The profile of peak size and peak number along the bed depth of the BAC columns was evaluated for better understanding the characteristics of the nanoparticles. This result is very important for improving drinking water treatment using granular activated carbon to remove microorganisms.

[Cycloferon biological activity characteristics].

Science.gov (United States)

Utkina, T M; Potekhina, L P; Kartashova, O L; Vasilchenko, A S

2014-01-01

Study the effect of cycloferon in experimental and clinical conditions on persistence properties of aurococci as well as features of their morpho-functional reaction by atomic force microscopy. The study was carried out in 12 Staphylococcus aureus clones isolated from mucous membrane of nose anterior part of a resident carrier. The effect of cycloferon in vivo was evaluated in 26 resident staphylococci carriers under the control of anti-carnosine activity of staphylococci. Anti-carnosine activity was determined by O.V. Bukharin et al. (1999), biofilm formation -by G.A. O'Toole et al. (2000). Staphylococci treated with cycloferon were studied by atomic force microscopy in contact mode using scanning probe SMM-2000 microscope. The decrease of persistence properties of staphylococci under the effect of cycloferon in vitro and in vivo may be examined as one of the mechanisms of biological activity of the preparation. A significant increase of S. aureus surface roughness and changes in their morphology under the effect of cycloferon allow stating the disorder of barrier functions in the aurococci cell wall. The data obtained expand the understanding of cycloferon biological activity mechanisms.

Biological characteristics of the hydrological landscapes in the Bay of Biscay in spring 2009

KAUST Repository

Lezama-Ochoa, Ainhoa; Grados, Daniel; Lebourges-Dhaussy, Anne; Irigoien, Xabier; Chaigneau, Alexis; Bertrand, Arnaud

2015-01-01

In the present study we investigated the biogeography of macrozooplankton and fish biomass in the Bay of Biscay. In this region, we defined six different landscapes based on the hydrogeographical characteristics observed in spring 2009. We then related landscape's characteristics and environmental parameters such as light attenuation depth and chlorophyll-a with macrozooplankton and fish acoustic biomass. Hydrodynamic structures together with coastal influences (river discharges, predation pressure and depth preference) and vertical thermohaline structure/mixing (feeding modes and ability to stay in preferred layers) appeared as the main factors determining the biological distribution. Besides, variance partitioning was used to assess the respective roles played by the hydrological environment, the geographical space and the biological environment alone, and their interactions. Results revealed that: (i) macrozooplankton and fish have a preference for different hydrogeographical landscapes; (ii) the association between hydrological conditions and geographical features, i.e. the spatial structure of the hydrological environment, plays a key role in the distribution of macrozooplankton; and (iii) prey-predator relationships have to be taken into account to provide a comprehensive characterization of habitat suitability.

Biological characteristics of the hydrological landscapes in the Bay of Biscay in spring 2009

KAUST Repository

Lezama-Ochoa, Ainhoa

2015-01-01

In the present study we investigated the biogeography of macrozooplankton and fish biomass in the Bay of Biscay. In this region, we defined six different landscapes based on the hydrogeographical characteristics observed in spring 2009. We then related landscape\\'s characteristics and environmental parameters such as light attenuation depth and chlorophyll-a with macrozooplankton and fish acoustic biomass. Hydrodynamic structures together with coastal influences (river discharges, predation pressure and depth preference) and vertical thermohaline structure/mixing (feeding modes and ability to stay in preferred layers) appeared as the main factors determining the biological distribution. Besides, variance partitioning was used to assess the respective roles played by the hydrological environment, the geographical space and the biological environment alone, and their interactions. Results revealed that: (i) macrozooplankton and fish have a preference for different hydrogeographical landscapes; (ii) the association between hydrological conditions and geographical features, i.e. the spatial structure of the hydrological environment, plays a key role in the distribution of macrozooplankton; and (iii) prey-predator relationships have to be taken into account to provide a comprehensive characterization of habitat suitability.

Scientific opinion on the risks for public health related to the presence of tetrodotoxin (TTX) and TTX analogues in marine bivalves and gastropods

DEFF Research Database (Denmark)

Petersen, Annette

Tetrodotoxin (TTX) and its analogues are produced by marine bacteria and have been detected in marine bivalves and gastropods from European waters. The European Commission asked EFSA for a scientific opinion on the risks to public health related to the presence of TTX and TTX analogues in marine...... bivalves and gastropods. The Panel on Contaminants in the Food Chain reviewed the available literature but did not find support for the minimum lethal dose for humans of 2 mg, mentioned in various reviews. Some human case reports describe serious effects at a dose of 0.2 mg, corresponding to 4 μg/kg body...... weight (bw). However, the uncertainties on the actual exposure in the studies preclude their use for derivation of an acute reference dose (ARfD). Instead, a group ARfD of 0.25 μg/kg bw, applying to TTX and its analogues, was derived based on a TTX dose of 25 μg/kg bw at which no apathy was observed...

The quagga mussel (Dreissena rostriformis bugensis Andrusov, 1897 – another Ponto-Caspian dreissenid bivalve in the southern Baltic catchment: the first record from the Szczecin Lagoon

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Adam Woźniczka

2016-04-01

Full Text Available In 2014, a non-indigenous dreissenid bivalve, the quagga mussel (Dreissena rostriformis bugensis Andrusov, 1897 was for the first time recorded in the Szczecin Lagoon. This was also the first record of the species in the Baltic Sea catchment. The quagga mussel was found to accompany the zebra mussel (Dreissena polymorpha, a non-indigenous bivalve already firmly established in the Lagoon. As indicated by the new immigrant's estimated abundance (4000.0 ± 355.44 ind. m−2 and the zebra mussel to quagga mussel abundance ratio (about 60:40, the immigration of D. rostriformis bugensis to the Lagoon can be regarded as successful. The quagga mussel has already formed a strong and reproducing population which co-occurs with that of the zebra mussel in the area.

Reproductive biology characteristic of Jatropha curcas (Euphorbiaceae).

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Wang, Xiu-Rong; Ding, Gui-Jie

2012-12-01

Jatropha curcas belongs to family of Euphorbiaceae, and is an important biological tree species for diesel production. The current descriptions of the phenotypic traits for male and female flowers are not comprehensive and there have been no reports about the process of J. curcas from pollen germination on stigma to pollen tubes conducting fertilization after entering the ovary and ovule. To assess this, experiments were undertaken to study the reproductive biology characteristic of J. curcas in Guiyang Guizhou Province, China. Floral structure and pollen germination process were described in detail and the breeding system was determined. The results showed that flower of J. curcas was both unisexual and monoecious, with a flowering phase between April-November. Both female and male flowers have five petals in contorted arrangement and five calyxes in imbricated arrangement. Female flower originated from bisexual flower finally formed unisexual flowers as the stamen ceased growth in different period. The pistil had 3-5 styles, connected at base and separated into 3-5 stigmas on the top. Each stigma had 2-4 lobes. The styles were hollow. The pollen germinated on the surface of the stigma, is then transported via the vascular tissues, which was arranged in bundles, and finally channeled through the micropyle to enter the blastula. The pollen tube was shaped in a long uneven cylinder. The top end of it became swollen and formed a small round hole for the purpose of releasing sperm nuclei while the pollen tube itself was growing and extending. Estimation of out-crossing index and artificial pollination experiments indicated that J. curcas was capable of both self-pollination and cross-pollination. The germination speed of the pollen on the stigma did not differ so much between the one by self-pollination and the one by cross-pollination, and the pollen from the two different sources could both reach the ovary within one day. Both artificial pollination test and out

Reproductive biology characteristic of Jatropha curcas (Euphorbiaceae

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Xiu-Rong Wang

2012-12-01

Full Text Available Jatropha curcas belongs to family of Euphorbiaceae, and is an important biological tree species for diesel production. The current descriptions of the phenotypic traits for male and female flowers are not comprehensive and there have been no reports about the process of J. curcas from pollen germination on stigma to pollen tubes conducting fertilization after entering the ovary and ovule. To assess this, experiments were undertaken to study the reproductive biology characteristic of J. curcas in Guiyang Guizhou Province, China. Floral structure and pollen germination process were described in detail and the breeding system was determined. The results showed that flower of J. curcas was both unisexual and monoecious, with a flowering phase between April-November. Both female and male flowers have five petals in contorted arrangement and five calyxes in imbricated arrangement. Female flower originated from bisexual flower finally formed unisexual flowers as the stamen ceased growth in different period. The pistil had 3-5 styles, connected at base and separated into 3-5 stigmas on the top. Each stigma had 2-4 lobes. The styles were hollow. The pollen germinated on the surface of the stigma, is then transported via the vascular tissues, which was arranged in bundles, and finally channeled through the micropyle to enter the blastula. The pollen tube was shaped in a long uneven cylinder. The top end of it became swollen and formed a small round hole for the purpose of releasing sperm nuclei while the pollen tube itself was growing and extending. Estimation of out-crossing index and artificial pollination experiments indicated that J. curcas was capable of both self-pollination and cross-pollination. The germination speed of the pollen on the stigma did not differ so much between the one by self-pollination and the one by cross-pollination, and the pollen from the two different sources could both reach the ovary within one day. Both artificial

Hepatitis A and E Viruses in Wastewaters, in River Waters, and in Bivalve Molluscs in Italy.

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Iaconelli, M; Purpari, G; Della Libera, S; Petricca, S; Guercio, A; Ciccaglione, A R; Bruni, R; Taffon, S; Equestre, M; Fratini, M; Muscillo, M; La Rosa, Giuseppina

2015-12-01

Several studies have reported the detection of hepatitis A (HAV) and E (HEV) virus in sewage waters, indicating a possibility of contamination of aquatic environments. The objective of the present study was to assess the occurrence of HAV and HEV in different water environments, following the route of contamination from raw sewage through treated effluent to the surface waters receiving wastewater discharges . Bivalve molluscan shellfish samples were also analyzed, as sentinel of marine pollution. Samples were tested by RT-PCR nested type in the VP1/2A junction for HAV, and in the ORF1 and ORF2 regions for HEV. Hepatitis A RNA was detected in 12 water samples: 7/21 (33.3%) raw sewage samples, 3/21 (14.3%) treated sewage samples, and 2/27 (7.4%) river water samples. Five sequences were classified as genotype IA, while the remaining 7 sequences belonged to genotype IB. In bivalves, HAV was detected in 13/56 samples (23.2%), 12 genotype IB and one genotype IA. Whether the presence of HAV in the matrices tested indicates the potential for waterborne and foodborne transmission is unknown, since infectivity of the virus was not demonstrated. HEV was detected in one raw sewage sample and in one river sample, both belonging to genotype 3. Sequences were similar to sequences detected previously in Italy in patients with autochthonous HEV (no travel history) and in animals (swine). To our knowledge, this is the first detection of HEV in river waters in Italy, suggesting that surface water can be a potential source for exposure .

Biomarkers of metabolism disturbance in bivalve molluscs induced by environmental pollution with processed by-products of oil

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E. V. Sukharenko

2017-05-01

Full Text Available Processed by-products of oil are the most common pollutants in all river and sea water. The increase in oxidative stress in bivalve molluscs was studied in both tissues of the hepatopancreas and the gill. The model for artificial treatment with processed by-products of oil was performed in a laboratory experiment with the river mollusc Dreissena polymorpha Pallas, 1771. The exposure of the molluscs over 28 days to mazut 50 mg/l induced significant increase of both final product of lipid peroxidation (LPO and antioxidant enzime activity. A significant increase in LPO was observed in the hepatopancreas and gill of D. polymorpha treated with mazut compared to the control group. Antioxidant enzyme activity of cartalase, supeoxide dismutase, glutathione reductase and glutathione-S-transferase showed a greater increase (by almost 1.5 times in the hepatopancreas than in the gill of D. polymorpha. A similar LPO growth and modulation of antioxidant enzyme activity were determined in the hepatopancreas and gill of the mussel Mytilus galloprovincialis Lamarck, 1879 collected in an area polluted with resins, hydrocarbons and asphaltenes, Donuzlav lake in the Kerch gulf. Varied cellular reactivation of the antioxidant enzyme system in the hepatopancreas rather than the gill was observed in both kinds of mollusc Dreissena and Mytilus. The obtained results are evidence of the higher sensitivity of the hepatopancreas cells of bivalve molluscs to organic pollutants compared to the gill cells.

Effect of host and food availability on the biological characteristics of Trichogramma galloi Zucchi (Hymenoptera, Trichogrammatidae)

International Nuclear Information System (INIS)

Pratissoli, Dirceu; Oliveira, Harley N. de; Oliveira, Regiane C. de; Zago, Hugo B.; Vieira, Stella M.J.

2004-01-01

Effect of host and food availability on the biological characteristics of Trichogramma galloi Zucchi (Hymenoptera, Trichogrammatidae). Biological characteristics of Trichogramma galloi Zucchi, 1988 were evaluated in laboratory where these parasitoids were reared on eggs of Diatraea saccharalis (Lepidoptera, Pyralidae) with or without honey, and exposed to eggs of the host after 0, 6, 12, 24, 36, 48, 60, 72 and 84 hours of emergence. The parasitism rate and viability showed higher for individuals that received food. The sex ratio was not influenced by food. The number of individuals per egg only showed difference for those adults that did not receive food and stayed six hours without the host eggs. Checking the effect of the availability of eggs, only the sex ratio, with or without honey, did not show differences. The results show that T. galloi needs a carbohydrate supply and the time can influence the reproductive capacity. (author)

The mismatch between bioaccumulation in field and laboratory environments: Interpreting the differences for metals in benthic bivalves

International Nuclear Information System (INIS)

Belzunce-Segarra, Maria J.; Simpson, Stuart L.; Amato, Elvio D.; Spadaro, David A.; Hamilton, Ian L.; Jarolimek, Chad V.; Jolley, Dianne F.

2015-01-01

Laboratory-based bioaccumulation and toxicity bioassays are frequently used to predict the ecological risk of contaminated sediments in the field. This study investigates the bioassay conditions most relevant to achieving environmentally relevant field exposures. An identical series of metal-contaminated marine sediments were deployed in the field and laboratory over 31 days. Changes in metal concentrations and partitioning in both sediments and waters were used to interpret differences in metal exposure and bioaccumulation to the benthic bivalve Tellina deltoidalis. Loss of resuspended sediments and deposition of suspended particulate matter from the overlying water resulted in the concentrations of Cu, Pb and Zn (major contaminants) becoming lower in the 1-cm surface layer of field-deployed sediments. Lower exchange rates of overlying waters in the laboratory resulted in higher dissolved metal exposures. The prediction of metal bioaccumulation by the bivalves in field and laboratory was improved by considering the metal partitioning within the surface sediments. - Highlights: • Particulate metals are the dominant metal exposure route in laboratory and field tests (87). • There is an over-representation of the dissolved metal exposure in the laboratory (81). • Laboratory bioassays result in higher bioaccumulation of major metals, Cu, Pb, Zn (82). • Differences in exposure must be considered for a proper sediment quality evaluation (83). • Traditional measurements are not sufficient to explain bioaccumulation results (79). - To improve the value of field- and laboratory-based sediment bioassays in ecological risk assessments, it is necessary to create exposure conditions that resemble those in the field

[Relationship among the Oxygen Concentration, Reactive Oxygen Species and the Biological Characteristics of Mouse Bone Marrow Hematopoietic Stem Cells].

Science.gov (United States)

Ren, Si-Hua; He, Yu-Xin; Ma, Yi-Ran; Jin, Jing-Chun; Kang, Dan

2016-02-01

To investigate the effects of oxygen concentration and reactive oxygen species (ROS) on the biological characteristics of hematopoietic stem cells (HSC) and to analyzed the relationship among the oxygen concentration, ROS and the biological characteristics of mouse HSC through simulation of oxygen environment experienced by PB HSC during transplantation. The detection of reactive oxygen species (ROS), in vitro amplification, directional differentiation (BFU-E, CFU-GM, CFU-Mix), homing of adhesion molecules (CXCR4, CD44, VLA4, VLA5, P-selectin), migration rate, CFU-S of NOD/SCID mice irradiated with sublethal dose were performed to study the effect of oxgen concentration and reactive oxygen species on the biological characteristics of mouse BM-HSC and the relationship among them. The oxygen concentrations lower than normal oxygen concentration (especially hypoxic oxygen environment) could reduce ROS level and amplify more Lin(-) c-kit(+) Sca-1(+) BM HSC, which was more helpful to the growth of various colonies (BFU-E, CFU-GM, CFU-Mix) and to maintain the migratory ability of HSC, thus promoting CFU-S growth significantly after the transplantation of HSC in NOD/SCID mice irradiated by a sublethal dose. BM HSC exposed to oxygen environments of normal, inconstant oxygen level and strenuously thanging of oxygen concentration could result in higher level of ROS, at the same time, the above-mentioned features and functional indicators were relatively lower. The ROS levels of BM HSC in PB HSCT are closely related to the concentrations and stability of oxygen surrounding the cells. High oxygen concentration results in an high level of ROS, which is not helpful to maintain the biological characteristics of BM HSC. Before transplantation and in vitro amplification, the application of antioxidancs and constant oxygen level environments may be beneficial for transplantation of BMMSC.

Processes of physical change to the seabed and bivalve recruitment over a 10-year period following experimental hydraulic clam dredging on Banquereau, Scotian Shelf

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Gilkinson, K.; King, E. L.; Li, M. Z.; Roddick, D.; Kenchington, E.; Han, G.

2015-01-01

A previous study on the effects of experimental hydraulic clam dredging on seabed habitat and commercial bivalve populations revealed a lack of recovery after a 3-year post-dredging period (1998-2001) on a deep (65-75 m) offshore sandy bank on the Scotian Shelf, Canada. Follow-up sidescan sonar surveys were carried out 5 and 10 years after dredging (2003, 2008) in order to identify long-term processes of seabed recovery. Grab sampling was carried out 10 years after dredging to identify post-dredging commercial bivalve recruitment. Changes in the seafloor, including dredge tracks, were documented with a series of 7 sidescan sonar surveys between 1998 and 2008. A sediment mobility model was constructed based on modeled tidal current and hindcast wave data over this time period to quantify natural seabed disturbance and interpret changes to the dredge tracks mapped by sidescan sonar surveys. The model indicated that tidal currents had minimal effect on sediment mobilization. The main driving force associated with re-working of surficial sediments as evidenced by deterioration of dredge tracks in sonograms was annual fall/winter storms. While the annual frequency of storms and associated wave heights was variable, the observations and sediment mobility calculations suggest that the most influential variable is the magnitude of individual large storms, specifically storms with a significant wave height of ∼11 m. These storms are capable of generating mobile sediment layers of 20-30 cm thickness, equivalent to the dredge blade cutting depth. It appears that, with minor exceptions, sediment properties have returned to pre-dredging conditions 10 years after dredging in this habitat. Based on known age-length relationships, the four commercial bivalve species showed very low recruitment at the experimental site over the 10-year post-dredging period. However, this is unlikely due to a dredging effect since a similar pattern was observed in non-dredged areas.

Applicability of a bioelectronic cardiac monitoring system for the detection of biological effects of pollution in bioindicator species in the Gulf of Finland

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Kholodkevich, Sergey V.; Kuznetsova, Tatiana V.; Sharov, Andrey N.; Kurakin, Anton S.; Lips, Urmas; Kolesova, Natalia; Lehtonen, Kari K.

2017-07-01

Field testing of an innovative technology based on a bioelectronic cardiac monitoring system was carried out in the Gulf of Finland (Baltic Sea). The study shows that the bioelectronic system is suitable for the selected bivalve mollusks Mytilus trossulus, Macoma balthica and Anodonta anatina. Specimens taken from reference sites demonstrated a heart rate recovery time of freshwater and brackish water areas. Development of methodological basis for the testing of adaptive capacities (health) of key aquatic organisms provides new knowledge of biological effects of anthropogenic chemical stress in aquatic organisms.

DICKINSARTELLA FAUNA FROM THE SAIWAN FORMATION (OMAN: A BIVALVE FAUNA TESTIFYING TO THE LATE SAKMARIAN (EARLY PERMIAN CLIMATIC AMELIORATION ALONG THE NORTH-EASTERN GONDWANAN FRINGE.

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CRISTIANO LARGHI

2005-11-01

Full Text Available The transitional faunas of the Permian Huqf succession of Oman make it one of the key-sections for the intercalibration of Early to Middle Permian biostratigraphical scales. The abundance of fossils improved the knowledge of some marine faunas which populated the North-Eastern Gondwanan fringe during times of climatic changes in the Permian. A Sterlitamakian (upper Sakmarian, Lower Permian bivalve fauna from the Saiwan Formation in the Huqf area, informally named "Dickinsartella Fauna", is described in the present paper. The specimens examined were collected from the "Pachycyrtella Bed" (Auctorum, the basal bed of the Formation in its type locality. The Dickinsartella Fauna can be identified for the presence of the new genus Dickinsartella, which dominates the bivalve thanatocoenosis with D. pistacina sp. n. (type species. The bivalve fauna from the Pachycyrtella Bed includes the new species Stutchburia sangallii and Promytilus  mazzolenii, and also Astartella obliqua Dickins, 1963, Nuculopsis cf. bangarraensis Dickins, 1963, ?Oriocrassatella sp., and indeterminable aviculopectinids. This fauna shows a low taxonomic diversity. Nevertheless, some species are represented by a high number of generally well-preserved specimens, i.e. some specimens of S. sangallii sp. n. and A. obliqua show part of the ligament.  The good preservation of the shells permitted the microstructural analysis of D. pistacina sp. n. and S. sangallii sp. n. The microstructure of S. sangallii sp. n. supports the close phylogenetical link between modiomorphids and crassatelloids recognized by some previous authors.The new genus Dickinsartella includes the more recent species belonging to the important Paleozoic Order Cyrtodontida Scarlato & Starobogatov, 1971. The discovery of Dickinsartella gen. n. and other taxa of the Pachycyrtella Bed, present also in the Sakmarian levels of the Carnarvon and Perth Basins in Western Australia,  indicates a wider distribution of the

Biomonitoring of Pb and Cd in two impacted watersheds in Southeast Brazil, using the freshwater mussel Anodontites trapesialis (Lamarck, 1819 (Bivalvia : Mycetopodidae as a biological monitor

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Andréa C. Tomazelli

2003-12-01

Full Text Available Studies were carried out to investigate the contamination of Piracicaba and Mogi-Guaçu River basins (São Paulo State, Southeastern, Brazil for heavy metals (Cd and Pb, using the limnic bivalve Anodontites trapesialis as a biological monitor. The results showed that the concentrations of Pb were higher than the control group in both basins, showing the bioavailability of this non-essential element in the basins. The concentrations were higher in the Mogi-Guaçu than in the Piracicaba basin, and in the slightly contaminated sites in both basins. There was no correlation between the degree of human impact and Cd and Pb concentrations, it was not possible to infer about concentrations of these heavy metals in the bivalves based only in a broad evaluation of human impact.O principal objetivo deste estudo foi investigar a contaminação pelos metais pesados Cd e Pb nas bacias dos rios Piracicaba e Mogi-Guaçu (Estado de São Paulo, Brasil, utilizando o bivalve limnico Anodontites trapesialis como indicador biológico. As bacias estudadas apresentam diferentes graus de impacto, sendo a qualidade da água geralmente melhor na bacia do rio Mogi-Guaçu. Os teores de Pb detectados nos bivalves não podem ser considerados críticos, contudo, houve acúmulo em relação ao grupo de controle em ambas as bacias, especialmente na bacia do rio Mogi-Guaçu. As maiores concentrações dos elementos, especialmente Pb, foram observadas nos locais menos poluídos e na bacia menos degradada. Este fato sugere que estas concentrações não estão sendo afetadas apenas pelas atividades antrópicas nas bacias, mas deve-se considerar também fatores que afetem a biodisponibilidade ou fontes específicas e não pontuais.

Ultrasound assisted enzymatic hydrolysis for isolating titanium dioxide nanoparticles from bivalve mollusk before sp-ICP-MS.

Science.gov (United States)

Taboada-López, María Vanesa; Iglesias-López, Sara; Herbello-Hermelo, Paloma; Bermejo-Barrera, Pilar; Moreda-Piñeiro, Antonio

2018-08-14

Applicability of single-particle inductively coupled plasma mass spectrometry (sp-ICP-MS) using dwell times equal to or shorter than 100 μs has been tested for assessing titanium dioxide nanoparticles (TiO 2 NPs) in bivalve mollusks. TiO 2 NPs isolation from fresh mollusk tissues was achieved by ultrasound assisted enzymatic hydrolysis procedure using a pancreatin/lipase mixture. Optimum extraction conditions imply ultrasonication (60% amplitude) for 10 min, and 7.5 mL of a solution containing 3.0 g L -1 of pancreatin and lipase (pH 7.4). The developed method was found to be repeatable (repeatability of 17% for the over-all procedure, TiO 2 NPs concentration of 5.33 × 10 7  ± 8.89 × 10 6 , n = 11), showing a limit of detection of 5.28 × 10 6 NPs g -1 , and a limit of detection in size of 24.4-30.4 nm, based on the 3σ criteria, and on the 3σ/5 σ criteria, respectively. The analytical recovery within the 90-99% range (use of TiO 2 NPs standards of 50 nm at 7 and 14 μg L -1 as Ti). Several bivalve mollusks (clams, cockles, mussels, razor clams, oysters and variegated scallops) were analyzed for total titanium (ICP-MS after microwave assisted acid digestion), and for TiO 2 NPs by the proposed method. TiO 2 NPs concentrations were within the 2.36 × 10 7 -1.25 × 10 8 NPs g -1 range, and the most frequent sizes were from 50 to 70 nm. Copyright © 2018 Elsevier B.V. All rights reserved.

Characterization of freshwater bivalves as radio contamination (57Co, 110mAg, 134Cs) bio-indicators in a metallic multi pollution context (Cd, Zn)

International Nuclear Information System (INIS)

Fraysse, B.

2001-07-01

This study concerns freshwater bio-indicators of radio-contamination, in a metallic multi-pollution context. Metals, such as cadmium (Cd) and zinc (Zn), are widely represented in aquatic ecosystems, and their concentrations can induce physiological effects. This chronicle exposure generates both metabolic and behaviour stress of individuals, and can also yield to detoxification mechanisms induction. The main goal of this work was to estimate the influence of metals on the radionuclides ( 57 Co, 110m Ag, 134 Cs) bioaccumulation by two different bivalve species (Corbicula fluminea et Dreissena polymorpha), by studying the contamination level, the kinetic of the radionuclide transfer and the soft-body repartition. As the exploratory feature of this study, two parts have been developed: (i) testing the problematic suitability in a really bio-monitoring situation, and (ii) analysing the metal/radionuclide interaction mechanisms under controlled and standardised conditions (laboratory). For the different experimental conditions explored (laboratory and field), radionuclide bioaccumulation by freshwater bivalves has been influenced by metal exposure. This result was obtained after assessing a decrease of the organisms contamination level by radionuclide and their accumulation rate, an increase of their depuration rate and tissue and cellular repartition changes. (author)

Effect of repeated irradiation on biological characteristics of lung adenocarcinoma cell line Anip973 in vitro

International Nuclear Information System (INIS)

Xu Qingyong; Xu Xiangying; Yang Zhiwei

2008-01-01

Objective: To study the effect of repeated irradiation on biological characteristics of human lung adenocarcinoma cell line Anip973 in vitro. Methods: Anip973 cells were treated with high energy X-ray to a total dose of 60 Gy at 4 Gy fractions. The radiosensitivity of Anip973R and its parental cell were measured by clonogenic assay. The biological parameters were fitted to the single hit multitarget formula. Furthermore, the population double time(PDT) and cell cycle distribution were measured by cell growth curve and flow cytometry, respectively. Results: Comparing with its parental cell, Anip973 R acquired radioresistance showing increased D 0 , D q and SF 2 and a broader shoulder. PDT of Anip973R extended 3 h more than that of Anip973. The Anip973R also showed higher and lower percentage of cells in G 1 and S phase (P 2 /M distribution (P>0.05). Conclusions: A radioresistant lung adenocarcinoma cell line Anip973R is established by repeatedly irradiation. Its radioresistance displays obviously in lower dose area. However, its characteristic of cell cycle is not completely coincident with the classical radiobiological theory. (authors)

Ecological studies of wood-boring bivalves in the vicinity of the Oyster Creek Nuclear Generating Station. Progress report Sep-Nov 81

International Nuclear Information System (INIS)

Hoagland, K.E.; Crocket, L.

1982-06-01

The species composition, distribution, and population dynamics of wood-boring bivalves are being studied in the vicinity of the Oyster Creek Nuclear Generating Station, Barnegat Bay, New Jersey. Untreated wood test panels are used to collect organisms at 12 stations. Physiological tolerances of 3 species are also under investigation in the laboratory. Competition among the species is being analyzed. In the fall of 1981, Teredo bartschi remained in Oyster Creek despite continuous prolonged outages of the Oyster Creek Nuclear Generating Station

Hygienic characteristics of working conditions and their influence on biological age of women occupied in modern wallpaper industry

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Pichugina N.N.

2011-06-01

Full Text Available The article presents a complex sanitary characteristic of working conditions of women involved in wallpaper production. The main favorable factors of industrial environment have been determined. It is shown that working conditions in wallpaper production factories cause an increase in indices of biological age

Manganese in the shell of the bivalve Mytilus edulis: Seawater Mn or physiological control?

Science.gov (United States)

Freitas, Pedro S.; Clarke, Leon J.; Kennedy, Hilary; Richardson, Christopher A.

2016-12-01

Manganese in the shell calcite of marine bivalves has been suggested to reflect ambient seawater Mn concentrations, thus providing a high-resolution archive of past seawater Mn concentrations. However, a quantitative relationship between seawater Mn and shell Mn/Ca ratios, as well as clear understanding of which process(es) control(s) shell Mn/Ca, are still lacking. Blue mussels, Mytilus edulis, were grown in a one-year duration field experiment in the Menai Strait, U.K., to study the relationship between seawater particulate and dissolved Mn2+ concentrations and shell calcite Mn/Ca ratios. Shell Mn/Ca showed a well-defined intra-annual double-peak, with maximum values during early spring and early summer and low values during autumn and winter. Seawater particulate Mn peaked during winter and autumn, with a series of smaller peaks during spring and summer, whereas dissolved Mn2+ exhibited a marked single maximum during late-spring to early-summer, being low during the remainder of the year. Consequently, neither seawater particulate Mn nor dissolved Mn2+ concentrations explain the intra-annual variation of shell Mn/Ca ratios. A physiological control on shell Mn/Ca ratios is evident from the strong similarity and timing of the double-peaked intra-annual variations of Mn/Ca and shell growth rate (SGR), the latter corresponding to periods of increased metabolic activity (as indicated by respiration rate). It is thus likely that in M. edulis SGR influences shell Mn/Ca by altering the concentration or activity of Mn2+ within the extra-pallial fluid (EPF), by changing the flux of Mn into or the proportion of protein bound Mn within the EPF. By linking shell Mn/Ca ratios to the endogenous and environmental factors that determine growth and metabolic activity, this study helps to explain the lack of a consistent relationship between shell Mn/Ca in marine bivalve shell calcite and seawater particulate and dissolved Mn2+ concentrations. The use of Mn content from M. edulis

Genes of the mitochondrial apoptotic pathway in Mytilus galloprovincialis.

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Noelia Estévez-Calvar

Full Text Available Bivalves play vital roles in marine, brackish, freshwater and terrestrial habitats. In recent years, these ecosystems have become affected through anthropogenic activities. The ecological success of marine bivalves is based on the ability to modify their physiological functions in response to environmental changes. One of the most important mechanisms involved in adaptive responses to environmental and biological stresses is apoptosis, which has been scarcely studied in mollusks, although the final consequence of this process, DNA fragmentation, has been frequently used for pollution monitoring. Environmental stressors induce apoptosis in molluscan cells via an intrinsic pathway. Many of the proteins involved in vertebrate apoptosis have been recognized in model invertebrates; however, this process might not be universally conserved. Mytilus galloprovincialis is presented here as a new model to study the linkage between molecular mechanisms that mediate apoptosis and marine bivalve ecological adaptations. Therefore, it is strictly necessary to identify the key elements involved in bivalve apoptosis. In the present study, six mitochondrial apoptotic-related genes were characterized, and their gene expression profiles following UV irradiation were evaluated. This is the first step for the development of potential biomarkers to assess the biological responses of marine organisms to stress. The results confirmed that apoptosis and, more specifically, the expression of the genes involved in this process can be used to assess the biological responses of marine organisms to stress.

Modulation of pumping rate by two species of marine bivalve molluscs in response to neurotransmitters: Comparison of in vitro and in vivo results.

Science.gov (United States)

Frank, Dana M; Deaton, Lewis; Shumway, Sandra E; Holohan, Bridget A; Ward, J Evan

2015-07-01

Most studies regarding the neuroanatomy and neurophysiology of molluscan ctenidia have focused on isolated ctenidial tissue preparations. This study investigated how bivalve molluscs modulate their feeding rates by examining the effects of a variety of neurotransmitters, including serotonin, dopamine, and the dopamine agonist apomorphine on both isolated ctenidial tissue and in intact members of two commercially important bivalve species: the blue mussel, Mytilus edulis; and the bay scallop Argopecten irradians. In particular, we examined the effect of changes in: 1) beat of the lateral cilia (in vitro), 2) distance between ctenidial filaments and/or plicae (in vivo), and 3) diameter of the siphonal openings (in vivo) on alteration of bulk water flow through the mantle cavity. Important differences were found between isolated tissue and whole animals, and between species. Drugs that stimulated ciliary beat in vitro did not increase water processing rate in vivo. None of the treatments increased water flow through the mantle cavity of intact animals. Results suggest that A. irradians was primarily modulating lateral ciliary activity, while M. edulis appeared to have a number of ways to control water processing activity, signifying that the two species may have different compensatory and regulatory mechanisms controlling feeding activity. Copyright © 2015 Elsevier Inc. All rights reserved.

Calibration of hydroclimate proxies in freshwater bivalve shells from Central and West Africa

Science.gov (United States)

Kelemen, Zita; Gillikin, David P.; Graniero, Lauren E.; Havel, Holly; Darchambeau, François; Borges, Alberto V.; Yambélé, Athanase; Bassirou, Alhou; Bouillon, Steven

2017-07-01

Freshwater bivalve shell oxygen and carbon stable isotope ratios (δ18O, δ13C) may act as recorders of hydroclimate (e.g., precipitation-evaporation balance, discharge) and aquatic biogeochemistry. We investigate the potential of these hydroclimate proxies measured along the growth axis of shells collected from the Oubangui River (Bangui, Central African Republic) and the Niger River (Niamey, Niger). Biweekly water samples and in situ measurements collected over several years, along with daily discharge data from both sites allowed a direct comparison with proxies recorded in the shells. Data from a total of 14 unionid shells, including three species (Chambardia wissmanni, Aspatharia dahomeyensis, and Aspatharia chaiziana), confirmed that shells precipitate carbonate in oxygen isotope equilibrium with ambient water. Because water temperature variations were small, shell δ18O values (δ18Oshell) also accurately record the seasonality and the range observed in water δ18O (δ18Ow) values when calculated using an average temperature. Calculated δ18Ow values were in good agreement over the entire record of measured δ18Ow values, thus δ18Oshell records can be reliably used to reconstruct past δ18Ow values. Discharge and δ18Ow values from both rivers fit a logarithmic relationship, which was used to attempt reconstruction of past hydrological conditions, after calculating δ18Ow values from δ18Oshell values. A comparison with measured discharge data suggests that for the two rivers considered, δ18Oshell data are good proxies for recording discharge conditions during low(er) discharge levels, but that high discharge values cannot be accurately reconstructed due to the large scatter in the discharge-δ18Ow relationship. Moreover, periods of bivalve shell growth cessation due to high turbidity or air exposure should be taken into account. While δ13C values of dissolved inorganic carbon in both rivers showed clear seasonality and correlated well with discharge

Bioacessibilidade in vitro das biotoxinas marinhas ácido ocadaico, dinofisistoxina-2 e seus derivados em bivalves crus e cozinhados

OpenAIRE

Manita, Diana Filipa Pereira

2017-01-01

Dissertação de Mestrado em Segurança Alimentar As biotoxinas marinhas mais frequentes e abundantes em Portugal são as toxinas lipofílicas, nomeadamente as toxinas do grupo do ácido ocadaico (AO), que inclui as dinofisistoxinas (DTX1 e DTX2) e os seus derivados (DTX3), responsáveis pela intoxicação diarreica (DSP diarrhetic shellfish poisoning). A investigação da presença, variabilidade e transformação de biotoxinas marinhas em moluscos bivalves é de elevada importância não só p...

Biological characteristics of human-urine-derived stem cells: potential for cell-based therapy in neurology.

Science.gov (United States)

Guan, Jun-Jie; Niu, Xin; Gong, Fei-Xiang; Hu, Bin; Guo, Shang-Chun; Lou, Yuan-Lei; Zhang, Chang-Qing; Deng, Zhi-Feng; Wang, Yang

2014-07-01

Stem cells in human urine have gained attention in recent years; however, urine-derived stem cells (USCs) are far from being well elucidated. In this study, we compared the biological characteristics of USCs with adipose-derived stem cells (ASCs) and investigated whether USCs could serve as a potential cell source for neural tissue engineering. USCs were isolated from voided urine with a modified culture medium. Through a series of experiments, we examined the growth rate, surface antigens, and differentiation potential of USCs, and compared them with ASCs. USCs showed robust proliferation ability. After serial propagation, USCs retained normal karyotypes. Cell surface antigen expression of USCs was similar to ASCs. With lineage-specific induction factors, USCs could differentiate toward the osteogenic, chondrogenic, adipogenic, and neurogenic lineages. To assess the ability of USCs to survive, differentiate, and migrate, they were seeded onto hydrogel scaffold and transplanted into rat brain. The results showed that USCs were able to survive in the lesion site, migrate to other areas, and express proteins that were associated with neural phenotypes. The results of our study demonstrate that USCs possess similar biological characteristics with ASCs and have multilineage differentiation potential. Moreover USCs can differentiate to neuron-like cells in rat brain. The present study shows that USCs are a promising cell source for tissue engineering and regenerative medicine.

Interactions of cationic polystyrene nanoparticles with marine bivalve hemocytes in a physiological environment: Role of soluble hemolymph proteins

Energy Technology Data Exchange (ETDEWEB)

Canesi, Laura, E-mail: Laura.Canesi@unige.it [Dept. of Earth, Environmental and Life Sciences – DISTAV, University of Genoa (Italy); Ciacci, Caterina [Dept. of Biomolecular Sciences – DIBS, University of Urbino (Italy); Fabbri, Rita; Balbi, Teresa [Dept. of Earth, Environmental and Life Sciences – DISTAV, University of Genoa (Italy); Salis, Annalisa; Damonte, Gianluca [Centre of Excellence for Biomedical Research – CEBR, University of Genoa (Italy); Cortese, Katia [Department of Experimental Medicine – DIMES, University of Genoa (Italy); Caratto, Valentina [Dept. of Earth, Environmental and Life Sciences – DISTAV, University of Genoa (Italy); Monopoli, Marco P. [Centre for BioNanoInteractions, School of Chemistry and Chemical Biology, University College Dublin (Ireland); Department of Pharmaceutical and Medical Chemistry, Royal College of Surgeons, 123 St. Stephen Green, Dublin (Ireland); Dawson, Kenneth [Centre for BioNanoInteractions, School of Chemistry and Chemical Biology, University College Dublin (Ireland); Bergami, Elisa; Corsi, Ilaria [Dept. of Physical, Earth and Environmental Sciences, University of Siena (Italy)

2016-10-15

The bivalve Mytilus galloprovincialis has proven as a suitable model invertebrate for evaluating the potential impact of nanoparticles (NPs) in the marine environment. In particular, in mussels, the immune system represents a sensitive target for different types of NPs. In environmental conditions, both NP intrinsic properties and those of the receiving medium will affect particle behavior and consequent bioavailability/uptake/toxicity. However, the evaluation of the biological effects of NPs requires additional understanding of how, once within the organism, NPs interact at the molecular level with cells in a physiological environment. In mammalian systems, different NPs associate with serum soluble components, organized into a “protein corona”, which affects particle interactions with target cells. However, no information is available so far on the interactions of NPs with biological fluids of aquatic organisms. In this work, the influence of hemolymph serum (HS) on the in vitro effects of amino modified polystyrene NPs (PS-NH{sub 2}) on Mytilus hemocytes was investigated. Hemocytes were incubated with PS-NH{sub 2} suspensions in HS (1, 5 and 50 µg/mL) and the results were compared with those obtained in ASW medium. Cell functional parameters (lysosomal membrane stability, oxyradical production, phagocytosis) were evaluated, and morphological changes were investigated by TEM. The activation state of the signalling components involved in Mytilus immune response (p38 MAPK and PKC) was determined. The results show that in the presence of HS, PS-NH{sub 2} increased cellular damage and ROS production with respect to ASW medium. The effects were apparently mediated by disregulation of p38 MAPK signalling. The formation of a PS-NH{sub 2}-protein corona in HS was investigated by centrifugation, and 1D- gel electrophoresis and nano-HPLC-ESI-MS/MS. The results identified the Putative C1q domain containing protein (MgC1q6) as the only component of the PS-NH{sub 2} hard

Interactions of cationic polystyrene nanoparticles with marine bivalve hemocytes in a physiological environment: Role of soluble hemolymph proteins

International Nuclear Information System (INIS)

Canesi, Laura; Ciacci, Caterina; Fabbri, Rita; Balbi, Teresa; Salis, Annalisa; Damonte, Gianluca; Cortese, Katia; Caratto, Valentina; Monopoli, Marco P.; Dawson, Kenneth; Bergami, Elisa; Corsi, Ilaria

2016-01-01

The bivalve Mytilus galloprovincialis has proven as a suitable model invertebrate for evaluating the potential impact of nanoparticles (NPs) in the marine environment. In particular, in mussels, the immune system represents a sensitive target for different types of NPs. In environmental conditions, both NP intrinsic properties and those of the receiving medium will affect particle behavior and consequent bioavailability/uptake/toxicity. However, the evaluation of the biological effects of NPs requires additional understanding of how, once within the organism, NPs interact at the molecular level with cells in a physiological environment. In mammalian systems, different NPs associate with serum soluble components, organized into a “protein corona”, which affects particle interactions with target cells. However, no information is available so far on the interactions of NPs with biological fluids of aquatic organisms. In this work, the influence of hemolymph serum (HS) on the in vitro effects of amino modified polystyrene NPs (PS-NH 2 ) on Mytilus hemocytes was investigated. Hemocytes were incubated with PS-NH 2 suspensions in HS (1, 5 and 50 µg/mL) and the results were compared with those obtained in ASW medium. Cell functional parameters (lysosomal membrane stability, oxyradical production, phagocytosis) were evaluated, and morphological changes were investigated by TEM. The activation state of the signalling components involved in Mytilus immune response (p38 MAPK and PKC) was determined. The results show that in the presence of HS, PS-NH 2 increased cellular damage and ROS production with respect to ASW medium. The effects were apparently mediated by disregulation of p38 MAPK signalling. The formation of a PS-NH 2 -protein corona in HS was investigated by centrifugation, and 1D- gel electrophoresis and nano-HPLC-ESI-MS/MS. The results identified the Putative C1q domain containing protein (MgC1q6) as the only component of the PS-NH 2 hard protein corona in

Improvement of Soil Biology Characteristics at Paddy Field by System of Rice Intensification

Directory of Open Access Journals (Sweden)

Widyatmani Sih Dewi

2015-07-01

Full Text Available The aim of the research was to test the System of Rice Intensification (SRI method in improving the biological properties of paddy soil. The indicators of improvement were measured by the number of earthworm feces (cast, and the population of some microbial and nutrient content in the cast. The experiments were performed by comparing the three methods, namely: (1 SRI, (2 semi-conventional, and (3 conventional, using Randomized Completely Block Design. Each treatment was repeated nine times. The experiments were performed in the paddy fields belonging to farmers in Sukoharjo, Central Java. The result showed that the SRI (application of 1 tons ha-1 of vermicompost + 50% of inorganic fertilizer dosage tends to increase the number of earthworms cast. It is an indicator of earthworm activity in soil. Earthworms cast contains more phosphate solubilizing bacteria (12.98 x 1010cfu and N content (1.23% compared to its surrounding soil. There is a close functional relation between earthworms cast with total tiller number. SRI method is better than the other two methods to improve the biological characteristics of paddy soil that has the potential to maintain the sustainability of soil productivity.

Characteristics and evolution of the ecosystem of software tools supporting research in molecular biology.

Science.gov (United States)

Pazos, Florencio; Chagoyen, Monica

2018-01-16

Daily work in molecular biology presently depends on a large number of computational tools. An in-depth, large-scale study of that 'ecosystem' of Web tools, its characteristics, interconnectivity, patterns of usage/citation, temporal evolution and rate of decay is crucial for understanding the forces that shape it and for informing initiatives aimed at its funding, long-term maintenance and improvement. In particular, the long-term maintenance of these tools is compromised because of their specific development model. Hundreds of published studies become irreproducible de facto, as the software tools used to conduct them become unavailable. In this study, we present a large-scale survey of >5400 publications describing Web servers within the two main bibliographic resources for disseminating new software developments in molecular biology. For all these servers, we studied their citation patterns, the subjects they address, their citation networks and the temporal evolution of these factors. We also analysed how these factors affect the availability of these servers (whether they are alive). Our results show that this ecosystem of tools is highly interconnected and adapts to the 'trendy' subjects in every moment. The servers present characteristic temporal patterns of citation/usage, and there is a worrying rate of server 'death', which is influenced by factors such as the server popularity and the institutions that hosts it. These results can inform initiatives aimed at the long-term maintenance of these resources. © The Author(s) 2018. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

Correlation between mammographic findings and corresponding histopathology. Potential predictors for biological characteristics of breast diseases

International Nuclear Information System (INIS)

Tamaki, Kentaro; Ishida, Takanori; Miyashita, Minoru; Amari, Masakazu; Ohuchi, Noriaki; Tamaki, Nobumitsu; Sasano, Hironobu

2011-01-01

The present study retrospectively evaluated the mammographic findings of 606 Japanese women with breast cancer (median age 50 years; range 27-89 years) and correlated them with histopathological characteristics. Mammographic findings were evaluated with an emphasis on mass shape, margin, density, calcification, and the presence of architectural distortion; these findings were correlated with histopathological characteristics such as intrinsic subtype, histological grade, lymphovascular invasion, and the Ki-67 labeling index. An irregular mass shape and masses with a spiculated margin were significantly higher in the group of patients with luminal A breast cancer than in patients with masses that were lobular or round, or in tumors with an indistinct or microlobulated periphery (P=0.017, P=0.024, P<0.001, and P=0.001, respectively). Irregular mass shape and spiculated periphery were significantly lower in patients with Grade 3 cancer (P<0.001 for both). In terms of lymphovascular invasion, there were significant differences between oval and irregular or round mass shape (P=0.008 and P=0.034), between tumors with a microlobulated and indistinct periphery (P=0.014), between tumors with a punctate and amorphous or pleomorphic calcification shape (P=0.030 and 0.038), and between the presence and absence of architectural distortion (P=0.027). Equivalent or low-density masses were also higher in Grade 1 breast cancers (P=0.007). There were significant differences in the Ki-67 labeling index between irregular and lobular or round tumors (P<0.001 and P=0.014), as well as between spiculated and indistinct or microlobulated tumors (P<0.001 for both). Significant differences were noted in the mammographic features of different primary breast cancer subtypes. These proposed mammographic diagnostic criteria based on biological characteristics may contribute to a more accurate prediction of biological behavior of breast malignancies. (author)

Pediatric High Grade Glioma: a Review and Update on Tumor Clinical Characteristics and Biology

Energy Technology Data Exchange (ETDEWEB)

Fangusaro, Jason, E-mail: jfangusaro@luriechildrens.org [Pediatric Neuro-Oncology, The Ann & Robert H. Lurie Children’s Hospital of Chicago, Feinberg School of Medicine, Northwestern University, Chicago, IL (United States)

2012-08-24

High grade gliomas (HGG) are one of the most common central nervous system (CNS) tumors encountered in adults, but they only represent approximately 8–12% of all pediatric CNS tumors. Historically, pediatric HGG were thought to be similar to adult HGG since they appear histologically identical; however, molecular, genetic, and biologic data reveal that they are distinct. Similar to adults, pediatric HGG are very aggressive and malignant lesions with few patients achieving long-term survival despite a variety of therapies. Initial treatment strategies typically consist of a gross total resection (GTR) when feasible followed by focal radiotherapy combined with chemotherapy. Over the last few decades, a wealth of data has emerged from basic science and pre-clinical animal models helping to better define the common biologic, genetic, and molecular make-up of these tumors. These data have not only provided a better understanding of tumor biology, but they have also provided new areas of research targeting molecular and genetic pathways with the potential for novel treatment strategies and improved patient outcomes. Here we provide a review of pediatric non-brainstem HGG, including epidemiology, presentation, histology, imaging characteristics, treatments, survival outcomes, and an overview of both basic and translational research. An understanding of all relevant pre-clinical tumor models, including their strengths and pitfalls is essential in realizing improved patient outcomes in this population.

Pediatric High Grade Glioma: a Review and Update on Tumor Clinical Characteristics and Biology

International Nuclear Information System (INIS)

Fangusaro, Jason

2012-01-01

High grade gliomas (HGG) are one of the most common central nervous system (CNS) tumors encountered in adults, but they only represent approximately 8–12% of all pediatric CNS tumors. Historically, pediatric HGG were thought to be similar to adult HGG since they appear histologically identical; however, molecular, genetic, and biologic data reveal that they are distinct. Similar to adults, pediatric HGG are very aggressive and malignant lesions with few patients achieving long-term survival despite a variety of therapies. Initial treatment strategies typically consist of a gross total resection (GTR) when feasible followed by focal radiotherapy combined with chemotherapy. Over the last few decades, a wealth of data has emerged from basic science and pre-clinical animal models helping to better define the common biologic, genetic, and molecular make-up of these tumors. These data have not only provided a better understanding of tumor biology, but they have also provided new areas of research targeting molecular and genetic pathways with the potential for novel treatment strategies and improved patient outcomes. Here we provide a review of pediatric non-brainstem HGG, including epidemiology, presentation, histology, imaging characteristics, treatments, survival outcomes, and an overview of both basic and translational research. An understanding of all relevant pre-clinical tumor models, including their strengths and pitfalls is essential in realizing improved patient outcomes in this population.

"Protected biological control"- Biological pest management in the greenhouse industry

NARCIS (Netherlands)

Pilkington, L.J.; Messelink, G.J.; Lenteren, van J.C.; Mottee, Le K.

2010-01-01

This paper briefly describes the foundations and characteristics of biological control in protected cropping and what drivers are behind adoption of this management system within this industry. Examining a brief history of biological control in greenhouses and what makes it a successful management

Effects of anthropogenic sound on digging behavior, metabolism, Ca2+/Mg2+ ATPase activity, and metabolism-related gene expression of the bivalve Sinonovacula constricta

Science.gov (United States)

Peng, Chao; Zhao, Xinguo; Liu, Saixi; Shi, Wei; Han, Yu; Guo, Cheng; Jiang, Jingang; Wan, Haibo; Shen, Tiedong; Liu, Guangxu

2016-01-01

Anthropogenic sound has increased significantly in the past decade. However, only a few studies to date have investigated its effects on marine bivalves, with little known about the underlying physiological and molecular mechanisms. In the present study, the effects of different types, frequencies, and intensities of anthropogenic sounds on the digging behavior of razor clams (Sinonovacula constricta) were investigated. The results showed that variations in sound intensity induced deeper digging. Furthermore, anthropogenic sound exposure led to an alteration in the O:N ratios and the expression of ten metabolism-related genes from the glycolysis, fatty acid biosynthesis, tryptophan metabolism, and Tricarboxylic Acid Cycle (TCA cycle) pathways. Expression of all genes under investigation was induced upon exposure to anthropogenic sound at ~80 dB re 1 μPa and repressed at ~100 dB re 1 μPa sound. In addition, the activity of Ca2+/Mg2+-ATPase in the feet tissues, which is directly related to muscular contraction and subsequently to digging behavior, was also found to be affected by anthropogenic sound intensity. The findings suggest that sound may be perceived by bivalves as changes in the water particle motion and lead to the subsequent reactions detected in razor clams. PMID:27063002

Effects of anthropogenic sound on digging behavior, metabolism, Ca(2+)/Mg(2+) ATPase activity, and metabolism-related gene expression of the bivalve Sinonovacula constricta.

Science.gov (United States)

Peng, Chao; Zhao, Xinguo; Liu, Saixi; Shi, Wei; Han, Yu; Guo, Cheng; Jiang, Jingang; Wan, Haibo; Shen, Tiedong; Liu, Guangxu

2016-04-11

Anthropogenic sound has increased significantly in the past decade. However, only a few studies to date have investigated its effects on marine bivalves, with little known about the underlying physiological and molecular mechanisms. In the present study, the effects of different types, frequencies, and intensities of anthropogenic sounds on the digging behavior of razor clams (Sinonovacula constricta) were investigated. The results showed that variations in sound intensity induced deeper digging. Furthermore, anthropogenic sound exposure led to an alteration in the O:N ratios and the expression of ten metabolism-related genes from the glycolysis, fatty acid biosynthesis, tryptophan metabolism, and Tricarboxylic Acid Cycle (TCA cycle) pathways. Expression of all genes under investigation was induced upon exposure to anthropogenic sound at ~80 dB re 1 μPa and repressed at ~100 dB re 1 μPa sound. In addition, the activity of Ca(2+)/Mg(2+)-ATPase in the feet tissues, which is directly related to muscular contraction and subsequently to digging behavior, was also found to be affected by anthropogenic sound intensity. The findings suggest that sound may be perceived by bivalves as changes in the water particle motion and lead to the subsequent reactions detected in razor clams.

Effects of anthropogenic sound on digging behavior, metabolism, Ca2+/Mg2+ ATPase activity, and metabolism-related gene expression of the bivalve Sinonovacula constricta

Science.gov (United States)

Peng, Chao; Zhao, Xinguo; Liu, Saixi; Shi, Wei; Han, Yu; Guo, Cheng; Jiang, Jingang; Wan, Haibo; Shen, Tiedong; Liu, Guangxu

2016-04-01

Anthropogenic sound has increased significantly in the past decade. However, only a few studies to date have investigated its effects on marine bivalves, with little known about the underlying physiological and molecular mechanisms. In the present study, the effects of different types, frequencies, and intensities of anthropogenic sounds on the digging behavior of razor clams (Sinonovacula constricta) were investigated. The results showed that variations in sound intensity induced deeper digging. Furthermore, anthropogenic sound exposure led to an alteration in the O:N ratios and the expression of ten metabolism-related genes from the glycolysis, fatty acid biosynthesis, tryptophan metabolism, and Tricarboxylic Acid Cycle (TCA cycle) pathways. Expression of all genes under investigation was induced upon exposure to anthropogenic sound at ~80 dB re 1 μPa and repressed at ~100 dB re 1 μPa sound. In addition, the activity of Ca2+/Mg2+-ATPase in the feet tissues, which is directly related to muscular contraction and subsequently to digging behavior, was also found to be affected by anthropogenic sound intensity. The findings suggest that sound may be perceived by bivalves as changes in the water particle motion and lead to the subsequent reactions detected in razor clams.

Hypoxia and acidification have additive and synergistic negative effects on the growth, survival, and metamorphosis of early life stage bivalves.

Science.gov (United States)

Gobler, Christopher J; DePasquale, Elizabeth L; Griffith, Andrew W; Baumann, Hannes

2014-01-01

Low oxygen zones in coastal and open ocean ecosystems have expanded in recent decades, a trend that will accelerate with climatic warming. There is growing recognition that low oxygen regions of the ocean are also acidified, a condition that will intensify with rising levels of atmospheric CO2. Presently, however, the concurrent effects of low oxygen and acidification on marine organisms are largely unknown, as most prior studies of marine hypoxia have not considered pH levels. We experimentally assessed the consequences of hypoxic and acidified water for early life stage bivalves (bay scallops, Argopecten irradians, and hard clams, Mercenaria mercenaria), marine organisms of significant economic and ecological value and sensitive to climate change. In larval scallops, experimental and naturally-occurring acidification (pH, total scale  = 7.4-7.6) reduced survivorship (by >50%), low oxygen (30-50 µM) inhibited growth and metamorphosis (by >50%), and the two stressors combined produced additively negative outcomes. In early life stage clams, however, hypoxic waters led to 30% higher mortality, while acidified waters significantly reduced growth (by 60%). Later stage clams were resistant to hypoxia or acidification separately but experienced significantly (40%) reduced growth rates when exposed to both conditions simultaneously. Collectively, these findings demonstrate that the consequences of low oxygen and acidification for early life stage bivalves, and likely other marine organisms, are more severe than would be predicted by either individual stressor and thus must be considered together when assessing how ocean animals respond to these conditions both today and under future climate change scenarios.

Biological Characteristics of Caspase-14 and Its Expression in Neoplastic Diseases in the View of Translational Medicine

Directory of Open Access Journals (Sweden)

Kang-sheng LIU

2016-06-01

Full Text Available Caspase-14, a member of caspase family, only exists in mammals. As the most divergent member in the family of mammalian caspases, caspase-14 displays a variety of unique characteristics. It is expressed in a limited number of tissues and has the shortest amino acid sequence within the caspase protein family. At present, it has been found that caspase-14 is functionally different from the inflammatory reaction group of typical caspase family members. It exerts a certain effect in the promotion of final differentiation of epidermal cells and hydration of stratum corneum so as to maintain the steady state of skin barrier. In recent years, caspase-14 expression has been discovered in neoplastic diseases. Translational medicine integrates experimental research results and clinical guidance into the optimal implementation criteria for promoting the prediction, prevention and treatment of diseases. Via human genomics and molecular biology, translational medicine offers a possibility of screening molecular markers so that it can be used to diagnose the neoplastic diseases. In this article, the biological characteristics and substrates of caspase-14 as well as its expression in embryonic period and neoplastic diseases were reviewed.

Population Genetic Structure of Glycyrrhiza inflata B. (Fabaceae) Is Shaped by Habitat Fragmentation, Water Resources and Biological Characteristics.

Science.gov (United States)

Yang, Lulu; Chen, Jianjun; Hu, Weiming; Yang, Tianshun; Zhang, Yanjun; Yukiyoshi, Tamura; Zhou, Yanyang; Wang, Ying

2016-01-01

Habitat fragmentation, water resources and biological characteristics are important factors that shape the genetic structure and geographical distribution of desert plants. Analysis of the relationships between these factors and population genetic variation should help to determine the evolutionary potential and conservation strategies for genetic resources for desert plant populations. As a traditional Chinese herb, Glycyrrhiza inflata B. (Fabaceae) is restricted to the fragmented desert habitat in China and has undergone a dramatic decline due to long-term over-excavation. Determining the genetic structure of the G. inflata population and identifying a core collection could help with the development of strategies to conserve this species. We investigated the genetic variation of 25 G. inflata populations based on microsatellite markers. A high level of population genetic divergence (FST = 0.257), population bottlenecks, reduced gene flow and moderate genetic variation (HE = 0.383) were detected. The genetic distances between the populations significantly correlated with the geographical distances, and this suggests that habitat fragmentation has driven a special genetic structure of G. inflata in China through isolation by distance. STRUCTURE analysis showed that G. inflata populations were structured into three clusters and that the populations belonged to multiple water systems, which suggests that water resources were related to the genetic structure of G. inflata. In addition, the biological characteristics of the perennial species G. inflata, such as its long-lived seeds, asexual reproduction, and oasis ecology, may be related to its resistance to habitat fragmentation. A core collection of G. inflata, that included 57 accessions was further identified, which captured the main allelic diversity of G. inflata. Recent habitat fragmentation has accelerated genetic divergence. The population genetic structure of G. inflata has been shaped by habitat

Study on human-factors-engineering properties of reactor maintenance workers with protection suits, (2). Basic research on various biological characteristics in reactor maintenance simulation tests

Energy Technology Data Exchange (ETDEWEB)

Yoshino, K; Ishii, K; Nakasa, H [Central Research Inst. of Electric Power Industry, Tokyo (Japan); Shigeta, S

1980-11-01

To ensure the safety of reactor maintenance workers and to reduce the radiation exposure through the enhancement of labor efficiency, it is needed to evaluate quantitatively work-stress levels of workers with radiation-protection suits. This paper presents the results of reactor-maintenance simulation tests in which the relationship between the work stress and biological characteristics is investigated for 5 pinds of model works done by testees without protection suits in an artificial climate chamber. Major results obtained are: (1) the selected model works are mostly evaluated to be relatively heavy through the measurement of RMR (Relative Metabolic Rate). (2) biological characteristics such as heart rate and respiratory volume under the model works have close relationship to RMR which is the cumulative quantity in relatively long time, and then they may become the real-time indicator for the work stress level. (3) such biological characteristics are greatly affected by the high-temperature work-environment which is often seen in workers with protection suits.

The bivalve Anopaea (Inoceramidae) from the Upper Jurassic-lowermost Cretaceous of Mexico

Science.gov (United States)

Zell, Patrick; Crame, J. Alistair; Stinnesbeck, Wolfgang; Beckmann, Seija

2015-07-01

In Mexico, the Upper Jurassic to lowermost Cretaceous La Casita and coeval La Caja and La Pimienta formations are well-known for their abundant and well-preserved marine vertebrates and invertebrates. The latter include conspicuous inoceramid bivalves of the genus Anopaea not formally described previously from Mexico. Anopaea bassei (Lecolle de Cantú, 1967), Anopaea cf. stoliczkai (Holdhaus, 1913), Anopaea cf. callistoensis Crame and Kelly, 1995 and Anopaea sp. are rare constituents in distinctive Tithonian-lower Berriasian levels of the La Caja Formation and one Tithonian horizon of the La Pimienta Formation. Anopaea bassei was previously documented from the Tithonian of central Mexico and Cuba, while most other members of Anopaea described here are only known from southern high latitudes. The Mexican assemblage also includes taxa which closely resemble Anopaea stoliczkai from the Tithonian of India, Indonesia and the Antarctic Peninsula, and Anopaea callistoensis from the late Tithonian to ?early Berriasian of the Antarctic Peninsula. Our new data expand the palaeogeographical distribution of the high latitude Anopaea to the Gulf of Mexico region and substantiate faunal exchange, in the Late Jurassic-earliest Cretaceous, between Mexico and the Antarctic Realm.

Interactions of cationic polystyrene nanoparticles with marine bivalve hemocytes in a physiological environment: Role of soluble hemolymph proteins.

Science.gov (United States)

Canesi, Laura; Ciacci, Caterina; Fabbri, Rita; Balbi, Teresa; Salis, Annalisa; Damonte, Gianluca; Cortese, Katia; Caratto, Valentina; Monopoli, Marco P; Dawson, Kenneth; Bergami, Elisa; Corsi, Ilaria

2016-10-01

The bivalve Mytilus galloprovincialis has proven as a suitable model invertebrate for evaluating the potential impact of nanoparticles (NPs) in the marine environment. In particular, in mussels, the immune system represents a sensitive target for different types of NPs. In environmental conditions, both NP intrinsic properties and those of the receiving medium will affect particle behavior and consequent bioavailability/uptake/toxicity. However, the evaluation of the biological effects of NPs requires additional understanding of how, once within the organism, NPs interact at the molecular level with cells in a physiological environment. In mammalian systems, different NPs associate with serum soluble components, organized into a "protein corona", which affects particle interactions with target cells. However, no information is available so far on the interactions of NPs with biological fluids of aquatic organisms. In this work, the influence of hemolymph serum (HS) on the in vitro effects of amino modified polystyrene NPs (PS-NH2) on Mytilus hemocytes was investigated. Hemocytes were incubated with PS-NH2 suspensions in HS (1, 5 and 50µg/mL) and the results were compared with those obtained in ASW medium. Cell functional parameters (lysosomal membrane stability, oxyradical production, phagocytosis) were evaluated, and morphological changes were investigated by TEM. The activation state of the signalling components involved in Mytilus immune response (p38 MAPK and PKC) was determined. The results show that in the presence of HS, PS-NH2 increased cellular damage and ROS production with respect to ASW medium. The effects were apparently mediated by disregulation of p38 MAPK signalling. The formation of a PS-NH2-protein corona in HS was investigated by centrifugation, and 1D- gel electrophoresis and nano-HPLC-ESI-MS/MS. The results identified the Putative C1q domain containing protein (MgC1q6) as the only component of the PS-NH2 hard protein corona in Mytilus

Sub-chronic exposure to fluoxetine in juvenile oysters (Crassostrea gigas): uptake and biological effects.

Science.gov (United States)

Di Poi, Carole; Evariste, Lauris; Séguin, Alexis; Mottier, Antoine; Pedelucq, Julie; Lebel, Jean-Marc; Serpentini, Antoine; Budzinski, Hélène; Costil, Katherine

2016-03-01

The bioconcentration potential of fluoxetine (FLX) and its biological effects were investigated in juvenile Pacific oyster exposed for 28 days to environmentally relevant concentrations of FLX (1 ng L(-1), 100 ng L(-1) and up to 10 μg L(-1)). FLX bioaccumulated in oyster flesh resulting in 28-day bioconcentration factors greater than 2,000 and 10,000 by referring to wet and dry weights, respectively. Nevertheless, FLX did not induce oyster mortality, delayed gametogenesis, or lead to adverse histopathological alterations. At the two highest concentrations, despite non-optimal trophic conditions, FLX stimulated shell growth but only in a transient manner, suggesting a role of serotonin in the regulation of feeding and metabolism in bivalves. Those high concentrations seemed to drive bell-shaped responses of catalase and glutathione S-transferase activities throughout the exposure period, which may indicate the activation of antioxidant enzyme synthesis and then an enhanced catabolic rate or direct inhibition of those enzymes. However, no clear oxidative stress was detected because no strong differences in thiobarbituric acid-reactive substance (TBARS) content (i.e. lipid peroxidation) were observed between oyster groups, suggesting that cellular defence mechanisms were effective. These results demonstrate the importance of considering additional biomarkers of oxidative stress to obtain a comprehensive overview of the FLX-induced changes in marine bivalves exposed under realistic conditions. Considering the battery of biomarkers used, FLX appears to induce little or no effects on oyster physiology even at a concentration of 10 μg L(-1). These results do not confirm the lowest observed effect concentration (LOEC) values reported by some authors in other mollusc species.

Review of the functional morphology, biology and perturbation impacts on the boreal, habitat-forming horse mussel Modiolus modiolus (Bivalvia: Mytilidae: Modiolinae)

DEFF Research Database (Denmark)

Dinesen, Grete E.; Morton, Brian

2014-01-01

The boreal bivalve Modiolus modiolus is common subtidally where it aggregates to form extensive, long-lived, biogenic habitats with a diverse associated flora and, especially, fauna. Despite this ecological importance, M. modiolus has not been described in terms of its functional morphology and o...... several M. modiolus habitats with deleterious impacts on ecosystem functioning. Post-impact recovery times are slow and dependent on both local and mega-population distributions...... and overall biology. Modiolus modiolus is a typical epibenthic, suspension-feeding mytilid, albeit with anatomical modifications adapting it to a partially buried, gregarious lifestyle in a stable environment experiencing medium–high energy levels. The juvenile shell is covered partly in byssal setae secreted...... and locality. With age (≥ 20–45 years), shells often become deformed, particularly posteriorly and around the byssal gape, thereby increasing reproductive capacity (gonadal volume) without increasing somatic growth. Information on the biology, reproductive strategy and life history traits of M. modiolus...

Mobile Element Evolution Playing Jigsaw—SINEs in Gastropod and Bivalve Mollusks

Science.gov (United States)

Matetovici, Irina; Sajgo, Szilard; Ianc, Bianca; Ochis, Cornelia; Bulzu, Paul; Popescu, Octavian; Damert, Annette

2016-01-01

SINEs (Short INterspersed Elements) are widely distributed among eukaryotes. Some SINE families are organized in superfamilies characterized by a shared central domain. These central domains are conserved across species, classes, and even phyla. Here we report the identification of two novel such superfamilies in the genomes of gastropod and bivalve mollusks. The central conserved domain of the first superfamily is present in SINEs in Caenogastropoda and Vetigastropoda as well as in all four subclasses of Bivalvia. We designated the domain MESC (Romanian for MElc—snail and SCoica—mussel) because it appears to be restricted to snails and mussels. The second superfamily is restricted to Caenogastropoda. Its central conserved domain—Snail—is related to the Nin-DC domain. Furthermore, we provide evidence that a 40-bp subdomain of the SINE V-domain is conserved in SINEs in mollusks and arthropods. It is predicted to form a stable stem-loop structure that is preserved in the context of the overall SINE RNA secondary structure in invertebrates. Our analysis also recovered short retrotransposons with a Long INterspersed Element (LINE)-derived 5′ end. These share the body and/or the tail with transfer RNA (tRNA)-derived SINEs within and across species. Finally, we identified CORE SINEs in gastropods and bivalves—extending the distribution range of this superfamily. PMID:26739168

BIOLOGICAL CHARACTERISTICS OF SLOVAK ISOLATES OF ENTOMOPATHOGENIC FUNGUS PANDORA NEOAPHIDIS (REMAUDIÈRE ET HENNEBERT HUMBER (ZYGOMYCETES, ENTOMOPHTHORALES

Directory of Open Access Journals (Sweden)

Marek BARTA

2010-06-01

Full Text Available Intraspecific variability of biological characteristics within entomopathogenic fungus Pandora neoaphidis was evaluated. Fifteen isolates of the fungus were obtained from 5 aphid species in Slovakia. Size of conidia, conidial germination, virulence, radial growth, and biomass production were evaluated. Conidial size varied considerably with exception of isolates originating from the same host population. Conidial germination was observed on all the surfaces tested and it was greatest at saturated humidity. Virulence, daily rate of radial growth and biomass production varied depending on isolates. Isolates obtained from the same host colonies during fungal epizootics shoved also significant differences in the characteristics, what may suggest that epizootics in aphid populations are caused by associations of strains and not by prevalence of a single virulent strain.

North Atlantic Oscillation dynamics recorded in shells of a long-lived bivalve mollusk

Science.gov (United States)

Schöne, Bernd R.; Oschmann, Wolfgang; Rössler, Jochen; Freyre Castro, Antuané D.; Houk, Stephen D.; Kröncke, Ingrid; Dreyer, Wolfgang; Janssen, Ronald; Rumohr, Heye; Dunca, Elena

2003-12-01

Existing reconstructions of the winter North Atlantic Oscillation (WNAO) are based on terrestrial proxies and historical documents. No direct high-resolution, long-term rec ords from marine settings are available for this major climate-dictating phenomenon, which severely affects a variety of economic aspects of our society. Here we present a 245 yr proxy WNAO index based on shells of the long-lived marine bivalve mollusk Arctica islandica. Variations in annual rates of shell growth are positively correlated with WNAO-related changes in the food supply. Maximum amplitudes in frequency bands of 7 9 and 5 7 yr fall exactly within the range of instrumental and other proxy WNAO indices. These estimates were obtained for specimens collected live, 2000 km apart, in the central North Sea and on the Norwegian Shelf. Hence, the WNAO influences hydrographic regimes of large regions of the ocean. Our study demonstrates that A. islandica can reliably reconstruct WNAO dynamics for time intervals and regions without instrumental records. Our new tool functions as a proxy for the WNAO index prior to the twentieth-century greenhouse forcing and has the potential to further validate other proxy-based WNAO records.

Evaluation of impedance on biological Tissues using automatic control measurement system

Energy Technology Data Exchange (ETDEWEB)

Kil, Sang Hyeong; Shin, Dong Hoon; Lee, Seong Mo [Pusan National University, Yangsan (Korea, Republic of); Lee, Moo Seok; Kim, Sang Sik [Pusan National University, Busan (Korea, Republic of); Kim, Gun FDo; Lee, Jong Kyu [Pukyung National University, Busan (Korea, Republic of)

2015-08-15

Each biological tissue has endemic electrical characteristics owing to various differences such as those in cellular arrangement or organization form. The endemic electrical characteristics change when any biological change occurs. This work is a preliminary study surveying the changes in the electrical characteristics of biological tissue caused by radiation exposure. For protection against radiation hazards, therefore the electrical characteristics of living tissue were evaluated after development of the automatic control measurement system using LabVIEW. No alteration of biological tissues was observed before and after measurement of the electrical characteristics, and the biological tissues exhibited similar patterns. Through repeated measurements using the impedance/gain-phase analyzer, the coefficient of variation was determined as within 10%. The reproducibility impedance phase difference in electrical characteristics of the biological tissue did not change, and the tissue had resistance. The absolute value of impedance decreased constantly in proportion to the frequency. It has become possible to understand the electrical characteristics of biological tissues through the measurements made possible by the use of the developed.

Evaluation of impedance on biological Tissues using automatic control measurement system

International Nuclear Information System (INIS)

Kil, Sang Hyeong; Shin, Dong Hoon; Lee, Seong Mo; Lee, Moo Seok; Kim, Sang Sik; Kim, Gun FDo; Lee, Jong Kyu

2015-01-01

Each biological tissue has endemic electrical characteristics owing to various differences such as those in cellular arrangement or organization form. The endemic electrical characteristics change when any biological change occurs. This work is a preliminary study surveying the changes in the electrical characteristics of biological tissue caused by radiation exposure. For protection against radiation hazards, therefore the electrical characteristics of living tissue were evaluated after development of the automatic control measurement system using LabVIEW. No alteration of biological tissues was observed before and after measurement of the electrical characteristics, and the biological tissues exhibited similar patterns. Through repeated measurements using the impedance/gain-phase analyzer, the coefficient of variation was determined as within 10%. The reproducibility impedance phase difference in electrical characteristics of the biological tissue did not change, and the tissue had resistance. The absolute value of impedance decreased constantly in proportion to the frequency. It has become possible to understand the electrical characteristics of biological tissues through the measurements made possible by the use of the developed.

Patient Characteristics, Health Care Resource Utilization, and Costs Associated with Treatment-Regimen Failure with Biologics in the Treatment of Psoriasis.

Science.gov (United States)

Foster, Shonda A; Zhu, Baojin; Guo, Jiaying; Nikai, Enkeleida; Ojeh, Clement; Malatestinic, William; Goldblum, Orin; Kornberg, Lori J; Wu, Jashin J

2016-04-01

Psoriasis is a chronic, incurable, and immune-mediated skin disorder that is characterized by erythematous scaly papules and plaques. Understanding of psoriasis at the molecular level has led to the development of biologic agents that target disease-specific inflammatory mediators in psoriatic lesions. Biologic agents have become important components of the psoriasis armamentarium, but some patients become refractory to these agents over time or fail to respond to subsequent biologics. To (a) evaluate demographic and clinical characteristics of psoriasis patients who have treatment patterns suggestive of failure to a newly initiated biologic agent (treatment-regimen failures) compared with those who do not (non-treatment-regimen failures) and (b) to assess health care-related resource utilization and costs in non-treatment-regimen failures and treatment-regimen failures. In this retrospective observational cohort study, patients were selected from the MarketScan claims database of commercially insured individuals and individuals with Medicare supplemental insurance. The index event was a newly initiated biologic agent for the treatment of psoriasis (etanercept, adalimumab, ustekinumab, or infliximab) between January 2010 and December 2011. The analysis included psoriasis patients aged ≥ 18 years with ≥ 1 prescription claim for a biologic and continuous enrollment 12 months pre- and post-index date. Patients with claims for a biologic in the pre-index period were excluded. Patients were divided into treatment-regimen-failure and non-treatment-regimen-failure groups based on their treatment patterns post-index date. The treatment-regimen-failure group included patients who switched to another biologic, discontinued the biologic without restarting, increased the dose of the biologic, or augmented treatment with a nontopical psoriasis medication during the post-index period. Between-group patient characteristics and medication use were compared using analysis of

[Proceedings of the symposium 'Molluscan Palaeontology' : 11th International Malacological Congress, Siena (Italy) 30th August - 5th September 1992 / A.W. Janssen and R. Janssen (editors)]: The Mesozoic Marine Revolution and epifaunal bivalves

NARCIS (Netherlands)

Harper, E.M.; Skelton, P.W.

1992-01-01

The well documented dramatic increase in predation pressure which started during the early Mesozoic, termed the Mesozoic Marine Revolution (MMR), had an important impact on the evolution of prey organisms (Vermeij, 1983). Epifaunal bivalves in particular are at considerable risk to predation. In

Anatomical study on Myoforceps aristatus, an invasive boring bivalve in S.E. Brazilian coast (Mytilidae

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Luiz Ricardo L. Simone

2006-01-01

Full Text Available The bivalve Myoforceps aristatus (Dillwyn, 1817, also known as Lithophaga aristata, have been recently collected in the coasts of Rio de Janeiro and São Paulo, Brazil; a species that bores shells of other mollusks. This occurrence has been interpreted as an invasion of this species, originally from the Caribbean. The distinguishing character of the species is the posterior extensions of the shell crossing with each other. Because specimens with this character have also been collected in the Pacific Ocean, they all have been considered a single species. However, it is possible that more than one species may be involved in such worldwide distribution. With the objective of providing full information based on Atlantic specimens, a complete anatomical description is provided, which can be used in comparative studies with specimens from other oceans. Additional distinctive features of M. aristatus are the complexity of the incurrent siphon, the kidney opening widely into the supra-branchial chamber (instead of via a nephropore, and the multi-lobed auricle.O bivalve Myoforceps aristatus (Dillwyn, 1817, também conhecido como Lithophaga aristata, tem sido recentemente coletado nas costas do Rio de Janeiro e São Paulo, Brasil; uma espécie que perfura conchas de outros moluscos. Esta ocorrência está sendo interpretada como uma invasão de uma espécie originada do Caribe. O caráter distintivo da espécie é a região posterior da concha, com extensões que se cruzam. Como espécimes com esta característica também têm sido coletados no oceano Pacífico, eles tem sido considerados como pertencentes à mesma espécie. Entretanto, é possível que mais de uma espécie possam estar envolvidas nesta suposta distribuição mundial. Com o objetivo de fornecer informação completa baseada em material do Atlântico, uma descrição anatômica completa é dada, a qual pode ser usada em estudos comparativos com espécimes de outros oceanos. As caracter

Correlates of Parents' Involvement with Their Adolescent Children in Restructured and Biological Two-Parent Families: The Role of Child Characteristics

Science.gov (United States)

Flouri, Eirini

2004-01-01

This study used data from both 225 fathers and mothers as well as their secondary school age children to explore the role of child characteristics (sex, age, self-esteem, and emotional and behavioural well-being) in mother's and father's involvement in biological and restructured (stepfather) two-parent families after controlling for known…

Validation of the flow-through chamber (FTC and steady-state (SS methods for clearance rate measurements in bivalves

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Poul S. Larsen

2011-09-01

To obtain precise and reliable laboratory clearance rate (filtration rate measurements with the ‘flow-through chamber method’ (FTC the design must ensure that only inflow water reaches the bivalve's inhalant aperture and that exit flow is fully mixed. As earlier recommended these prerequisites can be checked by a plot of clearance rate (CR versus increasing through-flow (Fl to reach a plateau, which is the true CR, but we also recommend to plot percent particles cleared versus reciprocal through-flow where the plateau becomes the straight line CR/Fl, and we emphasize that the percent of particles cleared is in itself neither a criterion for valid CR measurement, nor an indicator of appropriate ‘chamber geometry’ as hitherto adapted in many studies. For the ‘steady-state method’ (SS, the design must ensure that inflow water becomes fully mixed with the bivalve's excurrent flow to establish a uniform chamber concentration prevailing at its incurrent flow and at the chamber outlet. These prerequisites can be checked by a plot of CR versus increasing Fl, which should give the true CR at all through-flows. Theoretically, the experimental uncertainty of CR for a given accuracy of concentration measurements depends on the percent reduction in particle concentration (100×P from inlet to outlet of the ideal ‘chamber geomety’. For FTC, it decreases with increasing values of P while for SS it first decreases but then increases again, suggesting the use of an intermediate value of P. In practice, the optimal value of P may depend on the given ‘chamber geometry’. The fundamental differences between the FTC and the SS methods and practical guidelines for their use are pointed out, and new data on CR for the blue mussel, Mytilus edulis, illustrate a design and use of the SS method which may be employed in e.g. long-term growth experiments at constant algal concentrations.

Sensitivity to selected contaminants in a biological early warning ...

African Journals Online (AJOL)

Several early warning systems for the monitoring of water quality are based on the assessment of valve opening/closing in bivalves. Tests were conducted to assess the sensitivity of the mussel Anodonta woodiana, installed on the Mosselmonitor, to seven contaminants and evaluate the usefulness of these sensors for ...

Spatial and temporal distribution of tributyltin (TBT) in seawater, sediments and bivalves from coastal areas of Korea during 2001-2005.

Science.gov (United States)

Choi, Minkyu; Choi, Hee-Gu; Moon, Hyo-Bang; Kim, Gui-Young

2009-04-01

Tributyltin (TBT) concentrations were determined in seawater, sediments and bivalve samples collected from Korean coastal areas during 2001-2005, to investigate the levels and temporal variation in TBT contamination in relation to the timing of the imposition of regulations on TBT use in Korea. TBT concentrations ranged from TBT were found at locations close to intensive shipping traffic and industrial complexes, and the contamination at some hot spot areas was high enough to cause harmful effects on marine organisms. TBT concentrations and their occurrence in Korean coastal waters have been decreasing annually. In particular, TBT concentrations in seawater have dramatically decreased. This result is consistent with regulations and bans on the use of TBT in Korea.

Irradiated bivalve mollusks: Use of EPR spectroscopy for identification and dosimetry

Energy Technology Data Exchange (ETDEWEB)

Alberti, Angelo, E-mail: aalberti@isof.cnr.it [CNR-ISOF, Area della Ricerca di Bologna, Via P. Gobetti 101, Bologna I-40129 (Italy); Chiaravalle, Eugenio [Istituto Zooprofilattico Sperimentale della Puglia e Basilicata, Via Manfredonia 20, Foggia I-71100 (Italy); Fuochi, Piergiorgio; Macciantelli, Dante [CNR-ISOF, Area della Ricerca di Bologna, Via P. Gobetti 101, Bologna I-40129 (Italy); Mangiacotti, Michele, E-mail: michelemangiacotti@libero.it [Istituto Zooprofilattico Sperimentale della Puglia e Basilicata, Via Manfredonia 20, Foggia I-71100 (Italy); Marchesani, Giuliana [Istituto Zooprofilattico Sperimentale della Puglia e Basilicata, Via Manfredonia 20, Foggia I-71100 (Italy); Plescia, Elena [CNR-ISOF, Area della Ricerca di Bologna, Via P. Gobetti 101, Bologna I-40129 (Italy)

2011-12-15

High energy radiation treatment of foodstuff for microbial control and shelf-life extension is being used in many countries. However, for consumer protection and information, the European Union has adopted the Directives 1999/2/EC and 1999/3/EC to harmonize the rules concerning the treatment and trade of irradiated foods in EU countries. Among the validated methods to detect irradiated foods the EU directives also include Electron Paramagnetic Resonance (EPR/ESR) spectroscopy. We describe herein the use of EPR for identification of four species of bivalve mollusks, i.e. brown Venus shells (Callista chione), clams (Tapes semidecussatus), mussels (Mytilus galloprovincialis) and oysters (Ostrea edulis) irradiated with {sup 60}Co {gamma}-rays. EPR could definitely identify irradiated seashells due to the presence of long-lived free radicals, primarily CO{sub 2}{sup -}, CO{sub 3}{sup 3-}, SO{sub 2}{sup -} and SO{sub 3}{sup -} radical anions. The presence of other organic free radicals, believed to originate from conchiolin, a scleroprotein present in the shells, was also ascertained. The use of one of these radicals as a marker for irradiation of brown Venus shells and clams can be envisaged. We also propose a dosimetric protocol for the reconstruction of the administered dose in irradiated oysters. - Highlights: > EPR spectroscopy is confirmed a valuable identification tool for irradiated mollusks. > A conchiolin-derived radical can be used as irradiation marker for some mollusks. > A reliable protocol is outlined for dose reconstruction of irradiated oysters.

Reconstructing Past Seasonal to Multicentennial-Scale Variability in the NE Atlantic Ocean Using the Long-Lived Marine Bivalve Mollusk Glycymeris glycymeris

Science.gov (United States)

Reynolds, D. J.; Hall, I. R.; Slater, S. M.; Scourse, J. D.; Halloran, P. R.; Sayer, M. D. J.

2017-11-01

The lack of long-term, highly resolved (annual to subannual) and absolutely dated baseline records of marine variability extending beyond the instrumental period (last 50-100 years) hinders our ability to develop a comprehensive understanding of the role the ocean plays in the climate system. Specifically, without such records, it remains difficult to fully quantify the range of natural climate variability mediated by the ocean and to robustly attribute recent changes to anthropogenic or natural drivers. Here we present a 211 year (1799-2010 C.E.; all dates hereafter are Common Era) seawater temperature (SWT) reconstruction from the northeast Atlantic Ocean derived from absolutely dated, annually resolved, oxygen isotope ratios recorded in the shell carbonate (δ18Oshell) of the long-lived marine bivalve mollusk Glycymeris glycymeris. The annual record was calibrated using subannually resolved δ18Oshell values drilled from multiple shells covering the instrumental period. Calibration verification statistics and spatial correlation analyses indicate that the δ18Oshell record contains significant skill at reconstructing Northeast Atlantic Ocean mean summer SWT variability associated with changes in subpolar gyre dynamics and the North Atlantic Current. Reconciling differences between the δ18Oshell data and corresponding growth increment width chronology demonstrates that 68% of the variability in G. glycymeris shell growth can be explained by the combined influence of biological productivity and SWT variability. These data suggest that G. glycymeris can provide seasonal to multicentennial absolutely dated baseline records of past marine variability that will lead to the development of a quantitative understanding of the role the marine environment plays in the global climate system.

Mussel beds are biological power stations on intertidal flats

Science.gov (United States)

Engel, Friederike G.; Alegria, Javier; Andriana, Rosyta; Donadi, Serena; Gusmao, Joao B.; van Leeuwe, Maria A.; Matthiessen, Birte; Eriksson, Britas Klemens

2017-05-01

Intertidal flats are highly productive areas that support large numbers of invertebrates, fish, and birds. Benthic diatoms are essential for the function of tidal flats. They fuel the benthic food web by forming a thin photosynthesizing compartment in the top-layer of the sediment that stretches over the vast sediment flats during low tide. However, the abundance and function of the diatom film is not homogenously distributed. Recently, we have realized the importance of bivalve reefs for structuring intertidal ecosystems; by creating structures on the intertidal flats they provide habitat, reduce hydrodynamic stress and modify the surrounding sediment conditions, which promote the abundance of associated organisms. Accordingly, field studies show that high chlorophyll a concentration in the sediment co-vary with the presence of mussel beds. Here we present conclusive evidence by a manipulative experiment that mussels increase the local biomass of benthic microalgae; and relate this to increasing biomass of microalgae as well as productivity of the biofilm across a nearby mussel bed. Our results show that the ecosystem engineering properties of mussel beds transform them into hot spots for primary production on tidal flats, highlighting the importance of biological control of sedimentary systems.

Facultative parasitism by the bivalve Kurtiella pedroana in the sand crab Emerita analoga

Science.gov (United States)

Bhaduri, Ritin; Valentich-Scott, Paul; Hilgers, Mark; Singh, Rajvir; Hickman, Mikaila; Lafferty, Kevin D.

2017-01-01

It is rare that an organism capable of independent or commensalistic existence can also become endoparasitic on a host. In this study, we documented a potential step toward parasitism in the commensal clam Kurtiella pedroana (Bivalvia: Galeommatoidea). Galeommatoideans are known commensals of various invertebrates, including crustaceans. Emerita analoga (Decapoda: Hippidae) is an abundant intertidal decapod inhabiting sandy beaches of the Pacific coast of North and South America. Crabs collected from Monterey Bay, California, were measured and examined externally and internally for associated molluscs. Out of the 520 crabs, 37 large female individuals harbored 49 bivalves (prevalence of 7.11% and mean intensity of 1.3). Forty-one ectocommensal clams were either inside the crab's branchial chambers or on their lateroventral surfaces, and were attached by byssal threads. Our key finding was eight clams that lacked byssal threads and were living in the hemocoel. These internal clams were significantly smaller than the ectocommensals. Because these internal clams lacked access to their normal food, we hypothesize they might have fed on their host's hemolymph as would a parasite. This clam species likely can't reproduce inside its host, implying that endoparasitism is a dead-end state for K. pedroana. Facultative parasitism in a free-living or an ectocommensal is uncommon and suggests a pathway to parasitism.

Assessing the effects of seawater temperature and pH on the bioaccumulation of emerging chemical contaminants in marine bivalves.

Science.gov (United States)

Maulvault, Ana Luísa; Camacho, Carolina; Barbosa, Vera; Alves, Ricardo; Anacleto, Patrícia; Fogaça, Fabiola; Kwadijk, Christiaan; Kotterman, Michiel; Cunha, Sara C; Fernandes, José O; Rasmussen, Rie R; Sloth, Jens J; Aznar-Alemany, Òscar; Eljarrat, Ethel; Barceló, Damià; Marques, António

2018-02-01

Emerging chemical contaminants [e.g. toxic metals speciation, flame retardants (FRs) and perfluorinated compounds (PFCs), among others], that have not been historically recognized as pollutants nor their toxicological hazards, are increasingly more present in the marine environment. Furthermore, the effects of environmental conditions (e.g. temperature and pH) on bioaccumulation and elimination mechanisms of these emerging contaminants in marine biota have been poorly studied until now. In this context, the aim of this study was to assess, for the first time, the effect of warmer seawater temperatures (Δ = + 4°C) and lower pH levels (Δ = - 0.4 pH units), acting alone or combined, on the bioaccumulation and elimination of emerging FRs (dechloranes 602, 603 and 604, and TBBPA), inorganic arsenic (iAs), and PFCs (PFOA and PFOS) in two estuarine bivalve species (Mytilus galloprovincialis and Ruditapes philippinarum). Overall, results showed that warming alone or combined with acidification promoted the bioaccumulation of some compounds (i.e. dechloranes 602, 604, TBBPA), but also facilitated the elimination of others (i.e. iAs, TBBPA). Similarly, lower pH also resulted in higher levels of dechloranes, as well as enhanced iAs, PFOA and PFOS elimination. Data also suggests that, when both abiotic stressors are combined, bivalves' capacity to accumulate contaminants may be time-dependent, considering significantly drastic increase observed with Dec 602 and TBBPA, during the last 10 days of exposure, when compared to reference conditions. Such changes in contaminants' bioaccumulation/elimination patterns also suggest a potential increase of human health risks of some compounds, if the climate continues changing as forecasted. Therefore, this first study pointed out the urgent need for further research on the effects of abiotic conditions on emerging contaminants kinetics, to adequately estimate the potential toxicological hazards associated to these compounds and

Molecular phylogeny of the bivalve superfamily Galeommatoidea (Heterodonta, Veneroida) reveals dynamic evolution of symbiotic lifestyle and interphylum host switching

Science.gov (United States)

2012-01-01

Background Galeommatoidea is a superfamily of bivalves that exhibits remarkably diverse lifestyles. Many members of this group live attached to the body surface or inside the burrows of other marine invertebrates, including crustaceans, holothurians, echinoids, cnidarians, sipunculans and echiurans. These symbiotic species exhibit high host specificity, commensal interactions with hosts, and extreme morphological and behavioral adaptations to symbiotic life. Host specialization to various animal groups has likely played an important role in the evolution and diversification of this bivalve group. However, the evolutionary pathway that led to their ecological diversity is not well understood, in part because of their reduced and/or highly modified morphologies that have confounded traditional taxonomy. This study elucidates the taxonomy of the Galeommatoidea and their evolutionary history of symbiotic lifestyle based on a molecular phylogenic analysis of 33 galeommatoidean and five putative galeommatoidean species belonging to 27 genera and three families using two nuclear ribosomal genes (18S and 28S ribosomal DNA) and a nuclear (histone H3) and mitochondrial (cytochrome oxidase subunit I) protein-coding genes. Results Molecular phylogeny recovered six well-supported major clades within Galeommatoidea. Symbiotic species were found in all major clades, whereas free-living species were grouped into two major clades. Species symbiotic with crustaceans, holothurians, sipunculans, and echiurans were each found in multiple major clades, suggesting that host specialization to these animal groups occurred repeatedly in Galeommatoidea. Conclusions Our results suggest that the evolutionary history of host association in Galeommatoidea has been remarkably dynamic, involving frequent host switches between different animal phyla. Such an unusual pattern of dynamic host switching is considered to have resulted from their commensalistic lifestyle, in which they maintain filter

Molecular phylogeny of the bivalve superfamily Galeommatoidea (Heterodonta, Veneroida reveals dynamic evolution of symbiotic lifestyle and interphylum host switching

Directory of Open Access Journals (Sweden)

Goto Ryutaro

2012-09-01

Full Text Available Abstract Background Galeommatoidea is a superfamily of bivalves that exhibits remarkably diverse lifestyles. Many members of this group live attached to the body surface or inside the burrows of other marine invertebrates, including crustaceans, holothurians, echinoids, cnidarians, sipunculans and echiurans. These symbiotic species exhibit high host specificity, commensal interactions with hosts, and extreme morphological and behavioral adaptations to symbiotic life. Host specialization to various animal groups has likely played an important role in the evolution and diversification of this bivalve group. However, the evolutionary pathway that led to their ecological diversity is not well understood, in part because of their reduced and/or highly modified morphologies that have confounded traditional taxonomy. This study elucidates the taxonomy of the Galeommatoidea and their evolutionary history of symbiotic lifestyle based on a molecular phylogenic analysis of 33 galeommatoidean and five putative galeommatoidean species belonging to 27 genera and three families using two nuclear ribosomal genes (18S and 28S ribosomal DNA and a nuclear (histone H3 and mitochondrial (cytochrome oxidase subunit I protein-coding genes. Results Molecular phylogeny recovered six well-supported major clades within Galeommatoidea. Symbiotic species were found in all major clades, whereas free-living species were grouped into two major clades. Species symbiotic with crustaceans, holothurians, sipunculans, and echiurans were each found in multiple major clades, suggesting that host specialization to these animal groups occurred repeatedly in Galeommatoidea. Conclusions Our results suggest that the evolutionary history of host association in Galeommatoidea has been remarkably dynamic, involving frequent host switches between different animal phyla. Such an unusual pattern of dynamic host switching is considered to have resulted from their commensalistic lifestyle, in

Dynamics of forest ecosystems regenerated on burned and harvested areas in mountain regions of Siberia: characteristics of biological diversity, structure and productivity

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I. M. Danilin

2016-12-01

Full Text Available Complex estimation of forest ecosystems dynamics based on detailing characteristics of structure, growth and productivity of the stands and describing general geographical and biological management options for preserving their biodiversity and sustaining stability are discussed in the paper by describing examples of tree stands restored on burned and logged areas in mountain regions of Siberia. On vast areas in Siberia, characterized as sub-boreal, subarid and with a strongly continental climate, forests grow on seasonally frozen soils and in many cases are surrounded by vast steppe and forest-steppe areas and uplands. Developing criteria for sustainability of mountain forest ecosystems is necessary for forest resource management and conservation. It is therefore important to obtain complex biometric characteristics on forest stands and landscapes and to thoroughly study their structure, biological diversity and productivity. Morphometric methods, Weibull simulation and allometric equations were used to determine the dimensional hierarchies of coenopopulation individuals. Structure and productivity of the aboveground stand components were also studied.

Reproductive biology characteristic of Jatropha curcas (Euphorbiaceae

Directory of Open Access Journals (Sweden)

Xiu-Rong Wang

2012-12-01

Full Text Available Jatropha curcas belongs to family of Euphorbiaceae, and is an important biological tree species for diesel production. The current descriptions of the phenotypic traits for male and female flowers are not comprehensive and there have been no reports about the process of J. curcas from pollen germination on stigma to pollen tubes conducting fertilization after entering the ovary and ovule. To assess this, experiments were undertaken to study the reproductive biology characteristic of J. curcas in Guiyang Guizhou Province, China. Floral structure and pollen germination process were described in detail and the breeding system was determined. The results showed that flower of J. curcas was both unisexual and monoecious, with a flowering phase between April-November. Both female and male flowers have five petals in contorted arrangement and five calyxes in imbricated arrangement. Female flower originated from bisexual flower finally formed unisexual flowers as the stamen ceased growth in different period. The pistil had 3-5 styles, connected at base and separated into 3-5 stigmas on the top. Each stigma had 2-4 lobes. The styles were hollow. The pollen germinated on the surface of the stigma, is then transported via the vascular tissues, which was arranged in bundles, and finally channeled through the micropyle to enter the blastula. The pollen tube was shaped in a long uneven cylinder. The top end of it became swollen and formed a small round hole for the purpose of releasing sperm nuclei while the pollen tube itself was growing and extending. Estimation of out-crossing index and artificial pollination experiments indicated that J. curcas was capable of both self-pollination and cross-pollination. The germination speed of the pollen on the stigma did not differ so much between the one by self-pollination and the one by cross-pollination, and the pollen from the two different sources could both reach the ovary within one day. Both artificial

Estuary-ocean connectivity: fast physics, slow biology.

Science.gov (United States)

Raimonet, Mélanie; Cloern, James E

2017-06-01

Estuaries are connected to both land and ocean so their physical, chemical, and biological dynamics are influenced by climate patterns over watersheds and ocean basins. We explored climate-driven oceanic variability as a source of estuarine variability by comparing monthly time series of temperature and chlorophyll-a inside San Francisco Bay with those in adjacent shelf waters of the California Current System (CCS) that are strongly responsive to wind-driven upwelling. Monthly temperature fluctuations inside and outside the Bay were synchronous, but their correlations weakened with distance from the ocean. These results illustrate how variability of coastal water temperature (and associated properties such as nitrate and oxygen) propagates into estuaries through fast water exchanges that dissipate along the estuary. Unexpectedly, there was no correlation between monthly chlorophyll-a variability inside and outside the Bay. However, at the annual scale Bay chlorophyll-a was significantly correlated with the Spring Transition Index (STI) that sets biological production supporting fish recruitment in the CCS. Wind forcing of the CCS shifted in the late 1990s when the STI advanced 40 days. This shift was followed, with lags of 1-3 years, by 3- to 19-fold increased abundances of five ocean-produced demersal fish and crustaceans and 2.5-fold increase of summer chlorophyll-a in the Bay. These changes reflect a slow biological process of estuary-ocean connectivity operating through the immigration of fish and crustaceans that prey on bivalves, reduce their grazing pressure, and allow phytoplankton biomass to build. We identified clear signals of climate-mediated oceanic variability in this estuary and discovered that the response patterns vary with the process of connectivity and the timescale of ocean variability. This result has important implications for managing nutrient inputs to estuaries connected to upwelling systems, and for assessing their responses to changing

Isolation, culture and biological characteristics of multipotent porcine skeletal muscle satellite cells.

Science.gov (United States)

Yang, Jinjuan; Liu, Hao; Wang, Kunfu; Li, Lu; Yuan, Hongyi; Liu, Xueting; Liu, Yingjie; Guan, Weijun

2017-12-01

Skeletal muscle has a huge regenerative potential for postnatal muscle growth and repair, which mainly depends on a kind of muscle progenitor cell population, called satellite cell. Nowadays, the majority of satellite cells were obtained from human, mouse, rat and other animals but rarely from pig. In this article, the porcine skeletal muscle satellite cells were isolated and cultured in vitro. The expression of surface markers of satellite cells was detected by immunofluorescence and RT-PCR assays. The differentiation capacity was assessed by inducing satellite cells into adipocytes, myoblasts and osteoblasts. The results showed that satellite cells isolated from porcine tibialis anterior were subcultured up to 12 passages and were positive for Pax7, Myod, c-Met, desmin, PCNA and NANOG but were negative for Myogenin. Satellite cells were also induced to differentiate into adipocytes, osteoblasts and myoblasts, respectively. These findings indicated that porcine satellite cells possess similar biological characteristics of stem cells, which may provide theoretical basis and experimental evidence for potential therapeutic application in the treatment of dystrophic muscle and other muscle injuries.

Can ecological history influence immunomarker responses and antioxidant enzyme activities in bivalves that have been experimentally exposed to contaminants? A new subject for discussion in "eco-immunology" studies.

Science.gov (United States)

Matozzo, Valerio; Giacomazzo, Matteo; Finos, Livio; Marin, Maria Gabriella; Bargelloni, Luca; Milan, Massimo

2013-07-01

Numerous studies have demonstrated that environmental parameters affect bivalve immunomarkers. In the present study, we tested the hypothesis that clams (Venerupis philippinarum) collected in sites with different environmental conditions respond differently to experimental contaminant exposure. Clams were collected at two sites within the Lagoon of Venice that are influenced differently by both anthropogenic impact and natural conditions: Marghera, which is characterised by relatively high contamination levels and restricted clam fishing, and Chioggia, which is inside a licensed clam culture area that is characterised by lower contamination levels. Total haemocyte count, haemocyte diameter and volume, lysozyme activity in both haemocyte lysate and cell-free haemolymph, superoxide dismutase and catalase activities in gills and digestive glands were measured at time 0 (clam sampling time), after 7 days of acclimation in the laboratory and after 1, 3 and 7 days of copper exposure. Interestingly, statistical analyses (three-way ANOVA and Canonical Correlation Analysis) revealed persistent differences in the biological responses of clams from the two sampling sites before and after copper exposure. Conversely, the influence of copper on cellular and biochemical parameters was negligible. Overall, the results obtained indicated that animals with a different ecological history respond differently to experimental contaminant exposure. In addition, this study suggested that immunomarkers and other biomarkers might be used to determine the origin of fishing products. Copyright © 2013 Elsevier Ltd. All rights reserved.

Bacteriological examination and biological characteristics of deep frozen bone preserved by gamma sterilization

International Nuclear Information System (INIS)

Pham Quang Ngoc; Le The Trung; Vo Van Thuan; Ho Minh Duc

1999-01-01

To promote the surgical success in Vietnam, we should supply bone allografts of different sizes. For this reason we have developed a standard procedure in procurement, deep freezing, packaging and radiation sterilization of massive bone. The achievement in this attempt will be briefly reported. The dose of 10-15 kGy is proved to be suitable for radiation sterilization of massive bone allografts being treated in clean condition and preserved in deep frozen. Neither deep freezing nor radiation sterilization cause any significant loss of biochemical stability of massive bone allografts especially when deep freezing combines with radiation. There were neither cross infection nor change of biological characteristics found after 6 months of storage since radiation treatment. In addition to results of the previous research and development of tissue grafts for medical care, the deep freezing radiation sterilization has been established for preservation of massive bone that is of high demand for surgery in Vietnam

Comparative Study of Biological Characteristics of Larvae, Crude and Dried Cocoon in 7 Races of Silkworm Bombyx mori L., Raised in Transylvania Area

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Emilia Maria Furdui

2010-05-01

Full Text Available 7 monovoltine races of Romanian silkworm Bombyx mori L. were breeded in specific Transylvania conditions, assuring the same microclimate conditions, being fed with the same mulberry leaves (Ukraina 107. The results obtained showed a high homogeneity, the differences were due to the variability and genotype characteristic for each individual of every race. Results and standard deviations are within the race standard. The study permitted a ierarchy of the races, following the biological characteristics, microclimate conditions, quantity, quality and breeding technology.

Polonium-210 in marine bivalves inhabiting a wedge bank region, South India

International Nuclear Information System (INIS)

Feroz Khan, M.; Godwin Wesley, S.; Rajan, M.P.

2013-01-01

Determination of background radiation dose-rate is important in the process of assessing risks to the environment from exposure to living organisms both in terms of deriving the incremental dose-rate and as a point of reference for evaluating the significance of the exposure level. In the present study, 210 Po was quantified in two species of bivalve mollusks commonly available from so called a 'wedge bank region' of southern tip of India. Based on the activity concentration in media and in the whole body, an external and internal dose rate assessment to green mussel Perna viridis and brown mussel Perna indica due to 210 Po was derived using ERICA assessment tool. The samples were collected at the intertidal region along the wedge bank region of southern tip of India during 2009 to 2010. The measurement contributes to a better knowledge of these elements, since no data exists in this region. 5-10 g of each tissue sample was wet-digested using 70% concentrated HNO 3 followed by the addition of 40% H 2 O 2 along with 20 8Po tracer (0.2 Bq). The normality of the data set was checked using Lilliefors test (ne''50) and potential outliers, if any, were tested using Walsh's test (n>60). Using the measured 210 Po activity in molluscs, sediments and seawater, dose assessment was performed using the Tier 2 ERICA environment dose assessment tool 1.0

Metals and pesticides in commercial bivalve mollusc production areas in the North and South Bays, Santa Catarina (Brazil).

Science.gov (United States)

de Souza, R V; Garbossa, L H P; Campos, C J A; Vianna, L F de N; Vanz, A; Rupp, G S

2016-04-15

Concentrations of heavy metals were quantified in mussels Perna perna and Pacific oysters Crassostrea gigas in 28 cultivation sites in the North and South Bays, SC (Brazil). Concentrations of pesticides were also quantified in these bivalve, water and sediment samples collected in 14 cultivation sites on four occasions in the period October 2012-October 2013. Pesticides were not detected in any of the mussel, oyster, water or sediment samples. The South Bay was found to be generally more contaminated with As while the North Bay showed higher concentrations of Ni. Concentrations of Pb and Cd were below the limit of detection of the method (0.5mg/kg) in all samples. Mussels accumulated more As and Ni than oysters, while the opposite was observed for Cu. Metal concentrations were below the maximum levels for foodstuffs specified in the Brazilian legislation. Copyright © 2016 Elsevier Ltd. All rights reserved.

Bivalve fouling of nuclear power plant service-water systems. Volume 2. Current status of biofouling surveillance and control techniques

International Nuclear Information System (INIS)

Daling, P.M.; Johnson, K.I.

1985-03-01

This report describes the current status of techniques for detection and control of cooling-water system fouling by bivalve mollusks at nuclear power plants. The effectiveness of these techniques is evaluated on the basis of information gathered from a literature review and in interviews with nuclear power plant personnel. Biofouling detection techniques examined in this report include regular maintenance, in-service inspection, and testing. Generally, these methods have been inadequate for detecting biofouling. Recommendations for improving biofouling detection capabilities are presented. Biofouling prevention (or control) methods that are examined in this report include intake screen systems, thermal treatment, preventive maintenance, chemical treatment alternatives, and antifoulant coatings. Recommendations for improving biofouling control methods at operating nuclear power plants are presented. Additional techniques that could be implemented at future power plants or that require further research are also described

The brackish-water bivalve Waagenoperna from the Lower Jurassic Badaowan Formation of the Junggar Basin and its palaeoenvironmental and palaeogeographic significance

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Yanhong Pan

2013-01-01

Full Text Available The brackish-water bivalve Waagenoperna Tokuyama, 1959 is reported from the Lower Jurassic Badaowan Formation at four localities, along the southern margin and western margin of the Junggar Basin. Taphonomic features recorded in the field indicate that it occurs in autochthonous or parautochthonous assemblages. The autecology of Waagenoperna therefore yields information on the palaeoenvironment of the area. The restriction of Waagenoperna to marine and brackish-water settings suggests that the sea water once reached these areas during the Sinemurian. This paper discusses the palaeogeographic implications and suggests an ingression of the sea water from the west to the western and southern part of the Junggar Basin. Additionally, the two Waagenoperna species collected from the Haojiagou section in the Junggar Basin are taxonomically documented.

Comparison of visual observation and excavation to quantify density of the endangered bivalve Unio crassus in rivers of north-eastern France

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Lamand F.

2014-04-01

Full Text Available In the context of a rapid decline in several protected unionid species, government agencies urgently require a reliable method to estimate population size for the most endangered species. We used a dataset collected from 16 river stations in north-eastern France to compare the efficiency of visual estimation (bathyscope and a manual excavation to estimate numbers of the endangered bivalve Unio crassus. Our investigations indicated that, whereas a visual approach was sufficient to detect unionid presence, only 10% of all individuals were registered compared with manual excavation at the same site. In order to obtain an accurate density estimate (especially as regards the juvenile population, sediment excavation is necessary, despite it being time consuming and damaging to the mussel’s habitat.

Effects of depuration on the element concentration in bivalves: Comparison between sympatric Ruditapes decussatus and Ruditapes philippinarum

Science.gov (United States)

Freitas, R.; Ramos Pinto, L.; Sampaio, M.; Costa, A.; Silva, M.; Rodrigues, A. M.; Quintino, V.; Figueira, E.

2012-09-01

Organisms living in coastal ecosystems are frequently subjected to anthropogenic pressures such as metals. Metals, especially those not required for metabolic activity (e.g. mercury, lead and cadmium) can be toxic even at quite low concentrations not only to organisms that accumulate them, but also to their consumers. Throughout the world, Ruditapes decussatus and Ruditapes philippinarum have been successfully commercialised for human consumption and for monitoring environmental conditions such as contamination. These two clam species share similar habitats and requirements, successfully competing both in the natural environment and in aquaculture farms. Because differences in metal accumulation may exist between R. decussatus and R. philippinarum, different risks to public health may overcome as well as distinct ecological implications. The effect of depuration on the metal burden and biochemical status of both clams species may also diverge and since the information available is subjective and scarce, the aims of the present study were to: 1) assess the total metal accumulation and intracellular partitioning, at natural conditions, in the two clam species collected at the same site; 2) evaluate the effect of depuration as a mean of reducing the levels of distinct elements, assessing also the effect of depuration time (2 and 7 days); 3) investigate the efficiency of depuration by biochemical status of the two bivalve species, evaluating changes in lipid peroxidation and activity of antioxidant enzymes catalase (CAT), superoxide dismutase (SOD) and of glutathione S-transferase (GST). Metal chelation by metallothioneins (MTs) was also determined. The results obtained showed that concentration of elements in clams was low, presenting very similar concentration levels for all elements. The present work further demonstrated that the total element concentration decreased in the shorter depuration period (2 days) and that R. decussatus and R. philippinarum partitioned

Biological applications of ultraviolet free-electron lasers

International Nuclear Information System (INIS)

Sutherland, J.C.

1997-10-01

This review examines the possibilities for biological research using the three ultraviolet free-electron lasers that are nearing operational status in the US. The projected operating characteristics of major interest in biological research of the free-electron lasers at Brookhaven National Laboratory, the Thomas Jefferson National Accelerator Facility, and Duke University are presented. Experimental applications in the areas of far- and vacuum ultraviolet photophysics and photochemistry, structural biology, environmental photobiology, and medical research are discussed and the prospects for advances in these areas, based upon the characteristics of the new ultraviolet free-electron lasers, are evaluated

Comparison of biological and genomic characteristics between a newly isolated mink enteritis parvovirus MEV-LHV and an attenuated strain MEV-L.

Science.gov (United States)

Mao, Yaping; Wang, Jigui; Hou, Qiang; Xi, Ji; Zhang, Xiaomei; Bian, Dawei; Yu, Yongle; Wang, Xi; Liu, Weiquan

2016-06-01

A virus isolated from mink showing clinical signs of enteritis was identified as a high virulent mink enteritis parvovirus (MEV) based on its biological characteristics in vivo and in vitro. Mink, challenged with this strain named MEV-LHV, exhibited severe pathological lesions as compared to those challenged with attenuated strain MEV-L. MEV-LHV also showed higher infection and replication efficiencies in vitro than MEV-L. Sequence of the complete genome of MEV-LHV was determined and analyzed in comparison with those in GenBank, which revealed that MEV-LHV shared high homology with virulent strain MEV SD12/01, whereas MEV-L was closely related to Abashiri and vaccine strain MEVB, and belonged to a different branch of the phylogenetic tree. The genomes of the two strains differed by insertions and deletions in their palindromic termini and specific unique mutations (especially VP2 300) in coding sequences which may be involved in viral replication and pathogenicity. The results of this study provide a better understanding of the biological and genomic characteristics of MEV and identify certain regions and sites that may be involved in viral replication and pathogenicity.

Biological and phylogenetic characteristics of yellow fever virus lineages from West Africa.

Science.gov (United States)

Stock, Nina K; Laraway, Hewád; Faye, Ousmane; Diallo, Mawlouth; Niedrig, Matthias; Sall, Amadou A

2013-03-01

The yellow fever virus (YFV), the first proven human-pathogenic virus, although isolated in 1927, is still a major public health problem, especially in West Africa where it causes outbreaks every year. Nevertheless, little is known about its genetic diversity and evolutionary dynamics, mainly due to a limited number of genomic sequences from wild virus isolates. In this study, we analyzed the phylogenetic relationships of 24 full-length genomes from YFV strains isolated between 1973 and 2005 in a sylvatic context of West Africa, including 14 isolates that had previously not been sequenced. By this, we confirmed genetic variability within one genotype by the identification of various YF lineages circulating in West Africa. Further analyses of the biological properties of these lineages revealed differential growth behavior in human liver and insect cells, correlating with the source of isolation and suggesting host adaptation. For one lineage, repeatedly isolated in a context of vertical transmission, specific characteristics in the growth behavior and unique mutations of the viral genome were observed and deserve further investigation to gain insight into mechanisms involved in YFV emergence and maintenance in nature.

Paradigms for biologically inspired design

DEFF Research Database (Denmark)

Lenau, T. A.; Metzea, A.-L.; Hesselberg, T.

2018-01-01

engineering, medical engineering, nanotechnology, photonics,environmental protection and agriculture. However, a major obstacle for the wider use of biologically inspired design isthe knowledge barrier that exist between the application engineers that have insight into how to design suitable productsand......Biologically inspired design is attracting increasing interest since it offers access to a huge biological repository of wellproven design principles that can be used for developing new and innovative products. Biological phenomena can inspireproduct innovation in as diverse areas as mechanical...... the biologists with detailed knowledge and experience in understanding how biological organisms function in theirenvironment. The biologically inspired design process can therefore be approached using different design paradigmsdepending on the dominant opportunities, challenges and knowledge characteristics...

Small proportions of silt linked to distinct and predictable differences in marine macrofaunal assemblages on the continental shelf of the Pacific Northwest

Science.gov (United States)

Henkel, S. K.; Politano, K. K.

2017-07-01

Increasing interest in offshore development has motivated intensified efforts to map the seafloor for marine spatial planning. However, surficial geologic maps do not accurately represent habitats for various species groups of concern. This study used a bottom-up approach to integrate macrofaunal densities and benthic conditions on the Pacific Northwest shelf to identify macrofaunal assemblages and associated habitat features. Benthic cores and water-column profiles were collected from 137 stations from 50 to 110 m depth. Analyses grouping stations based on both similar species abundances and benthic conditions resulted in six broad habitats. Within the sampled depth and latitudinal range, sediment characteristics were the primary structuring variable. A major break in assemblages was detected between sediment that had less than 1% silt/clay and those containing more than 1% silt/clay. Assemblages differed primarily in the bivalve species present and secondarily in polychaete species. Within the greater than and less than 1% silt/clay habitats, further discretization of assemblages was based mostly on differing abundances of characteristic bivalves and polychaetes associated with differing median grain sizes, which did not correspond to traditional definitions of fine or medium sand. These data show that a bottom-up methodology is necessary to discern habitats for macrofauna and that site-specific physical sampling is necessary to predict macrofaunal assemblage composition. However, if detailed sediment characteristics are known, macrofaunal assemblages may be predicted without time-intensive biological sampling and processing. These results also indicate that seemingly small sedimentary changes due to offshore installations may have measureable effects on the relative abundances and even the species composition of macrofauna.

Analyzing the Biology on the System Level

OpenAIRE

Tong, Wei

2016-01-01

Although various genome projects have provided us enormous static sequence information, understanding of the sophisticated biology continues to require integrating the computational modeling, system analysis, technology development for experiments, and quantitative experiments all together to analyze the biology architecture on various levels, which is just the origin of systems biology subject. This review discusses the object, its characteristics, and research attentions in systems biology,...

Revision of the Late Permian Non-Marine Bivalve Genus Verneuilunio Starobogatov, 1987

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M.N. Urazaeva

2015-03-01

Full Text Available The genus Verneuilunio (type species Naiadites verneuili has been singled out from the genus Palaeanodonta Amalitzky based on differences in the structure of hinge margin established using the literature data. Both genera have been included in the family Palaeanodontidae, which used to be considered by the discoverer of this genus as a subjective synonym for the family Palaeomutelidae. The revision of W. Amalitskii’s collection has demonstrated that the original diagnosis of the genus con-tains a number of inaccuracies. This creates difficulties for identification of the genus Verneuilunio and complicates its placement within higher taxa. The paper presents a revised diagnosis of the genus Verneuilunio. The detailed description of its type species is provided. The genus Verneuilunio has been assigned to the family Naiaditidae based on the duplivincular and slightly amphidetic ligament. According to this feature, the genus under study is significantly different from other unio-like Late Permian non-marine bivalve genera (Palaeomutela, Palaeanodonta, Oligodontella, and Opokiella, often occurring in the same strata. The genus Verneuilunio mostly resembles some Late Carboniferous “atypical” unio-like species of the genus Anthraconaia Trueman et Weir. Statistical processing of the biometric parameters of Verneuilunio verneuili and the species A. pruvosti, mostly resembling it, has revealed statistically significant differences in elongation of the posterior end of the shell. To date, the geographic range of the genus Verneuilunio is restricted to the central part of the East European Platform, whereas its stratigraphic range is in the lower sublayer of the Severodvinsk layer.

[Development and succession of artificial biological soil crusts and water holding characteristics of topsoil].

Science.gov (United States)

Wu, Li; Chen, Xiao-Guo; Zhang, Gao-Ke; Lan, Shu-Bin; Zhang, De-Lu; Hu, Chun-Xiang

2014-03-01

In order to understand the improving effects of cyanobacterial inoculation on water retention of topsoil in desert regions, this work focused on the development and succession of biological soil crusts and water holding characteristics of topsoil after cyanobacterial inoculation in Qubqi Desert. The results showed that after the artificial inoculation of desert cyanobacteria, algal crusts were quickly formed, and in some microenvironments direct succession of the algal crusts to moss crusts occurred after 2-3 years. With the development and succession of biological soil crusts, the topsoil biomass, polysaccharides content, crust thickness and porosity increased, while the soil bulk density decreased. At the same time, with crust development and succession, the topsoil texture became finer and the percents of fine soil particles including silt and clay contents increased, while the percents of coarse soil particles (sand content) decreased proportionately. In addition, it was found that with crust development and succession, the water holding capacity and water content of topsoil showed an increasing trend, namely: moss crust > algal crusts > shifting sand. The water content (or water holding capacity) in algal and moss crusts were 1.1-1.3 and 1.8-2.2 times of those in shifting sand, respectively. Correlation analysis showed that the water holding capacity and water content of topsoil were positively correlated with the crust biomass, polysaccharides content, thickness, bulk density, silt and clay content; while negatively correlated with the porosity and sand content. Furthermore, stepwise regression analysis showed that the main factor affecting water content was the clay content, while that affecting water holding capacity was the porosity.

[Influence of dendritic cell infiltration on prognosis and biologic characteristics of progressing gastric cancer].

Science.gov (United States)

Huang, Hai-li; Wu, Ben-yan; You, Wei-di; Shen, Ming-shi; Wang, Wen-ju

2003-09-01

To study the relation between dendritic cell (DC) infiltration and clinicopathologic parameters, biologic characteristics and prognosis of progressing gastric cancer. The development of apoptotic cell death (apoptotic index, AI) in 61 progressing gastric carcinoma tissues was analyzed by terminal deoxynucleotidyl transferase-mediated deoxyuridine triphosphate biotin nick end labeling (TUNEL) method. The PCNA labeling index (PCNA-LI), density of dendritic cells in the tumor were detected by immunohistochemical method by the LSAB kit using antibody against S-100 protein and PC-10. DC infiltration was negatively correlated with lymph node metastasis, clinical stage and PCNA-LI, but positively with AI. The DCs in gastric cancer groups with and without lymph node metastasis were (5.63 +/- 4.37)/HPF and (8.51 +/- 5.57)/HPF with difference significant (P stage lesions were (11.23 +/- 6.05)/HPF, (6.28 +/- 4.37)/HPF and (5.53 +/- 5.19)/HPF also with differences significant (P gastric carcinoma.

Effect of the alien invasive bivalve Corbicula fluminea on the nutrient dynamics under climate change scenarios

Science.gov (United States)

Coelho, J. P.; Lillebø, A. I.; Crespo, D.; Leston, S.; Dolbeth, M.

2018-05-01

The main aim of this study was to evaluate the impact of the alien invasive bivalve Corbicula fluminea (Müller, 1774) in the nutrient dynamics of temperate estuarine systems (oligohaline areas) under climate change scenarios. The scenarios simulated shifts in climatic conditions, following salinity (0 or 5) and temperature (24 or 30 °C) changes, usual during drought and heat wave events. The effect of the individual size/age (different size classes with fixed biomass) and density (various densities of <1 cm clams) on the bioturbation-associated nutrient dynamics were also evaluated under an 18-day laboratory experimental setup. Results highlight the significant effect of C. fluminea on the ecosystem nutrient dynamics, enhancing the efflux of both phosphate and dissolved inorganic nitrogen (DIN) from the sediments to the water column. Both drought and heat wave events will have an impact on the DIN dynamics within C. fluminea colonized systems, favouring a higher NH4-N efflux. The population structure of C. fluminea will have a decisive role on the impact of the species, with stronger nutrient effluxes associated with a predominantly juvenile population structure.

The Feasibility of Systems Thinking in Biology Education

Science.gov (United States)

Boersma, Kerst; Waarlo, Arend Jan; Klaassen, Kees

2011-01-01

Systems thinking in biology education is an up and coming research topic, as yet with contrasting feasibility claims. In biology education systems thinking can be understood as thinking backward and forward between concrete biological objects and processes and systems models representing systems theoretical characteristics. Some studies claim that…

Metallothionein as biomarker of mussel exposure to heavy metals

International Nuclear Information System (INIS)

Raspor, B.; Erk, M.; Pavicic, J.; Juric, D.; Kwokal, Z.; Odzak, N.

1999-01-01

The biological effect of marine pollution with heavy metals is followed in bivalves by means of the induced amount of metallothioneins (MTs), determined in different tissue types. The biological effect of the available toxic metals, cadmium and mercury, are related to the amount of MTs in the whole edible part, gills and the digestive gland of Mytilus galloprovincialis. For that purpose highly sensitive chemical and biochemical methods for metal and metallothionein content determination were developed and applied. The study was conducted in the Kastela Bay, which is the urban and industrial center of Dalmatia, Croatia, with two groups of mussels, indigenous and the transplanted. In accordance with the objective of the Symposium the results on monitoring the marine pollution by means of MTs as a biomarker, isolated from the edible, sessile and filter-feeding bivalves are discussed. (author)

The biological characteristics of anti-CD71 mouse/human chimeric antibody

International Nuclear Information System (INIS)

Wang Shuo; Jiang Lin; Lei Ping; Zhu Huifen; Shen Guanxin; Cui Wuren; Wang Yanggong

2002-01-01

Objective: To study the biological characteristics of an anti-CD71 mouse/human chimeric antibody (D2C). Methods: Analysis of the chimeric Ab production in culture supernatant was made by the standard concentration curve method with ELISA. The antibody was purified by DEAE-Sephredax-A50 ion-exchange chromatography and was confirmed by SDS-PAGE. The competition inhibition studies for binding to the same epitope on CD71 were performed between the chimeric Ab(D2C) in the culture supernatant was about 0.5-5 μg/ml in 5-day cultures when seeded at 1 x 10 5 cells/5ml compared with 12.5-25 μg/ml in the supernatant from their parental monoclonal Ab(7579). The purified chimeric Ab(D2C) from mouse ascetics was 1-2 mg/ml. The SDS-PAGE analysis of purified chimeric Ab(D2C) with discontinuous system confirmed two protein bands of 55 kDa and 25 kDa. It was clear that both chimeric Ab(D2C) and murine monoclonal Ab (7579) compete effectively to join the same epitope of CD71 each other. The chimeric antibody's affinity constant (Ka), quantitated by Scatchard analysis, is about 9.34-9.62 x 10 9 L/mol. Conclusion: The chimeric Ab(D2C) produced from the transfectomas is stable. The binding capacity of the chimeric Ab(D2C) to the antigen (CD71) was retained

Biological and physiological characteristics of Neotyphodium gansuense symbiotic with Achnatherum inebrians.

Science.gov (United States)

Li, Chunjie; Nan, Zhibiao; Li, Fei

2008-01-01

Biological and physiological characteristics of Neotyphodium gansuense were compared with Neotyphodium coenophialum and Epichloë festucae at a range of temperatures and pH values, and on carbon and nitrogen amended media. N. gansuense was able to grow at 10-30 degrees C, but not at 5 degrees C, and slowly at 35 degrees C. The optimal temperature for both N. gansuense and N. coenophialum was 25 degrees C, but that of E. festucae was 20-25 degrees C. The optimal pH ranges for mycelial growth of N. gansuense, N. coenophialum and E. festucae were 5-9, 5-9 and 5-7, respectively. The Neotyphodium and Epichloë endophytes varied in their ability to grow on media containing different carbon and nitrogen nutrients. The preference of N. gansuense for carbon source was sucrose>glucose, lactose, sorbitol, inulin, maltose, mannitol, starch, fructose>xylose. Growth of all three endophytes tested was significantly improved by peptone, tryptone, casein, yeast extract and l-proline. Yeast extract, peptone, casein, tryptone, l-proline, potassium nitrate, ammonium oxalic acid and l-leucine significantly improved growth of N. gansuense. However, ammonium nitrite was not utilized at all by any tested endophyte. N. gansuense grew significantly better on potato dextrose agar (PDA) and oat meal agar (OMA) than on corn meal agar (CMA) and drunken-horse-grass agar (DA), and most slowly on water agar (WA) and saltwater nutrient agar (SNA).

Clinical and biological characteristics of cervical neoplasias with FGFR3 mutation

Directory of Open Access Journals (Sweden)

Thiery Jean

2005-05-01

Full Text Available Abstract Background We have previously reported activating mutations of the gene coding for the fibroblast growth factor receptor 3 (FGFR3 in invasive cervical carcinoma. To further analyze the role of FGFR3 in cervical tumor progression, we extended our study to screen a total of 75 invasive tumors and 80 cervical intraepithelial neoplasias (40 low-grade and 40 high-grade lesions. Results Using single strand conformation polymorphism (SSCP followed by DNA sequencing, we found FGFR3 mutation (S249C in all cases in 5% of invasive cervical carcinomas and no mutation in intraepithelial lesions. These results suggest that, unlike in bladder carcinoma, FGFR3 mutation does not or rarely occur in non invasive lesions. Compared to patients with wildtype FGFR3 tumor, patients with S249C FGFR3 mutated tumors were older (mean age 64 vs. 49.4 years, P = 0.02, and were more likely to be associated with a non-16/18 HPV type in their tumor. Gene expression analysis demonstrated that FGFR3 mutated tumors were associated with higher FGFR3b mRNA expression levels compared to wildtype FGFR3 tumors. Supervised analysis of Affymetrix expression data identified a significant number of genes specifically differentially expressed in tumors with respect to FGFR3 mutation status. Conclusion This study suggest that tumors with FGFR3 mutation appear to have distinctive clinical and biological characteristics that may help in defining a population of patients for FGFR3 mutation screening.

Factors influencing the microplastic contamination of bivalves from the French Atlantic coast: Location, season and/or mode of life?

Science.gov (United States)

Phuong, Nam Ngoc; Poirier, Laurence; Pham, Quoc Tuan; Lagarde, Fabienne; Zalouk-Vergnoux, Aurore

2018-04-01

Monitoring the presence of microplastics (MP) in marine organisms is currently of high importance. This paper presents the qualitative and quantitative MP contamination of two bivalves from the French Atlantic coasts: the blue mussel (Mytilus edulis) and the Pacific oyster (Crassostrea gigas). Three factors potentially influencing the contamination were investigated by collecting at different sampling sites and different seasons, organisms both wild and cultivated. Inter- and intra-species comparisons were also achieved. MP quantity in organisms was evaluated at 0.61±0.56 and 2.1±1.7MP per individual respectively for mussels and oysters. Eight different polymers were identified. Most of the MPs were fragments; about a half of MPs were grey colored and a half with a size ranging from 50 to 100μm for both studied species. Some inter-specific differences were found but no evidence for sampling site, season or mode of life effect was highlighted. Copyright © 2017 Elsevier Ltd. All rights reserved.

Marine biology, intertidal ecology, and a new place for biology.

Science.gov (United States)

Benson, Keith R

2015-01-01

At the present time, there is considerable interest for the physical setting of science, that is, its actual 'place' of practice. Among historians of biology, place has been considered to be a crucial component for the study of ecology. Other historians have noted the 'built' environments (laboratories) for the study of biology along the seashore, even referring to these places in terms more applicable to vacation sites. In this paper, I examine the place of intertidal ecology investigations, both in terms of the physical space and the built space. Part of the examination will investigate the aesthetic aspect of the Pacific Coast, part will evaluate the unique character of the intertidal zone, and part will consider the construction of natural laboratories and built laboratories as characteristic places for biology.

Influence of physical and chemical characteristics of diesel fuels and exhaust emissions on biological effects of particle extracts: a multivariate statistical analysis of ten diesel fuels.

Science.gov (United States)

Sjögren, M; Li, H; Banner, C; Rafter, J; Westerholm, R; Rannug, U

1996-01-01

The emission of diesel exhaust particulates is associated with potentially severe biological effects, e.g., cancer. The aim of the present study was to apply multivariate statistical methods to identify factors that affect the biological potency of these exhausts. Ten diesel fuels were analyzed regarding physical and chemical characteristics. Particulate exhaust emissions were sampled after combustion of these fuels on two makes of heavy duty diesel engines. Particle extracts were chemically analyzed and tested for mutagenicity in the Ames test. Also, the potency of the extracts to competitively inhibit the binding of 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD) to the Ah receptor was assessed. Relationships between fuel characteristics and biological effects of the extracts were studied, using partial least squares regression (PLS). The most influential chemical fuel parameters included the contents of sulfur, certain polycyclic aromatic compounds (PAC), and naphthenes. Density and flash point were positively correlated with genotoxic potency. Cetane number and upper distillation curve points were negatively correlated with both mutagenicity and Ah receptor affinity. Between 61% and 70% of the biological response data could be explained by the measured chemical and physical factors of the fuels. By PLS modeling of extract data versus the biological response data, 66% of the genotoxicity could be explained, by 41% of the chemical variation. The most important variables, associated with both mutagenicity and Ah receptor affinity, included 1-nitropyrene, particle bound nitrate, indeno[1,2,3-cd]pyrene, and emitted mass of particles. S9-requiring mutagenicity was highly correlated with certain PAC, whereas S9-independent mutagenicity was better correlated with nitrates and 1-nitropyrene. The emission of sulfates also showed a correlation both with the emission of particles and with the biological effects. The results indicate that fuels with biologically less hazardous

Assessing therapeutic relevance of biologically interesting, ampholytic substances based on their physicochemical and spectral characteristics with chemometric tools

Science.gov (United States)

Judycka, U.; Jagiello, K.; Bober, L.; Błażejowski, J.; Puzyn, T.

2018-06-01

Chemometric tools were applied to investigate the biological behaviour of ampholytic substances in relation to their physicochemical and spectral properties. Results of the Principal Component Analysis suggest that size of molecules and their electronic and spectral characteristics are the key properties required to predict therapeutic relevance of the compounds examined. These properties were used for developing the structure-activity classification model. The classification model allows assessing the therapeutic behaviour of ampholytic substances on the basis of solely values of descriptors that can be obtained computationally. Thus, the prediction is possible without necessity of carrying out time-consuming and expensive laboratory tests, which is its main advantage.

Drag Reduction and Performance Improvement of Hydraulic Torque Converters with Multiple Biological Characteristics

Directory of Open Access Journals (Sweden)

Liu Chunbao

2016-01-01

Full Text Available Fish-like, dolphin-like, and bionic nonsmooth surfaces were employed in a hydraulic torque converter to achieve drag reduction and performance improvement, which were aimed at reducing profile loss, impacting loss and friction loss, respectively. YJSW335, a twin turbine torque converter, was bionically designed delicately. The biological characteristics consisted of fish-like blades in all four wheels, dolphin-like structure in the first turbine and the stator, and nonsmooth surfaces in the pump. The prediction performance of bionic YJSW335, obtained by computational fluid dynamics simulation, was improved compared with that of the original model, and then it could be proved that drag reduction had been achieved. The mechanism accounting for drag reduction of three factors was also investigated. After bionic design, the torque ratio and the highest efficiencies of YJSW335 were both advanced, which were very difficult to achieve through traditional design method. Moreover, the highest efficiency of the low speed area and high speed area is 85.65% and 86.32%, respectively. By economic matching analysis of the original and bionic powertrains, the latter can significantly reduce the fuel consumption and improve the operating economy of the loader.

CHARACTERISTIC FEATURES OF MUELLER MATRIX PATTERNS FOR POLARIZATION SCATTERING MODEL OF BIOLOGICAL TISSUES

Directory of Open Access Journals (Sweden)

E DU

2014-01-01

Full Text Available We developed a model to describe polarized photon scattering in biological tissues. In this model, tissues are simplified to a mixture of scatterers and surrounding medium. There are two types of scatterers in the model: solid spheres and infinitely long solid cylinders. Variables related to the scatterers include: the densities and sizes of the spheres and cylinders, the orientation and angular distribution of cylinders. Variables related to the surrounding medium include: the refractive index, absorption coefficient and birefringence. In this paper, as a development we introduce an optical activity effect to the model. By comparing experiments and Monte Carlo simulations, we analyze the backscattering Mueller matrix patterns of several tissue-like media, and summarize the different effects coming from anisotropic scattering and optical properties. In addition, we propose a possible method to extract the optical activity values for tissues. Both the experimental and simulated results show that, by analyzing the Mueller matrix patterns, the microstructure and optical properties of the medium can be obtained. The characteristic features of Mueller matrix patterns are potentially powerful tools for studying the contrast mechanisms of polarization imaging for medical diagnosis.

Biological characteristics of silver bream (Blicca bjoerkna in commercial fishery in the Kyiv reservoir

Directory of Open Access Journals (Sweden)

I. Zakharchenko

2016-12-01

Full Text Available Purpose. The determination and analysis of main biological characteristics of silver bream from the point of view of the formation and exploitation of its commercial stock in the Kyiv reservoir. Methodology. The work is based the results of monitoring field studies carried out on the Kyiv reservoir during 2012–2014. Ichthyological materials were collected from standard commercial gill nets with mesh sizes of 30–80 mm, which were set in different habitats and depths of the reservoir. Collection and processing of samples was carried out using conventional ichthyological methods adapted for the Dnieper reservoirs. Findings. According to the data of monitoring gill nets, silver bream population in 2014 was composed of 10 age groups. The majority of their population (70.8% in catches was composed of age-5 to age-7 fish, i.e. the number of modal classes increased due to the right wing of the older age groups. The frequency distribution of silver bream had a shape of a curve with wide, however broken (due to the reduction in age-5 fish peak and gradual decrease. Age-length properties, fatness parameters and condition factor of silver bream in the Kiev reservoir during last years remained on the stable high level indicating on favorable fattening conditions and forming the ichthyomass of this species. At the present time, silver bream of the Kyiv reservoir formed a commercial stock with such qualitative and quantitative characteristics, which allow exploiting it in the mode of traditional commercial harvest and specialized harvest of silver bream concentrations with the use of gill nets with mesh sizes of 50, 60 mm. Originality. We obtained and analyzed the new data on the current state of silver bream (Blіcca bjoerkna in Kyiv reservoir as an important element of commercial fish production. Practical Value. The results of the work allows increasing qualitative and quantitative characteristics of silver bream catches and will be used for the

Influence of the nucleobase on the physicochemical characteristics and biological activities of Sb{sup V}-ribonucleoside complexes

Energy Technology Data Exchange (ETDEWEB)

Ferreira, Claudio S.; Demicheli, Cynthia, E-mail: demichel@netuno.lcc.ufmg.b [Universidade Federal de Minas Gerais (UFMG), Belo Horizonte, MG (Brazil). Dept. de Quimica; Rocha, Iara C.M. da; Melo, Maria N. [Universidade Federal de Minas Gerais (UFMG), Belo Horizonte, MG (Brazil). Dept. de Parasitologia; Monte Neto, Rubens L.; Frezard, Frederic [Universidade Federal de Minas Gerais (UFMG), Belo Horizonte, MG (Brazil). Dept. de Fisiologia e Biofisica

2010-07-01

The influence of the nucleobase (uracyl, U; cytosine, C; adenine, A; guanine, G) on the physicochemical characteristics and in vitro biological activities of Sb{sup V}-ribonucleoside complexes has been investigated. The 1:1 Sb-U and Sb-C complexes were characterized by NMR and ESI-MS spectroscopies and elemental analysis. The stability constant and the apparent association and dissociation rate constants of 1:1 Sb{sup V}-U, Sb{sup V}-C and Sb{sup V}-A complexes were determined. Although Sb{sup V} most probably binds via oxygen atoms to the same 2' and 3' positions in the different nucleosides, the ribose conformational changes and the physicochemical characteristics of the complex depend on the nucleobase. The nucleobase had a strong influence on the cytotoxicity against macrophages and the antileishmanial activity of the Sb{sup V}-ribonucleoside complexes. The Sb{sup V}-purine complexes were more cytotoxic and more effective against Leishmania chagasi than the Sb{sup V}-pyrimidine complexes, supporting the model that the interaction of Sb{sup V} with purine nucleosides may mediate the antileishmanial activity of pentavalent antimonial drugs. (author)

Interactive effects of metal contamination and pathogenic organisms on the introduced marine bivalve Ruditapes philippinarum in European populations

International Nuclear Information System (INIS)

Paul-Pont, Ika; Montaudouin, Xavier de; Gonzalez, Patrice; Jude, Florence; Raymond, Natalie; Paillard, Christine; Baudrimont, Magalie

2010-01-01

In natural environment, marine organisms are concomitantly exposed to pollutants and multiple disease agents resulting in detrimental interactions. The present study evaluated interactive effects of metal contamination (cadmium) and pathogenic organisms (trematode parasites Himasthla elongata and pathogenic bacteria Vibrio tapetis) singularly and in combination on the bivalve Ruditapes philippinarum, an introduced species to Europe, under laboratory controlled conditions. After 7 days, metal bioaccumulation and pathogen load were analyzed as well as metallothionein (MT) response and hemocyte concentrations and activities. Results showed that infection by opportunistic pathogens affects metal accumulation, leading to maximal Cd accumulation in co-infected clams. Among stressors only V. tapetis induced significant effects on immune parameters whereas a particular interaction 'trematode-bacteria' was shown on MT responses. Despite low trematode infection in agreement with the resistant status of R. philippinarum to these macroparasites, significant interaction with bacteria and metal occurred. Such results highlight the necessity of taking pathogens into account in ecotoxicological studies. - Co-infection by opportunistic pathogens affects metal accumulation and some defense-related activities in the Manila clam Ruditapes philippinarum.

Interactive effects of metal contamination and pathogenic organisms on the introduced marine bivalve Ruditapes philippinarum in European populations

Energy Technology Data Exchange (ETDEWEB)

Paul-Pont, Ika, E-mail: i.paulpont@epoc.u-bordeaux1.f [Universite Bordeaux 1, UMR 5805 CNRS, Station Marine d' Arcachon, place du Dr. Peyneau, Arcachon 33120 (France); Montaudouin, Xavier de; Gonzalez, Patrice; Jude, Florence; Raymond, Natalie [Universite Bordeaux 1, UMR 5805 CNRS, Station Marine d' Arcachon, place du Dr. Peyneau, Arcachon 33120 (France); Paillard, Christine [Universite de Bretagne Occidentale-IUEM, LEMAR UMR 6539 CNRS, Place Nicolas Copernic, Technopole Brest Iroise, 29280 Plouzane (France); Baudrimont, Magalie [Universite Bordeaux 1, UMR 5805 CNRS, Station Marine d' Arcachon, place du Dr. Peyneau, Arcachon 33120 (France)

2010-11-15

In natural environment, marine organisms are concomitantly exposed to pollutants and multiple disease agents resulting in detrimental interactions. The present study evaluated interactive effects of metal contamination (cadmium) and pathogenic organisms (trematode parasites Himasthla elongata and pathogenic bacteria Vibrio tapetis) singularly and in combination on the bivalve Ruditapes philippinarum, an introduced species to Europe, under laboratory controlled conditions. After 7 days, metal bioaccumulation and pathogen load were analyzed as well as metallothionein (MT) response and hemocyte concentrations and activities. Results showed that infection by opportunistic pathogens affects metal accumulation, leading to maximal Cd accumulation in co-infected clams. Among stressors only V. tapetis induced significant effects on immune parameters whereas a particular interaction 'trematode-bacteria' was shown on MT responses. Despite low trematode infection in agreement with the resistant status of R. philippinarum to these macroparasites, significant interaction with bacteria and metal occurred. Such results highlight the necessity of taking pathogens into account in ecotoxicological studies. - Co-infection by opportunistic pathogens affects metal accumulation and some defense-related activities in the Manila clam Ruditapes philippinarum.

Characteristic responses of biological and nanoscale systems in the terahertz frequency range

Energy Technology Data Exchange (ETDEWEB)

Angeluts, A A; Balakin, A V; Evdokimov, M G; Ozheredov, I A; Sapozhnikov, D A; Solyankin, P M; Shkurinov, A P [International Laser Center, M. V. Lomonosov Moscow State University, Moscow (Russian Federation); Esaulkov, M N; Nazarov, M M [Institute on Laser and Information Technologies, Russian Academy of Sciences, Shatura, Moscow Region (Russian Federation); Cherkasova, O P [Institute of Laser Physics, Siberian Branch, Russian Academy of Sciences, Novosibirsk (Russian Federation)

2014-07-31

This paper briefly examines methods for the generation of pulsed terahertz radiation and principles of pulsed terahertz spectroscopy, an advanced informative method for studies of complex biological and nanostructured systems. Some of its practical applications are described. Using a number of steroid hormones as examples, we demonstrate that terahertz spectroscopy in combination with molecular dynamics methods and computer simulation allows one to gain information about the structure of molecules in crystals. A 'terahertz colour vision' method is proposed for analysis of pulsed terahertz signals reflected from biological tissues and it is shown that this method can be effectively used to analyse the properties of biological tissues and for early skin cancer diagnosis. (laser biophotonics)

Habitat creation and biodiversity maintenance in mangrove forests: teredinid bivalves as ecosystem engineers

Directory of Open Access Journals (Sweden)

Ian W. Hendy

2014-09-01

Full Text Available Substantial amounts of dead wood in the intertidal zone of mature mangrove forests are tunnelled by teredinid bivalves. When the tunnels are exposed, animals are able to use tunnels as refuges. In this study, the effect of teredinid tunnelling upon mangrove forest faunal diversity was investigated. Mangrove forests exposed to long emersion times had fewer teredinid tunnels in wood and wood not containing teredinid tunnels had very few species and abundance of animals. However, with a greater cross-sectional percentage surface area of teredinid tunnels, the numbers of species and abundance of animals was significantly higher. Temperatures within teredinid-attacked wood were significantly cooler compared with air temperatures, and animal abundance was greater in wood with cooler temperatures. Animals inside the tunnels within the wood may avoid desiccation by escaping the higher temperatures. Animals co-existing in teredinid tunnelled wood ranged from animals found in terrestrial ecosystems including centipedes, crickets and spiders, and animals found in subtidal marine ecosystems such as fish, octopods and polychaetes. There was also evidence of breeding within teredinid-attacked wood, as many juvenile individuals were found, and they may also benefit from the cooler wood temperatures. Teredinid tunnelled wood is a key low-tide refuge for cryptic animals, which would otherwise be exposed to fishes and birds, and higher external temperatures. This study provides evidence that teredinids are ecosystem engineers and also provides an example of a mechanism whereby mangrove forests support intertidal biodiversity and nurseries through the wood-boring activity of teredinids.

Screening and biological characteristics of fufenozide degrading bacteria

Science.gov (United States)

Xu, Chenhao; Gong, Mingfu; Guan, Qinlan; Deng, Xia; Deng, Hongyan; Huang, Jiao

2018-04-01

Fufenozide was a novel pesticide for the control of Lepidoptera pests, which was highly toxic to silkworm. Fufenozide-contaminated soil samples were collected and the bacteria that degrade fufenozide were isolated and screened by selective medium. The colony characteristics, cell characteristics and degradation characteristics in different concentrations fufenozide of the fufenozide degrading bacteria were studied. The results indicated that seven strains of fufenozide degradeing bacteria, named as DDH01, DDH03, DDH04, DDH04, DDH05, DDH07 and DDH07 respectively, were isolated from soil contaminated with fufenozide. DDH01, DDH02, DDH04 and DDH05 of seven fufenozide degrading bacteria, was gram-positive bacteria, and DDH03, DDH06 and DDH07 was gram-negative bacteria. All of seven strains of fufenozide degrading bacteria were not spores, weeks flagella, rod-shaped bacteria. DDH06 and DDH07 had capsules, and the remaining five strains had not capsule. The colonies formed by seven strains of fufenozide degradation bacteria on beef extract peptone medium plate were milky white colonies with irregular edges, thinner lawn, smaller colony with smooth surface. The growth of 7 strains of fufenozide degradation bacteria was significantly affected by the concentration of fufenozide, All of 7 strains grown in the range from 0.00025 g/mL to 1 g/mL of 10% fufenozide suspension. DDH2 was the best among the 7 strains of fufenozide degrading bacteria grown in 10% fufenozide suspension medium.

The correlation between the ultrasonic elastic strain ratio of thyroid cancer and the malignant biological characteristics of cancer cells in the lesions

OpenAIRE

Li Ma; Rong Zhou; Yun-Zhu Li

2017-01-01

Objective: To study the correlation between the ultrasonic elastic strain ratio of thyroid cancer and the malignant biological characteristics of cancer cells in the lesions. Methods: A total of 90 patients with thyroid cancer who accepted surgical treatment in our hospital between March 2015 and September 2016 were selected as the observation group, and 50 patients who received surgery in our hospital during the same period and were with clear pathological diagnosis of thyroid...

Microbial Communities in Sunken Wood Are Structured by Wood-Boring Bivalves and Location in a Submarine Canyon

Science.gov (United States)

Fagervold, Sonja K.; Romano, Chiara; Kalenitchenko, Dimitri; Borowski, Christian; Nunes-Jorge, Amandine; Martin, Daniel; Galand, Pierre E.

2014-01-01

The cornerstones of sunken wood ecosystems are microorganisms involved in cellulose degradation. These can either be free-living microorganisms in the wood matrix or symbiotic bacteria associated with wood-boring bivalves such as emblematic species of Xylophaga, the most common deep-sea woodborer. Here we use experimentally submerged pine wood, placed in and outside the Mediterranean submarine Blanes Canyon, to compare the microbial communities on the wood, in fecal pellets of Xylophaga spp. and associated with the gills of these animals. Analyses based on tag pyrosequencing of the 16S rRNA bacterial gene showed that sunken wood contained three distinct microbial communities. Wood and pellet communities were different from each other suggesting that Xylophaga spp. create new microbial niches by excreting fecal pellets into their burrows. In turn, gills of Xylophaga spp. contain potential bacterial symbionts, as illustrated by the presence of sequences closely related to symbiotic bacteria found in other wood eating marine invertebrates. Finally, we found that sunken wood communities inside the canyon were different and more diverse than the ones outside the canyon. This finding extends to the microbial world the view that submarine canyons are sites of diverse marine life. PMID:24805961

Ciliary and mucus-net filter feeding, with special reference to fluid mechanical characteristics

DEFF Research Database (Denmark)

Jørgensen, C.B.; Kiørboe, Thomas; Møhlenberg, F.

1984-01-01

feeding characterized by processing of water at low pressures (.ltoreq. 1 mm H2O). Mechanisms of water processing and particle retention in brachiopods and bivalves are compared. Laminar flow of through-currents and surface-currents in brachiopods is consistent with the hypothesis of capture of suspended...

Determination of the variability of both hydrophilic and lipophilic toxins in endemic wild bivalves and carnivorous gastropods from the southern part of Chile.

Science.gov (United States)

Zamorano, Ruben; Marín, Michelle; Cabrera, Fabiola; Figueroa, Diego; Contreras, Cristóbal; Barriga, Andrés; Lagos, Néstor; García, Carlos

2013-01-01

The aim of this study was to analyse and determine the composition of paralytic shellfish poisoning (PSP) toxins and lipophilic toxins in the Region of Aysén, Chile, in wild endemic mussels (Mytilus chilensis, Venus antiqua, Aulacomya ater, Choromytilus chorus, Tagelus dombeii and Gari solida) and in two endemic carnivorous molluscs species (Concholepas concholepas and Argobuccinum ranelliforme). PSP-toxin contents were determined by using HPLC with fluorescence detection, while lipophilic toxins were determined by using LC-MS/MS. Mean concentrations for the total of PSP toxins were in the range 55-2505 μg saxitoxin-equivalent/100 g. The two most contaminated samples for PSP toxicity were bivalve Gari solida and carnivorous Argobuccinum ranelliforme with 2505 ± 101 and 1850 ± 137 μg saxitoxin-equivalent/100 g, respectively (p < 0.05). The lipophilic toxins identified were okadaic acid, dinophysistoxin-1 (DTX-1), azaspiracid-1 (AZA-1), pectenotoxin-2 (PTX-2) and yessotoxins (YTX). All analysed molluscs contained lipophilic toxins at levels ranging from 56 ± 4.8 to 156.1 ± 8.2 μg of okadaic acid-equivalent/kg shellfish together with YTX at levels ranging from 1.0 ± 0.1 to 18 ± 0.9 μg of YTX-equivalent/kg shellfish and AZA at levels ranging from 3.6 ± 0.2 to 31 ± 2.1 μg of AZA-equivalent/kg shellfish. Furthermore, different bivalves and gastropods differ in their capacity of retention of lipophilic toxins, as shown by the determination of their respective lipophilic toxins levels. In all the evaluated species, the presence of lipophilic toxins associated with biotransformation in molluscs and carnivorous gastropods was not identified, in contrast to the identification of PSP toxins, where the profiles identified in the different species are directly related to biotransformation processes. Thus, this study provides evidence that the concentration of toxins in the food intake of the evaluated species (Bivalvia and Gastropoda class) determines the degree of

Use of a combined effect model approach for discriminating between ABCB1- and ABCC1-type efflux activities in native bivalve gill tissue

Energy Technology Data Exchange (ETDEWEB)

Faria, Melissa [Department of Environmental Chemistry, IDAEA-CSIC, Jordi Girona 18, 08034 Barcelona (Spain); CESAM & Departamento de Biologia, Universidade de Aveiro, 3810-193 Aveiro (Portugal); Pavlichenko, Vasiliy [Siberian Institute of Plant Physiology and Biochemistry, Siberian Branch of Russian Academy of Sciences (SIPPB SB RAS), Lermontov Str. 132, 664033, Irkutsk (Russian Federation); Department of Bioanalytical Ecotoxicology, UFZ — Helmholtz Centre for Environmental Research, Permoserstr. 15, D-04318 Leipzig (Germany); Burkhardt-Medicke, Kathleen [Department of Bioanalytical Ecotoxicology, UFZ — Helmholtz Centre for Environmental Research, Permoserstr. 15, D-04318 Leipzig (Germany); Institute of Hydrobiology, Dresden University of Technology, D-01062 Dresden (Germany); Soares, Amadeu M.V.M. [CESAM & Departamento de Biologia, Universidade de Aveiro, 3810-193 Aveiro (Portugal); Altenburger, Rolf [Department of Bioanalytical Ecotoxicology, UFZ — Helmholtz Centre for Environmental Research, Permoserstr. 15, D-04318 Leipzig (Germany); Barata, Carlos [Department of Environmental Chemistry, IDAEA-CSIC, Jordi Girona 18, 08034 Barcelona (Spain); Luckenbach, Till, E-mail: till.luckenbach@ufz.de [Department of Bioanalytical Ecotoxicology, UFZ — Helmholtz Centre for Environmental Research, Permoserstr. 15, D-04318 Leipzig (Germany)

2016-04-15

Aquatic organisms, such as bivalves, employ ATP binding cassette (ABC) transporters for efflux of potentially toxic chemicals. Anthropogenic water contaminants can, as chemosensitizers, disrupt efflux transporter function enabling other, putatively toxic compounds to enter the organism. Applying rapid amplification of cDNA ends (RACE) PCR we identified complete cDNAs encoding ABCB1- and ABCC1-type transporter homologs from zebra mussel providing the molecular basis for expression of both transporter types in zebra mussel gills. Further, efflux activities of both transporter types in gills were indicated with dye accumulation assays where efflux of the dye calcein-am was sensitive to both ABCB1- (reversin 205, verapamil) and ABCC1- (MK571) type specific inhibitors. The assumption that different inhibitors targeted different efflux pump types was confirmed when comparing measured effects of binary inhibitor compound mixtures in dye accumulation assays with predictions from mixture effect models. Effects by the MK571/reversin 205 mixture corresponded better with independent action, whereas reversin 205/verapamil joint effects were better predicted by the concentration addition model indicating different and equal targets, respectively. The binary mixture approach was further applied to identify the efflux pump type targeted by environmentally relevant chemosensitizing compounds. Pentachlorophenol and musk ketone, which were selected after a pre-screen of twelve compounds that previously had been identified as chemosensitizers, showed mixture effects that corresponded better with concentration addition when combined with reversine 205 but with independent action predictions when combined with MK571 indicating targeting of an ABCB1-type efflux pump by these compounds. - Highlights: • Sequences and function of ABC efflux transporters in bivalve gills were explored. • Full length Dreissena polymorpha abcb1 and abcc1 cDNA sequences were identified. • A mixture effect

Use of a combined effect model approach for discriminating between ABCB1- and ABCC1-type efflux activities in native bivalve gill tissue

International Nuclear Information System (INIS)

Faria, Melissa; Pavlichenko, Vasiliy; Burkhardt-Medicke, Kathleen; Soares, Amadeu M.V.M.; Altenburger, Rolf; Barata, Carlos; Luckenbach, Till

2016-01-01

Aquatic organisms, such as bivalves, employ ATP binding cassette (ABC) transporters for efflux of potentially toxic chemicals. Anthropogenic water contaminants can, as chemosensitizers, disrupt efflux transporter function enabling other, putatively toxic compounds to enter the organism. Applying rapid amplification of cDNA ends (RACE) PCR we identified complete cDNAs encoding ABCB1- and ABCC1-type transporter homologs from zebra mussel providing the molecular basis for expression of both transporter types in zebra mussel gills. Further, efflux activities of both transporter types in gills were indicated with dye accumulation assays where efflux of the dye calcein-am was sensitive to both ABCB1- (reversin 205, verapamil) and ABCC1- (MK571) type specific inhibitors. The assumption that different inhibitors targeted different efflux pump types was confirmed when comparing measured effects of binary inhibitor compound mixtures in dye accumulation assays with predictions from mixture effect models. Effects by the MK571/reversin 205 mixture corresponded better with independent action, whereas reversin 205/verapamil joint effects were better predicted by the concentration addition model indicating different and equal targets, respectively. The binary mixture approach was further applied to identify the efflux pump type targeted by environmentally relevant chemosensitizing compounds. Pentachlorophenol and musk ketone, which were selected after a pre-screen of twelve compounds that previously had been identified as chemosensitizers, showed mixture effects that corresponded better with concentration addition when combined with reversine 205 but with independent action predictions when combined with MK571 indicating targeting of an ABCB1-type efflux pump by these compounds. - Highlights: • Sequences and function of ABC efflux transporters in bivalve gills were explored. • Full length Dreissena polymorpha abcb1 and abcc1 cDNA sequences were identified. • A mixture effect

Biologically controlled minerals as potential indicators of life

Science.gov (United States)

Schwartz, D. E.; Mancinelli, R. L.; Kaneshiro, E.

1991-01-01

Minerals can be produced and deposited either by abiotic or biologic means. Regardless of their origin, mineral crystals reflect the environment conditions (e.g., temperature, pressure, chemical composition, and redox potential) present during crystal formation. Biologically-produced mineral crystals are grown or reworked under the control of their host organism and reflect an environment different from the abiotic environment. In addition, minerals of either biologic or abiotic origin have great longevities. For these reasons, biologically produced minerals have been proposed as biomarkers. Biomarkers are key morphological, chemical, and isotopic signatures of living systems that can be used to determine if life processes have occurred. Studies of biologically controlled minerals produced by the protist, Paramecium tetraurelia, were initiated since techniques have already been developed to culture them and isolate their crystalline material, and methods are already in place to analyze this material. Two direct crystalline phases were identified. One phase, whose chemical composition is high in Mg, was identified as struvite. The second phase, whose chemical composition is high in Ca, has not been previously found occurring naturally and may be considered a newly discovered material. Analyses are underway to determine the characteristics of these minerals in order to compare them with characteristics of these minerals in order to compare them with characteristics of minerals formed abiotically, but with the same chemical composition.

SURVEY ON V. CHOLERAE, V. VULNIFICUS AND V. PARAHAEMOLYTICUS IN BIVALVE MOLLUSCS OF THE ADRIATIC SEA AND PROPOSAL OF AN ANALYTICAL PROTOCOL

Directory of Open Access Journals (Sweden)

M.L. Valeri

2009-06-01

Full Text Available Bivalve molluscs from Adriatic sea were analyzed for V. parahaemolyticus, V. cholerae e V. vulnificus presence. The isolates on TCBS Agar and m-CPC Agar were selected on the basis of a new biochemical screening, that showed a good performance, because among 2344 strains from primary culture only 237 (10% were presumptively assigned to the species of interest. The PCR analyses was performed for the target genes toxR hlyA, ctxA, tcpI (V. cholerae, toxR, tl, tdh, trh (V. parahaemolyticus, vvhA and viuB (V. vulnificus. Among the 9 strains confirmed to belong to V. parahaemolyticus specie, 6 were sucrose positive. On 215 samples of molluscs only 5 resulted positive for V. parahaemolyticus being toxR+, tl+, although non pathogenic (tdh-, trh-, and none for V. cholerae e V. vulnificus.

On the Cultivation of Students' Interests in Biology Teaching

Science.gov (United States)

Li, Yan

2011-01-01

This paper introduces the importance of middle school students' interests in learning biology. Considering the psychological characteristics of middle school students, this paper suggests several practical ways for inspiring students' interests in learning biology.

Application of nanotechnology in biology and promising application in radiobiology

International Nuclear Information System (INIS)

Zhao Sanhu; Ni Jin; Cai Jianming

2011-01-01

As one of the 21-Century high and new technologies, nanotechnology (NT) has been widely applied in all aspects of biology. From now on, it has been used for detecting substance, carrying drug, antibacterial and tumour therapy by its photometric characteristics, mechanics characteristics, thermal property and other characteristics. Because of the unique advantages of nanoparticles, nanotechnology has great potential in radioprotection. In this article, we introduced the application of nanotechnology in modern biology and the primal problems. Meantime, we explain the prospect of its application in radioprotection. (authors)

Oyster reef restoration in controlling coastal pollution around India: A viewpoint

Digital Repository Service at National Institute of Oceanography (India)

Chakraborty, P.

.G., Pirie, B.J.S., Cheyne, A.R., Coombs, T.L. and Grant, P.T., 1978. Detoxication of metals by marine bivalves: an ultrastructural study of the compartmentation of copper and zinc in the oyster Ostreaedulis. Marine Biology, 45(2), pp.147-156. Gupta, R...

Population structure, biomass and production of the West African lucinid Keletistes rhizoecus (Bivalvia, Mollusca) in Sivibilagbara swamp at Bodo Creek, Niger Delta, Nigeria

NARCIS (Netherlands)

Zabbey, N.; Hart, A. I.; Wolff, W. J.

2010-01-01

The West African lucinid bivalve Keletistes rhizoecus (Oliver, Basteria 50:47-64, 1986) is only known from the Niger Delta in Nigeria. Due to inaccessibility of its habitat population biology, growth parameters, biomass, and annual secondary production are unknown. The danger of oil pollution

Are Mussels Always the Best Bioindicators? Comparative Study on Biochemical Responses of Three Marine Invertebrate Species to Chronic Port Pollution.

Science.gov (United States)

Laitano, María V; Fernández-Gimenez, Analía V

2016-07-01

Bivalves have traditionally been considered good bioindicators due to their sensitivity to pollution, among other features. This characteristic is shared by several other non-bivalve species as well, though studies in this respect remain scarce. This work aims to compare biomarker sensitivity to chronic port pollution among three intertidal invertebrate species with good bioindicator characteristics. Mussels' immunological (phenoloxidase and peroxidases) and biotransformation (glutathione-S-transferase) responses were contrasted against those of limpets and barnacles. The three species under study evidenced activity of all the enzymes measured, although with differences. Barnacle Balanus glandula was the most sensitive species showing pollution modulation of the three enzymes, which suggests that mussels would not always be the best bioindicator species among marine invertebrates depending on the responses that are assessed.

Assessment of variable application rates of biological amendment ...

African Journals Online (AJOL)

Assessment of variable application rates of biological amendment substances on establishment and growth characteristics of maize plants. ... Hence, a greenhouse experiment was conducted in 2008 to assess the effects of variable rates (50, 75 and 100% of the recommended rates) of industrial manufactured biological ...

Prevalence of human pathogenic enteric viruses in bivalve molluscan shellfish and cultured shrimp in south west coast of India.

Science.gov (United States)

Umesha, Kanasinakatte R; Bhavani, Naniah C; Venugopal, Moleyur N; Karunasagar, Indrani; Krohne, Georg; Karunasagar, Iddya

2008-03-20

The prevalence of human enteric viruses in bivalve molluscan shellfish and shrimp collected off the south west coast of India was studied to assess the extent of fecal pollution of coastal environment. Out of 194 samples analyzed, 37% of oyster, 46% of clam and 15% of shrimp samples were positive for enteroviruses (EV). Adenoviruses (ADV) were detected in 17% of oyster and 27% of clam samples. However, other enteric viruses such as noroviruses (NoV) and hepatitis A virus (HAV) were not detected in any of the samples. High prevalence of EV and ADV was noticed between May to December. Thirty four percent of oyster and 49% of clam samples showed fecal coliform values higher than the limit. MS-2 phage was detected in 57% of oyster and 73% of clam samples. The presence of MS-2 phage and human enteric viruses showed association while fecal coliforms and enteric viruses showed no association. However, 17 samples, which were positive for enteric viruses (EV and ADV), were negative for MS-2 phage.

Different therapeutic effects of cells derived from human amniotic membrane on premature ovarian aging depend on distinct cellular biological characteristics.

Science.gov (United States)

Ding, Chenyue; Li, Hong; Wang, Yun; Wang, Fuxin; Wu, Huihua; Chen, Rulei; Lv, Jinghuan; Wang, Wei; Huang, Boxian

2017-07-27

Many reports have shown that various kinds of stem cells have the ability to recover premature ovarian aging (POA) function. Transplantation of human amniotic epithelial cells (hAECs) improves ovarian function damaged by chemotherapy in a mice model. Understanding of how to evaluate the distinct effects of adult stem cells in curing POA and how to choose stem cells in clinical application is lacking. To build a different degrees of POA model, mice were administered different doses of cyclophosphamide: light dose (70 mg/kg, 2 weeks), medium dose (70 mg/kg, 1 week; 120 mg/kg, 1 week), and high dose (120 mg/kg, 2 weeks). Enzyme-linked immunosorbent assay detected serum levels of sex hormones, and hematoxylin and eosin staining allowed follicle counting and showed the ovarian tissue structure. DiIC 18 (5)-DS was employed to label human amniotic mesenchymal stem cells (hAMSCs) and hAECs for detecting the cellular retention time in ovaries by a live imaging system. Proliferation of human ovarian granule cells (ki67, AMH, FSHR, FOXL2, and CYP19A1) and immunological rejection of human peripheral blood mononuclear cells (CD4, CD11b, CD19, and CD56) were measured by flow cytometry (fluorescence-activated cell sorting (FACS)). Distinction of cellular biological characteristics between hAECs and hAMSCs was evaluated, such as collagen secretory level (collagen I, II, III, IV, and VI), telomerase activity, pluripotent markers tested by western blot, expression level of immune molecules (HLA-ABC and HLA-DR) analyzed by FACS, and cytokines (growth factors, chemotactic factors, apoptosis factors, and inflammatory factors) measured by a protein antibody array methodology. After hAMSCs and hAECs were transplanted into a different degrees of POA model, hAMSCs exerted better therapeutic activity on mouse ovarian function in the high-dose administration group, promoting the proliferation rate of ovarian granular cells from premature ovarian failure patients, but also provoking immune

Chemical and biological characteristics of Albion reef in the South ...

African Journals Online (AJOL)

The role of heterotrophic bacteria, pico-cyanobacteria and benthic cyanobacterial mats was assessed in the cycling of organic carbon and nitrogen in the Albion lagoon, Mauritius. Surveys and sampling for biological and chemical parameters were undertaken at three locations along one northern (T1) and one southern ...

Synthetic biology and its alternatives. Descartes, Kant and the idea of engineering biological machines.

Science.gov (United States)

Kogge, Werner; Richter, Michael

2013-06-01

The engineering-based approach of synthetic biology is characterized by an assumption that 'engineering by design' enables the construction of 'living machines'. These 'machines', as biological machines, are expected to display certain properties of life, such as adapting to changing environments and acting in a situated way. This paper proposes that a tension exists between the expectations placed on biological artefacts and the notion of producing such systems by means of engineering; this tension makes it seem implausible that biological systems, especially those with properties characteristic of living beings, can in fact be produced using the specific methods of engineering. We do not claim that engineering techniques have nothing to contribute to the biotechnological construction of biological artefacts. However, drawing on Descartes's and Kant's thinking on the relationship between the organism and the machine, we show that it is considerably more plausible to assume that distinctively biological artefacts emerge within a paradigm different from the paradigm of the Cartesian machine that underlies the engineering approach. We close by calling for increased attention to be paid to approaches within molecular biology and chemistry that rest on conceptions different from those of synthetic biology's engineering paradigm. Copyright © 2013 Elsevier Ltd. All rights reserved.

Cephalic and Limb Anatomy of a New Isoxyid from the Burgess Shale and the Role of “Stem Bivalved Arthropods” in the Disparity of the Frontalmost Appendage

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Aria, Cédric; Caron, Jean-Bernard

2015-01-01

We herein describe Surusicaris elegans gen. et sp. nov. (in Isoxyidae, amended), a middle (Series 3, Stage 5) Cambrian bivalved arthropod from the new Burgess Shale deposit of Marble Canyon (Kootenay National Park, British Columbia). Surusicaris exhibits 12 simple, partly undivided biramous trunk limbs with long tripartite caeca, which may illustrate a plesiomorphic “fused” condition of exopod and endopod. We construe also that the head is made of five somites (= four segments), including two eyes, one pair of anomalocaridid-like frontalmost appendages, and three pairs of poorly sclerotized uniramous limbs. This fossil may therefore be a candidate for illustrating the origin of the plesiomorphic head condition in euarthropods, and questions the significance of the “two-segmented head” in, e.g., fuxianhuiids. The frontalmost appendage in isoxyids is intriguingly disparate, bearing similarities with both dinocaridids and euarthropods. In order to evaluate the relative importance of bivalved arthropods, such as Surusicaris, in the hypothetical structuro-functional transition between the dinocaridid frontal appendage and the pre-oral—arguably deutocerebral—appendage of euarthropods, we chose a phenetic approach and computed morphospace occupancy for the frontalmost appendages of 36 stem and crown taxa. Results show different levels of evolutionary decoupling between frontalmost appendage disparity and body plans. Variance is greatest in dinocaridids and “stem bivalved” arthropods, but these groups do not occupy the morphospace homogeneously. Rather, the diversity of frontalmost appendages in “stem bivalved” arthropods, distinct in its absence of clear clustering, is found to link the morphologies of “short great appendages,” chelicerae and antennules. This find fits the hypothesis of an increase in disparity of the deutocerebral appendage prior to its diversification in euarthropods, and possibly corresponds to its original time of development

Bathymetric and geographic population structure in the pan-Atlantic deep-sea bivalve Deminucula atacellana (Schenck, 1939).

Science.gov (United States)

Zardus, John D; Etter, Ron J; Chase, Michael R; Rex, Michael A; Boyle, Elizabeth E

2006-03-01

The deep-sea soft-sediment environment hosts a diverse and highly endemic fauna of uncertain origin. We know little about how this fauna evolved because geographic patterns of genetic variation, the essential information for inferring patterns of population differentiation and speciation are poorly understood. Using formalin-fixed specimens from archival collections, we quantify patterns of genetic variation in the protobranch bivalve Deminucula atacellana, a species widespread throughout the Atlantic Ocean at bathyal and abyssal depths. Samples were taken from 18 localities in the North American, West European and Argentine basins. A hypervariable region of mitochondrial 16S rDNA was amplified by polymerase chain reaction (PCR) and sequenced from 130 individuals revealing 21 haplotypes. Except for several important exceptions, haplotypes are unique to each basin. Overall gene diversity is high (h = 0.73) with pronounced population structure (Phi(ST) = 0.877) and highly significant geographic associations (P < 0.0001). Sequences cluster into four major clades corresponding to differences in geography and depth. Genetic divergence was much greater among populations at different depths within the same basin, than among those at similar depths but separated by thousands of kilometres. Isolation by distance probably explains much of the interbasin variation. Depth-related divergence may reflect historical patterns of colonization or strong environmental selective gradients. Broadly distributed deep-sea organisms can possess highly genetically divergent populations, despite the lack of any morphological divergence.

Interactive effects of CO₂ and trace metals on the proteasome activity and cellular stress response of marine bivalves Crassostrea virginica and Mercenaria mercenaria

Energy Technology Data Exchange (ETDEWEB)

Götze, Sandra [Alfred Wegener Institute, Helmholtz Centre for Polar, Marine Research, Functional Ecology, 27570 Bremerhaven (Germany); Department of Biology, University of North Carolina at Charlotte, Charlotte, NC 28223 (United States); Matoo, Omera B. [Department of Biology, University of North Carolina at Charlotte, Charlotte, NC 28223 (United States); Beniash, Elia [Department of Oral Biology, University of Pittsburgh, Pittsburgh, PA (United States); Saborowski, Reinhard [Alfred Wegener Institute, Helmholtz Centre for Polar, Marine Research, Functional Ecology, 27570 Bremerhaven (Germany); Sokolova, Inna M., E-mail: isokolov@uncc.edu [Department of Biology, University of North Carolina at Charlotte, Charlotte, NC 28223 (United States)

2014-04-01

Highlights: • Elevated P_CO₂ enhanced accumulation of Cu and Cd in the gills of mollusks. • The proteasome activities were affected by metals but robust to elevated P_CO₂. • Exposure to Cd and Cu had opposite effects on the proteasome activity. • Combined exposure to Cu and elevated P_CO₂ negatively affected energy status. - Abstract: Increased anthropogenic emission of CO₂ changes the carbonate chemistry and decreases the pH of the ocean. This can affect the speciation and the bioavailability of metals in polluted habitats such as estuaries. However, the effects of acidification on metal accumulation and stress response in estuarine organisms including bivalves are poorly understood. We studied the interactive effects of CO₂ and two common metal pollutants, copper (Cu) and cadmium (Cd), on metal accumulation, intracellular ATP/ubiquitin-dependent protein degradation, stress response and energy metabolism in two common estuarine bivalves—Crassostrea virginica (eastern oyster) and Mercenaria mercenaria (hard shell clam). Bivalves were exposed for 4–5 weeks to clean seawater (control) and to either 50 μg L⁻¹ Cu or 50 μg L⁻¹ Cd at one of three partial pressures of CO₂ P_CO₂ ~395, ~800 and ~1500 μatm) representative of the present-day conditions and projections of the Intergovernmental Panel for Climate Change (IPCC) for the years 2100 and 2250, respectively. Clams accumulated lower metal burdens than oysters, and elevated P_CO₂ enhanced the Cd and Cu accumulation in mantle tissues in both species. Higher Cd and Cu burdens were associated with elevated mRNA expression of metal binding proteins metallothionein and ferritin. In the absence of added metals, proteasome activities of clams and oysters were robust to elevated P_CO₂, but P_CO₂ modulated the proteasome response to metals. Cd exposure stimulated the chymotrypsin-like activity of the oyster proteasome

Innovations in Undergraduate Chemical Biology Education.

Science.gov (United States)

Van Dyke, Aaron R; Gatazka, Daniel H; Hanania, Mariah M

2018-01-19

Chemical biology derives intellectual vitality from its scientific interface: applying chemical strategies and perspectives to biological questions. There is a growing need for chemical biologists to synergistically integrate their research programs with their educational activities to become holistic teacher-scholars. This review examines how course-based undergraduate research experiences (CUREs) are an innovative method to achieve this integration. Because CUREs are course-based, the review first offers strategies for creating a student-centered learning environment, which can improve students' outcomes. Exemplars of CUREs in chemical biology are then presented and organized to illustrate the five defining characteristics of CUREs: significance, scientific practices, discovery, collaboration, and iteration. Finally, strategies to overcome common barriers in CUREs are considered as well as future innovations in chemical biology education.

Do biological and bedsite characteristics influence survival of neonatal white-tailed deer?

Directory of Open Access Journals (Sweden)

M Colter Chitwood

Full Text Available Coyotes recently expanded into the eastern U.S. and potentially have caused localized white-tailed deer population declines. Research has focused on quantifying coyote predation on neonates, but little research has addressed the potential influence of bedsite characteristics on survival. In 2011 and 2012, we radiocollared 65 neonates, monitored them intensively for 16 weeks, and assigned mortality causes. We used Program MARK to estimate survival to 16 weeks and included biological covariates (i.e., sex, sibling status [whether or not it had a sibling], birth weight, and Julian date of birth. Survival to 16 weeks was 0.141 (95% CI = 0.075-0.249 and the top model included only sibling status, which indicated survival was lower for neonates that had a sibling. Predation was the leading cause of mortality (35 of 55; 64% and coyotes were responsible for the majority of depredations (30 of 35; 86%. Additionally, we relocated neonates for the first 10 days of life and measured distance to firebreak, visual obstruction, and plant diversity at bedsites. Survival of predation to 10 days (0.726; 95% CI = 0.586-0.833 was weakly associated with plant diversity at bedsites but not related to visual obstruction. Our results indicate that neonate survival was low and coyote predation was an important source of mortality, which corroborates several recent studies from the region. Additionally, we detected only weak support for bedsite cover as a covariate to neonate survival, which indicates that mitigating effects of coyote predation on neonates may be more complicated than simply managing for increased hiding cover.

Scaffolded biology.

Science.gov (United States)

Minelli, Alessandro

2016-09-01

Descriptions and interpretations of the natural world are dominated by dichotomies such as organism vs. environment, nature vs. nurture, genetic vs. epigenetic, but in the last couple of decades strong dissatisfaction with those partitions has been repeatedly voiced and a number of alternative perspectives have been suggested, from perspectives such as Dawkins' extended phenotype, Turner's extended organism, Oyama's Developmental Systems Theory and Odling-Smee's niche construction theory. Last in time is the description of biological phenomena in terms of hybrids between an organism (scaffolded system) and a living or non-living scaffold, forming unit systems to study processes such as reproduction and development. As scaffold, eventually, we can define any resource used by the biological system, especially in development and reproduction, without incorporating it as happens in the case of resources fueling metabolism. Addressing biological systems as functionally scaffolded systems may help pointing to functional relationships that can impart temporal marking to the developmental process and thus explain its irreversibility; revisiting the boundary between development and metabolism and also regeneration phenomena, by suggesting a conceptual framework within which to investigate phenomena of regular hypermorphic regeneration such as characteristic of deer antlers; fixing a periodization of development in terms of the times at which a scaffolding relationship begins or is terminated; and promoting plant galls to legitimate study objects of developmental biology.

Risk management of biologicals: a regulatory and clinical perspective

NARCIS (Netherlands)

Giezen, T.J.|info:eu-repo/dai/nl/304823112

2011-01-01

Biologicals are a relatively new class of drugs and are important treatment options for a variety of chronic and/or serious conditions. Biologicals have different characteristics as compared to the traditional chemically synthesised drugs, which may result in different risk profiles and the need for

Toward scalable parts families for predictable design of biological circuits.

Science.gov (United States)

Lucks, Julius B; Qi, Lei; Whitaker, Weston R; Arkin, Adam P

2008-12-01

Our current ability to engineer biological circuits is hindered by design cycles that are costly in terms of time and money, with constructs failing to operate as desired, or evolving away from the desired function once deployed. Synthetic biologists seek to understand biological design principles and use them to create technologies that increase the efficiency of the genetic engineering design cycle. Central to the approach is the creation of biological parts--encapsulated functions that can be composited together to create new pathways with predictable behaviors. We define five desirable characteristics of biological parts--independence, reliability, tunability, orthogonality and composability, and review studies of small natural and synthetic biological circuits that provide insights into each of these characteristics. We propose that the creation of appropriate sets of families of parts with these properties is a prerequisite for efficient, predictable engineering of new function in cells and will enable a large increase in the sophistication of genetic engineering applications.

BIOLOGICAL CHARACTERISTICS OF PIKE (ESOX LUCIUS LINNAEUS, 1758 OF THE LOWER DNIEPER RIVER IN CURRENT CONDITIONS

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K. Geina

2015-03-01

Full Text Available Purpose. To analyze major biological characteristics of pike (Esox lucius L., 1758 stock in the lower Dnieper River in the conditions of transformed flow. Methodology. Collection of the ichthyological material was carried out in the lower Dnieper River from commercial fishing gears, including beach seines, drag seines, fyke-nets. Field, laboratory processing of samples and mathematical analysis of the obtained results were carried out according to generally accepted methods and guidelines with some assumptions regarding the duration of pike fattening directly in the lower Dnieper River. Findings. Recent years, there is an increase in the specific weight of younger age groups in the pike stock in the lower Dnieper River. Analysis of linear growth indicates on satisfactory environmental conditions for pike. Current commercial contingent of pike is based on size classes of 46–50 cm versus 22–32 cm in the first half of the last century. Reproductive properties of pike, in particular fecundity, egg size and maturity coefficients did not virtually change compared to those of the last century. Depending on linear sizes, the absolute fecundity is 32.3–155.8 thousand eggs and the maturation coefficient is 11.1–15.7%. Morphologic variability of pike in the lower Dnieper River during the period from 1980s to the present time was observed for plastic features, which characterized fin sizes. Sexual dimorphism in current conditions was observed only for maximum body depth. No significant differences for other plastic features between males and females of pike in the lower Dnieper River. Originality. The data on biological characteristics of pike stock from the lower Dnieper River have been updated. Current fecundity of females of different size groups recorded in commercial catches was been determined. An analysis of morphological variability of major plastic features of pike in the process of the transformation of the Dnieper River flow has been

Burrowing behavior of a deposit feeding bivalve predicts change in intertidal ecosystem state

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Tanya Joan Compton

2016-03-01

Full Text Available Behavior has a predictive power that is often underutilized as a tool for signaling ecological change. The burrowing behavior of the deposit feeding bivalve Macoma balthica reflects a typical food-safety trade-off. The choice to live close to the sediment surface comes at a risk of predation and is a decision made when predation danger, food intake rates or future fitness prospects are low. In parts of the Dutch Wadden Sea, Macoma populations declined by 90% in the late 1990s, in parallel with large-scale mechanical cockle-dredging activities. During this decline, the burrowing depth of Macoma became shallow and was correlated with the population decline in the following year, indicating that it forecasted population change. Recently, there has been a series of large recruitment events in Macoma. According to the food-safety trade-off, we expected that Macoma should now live deeper, and have a higher body condition in association with this change in depth of living. Indeed, we observed that Macoma now lives deeper and that living depth in a given year forecasted population growth to the next year, especially in individuals larger than 14 mm. As living depth and body condition were strongly correlated in individuals larger than 14 mm, larger Macoma could be living deeper to protect their reproductive assets. Our results confirmed that burrowing depth signals impending population change and, together with body condition, can provide an early warning signal of ecological change. We suggest that population recovery is being driven by improved intertidal habitat quality in the Dutch Wadden Sea, rather than by the proposed climate-change related effects. This shift in ecosystem state is suggested to include the recovery of diatom habitat in the top layer of the sediment after cockle-dredging ended.

Larval abundance and its relation to macrofouling settlement pattern in the coastal waters of Kalpakkam, southeastern part of India.

Science.gov (United States)

Sahu, Gouri; Satpathy, K K; Mohanty, A K; Biswas, Sudeepta; Achary, M Smita; Sarkar, S K

2013-02-01

The present work revealed that salinity, water temperature, and food availability were the most crucial factors affecting the abundance of larvae and their settlement as macrofouling community in the coastal waters of Kalpakkam. Quantitative as well as qualitative results showed that late post-monsoon (April-May) and pre-monsoon (June-September) periods were found to be suitable periods for larval growth, development, and survival to adult stages for most of the organisms. Clustering of physico-chemical and biological (including larval and adult availability) data yielded two major clusters; one formed by northeast (NE) monsoon months (October-January) and the other by post-monsoon/summer (February-May) months, whereas; pre-monsoon months (June-September) were distributed between these two clusters. Among all the major macrofouler groups, only bivalves established a successful relationship between its larval abundance and adult settlement. Principal component analysis indicated good associations of bivalve larvae with polychaete larvae and adult bivalves with adult barnacles. However, biotic relation between ascidians and bryozoans was observed both in the larval as well as adult community.

Side-by-Side Comparison of the Biological Characteristics of Human Umbilical Cord and Adipose Tissue-Derived Mesenchymal Stem Cells

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Li Hu

2013-01-01

Full Text Available Both human adipose tissue-derived mesenchymal stem cells (ASCs and umbilical cord-derived mesenchymal stem cells (UC-MSCs have been explored as attractive mesenchymal stem cells (MSCs sources, but very few parallel comparative studies of these two cell types have been made. We designed a side-by-side comparative study by isolating MSCs from the adipose tissue and umbilical cords from mothers delivering full-term babies and thus compared the various biological aspects of ASCs and UC-MSCs derived from the same individual, in one study. Both types of cells expressed cell surface markers characteristic of MSCs. ASCs and UC-MSCs both could be efficiently induced into adipocytes, osteoblasts, and neuronal phenotypes. While there were no significant differences in their osteogenic differentiation, the adipogenesis of ASCs was more prominent and efficient than UC-MSCs. In the meanwhile, ASCs responded better to neuronal induction methods, exhibiting the higher differentiation rate in a relatively shorter time. In addition, UC-MSCs exhibited a more prominent secretion profile of cytokines than ASCs. These results indicate that although ASCs and UC-MSCs share considerable similarities in their immunological phenotype and pluripotentiality, certain biological differences do exist, which might have different implications for future cell-based therapy.

Biological characteristics of Trichospilus diatraeae (Hymenopetra: Eulophidae in the hosts Bombyx mori (Lepidoptera: Bombycidae and Diatraea saccharalis (Lepidoptera: Crambidae

Directory of Open Access Journals (Sweden)

Vanessa Rodrigues Ferreira Calado

2014-03-01

Full Text Available Trichospilus diatraeae Cherian & Margabandhu, 1942 (Hymenoptera: Eulophidae is a pupal endoparasitoid of lepidoptera and it has been studied as a potential agent for biological control of pests. For developing techniques to breed parasitoids, there is a need to choose the appropriate alternative host, thus, this article aims to evaluate the biological characteristics of T. diatraeae with regard to the hosts Bombyx mori Linneaus (Lepidoptera: Bombycidae and Diatraea saccharalis (Fabricius (Lepidoptera: Crambidae, in laboratory. Twelve pupae of B. mori and twelve pupae of D. saccharalis, within 72 and 24 h of life, respectively, were exposed to parasitism by 21 female parasitoids at 25 ± 1°C, with relative humidity 70 ± 10% and photophase of 14 h. Life-cycle duration (egg – adult of T. diatraeae was 19.44 ± 0.12 days in pupae of D. saccharalis and 18.00 ± 0.05 days in pupae of B. mori, the emergence of parasitoid progeny was 66.60% in pupae of D. saccharalis, and 75.00% in pupae of B. mori. The progeny of T. diatraeae was 354.50 ± 43.21 per pupa of D. saccharalis and 469.11 ± 15.19 per pupa of B. mori. Trichospilus diatraeae showed suitability to the host and its ability to parasitize various hosts.

Uranium(VI) speciation: modelling, uncertainty and relevance to bioavailability models. Application to uranium uptake by the gills of a freshwater bivalve

International Nuclear Information System (INIS)

Denison, F.H.

2004-07-01

The effects of varying solution composition on the interactions between uranium(VI) and excised gills of the freshwater bivalve Corbicula fluminea have been investigated in well defined solution media. A significant reduction in the uptake of uranium was observed on increasing the concentrations of the uranium complexing ligands citrate and carbonate. Saturation kinetics as a function of uranium concentration at a pH value of 5.0 were observed, indicating that the uptake of uranium is a facilitated process, probably involving one or several trans-membrane transport systems. A relatively small change in the uptake of uranium was found as a function of pH (factor of ca. 2), despite the extremely large changes to the solution speciation of uranium within the range of pH investigated (5.0 - 7.5). A comprehensive review of the thermodynamic data relevant to the solution composition domain employed for this study was performed. Estimates of the uncertainties for the formation constants of aqueous uranium(VI) species were integrated into a thermodynamic database. A computer program was written to predict the equilibrium distribution of uranium(VI) in simple aqueous systems, using thermodynamic parameter mean-values. The program was extended to perform Monte Carlo and Quasi Monte Carlo uncertainty analyses, incorporating the thermodynamic database uncertainty estimates, to quantitatively predict the uncertainties inherent in predicting the solution speciation of uranium. The use of thermodynamic equilibrium modelling as a tool for interpreting the bioavailability of uranium(VI) was investigated. Observed uranium(VI) uptake behaviour was interpreted as a function of the predicted changes to the solution speciation of uranium. Different steady-state or pre-equilibrium approaches to modelling uranium uptake were tested. Alternative modelling approaches were also tested, considering the potential changes to membrane transport system activity or sorption characteristics on

Wastewater Characteristics, Treatment and Disposal

OpenAIRE

Von Sperling, Marcos

2007-01-01

"Wastewater Characteristics, Treatment and Disposal is the first volume in the series Biological Wastewater Treatment, presenting an integrated view of water quality and wastewater treatment. The book covers the following topics: wastewater characteristics (flow and major constituents) impact of wastewater discharges to rivers and lakes overview of wastewater treatment systems complementary items in planning studies. This book, with its clear and practical approach, lays the foundations f...

Tracking Biological and Ecosystem Responses to Changing Environmental Conditions in the Pacific Arctic

Science.gov (United States)

Grebmeier, J. M.; Cooper, L. W.; Frey, K. E.; Moore, S. E.

2014-12-01

Changing seasonal sea ice conditions and seawater temperatures strongly influence biological processes and marine ecosystems at high latitudes. In the Pacific Arctic, persistent regions termed "hotspots", are localized areas with high benthic macroinfaunal biomass that have been documented over four decades (see Figure). These regions are now being more formally tracked to relate physical forcing and ecosystem response as an Arctic Distributed Biological Observatory (DBO) supported by the US National Ocean Policy Implementation Plan and international partners. These hotspots are important foraging areas for upper trophic level benthic feeders, such as marine mammals and seabirds. South of St. Lawrence Island (SLI) in the northern Bering Sea, benthic feeding spectacled eiders, bearded seals and walruses are important winter consumers of infauna, such as bivalves and polychaetes. Gray whales have historically been a major summer consumer of benthic amphipods in the Chirikov Basin to the north of SLI, although summertime sightings of gray whales declined in the Chirikov from the 1980s up until at least 2002. The SE Chukchi Sea hotspot, as are the other hotspots, is maintained by export of high chlorophyll a that is produced locally as well as advected by water masses transiting northward through the system. Both walrus and gray whales are known to forage in this hotspot seasonally on high biomass levels of benthic prey. Notably the center of the highest benthic biomass regions has shifted northward in three of the DBO hotspots in recent years. This has coincided with changing sediment grain size, an indicator of current speed, and is also likely a response to changes in primary production in the region. Studies of these broad biological responses to changing physical drivers have been facilitated through development of the DBO cooperative effort by both US and international scientists. The DBO includes a series of coordinated, multi-trophic level observations that

Interactive effects of CO2 and trace metals on the proteasome activity and cellular stress response of marine bivalves Crassostrea virginica and Mercenaria mercenaria

International Nuclear Information System (INIS)

Götze, Sandra; Matoo, Omera B.; Beniash, Elia; Saborowski, Reinhard; Sokolova, Inna M.

2014-01-01

Highlights: • Elevated P CO 2 enhanced accumulation of Cu and Cd in the gills of mollusks. • The proteasome activities were affected by metals but robust to elevated P CO 2 . • Exposure to Cd and Cu had opposite effects on the proteasome activity. • Combined exposure to Cu and elevated P CO 2 negatively affected energy status. - Abstract: Increased anthropogenic emission of CO 2 changes the carbonate chemistry and decreases the pH of the ocean. This can affect the speciation and the bioavailability of metals in polluted habitats such as estuaries. However, the effects of acidification on metal accumulation and stress response in estuarine organisms including bivalves are poorly understood. We studied the interactive effects of CO 2 and two common metal pollutants, copper (Cu) and cadmium (Cd), on metal accumulation, intracellular ATP/ubiquitin-dependent protein degradation, stress response and energy metabolism in two common estuarine bivalves—Crassostrea virginica (eastern oyster) and Mercenaria mercenaria (hard shell clam). Bivalves were exposed for 4–5 weeks to clean seawater (control) and to either 50 μg L −1 Cu or 50 μg L −1 Cd at one of three partial pressures of CO 2 (P CO 2 ∼395, ∼800 and ∼1500 μatm) representative of the present-day conditions and projections of the Intergovernmental Panel for Climate Change (IPCC) for the years 2100 and 2250, respectively. Clams accumulated lower metal burdens than oysters, and elevated P CO 2 enhanced the Cd and Cu accumulation in mantle tissues in both species. Higher Cd and Cu burdens were associated with elevated mRNA expression of metal binding proteins metallothionein and ferritin. In the absence of added metals, proteasome activities of clams and oysters were robust to elevated P CO 2 , but P CO 2 modulated the proteasome response to metals. Cd exposure stimulated the chymotrypsin-like activity of the oyster proteasome at all CO 2 levels. In contrast, trypsin- and caspase-like activities of

Analysis of biological characteristics of corneal endothelium in old patients with high myopia

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Ya-Qiong Chen

2014-11-01

Full Text Available AIM: To analyze quantitatively the biological characteristics of corneal endothelium in old patients of high myopia with non-contact automatic corneal endothelial microscope.METHODS:A total of 189 old patients(197 eyeswere divided into the high myopia group and the normal control group according to refractive diopter, in which the former 98 cases(103 eyes, the latter 91 cases(94 eyes. The hexagonal cell(6A, the coefficient of variation(CV, the average cell area(AVE, the average cell density(CDand the central corneal thickness(CCTwere measured by non-contact automatic corneal endothelium. SPSS 14.0 software was used to analyze their percentage. Z-test was used to compare the mean and Chi-square test was used to compare the rate in between. RESULTS: The average cell density in high myopia patients decreased, but there were 14 eyes >3 000/mm2, 11 eyes 2 and 78 eyes in the 2 000～3 000/mm2, there were each 0 eye, 3 eyes and 91 eyes respectively in the normal control group. There was statistically significant difference between high myopia group and control(χ2=19.11, PPP>0.05. CONCLUSION: There will provide a reference valuable for clinical surgeon. Because according to the changes of parameters and morphology of the corneal endothelial cells, we can understand the repair ability, to predict the consequence of the treatment, in order to determine the design and the choice of a surgical.

High voltage electric field effects on structure and biological characteristics of barley seeds

Energy Technology Data Exchange (ETDEWEB)

Khazaei, J. [Tehran Univ., Tehran (Iran, Islamic Republic of). Dept. of Agrotechnology, Univ. College of Abouraihan; Aliabadi, E. [Tehran Univ., Tehran (Iran, Islamic Republic of). Dept. of Crop Production Horticulture, Univ. College of Aburaihan; Shayegani, A.A. [Tehran Univ., Tehran (Iran, Islamic Republic of). Univ. College of Engineering

2010-07-01

Electric biostimulation of seeds is a pre-sowing treatment in which an electric field is applied to seeds to increase germination of non standard seeds. This paper reported on a study that examined the effects of AC electric field and exposure time on the structure and biological characteristics of barley seeds. The objective was to determine the potential to accelerate seed germination, plant growth and root development by the electric field strength and exposure time. Makooei cultivar barley seeds were used in this study. The effect of electric field strength (at 2, 4, 9, and 14 kV/m) and exposure time (at 15, 45, 80, and 150 min) on seed germination was studied along with height of seedling, length or root, height of stem, length of leaves, earliness, dry weight and wet weight of seedling. The treated seeds were stored for a month in a refrigerator at 5 degrees C prior to the germination experiments. The initial germination percent of the seed was 81 per cent. The treatment of barley seeds in an AC electric field had a positive effect on all investigated parameters. The germination percent of the treated seed increased to 94.5 per cent . The seeds exposed for long periods of time (45 to 150 min) showed better germination than the seeds exposed to lower exposure times. Dry and wet weights of seedling increased 143.4 per cent and 45.7 per cent, respectively.

Translating tumor biology into personalized treatment planning: analytical performance characteristics of the Oncotype DX Colon Cancer Assay.

Science.gov (United States)

Clark-Langone, Kim M; Sangli, Chithra; Krishnakumar, Jayadevi; Watson, Drew

2010-12-23

The Oncotype DX Colon Cancer Assay is a new diagnostic test for determining the likelihood of recurrence in stage II colon cancer patients after surgical resection using fixed paraffin embedded (FPE) primary colon tumor tissue. Like the Oncotype DX Breast Cancer Assay, this is a high complexity, multi-analyte, reverse transcription (RT) polymerase chain reaction (PCR) assay that measures the expression levels of specific cancer-related genes. By capturing the biology underlying each patient's tumor, the Oncotype DX Colon Cancer Assay provides a Recurrence Score (RS) that reflects an individualized risk of disease recurrence. Here we describe its analytical performance using pre-determined performance criteria, which is a critical component of molecular diagnostic test validation. All analytical measurements met pre-specified performance criteria. PCR amplification efficiency for all 12 assays was high, ranging from 96% to 107%, while linearity was demonstrated over an 11 log2 concentration range for all assays. Based on estimated components of variance for FPE RNA pools, analytical reproducibility and precision demonstrated low SDs for individual genes (0.16 to 0.32 CTs), gene groups (≤ 0.05 normalized/aggregate CTs) and RS (≤ 1.38 RS units). Analytical performance characteristics shown here for both individual genes and gene groups in the Oncotype DX Colon Cancer Assay demonstrate consistent translation of specific biology of individual tumors into clinically useful diagnostic information. The results of these studies illustrate how the analytical capability of the Oncotype DX Colon Cancer Assay has enabled clinical validation of a test to determine individualized recurrence risk after colon cancer surgery.

Preparation and biological characteristics of 99mTc-diol a renal agent

International Nuclear Information System (INIS)

Castanheira, I.; Paulo, A.; Neves, M.; Patricio, L.; Sawas-Dimopoulou, C.

1993-01-01

The present work concerns the production of 1,2-dihydroxypropyl-1-phosphonic acid (diol) by acid hydrolysis of (-cis) 1,2-epoxypropylphosphonic acid (phosphomycin), and its formation as a kit easily labeled with [ 99m Tc]pertechnetate. Biodistribution studies and whole-body autoradiographies in mice show that 99m Tc-diol has a specific affinity for the kidneys: it is rapidly cleared from the blood and excreted in urine. Part of the injected activity remains in the kidney cortex sufficiently long to permit kidney imaging. In comparison with other agents which also localize in the kidney cortex, such as 99m Tc-DMSA and 99m Tc-glucoheptonate ( 99m Tc-GHA), the main differences are the following: the peak of renal activity is reached early in the 5 min post-injection period for 99m Tc-diol, only at about 10 min post-injection for 99m Tc-GHA and after 3 h post-injection for 99m Tc-DMSA. The uptake of 99m Tc-diol by other organs, especially by bones, is much smaller than in the case of 99m Tc-DMSA. Unlike 99m Tc-DMSA, the biodistribution of 99m Tc-diol is not significantly influenced by acid-base imbalance. Moreover, the retention effect of hyperuricemia on 99m Tc-diol blood clearance and kidney excretion could be the result of a competition mechanism between this radiopharmaceutical and uric acid for a common transport system. The above biological characteristics suggest that 99m Tc-diol is a kidney radiopharmaceutical with an ability for functional and imaging studies. (author)

[The influence of procaine electrophoresis and mesotherapy on the characteristics of biological age].

Science.gov (United States)

Turova, E A; Konchugova, T V; Balaban, E I; Fadeeva, N I; Golovach, A V; Teniaeva, E A

2012-01-01

The assessment of the biological age is needed to estimate the level of health and the efficacy of measures being undertaken to slow down the ageing processes and prolong the active life of the patients. Earlier studies have demonstrated the improvement of both physical health and psychic status of the elderly patients following intravenous administration of procaine. The objective of the present work was to evaluate effect of various methods of administration of a 2% procaine solution on the biological age. A total of 95 subjects at the age between 30 and 75 years were enrolled in the study. The procaine solutions were applied to the collar region. The patients of group 1 were treated with 2% procaine electrophoresis, those in group 2 with procaine galvanization with the same parameters. Mesotherapy using the 2% procaine solution was given to the patients of group 3. It was substituted by placebo (0.9% physiological solution) in the patients of group 4 (controls). The study revealed the most significant decrease of the biological age (calculated as described by L. M. Belozerova) in the patients treated with procaine electrophoresis (91% improvement). The mesotherapeutic administration of procaine also produced the beneficial effect (59% improvement). Neither procaine galvanization nor placebo mesotherapy caused any significant change of the variables characterizing the biological age.

Feeding behavior of the invasive bivalve Limnoperna fortunei (Dunker, 1857 under exposure to toxic cyanobacteria Microcystis aeruginosa

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V Gazulha

Full Text Available The aim of this study was to test the effects of cyanobacteria toxicity on feeding behavior of the golden mussel Limnoperna fortunei. First, it was tested the hypothesis that L. fortunei preferentially graze on non-toxic phytoplankton and reject toxic cyanobacteria. Second, it was tested the hypothesis that toxic cyanobacteria negatively affect feeding and survival of L. fortunei. The present study is the first to evaluate the effects of toxic cyanobacteria on L. fortunei feeding and survival. In the short-term grazing, golden mussel filtration rates were evaluated in the presence of toxic and non-toxic strains of cyanobacteria Microcystis aeruginosa, and non-toxic phytoplankton Nitzschia palea. Highest filtration rates were registered when mussels fed on Nitzschia. Despite that, golden mussel expelled Nitzschia cells in large quantities and preferentially ingested Microcystis cells, both toxic and non-toxic strains. In the long-term grazing, mussels were exposed to toxic and non-toxic strains of Microcystis during 5 days. Filtration rates were not significantly different for toxic and non-toxic Microcystis throughout exposure period. The results have demonstrated cyanobacteria toxicity is not the main factor influencing L. fortunei feeding behavior. Survival of L. fortunei feeding on toxic cyanobacteria shows the potential of this invasive bivalve as a vector to the transference of cyanotoxins to higher trophic levels.

Physiological status and intersex in the endobenthic bivalve Scrobicularia plana from thirteen estuaries in northwest France

International Nuclear Information System (INIS)

Fossi Tankoua, O.; Amiard-Triquet, C.; Denis, F.; Minier, C.; Mouneyrac, C.; Berthet, B.

2012-01-01

The bivalve Scrobicularia plana, an important species for the structure and functioning of estuarine and coastal mudflats, was studied in thirteen sites from NW France differing by their degree of contamination to document the presence of reproduction impairments (intersex, sex ratio, gonadosomatic indices) in relation to the condition revealed by using hepatosomatic and condition indices. In agreement with recent studies in other European estuaries, intersex was revealed in all the studied estuaries, including sites the chemical and ecological status of which is considered “good” according to the criteria of the European Water Framework Directive. The presence of endocrine disrupting chemicals (EDCs) could result in such disturbances. Our results re-inforce the concern linked to the subtle effects of EDCs, which are active at very low doses, often in the absence of any major sign of toxicity. However at this stage, no clear link may be established between intersex and population effects. - Highlights: ► Clams were collected from 13 estuaries differing by their degree of contamination. ► Gonadosomatic, hepatosomatic and condition indices were determined. ► Reproduction impairments (intersex, biased sex ratio, asynchronism) were shown. ► Intersex shown even at sites with good ecological status (Water Framework Directive). ► No clear links between intersex and populational effects. - Intersex in clams from estuaries, the chemical/ecological status of which was considered as good under the EC Water Framework Directive.

Identifying tsunami deposits using shell taphonomy: Sur lagoon, Oman

Science.gov (United States)

Donato, S.; Reinhardt, E.; Rothaus, R.; Boyce, J.

2007-05-01

environmental factors acting upon the shell assemblages. These results suggest that tsunamigenic shell deposits can be identified based on their taphonomic characteristics when compared to beach and storm deposits in the same setting. Our data indicates that the following diagnostic taphonomic characteristics may indicate a tsunamigenic deposit: 1) presence/absence of articulated bivalves, 2) increased percentage of fragmented valves, 3) increased percentage of angular fragments, and 4) the large number of offshore bivalves in the lagoon. This study highlights the potential benefits and opportunity for using bivalve taphonomy as a useful indicator of paleotsunami deposits, particularly in protected coastal embayments in arid regions where stratified deposits might not readily preserve. This technique holds potential, as shell deposits are easy to identify in the field by non-experts, is very low cost, and analysis uses simple, easily applicable and recognizable taphonomic characteristics. Furthermore, this proxy can be used for risk assessment purposes in coastal areas with a seismic history but lacking a paleotsunami record. Further testing of this hypothesis should be conducted along the Omani coastline, particularly in the lagoons along the Eastern promontory. Key Words: tsunami, taphonomy, Oman, bivalve

[Confirming Indicators of Qualitative Results by Chromatography-mass Spectrometry in Biological Samples].

Science.gov (United States)

Liu, S D; Zhang, D M; Zhang, W; Zhang, W F

2017-04-01

Because of the exist of complex matrix, the confirming indicators of qualitative results for toxic substances in biological samples by chromatography-mass spectrometry are different from that in non-biological samples. Even in biological samples, the confirming indicators are different in various application areas. This paper reviews the similarities and differences of confirming indicators for the analyte in biological samples by chromatography-mass spectrometry in the field of forensic toxicological analysis and other application areas. These confirming indicators include retention time （RT）, relative retention time （RRT）, signal to noise （S/N）, characteristic ions, relative abundance of characteristic ions, parent ion-daughter ion pair and abundance ratio of ion pair, etc. Copyright© by the Editorial Department of Journal of Forensic Medicine.

Comparison of influences of sediments and sea water on accumulation of radionuclides by marine organisms

International Nuclear Information System (INIS)

Ueda, Taiji; Nakamura, Ryoichi; Suzuki, Yuzuru

1978-01-01

The concentration factors of 106 Ru- 106 Rh and 137 Cs for a marine bivalve and a alga were investigated. Furthermore, the transfer ratio ([cpm/g of organism]/[cpm/g of sediment]) of these nuclides from contaminated sediments to organisms was examined. Then the concentration factors were compared with the transfer ratio to know the relative influence of sea water and sediments on the contamination of marine organisms. The obtained figures, we call the biological factor of the sediments (BFS), were 70 and 160 for red alga and bivalve on 137 Cs, and 5400 and 2900 for them in case of 106 Ru- 106 Rh, respectively. These figures were comparable to those for annelid worm, 40 on 137 Cs and 1000 on 106 Ru- 106 Rh. (auth.)

Shifting baselines in Antarctic ecosystems; ecophysiological response to warming in Lissarca miliaris at Signy Island, Antarctica.

Science.gov (United States)

Reed, Adam J; Thatje, Sven; Linse, Katrin

2012-01-01

The Antarctic Peninsula has experienced a rapid increase in atmospheric temperature over the last 50 years. Whether or not marine organisms thriving in this cold stenothermal environment are able to cope with warming is of concern. Here, we present changes to the growth and shell characteristics of the ecologically important, small and short lived brooding bivalve Lissarca miliaris from Signy Island, Antarctica. Using material collected from the 1970's to the present day, we show an increase in growth rate and adult shell deterioration accompanied by a decrease in offspring size, associated with an increase in annual average temperatures. Critical changes to the bivalve's ecology seen today evidence the problem of a shift in baseline since the onset of warming recorded in Antarctica. These small bivalves are demonstrating ecophysiological responses to subtle warming that, provided warming continues, could soon surpass a physiological tipping point, adding to warming associated threats such as increased predatory pressure and ocean acidification.

Shifting baselines in Antarctic ecosystems; ecophysiological response to warming in Lissarca miliaris at Signy Island, Antarctica.

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Adam J Reed

Full Text Available The Antarctic Peninsula has experienced a rapid increase in atmospheric temperature over the last 50 years. Whether or not marine organisms thriving in this cold stenothermal environment are able to cope with warming is of concern. Here, we present changes to the growth and shell characteristics of the ecologically important, small and short lived brooding bivalve Lissarca miliaris from Signy Island, Antarctica. Using material collected from the 1970's to the present day, we show an increase in growth rate and adult shell deterioration accompanied by a decrease in offspring size, associated with an increase in annual average temperatures. Critical changes to the bivalve's ecology seen today evidence the problem of a shift in baseline since the onset of warming recorded in Antarctica. These small bivalves are demonstrating ecophysiological responses to subtle warming that, provided warming continues, could soon surpass a physiological tipping point, adding to warming associated threats such as increased predatory pressure and ocean acidification.

Using Animals to Teach Children Biology: Exploring the Use of Biological Explanations in Children's Anthropomorphic Storybooks

Science.gov (United States)

Geerdts, Megan; Van De Walle, Gretchen; LoBue, Vanessa

2016-01-01

Research Findings: Anthropomorphism--the attribution of human characteristics to nonhuman entities--has long been a staple of children's media. However, children's experiences with anthropomorphic media may interfere with biological reasoning instead encouraging an anthropocentric view of the natural world. To date, little research has addressed…

Biological effect of radionuclides on plants

International Nuclear Information System (INIS)

Prister, B.S.; Khal'chenko, V.A.; Polyakova, V.Y.; Shevchenko, V.A.; Shejn, G.P.; Aleksakhin, R.M.

1979-01-01

Stated are dosimetry principles and given is an analysis of biological radionuclide effect on plants in aerial and root intakes. A comparative barley radiosensitivity characteristic depending on plant development phases during irradiation is given using LD 50 criteria. Considered is a possibility for using generalized bioinformation parameters as sensitive indications for estimating biological effects due to the influence of low radiation doses. On the grounds of data obtained generalization are forecasted probable losses of crops when getting radionuclides into plants during various vegetation periods

Biological Characteristics and Medical Treatment of Breast Cancer in Young Women—A Featured Population: Results from the NORA Study

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P. Pronzato

2011-01-01

Full Text Available Background. The present paper described the biological characteristics and clinical behavior of young women in the cohort NORA study Patients and Methods. From 2000–2002, patients (>3500 were enrolled at 77 Italian hospitals. Women aged ≤50 years (=1013 were stratified into age groups (≤35, 36–40, 41–45, and 46–50 years. The relationship between age and patient characteristics, cancer presentation, and treatment was analyzed. Results. Younger women more frequently had tumors with ER/PgR-negative(2=7.07; =.008, HER2 amplification (2=5.76; =.01, and high (≥10% Ki67 labelling index (2=9.53; =.002. Positive nodal status, large tumors, and elevated Ki67 all associated with the choice for chemotherapy followed by endocrine therapy in hormone receptor-positive patients (40 versus ≤40, <.0001, resp.. At multivariate analysis, after adjustment for significant clinical and pathological factors, age remains a significant prognostic variable (HR=0.93, =.0021. Conclusion. This cohort study suggests that age per sè is an important prognostic factor. The restricted role of early diagnosis and the aggressive behavior of cancer in this population make necessary the application of targeted medical strategies crucial.

Biological Characteristics and Medical Treatment of Breast Cancer in Young Women-A Featured Population: Results from the Nora Study

International Nuclear Information System (INIS)

Pronzato, P.; Mustacchi, G.; De Matteis, A.; Di Costanzo, F.; Rulli, E.; Floriani, I; Cazzaniga, M.E.

2011-01-01

Background. The present paper described the biological characteristics and clinical behavior of young women in the cohort NORA study Patients and Methods. From 2000-2002, patients (N>3500) were enrolled at 77 Italian hospitals. Women aged =50 years (N=1013) were stratified into age groups (=35, 36-40, 41-45, and 46-50 years). The relationship between age and patient characteristics, cancer presentation, and treatment was analyzed. Results. Younger women more frequently had tumors with ER/PgR-negative(x 2 =7.07; P=.008), HER2 amplification (x 2 =5.76; P=.01), and high (≤10%) Ki67 labelling index (x 2 =9.53; P=.002). Positive nodal status, large tumors, and elevated Ki67 all associated with the choice for chemotherapy followed by endocrine therapy in hormone receptor-positive patients (P 40 versus =40, P<.0001, resp.). At multivariate analysis, after adjustment for significant clinical and pathological factors, age remains a significant prognostic variable (HR=0.93, P=.0021). Conclusion. This cohort study suggests that age per se is an important prognostic factor. The restricted role of early diagnosis and the aggressive behavior of cancer in this population make necessary the application of targeted medical strategies crucial. human epidermal growth factor receptor

The Effects of Sex and Gender-Role Characteristics on Facets of Sociosexuality in Heterosexual Young Adults.

Science.gov (United States)

Rammsayer, Thomas H; Borter, Natalie; Troche, Stefan J

2017-02-01

The present study was designed to systematically investigate the functional relationships among biological sex; masculine and feminine gender-role characteristics; and sociosexual behavior, attitude toward, and desire for uncommitted casual sex as three facets of sociosexual orientation. For this purpose, facets of sociosexuality were assessed by the Revised Sociosexual Orientation Inventory (SOI-R) and masculine and feminine gender-role characteristics were assessed by a revised German version of the Bem Sex-Role Inventory in 499 male and 958 female heterosexual young adults. Confirmatory factor analysis (CFA) and structural equation modeling (SEM) revealed differential mediating effects of masculine and feminine gender-role characteristics on the relationship between biological sex and the three facets of sociosexual orientation. Sociosexual behavior was shown to be primarily controlled by an individual's level of masculine gender-role characteristics irrespective of biological sex. Sociosexual desire was identified as being a sole function of biological sex with no indication for any effect of masculine or feminine gender-role characteristics, while sociosexual attitude was influenced by biological sex as well as by masculine and feminine gender-role characteristics to about the same extent.

Histopathologic and biochemical responses in Arctic marine bivalve molluscs exposed to experimentally spilled oil

Energy Technology Data Exchange (ETDEWEB)

Neff, J.M.; Hillman, R.E.; Carr, R.S.; Buhl, R.L.; Lahey, J.I.

1987-01-01

Following two experimental spills of chemically dispersed and undispersed crude oil in shallow bays on the northwest coast of Baffin Island bivalve molluscs accumulated significant amounts of petroleum hydrocarbons in bay receiving dispersed oil and in those receiving crude oil alone. Specimens of Mya truncata and Macoma calcarea for histopathologic examination were collected immediately before, immediately after and one year after the experimental oil spills. Immediately after there was increased gill and digestive tract necrosis in Mya from the chemically dispersed oil. After one year a few clams had granulocytomas throughout the tissues. Three clams receiving oil alone collected one year after the spill had invasive neoplasias. There were few lesions in Macoma immediatelly after or one year after the spill; animals had a high incidence of vacuolization of the digestive tubule epithelium. The incidence of parasitism and hemocytic infiltration also was higher in Maccoma. Clams Mya truncata were collected for biochemical analysis before, after and two weeks after the simulated oil spills. Concentations in the clam tissues of glucose, glycogen, trehalose, total lipid, and free amino acids were measured; free amino acids in adductor muscles were the most useful indices of pollutant stress. The results of the biochemical analyses indicate that Mya were not severely stressed by either dispersed oil or oil alone. After two weeks, clams from the dispersed oil bays were nearly normal, while those from the bay receiving oil alone appeared stressed. These results seem to corroborate results that the acute effects of dispersed oil are greater than those of undispersed oil, but effects of undispersed oil on infaunal molluscs develop more slowly and persist longer than those from dispersed oil. 43 refs., 2 figs., 6 tabs.

Genetic connectivity between north and south Mid-Atlantic Ridge chemosynthetic bivalves and their symbionts.

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Karina van der Heijden

Full Text Available Transform faults are geological structures that interrupt the continuity of mid-ocean ridges and can act as dispersal barriers for hydrothermal vent organisms. In the equatorial Atlantic Ocean, it has been hypothesized that long transform faults impede gene flow between the northern and the southern Mid-Atlantic Ridge (MAR and disconnect a northern from a southern biogeographic province. To test if there is a barrier effect in the equatorial Atlantic, we examined phylogenetic relationships of chemosynthetic bivalves and their bacterial symbionts from the recently discovered southern MAR hydrothermal vents at 5°S and 9°S. We examined Bathymodiolus spp. mussels and Abyssogena southwardae clams using the mitochondrial cytochrome c oxidase subunit I (COI gene as a phylogenetic marker for the hosts and the bacterial 16S rRNA gene as a marker for the symbionts. Bathymodiolus spp. from the two southern sites were genetically divergent from the northern MAR species B. azoricus and B. puteoserpentis but all four host lineages form a monophyletic group indicating that they radiated after divergence from their northern Atlantic sister group, the B. boomerang species complex. This suggests dispersal of Bathymodiolus species from north to south across the equatorial belt. 16S rRNA genealogies of chemoautotrophic and methanotrophic symbionts of Bathymodiolus spp. were inconsistent and did not match the host COI genealogy indicating disconnected biogeography patterns. The vesicomyid clam Abyssogena southwardae from 5°S shared an identical COI haplotype with A. southwardae from the Logatchev vent field on the northern MAR and their symbionts shared identical 16S phylotypes, suggesting gene flow across the Equator. Our results indicate genetic connectivity between the northern and southern MAR and suggest that a strict dispersal barrier does not exist.

Translating tumor biology into personalized treatment planning: analytical performance characteristics of the Oncotype DX® Colon Cancer Assay

International Nuclear Information System (INIS)

Clark-Langone, Kim M; Sangli, Chithra; Krishnakumar, Jayadevi; Watson, Drew

2010-01-01

The Oncotype DX ® Colon Cancer Assay is a new diagnostic test for determining the likelihood of recurrence in stage II colon cancer patients after surgical resection using fixed paraffin embedded (FPE) primary colon tumor tissue. Like the Oncotype DX Breast Cancer Assay, this is a high complexity, multi-analyte, reverse transcription (RT) polymerase chain reaction (PCR) assay that measures the expression levels of specific cancer-related genes. By capturing the biology underlying each patient's tumor, the Oncotype DX Colon Cancer Assay provides a Recurrence Score (RS) that reflects an individualized risk of disease recurrence. Here we describe its analytical performance using pre-determined performance criteria, which is a critical component of molecular diagnostic test validation. All analytical measurements met pre-specified performance criteria. PCR amplification efficiency for all 12 assays was high, ranging from 96% to 107%, while linearity was demonstrated over an 11 log 2 concentration range for all assays. Based on estimated components of variance for FPE RNA pools, analytical reproducibility and precision demonstrated low SDs for individual genes (0.16 to 0.32 C T s), gene groups (≤0.05 normalized/aggregate C T s) and RS (≤1.38 RS units). Analytical performance characteristics shown here for both individual genes and gene groups in the Oncotype DX Colon Cancer Assay demonstrate consistent translation of specific biology of individual tumors into clinically useful diagnostic information. The results of these studies illustrate how the analytical capability of the Oncotype DX Colon Cancer Assay has enabled clinical validation of a test to determine individualized recurrence risk after colon cancer surgery

Translating tumor biology into personalized treatment planning: analytical performance characteristics of the Oncotype DX® Colon Cancer Assay

Directory of Open Access Journals (Sweden)

Krishnakumar Jayadevi

2010-12-01

Full Text Available Abstract Background The Oncotype DX® Colon Cancer Assay is a new diagnostic test for determining the likelihood of recurrence in stage II colon cancer patients after surgical resection using fixed paraffin embedded (FPE primary colon tumor tissue. Like the Oncotype DX Breast Cancer Assay, this is a high complexity, multi-analyte, reverse transcription (RT polymerase chain reaction (PCR assay that measures the expression levels of specific cancer-related genes. By capturing the biology underlying each patient's tumor, the Oncotype DX Colon Cancer Assay provides a Recurrence Score (RS that reflects an individualized risk of disease recurrence. Here we describe its analytical performance using pre-determined performance criteria, which is a critical component of molecular diagnostic test validation. Results All analytical measurements met pre-specified performance criteria. PCR amplification efficiency for all 12 assays was high, ranging from 96% to 107%, while linearity was demonstrated over an 11 log2 concentration range for all assays. Based on estimated components of variance for FPE RNA pools, analytical reproducibility and precision demonstrated low SDs for individual genes (0.16 to 0.32 CTs, gene groups (≤0.05 normalized/aggregate CTs and RS (≤1.38 RS units. Conclusions Analytical performance characteristics shown here for both individual genes and gene groups in the Oncotype DX Colon Cancer Assay demonstrate consistent translation of specific biology of individual tumors into clinically useful diagnostic information. The results of these studies illustrate how the analytical capability of the Oncotype DX Colon Cancer Assay has enabled clinical validation of a test to determine individualized recurrence risk after colon cancer surgery.

Emerging and potential technologies for facilitating shrimp peeling: A review

DEFF Research Database (Denmark)

Dang, Tem Thi; Gringer, Nina; Jessen, Flemming

2018-01-01

, ultrasound and microwave can potentially become the alternatives since they have strong peeling effects on lobsters, crabs, bivalve mollusks, eggshells, human skin, fruits and vegetables. Also these technologies offer benefits such as short process time, retained nutritional and sensorial characteristics...

[Classification of organisms and structuralism in biology].

Science.gov (United States)

Vasil'eva, L I

2001-01-01

Structuralism in biology is the oldest trend oriented to the search for natural "laws of forms" comparable with laws of growth of crystal, was revived at the end of 20th century on the basis of structuralist thought in socio-humanitarian sciences. The development of principal ideas of the linguistic structuralism in some aspects is similar to that of biological systematics, especially concerning the relationships between "system" and "evolution". However, apart from this general similarity, biological structuralism is strongly focused on familiar problems of the origin of diversity in nature. In their striving for the renovation of existing views, biological structuralists oppose the neo-darwinism emphasizing the existence of "law of forms", that are independent on heredity and genetic "determinism". The trend to develop so-called "rational taxonomy" is also characteristic of biological structuralism but this attempt failed being connected neither with Darwin's historicism nor with Plato's typology.

Synchrotron Radiation in Biology and Medicine

International Nuclear Information System (INIS)

Pelka, J.B.

2008-01-01

This work is focused on a present status of synchrotron radiation X-ray applications in medicine and biology to imaging, diagnostics, and radio- therapy. Properties of X-ray beams generated by synchrotron sources are compared with radiation produced by classical laboratory X-ray tubes. A list of operating and planned synchrotron facilities applicable to biomedical purposes is given, together with their basic characteristics. A concise overview of typical X-ray synchrotron techniques in biology and medicine is carried out with discussion of their specific properties and examples of typical results. (author)

Comparison of biological characteristics of mesenchymal stem cells grown on two different titanium implant surfaces

International Nuclear Information System (INIS)

Wang Chengyue; Zhao Baohong; Ai Hongjun; Wang Yiwei

2008-01-01

This study examined the biological characteristics of mesenchymal stem cells (MSCs) grown on sand-blasted, large-grit, acid-etched (SLA) surface and hydroxyapatite (HA) coating on the SLA (HA/SLA) surface of titanium dental implants. The HA/SLA surfaces of titanium dental implants were formed by the ion beam assisted deposition (IBAD) method. Rabbit bone marrow derived mesenchymal stem cells cultured in vitro were seeded onto the surface of SLA and HA/SLA; the growth states of MSCs on the two samples were observed by a scanning electron microscope; the proliferation index, alkaline phosphatase (ALP) activity, osteocalcin (OCN) content of MSCs and mRNA relative expression level of osteopontin (opn) were compared between two groups. MSCs were found to be easier to adhere to the HA/SLA surface compared to the SLA surface. At the same time, the ALP activity and the OCN content of MSCs grown on the HA/SLA surface were obviously higher, and the relative expression level of opn mRNA was 4.78 times higher than that on the SLA surface. The HA coating formed by the IBAD method on the SLA surface of titanium dental implants significantly improves proliferation and well-differentiated osteoblastic phenotype of MSCs, which indicates a promising method for the surface modification of titanium dental implants

Population biology and diet of the southern kingcroaker Menticirrhus americanus (Linnaeus, 1758 (Perciformes: Sciaenidae in Caraguatatuba Bay, southeastern Brazil

Directory of Open Access Journals (Sweden)

Alexander Turra

2012-09-01

Full Text Available This study evaluated the spatio-temporal distribution, population biology and diet of Menticirrhus americanus in Caraguatatuba Bay. Samples were taken monthly between August 2003 and October 2004, by trawling in two previously selected areas. The northern area is more exposed to wave activity and is influenced by a river, functioning as a small estuary. In contrast, the southern area is relatively sheltered from wave energy and influenced to a lesser degree by smaller rivers. The fishes' length was measured, and the sex and gonadal stage macroscopically identified. The abundance of this species was compared between areas and among months. The diet was identified and quantified. M. americanus occurred in equal proportions in the two study areas, being most abundant in April 2004, followed by December 2003 and January 2004. The population was dominated by small immature individuals. The few individuals in maturation or mature that were captured showed no seasonal pattern of distribution. This species had a varied diet, feeding on worms (nemerteans, sipunculans and echiurans, mollusks (bivalves and cephalopods, polychaetes, crustaceans and fish. The presence of intact nematodes in the intestine suggests that these are parasites. The results demonstrated that M. americanus has a homogeneous spatial and temporal distribution in Caraguatatuba Bay, being uniformly distributed between the south and north areas as well as across the months. This species can be considered a carnivorous predator, showing a preference for consuming benthic sandy-beach species such as glycerids and other polychaetes, crustaceans, and bivalve siphons.Este estudo teve como objetivo avaliar a distribuição espaço-temporal, biologia populacional e dieta de Menticirrhus americanus da baía de Caraguatatuba. Foram realizadas coletas mensais entre agosto de 2003 a outubro de 2004, utilizando redes de arrasto em duas áreas previamente selecionadas. A área norte é mais expostas

Omics/systems biology and cancer cachexia.

Science.gov (United States)

Gallagher, Iain J; Jacobi, Carsten; Tardif, Nicolas; Rooyackers, Olav; Fearon, Kenneth

2016-06-01

Cancer cachexia is a complex syndrome generated by interaction between the host and tumour cells with a background of treatment effects and toxicity. The complexity of the physiological pathways likely involved in cancer cachexia necessitates a holistic view of the relevant biology. Emergent properties are characteristic of complex systems with the result that the end result is more than the sum of its parts. Recognition of the importance of emergent properties in biology led to the concept of systems biology wherein a holistic approach is taken to the biology at hand. Systems biology approaches will therefore play an important role in work to uncover key mechanisms with therapeutic potential in cancer cachexia. The 'omics' technologies provide a global view of biological systems. Genomics, transcriptomics, proteomics, lipidomics and metabolomics approaches all have application in the study of cancer cachexia to generate systems level models of the behaviour of this syndrome. The current work reviews recent applications of these technologies to muscle atrophy in general and cancer cachexia in particular with a view to progress towards integration of these approaches to better understand the pathology and potential treatment pathways in cancer cachexia. Copyright © 2016. Published by Elsevier Ltd.

Culture, Urbanism and Changing Human Biology.

Science.gov (United States)

Schell, L M

2014-04-03

Anthropologists have long known that human activity driven by culture changes the environment. This is apparent in the archaeological record and through the study of the modern environment. Perhaps the largest change since the paleolithic era is the organization of human populations in cities. New environments can reshape human biology through evolution as shown by the evolution of the hominid lineage. Evolution is not the only process capable of reshaping our biology. Some changes in our human biology are adaptive and evolutionary while others are pathological. What changes in human biology may be wrought by the modern urban environment? One significant new change in the environment is the introduction of pollutants largely through urbanization. Pollutants can affect human biology in myriad ways. Evidence shows that human growth, reproduction, and cognitive functioning can be altered by some pollutants, and altered in different ways depending on the pollutant. Thus, pollutants have significance for human biologists and anthropologists generally. Further, they illustrate the bio-cultural interaction characterizing human change. Humans adapt by changing the environment, a cultural process, and then change biologically to adjust to that new environment. This ongoing, interactive process is a fundamental characteristic of human change over the millennia.

Latitudinal variation in the reproductive cycle of two bivalves with contrasting biogeographical origin along the Humboldt Current Upwelling Ecosystem

Directory of Open Access Journals (Sweden)

Roberto A. Uribe

2012-10-01

Full Text Available Argopecten purpuratus (Lamarck, 1819 and Mesodesma donacium (Lamarck, 1818 are bivalves that inhabit the Humboldt Current Upwelling Ecosystem. They have contrasting biogeographical origins, suggesting that their responses to exogenous factors should differ. Using circular statistics, we examine synchrony/asynchrony in the reproductive cycle between populations of each species. The results indicate that there is reproductive asynchrony in both species along their distributional range. However, there was synchrony for A. purpuratus in several location-pairs, including Paita-Chimbote, Chimbote-Callao, Callao-Pisco and Pisco-Antofagasta. For M. donacium, there were only two synchronic groups: Camaná-Capellanía-Mehuín and Hornitos-Peñuelas-Longotoma-La Ligua-Cucao-Quilanlar. A. purpuratus showed gametogenenic activity throughout the year. In contrast, M. donacium showed strong seasonality, with gametogenesis in winter and spawning in spring/summer. In conclusion, the patterns observed for these sympatric species suggest that on a large scale the reproductive cycles follow the expected patterns for the contrasting biogeographic origin of each species, so it could be argued that they are modulated by endogenous factors. However, at a local scale, the reproductive cycles of these species show variation, likely determined by local oceanographic or hydrographic processes.

A humidity sensitive two-dimensional tunable amorphous photonic structure in the outer layer of bivalve ligament from Sunset Siliqua

International Nuclear Information System (INIS)

Zhang, Weigang; Zhang, Gangsheng

2015-01-01

A humidity sensitive two-dimensional tunable amorphous photonic structure (2D TAPS) in the outer layer of bivalve ligament from Sunset Siliqua (OLLS) was reported in this paper. The structural color and microstructure of OLLS were investigated by reflection spectra and scanning electron microscopy, respectively. The results indicate that the reflection peak wavelength of the wet OLLS blue-shifts from 454 nm to 392 nm with the increasing of air drying time from 0 to 40 min, while the reflectivity decreases gradually and vanishes at last, relevant color changes from blue to black background color. The structural color in the OLLS is produced by a two-dimensional amorphous photonic structure consisting of aligned protein fibers, in which the diameter of protein fiber and the inter-fiber spacing are 101 ± 12 nm. Water can reversibly tune the reflection peak wavelength and reflectivity of this photonic structure, and the regulation achieved through dynamically tuning the interaction between inter-fiber spacing and average refractive index. - Highlights: • A humidity sensitive two-dimensional tunable amorphous photonic structure • Water can reversibly tune the reflection peak wavelength and reflectivity of this photonic structure. • This photonic structure may yield very useful template for artificial structures

A humidity sensitive two-dimensional tunable amorphous photonic structure in the outer layer of bivalve ligament from Sunset Siliqua

Energy Technology Data Exchange (ETDEWEB)

Zhang, Weigang, E-mail: abczwg15@163.com [College of Materials and Chemical Engineering, Chuzhou University, Chuzhou 239000 (China); Zhang, Gangsheng [College of Material Science and Technology, Guangxi University, Nanning 530004 (China)

2015-07-01

A humidity sensitive two-dimensional tunable amorphous photonic structure (2D TAPS) in the outer layer of bivalve ligament from Sunset Siliqua (OLLS) was reported in this paper. The structural color and microstructure of OLLS were investigated by reflection spectra and scanning electron microscopy, respectively. The results indicate that the reflection peak wavelength of the wet OLLS blue-shifts from 454 nm to 392 nm with the increasing of air drying time from 0 to 40 min, while the reflectivity decreases gradually and vanishes at last, relevant color changes from blue to black background color. The structural color in the OLLS is produced by a two-dimensional amorphous photonic structure consisting of aligned protein fibers, in which the diameter of protein fiber and the inter-fiber spacing are 101 ± 12 nm. Water can reversibly tune the reflection peak wavelength and reflectivity of this photonic structure, and the regulation achieved through dynamically tuning the interaction between inter-fiber spacing and average refractive index. - Highlights: • A humidity sensitive two-dimensional tunable amorphous photonic structure • Water can reversibly tune the reflection peak wavelength and reflectivity of this photonic structure. • This photonic structure may yield very useful template for artificial structures.

Karakteristik Beberapa Sifat Fisik, Kimia, Dan Biologi Tanah Pada Sistem Pertanian Organik

OpenAIRE

Rizky Dharmawan Margolang,, Rizky Dharmawan Margolang; Jamilah, Jamila; Sembiring, Mariani

2015-01-01

The purpose of the study to determine the characteristis of some of the physical, chemical, and biological properties of soil in organic farming systems. The study was held about 6 month from November 2013 to April 2014 in Bioenvironment Education Center of Organic Farming Bahorok in Timbang Lawan village, Bahorok, at Langkat district for observe the characteristic of some physical, chemical, and biological characteristic of soil in organic farming system. This research was conducted with sur...

Marine pollution detection through biomarkers in marine bivalves

Digital Repository Service at National Institute of Oceanography (India)

Verlecar, X.N.; Pereira, N.; Desai, S.R.; Jena, K.B.; Snigdha

ous physiological and biochemical parameters in resident b i ota. Use of the so - called ?biomarker? has been adopted from i demiology? or ?molecular toxicology? by free - radical biologists to describe changes in biolog i cal molec ules out... of attack by free radicals like oxygen, nitrogen or ha l- ide species, in dealing with aquatic toxico l ogy 6 . In this context, the cytochrome P450 - linked mixed function ox y- genase (MFO) enzyme system has been extensively stu d ied 7...

Biologic Therapy and Asthma.

Science.gov (United States)

Viswanathan, Ravi K; Busse, William W

2018-02-01

Although airway inflammation is an intrinsic and key feature of asthma, this response varies in its intensity and translation to clinical characteristics and responsiveness to treatment. The observations that clinical heterogeneity is an important aspect of asthma and a feature that likely dictates and determines responses to treatment in severe asthma, patient responsiveness to medication is incomplete, and risks for exacerbation are increased. The development of biologics, which target selected and specific components of inflammation, has been a promising advance to achieve asthma control in patients with severe disease. This article reviews the current biologics available and under development and how their use has affected asthma and which subpopulations appear to benefit the greatest. Thieme Medical Publishers 333 Seventh Avenue, New York, NY 10001, USA.

Ecology and culturing of edible bivalves in Goa

Digital Repository Service at National Institute of Oceanography (India)

Parulekar, A.H.; Nair, S.A.; Ansari, Z.A.; Harkantra, S.N.; Chatterji, A.; Ingole, B.S.; Roy, J.M.

Environmental characteristics, growth rate, total production and technically feasible methods for the mass cultivation of Meretrix casta, Paphia malabarica, Villorita cyprinoides, Donax incarnatus, Perna viridis, Modiolus metcalfei and Crassostrea...

Textbooks for biology applied in schools in Russia

Directory of Open Access Journals (Sweden)

Sergey Vitalevich Sumatokhin

2018-04-01

Full Text Available This article describes textbooks that are used in the teaching of biology in schools in Russia. The characteristics of designing biological programme content are presented. The school textbook, as a book, consists of a system of texts, illustrations, apparatus for acquiring knowledge (methodical apparatus and elements for orientation in the presented contents. In the textbook of biology, different types of texts are distinguished: basic, additional, explanatory. In Russia, biology textbooks for the school public more than ten publishers. A set of biology textbooks, ensuring the continuity of the study of biology in grades 5-9 (10-11 is called the subject line. Authors of different subject lines of textbooks differently select and structure the content of biological education. Depending on the approach to the structuring of the educational material, all subject lines of textbooks can be divided into two groups (system-structural approach and functional approach. These approaches can have a linear or concentric content structure. Each teacher has the right to choose from the variety of subject lines of biology textbooks those that most satisfy his needs.

Covarying Shell Growth Parameters and the Regulation of Shell Shape in Marine Bivalves: A Case Study on Tellinoidea

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Jean Béguinot

2014-01-01

Full Text Available Specific parameters characterising shell shape may arguably have a significant role in the adaptation of bivalve molluscs to their particular environments. Yet, such functionally relevant shape parameters (shell outline elongation, dissymmetry, and ventral convexity are not those parameters that the animal may directly control. Rather than shell shape, the animal regulates shell growth. Accordingly, an alternative, growth-based description of shell-shape is best fitted to understand how the animal may control the achieved shell shape. The key point is, in practice, to bring out the link between those two alternative modes of shell-shape descriptions, that is, to derive the set of equations which connects the growth-based shell-shape parameters to the functionally relevant shell-shape parameters. Thus, a preliminary object of this note is to derive this set of equations as a tool for further investigations. A second object of this work is to provide an illustrative example of implementation of this tool. I report on an unexpected negative covariance between growth-based parameters and show how this covariance results in a severe limitation of the range of interspecific variability of the degree of ventral convexity of the shell outline within the superfamily Tellinoidea. Hypotheses are proposed regarding the constraints possibly at the origin of this limitation of interspecific variability.

Experimental Assessment of the Effects of Temperature and Food Availability on Particle Mixing by the Bivalve Abra alba Using New Image Analysis Techniques.

Science.gov (United States)

Bernard, Guillaume; Duchêne, Jean-Claude; Romero-Ramirez, Alicia; Lecroart, Pascal; Maire, Olivier; Ciutat, Aurélie; Deflandre, Bruno; Grémare, Antoine

2016-01-01

The effects of temperature and food addition on particle mixing in the deposit-feeding bivalve Abra alba were assessed using an experimental approach allowing for the tracking of individual fluorescent particle (luminophore) displacements. This allowed for the computations of vertical profiles of a set of parameters describing particle mixing. The frequency of luminophore displacements (jumps) was assessed through the measurement of both waiting times (i.e., the time lapses between two consecutive jumps of the same luminophore) and normalized numbers of jumps (i.e., the numbers of jumps detected in a given area divided by the number of luminophores in this area). Jump characteristics included the direction, duration and length of each jump. Particle tracking biodiffusion coefficients (Db) were also computed. Data originated from 32 experiments carried out under 4 combinations of 2 temperature (Te) and 2 food addition (Fo) levels. For each of these treatments, parameters were computed for 5 experimental durations (Ed). The effects of Se, Fo and Ed were assessed using PERmutational Multivariate ANalyses Of VAriance (PERMANOVAs) carried out on vertical depth profiles of each particle mixing parameter. Inversed waiting times significantly decreased with Ed whereas the normalized number of jumps did not, thereby suggesting that it constitutes a better proxy of jump frequency when assessing particle mixing based on the measure of individual particle displacements. Particle mixing was low during autumn temperature experiments and not affected by Fo, which was attributed to the dominant effect of low temperature. Conversely, particle mixing was high during summer temperature experiments and transitory inhibited by food addition. This last result is coherent with the functional responses (both in terms of activity and particle mixing) already measured for individual of the closely related clam A. ovata originating from temperate populations. It also partly resulted from a

El Niño impact on mollusk biomineralization-implications for trace element proxy reconstructions and the paleo-archeological record.

Directory of Open Access Journals (Sweden)

Alberto Pérez-Huerta

Full Text Available Marine macroinvertebrates are ideal sentinel organisms to monitor rapid environmental changes associated with climatic phenomena. These organisms build up protective exoskeletons incrementally by biologically-controlled mineralization, which is deeply rooted in long-term evolutionary processes. Recent studies relating potential rapid environmental fluctuations to climate change, such as ocean acidification, suggest modifications on carbonate biominerals of marine invertebrates. However, the influence of known, and recurrent, climatic events on these biological processes during active mineralization is still insufficiently understood. Analysis of Peruvian cockles from the 1982-83 large magnitude El Niño event shows significant alterations of the chemico-structure of carbonate biominerals. Here, we show that bivalves modify the main biomineralization mechanism during the event to continue shell secretion. As a result, magnesium content increases to stabilize amorphous calcium carbonate (ACC, inducing a rise in Mg/Ca unrelated to the associated increase in sea-surface temperature. Analysis of variations in Sr/Ca also suggests that this proxy should not be used in these bivalves to detect the temperature anomaly, while Ba/Ca peaks are recorded in shells in response to an increase in productivity, or dissolved barium in seawater, after the event. Presented data contribute to a better understanding of the effects of abrupt climate change on shell biomineralization, while also offering an alternative view of bivalve elemental proxy reconstructions. Furthermore, biomineralization changes in mollusk shells can be used as a novel potential proxy to provide a more nuanced historical record of El Niño and similar rapid environmental change events.

Synthetic biology analysed tools for discussion and evaluation

CERN Document Server

2016-01-01

Synthetic biology is a dynamic, young, ambitious, attractive, and heterogeneous scientific discipline. It is constantly developing and changing, which makes societal evaluation of this emerging new science a challenging task, prone to misunderstandings. Synthetic biology is difficult to capture, and confusion arises not only regarding which part of synthetic biology the discussion is about, but also with respect to the underlying concepts in use. This book offers a useful toolbox to approach this complex and fragmented field. It provides a biological access to the discussion using a 'layer' model that describes the connectivity of synthetic or semisynthetic organisms and cells to the realm of natural organisms derived by evolution. Instead of directly reviewing the field as a whole, firstly our book addresses the characteristic features of synthetic biology that are relevant to the societal discussion. Some of these features apply only to parts of synthetic biology, whereas others are relevant to synthetic bi...

Progress in hprt mutation assay and its application in radiation biology

International Nuclear Information System (INIS)

He Jing; Li Qiang

2008-01-01

hprt gene is an X-linked locus that has been well studied and widely used as a bio-marker in mutation detection, hprt mutation assay is a gene mutation test system in mammalian cells in vitro which has been used as a biological dosimeter. In this paper, the biological characteristics of hprt gene, hprt mutation detection methodology and the application of hprt mutation assay in radiation biology are comprehensively reviewed. (authors)

Horns Rev offshore wind farm. Environmental impact assessment of sea bottom and marine biology

Energy Technology Data Exchange (ETDEWEB)

Leonhard, S.B.

2000-03-15

An Environmental Impact Assessment (EIA) of a planned 150 MW offshore wind farm at Horns Rev has been carried out for the marine biology and sea bottom in the area, and includes vegetation and benthic fauna. The study forms part of a total EIA of the planned offshore wind farm. This EIA study has been drawn up in accordance with the guidelines laid down by the Ministry of Environment and Energy in the publication, 'Guidelines for preparation of EIAstudies for offshore wind farms. Horns Rev is situated off Blaevands Huk, which is Denmark's most westerly point. It is a shallow reef with water depths between 2 and 9 metres and is primarily composed of sand, gravel and pebbles. The area designated for the wind farm lies directly south of Horns Rev and is dominated by sand with a median particle size of 0.3 mm. Along the edges, towards areas of greater depth, the particle size increases. There are areas of fine sand in the deepest area, and in isolated pockets within the proposed wind farm site. The sediment is characterised by a very low (<1%) organic matter content. On the basis of the expected impact from the establishment of the wind farm, it is not deemed necessary to carry out special programmes during the construction phase for monitoring of the environmental-biological conditions. A monitoring and control programme is recommended during the production phase in order to follow the copper concentration in bivalves, or alternatively to initiate recovery or elimination of the copper-laden waste. A control programme is recommended during the production phase in order to follow the establishment and succession of the fouling community on the wind turbine foundations and scour-protecting revetments. (BA)

Horns Rev offshore wind farm. Environmental impact assessment of sea bottom and marine biology

Energy Technology Data Exchange (ETDEWEB)

Leonhard, S B

2000-03-15

An Environmental Impact Assessment (EIA) of a planned 150 MW offshore wind farm at Horns Rev has been carried out for the marine biology and sea bottom in the area, and includes vegetation and benthic fauna. The study forms part of a total EIA of the planned offshore wind farm. This EIA study has been drawn up in accordance with the guidelines laid down by the Ministry of Environment and Energy in the publication, 'Guidelines for preparation of EIAstudies for offshore wind farms. Horns Rev is situated off Blaevands Huk, which is Denmark's most westerly point. It is a shallow reef with water depths between 2 and 9 metres and is primarily composed of sand, gravel and pebbles. The area designated for the wind farm lies directly south of Horns Rev and is dominated by sand with a median particle size of 0.3 mm. Along the edges, towards areas of greater depth, the particle size increases. There are areas of fine sand in the deepest area, and in isolated pockets within the proposed wind farm site. The sediment is characterised by a very low (<1%) organic matter content. On the basis of the expected impact from the establishment of the wind farm, it is not deemed necessary to carry out special programmes during the construction phase for monitoring of the environmental-biological conditions. A monitoring and control programme is recommended during the production phase in order to follow the copper concentration in bivalves, or alternatively to initiate recovery or elimination of the copper-laden waste. A control programme is recommended during the production phase in order to follow the establishment and succession of the fouling community on the wind turbine foundations and scour-protecting revetments. (BA)

Biological evolution: Some genetic considerations | Salem ...

African Journals Online (AJOL)

Conclusion: Natural selection might be observed in nature but not in life. The concept of biological evolution is an illogic and insensible hypothesis since it stands in direct contradiction with our current knowledge regarding the behavior as well as the structural and functional characteristics of the human genome and human ...

Function-Based Algorithms for Biological Sequences

Science.gov (United States)

Mohanty, Pragyan Sheela P.

2015-01-01

Two problems at two different abstraction levels of computational biology are studied. At the molecular level, efficient pattern matching algorithms in DNA sequences are presented. For gene order data, an efficient data structure is presented capable of storing all gene re-orderings in a systematic manner. A common characteristic of presented…

Biological characteristics and clinical outcome of triple negative primary breast cancer in older women - comparison with their younger counterparts.

Directory of Open Access Journals (Sweden)

Binafsha M Syed

Full Text Available Triple negative (ER, PgR and HER2 negative breast cancers (TNBCs are often considered as a poor prognostic phenotype. There is dearth of evidence showing the prevalence and biological behaviour of TNBCs in older women. This study aimed to analyse their biological characteristics in comparison with a well characterised younger series from a single centre with long term clinical follow-up. Over 37 years (1973-2010, 1,758 older (≥70 years women with early operable (<5 cm primary breast cancer were managed in a dedicated clinic and have complete clinical information available. Of these 813 patients underwent primary surgery and 575 had good quality tumour samples available for tissue microarray analysis using indirect immunohistochemistry. A total of 127 patients (22.1% had TNBCs and full biological analysis of 15 biomarkers was performed. The results were compared with those of their younger (<70 years counterparts 342 (18.9% from a previously characterised, consecutive series of primary breast cancer treated in the same unit (1986-1998. The 127 older patients with TNBCs showed lower rates of Ki67 and CK 7/8 positivity and high rates of bcl2 and CK18 positivity when compared with their younger counterparts (p<0.05. There was no significant difference in the long term clinical outcome between the two age groups, despite the fact that 47% of the younger patients had adjuvant chemotherapy, while none in the older cohort received such treatment. EGFR, axillary stage and pathological size showed prognostic significance in older women with TNBCs on univariate analysis. Despite not having received adjuvant chemotherapy, the older series had clinical outcome similar to the younger patients almost half of whom had chemotherapy. This appears to be related to other biomarkers (in addition to ER/PgR/HER2 eg Ki67, bcl2 and cytokeratins which have different expression patterns influencing prognosis.

Effect of host and food availability on the biological characteristics of Trichogramma galloi Zucchi (Hymenoptera, Trichogrammatidae); Efeito da disponibilidade de hospedeiro e de alimento nas caracteristicas biologicas de Trichogramma galloi Zucchi (Hymenoptera, Trichogrammatidae)

Energy Technology Data Exchange (ETDEWEB)

Pratissoli, Dirceu; Oliveira, Harley N. de; Oliveira, Regiane C. de; Zago, Hugo B. [Universidade Federal do Espirito Santo (UFES), Alegre, ES (Brazil). Centro de Ciencias Agrarias], e-mail: dirceu@npd.ufes.br, e-mail: hnoliveira@insecta.ufv.br; Vieira, Stella M.J. [Universidade Federal de Vicosa (UFV), MG (Brazil). Dept. de Engenharia Agricola

2004-03-15

Effect of host and food availability on the biological characteristics of Trichogramma galloi Zucchi (Hymenoptera, Trichogrammatidae). Biological characteristics of Trichogramma galloi Zucchi, 1988 were evaluated in laboratory where these parasitoids were reared on eggs of Diatraea saccharalis (Lepidoptera, Pyralidae) with or without honey, and exposed to eggs of the host after 0, 6, 12, 24, 36, 48, 60, 72 and 84 hours of emergence. The parasitism rate and viability showed higher for individuals that received food. The sex ratio was not influenced by food. The number of individuals per egg only showed difference for those adults that did not receive food and stayed six hours without the host eggs. Checking the effect of the availability of eggs, only the sex ratio, with or without honey, did not show differences. The results show that T. galloi needs a carbohydrate supply and the time can influence the reproductive capacity. (author)

Molecular characteristics of hemoglobins in blood clam and their immune responses to bacterial infection.

Science.gov (United States)

Xu, Bin; Zhang, Yanan; Jing, Zhao; Fan, Tingjun

2017-06-01

Bivalve hemoglobins have antibacterial activities, while the underlying mechanisms remain poorly understood. In our study, three full-length cDNAs of hemoglobins from blood clam skHbs were obtained, encoding putative polypeptides of 147, 150, and 152 amino acids, respectively. Predicted advanced protein structures showed that the skHbs had amphipathic antibacterial structures, displayed the typical structural characteristics of proteins with globin-like fold containing numerous alpha-helixes, and forming a homodimeric skHbI and a heterotetrameric skHbII complex. After injected with alive and heat-killed Gram-positive bacteria Bacillus subtilis, the mRNA levels of skHbI and skHbII were both significantly upregulated through increasing the expression of peptidoglycan recognition protein-like (PGRP-like) protein and Toll-like receptor (TLR-like) protein induced by peptidoglycan on the surface of the bacteria, but there were no obvious differences in their protein levels. Besides, reactive oxygen species (ROS) was detected to participate in the resistance to B. subtilis. These implied that skHbs could involve in the innate immune responses to Gram-positive bacterial infection directly with their amphipathic structures and indirectly by increasing ROS production through PGRP triggering Toll pathway. In conclusion, our findings reveal the structural characteristics of skHbs and their mechanism against Gram-positive bacteria thereby providing the molecular evidence for fundamental innate antibacterial activities by invoking respiratory proteins. Copyright © 2017 Elsevier B.V. All rights reserved.

[Biological characteristics of mesenchymal stem cell and hematopoietic stem cell in the co-culture system].

Science.gov (United States)

Wei, Wei; Xu, Chao; Ye, Zhi-Yong; Huang, Xiao-Jun; Yuan, Jia-En; Ma, Tian-Bao; Lin, Han-Biao; Chen, Xiu-Qiong

2016-10-25

The aim of the present study was to obtain the qualified hematopoietic stem/progenitor cells (HSC/HPC) and human umbilical cord-mesenchymal stem cells (MSC) in vitro in the co-culture system. Cord blood mononuclear cells were separated from umbilical cord blood by Ficoll lymphocyte separation medium, and then CD34 + HSC was collected by MACS immunomagnetic beads. The selected CD34 + HSC/HPC and MSC were transferred into culture flask. IMDM culture medium with 15% AB-type cord plasma supplemented with interleukin-3 (IL-3), IL-6, thrombopoietin (TPO), stem cell factor (SCF) and FMS-like tyrosine kinase 3 ligand (Flt-3L) factors were used as the co-culture system for the amplification of HSC/HPC and MSC. The cellular growth status and proliferation on day 6 and 10 after co-culture were observed by using inverted microscope. The percentage of positive expression of CD34 in HSC/HPC, as well as the percentages of positive expressions of CD105, CD90, CD73, CD45, CD34 and HLA-DR in the 4 th generation MSC, was tested by flow cytometry. Semisolid colony culture was used to test the HSC/HPC colony forming ability. The osteogenic, chondrogenesis and adipogenic ability of the 4 th generation MSC were assessed. The karyotype analysis of MSC was conducted by colchicines. The results demonstrated that the HSC/HPC of co-culture group showed higher ability of amplification, CFU-GM and higher CD34 + percentage compared with the control group. The co-cultured MSC maintained the ability to differentiate into bone cells, fat cells and chondrocytes. And the karyotype stability of MSC remained normal. These results reveal that the appropriate co-culture system for MSC and HSC is developed, and via this co-culture system we could gain both two kinds of these cells. The MSCs under the co-culture system maintain the biological characteristics. The CFU-GM ability, cell counting and the flow cytometry results of HSC/HPC under the co-culture system are conform to the criterion, showing that

Uranium(VI) speciation: modelling, uncertainty and relevance to bioavailability models. Application to uranium uptake by the gills of a freshwater bivalve; Speciation de l'uranium(6), modelisation, incertitude et implication pour les modeles de biodisponibilite. Application a l'accumulation dans les branchies d'un bivalve d'eau douce

Energy Technology Data Exchange (ETDEWEB)

Denison, F.H

2004-07-01

The effects of varying solution composition on the interactions between uranium(VI) and excised gills of the freshwater bivalve Corbicula fluminea have been investigated in well defined solution media. A significant reduction in the uptake of uranium was observed on increasing the concentrations of the uranium complexing ligands citrate and carbonate. Saturation kinetics as a function of uranium concentration at a pH value of 5.0 were observed, indicating that the uptake of uranium is a facilitated process, probably involving one or several trans-membrane transport systems. A relatively small change in the uptake of uranium was found as a function of pH (factor of ca. 2), despite the extremely large changes to the solution speciation of uranium within the range of pH investigated (5.0 - 7.5). A comprehensive review of the thermodynamic data relevant to the solution composition domain employed for this study was performed. Estimates of the uncertainties for the formation constants of aqueous uranium(VI) species were integrated into a thermodynamic database. A computer program was written to predict the equilibrium distribution of uranium(VI) in simple aqueous systems, using thermodynamic parameter mean-values. The program was extended to perform Monte Carlo and Quasi Monte Carlo uncertainty analyses, incorporating the thermodynamic database uncertainty estimates, to quantitatively predict the uncertainties inherent in predicting the solution speciation of uranium. The use of thermodynamic equilibrium modelling as a tool for interpreting the bioavailability of uranium(VI) was investigated. Observed uranium(VI) uptake behaviour was interpreted as a function of the predicted changes to the solution speciation of uranium. Different steady-state or pre-equilibrium approaches to modelling uranium uptake were tested. Alternative modelling approaches were also tested, considering the potential changes to membrane transport system activity or sorption characteristics on

Biological cellular response to carbon nanoparticle toxicity

International Nuclear Information System (INIS)

Panessa-Warren, B J; Warren, J B; Wong, S S; Misewich, J A

2006-01-01

Recent advances in nanotechnology have increased the development and production of many new nanomaterials with unique characteristics for industrial and biomedical uses. The size of these new nanoparticles (<100 nm) with their high surface area and unusual surface chemistry and reactivity poses unique problems for biological cells and the environment. This paper reviews the current research on the reactivity and interactions of carbon nanoparticles with biological cells in vivo and in vitro, with ultrastructural images demonstrating evidence of human cell cytotoxicity to carbon nanoparticles characteristic of lipid membrane peroxidation, gene down regulation of adhesive proteins, and increased cell death (necrosis, apoptosis), as well as images of nontoxic carbon nanoparticle interactions with human cells. Although it is imperative that nanomaterials be systematically tested for their biocompatibility and safety for industrial and biomedical use, there are now ways to develop and redesign these materials to be less cytotoxic, and even benign to cell systems. With this new opportunity to utilize the unique properties of nanoparticles for research, industry and medicine, there is a responsibility to test and optimize these new nanomaterials early during the development process, to eliminate or ameliorate identified toxic characteristics

Thiosemicarbazones: preparation methods, synthetic applications and biological importance

International Nuclear Information System (INIS)

Tenorio, Romulo P.; Goes, Alexandre J.S.; Lima, Jose G. de; Faria, Antonio R. de; Alves, Antonio J.; Aquino, Thiago M. de

2005-01-01

Thiosemicarbazones are a class of compounds known by their chemical and biological properties, such as antitumor, antibacterial, antiviral and antiprotozoal activity. Their ability to form chelates with metals has great importance in their biological activities. Their synthesis is very simple, versatile and clean, usually giving high yields. They are largely employed as intermediates, in the synthesis of others compounds. This article is a survey of some of these characteristics showing their great importance to organic and medicinal chemistry. (author)

Tributyltin accumulation and effects in marine molluscs from West Greenland

Energy Technology Data Exchange (ETDEWEB)

Strand, J.; Asmund, G

2003-05-01

Tributyltin is accumulated in marine molluscs living in Greenland, with the highest levels found in harbour areas. - The levels of the antifouling agent tributyltin (TBT) and its breakdown products in bivalves were investigated in 1999-2000 at six areas along the west coast of Greenland with focus on locations inside and outside harbours. In addition female gastropods were examined for the development of TBT-induced masculine characteristics in form of imposex or intersex. The highest TBT concentration, 254 ng g{sup -1} ww, was found in the bivalve Mytilus edulis sampled inside Nuuk harbour, but significant TBT concentrations were also present in bivalves from the other harbour areas. Only low levels of TBT were detected in bivalves sampled outside the harbours and in several of the samples the TBT level was below the detection limit. The examination of neogastropods like Buccinum revealed that imposex development occurred in all the harbours. In contrast, imposex was not found in any neogastropods sampled outside the harbour areas. However, the value of marine neogastropods as indicators of TBT contamination in West Greenland seems limited, because of large species diversity and the difficulties in sampling enough specimens at least with the current sampling strategy. No effects, which could be related to TBT contamination, were found in the most abundant tidal gastropod in West Greenland, Littorina saxatilis.

Tributyltin accumulation and effects in marine molluscs from West Greenland

International Nuclear Information System (INIS)

Strand, J.; Asmund, G.

2003-01-01

Tributyltin is accumulated in marine molluscs living in Greenland, with the highest levels found in harbour areas. - The levels of the antifouling agent tributyltin (TBT) and its breakdown products in bivalves were investigated in 1999-2000 at six areas along the west coast of Greenland with focus on locations inside and outside harbours. In addition female gastropods were examined for the development of TBT-induced masculine characteristics in form of imposex or intersex. The highest TBT concentration, 254 ng g -1 ww, was found in the bivalve Mytilus edulis sampled inside Nuuk harbour, but significant TBT concentrations were also present in bivalves from the other harbour areas. Only low levels of TBT were detected in bivalves sampled outside the harbours and in several of the samples the TBT level was below the detection limit. The examination of neogastropods like Buccinum revealed that imposex development occurred in all the harbours. In contrast, imposex was not found in any neogastropods sampled outside the harbour areas. However, the value of marine neogastropods as indicators of TBT contamination in West Greenland seems limited, because of large species diversity and the difficulties in sampling enough specimens at least with the current sampling strategy. No effects, which could be related to TBT contamination, were found in the most abundant tidal gastropod in West Greenland, Littorina saxatilis

Discovery of chemoautotrophic symbiosis in the giant shipworm Kuphus polythalamia (Bivalvia: Teredinidae) extends wooden-steps theory.

Science.gov (United States)

Distel, Daniel L; Altamia, Marvin A; Lin, Zhenjian; Shipway, J Reuben; Han, Andrew; Forteza, Imelda; Antemano, Rowena; Limbaco, Ma Gwen J Peñaflor; Tebo, Alison G; Dechavez, Rande; Albano, Julie; Rosenberg, Gary; Concepcion, Gisela P; Schmidt, Eric W; Haygood, Margo G

2017-05-02

The "wooden-steps" hypothesis [Distel DL, et al. (2000) Nature 403:725-726] proposed that large chemosynthetic mussels found at deep-sea hydrothermal vents descend from much smaller species associated with sunken wood and other organic deposits, and that the endosymbionts of these progenitors made use of hydrogen sulfide from biogenic sources (e.g., decaying wood) rather than from vent fluids. Here, we show that wood has served not only as a stepping stone between habitats but also as a bridge between heterotrophic and chemoautotrophic symbiosis for the giant mud-boring bivalve Kuphus polythalamia This rare and enigmatic species, which achieves the greatest length of any extant bivalve, is the only described member of the wood-boring bivalve family Teredinidae (shipworms) that burrows in marine sediments rather than wood. We show that K. polythalamia harbors sulfur-oxidizing chemoautotrophic (thioautotrophic) bacteria instead of the cellulolytic symbionts that allow other shipworm species to consume wood as food. The characteristics of its symbionts, its phylogenetic position within Teredinidae, the reduction of its digestive system by comparison with other family members, and the loss of morphological features associated with wood digestion indicate that K. polythalamia is a chemoautotrophic bivalve descended from wood-feeding (xylotrophic) ancestors. This is an example in which a chemoautotrophic endosymbiosis arose by displacement of an ancestral heterotrophic symbiosis and a report of pure culture of a thioautotrophic endosymbiont.

Studying cell biology in the skin.

Science.gov (United States)

Morrow, Angel; Lechler, Terry

2015-11-15

Advances in cell biology have often been driven by studies in diverse organisms and cell types. Although there are technical reasons for why different cell types are used, there are also important physiological reasons. For example, ultrastructural studies of vesicle transport were aided by the use of professional secretory cell types. The use of tissues/primary cells has the advantage not only of using cells that are adapted to the use of certain cell biological machinery, but also of highlighting the physiological roles of this machinery. Here we discuss advantages of the skin as a model system. We discuss both advances in cell biology that used the skin as a driving force and future prospects for use of the skin to understand basic cell biology. A unique combination of characteristics and tools makes the skin a useful in vivo model system for many cell biologists. © 2015 Morrow and Lechler. This article is distributed by The American Society for Cell Biology under license from the author(s). Two months after publication it is available to the public under an Attribution–Noncommercial–Share Alike 3.0 Unported Creative Commons License (http://creativecommons.org/licenses/by-nc-sa/3.0).

Borniopsis mortoni sp. n. (Heterodonta, Galeommatoidea, Galeommatidae sensu lato, a new bivalve commensal with a synaptid sea cucumber from Japan

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Ryutaro Goto

2016-09-01

Full Text Available The Galeommatoidea is a bivalve superfamily that exhibits high species diversity in shallow waters. Many members of this superfamily are associated commensally with burrowing marine invertebrates in benthic sediments. The genus Borniopsis is known only from eastern Asia and exhibits high host diversity (e.g., mantis shrimps, crabs, holothurians, sipunculans and echiurans. A new species, Borniopsis mortoni sp. n., is described from mud flats at the mouth of the Souzu River, southwestern Shikoku Island, Japan. This species has elongate-ovate shells covered by a tan to dark brown periostracum, and lives attached by both its foot and byssal threads to the body surface of the synaptid sea cucumber Patinapta ooplax. Several individuals of B. mortoni are often found on the same host, but sometimes more than 10 individuals can occur together. Borniopsis mortoni is one of the smallest species in this genus. Probably, its small body size is an adaptation to the mode of life in a narrow host burrow. Until now, only two other Borniopsis species were known to have commensal associations with synaptids. Thus, this is the third example of a synaptid-associated species from this genus. In addition, we briefly review the galeommatoideans commensal with apodid sea cucumbers.

Environmental influences on the composition and structure of the freshwater mussels in shallow lakes in the Cuiabá River floodplain

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AC. Colle

Full Text Available The maintenance of the freshwater mussels' community in lakes is determined by abiotic factors at the local scale and at regional scale by interspecific relations between the larvae of bivalves and fish host. Whereas the distribution pattern at local scale, our goal was to understand the abundance and community composition of bivalves and relate the environmental agents structuring this community. We sampled 20 lakes in the floodplain of the Cuiabá River using a standardized method of sampling. To evaluate the effect of environment on the community we applied multivariate inferential analyses. We found 1.143 individuals alive belonging into six species distributed at the family Hyriidae, Mycetopodidae, Sphaeridae and Corbiculidae. The results showed that in the Pantanal the bivalve assemblage structure is influenced locally by organic matter and particle size, variables that reflect the intense interactions between water-sediment. However it is important to emphasize that these environmental characteristics are the result of the dynamics of this system which is dependent on the flood pulse, a regional factor.

Predicting the biological condition of streams: Use of geospatial indicators of natural and anthropogenic characteristics of watersheds

Science.gov (United States)

Carlisle, D.M.; Falcone, J.; Meador, M.R.

2009-01-01

We developed and evaluated empirical models to predict biological condition of wadeable streams in a large portion of the eastern USA, with the ultimate goal of prediction for unsampled basins. Previous work had classified (i.e., altered vs. unaltered) the biological condition of 920 streams based on a biological assessment of macroinvertebrate assemblages. Predictor variables were limited to widely available geospatial data, which included land cover, topography, climate, soils, societal infrastructure, and potential hydrologic modification. We compared the accuracy of predictions of biological condition class based on models with continuous and binary responses. We also evaluated the relative importance of specific groups and individual predictor variables, as well as the relationships between the most important predictors and biological condition. Prediction accuracy and the relative importance of predictor variables were different for two subregions for which models were created. Predictive accuracy in the highlands region improved by including predictors that represented both natural and human activities. Riparian land cover and road-stream intersections were the most important predictors. In contrast, predictive accuracy in the lowlands region was best for models limited to predictors representing natural factors, including basin topography and soil properties. Partial dependence plots revealed complex and nonlinear relationships between specific predictors and the probability of biological alteration. We demonstrate a potential application of the model by predicting biological condition in 552 unsampled basins across an ecoregion in southeastern Wisconsin (USA). Estimates of the likelihood of biological condition of unsampled streams could be a valuable tool for screening large numbers of basins to focus targeted monitoring of potentially unaltered or altered stream segments. ?? Springer Science+Business Media B.V. 2008.

SNP detection from de novo transcriptome sequencing in the bivalve Macoma balthica: marker development for evolutionary studies.

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Eric Pante

Full Text Available Hybrid zones are noteworthy systems for the study of environmental adaptation to fast-changing environments, as they constitute reservoirs of polymorphism and are key to the maintenance of biodiversity. They can move in relation to climate fluctuations, as temperature can affect both selection and migration, or remain trapped by environmental and physical barriers. There is therefore a very strong incentive to study the dynamics of hybrid zones subjected to climate variations. The infaunal bivalve Macoma balthica emerges as a noteworthy model species, as divergent lineages hybridize, and its native NE Atlantic range is currently contracting to the North. To investigate the dynamics and functioning of hybrid zones in M. balthica, we developed new molecular markers by sequencing the collective transcriptome of 30 individuals. Ten individuals were pooled for each of the three populations sampled at the margins of two hybrid zones. A single 454 run generated 277 Mb from which 17K SNPs were detected. SNP density averaged 1 polymorphic site every 14 to 19 bases, for mitochondrial and nuclear loci, respectively. An [Formula: see text] scan detected high genetic divergence among several hundred SNPs, some of them involved in energetic metabolism, cellular respiration and physiological stress. The high population differentiation, recorded for nuclear-encoded ATP synthase and NADH dehydrogenase as well as most mitochondrial loci, suggests cytonuclear genetic incompatibilities. Results from this study will help pave the way to a high-resolution study of hybrid zone dynamics in M. balthica, and the relative importance of endogenous and exogenous barriers to gene flow in this system.

A complete Holocene record of trematode-bivalve infection and implications for the response of parasitism to climate change.

Science.gov (United States)

Huntley, John Warren; Fürsich, Franz T; Alberti, Matthias; Hethke, Manja; Liu, Chunlian

2014-12-23

Increasing global temperature and sea-level rise have led to concern about expansions in the distribution and prevalence of complex-lifecycle parasites (CLPs). Indeed, numerous environmental variables can influence the infectivity and reproductive output of many pathogens. Digenean trematodes are CLPs with intermediate invertebrate and definitive vertebrate hosts. Global warming and sea level rise may affect these hosts to varying degrees, and the effect of increasing temperature on parasite prevalence has proven to be nonlinear and difficult to predict. Projecting the response of parasites to anthropogenic climate change is vital for human health, and a longer term perspective (10(4) y) offered by the subfossil record is necessary to complement the experimental and historical approaches of shorter temporal duration (10(-1) to 10(3) y). We demonstrate, using a high-resolution 9,600-y record of trematode parasite traces in bivalve hosts from the Holocene Pearl River Delta, that prevalence was significantly higher during the earliest stages of sea level rise, significantly lower during the maximum transgression, and statistically indistinguishable in the other stages of sea-level rise and delta progradation. This stratigraphic paleobiological pattern represents the only long-term high-resolution record of pathogen response to global change, is consistent with fossil and recent data from other marine basins, and is instructive regarding the future of disease. We predict an increase in trematode prevalence concurrent with anthropogenic warming and marine transgression, with negative implications for estuarine macrobenthos, marine fisheries, and human health.

[Feeding habits of sphoeroides testudineus (Perciformes: Tetraodontidae) in the lagoon system of Ria Lagartos, Yucatán, Mexico].

Science.gov (United States)

Chi-Espínola, Ariel Adriano; Vega-Cendejas, Maria Eugenia

2013-06-01

Sphoeroides testudineus is a dominant species in the coastal systems of Yucatán. Because of its wide distribution, occurrence and abundance performs an important functional role in coastal ecosystems. We assessed the trophic preferences and trophic-level variation in space and time for this species in Ria Lagartos lagoon, an hyperhaline ecosystem located Northwest of Yucatan Peninsula. The specimens were collected bimonthly during two annual periods (2004-2005 and 2007-2008) in 23 sites distributed along the system into four zones (marine, channel, Coloradas West and Coloradas East). Spatial and seasonal trophic variations were evaluated using canonical correspondence analysis (ACC). In a total of 382 individuals, 68 food resources included in 20 trophic groups were obtained. Higher relative importance index values (IIR) were obtained for bivalves, gastropods and macrophytes. Seasonal trophic variation showed that bivalves and gastropods were consumed along the year, while macrophytes were a preferential food during rains and windy seasons. Spatial variation indicates lower gastropods consumption at the inner zone of the system, and the opposite ocurred with bivalves. The consumption ofmacrophytes may be due to their greater abundance during rains and in the channel zone. The ACC showed that spatial trophic variation was due because of the abundance of the preferential preys (bivalves, gastropods), while seasonal differences by the secondary (amphipods, eggs, nematodes, brachyuran, detritus, nematodes). The results contribute to the biological knowledge of the species and highlight the importance and trophic function of S testudineus for the energy transfer from the benthos to higher trophic levels of the food chain.

Molluscs for Sale: Assessment of Freshwater Gastropods and Bivalves in the Ornamental Pet Trade.

Science.gov (United States)

Ng, Ting Hui; Tan, Siong Kiat; Wong, Wing Hing; Meier, Rudolf; Chan, Sow-Yan; Tan, Heok Hui; Yeo, Darren C J

2016-01-01

The ornamental pet trade is often considered a key culprit for conservation problems such as the introduction of invasive species (including infectious diseases) and overharvesting of rare species. Here, we present the first assessment of the biodiversity of freshwater molluscs in the ornamental pet trade in Singapore, one of the most important global hubs of the ornamental aquarium trade, and discuss associated conservation concerns. We recorded freshwater molluscs from ornamental pet shops and major exporters including non-ornamental species (e.g., hitchhikers, molluscs sold as fish feed). We recorded an unexpectedly high diversity-59 species-of freshwater bivalves and gastropods, with the majority (38 species or 64%) being from the Oriental region. In addition to morphological examination, we sequenced the DNA barcode region of mitochondrial CO1 and 16S genes to provide molecular data for the confirmation of the identification and for future re-identification. DNA barcodes were obtained for 50 species, and all but four were separated by > 3% uncorrected pairwise distances. The trade has been considered a main introduction pathway for non-native species to Singapore, and we found that out of 15 species in the trade as well as in the wild in Singapore, 12 are either introduced or of unknown origin, representing almost half of the known non-native freshwater molluscs in Singapore. Particularly prevalent are non-ornamental species: six hitchhikers on aquarium plants and six species sold as fish feed. We found that a quarter of the trade species have a history of introduction, which includes 11 known or potentially invasive species. We conclude that potential overharvesting is difficult to assess because only half of the trade species have been treated by IUCN. Of these, 21 species are of Least Concern and three are Data Deficient. Our checklist, with accompanying DNA barcodes, images, and museum vouchers, provides an important reference library for future monitoring

[Injury rate and incidence of accidents with biological risk among infirmary students].

Science.gov (United States)

Rodríguez Martín, A; Novalbos Ruiz, J P; Costa Alonso, M J; Zafra Mezcua, J A

2000-09-09

A study of the incidence and characteristics of biological accidents among infirmary students during their practicals at the hospital. A retrospective study carried out at five centres by means of two questionnaires, one on the duration of the training and the rate of accidents and the other on the characteristics, precautions and ports exposure behaviour. Out of 397 students, 70,5% had accidents at a rate of 64% (CI 95%, 59-68). Of these, 15% were accidents with biological risk, the majority being jabs (39%) and splashes (32,5%). It is worth note that 49,2% occurred while putting away the material and 58% in the absence of any individual protective measures. One out of 8 accidents implied a biological risk. A very high rate of accidents was observed with important deficiencies in security.

Biological Characteristics and Control of Orobanche Crenata Forsk., a Review

Directory of Open Access Journals (Sweden)

Alessia Restuccia

2009-03-01

Full Text Available Orobanche crenata is a holoparasitic phanerogam which is particularly noxious to legumes, such as faba bean (Vicia faba L., pea (Pisum sativum L., chickpea (Cicer arietinum L., lentil (Lens culinaris Medik., etc., and commonly considered one of the major causes which has contributed to re-rizing the area designed to their cultivation. After a few brief references on the origin and diffusion of O. crenata, in this work summarises the results of research into biological aspects and control of this species. The information obtained especially concerns seed production, seed viability, seed longevity and dormancy, seed conditioning and germination, parasitism phases, the effects of parasite attacks on host plants and the means of control.

Biological Characteristics and Control of Orobanche Crenata Forsk., a Review

Directory of Open Access Journals (Sweden)

Giuseppe Restuccia

2011-02-01

Full Text Available Orobanche crenata is a holoparasitic phanerogam which is particularly noxious to legumes, such as faba bean (Vicia faba L., pea (Pisum sativum L., chickpea (Cicer arietinum L., lentil (Lens culinaris Medik., etc., and commonly considered one of the major causes which has contributed to re-rizing the area designed to their cultivation. After a few brief references on the origin and diffusion of O. crenata, in this work summarises the results of research into biological aspects and control of this species. The information obtained especially concerns seed production, seed viability, seed longevity and dormancy, seed conditioning and germination, parasitism phases, the effects of parasite attacks on host plants and the means of control.

Information technology developments within the national biological information infrastructure

Science.gov (United States)

Cotter, G.; Frame, M.T.

2000-01-01

Looking out an office window or exploring a community park, one can easily see the tremendous challenges that biological information presents the computer science community. Biological information varies in format and content depending whether or not it is information pertaining to a particular species (i.e. Brown Tree Snake), or a specific ecosystem, which often includes multiple species, land use characteristics, and geospatially referenced information. The complexity and uniqueness of each individual species or ecosystem do not easily lend themselves to today's computer science tools and applications. To address the challenges that the biological enterprise presents the National Biological Information Infrastructure (NBII) (http://www.nbii.gov) was established in 1993. The NBII is designed to address these issues on a National scale within the United States, and through international partnerships abroad. This paper discusses current computer science efforts within the National Biological Information Infrastructure Program and future computer science research endeavors that are needed to address the ever-growing issues related to our Nation's biological concerns.

Biological effects of proton radiation: an update

International Nuclear Information System (INIS)

Girdhani, S.; Hlatky, L.; Sachs, R.

2015-01-01

Proton radiation provides significant dosimetric advantages when compared with gamma radiation due to its superior energy deposition characteristics. Although the physical aspects of proton radiobiology are well understood, biological and clinical endpoints are understudied. The current practice to assume the relative biological effectiveness of low linear energy transfer (LET) protons to be a generic value of about 1.1 relative to photons likely obscures important unrecognised differentials in biological response between these radiation qualities. A deeper understanding of the biological properties induced by proton radiation would have both radiobiological and clinical impact. This article briefly points to some of the literature pertinent to the effects of protons on tissue-level processes that modify disease progression, such as angiogenesis, cell invasion and cancer metastasis. Recent findings hint that proton radiation may, in addition to offering improved radio-therapeutic targeting, be a means to provide a new dimension for increasing therapeutic benefits for patients by manipulating these tissue-level processes. (authors)

Policy implications of select student characteristics and their influence on the Florida biology end-of-course assessment

Science.gov (United States)

Bertolotti, Janine Cecelia

In an attempt to improve student achievement in science in Florida, the Florida Department of Education implemented end-of-course (EOC) assessments in biology during the 2011-2012 academic school year. Although this first administration would only account for 30% of the student's overall final course grade in biology, subsequent administrations would be accompanied by increasing stakes for students, teachers, and schools. Therefore, this study sought to address gaps in empirical evidence as well as discuss how educational policy will potentially impact on teacher evaluation and professional development, student retention and graduation rates, and school accountability indicators. This study explored four variables- reading proficiency, ethnicity, socioeconomic status, and gender- to determine their influence and relationship on biology achievement on the Biology I EOC assessment at a Title 1 school. To do so, the results of the Biology I EOC assessment administered during the Spring 2012 school year was obtained from a small, rural Title 1 high school in North Florida. Additional data regarding each student's qualification for free and reduced-price lunch, FCAT Reading developmental scale scores, FCAT Reading level, grade level, gender, and ethnicity were also collected for the causal-comparative exploratory study. Of the 178 students represented, 48% qualified for free and reduced-price lunch, 54% were female, and 55% scored at FCAT Reading level 3 or higher. Additionally, 59% were White and 37% Black. A combination of descriptive statistics and other statistical procedures such as independent samples one-tailed t-test, one-way ANOVAs, ANCOVAs, multipleregression, and a Pearson r correlation was utilized in the analysis, with a significance level set at 0.05. Results indicate that of all four variables, FCAT Reading proficiency was the sole variable, after adjusting for other variables; that had a significant impact on biology achievement. Students with higher

Ecological interactions on macroevolutionary time scales: clams and brachiopods are more than ships that pass in the night.

Science.gov (United States)

Liow, Lee Hsiang; Reitan, Trond; Harnik, Paul G

2015-10-01

Competition among organisms has ecological and evolutionary consequences. However, whether the consequences of competition are manifested and measureable on macroevolutionary time scales is equivocal. Marine bivalves and brachiopods have overlapping niches such that competition for food and space may occur. Moreover, there is a long-standing debate over whether bivalves outcompeted brachiopods evolutionarily, because brachiopod diversity declined through time while bivalve diversity increased. To answer this question, we estimate the origination and extinction dynamics of fossil marine bivalve and brachiopod genera from the Ordovician through to the Recent while simultaneously accounting for incomplete sampling. Then, using stochastic differential equations, we assess statistical relationships among diversification and sampling dynamics of brachiopods and bivalves and five paleoenvironmental proxies. None of these potential environmental drivers had any detectable influence on brachiopod or bivalve diversification. In contrast, elevated bivalve extinction rates causally increased brachiopod origination rates, suggesting that bivalves have suppressed brachiopod evolution. © 2015 The Authors. Ecology Letters published by CNRS and John Wiley & Sons Ltd.

The Whole-Genome and Transcriptome of the Manila Clam (Ruditapes philippinarum).

Science.gov (United States)

Mun, Seyoung; Kim, Yun-Ji; Markkandan, Kesavan; Shin, Wonseok; Oh, Sumin; Woo, Jiyoung; Yoo, Jongsu; An, Hyesuck; Han, Kyudong

2017-06-01

The manila clam, Ruditapes philippinarum, is an important bivalve species in worldwide aquaculture including Korea. The aquaculture production of R. philippinarum is under threat from diverse environmental factors including viruses, microorganisms, parasites, and water conditions with subsequently declining production. In spite of its importance as a marine resource, the reference genome of R. philippinarum for comprehensive genetic studies is largely unexplored. Here, we report the de novo whole-genome and transcriptome assembly of R. philippinarum across three different tissues (foot, gill, and adductor muscle), and provide the basic data for advanced studies in selective breeding and disease control in order to obtain successful aquaculture systems. An approximately 2.56 Gb high quality whole-genome was assembled with various library construction methods. A total of 108,034 protein coding gene models were predicted and repetitive elements including simple sequence repeats and noncoding RNAs were identified to further understanding of the genetic background of R. philippinarum for genomics-assisted breeding. Comparative analysis with the bivalve marine invertebrates uncover that the gene family related to complement C1q was enriched. Furthermore, we performed transcriptome analysis with three different tissues in order to support genome annotation and then identified 41,275 transcripts which were annotated. The R. philippinarum genome resource will markedly advance a wide range of potential genetic studies, a reference genome for comparative analysis of bivalve species and unraveling mechanisms of biological processes in molluscs. We believe that the R. philippinarum genome will serve as an initial platform for breeding better-quality clams using a genomic approach. © The Author 2017. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution.

Interspecific variability of endocrine disruption and oxidative stress in two bivalve species from the Ria Formosa Lagoon (south coast of Portugal

Directory of Open Access Journals (Sweden)

Catarina Pereira

2013-01-01

Full Text Available Estuaries are highly productive ecosystems that have been increasingly affected by anthropogenic activities. In this study, the presence of endocrine disrupting compounds (EDCs and their relation to oxidative stress were assessed in two bivalve species (mussels Mytilus galloprovincialis and clams Ruditapes decussatus from the Ria Formosa Lagoon (south Portugal. We applied the alkali-labile phosphate (ALP assay to determine vitellogenin-like protein levels, and the lipid peroxidation (LPO method to assess oxidative damage. Mussels and clams exhibited the same pattern of ALP concentrations, with no differences between genders and higher levels in winter. R. decussatus showed higher ALP values than M. galloprovincialis, possibly associated with a stronger responsiveness of clams to EDCs or due to the influence of the reproductive cycle. Mussels exhibited a more evident seasonal effect for LPO, indicating that these organisms are more influenced by seasonal fluctuations in the water column compared to the sediment-associated clams. Both species appear to be under the influence of EDC exposure (which could induce Vg-like protein synthesis and oxidative stressors (leading to lipid peroxidation in the Ria Formosa Lagoon, particularly in winter, reflecting the presence of different contaminants in Ria Formosa and environmental changes, as well as complex interactions between them.

Creating biological nanomaterials using synthetic biology

International Nuclear Information System (INIS)

Rice, MaryJoe K; Ruder, Warren C

2014-01-01

Synthetic biology is a new discipline that combines science and engineering approaches to precisely control biological networks. These signaling networks are especially important in fields such as biomedicine and biochemical engineering. Additionally, biological networks can also be critical to the production of naturally occurring biological nanomaterials, and as a result, synthetic biology holds tremendous potential in creating new materials. This review introduces the field of synthetic biology, discusses how biological systems naturally produce materials, and then presents examples and strategies for incorporating synthetic biology approaches in the development of new materials. In particular, strategies for using synthetic biology to produce both organic and inorganic nanomaterials are discussed. Ultimately, synthetic biology holds the potential to dramatically impact biological materials science with significant potential applications in medical systems. (review)

Creating biological nanomaterials using synthetic biology.

Science.gov (United States)

Rice, MaryJoe K; Ruder, Warren C

2014-02-01

Synthetic biology is a new discipline that combines science and engineering approaches to precisely control biological networks. These signaling networks are especially important in fields such as biomedicine and biochemical engineering. Additionally, biological networks can also be critical to the production of naturally occurring biological nanomaterials, and as a result, synthetic biology holds tremendous potential in creating new materials. This review introduces the field of synthetic biology, discusses how biological systems naturally produce materials, and then presents examples and strategies for incorporating synthetic biology approaches in the development of new materials. In particular, strategies for using synthetic biology to produce both organic and inorganic nanomaterials are discussed. Ultimately, synthetic biology holds the potential to dramatically impact biological materials science with significant potential applications in medical systems.

Temporal variability of the bivalve Erodona mactroides BOSC, 1802 during and after the El Niño phenomenon (2002/2003 in a subtropical lagoon, southern Brazil Variabilidade temporal do bivalve Erodona mactroides BOSC, 1802 durante e após o fenômeno El Niño (2002/2003 em uma laguna subtropical, sul do Brasil

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Leonir André Colling

2010-12-01

Full Text Available AIM: The aim of this work was to study the relationships between temporal variability of Erodona mactroides and abiotic parameters of the water column and the substrate in a shallow embayment of the Patos Lagoon estuarine region in southern Brazil; METHODS: Samples were taken with a PVC corer (10 cm diameter buried 10 cm into the sediment between October 2002 and December 2004. Each month 18 biologic samples were taken, six substrate samples were analyzed for sediment grain size and organic matter content and sediment deposition rates were determined by 12 sediment traps every two weeks. Salinity, water temperature, water level and estuarine freshwater discharge were measured daily. Abiotic parameters and bivalve densities were tested among months with registered mortality events by ANOVA (One-way, p = 0.05, being the E. mactroides seasonal variability tested by Kruskal-Wallis (p = 0.05. Regression analyses among abiotic parameters and Spearman's "R" correlation analyses between biological and environmental data were both performed; RESULTS: Two periods were identified with distinct features: one at the beginning of the study when observed limnetic conditions in the estuarine region were caused by the ENSO - El Niño 2002/2003 phenomenon when an absence of E. mactroides was registered as well as a higher percentages of fine sediments and lower percentages of organic matter. The second period was characterized by a decreasing influence of the El Niño and predominance of mixohaline conditions, recruitments and increasing densities of E. mactroides with a successive decrease of mean densities due to three mortality events, lower percentages of fine sediments and higher percentages of organic matter; CONCLUSIONS: The present study provides evidences that the occurrence of E. mactroides in the southern estuarine region depends on the water flow regime from the drainage basin, which characterizes species recruitment as temporally unpredictable and

Synthetic Approaches and Biological Activities of 4-Hydroxycoumarin Derivatives

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Oee-Sook Park

2009-11-01

Full Text Available The main purpose of this review is to summarize recent chemical syntheses and structural modifications of 4-hydroxycoumarin and its derivatives, of interest due to their characteristic conjugated molecular architecture and biological activities.

Characteristics of leachate in Foot and Mouth Disease Carcass Disposal using Molecular Biology Method

Science.gov (United States)

Choi, E. J.; Kim, B. J.; Wi, D. W.; Choi, N. C.; Lee, S. J.; Min, J. E.; Park, C. Y.

2012-04-01

The Leachate from Foot and Mouth Disease(FMD) carcass disposal by is one of the types of high-concentration contaminated wastewater with the greatest environmental impact. This is due to its pollutants: nitrate nitrogen (NO3--N) and pathogenic microorganisms. Satisfactory treatment of leachate is not an easy task for its high concentrations of nitrate nitrogen and pathogenic microorganisms. Therefore suitable FMD leachate treatment processes should be adopted to improve treatment performance and to reduce overall running costs. The objective of this study was to determine the leachate characteristics through environmental analysis and molecular biology method (bacteria identification and Polymerase Chain Reaction) using FMD leachate samples for optimal FMD leachate treatment processes. The Sixteen FMD leachate samples was obtained from carcass disposal regions in Korea. Results of environmental analysis showed that pH and Eh was observed from 5.57 to 7.40, -134~358mV. This data was exhibited typical early carcass disposal (Neutral pH and Reducing Environment by abundant organic matter). TOC and nitrate nitrogen high concentrations in FMD leachate showed a large variability from 2.3 to 38,730 mg/L(mean - 6,821.93mg/L) and 0.335 ~231.998mg/L(mean - 37.46mg/L), respectively. The result of bacteria identification was observed Bacillus cereus, Pseudomonas putida, Acinetobacter ursingii, Aeromonas hydrophila, Serratia liquefaciens, Brevundimonas naejangsanensis, Serratia liquefaciens, Pseudomonas fluorescens, Pseudomonas aeruginosa, Acinetobacter ursingii. The results of Polymerase Chain Reaction(PCR) using EzTaxon server data revealed Pseudoclavibacter helvolus, Pseudochrobactrum saccharolyticum, Corynebacterium callunae, Paenibacillus lautus, Paenibacillus sp., Bacillus arvi, Brevundimonas bullata, Acinetobacter ursingii, Lysinibacillus sphaericus, Bacillus pumilus, Bacillus sphaericus, Bacillus psychrodurans, Pseudomonas sp.

Imidazole: Having Versatile Biological Activities

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Amita Verma

2013-01-01

Full Text Available Imidazoles have occupied a unique position in heterocyclic chemistry, and its derivatives have attracted considerable interests in recent years for their versatile properties in chemistry and pharmacology. Imidazole is nitrogen-containing heterocyclic ring which possesses biological and pharmaceutical importance. Thus, imidazole compounds have been an interesting source for researchers for more than a century. The imidazole ring is a constituent of several important natural products, including purine, histamine, histidine, and nucleic acid. Being a polar and ionisable aromatic compound, it improves pharmacokinetic characteristics of lead molecules and thus is used as a remedy to optimize solubility and bioavailability parameters of proposed poorly soluble lead molecules. There are several methods used for the synthesis of imidazole-containing compounds, and also their various structure reactions offer enormous scope in the field of medicinal chemistry. The imidazole derivatives possess extensive spectrum of biological activities such as antibacterial, anticancer, antitubercular, antifungal, analgesic, and anti-HIV activities. This paper aims to review the biological activities of imidazole during the past years.

System biology and the project Encode

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M. Yu. Obolenskaya

2014-08-01

Full Text Available The goal of this review is to give an incipient knowledge on the background of system biology, the premises to its assignment as a new branch of biology, its principles, methodology and its great achievements in identification of functional elements of human genome and regulation of their concordant­ and differential activity. The short characteristics of functional elements including the protein-coding sequences and those coding noncoding RNAs, the DNAse 1 hypersensitivity sites and methylated CpG islets, modified histones and specific 3D structure of chromatin, are represented. The topology of transcription factors network with its main motifs, hierar­chy, combination and association of transcription factors and their allelic specificity are highlighted­.

5. Conference cycle. The radiations and the Biological Sciences

International Nuclear Information System (INIS)

Balcazar G, M.; Chavez B, A.

1991-06-01

Nuclear technologies and their development have influenced many aspects of modern life. Besides used for electricity production nuclear technologies are applied in many other fields, especially in biological sciences. In genetics and molecular biology they enable research resulting in increased food production and better food preservation. Usage in material sciences lead to new varieties of plastics or improved characteristics. Nuclear applications are used in pe troleum industries and in forecasting geothermic power. Radiobiology and radiotherapy enable diagnosis and therapy of several diseases, e.g. cancer. Nuclear technologies also contribute to preserve the environment. They offer methods to analyse as well as decrease the environmental impacts. The 5. conference cyle entitled 'The Radiations and the Biological Sciences' aims to inform students of biological sciences about new nuclear technologies applied in their field of interest

[Changes in active cysteine cathepsins in lysosomes from tissues thyroid papillary carcinomas with various biological characteristics].

Science.gov (United States)

Kalinichenko, O V; Myshunina, T M; Tron'ko, M D

2013-01-01

To clarify possible role of cysteine cathepsin H, B and L in the proteolytic processes that contribute to the progression of tumor growth in the thyroid, we studied their activity in lysosomes isolated from the tissue of papillary carcinomas. It was shown that for these enzymes there is a dependence of the changes in their activity on a number of biological characteristics of the tumors. Thus, the sharp increase in the activity ofcathepsin H observed in lysosomes of tissue carcinomas category T2 and T3, with intra-and ekstrathyroid and lymphatic invasion of tumor cells. An increase in the activity of cathepsin B is set in the lysosomes of tissue heterogeneous follicular structure, especially in the presence of solid areas, in comparison with typical papillary tumors and in the lysosomes of tissue carcinomas in intrathyroid and cathepsin L-at extrathyroid invasion. A common feature of the enzymes is to increase the activity of cathepsins in lysosomes of tissue nonencapsulated papillary carcinomas. These enzymes probably do not take part in the invasion of tumor cells into blood vessels and in the mechanisms of tumor metastasis to regional lymph nodes. The latter shows no changes in the activity of cathepsins in lysosomes of tissue carcinomas category N1. The results indicate the different role of cathepsin H, B and L in thyroid carcinogenesis, where each enzyme has its specific function.

驯鹿及其生物学特性研究%Reindeer and Its Biological Characteristics

Institute of Scientific and Technical Information of China (English)

常悦; 张玉; 陈巴特尔; 孙亚红

2013-01-01

驯鹿分布于北极圈及其周边地区,耐寒怕燥,处于野生或半驯化状态.本文通过对驯鹿的生态分布,形态特征(包括个体大小、被毛、茸角、鼻、蹄、视力),进食习性,繁殖习性,迁徙活动以及天敌等几方面对驯鹿的生物学特性做出较为全面的介绍,以便为今后的驯鹿保护工作奠定基础,从而制定出针对性更强的保护措施.%The reindeer inhabits in the Arctic Circle and its surrounding areas, which is cold resistant and afraid of dryness and in the wild or semi-domesticated state. The paper comprehensively introduced the biological characteristics of the reindeer through such aspects as its ecological distribution, morphological character (including body size, fur, antler, nose, feet and eyesight), eating habit, breeding habit, migrating activities as well as its natural enemies, so as to lay a foundation for the protection work and therefore developing more effective protective measures.

Hábitos de Vida da Associação “Schuchertella”agassizi – Pthychopteria eschwegei, Formação Maecuru,Devoniano, Bacia do Amazonas, Brasil.

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Luiza Corral Martins de Oliveira Ponciano

2007-07-01

Full Text Available The fossils studied came from outcrops of the Maecuru and Curuá rivers, State of Pará, belonging to the upper strata of theMaecuru Formation, Eifelian age. In this formation, two associations of marine benthic invertebrate can be identified, each inferring adistinct paleoenvironment. The association analyzed occurs in medium and coarse sandstones and shows “Schuchertella” agassizi andPtychopeteria eschwegei as predominant organisms. It was idnetified 12 species of brachiopods, 20 species of bivalves, 12 of trilobites,8 of gastropods, 6 of bellerophonts, 3 of crinoids and 3 of tentaculitids in this association. Brachiopods are the most abundant organisms,responsible for approximately 50% of it, followed by tentaculitids and bivalves. Trilobites, gastropods and bellerophonts sum less than10% of the aforementioned association. Crinoids were not included in the quantitative analysis because they are only found as calicinalplates and disarticulated column disks. The brachiopods showed, through their morphofunctional characteristics, suspension feedersrecumbent (free-lying epifaunal life habit or a pedicle attached mode of life. The bivalves showed a predominant suspension feeder semiinfaunalhabit, attached by byssus threads to the substratum, and an infaunal mode of life. All the trilobites showed a predator/scavengerand vagile epifaunal habit. The epifaunal platyceratids represents the gastropods with low mobility (coprophagous/suspension feeders.The bellerophonts showed an epifaunal highly/medium mobility and grazing/predator habit. The tentaculitids having a semi-infaunal,suspension feeder habit. The suspension feeder forms (brachiopods, bivalves and tentaculitids account for over 90% of the organisms, withthe remaining percentage distributed among the predator/scavenger (trilobites, coprophagous/suspension feeders (gastropods, grazers/predators (bellerophonts and deposit feeders (rare bivalves. The predominance of suspension feeder forms

Determination of the toxic variability of lipophilic biotoxins in marine bivalve and gastropod tissues treated with an industrial canning process.

Science.gov (United States)

García, Carlos; Oyaneder-Terrazas, Javiera; Contreras, Cristóbal; Del Campo, Miguel; Torres, Rafael; Contreras, Héctor R

2016-11-01

Contamination of shellfish with lipophilic marine biotoxins (LMB), pectenotoxins (PTXs), yessotoxins (YTXs) and okadaic acid (OA) toxin groups in southern Chile is a constant challenge for the development of miticulture considering the high incidence of toxic episodes that tend to occur. This research is focused on using methodologies for assessing the decrease in toxins of natural resources in Chile with high value, without altering the organoleptic properties of the shellfish. The species were processed through steaming (1 min at 121°C) and subsequent canning (5 min at 121°C). Changes in the profiles of toxins and total toxicity levels of LMB in endemic bivalves and gastropods were determined using liquid chromatography-tandem mass spectrometry (LC-MS/MS). The total reduction of toxicity (≈ 15%) was not related to the destruction of the toxin, but rather to the loss of LMB on removing the shells and packing media of canned products (***p < 0.001). Industrial processing of shellfish reduces LMB contents by up to 15% of the total initial contents, concomitant only with the interconversion of PTX-group toxins into PTX-2sa. In soft bottom-dwelling species with toxicities beyond the standard for safe human consumption (≥ 160 μg OA-eq kg - 1 ), toxicity can be reduced to safe levels through industrial preparation procedures.

Teredo navalis in the Baltic Sea: Larval Dynamics of an Invasive Wood-Boring Bivalve at the Edge of Its Distribution

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Heike Lippert

2017-10-01

Full Text Available Wooden groin systems on the southwestern Baltic Sea coast are a traditional and important coastal-protection facility, but have been regularly infested and destroyed by the wood-boring bivalve Teredo navalis since the early 1990s. The occurrence of T. navalis was presumed to be limited mainly by the prevailing low salinities. Recently, a possible range expansion of this invasive species to the more eastern parts of the Baltic Sea has been discussed. T. navalis larval settlement was therefore monitored at the distribution boundary of the species in the Baltic Sea over a period of 4 years. At 7 stations along the prevailing salinity gradient on the Mecklenburg-western Pomeranian coast, larval traps were installed at regular time intervals, while at the same time water temperature and salinity were measured continuously every hour. Correlations between measured abiotic parameters and borehole abundance of T. navalis were tested. For the German Baltic Sea coast, no range expansion of T. navalis was confirmed. The salinity and temperatures at the groin systems varied among the study years, and significant correlations between T. navalis borehole abundance and salinity as well as temperature were found. Higher summer temperatures favor the T. navalis borehole abundance on the Mecklenburg-western Pomeranian coast, and may slightly shift the distribution border of this species toward lower salinities.

Genotoxic and Cytotoxic Effects on the Immune Cells of the Freshwater Bivalve Dreissena polymorpha Exposed to the Environmental Neurotoxin BMAA.

Science.gov (United States)

Lepoutre, Alexandra; Milliote, Nadia; Bonnard, Marc; Palos-Ladeiro, Mélissa; Rioult, Damien; Bonnard, Isabelle; Bastien, Fanny; Faassen, Elisabeth; Geffard, Alain; Lance, Emilie

2018-03-01

The environmental neurotoxin β- N -Methylamino-l-alanine (BMAA) has been pointed out to be involved in human neurodegenerative diseases. This molecule is known to be bioaccumulated by bivalves. However, little data about its toxic effects on freshwater mussels is available, particularly on the hemolymphatic compartment and its hemocyte cells involved in various physiological processes such as immune defenses, digestion and excretion, tissue repair, and shell production. Here we exposed Dreissena polymorpha to dissolved BMAA, at the environmental concentration of 7.5 µg of /mussel/3 days, during 21 days followed by 14 days of depuration in clear water, with the objective of assessing the BMAA presence in the hemolymphatic compartment, as well as the impact of the hemocyte cells in terms of potential cytotoxicity, immunotoxicity, and genotoxiciy. Data showed that hemocytes were in contact with BMAA. The presence of BMAA in hemolymph did not induce significant effect on hemocytes phagocytosis activity. However, significant DNA damage on hemocytes occurred during the first week (days 3 and 8) of BMAA exposure, followed by an increase of hemocyte mortality after 2 weeks of exposure. Those effects might be an indirect consequence of the BMAA-induced oxidative stress in cells. However, DNA strand breaks and mortality did not persist during the entire exposure, despite the BMAA persistence in the hemolymph, suggesting potential induction of some DNA-repair mechanisms.

Genotoxic and Cytotoxic Effects on the Immune Cells of the Freshwater Bivalve Dreissena polymorpha Exposed to the Environmental Neurotoxin BMAA

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Alexandra Lepoutre

2018-03-01

Full Text Available The environmental neurotoxin β-N-Methylamino-l-alanine (BMAA has been pointed out to be involved in human neurodegenerative diseases. This molecule is known to be bioaccumulated by bivalves. However, little data about its toxic effects on freshwater mussels is available, particularly on the hemolymphatic compartment and its hemocyte cells involved in various physiological processes such as immune defenses, digestion and excretion, tissue repair, and shell production. Here we exposed Dreissena polymorpha to dissolved BMAA, at the environmental concentration of 7.5 µg of /mussel/3 days, during 21 days followed by 14 days of depuration in clear water, with the objective of assessing the BMAA presence in the hemolymphatic compartment, as well as the impact of the hemocyte cells in terms of potential cytotoxicity, immunotoxicity, and genotoxiciy. Data showed that hemocytes were in contact with BMAA. The presence of BMAA in hemolymph did not induce significant effect on hemocytes phagocytosis activity. However, significant DNA damage on hemocytes occurred during the first week (days 3 and 8 of BMAA exposure, followed by an increase of hemocyte mortality after 2 weeks of exposure. Those effects might be an indirect consequence of the BMAA-induced oxidative stress in cells. However, DNA strand breaks and mortality did not persist during the entire exposure, despite the BMAA persistence in the hemolymph, suggesting potential induction of some DNA-repair mechanisms.

Characteristics studies of molecular structures in drugs

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Wei Gao

2017-05-01

Full Text Available In theoretical medicine, topological indices are defined to test the medicine and pharmacy characteristics, such as melting point, boiling point, toxicity and other biological activities. As basic molecular structures, hexagonal jagged-rectangle and distance-regular structure are widely appeared in medicine, pharmacy and biology engineering. In this paper, we study the chemical properties of hexagonal jagged-rectangle from the mathematical point of view. Several vertex distance-based indices are determined. Furthermore, the Wiener related indices of distance-regular structure are also considered.

First report of Phoronis ovalis from Africa and its effect on mussel hosts

African Journals Online (AJOL)

Phoronis ovalis in Namibia leaves characteristic burrows in its hosts (0.2 mm diameter), primarily the native brown mussel Perna perna. In all, eight additional host species were identified, including one barnacle, four gastropods and three bivalves. The distribution of P. ovalis was strictly subtidal, where it reached 99% ...

Benthic studies in Goa estuaries. I. Standing crop and faunal composition in relation to bottom salinity distribution characteristics in the estuary of Mandovi River

Digital Repository Service at National Institute of Oceanography (India)

Parulekar, A.H.; Dwivedi, S.N.

and bivalves together contribute 70% of the macrofauna, by number and weight. Biomass production, inspite of large temporal and spatial variations, is high (54.17 g m-2) with proportionately high organic matter production of 4.08 g C m-2 y-1. Estimated annual...

Trace elements in bivalves from the Rio Cruces, Chile, trace watershed evolution after a major earthquake and challenge a postulated chemical spill from a pulp plant

Science.gov (United States)

Risk, M.; Burchell, M.; Nairn, R.; Tubrett, M.; Forsterra, G.

2009-05-01

In May, 1960, the largest recorded earthquake in the history of the planet hit southern Chile, dropping part of the course of the Rio Cruces by 2m and creating an extensive wetland. The Brazilian Waterweed Egeria densa colonised the area, and became a primary food source for large populations of the Black-necked Swan, Cygnus melancoryphus. In 2004, a large pulp mill commenced operations upstream on the river. According to local reports, immediately after the opening of the plant, the weed died and the swans left. There was public outcry, and a search for a cause or a culprit. It was postulated that some sort of chemical spill from the plant caused the weed to die, resulting in departure of the swans. In 2008, we collected specimens of the bivalve Diplodon chilensis from several locations downstream from the Plant and towards the wetland to see if there was evidence of a chemical spill recorded in the shells. We prepared thin-sections of the shells to observe growth line development and patterns. Additionally, shell samples were analysed for stable oxygen isotopes and trace elements, using LA-ICP/MS. Based on annual growth lines, some of the bivalves were long-lived, with an age of more than 50 years. These individuals settled in the river shortly after the earthquake, and have lived there continuously ever since. Annual and sub-annual banding was clear, and the annual cyclicity of the major bands was verified with oxygen isotope analysis. There are no changes in growth corresponding to 2004. Trace element scans provided a wealth of information on the evolution of this earthquake-impacted wetland. Barium, Strontium and Manganese all showed strong annual cyclicity. From the analysis of older specimens, we interpret the high peaks of the Ba signal as reflecting soil erosion-Ba peaks are large immediately after the earthquake, then they diminish through time. Sr is likely a temperature signal, and Mn reflects runoff. Minor peaks in Cu, As and Pb probably reflect

Experimental effects of immersion time and water temperature on body condition, burying depth and timing of spawning of the tellinid bivalve Macoma balthica

Science.gov (United States)

de Goeij, Petra; Honkoop, Pieter J.

2003-03-01

The burying depth of many bivalve molluscs on intertidal mudflats varies throughout the year and differs between places. Many factors are known to influence burying depth on a seasonal or spatial scale, with temperature and tidal regime probably being very important. Burying depth, body condition and gonadal development of Macoma balthica were followed throughout winter and spring in an experiment in which water temperature and immersion time were manipulated. Unexpectedly, relative water temperature, in contrast to the prediction, did not generally affect body condition or burying depth. This was probably a consequence of the exceptionally overall low water temperatures during the experimental winter. Differences in temperature did, however, result in different timing of spawning: M. balthica spawned earlier at higher spring temperatures. Longer immersion times led to higher body condition only late in spring, but led to deeper burying throughout almost the whole period. There was no effect of immersion time on the timing of spawning. We conclude that a longer immersion time leads to deeper burying, independent of body condition. We also conclude that burying behaviour of M. balthica is not determined by the moment of spawning.

Calcification in a marginal sea - influence of seawater [Ca2+] and carbonate chemistry on bivalve shell formation

Science.gov (United States)

Thomsen, Jörn; Ramesh, Kirti; Sanders, Trystan; Bleich, Markus; Melzner, Frank

2018-03-01

In estuarine coastal systems such as the Baltic Sea, mussels suffer from low salinity which limits their distribution. Anthropogenic climate change is expected to cause further desalination which will lead to local extinctions of mussels in the low saline areas. It is commonly accepted that mussel distribution is limited by osmotic stress. However, along the salinity gradient, environmental conditions for biomineralization are successively becoming more adverse as a result of reduced [Ca2+] and dissolved inorganic carbon (CT) availability. In larvae, calcification is an essential process starting during early development with formation of the prodissoconch I (PD I) shell, which is completed under optimal conditions within 2 days. Experimental manipulations of seawater [Ca2+] start to impair PD I formation in Mytilus larvae at concentrations below 3 mM, which corresponds to conditions present in the Baltic at salinities below 8 g kg-1. In addition, lowering dissolved inorganic carbon to critical concentrations (< 1 mM) similarly affected PD I size, which was well correlated with calculated ΩAragonite and [Ca2+][HCO3-] / [H+] in all treatments. Comparing results for larvae from the western Baltic with a population from the central Baltic revealed a significantly higher tolerance of PD I formation to lowered [Ca2+] and [Ca2+][HCO3-] / [H+] in the low saline adapted population. This may result from genetic adaptation to the more adverse environmental conditions prevailing in the low saline areas of the Baltic. The combined effects of lowered [Ca2+] and adverse carbonate chemistry represent major limiting factors for bivalve calcification and can thereby contribute to distribution limits of mussels in the Baltic Sea.

Laboratory and field assessment of uranium trophic transfer efficiency in the crayfish Orconectes limosus fed the bivalve C. fluminea

International Nuclear Information System (INIS)

Simon, Olivier; Garnier-Laplace, Jacqueline

2005-01-01

At present, ecotoxicological information regarding the impact of natural uranium (U) on freshwater ecosystems via the trophic contamination route is scarce. We generated an experimental trophic food chain involving the prey species, Corbicula fluminea, and a predator, Orconectes limosus, for a 10-day and a 30-day feeding periods (food ration: one whole soft body/day/crayfish). We studied the efficiency of U trophic transfer and the distribution of U in the predator. During the test, we varied the quantity of dietary U (from beforehand contaminated bivalves at concentrations ranging from 0.9 ± 0.1 to 20.2 ± 9 μg/g fw provided to each crayfish over the 10 days) applying a daily feeding rate equal to 3.9 ± 0.8% fw. The efficiency of U trophic transfer from clams to crayfish varied between 1 and 13% depending on the prey exposure modalities. Accumulation of U was observed in the digestive gland but also in gills, in the muscle, and in the molt of the crayfish after trophic exposure treatments. Under high-level exposure conditions, the digestive gland was the main target-organ, however a significant accumulation was also observed in the stomach. With regard to low levels of trophic exposure, accumulation of U in gills, in the stomach, and in the digestive gland was of the same order of magnitude. Longer exposure period which incorporated a crayfish molt, resulted in a decrease of trophic transfer ratio and a modified U tissue distribution

Complete sequences of the highly rearranged molluscan mitochondrial genomes of the scaphopod graptacme eborea and the bivalve mytilus edulis

Energy Technology Data Exchange (ETDEWEB)

Boore, Jeffrey L.; Medina, Monica; Rosenberg, Lewis A.

2004-01-31

We have determined the complete sequence of the mitochondrial genome of the scaphopod mollusk Graptacme eborea (Conrad, 1846) (14,492 nts) and completed the sequence of the mitochondrial genome of the bivalve mollusk Mytilus edulis Linnaeus, 1758 (16,740 nts). (The name Graptacme eborea is a revision of the species formerly known as Dentalium eboreum.) G. eborea mtDNA contains the 37 genes that are typically found and has the genes divided about evenly between the two strands, but M. edulis contains an extra trnM and is missing atp8, and has all genes on the same strand. Each has a highly rearranged gene order relative to each other and to all other studied mtDNAs. G. eborea mtDNA has almost no strand skew, but the coding strand of M. edulis mtDNA is very rich in G and T. This is reflected in differential codon usage patterns and even in amino acid compositions. G. eborea mtDNA has fewer non-coding nucleotides than any other mtDNA studied to date, with the largest non-coding region being only 24 nt long. Phylogenetic analysis using 2,420 aligned amino acid positions of concatenated proteins weakly supports an association of the scaphopod with gastropods to the exclusion of Bivalvia, Cephalopoda, and Polyplacophora, but is generally unable to convincingly resolve the relationships among major groups of the Lophotrochozoa, in contrast to the good resolution seen for several other major metazoan groups.

The control of an invasive bivalve, Corbicula fluminea, using gas impermeable benthic barriers in a large natural lake.

Science.gov (United States)

Wittmann, Marion E; Chandra, Sudeep; Reuter, John E; Schladow, S Geoffrey; Allen, Brant C; Webb, Katie J

2012-06-01

Anoxia can restrict species establishment in aquatic systems and the artificial promotion of these conditions can provide an effective control strategy for invasive molluscs. Low abundances (2-20 m(-2)) of the nonnative bivalve, Asian clam (Corbicula fluminea), were first recorded in Lake Tahoe, CA-NV in 2002 and by 2010 nuisance-level population densities (>10,000 m(-2)) were observed. A non-chemical control method using gas impermeable benthic barriers to reduce dissolved oxygen (DO) concentrations available to C. fluminea was tested in this ultra-oligotrophic natural lake. In 2009, the impact of ethylene propylene diene monomer (EPDM) sheets (9 m(2), n = 6) on C. fluminea beds was tested on 1-7 day intervals over a 56 day period (August-September). At an average water temperature of 18 °C, DO concentrations under these small barriers were reduced to zero after 72 h resulting in 100 % C. fluminea mortality after 28 days. In 2010, a large EPDM barrier (1,950 m(2)) was applied to C. fluminea populations for 120 days (July-November). C. fluminea abundances were reduced over 98 % after barrier removal, and remained significantly reduced (>90 %) 1 year later. Non-target benthic macroinvertebrate abundances were also reduced, with variable taxon-specific recolonization rates. High C. fluminea abundance under anoxic conditions increased the release of ammonium and soluble reactive phosphorus from the sediment substrate; but levels of unionized ammonia were low at 0.004-0.005 mg L(-1). Prolonged exposure to anoxia using benthic barriers can provide an effective short term control strategy for C. fluminea.

Prospecção de moluscos bivalves no estudo da poluição dos rios Cachoeira e Santana em Ilhéus, Bahia, Brasil

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Denise Sande

2010-06-01

Full Text Available A survey about the pollution level of the Cachoeira and Santana Rivers (Ilheus, Bahia, Brazil was performed for a quarter, through the assessment of the microbiological quality of water and seafood (Crassostrea rhizophorae - oyster and Tagelus plebeius - razor clam extracted from these rivers. Traditional indicators of pollution such as total coliforms (Ct and thermtolerant coliforms (CT, and total count of micro-organisms, with isolation and identification of Enterobacteriaceae were determined in rivers samples, which exhibited different levels of faecal pollution. An amount of 68 micro-organisms was isolated, distributed in ten species, among them, Salmonella typhi, Escherichia coli and Shigella sp., warning about the risk of consuming these shellfish in nature, even when there is accordance with the laws established for CT. The bivalve prospection to monitor pollution levels was not effective considering CT detection in oysters and moapens. There was also the highest contamination degree in the Cachoeira River, which is used for water distribution in the region and as livelihood source through extractive activities for the riverside population.

Bremsstrahlung background and quantitation of thin biological samples

International Nuclear Information System (INIS)

Khan, K.M.

1991-02-01

An inherent feature of all electron-excited X-ray spectra is the presence of a background upon which the characteristic peaks of interest are superimposed. To extract the x-ray intensity of the characteristics lines of interest, it is necessary to subtract this background, which may be due to both specimen generated Bremsstrahlung and extraneous sources, from a measured x-ray spectrum. Some conventional methods of background subtraction will be briefly reviewed. It has been seen that these conventional methods do not give sufficiently accurate results in biological analysis where the peaks of interest are not well-separated and most of the peaks lie in the region where the background is appreciably curved. An alternative approach of background subtraction for such samples is investigated which involves modelling the background using the currently available knowledge of x-ray physics and energy dispersive detectors. This method is particularly suitable for biological samples as well as other samples having an organic matrix. 6 figs. (author)

Seven Fundamental Economic Characteristics Exclusivity of Agrifood Supply Chains (part 2

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Thomas L. Sporleder

2013-12-01

Full Text Available This analysis focuses on defining and describing the unique economic characteristics of agrifood supply chains. The analysis includes seven specific economic characteristics of agrifood supply chains that distinguish them from other industrial manufacturing and service supply chains. The seven characteristics are: 1 risk emanating from the biological nature of agrifood supply chains, 2 the role of buffer stocks within the supply chain, 3 the scientific foundation of innovation in production agriculture having shifted from chemistry to biology, 4 cyberspace and information technology influences on agrifood supply chains, 5 the prevalent market structure at the farm gate remains oligopsony, 6 relative market power shifts in agrifood supply chains away from food manufacturers downstream to food retailers, and 7 globalization of agriculture and agri- food supply chains.

Analysis of biological spectrum of Divčibare flora

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Popović Ivana

2006-01-01

Full Text Available One of the essential analyses which is performed during the floristic study of a region is the analysis of the biological spectrum. The analysis of the biological spectrum of the flora includes the determination of the type of life form for each taxon described in the flora of the study region. If it is considered that life form is a specific structural-functional response to the environmental effects and the result of the adaptation during the species evolution, it is clear that the basic characteristics of the site are more or less reflected in any life form. This fact is confirmed by the analysis of the biological spectrum of Divčibare flora. The study results are in correlation with the results of the analysis of the biological spectrum of the flora of Serbia and the Balkan Peninsula.

Metal-induced stress in bivalves living along a gradient of Cd contamination: relating sub-cellular metal distribution to population-level responses

International Nuclear Information System (INIS)

Perceval, Olivier; Couillard, Yves; Pinel-Alloul, Bernadette; Giguere, Anik; Campbell, Peter G.C.

2004-01-01

The use of biomarkers to assess the impacts of contaminants on aquatic ecosystems has noticeably increased over the past few years. Few of these studies, however, have contributed to the prediction of ecologically significant effects (i.e., at the population or community levels). The present field study was designed to evaluate the potential of metallothionein (MT) and sub-cellular metal partitioning measurements for predicting toxic effects at higher levels of the biological organization in freshwater bivalves (Pyganodon grandis) chronically exposed to Cd. For that purpose, we quantitatively sampled P. grandis populations in the littoral zone of nine lakes on the Precambrian Canadian Shield during two consecutive summers (1998 and 1999); lakes were characterized by contrasting Cd levels but similar trophic status. We tested relationships between the population status of P. grandis (i.e., growth parameters, density, biomass, secondary production, turnover ratio and cumulative fecundity) and (i) ambient Cd concentrations, (ii) sub-organismal responses (MT concentrations in the gill cytosol of individuals and Cd concentrations in three metal-ligand pools identified as M-HMW, the high molecular weight pool, M-MT, the metallothionein-like pool and M-LMW, the low molecular weight pool) and (iii) ecological confounding factors (food resources, presence of host fishes for the obligatory parasitic larval stage of P. grandis). Our results show that littoral density, live weight, dry viscera biomass, production and cumulative fecundity decreased with increasing concentrations of the free-cadmium ion in the environment (Pearson's r ranging from -0.63 to -0.78). On the other hand, theoretical maximum shell lengths (L ∞ ) in our populations were related to both the dissolved Ca concentration and food quality (sestonic C and N concentrations). Overall, Cd concentrations in the gill cytosolic HMW pool of the individual molluscs were the biomarker response that was most

Quantum physics meets biology.

Science.gov (United States)

Arndt, Markus; Juffmann, Thomas; Vedral, Vlatko

2009-12-01

Quantum physics and biology have long been regarded as unrelated disciplines, describing nature at the inanimate microlevel on the one hand and living species on the other hand. Over the past decades the life sciences have succeeded in providing ever more and refined explanations of macroscopic phenomena that were based on an improved understanding of molecular structures and mechanisms. Simultaneously, quantum physics, originally rooted in a world-view of quantum coherences, entanglement, and other nonclassical effects, has been heading toward systems of increasing complexity. The present perspective article shall serve as a "pedestrian guide" to the growing interconnections between the two fields. We recapitulate the generic and sometimes unintuitive characteristics of quantum physics and point to a number of applications in the life sciences. We discuss our criteria for a future "quantum biology," its current status, recent experimental progress, and also the restrictions that nature imposes on bold extrapolations of quantum theory to macroscopic phenomena.

Biological and Climate Controls on North Atlantic Marine Carbon Dynamics Over the Last Millennium: Insights From an Absolutely Dated Shell-Based Record From the North Icelandic Shelf

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Reynolds, D. J.; Hall, I. R.; Scourse, J. D.; Richardson, C. A.; Wanamaker, A. D.; Butler, P. G.

2017-12-01

Given the rapid increase in atmospheric carbon dioxide concentrations (pCO2) over the industrial era, there is a pressing need to construct long-term records of natural carbon cycling prior to this perturbation and to develop a more robust understanding of the role the oceans play in the sequestration of atmospheric carbon. Here we reconstruct the past biological and climate controls on the carbon isotopic (δ13Cshell) composition of the North Icelandic shelf waters over the last millennium, derived from the shells of the long-lived marine bivalve mollusk Arctica islandica. Variability in the annually resolved δ13Cshell record is dominated by multidecadal variability with a negative trend (-0.003 ± 0.002‰ yr-1) over the industrial era (1800-2000 Common Era). This trend is consistent with the marine Suess effect brought about by the sequestration of isotopically light carbon (δ13C of CO2) derived from the burning of fossil fuels. Comparison of the δ13Cshell record with Contemporaneous proxy archives, over the last millennium, and instrumental data over the twentieth century, highlights that both biological (primary production) and physical environmental factors, such as relative shifts in the proportion of Subpolar Mode Waters and Arctic Intermediate Waters entrained onto the North Icelandic shelf, atmospheric circulation patterns associated with the winter North Atlantic Oscillation, and sea surface temperature and salinity of the subpolar gyre, are the likely mechanisms that contribute to natural variations in seawater δ13C variability on the North Icelandic shelf. Contrasting δ13C fractionation processes associated with these biological and physical mechanisms likely cause the attenuated marine Suess effect signal at this locality.

Eocene Antarctic seasonality inferred from high-resolution stable isotope profiles of fossil bivalves and driftwood

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Judd, E. J.; Ivany, L. C.; Miklus, N. M.; Uveges, B. T.; Junium, C. K.

2017-12-01

The Eocene Epoch was a time of large-scale global climate change, experiencing both the warmest temperatures of the Cenozoic and the onset of southern hemisphere glaciation. The record of average global temperatures throughout this transition is reasonably well constrained, however considerably less is known about the accompanying changes in seasonality. Seasonally resolved temperature data provide a wealth of information not readily available from mean annual temperature data alone. These data are particularly important in the climatically sensitive high latitudes, as they can elucidate the means by which climate changes and the conditions necessary for the growth of ice sheets. Several recent studies, however, have suggested the potential for monsoonal precipitation regimes in the early-middle Eocene high latitudes, which complicates interpretation of seasonally resolved oxygen isotope records in shallow nearshore marine settings. Seasonal precipitation and runoff could create a brackish, isotopically depleted lens in these environments, depleting summertime δ18Ocarb and thereby inflating the inferred mean and range of isotope-derived temperatures. Here, we assess intra-annual variations in temperature in shallow nearshore Antarctic waters during the middle and late Eocene, inferred from high-resolution oxygen isotope profiles from accretionary bivalves of the La Meseta Formation, Seymour Island, Antarctica. To address concerns related to precipitation and runoff, we also subsample exceptionally preserved fossil driftwood from within the formation and use seasonal differences in δ13Corg values to estimate the ratio of summertime to wintertime precipitation. Late Eocene oxygen isotope profiles exhibit strongly attenuated seasonal amplitudes and more enriched mean annual values in comparison with data from the middle Eocene. Preliminary fossil wood data are not indicative of a strongly seasonal precipitation regime, implying that intra-annual variation in oxygen

Lichens as biological indicators

Energy Technology Data Exchange (ETDEWEB)

Richardson, H S

1981-09-15

Lichens, a symbiotic association of an alga and a fungus, have been used for some years as 'bioindicators', to detect environmental pollution. For this, their property of reacting to certain pollutants with characteristic changes of growth is exploired. With this biological method, continual, sufficiently sensitive measurements over wide areas can often be carried out more simply than with expensive, complicated technical equipment, which requires servicing, as well. This article describes the various possibilities of using lichens as bioindicators, and reviews the methods currently in use for measuring air pollution by means of lichens.

Biologicals versus biosimilars the future ahead

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A Singhal

2015-01-01

Full Text Available Biosimilars are highly similar versions of already authorized innovator biological therapies. They demonstrate no clinically meaningful difference with their innovator products in terms of efficacy, safety and quality characteristics and biological activity. Biosimilars have demonstrated growing acceptance and use, especially in the developing countries due to severe cost constraints. Global market for Indian non-innovator products is approximately worth USD 1.5 Billion/annum with an annual growth rate of 27%. Estimated exports of Indian biopharmaceutical products have been increasing at a rate of 47%. In India, there is a good acceptance of non-innovator healthcare products amongst healthcare professionals and patients. Several home grown biopharmaceutical industries are now actively developing and marketing non innovator products in India.

Biological evolution: Some genetic considerations

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Mohammad Saad Zaghloul Salem

2014-01-01

Conclusion: Natural selection might be observed in nature but not in life. The concept of biological evolution is an illogic and insensible hypothesis since it stands in direct contradiction with our current knowledge regarding the behavior as well as the structural and functional characteristics of the human genome and human proteome. Additionally, almost all basic postulations of this concept can neither be tested nor imitated for experimentation, which is a prerequisite for acceptance and validation of any scientific hypotheses.

Morphological and biological features of seedlings of some Trifolium species

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Valentina A. Kalinkina

2013-04-01

Full Text Available The author conducted morphological and biological characteristics of seedlings of six species belonging to three sections: Lupinaster(T. lupinasterL, T. pacificumBobr, T. eximium Steph. Ex. DC., Chronosemium(T. campestre Schreb. and Trifolium (T. arvenseL., T. pratense L. of the genus Trifolium. Dimensional and qualitative morphological characteristics of the main structural elements of the seedlings of these species are represented in the article.

Biology Needs Evolutionary Software Tools: Let’s Build Them Right

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Team, Galaxy; Goecks, Jeremy; Taylor, James

2018-01-01

Abstract Research in population genetics and evolutionary biology has always provided a computational backbone for life sciences as a whole. Today evolutionary and population biology reasoning are essential for interpretation of large complex datasets that are characteristic of all domains of today’s life sciences ranging from cancer biology to microbial ecology. This situation makes algorithms and software tools developed by our community more important than ever before. This means that we, developers of software tool for molecular evolutionary analyses, now have a shared responsibility to make these tools accessible using modern technological developments as well as provide adequate documentation and training. PMID:29688462

Seamount physiography and biology in North-East Atlantic and Mediterranean Sea

OpenAIRE

T. Morato; K. Ø. Kvile; G. H. Taranto; F. Tempera; B. E. Narayanaswamy; D. Hebbeln; G. Menezes; C. Wienberg; R. S. Santos; T. J. Pitcher

2012-01-01

This work aims at characterising the seamount physiography and biology in the OSPAR Convention limits (North-East Atlantic Ocean) and Mediterranean Sea. We first inferred potential abundance, location and morphological characteristics of seamounts, and secondly, summarized the existing biological, geological and oceanographic in-situ research, identifying examples of well-studied seamounts. Our study showed that the seamount population in the OSPAR area (North-East Atlantic) and in Mediterran...

[Cell phone communication: hygienic characteristics, biological action, standardization (a review)].

Science.gov (United States)

Gudina, M V; Volkotrub, L P

2010-01-01

The paper considers the topical issues concerning the functioning of the cellular communication system. It provides the hygienic characteristics of its individual elements. The factors influencing the size of an electromagnetic field generated by mobile phones are stated. Research data on the impact of electromagnetic radiation from a mobile phone on users' health are reviewed. The pivots of present-day Russian hygienic rating regarding the permissible exposures to nonionizing electromagnetic energy generated by the elements of the cellular communication system are identified.

Pengaruh Zooxanthellae Karaug Terhadap Kelangsungan Hidup Dan Pertumbuhan Kerang Raksasa Kima (Tridacna Squamosa)

OpenAIRE

Ambariyanto, Ambariyanto

2007-01-01

The influence of zooxanthellae isolated from corals on the growth and suwivorshipof giant clams. Giant clam known as marine bivalves (Tridacnidae) which live in coralreef. One important aspect of giant clam biology is the existence of zooxanthellae assymbiotic algae which have important role source of energy In hatchery operationalprocedure zooxanthellae were introduced into larvae. Zooxanthellae were isolated fromadult clams. Since clams are also known as endangered species, it is important ...

Design and validation of general biology learning program based on scientific inquiry skills

Science.gov (United States)

Cahyani, R.; Mardiana, D.; Noviantoro, N.

2018-03-01

Scientific inquiry is highly recommended to teach science. The reality in the schools and colleges is that many educators still have not implemented inquiry learning because of their lack of understanding. The study aims to1) analyze students’ difficulties in learning General Biology, 2) design General Biology learning program based on multimedia-assisted scientific inquiry learning, and 3) validate the proposed design. The method used was Research and Development. The subjects of the study were 27 pre-service students of general elementary school/Islamic elementary schools. The workflow of program design includes identifying learning difficulties of General Biology, designing course programs, and designing instruments and assessment rubrics. The program design is made for four lecture sessions. Validation of all learning tools were performed by expert judge. The results showed that: 1) there are some problems identified in General Biology lectures; 2) the designed products include learning programs, multimedia characteristics, worksheet characteristics, and, scientific attitudes; and 3) expert validation shows that all program designs are valid and can be used with minor revisions. The first section in your paper.

Commercial-biological characteristics of tulka (Clupeonella cultriventris Nordmann, 1840 of the Dnieper-Bug estuary system

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K. Geina

2017-12-01

=17.42 and Cv=15.92%, respectively. The variability of body weight in fish of the right wing of the age series depended by a stable prevalence of females in the stock structure, which were characterized by more significant fluctuations of mean weight due to differences during sexual gland development. The condition factor of tulka was high, Fulton’s condition factor values varied from 0.85 to 1.04. At the same time, a gradual growth of the condition factor with an increase in age was observed. The highest variability of the condition factor was typical for age-2 and age-3 fish – Cv=12.8-15.2%. Originality. The paper contains new as well as updated already existing data on major biological characteristics of the commercial stock of tulka in transformed conditions of fish fauna existence in the Dnieper-Bug estuary system. Practical value. The obtained results are a scientific basis for rational fishery and optimization of fishing pressure on this clupeid species of the Dnieper-Bug estuary system. Under the current conditions, the provided information is topical from the point of view of the improvement of the trophological status of a valuable fishery water body in the context of the reduction of the level of trophic competition between juveniles of semi-migratory fish species and typical zooplantonivorous species such as tulka, which currently increased its abundance.

Racial and Ethnic Disparity in Symptomatic Breast Cancer Awareness despite a Recent Screen: The Role of Tumor Biology and Mammography Facility Characteristics.

Science.gov (United States)

Mortel, Mylove; Rauscher, Garth H; Murphy, Anne Marie; Hoskins, Kent; Warnecke, Richard B

2015-10-01

In a racially and ethnically diverse sample of recently diagnosed urban patients with breast cancer, we examined associations of patient, tumor biology, and mammography facility characteristics on the probability of symptomatic discovery of their breast cancer despite a recent prior screening mammogram. In the Breast Cancer Care in Chicago study, self-reports at interview were used to define patients as having a screen-detected breast cancer or having symptomatic awareness despite a recent screening mammogram (SADRS), in the past 1 or 2 years. Patients with symptomatic breast cancer who did not report a recent prior screen were excluded from these analyses. Characteristics associated with more aggressive disease [estrogen receptor (ER)- and progesterone receptor (PR)-negative status and higher tumor grade] were abstracted from medical records. Mammogram facility characteristics that might indicate aspects of screening quality were defined and controlled for in some analyses. SADRS was more common among non-Hispanic black and Hispanic than among non-Hispanic white patients (36% and 42% vs. 25%, respectively, P = 0.0004). SADRS was associated with ER/PR-negative and higher-grade disease. Patients screened at sites that relied on dedicated radiologists and sites that were breast imaging centers of excellence were less likely to report SADRS. Tumor and facility factors together accounted for two thirds of the disparity in SADRS (proportion mediated = 70%, P = 0.02). Facility resources and tumor aggressiveness explain much of the racial/ethnic disparity in symptomatic breast cancer among recently screened patients. A more equitable distribution of high-quality screening would ameliorate but not eliminate this disparity. ©2015 American Association for Cancer Research.

Unified Deep Learning Architecture for Modeling Biology Sequence.

Science.gov (United States)

Wu, Hongjie; Cao, Chengyuan; Xia, Xiaoyan; Lu, Qiang

2017-10-09

Prediction of the spatial structure or function of biological macromolecules based on their sequence remains an important challenge in bioinformatics. When modeling biological sequences using traditional sequencing models, characteristics, such as long-range interactions between basic units, the complicated and variable output of labeled structures, and the variable length of biological sequences, usually lead to different solutions on a case-by-case basis. This study proposed the use of bidirectional recurrent neural networks based on long short-term memory or a gated recurrent unit to capture long-range interactions by designing the optional reshape operator to adapt to the diversity of the output labels and implementing a training algorithm to support the training of sequence models capable of processing variable-length sequences. Additionally, the merge and pooling operators enhanced the ability to capture short-range interactions between basic units of biological sequences. The proposed deep-learning model and its training algorithm might be capable of solving currently known biological sequence-modeling problems through the use of a unified framework. We validated our model on one of the most difficult biological sequence-modeling problems currently known, with our results indicating the ability of the model to obtain predictions of protein residue interactions that exceeded the accuracy of current popular approaches by 10% based on multiple benchmarks.

Computing Platforms for Big Biological Data Analytics: Perspectives and Challenges.

Science.gov (United States)

Yin, Zekun; Lan, Haidong; Tan, Guangming; Lu, Mian; Vasilakos, Athanasios V; Liu, Weiguo

2017-01-01

The last decade has witnessed an explosion in the amount of available biological sequence data, due to the rapid progress of high-throughput sequencing projects. However, the biological data amount is becoming so great that traditional data analysis platforms and methods can no longer meet the need to rapidly perform data analysis tasks in life sciences. As a result, both biologists and computer scientists are facing the challenge of gaining a profound insight into the deepest biological functions from big biological data. This in turn requires massive computational resources. Therefore, high performance computing (HPC) platforms are highly needed as well as efficient and scalable algorithms that can take advantage of these platforms. In this paper, we survey the state-of-the-art HPC platforms for big biological data analytics. We first list the characteristics of big biological data and popular computing platforms. Then we provide a taxonomy of different biological data analysis applications and a survey of the way they have been mapped onto various computing platforms. After that, we present a case study to compare the efficiency of different computing platforms for handling the classical biological sequence alignment problem. At last we discuss the open issues in big biological data analytics.

Future strategy and puzzles of heavy ion beam mediated technique in genetic improvement of biological bodies

International Nuclear Information System (INIS)

Huang Qunce

2007-01-01

The 7 research puzzles in the genetic improvement of biological bodies made by ion beam mediated technique, are worth noticed. The technical ideas, including one mediated technique in physics, 2 significant subjects, 3 effective changes, the mediated evidences of 4 aspects and 5 biological characteristics, were particularly put forward according to the existing states in the field. The 2 significant subjects consist of the mechanics of the allogenetic materials entering into the acceptor and they being to be recombined. The 3 effective changes include from studying morphology to genetic laws, from researching M1 generation to the next generations, from determining the single character to the synthetic traits. The mediated evidences of 4 aspects come from morphology, physiology and biochemistry, molecule biology. The 5 biological characteristics are mainly reproduction, development, photosynthesis, bad condition-resistant and quality. (authors)

The molecular biology of WHO grade I astrocytomas.

Science.gov (United States)

Marko, Nicholas F; Weil, Robert J

2012-12-01

World Health Organization (WHO) grade I astrocytomas include pilocytic astrocytoma (PA) and subependymal giant cell astrocytoma (SEGA). As technologies in pharmacologic neo-adjuvant therapy continue to progress and as molecular characteristics are progressively recognized as potential markers of both clinically significant tumor subtypes and response to therapy, interest in the biology of these tumors has surged. An updated review of the current knowledge of the molecular biology of these tumors is needed. We conducted a Medline search to identify published literature discussing the molecular biology of grade I astrocytomas. We then summarized this literature and discuss it in a logical framework through which the complex biology of these tumors can be clearly understood. A comprehensive review of the molecular biology of WHO grade I astrocytomas is presented. The past several years have seen rapid progress in the level of understanding of PA in particular, but the molecular literature regarding both PA and SEGA remains nebulous, ambiguous, and occasionally contradictory. In this review we provide a comprehensive discussion of the current understanding of the chromosomal, genomic, and epigenomic features of both PA and SEGA and provide a logical framework in which these data can be more readily understood.

Networks In Real Space: Characteristics and Analysis for Biology and Mechanics

Science.gov (United States)

Modes, Carl; Magnasco, Marcelo; Katifori, Eleni

Functional networks embedded in physical space play a crucial role in countless biological and physical systems, from the efficient dissemination of oxygen, blood sugars, and hormonal signals in vascular systems to the complex relaying of informational signals in the brain to the distribution of stress and strain in architecture or static sand piles. Unlike their more-studied abstract cousins, such as the hyperlinked internet, social networks, or economic and financial connections, these networks are both constrained by and intimately connected to the physicality of their real, embedding space. We report on the results of new computational and analytic approaches tailored to these physical networks with particular implications and insights for mammalian organ vasculature.

The complete genome of Teredinibacter turnerae T7901: an intracellular endosymbiont of marine wood-boring bivalves (shipworms.

Directory of Open Access Journals (Sweden)

Joyce C Yang

Full Text Available Here we report the complete genome sequence of Teredinibacter turnerae T7901. T. turnerae is a marine gamma proteobacterium that occurs as an intracellular endosymbiont in the gills of wood-boring marine bivalves of the family Teredinidae (shipworms. This species is the sole cultivated member of an endosymbiotic consortium thought to provide the host with enzymes, including cellulases and nitrogenase, critical for digestion of wood and supplementation of the host's nitrogen-deficient diet. T. turnerae is closely related to the free-living marine polysaccharide degrading bacterium Saccharophagus degradans str. 2-40 and to as yet uncultivated endosymbionts with which it coexists in shipworm cells. Like S. degradans, the T. turnerae genome encodes a large number of enzymes predicted to be involved in complex polysaccharide degradation (>100. However, unlike S. degradans, which degrades a broad spectrum (>10 classes of complex plant, fungal and algal polysaccharides, T. turnerae primarily encodes enzymes associated with deconstruction of terrestrial woody plant material. Also unlike S. degradans and many other eubacteria, T. turnerae dedicates a large proportion of its genome to genes predicted to function in secondary metabolism. Despite its intracellular niche, the T. turnerae genome lacks many features associated with obligate intracellular existence (e.g. reduced genome size, reduced %G+C, loss of genes of core metabolism and displays evidence of adaptations common to free-living bacteria (e.g. defense against bacteriophage infection. These results suggest that T. turnerae is likely a facultative intracellular ensosymbiont whose niche presently includes, or recently included, free-living existence. As such, the T. turnerae genome provides insights into the range of genomic adaptations associated with intracellular endosymbiosis as well as enzymatic mechanisms relevant to the recycling of plant materials in marine environments and the production

Cretaceous honeycomb oysters (Pycnodonte vesicularis) as palaeoseasonality records: A multi-proxy study

Science.gov (United States)

de Winter, Niels J.; Vellekoop, Johan; Vorsselmans, Robin; Golreihan, Asefeh; Petersen, Sierra V.; Meyer, Kyle W.; Speijer, Robert P.; Claeys, Philippe

2017-04-01

Pycnodonte or "honeycomb-oysters" (Bivalvia: Gryphaeidea) is an extinct genus of calcite-producing bivalves which is found in abundance in Cretaceous to Pleistocene fossil beds worldwide. As such, Pycnodonte shells could be ideal tracers of palaeoclimate through time, with the capability to reconstruct sea water conditions and palaeotemperatures in a range of palaeoenvironmental settings. Only few studies have attempted to reconstruct palaeoclimate based on Pycnodonte shells and with variable degrees of success (e.g. Videt, 2003; Huyge et al., 2015). Our study investigates the shell growth, structure and chemical characteristics of Maastrichtian Pycnodonte vesicularis from Bajada de Jaguel in Argentina and aims to rigorously test the application of multiple palaeoenvironmental proxies on the shells of several Maastrichtian Pycnodonte oysters for palaeoclimate reconstruction. The preservation state of four calcite shells was assessed by fluorescence microscopy, cathodoluminescence and micro X-Ray Fluorescence (XRF) mapping. Their shell structure was investigated using a combination of XRF mapping, high-resolution color scanning and microCT scanning. Long integration time point-by-point XRF line scanning yielded high-resolution trace element profiles through the hinge of all shells. Microdrilled samples from the same locations on the shell were analyzed for trace element composition by ICP-MS and for stable carbon and oxygen isotopes by IRMS. Preservation of the calcite microstructure was found to be of sufficient quality to allow discussion of original shell porosity, annual growth increments and pristine chemical signatures of the bivalves. The combination of fluorescence and cathodoluminescence microscopy with XRF mapping and microCT scanning sheds light on the characteristic internal "honeycomb" structure of these extinct bivalves and allows comparison with that of the related extant Neopycnodonte bivalves (Wisshak et al., 2009). Furthermore, high resolution

The Biological Activities of Sesterterpenoid-Type Ophiobolins

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Wei Tian

2017-07-01

Full Text Available Ophiobolins (Ophs are a group of tricarbocyclic sesterterpenoids whose structures contain a tricyclic 5-8-5 carbotricyclic skeleton. Thus far, 49 natural Ophs have been reported and assigned into A–W subgroups in order of discovery. While these sesterterpenoids were first characterized as highly effective phytotoxins, later investigations demonstrated that they display a broad spectrum of biological and pharmacological characteristics such as phytotoxic, antimicrobial, nematocidal, cytotoxic, anti-influenza and inflammation-promoting activities. These bioactive molecules are promising drug candidates due to the developments of their anti-proliferative activities against a vast number of cancer cell lines, multidrug resistance (MDR cells and cancer stem cells (CSCs. Despite numerous studies on the biological functions of Ophs, their pharmacological mechanism still requires further research. This review summarizes the chemical structures, sources, and biological activities of the oph family and discusses its mechanisms and structure–activity relationship to lay the foundation for the future developments and applications of these promising molecules.

The Biological Activities of Sesterterpenoid-Type Ophiobolins.

Science.gov (United States)

Tian, Wei; Deng, Zixin; Hong, Kui

2017-07-18

Ophiobolins (Ophs) are a group of tricarbocyclic sesterterpenoids whose structures contain a tricyclic 5-8-5 carbotricyclic skeleton. Thus far, 49 natural Ophs have been reported and assigned into A-W subgroups in order of discovery. While these sesterterpenoids were first characterized as highly effective phytotoxins, later investigations demonstrated that they display a broad spectrum of biological and pharmacological characteristics such as phytotoxic, antimicrobial, nematocidal, cytotoxic, anti-influenza and inflammation-promoting activities. These bioactive molecules are promising drug candidates due to the developments of their anti-proliferative activities against a vast number of cancer cell lines, multidrug resistance (MDR) cells and cancer stem cells (CSCs). Despite numerous studies on the biological functions of Ophs, their pharmacological mechanism still requires further research. This review summarizes the chemical structures, sources, and biological activities of the oph family and discusses its mechanisms and structure-activity relationship to lay the foundation for the future developments and applications of these promising molecules.

A new source of mesenchymal stem cells for articular cartilage repair: MSCs derived from mobilized peripheral blood share similar biological characteristics in vitro and chondrogenesis in vivo as MSCs from bone marrow in a rabbit model.

Science.gov (United States)

Fu, Wei-Li; Zhou, Chun-Yan; Yu, Jia-Kuo

2014-03-01

Bone marrow (BM) has been considered as a major source of mesenchymal stem cells (MSCs), but it has many disadvantages in clinical application. However, MSCs from peripheral blood (PB) could be obtained by a less invasive method and be more beneficial for autologous transplantation than BM MSCs, which makes PB a promising source for articular cartilage repair in clinical use. To assess whether MSCs from mobilized PB of New Zealand White rabbits have similar biological characteristics in vitro and chondrogenesis in vivo as BM MSCs. Controlled laboratory study. A combined method of drug administration containing granulocyte colony stimulating factor (G-CSF) plus CXCR4 antagonist AMD3100 was adopted to mobilize the PB stem cells of adult New Zealand White rabbits in vitro. The isolated cells were identified as MSCs by morphological characteristics, surface markers, and differentiation potentials. A comparison between PB MSCs and BM MSCs was made in terms of biological characteristics in vitro and chondrogenesis in vivo. This issue was investigated from the aspects of morphology, immune phenotype, multiple differentiation capacity, expansion potential, antiapoptotic capacity, and ability to repair cartilage defects in vivo of PB MSCs compared with BM MSCs. Peripheral blood MSCs were successfully mobilized by the method of combined drug administration, then isolated, expanded, and identified in vitro. No significant difference was found concerning the morphology, immune phenotype, and antiapoptotic capacity between PB MSCs and BM MSCs. Significantly, MSCs from both sources compounded with decalcified bone matrix showed the same ability to repair cartilage defects in vivo. For multipluripotency, BM MSCs exhibited a more osteogenic potential and higher proliferation capacity than PB MSCs, whereas PB MSCs possessed a stronger adipogenic and chondrogenic differentiation potential than BM MSCs in vitro. Although there are some differences in the proliferation and

The relationship between biological cognitive and psychosocial characteristics of parents and the weight of infant at the time of birth in Isfahan.

Science.gov (United States)

Talebian, Mohammad Hassan; Afrooz, Gholam Ali; Hooman, Heidar Ali; Aghaei, Asghar

2013-01-01

The present study was connected in order to evaluate the relationship between biological, cognitive and psychosocial characteristics of mothers and the weight of infant at the time of birth. In order to conduct this research a sample of 910 women among recently delivered mothers of Isfahan province in 2009 were selected. From stratified sampling and cluster sampling according to the percentage of population in each of the cities of Isfahan Province was used. The data was gathered with a questionnaire prepared by the researcher in order to evaluate the biological cognitive and psychosocial characteristics of mothers, in addition to the Enrich marital satisfaction test. After collecting data, the analysis of the data was done with SPSS software in two categories of descriptive and inferential statistics by using logistic regression model. The results showed that the prevalence of low weight infants was 9.5 percent and 38.7 percent of pregnancies was unwanted. Twenty-nine percent of mothers had marital dissatisfaction. 15/6 percent of pregnancies were below 20 years old and 22 percent was above of 35 years old. 38.9 percent of mothers were exposed to cigarette smoke. The average of weight gain during pregnancies was 9 kilograms. Thirty three percent of mothers had high blood pressure during pregnancy, 26.7 percent had history of abortion and 31.9 percent had history of bleeding. 23/1percent of women was employed during pregnancy, 19.8 percent gave twin birth and 21/1 percent of parents were relative of each other, 29.7 percent of deliveries were done in cesarean way. The results of this study showed that severe marital dissatisfaction, abnormal blood pressure during pregnancy, being employed during pregnancy, weight gain less than 5 Kg during pregnancy, pregnancy below the age of 20 can meaning fully increase the possibility of low birth weight in infant (α=0.05). The results were consisting with the previous findings and indicated that some of the applicable

Biomonitoring study of an estuarine coastal ecosystem, the Sacca di Goro lagoon, using Ruditapes philippinarum (Mollusca: Bivalvia)

International Nuclear Information System (INIS)

Sacchi, Angela; Mouneyrac, Catherine; Bolognesi, Claudia; Sciutto, Andrea; Roggieri, Paola; Fusi, Marco; Beone, Gian Maria; Capri, Ettore

2013-01-01

Coastal lagoons are constantly subjected to releases of chemical pollutants, and so organisms may be exposed to such toxicants. This study investigated through a multivariate approach the physiological status of bivalve Ruditapes philippinarum, farmed in Sacca di Goro lagoon. Biomarkers at different levels of biological organization (catalase, superoxide dismutase, genotoxicity, reburrowing behavior) were evaluated at three sites exposed to different environmental conditions. A seasonal trend was observed, and micronucleus frequency was significantly lowest at the relatively pristine reference site. Enzymatic activity toward oxyradicals be quite efficient since variations in responsiveness were not consistent. However, behavioral impairment was observed in reburrowing rates. Sediment concentrations showed low PAH levels and high natural levels of trace metals Cr and Ni. DistLM statistical analysis revealed a non-significant relationship between selected biomarkers and xenobiotics. Therefore other potentially toxic compounds in admixture at low doses may be involved in driving differing spatial distribution of physiological impairment. -- Highlights: ► Health status assessment of bivalve Ruditapes philippinarum, from lagoon of Sacca di Goro. ► Multiparametric approach (chemical analysis, biochemical and behavioral biomarkers). ► Impairments of burrowing kinetics in the contaminated site. ► Micronucleus genotoxicity test to detect effects of contaminants complex mixture. ► Multiple stress of chemicals in estuarine costal ecosystem. -- The bivalve Ruditapes philippinarum as a bioindicator in monitoring pollution of estuaries

Ecology of the wood-boring bivalve Martesia striata (Pholadidae) in Indian waters

Digital Repository Service at National Institute of Oceanography (India)

Yennawar, P.L.; Thakur, N.L.; Anil, A.C.; Venkat, K.; Wagh, A.B.

, destruction pattern of wood in the environment and reporductive biology indicate that although recruitment is halted during the monsoon, adults survive and become reproductively mature in the following post-monsoon, leading to increased recruitment during pre...