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Sample records for biscogniauxia mediterranea syn

  1. Biscogniauxone, a New Isopyrrolonaphthoquinone Compound from the Fungus Biscogniauxia mediterranea Isolated from Deep-Sea Sediments

    Directory of Open Access Journals (Sweden)

    Bin Wu

    2016-11-01

    Full Text Available The properties and the production of new metabolites from the fungal strain LF657 isolated from the Herodotes Deep (2800 m depth in the Mediterranean Sea are reported in this study. The new isolate was identified as Biscogniauxia mediterranea based on ITS1-5.8S-ITS2 and 28S rRNA gene sequences. A new isopyrrolonaphthoquinone with inhibitory activity against glycogen synthase kinase (GSK-3β was isolated from this fungus. This is the first report of this class of compounds from a fungus isolated from a deep-sea sediment, as well as from a Biscogniauxia species.

  2. Essential Oils of Myrtaceae Species Growing Wild in Tunisia: Chemical Variability and Antifungal Activity Against Biscogniauxia mediterranea, the Causative Agent of Charcoal Canker.

    Science.gov (United States)

    Yangui, Islem; Zouaoui Boutiti, Meriem; Boussaid, Mohamed; Messaoud, Chokri

    2017-07-01

    The chemical composition of five Eucalyptus species and five Myrtus communis L. populations was investigated using GC/MS and GC-FID. For Eucalyptus essential oils, 32 compounds, representing 88.56 - 96.83% of the total oil according to species, were identified. The main compounds were 1,8-cineole, α-pinene, p-cymene, γ-gurjunene, α-aromadendrene, and β-phellandrene. For Myrtle essential oils, 26 compounds, representing 93.13 - 98.91% of the total oil were identified. α-Pinene, 1,8-cineole, linalool, and myrtenyl acetate were found to be the major compounds. Principal component analysis (PCA) showed chemical differentiation between Eucalyptus species and between Myrtle populations. Biscogniauxia mediterranea, the causative agent of charcoal canker, was identified according to its morphological and molecular characteristics. Essential oils of the investigated Eucalyptus species and Myrtle populations were tested for their antifungal capacity against this fungus. The antifungal activity varied according to the essential oil composition. Biscogniauxia mediterranea exhibited powerful resistance to some essential oils including them of Eucalyptus lehmannii and Eucalyptus sideroxylon but it was very sensitive to Eucalyptus camaldulensis oil (IC 50  = 3.83 mg/ml) and M. communis oil from Zaghouan (IC 50  = 1 mg/ml). This sensitivity was found to be correlated to some essential oil compounds such as p-cymene, carvacrol, cuminaldehyde, and linalool. © 2017 Wiley-VHCA AG, Zurich, Switzerland.

  3. SynGrant

    Indian Academy of Sciences (India)

    IAS Admin

    There are no requirements of nationality, age, gender, education, income, language, or material/social accomplishments. SynTalk would consider the long term (100–200+ years) impact potential of the chosen research area, and, all else being equal, give preference to applicants who do not have access to mainstream ...

  4. Py4Syn: Python for synchrotrons.

    Science.gov (United States)

    Slepicka, H H; Canova, H F; Beniz, D B; Piton, J R

    2015-09-01

    In this report, Py4Syn, an open-source Python-based library for data acquisition, device manipulation, scan routines and other helper functions, is presented. Driven by easy-to-use and scalability ideals, Py4Syn offers control system agnostic solution and high customization level for scans and data output, covering distinct techniques and facilities. Here, most of the library functionalities are described, examples of use are shown and ideas for future implementations are presented.

  5. Schmidtea mediterranea phylogeography: an old species surviving on a few Mediterranean islands?

    Directory of Open Access Journals (Sweden)

    Pala Maria

    2011-09-01

    Full Text Available Abstract Background Schmidtea mediterranea (Platyhelminthes, Tricladida, Continenticola is found in scattered localities on a few islands and in coastal areas of the western Mediterranean. Although S. mediterranea is the object of many regeneration studies, little is known about its evolutionary history. Its present distribution has been proposed to stem from the fragmentation and migration of the Corsica-Sardinia microplate during the formation of the western Mediterranean basin, which implies an ancient origin for the species. To test this hypothesis, we obtained a large number of samples from across its distribution area. Using known and new molecular markers and, for the first time in planarians, a molecular clock, we analysed the genetic variability and demographic parameters within the species and between its sexual and asexual populations to estimate when they diverged. Results A total of 2 kb from three markers (COI, CYB and a nuclear intron N13 was amplified from ~200 specimens. Molecular data clustered the studied populations into three groups that correspond to the west, central and southeastern geographical locations of the current distribution of S. mediterranea. Mitochondrial genes show low haplotype and nucleotide diversity within populations but demonstrate higher values when all individuals are considered. The nuclear marker shows higher values of genetic diversity than the mitochondrial genes at the population level, but asexual populations present lower variability than the sexual ones. Neutrality tests are significant for some populations. Phylogenetic and dating analyses show the three groups to be monophyletic, with the west group being the basal group. The time when the diversification of the species occurred is between ~20 and ~4 mya, although the asexual nature of the western populations could have affected the dating analyses. Conclusions S. mediterranea is an old species that is sparsely distributed in a harsh habitat

  6. Stochastic Model of TCP SYN Attacks

    Directory of Open Access Journals (Sweden)

    Simona Ramanauskaitė

    2011-08-01

    Full Text Available A great proportion of essential services are moving into internet space making the threat of DoS attacks even more actual. To estimate the real risk of some kind of denial of service (DoS attack in real world is difficult, but mathematical and software models make this task easier. In this paper we overview the ways of implementing DoS attack models and offer a stochastic model of SYN flooding attack. It allows evaluating the potential threat of SYN flooding attacks, taking into account both the legitimate system flow as well as the possible attack power. At the same time we can assess the effect of such parameters as buffer capacity, open connection storage in the buffer or filte­ring efficiency on the success of different SYN flooding attacks. This model can be used for other type of memory depletion denial of service attacks.Article in Lithuanian

  7. Characterization of SynCAM surface trafficking using a SynCAM derived ligand with high homophilic binding affinity

    International Nuclear Information System (INIS)

    Breillat, Christelle; Thoumine, Olivier; Choquet, Daniel

    2007-01-01

    In order to better probe SynCAM function in neurons, we produced a fusion protein between the extracellular domain of SynCAM1 and the constant fragment of human IgG (SynCAM-Fc). Whether in soluble form or immobilized on latex microspheres, the chimera bound specifically to the surface of hippocampal neurons and recruited endogenous SynCAM molecules. SynCAM-Fc was also used in combination with Quantum Dots to follow the mobility of transfected SynCAM receptors at the neuronal surface. Both immobile and highly mobile SynCAM were found. Thus, SynCAM-Fc behaves as a high affinity ligand that can be used to study the function of SynCAM at the neuronal membrane

  8. Tryptophan hydroxylase Is Required for Eye Melanogenesis in the Planarian Schmidtea mediterranea.

    Directory of Open Access Journals (Sweden)

    Bramwell G Lambrus

    Full Text Available Melanins are ubiquitous and biologically important pigments, yet the molecular mechanisms that regulate their synthesis and biochemical composition are not fully understood. Here we present a study that supports a role for serotonin in melanin synthesis in the planarian Schmidtea mediterranea. We characterize the tryptophan hydroxylase (tph gene, which encodes the rate-limiting enzyme in serotonin synthesis, and demonstrate by RNA interference that tph is essential for melanin production in the pigment cups of the planarian photoreceptors. We exploit this phenotype to investigate the biological function of pigment cups using a quantitative light-avoidance behavioral assay. Planarians lacking eye pigment remain phototactic, indicating that eye pigmentation is not essential for light avoidance in S. mediterranea, though it improves the efficiency of the photophobic response. Finally, we show that the eye pigmentation defect observed in tph knockdown animals can be rescued by injection of either the product of TPH, 5-hydroxytryptophan (5-HTP, or serotonin. Together, these results highlight a role for serotonin in melanogenesis, perhaps as a regulatory signal or as a pigment substrate. To our knowledge, this is the first example of this relationship to be reported outside of mammalian systems.

  9. Growing Periandra mediterranea on post-mining substrate: native Fabaceae with potential for revegetation of degraded rupestrian grasslands in Brazil

    Directory of Open Access Journals (Sweden)

    Maurilio Assis Figueiredo

    2018-01-01

    Full Text Available ABSTRACT Recovery of degraded areas of rupestrian grasslands is hampered mainly by the limited knowledge regarding substrate management and the biology of native species suitable for revegetation of these areas. The aim of our study was to examine the establishment and growth of Periandra mediterranea in different textures of lateritic substrate from a mining-degraded area. The growth of P. mediterranea was evaluated using fine and coarse laterite, both with and without the addition of topsoil. Survival, dry biomass, content of chemical elements and nodulation were evaluated in ten individuals per treatment sixteen months after planting. Although the substrate has low nutrient content, yet high metal concentrations, all plants survived. Plants growing on coarse laterite had 140 % greater biomass than those growing on fine laterite. The addition of topsoil increased biomass in coarse and fine laterite by 46 and 151 %, respectively, and doubled the number of nodulated plants, regardless of grain size. The biomass accumulation of P. mediterranea to a dystrophic substrate revealed its potential for use in the revegetation of degraded areas of rupestrian grasslands. Furthermore, the addition of topsoil facilitated the association of P. mediterranea with nitrogen-fixing bacteria, and increased its growth and capacity to improve substrate fertility.

  10. Stereospecific synthesis of syn-α-oximinoamides by a three-component reaction of isocyanides, syn-chlorooximes, and carboxylic acids.

    Science.gov (United States)

    Pirali, Tracey; Mossetti, Riccardo; Galli, Simona; Tron, Gian Cesare

    2011-07-15

    A stereospecific multicomponent reaction among isocyanides, syn-chlorooximes, and carboxylic acids provides an efficient synthesis of biologically relevant syn-α-oximinoamides. © 2011 American Chemical Society

  11. Solid municipal waste management in a mediterranean sea; La gestione dei rifiuti solidi urbani in un'area mediterranea

    Energy Technology Data Exchange (ETDEWEB)

    Falcetta, M. [Ministero degli Esteri, Direzione Generale per la Cooperazione e lo Sviluppo, Rome (Italy); Grauso, S. [ENEA, Divisione Caratterizzazione del Territorio, S. Maria di Galeria, Rome (Italy); Pietrelli, L.; Sgroi, S. [ENEA, Divisione Ingegneria Ambientale, S. Maria di Galeria, Rome (Italy)

    2001-02-01

    Development and results of a co-operative project on solid waste management in Palestine. The project was the first part of a broader programme of environmental co-operation between Italy and the Palestinian National Authority. [Italian] Lo sviluppo e i risultati raggiunti da un progetto di cooperazione italo-palestinese sulla gestione dei rifiuti solidi urbani in Palestina. Il progetto si presta ad essere replicato nei Paesi in via di sviluppo mediterranea.

  12. Notice of release of Syn1 Tall Fescue

    Science.gov (United States)

    The Agricultural Research Service, U.S. Department of Agriculture announces the release of Syn1 tall fescue [Festuca arundinacea (syn., Lolium arundinaceum Darbyshire; Schedonorus phoenix (Scop.) Holub)] (PI xxxx, PI xxxx) germplasm developed by Dr. Bryan K. Kindiger at the USDA-ARS Grazinglands Res...

  13. Explosive pollination mechanism in Periandra mediterranea (Vell. Taub. (Fabaceae in the Guaribas Biological Reserve, Paraíba, Brazil

    Directory of Open Access Journals (Sweden)

    Andressa Cavalcante Meireles

    2015-09-01

    Full Text Available http://dx.doi.org/10.5007/2175-7925.2015v28n4p71 Periandra mediterranea (Vell. Taub. has papilionaceous flowers with a complex pollination mechanism. This study examined pollination and reproduction in P. mediterranea from November 2009 to October 2011 at the Guaribas Biological Reserve, Paraíba, Brazil. The petals are modified in a keel that protects the stamens and stigma; two wings surround the keel, and a standard that serves as landing platform for floral visitors. Periandra mediterranea exhibits an explosive type pollination mechanism in which the bee species Xylocopa frontalis, Acanthopus excellens and Epicharis sp., land on the standard and, due to body weight, expose the reproductive organs in the wing-keel complex. As a result, the reproductive organs of the flower come into contact with the dorsal region of the bee body, depositing pollen (i.e., nototríbic pollination. Reproductive assays showed 20% fruiting in spontaneous auto-pollination, 33% in manual auto-pollination, 33% in manual cross-pollination, and 100% in the control group, with no reproductive success while in apomixis. These results demonstrate self-compatibility in this species, however it depends on pollinators to ensure reproductive success.

  14. Explosive pollination mechanism in Periandra mediterranea (Vell. Taub. (Fabaceae in the Guaribas Biological Reserve, Paraíba, Brazil

    Directory of Open Access Journals (Sweden)

    Andressa Cavalcante Meireles

    2015-12-01

    Full Text Available Periandra mediterranea (Vell. Taub. has papilionaceous flowers with a complex pollination mechanism. This study examined pollination and reproduction in P. mediterranea from November 2009 to October 2011 at the Guaribas Biological Reserve, Paraíba, Brazil. The petals are modified in a keel that protects the stamens and stigma; two wings surround the keel, and a standard that serves as landing platform for floral visitors. Periandra mediterranea exhibits an explosive type pollination mechanism in which the bee species Xylocopa frontalis, Acanthopus excellens and Epicharis sp., land on the standard and, due to body weight, expose the reproductive organs in the wing-keel complex. As a result, the reproductive organs of the flower come into contact with the dorsal region of the bee body, depositing pollen (i.e., nototríbic pollination. Reproductive assays showed 20% fruiting in spontaneous auto-pollination, 33% in manual auto-pollination, 33% in manual cross-pollination, and 100% in the control group, with no reproductive success while in apomixis. These results demonstrate self-compatibility in this species, however it depends on pollinators to ensure reproductive success.

  15. Rosebud SynCoal Partnership, SynCoal{reg_sign} demonstration technology update

    Energy Technology Data Exchange (ETDEWEB)

    Sheldon, R.W. [Rosebud SynCoal Partnership, Billings, MT (United States)

    1997-12-31

    An Advanced Coal Conversion Process (ACCP) technology being demonstrated in eastern Montana (USA) at the heart of one of the world`s largest coal deposits is providing evidence that the molecular structure of low-rank coals can be altered successfully to produce a unique product for a variety of utility and industrial applications. The product is called SynCoal{reg_sign} and the process has been developed by the Rosebud SynCoal Partnership (RSCP) through the US Department of Energy`s multi-million dollar Clean Coal Technology Program. The ACCP demonstration process uses low-pressure, superheated gases to process coal in vibrating fluidized beds. Two vibratory fluidized processing stages are used to heat and convert the coal. This is followed by a water spray quench and a vibratory fluidized stage to cool the coal. Pneumatic separators remove the solid impurities from the dried coal. There are three major steps to the SynCoal{reg_sign} process: (1) thermal treatment of the coal in an inert atmosphere, (2) inert gas cooling of the hot coal, and (3) removal of ash minerals. When operated continuously, the demonstration plant produces over 1,000 tons per day (up to 300,000 tons per year) of SynCoal{reg_sign} with a 2% moisture content, approximately 11,800b Btu/lb and less than 1.0 pound of SO{sub 2} per million Btu. This product is obtained from Rosebud Mine sub-bituminous coal which starts with 25% moisture, 8,600 Btu/lb and approximately 1.6 pounds of SO{sub 2} per million Btu.

  16. Species Recognition and Clinical Relevance of the Zygomycetous Genus Lichtheimia (syn. Absidia Pro Parte, Mycocladus)

    NARCIS (Netherlands)

    Alastruey-Izquierdo, A.; Hoffmann, K.; de Hoog, G.S.; Rodriguez-Tudela, J.L.; Voigt, K.; Bibashi, E.; Walther, G.

    2010-01-01

    The zygomycete genus Lichtheimia (syn. Absidia pro parte, Mycocladus) consists of saprotrophic fungi inhabiting soil or dead plant material. Lichtheimia corymbifera (syn. Absidia corymbifera, Mycocladus corymbifer) and Lichtheimia ramosa (syn. Absidia ramosa, Mycocladus ramosus) may cause fulminant

  17. Species recognition and clinical relevance of the zygomycetous genus Lichtheimia (syn. Absidia pro parte, Mycocladus)

    NARCIS (Netherlands)

    Alastruey-Izquierdo, A.; Hoffmann, K.; de Hoog, G.S.; Rodriguez-Tudela, J.L.; Voigt, K.; Bibashi, E.; Walther, G.

    2010-01-01

    The zygomycete genus Lichtheimia (syn. Absidia pro parte, Mycocladus) consists of saprotrophic fungi inhabiting soil or dead plant material. Lichtheimia corymbifera (syn. Absidia corymbifera, Mycocladus corymbifer) and Lichtheimia ramosa (syn. Absidia ramosa, Mycocladus ramosus) may cause fulminant

  18. Bioactivity and phytochemical constituents of marine red seaweeds (Jania rubens, Corallina mediterranea and Pterocladia capillacea

    Directory of Open Access Journals (Sweden)

    Soad M. Mohy El-Din

    2016-07-01

    Full Text Available Seaweeds are potential renewable resources in the marine environment. The antibacterial activity of Jania rubens, Corallina mediterranea and Pterocladia capillacea were analyzed against human pathogenic bacteria. The present study was performed to investigate the phytochemical constituents of seaweeds, such as alkaloids, flavonoids, steroids, terpenoids and phlobatannins. In this study, we estimated phenols, flavonoids, tannins, pigments and mineral contents and determined the hydrogen peroxide scavenging activity, reducing power and total antioxidant activity of various extracts of selected seaweeds. Phytochemicals were extracted from the three seaweeds using various solvents, such as methanol, ethanol, acetone and chloroform. Among the various extracts, the methanolic extract was found to have the highest reducing power and total antioxidant capacity. We evaluated the seaweeds against Vibrio fluvialis, and Pterocladia capillacea was the most effective at controlling its growth. The highest zone of inhibition was recorded in the methanol extract. The chemical constituents of the seaweeds were characterized by GC–MS, which showed that they contain organic compounds, such as 1,2-benzenedicarboxylic acid.

  19. [An ultrastructural study of oogenesis in the planarian Schmidtea mediterranea (Platyhelminthe, Paludicola)].

    Science.gov (United States)

    Harrath, Abdul Halim; Alwasal, Saleh H; Alhazza, Ibrahim; Zghal, Fathia; Tekaya, Saida

    2011-07-01

    The ovary of the freshwater planarian Schmidtea mediterranea has been studied for the first time using both light and electron microscopy methods. The ultrastructure of the ovary revealed two types of cells: accessory cells and germinal cells at various stages of differentiation, distributed along a maturation axis. Initially, oogonia underwent cytoplasm growth due to the development of organelles, such as endoplasmic reticulum, Golgi complex, and mitochondria, which are all involved in the production of cytoplasmic inclusions or yolk globules. It is shown that the chromatoid body and fibrogranular aggregates may participate in the synthesis of vitelline inclusions. When completely mature, the oocytes have become larger, due to the accumulation of nutritive inclusions, which are round in shape and have a paracrystalline structure. These inclusions are interpreted as being yolk globules and may represent a kind of nutritive material for the developing embryo. These ultrastructural features of the ovary agree with the available phylogenetic tree, based on morphological and karyological characters that considers Schmidtea group as a genus and not a subgenus. The presence of sperm between the oocytes suggests that fertilization may occur within the ovary, representing an uncommon condition within the Triclads, in which fertilization usually takes places outside of the ovaries. Copyright © 2011 Académie des sciences. Published by Elsevier SAS. All rights reserved.

  20. Selective accumulation of organically bound tritium in the marine unicellular algae Dunaliella bioculata and Acetabularia mediterranea

    International Nuclear Information System (INIS)

    Strack, S.; Kirchmann, R.; Luettke, A.; Bonotto, S.

    1983-01-01

    The marine unicellular algae Dunaliella bioculata and Acetabularia mediterranea have been used to assess the importance of the radioactive contamination by 3 H bound to different organic molecules. We have studied the uptake of 10 different tritiated substances, which are precursors for the cells' main macromolecules: thymidine-methyl- 3 H, adenine-2- 3 H, uridine-5- 3 H, L-leucine-4- 3 H, glycine-2- 3 H, L-arginine-3.4- 3 H, L-aspartic acid-2.3- 3 H, L-phenylalanine-2.3- 3 H, D-glucose-2- 3 H and D-glucose-6- 3 H. Under our experimental conditions, all the tritiated organic molecules are taken up by both algal species. Their intracellular concentration may reach that of the external medium. However, some molecules are selectively accumulated: adenine and leucine in Dunaliella, adenine, arginine and glucose in Acetabularia. Increasing concentrations of adenine and leucine, supplied to the cultures of Dunaliella seem to be without effect on the growth of the algae. (author)

  1. Comparative genomic analysis of multiple strains of two unusual plant pathogens: Pseudomonas corrugata and Pseudomonas mediterranea

    Directory of Open Access Journals (Sweden)

    Emmanouil A Trantas

    2015-08-01

    Full Text Available The non-fluorescent pseudomonads, Pseudomonas corrugata (Pcor and P. mediterranea (Pmed, are closely related species that cause pith necrosis, a disease of tomato that causes severe crop losses. However, they also show strong antagonistic effects against economically important pathogens, demonstrating their potential for utilization as biological control agents. In addition, their metabolic versatility makes them attractive for the production of commercial biomolecules and bioremediation. An extensive comparative genomics study is required to dissect the mechanisms that Pcor and Pmed employ to cause disease, prevent disease caused by other pathogens, and to mine their genomes for commercially significant chemical pathways. Here, we present the draft genomes of nine Pcor and Pmed strains from different geographical locations. This analysis covered significant genetic heterogeneity and allowed in-depth genomic comparison. All examined strains were able to trigger symptoms in tomato plants but not all induced a hypersensitive-like response in Nicotiana benthamiana. Genome-mining revealed the absence of a type III secretion system and of known type III effectors from all examined Pcor and Pmed strains. The lack of a type III secretion system appears to be unique among the plant pathogenic pseudomonads. Several gene clusters coding for type VI secretion system were detected in all genomes.

  2. SynLam(TM) Primary Mirror Evaluation, Phase I

    Data.gov (United States)

    National Aeronautics and Space Administration — Cornerstone Research Group, Inc. (CRG), has developed sandwich core composite material (SynLam(TM)) and related fabrication technology to address the drawbacks of...

  3. Transcriptome analysis of Pseudomonas mediterranea and P. corrugata plant pathogens during accumulation of medium-chain-length PHAs by glycerol bioconversion.

    Science.gov (United States)

    Licciardello, Grazia; Ferraro, Rosario; Russo, Marcella; Strozzi, Francesco; Catara, Antonino F; Bella, Patrizia; Catara, Vittoria

    2017-07-25

    Pseudomonas corrugata and P. mediterranea are soil inhabitant bacteria, generally living as endophytes on symptomless plants and bare soil, but also capable of causing plant diseases. They share a similar genome size and a high proteome similarity. P. corrugata produces many biomolecules which play an important role in bacterial cell survival and fitness. Both species produce different medium-chain-length PHAs (mcl-PHAs) from the bioconversion of glycerol to a transparent film in P. mediterranea and a sticky elastomer in P. corrugata. In this work, using RNA-seq we investigated the transcriptional profiles of both bacteria at the early stationary growth phase with glycerol as the carbon source. Quantitative analysis of P. mediterranea transcripts versus P. corrugata revealed that 1756 genes were differentially expressed. A total of 175 genes were significantly upregulated in P. mediterranea, while 217 were downregulated. The largest group of upregulated genes was related to transport systems and stress response, energy and central metabolism, and carbon metabolism. Expression levels of most genes coding for enzymes related to PHA biosynthesis and central metabolic pathways showed no differences or only slight variations in pyruvate metabolism. The most relevant result was the significantly increased expression in P. mediterranea of genes involved in alginate production, an important exopolysaccharide, which in other Pseudomonas spp. plays a key role as a virulence factor or in stress tolerance and shows many industrial applications. In conclusion, the results provide useful information on the co-production of mcl-PHAs and alginate from glycerol as carbon source by P. mediterranea in the design of new strategies of genetic regulation to improve the yield of bioproducts or bacterial fitness. Copyright © 2016 Elsevier B.V. All rights reserved.

  4. Comparative genomic analysis of multiple strains of two unusual plant pathogens: Pseudomonas corrugata and Pseudomonas mediterranea

    Science.gov (United States)

    Trantas, Emmanouil A.; Licciardello, Grazia; Almeida, Nalvo F.; Witek, Kamil; Strano, Cinzia P.; Duxbury, Zane; Ververidis, Filippos; Goumas, Dimitrios E.; Jones, Jonathan D. G.; Guttman, David S.; Catara, Vittoria; Sarris, Panagiotis F.

    2015-01-01

    The non-fluorescent pseudomonads, Pseudomonas corrugata (Pcor) and P. mediterranea (Pmed), are closely related species that cause pith necrosis, a disease of tomato that causes severe crop losses. However, they also show strong antagonistic effects against economically important pathogens, demonstrating their potential for utilization as biological control agents. In addition, their metabolic versatility makes them attractive for the production of commercial biomolecules and bioremediation. An extensive comparative genomics study is required to dissect the mechanisms that Pcor and Pmed employ to cause disease, prevent disease caused by other pathogens, and to mine their genomes for genes that encode proteins involved in commercially important chemical pathways. Here, we present the draft genomes of nine Pcor and Pmed strains from different geographical locations. This analysis covered significant genetic heterogeneity and allowed in-depth genomic comparison. All examined strains were able to trigger symptoms in tomato plants but not all induced a hypersensitive-like response in Nicotiana benthamiana. Genome-mining revealed the absence of type III secretion system and known type III effector-encoding genes from all examined Pcor and Pmed strains. The lack of a type III secretion system appears to be unique among the plant pathogenic pseudomonads. Several gene clusters coding for type VI secretion system were detected in all genomes. Genome-mining also revealed the presence of gene clusters for biosynthesis of siderophores, polyketides, non-ribosomal peptides, and hydrogen cyanide. A highly conserved quorum sensing system was detected in all strains, although species specific differences were observed. Our study provides the basis for in-depth investigations regarding the molecular mechanisms underlying virulence strategies in the battle between plants and microbes. PMID:26300874

  5. SynUTC - high precision time synchronization over ethernet networks

    CERN Document Server

    Höller, R; Horauer, M; Kerö, N; Schmid, U; Schossmaier, K

    2002-01-01

    This article describes our SynUTC (Synchronized Universal Time Coordinated) technology, which enables high-accuracy distribution of GPS time and time synchronization of network nodes connected via standard Ethernet LANs. By means of exchanging data packets in conjunction with moderate hardware support at nodes and switches, an overall worst-case accuracy in the range of some 100 ns can be achieved, with negligible communication overhead. Our technology thus improves the 1 ms-range accuracy achievable by conventional, software-based approaches like NTP by 4 orders of magnitude. Applications can use the high-accuracy global time provided by SynUTC for event timestamping and event generation both at hardware and software level. SynUTC is based upon inserting highly accurate time information into dedicated data packets at the media-independent interface (MII) between the physical layer transceiver and the network controller upon packet transmission and reception, respectively. As a consequence, every node has acc...

  6. Thevetia neriifolia Juss. ex Steud Syn. J. peruviava (Pers.) Schum ...

    Indian Academy of Sciences (India)

    Thevetia neriifolia Juss. ex Steud Syn. J. peruviava (Pers.) Schum (English: yellow oleander; Hindi: Pili-. Kaner) of Apocynaceae is a small evergreen ornamental tree with strap-like simple leaves and funnel- shaped yellow flowers. Fruit is large with a single hard-shelled seed. Thevetia trees are largely cultivated in gardens ...

  7. Saraca asoca (Roxb.) de Wilde Syn. Saraca indica L. (English ...

    Indian Academy of Sciences (India)

    Saraca asoca (Roxb.) de Wilde Syn. Saraca indica L. (English: Ashoka; Hindi: Asok) ofCaesalpilliaceae is a medium sized extremely ornamental evergreen tree with numerous spreading and drooping branches, compound leaves and orange-yellow flowers in clusters. Fruits are black, leathery pods with compressed seeds.

  8. Syzygium cumini (L.) Skeels Syn. Eugeniajambolana (Hindi-Jamun ...

    Indian Academy of Sciences (India)

    Syzygium cumini (L.) Skeels Syn. Eugeniajambolana (Hindi-Jamun) of Myrtaceae that grows wild and also cultivated, is an elegant tall tree with lush green leathery leaves and white flowers in clusters. The flowers bear numerous stamens. The edible fruits are globose to oblong often single-seeded berries, which are ...

  9. The repertoire of G protein-coupled receptors in the human parasite Schistosoma mansoni and the model organism Schmidtea mediterranea

    Directory of Open Access Journals (Sweden)

    Zamanian Mostafa

    2011-12-01

    Full Text Available Abstract Background G protein-coupled receptors (GPCRs constitute one of the largest groupings of eukaryotic proteins, and represent a particularly lucrative set of pharmaceutical targets. They play an important role in eukaryotic signal transduction and physiology, mediating cellular responses to a diverse range of extracellular stimuli. The phylum Platyhelminthes is of considerable medical and biological importance, housing major pathogens as well as established model organisms. The recent availability of genomic data for the human blood fluke Schistosoma mansoni and the model planarian Schmidtea mediterranea paves the way for the first comprehensive effort to identify and analyze GPCRs in this important phylum. Results Application of a novel transmembrane-oriented approach to receptor mining led to the discovery of 117 S. mansoni GPCRs, representing all of the major families; 105 Rhodopsin, 2 Glutamate, 3 Adhesion, 2 Secretin and 5 Frizzled. Similarly, 418 Rhodopsin, 9 Glutamate, 21 Adhesion, 1 Secretin and 11 Frizzled S. mediterranea receptors were identified. Among these, we report the identification of novel receptor groupings, including a large and highly-diverged Platyhelminth-specific Rhodopsin subfamily, a planarian-specific Adhesion-like family, and atypical Glutamate-like receptors. Phylogenetic analysis was carried out following extensive gene curation. Support vector machines (SVMs were trained and used for ligand-based classification of full-length Rhodopsin GPCRs, complementing phylogenetic and homology-based classification. Conclusions Genome-wide investigation of GPCRs in two platyhelminth genomes reveals an extensive and complex receptor signaling repertoire with many unique features. This work provides important sequence and functional leads for understanding basic flatworm receptor biology, and sheds light on a lucrative set of anthelmintic drug targets.

  10. Structural Design of SynRM Rotor, and the Effect on Power Factor

    DEFF Research Database (Denmark)

    Henriksen, Matthew Lee; Jensen, Bogi Bech; Mijatovic, Nenad

    2015-01-01

    In this paper, structural designs for multiple synchoronous reluctance machine (SynRM) rotor configurations are presented. The rotor flux bridges are increased in thickness until mechanical integrity is achieved, and then the performance of the resulting SynRM is observed. After performing this a...... this analysis for SynRM rotors with different barrier numbers and different flux bridge configurations, this paper concludes with recommendations regarding the mechanical design of SynRM rotors....

  11. One-Pot Catalytic Enantio- and Diastereoselective Syntheses of anti-, syn-cis-Disubstituted, and syn-Vinyl Cyclopropyl Alcohols

    Science.gov (United States)

    Kim, Hun Young; Salvi, Luca; Carroll, Patrick J.; Walsh, Patrick J.

    2009-01-01

    Highly enantio- and diastereoselective methods for the synthesis of a variety of cyclopropyl alcohols are reported. These methods represent the first one-pot approaches to syn-vinyl cyclopropyl alcohols, syn-cis-disubstituted cyclopropyl alcohols, and anti-cyclopropyl alcohols from achiral precursors. The methods begin with enantioselective C–C bond formations promoted by a MIB-based zinc catalyst to generate allylic alkoxide intermediates. The intermediates are then subjected to in situ alkoxide-directed cyclopropanation to provide cyclopropyl alcohols. In the synthesis of vinyl cyclopropyl alcohols, hydroboration of enynes is followed by transmetalation of the resulting dienylborane to zinc to provide dienylzinc reagents. Enantioselective addition to aldehydes generates the requisite dienyl zinc alkoxides, which are then subjected to in situ cyclopropanation to furnish vinyl cyclopropyl alcohols. Cyclopropanation occurs at the double bond allylic to the alkoxide. Using this method, syn-vinylcyclopropyl alcohols are obtained in 65–85% yield, 76–93% ee, and >19:1 dr. To prepare anti-cyclopropanols, enantioselective addition of alkylzinc reagents to conjugated enals provides allylic zinc alkoxides. Because direct cyclopropanation provides syn-cyclopropyl alcohols, the intermediate allylic alkoxides were treated with TMSCl/Et3N to generate intermediate silyl ethers. In situ cyclopropanation of the allylic silyl ether resulted in cyclopropanation to form the anti-cyclopropyl silyl ether. Workup with TBAF affords the anti-cyclopropyl alcohols in one-pot in 60–82% yield, 89–99% ee, and ≥10:1 dr. For the synthesis of cis-disubstituted cyclopropyl alcohols, in situ generated (Z)-vinyl zinc reagents were employed in asymmetric addition to aldehydes to generate (Z)-allylic zinc alkoxides. In situ cyclopropanation provides syn-cis-disubstituted cyclopropyl alcohols in 42–70% yield, 88–97% ee, and >19:1 dr. These one-pot procedures enable the synthesis of a

  12. Porcine synapsin 1: SYN1 gene analysis and functional characterization of the promoter

    DEFF Research Database (Denmark)

    Hedegaard, Claus; Kjaer-Sorensen, Kasper; Madsen, Lone Bruhn

    2013-01-01

    of elements responsible for neuron-specific expression. Expression analysis of SYN1 demonstrated presence of transcript during embryonic development. Analysis of GFP expression in transgenic zebrafish embryos suggests that the pig SYN1 promoter directs expression in neuronal cells. Thus, the SYN1 promoter...

  13. Identification of multiple isomeric core chitobiose-modified high-mannose and paucimannose N-glycans in the planarian Schmidtea mediterranea.

    Science.gov (United States)

    Subramanian, Sabarinath Peruvemba; Babu, Ponnusamy; Palakodeti, Dasaradhi; Subramanian, Ramaswamy

    2018-05-04

    Cell surface-associated glycans mediate many cellular processes, including adhesion, migration, signaling, and extracellular matrix organization. The galactosylation of core fucose (GalFuc epitope) in paucimannose and complex-type N -glycans is characteristic of protostome organisms, including flatworms (planarians). Although uninvestigated, the structures of these glycans may play a role in planarian regeneration. Whole-organism MALDI-MS analysis of N -linked oligosaccharides from the planarian Schmidtea mediterranea revealed the presence of multiple isomeric high-mannose and paucimannose structures with unusual mono-, di-, and polygalactosylated ( n = 3-5) core fucose structures; the latter structures have not been reported in other systems. Di- and trigalactosylated core fucoses were the most dominant glycomers. N -Glycans showed extensive, yet selective, methylation patterns, ranging from non-methylated to polymethylated glycoforms. Although the majority of glycoforms were polymethylated, a small fraction also consisted of non-methylated glycans. Remarkably, monogalactosylated core fucose remained unmethylated, whereas its polygalactosylated forms were methylated, indicating structurally selective methylation. Using database searches, we identified two potential homologs of the Galβ1-4Fuc-synthesizing enzyme from nematodes (GALT-1) that were expressed in the prepharyngeal, pharyngeal, and mesenchymal regions in S. mediterranea. The presence of two GALT-1 homologs suggests different requirements for mono- and polygalactosylation of core fucose for the formation of multiple isomers. Furthermore, we observed variations in core fucose glycosylation patterns in different planarian strains, suggesting evolutionary adaptation in fucose glycosylation. The various core chitobiose modifications and methylations create >60 different glycoforms in S. mediterranea. These results contribute greatly to our understanding of N -glycan biosynthesis and suggest the presence of a

  14. Methylenedioxy- and methoxyflavones from Melicope coodeana syn. Euodia simplex

    DEFF Research Database (Denmark)

    Simonsen, Henrik Toft; Larsen, Michael D; Nielsen, Merete W

    2002-01-01

    Three new natural products, 3,8-dimethoxy-5,7-dihydroxy-3',4'-methylenedioxyflavone, 3,6,8-trimethoxy-5,7-dihydroxy-3',4'-methylenedioxyflavone and 3,6,8,3',4'-pentamethoxy-5,7-dihydroxyflavone were isolated from Melicope coodeana syn. Euodia simplex (Rutaceae) along with 3,6,3'-trimethoxy-5......,7,4'-trihydroxyflavone and 3,3'-dimethoxy-5,7,4'-trihydroxyflavone. The structural assignments are based on (1)H and (13)C NMR data, including discussion of the chemical shifts of C-2 in 3,5-dihydroxy- and 3-methoxy-5-hydroxyflavones. The presence of highly methoxylated and methylenedioxyflavones is characteristic...

  15. Studies on the O-specific polysaccharide of the lipopolysaccharide from the Pseudomonas mediterranea strain C5P1rad1, a bacterium pathogenic of tomato and chrysanthemum.

    Science.gov (United States)

    Zdorovenko, Evelina L; Cimmino, Alessio; Marchi, Guido; Shashkov, Alexander S; Fiori, Mario; Knirel, Yuriy A; Evidente, Antonio

    2017-08-07

    An O-specific polysaccharide (OPS) was isolated from the lipopolysaccharide of Pseudomonas mediterranea strain C5P1rad1, the causal agents of tomato pith necrosis and Chrysanthemum stem rot, and studied by one- and two-dimensional 1 H and 13 C NMR spectroscopy. The following structure of the trisaccharide repeating unit of the OPS was established, which, to our knowledge, is unique among the known bacterial polysaccharide structures: →4)-β-d-ManpNAc3NAcA-(1 → 4)-β-d-ManpNAc3NAcA-(1 → 3)-α-d-QuipNAc4NAc-(1→ where QuiNAc4NAc and ManNAc3NAcA indicate 2,4-diacetamido-2,4,6-trideoxyglucose and 2,3-diacetamido-2,3-dideoxymannuronic acid, respectively. Pre-treatment of leaves with LPS or OPS preparations at 250 and 50 μg mL -1 did not inhibit development of a hypersensitivity reaction induced by P. mediterranea C5P1rad1 on tobacco, tomato and chrysanthemum plants. The same preparations at 250 μg mL -1 partially prevented elicitation of the hypersensitivity reaction by Pseudomonas syringae KVPT7RC on chrysanthemum but not tobacco and tomato. Copyright © 2017. Published by Elsevier Ltd.

  16. SMED-TLX-1 (NR2E1) is critical for tissue and body plan maintenance in Schmidtea mediterranea in fasting/feeding cycles.

    Science.gov (United States)

    Raška, O; Kostrouchová, V; Behenský, F; Yilma, P; Saudek, V; Kostrouch, Z; Kostrouchová, M

    2011-01-01

    Nuclear receptors (NRs), or nuclear hormone receptors (NHRs), are transcription factors that regulate development and metabolism of most if not all animal species. Their regulatory networks include conserved mechanisms that are shared in-between species as well as mechanisms that are restricted to certain phyla or even species. In search for conserved members of the NHR family in Schmidtea mediterranea, we identified a molecular signature of a class of NRs, NR2E1, in the S. mediterranea genome and cloned its complete cDNA coding sequence. The derived amino acid sequence shows a high degree of conservation of both DNA-binding domain and ligand- binding domain and a remarkably high homology to vertebrate NR2E1 and C. elegans NHR-67. Quantitative PCR detected approximately ten-fold higher expression of Smed-tlx-1 in the proximal part of the head compared to the tail region. The expression of Smed-tlx-1 is higher during fed state than during fasting. Smed-tlx-1 down-regulation by RNA interference affects the ability of the animals to maintain body plan and induces defects of brain, eyes and body shape during fasting and re-growing cycles. These results suggest that SMED-TLX-1 is critical for tissue and body plan maintenance in planaria.

  17. SynGAP regulates protein synthesis and homeostatic synaptic plasticity in developing cortical networks.

    Directory of Open Access Journals (Sweden)

    Chih-Chieh Wang

    Full Text Available Disrupting the balance between excitatory and inhibitory neurotransmission in the developing brain has been causally linked with intellectual disability (ID and autism spectrum disorders (ASD. Excitatory synapse strength is regulated in the central nervous system by controlling the number of postsynaptic α-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid receptors (AMPARs. De novo genetic mutations of the synaptic GTPase-activating protein (SynGAP are associated with ID and ASD. SynGAP is enriched at excitatory synapses and genetic suppression of SynGAP increases excitatory synaptic strength. However, exactly how SynGAP acts to maintain synaptic AMPAR content is unclear. We show here that SynGAP limits excitatory synaptic strength, in part, by suppressing protein synthesis in cortical neurons. The data presented here from in vitro, rat and mouse cortical networks, demonstrate that regulation of translation by SynGAP involves ERK, mTOR, and the small GTP-binding protein Rheb. Furthermore, these data show that GluN2B-containing NMDARs and the cognitive kinase CaMKII act upstream of SynGAP and that this signaling cascade is required for proper translation-dependent homeostatic synaptic plasticity of excitatory synapses in developing cortical networks.

  18. xSyn: A Software Tool for Identifying Sophisticated 3-Way Interactions From Cancer Expression Data

    Directory of Open Access Journals (Sweden)

    Baishali Bandyopadhyay

    2017-08-01

    Full Text Available Background: Constructing gene co-expression networks from cancer expression data is important for investigating the genetic mechanisms underlying cancer. However, correlation coefficients or linear regression models are not able to model sophisticated relationships among gene expression profiles. Here, we address the 3-way interaction that 2 genes’ expression levels are clustered in different space locations under the control of a third gene’s expression levels. Results: We present xSyn, a software tool for identifying such 3-way interactions from cancer gene expression data based on an optimization procedure involving the usage of UPGMA (Unweighted Pair Group Method with Arithmetic Mean and synergy. The effectiveness is demonstrated by application to 2 real gene expression data sets. Conclusions: xSyn is a useful tool for decoding the complex relationships among gene expression profiles. xSyn is available at http://www.bdxconsult.com/xSyn.html .

  19. MaxSynBio - Avenues towards creating cells from the bottom up.

    Science.gov (United States)

    Schwille, Petra; Spatz, Joachim; Landfester, Katharina; Bodenschatz, Eberhard; Herminghaus, Stephan; Sourjik, Victor; Erb, Tobias; Bastiaens, Philippe; Lipowsky, Reinhard; Hyman, Anthony; Dabrock, Peter; Baret, Jean-Christophe; Vidakovic-Koch, Tanja; Bieling, Peter; Dimova, Rumiana; Mutschler, Hannes; Robinson, Tom; Tang, Dora; Wegner, Seraphine; Sundmacher, Kai

    2018-05-11

    A large Max Planck-based German research consortium ('MaxSynBio') was formed to investigate living systems from a fundamental perspective. The research program of MaxSynBio relies solely on the bottom-up approach to Synthetic Biology. MaxSynBio focuses on the detailed analysis and understanding of essential processes of life, via their modular reconstitution in minimal synthetic systems. The ultimate goal is to construct a basic living unit entirely from non-living components. The fundamental insights gained from the activities in MaxSynBio can eventually be utilized for establishing a new generation of biotechnological processes, which would be based on synthetic cell constructs that replace natural cells currently used in conventional biotechnology. © 2018 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

  20. Deep functional analysis of synII, a 770 kb synthetic yeast chromosome

    OpenAIRE

    Shen, Yue; Wang, Yun; Chen, Tai; Gao, Feng; Gong, Jianhui; Abramczyk, Dariusz; Walker, Roy; Zhao, Hongcui; Chen, Shihong; Liu, Wei; Luo, Yisha; Müller, Carolin A.; Paul-Dubois-Taine, Adrien; Alver, Bonnie; Stracquadanio, Giovanni

    2017-01-01

    Herein we report the successful design, construction and characterization of a 770 kb synthetic yeast chromosome II (synII). Our study incorporates characterization at multiple levels, including phenomics, transcriptomics, proteomics, chromosome segregation and replication analysis to provide a thorough and comprehensive analysis of a synthetic chromosome. Our “Trans-Omics” analyses reveal a modest but potentially significant pervasive up-regulation of translational machinery observed in synI...

  1. SYN3D: a single-channel, spatial flux synthesis code for diffusion theory calculations

    Energy Technology Data Exchange (ETDEWEB)

    Adams, C. H.

    1976-07-01

    This report is a user's manual for SYN3D, a computer code which uses single-channel, spatial flux synthesis to calculate approximate solutions to two- and three-dimensional, finite-difference, multigroup neutron diffusion theory equations. SYN3D is designed to run in conjunction with any one of several one- and two-dimensional, finite-difference codes (required to generate the synthesis expansion functions) currently being used in the fast reactor community. The report describes the theory and equations, the use of the code, and the implementation on the IBM 370/195 and CDC 7600 of the version of SYN3D available through the Argonne Code Center.

  2. Deep functional analysis of synII, a 770-kilobase synthetic yeast chromosome.

    Science.gov (United States)

    Shen, Yue; Wang, Yun; Chen, Tai; Gao, Feng; Gong, Jianhui; Abramczyk, Dariusz; Walker, Roy; Zhao, Hongcui; Chen, Shihong; Liu, Wei; Luo, Yisha; Müller, Carolin A; Paul-Dubois-Taine, Adrien; Alver, Bonnie; Stracquadanio, Giovanni; Mitchell, Leslie A; Luo, Zhouqing; Fan, Yanqun; Zhou, Baojin; Wen, Bo; Tan, Fengji; Wang, Yujia; Zi, Jin; Xie, Zexiong; Li, Bingzhi; Yang, Kun; Richardson, Sarah M; Jiang, Hui; French, Christopher E; Nieduszynski, Conrad A; Koszul, Romain; Marston, Adele L; Yuan, Yingjin; Wang, Jian; Bader, Joel S; Dai, Junbiao; Boeke, Jef D; Xu, Xun; Cai, Yizhi; Yang, Huanming

    2017-03-10

    Here, we report the successful design, construction, and characterization of a 770-kilobase synthetic yeast chromosome II (synII). Our study incorporates characterization at multiple levels-including phenomics, transcriptomics, proteomics, chromosome segregation, and replication analysis-to provide a thorough and comprehensive analysis of a synthetic chromosome. Our Trans-Omics analyses reveal a modest but potentially relevant pervasive up-regulation of translational machinery observed in synII, mainly caused by the deletion of 13 transfer RNAs. By both complementation assays and SCRaMbLE (synthetic chromosome rearrangement and modification by loxP -mediated evolution), we targeted and debugged the origin of a growth defect at 37°C in glycerol medium, which is related to misregulation of the high-osmolarity glycerol response. Despite the subtle differences, the synII strain shows highly consistent biological processes comparable to the native strain. Copyright © 2017, American Association for the Advancement of Science.

  3. SYN3D: a single-channel, spatial flux synthesis code for diffusion theory calculations

    International Nuclear Information System (INIS)

    Adams, C.H.

    1976-07-01

    This report is a user's manual for SYN3D, a computer code which uses single-channel, spatial flux synthesis to calculate approximate solutions to two- and three-dimensional, finite-difference, multigroup neutron diffusion theory equations. SYN3D is designed to run in conjunction with any one of several one- and two-dimensional, finite-difference codes (required to generate the synthesis expansion functions) currently being used in the fast reactor community. The report describes the theory and equations, the use of the code, and the implementation on the IBM 370/195 and CDC 7600 of the version of SYN3D available through the Argonne Code Center

  4. Deep functional analysis of synII, a 770 kb synthetic yeast chromosome

    Science.gov (United States)

    Gao, Feng; Gong, Jianhui; Abramczyk, Dariusz; Walker, Roy; Zhao, Hongcui; Chen, Shihong; Liu, Wei; Luo, Yisha; Müller, Carolin A.; Paul-Dubois-Taine, Adrien; Alver, Bonnie; Stracquadanio, Giovanni; Mitchell, Leslie A.; Luo, Zhouqing; Fan, Yanqun; Zhou, Baojin; Wen, Bo; Tan, Fengji; Wang, Yujia; Zi, Jin; Xie, Zexiong; Li, Bingzhi; Yang, Kun; Richardson, Sarah M.; Jiang, Hui; French, Christopher E.; Nieduszynski, Conrad A.; Koszul, Romain; Marston, Adele L.; Yuan, Yingjin; Wang, Jian; Bader, Joel S.; Dai, Junbiao; Boeke, Jef D.; Xu, Xun; Cai, Yizhi; Yang, Huanming

    2017-01-01

    Herein we report the successful design, construction and characterization of a 770 kb synthetic yeast chromosome II (synII). Our study incorporates characterization at multiple levels, including phenomics, transcriptomics, proteomics, chromosome segregation and replication analysis to provide a thorough and comprehensive analysis of a synthetic chromosome. Our “Trans-Omics” analyses reveal a modest but potentially significant pervasive up-regulation of translational machinery observed in synII is mainly caused by the deletion of 13 tRNAs. By both complementation assays and SCRaMbLE, we targeted and debuged the origin of a growth defect at 37°C in glycerol medium, which is related to misregulation of the HOG response. Despite the subtle differences, the synII strain shows highly consistent biological processes comparable to the native strain. PMID:28280153

  5. BrisSynBio: a BBSRC/EPSRC-funded Synthetic Biology Research Centre.

    Science.gov (United States)

    Sedgley, Kathleen R; Race, Paul R; Woolfson, Derek N

    2016-06-15

    BrisSynBio is the Bristol-based Biotechnology and Biological Sciences Research Council (BBSRC)/Engineering and Physical Sciences Research Council (EPSRC)-funded Synthetic Biology Research Centre. It is one of six such Centres in the U.K. BrisSynBio's emphasis is on rational and predictive bimolecular modelling, design and engineering in the context of synthetic biology. It trains the next generation of synthetic biologists in these approaches, to facilitate translation of fundamental synthetic biology research to industry and the clinic, and to do this within an innovative and responsible research framework. © 2016 The Author(s).

  6. Detecting SYN flood attacks via statistical monitoring charts: A comparative study

    KAUST Repository

    Bouyeddou, Benamar

    2017-12-14

    Accurate detection of cyber-attacks plays a central role in safeguarding computer networks and information systems. This paper addresses the problem of detecting SYN flood attacks, which are the most popular Denial of Service (DoS) attacks. Here, we compare the detection capacity of three commonly monitoring charts namely, a Shewhart chart, a Cumulative Sum (CUSUM) control chart and exponentially weighted moving average (EWMA) chart, in detecting SYN flood attacks. The comparison study is conducted using the publicly available benchmark datasets: the 1999 DARPA Intrusion Detection Evaluation Datasets.

  7. Evidence that two types of 18S rDNA coexist in the genome of Dugesia (Schmidtea) mediterranea (Platyhelminthes, Turbellaria, Tricladida).

    Science.gov (United States)

    Carranza, S; Giribet, G; Ribera, C; Baguñà; Riutort, M

    1996-07-01

    Sequences of 18S ribosomal DNA (rDNA) are increasingly being used to infer phylogenetic relationships among living taxa. Although the 18S rDNA belongs to a multigene family, all its copies are kept homogeneous by concerted evolution (Dover 1982; Hillis and Dixon 1991). To date, there is only one well-characterized exception to this rule, the protozoan Plasmodium (Gunderson et al. 1987; Waters, Syin, and McCutchan 1989; Qari et al. 1994). Here we report the 1st case of 18S rDNA polymorphism within a metazoan species. Two types (I and II) of 18S rDNA have been found and sequenced in the platyhelminth Dugesia (Schmidtea) mediterranea (Turbellaria, Seriata, Tricladida). Southern blot analysis suggested that both types of rDNA are present in the genome of this flatworm. This was confirmed through sequence comparisons and phylogenetic analysis using the neighbor-joining method and bootstrap test. Although secondary structure analysis suggests that both types are functional, only type I seems to be transcribed to RNA, as demonstrated by Northern blot analysis. The finding of different types of 18S rDNAs in a single genome stresses the need for analyzing a large number of clones whenever 18S sequences obtained by PCR amplification and cloning are being used in phylogenetic reconstruction.

  8. Lawsonia inermis L. Syn. L. alba LamK. (Mehndi or Henna Hindi) of ...

    Indian Academy of Sciences (India)

    Lawsonia inermis L. Syn. L. alba. LamK. (Mehndi or Henna Hindi) of. Lythraceae is a small-sized and much branched tree which is largely cultivated and groomed in the form of hedges. Flowers are white or rose-coloured, fragrant and borne on pyramidal bunches. Fruits bear numerous seeds. Hair dye is prepared from the ...

  9. Effekten af udvidet periodisk syn på person- og varebiler

    DEFF Research Database (Denmark)

    Bernhoft, Inger Marie; Pilegaard, Ninette

    Dette notat har til formål at gennemføre en beregning af costs og benefits af udvidet periodisk syn af person- og varebiler i Danmark, under forudsætning af der gennemføres ét syn af per-son- og varebiler efter fire år, derefter ét syn efter to år og derefter én gang årligt (4,2,1,1…), som...... skulle være efter fire år, derefter efter to år, derefter efter to år igen og derefter årligt (4,2,2,1,1…). Dvs. at der i vores basisscenarie vil være ét ekstra syn (ved 7. år) i forhold til ’Autofore-rapportens’ ba-sis-scenarie. Dog udføres i ’Autofore-rapporten’ også følsomhedsberegninger...

  10. Detecting SYN flood attacks via statistical monitoring charts: A comparative study

    KAUST Repository

    Bouyeddou, Benamar; Harrou, Fouzi; Sun, Ying; Kadri, Benamar

    2017-01-01

    Accurate detection of cyber-attacks plays a central role in safeguarding computer networks and information systems. This paper addresses the problem of detecting SYN flood attacks, which are the most popular Denial of Service (DoS) attacks. Here, we

  11. Excitatory Synaptic Drive and Feedforward Inhibition in the Hippocampal CA3 Circuit Are Regulated by SynCAM 1.

    Science.gov (United States)

    Park, Kellie A; Ribic, Adema; Laage Gaupp, Fabian M; Coman, Daniel; Huang, Yuegao; Dulla, Chris G; Hyder, Fahmeed; Biederer, Thomas

    2016-07-13

    Select adhesion proteins control the development of synapses and modulate their structural and functional properties. Despite these important roles, the extent to which different synapse-organizing mechanisms act across brain regions to establish connectivity and regulate network properties is incompletely understood. Further, their functional roles in different neuronal populations remain to be defined. Here, we applied diffusion tensor imaging (DTI), a modality of magnetic resonance imaging (MRI), to map connectivity changes in knock-out (KO) mice lacking the synaptogenic cell adhesion protein SynCAM 1. This identified reduced fractional anisotropy in the hippocampal CA3 area in absence of SynCAM 1. In agreement, mossy fiber refinement in CA3 was impaired in SynCAM 1 KO mice. Mossy fibers make excitatory inputs onto postsynaptic specializations of CA3 pyramidal neurons termed thorny excrescences and these structures were smaller in the absence of SynCAM 1. However, the most prevalent targets of mossy fibers are GABAergic interneurons and SynCAM 1 loss unexpectedly reduced the number of excitatory terminals onto parvalbumin (PV)-positive interneurons in CA3. SynCAM 1 KO mice additionally exhibited lower postsynaptic GluA1 expression in these PV-positive interneurons. These synaptic imbalances in SynCAM 1 KO mice resulted in CA3 disinhibition, in agreement with reduced feedforward inhibition in this network in the absence of SynCAM 1-dependent excitatory drive onto interneurons. In turn, mice lacking SynCAM 1 were impaired in memory tasks involving CA3. Our results support that SynCAM 1 modulates excitatory mossy fiber inputs onto both interneurons and principal neurons in the hippocampal CA3 area to balance network excitability. This study advances our understanding of synapse-organizing mechanisms on two levels. First, the data support that synaptogenic proteins guide connectivity and can function in distinct brain regions even if they are expressed broadly

  12. SynDIG4/Prrt1 Is Required for Excitatory Synapse Development and Plasticity Underlying Cognitive Function

    Directory of Open Access Journals (Sweden)

    Lucas Matt

    2018-02-01

    Full Text Available Altering AMPA receptor (AMPAR content at synapses is a key mechanism underlying the regulation of synaptic strength during learning and memory. Previous work demonstrated that SynDIG1 (synapse differentiation-induced gene 1 encodes a transmembrane AMPAR-associated protein that regulates excitatory synapse strength and number. Here we show that the related protein SynDIG4 (also known as Prrt1 modifies AMPAR gating properties in a subunit-dependent manner. Young SynDIG4 knockout (KO mice have weaker excitatory synapses, as evaluated by immunocytochemistry and electrophysiology. Adult SynDIG4 KO mice show complete loss of tetanus-induced long-term potentiation (LTP, while mEPSC amplitude is reduced by only 25%. Furthermore, SynDIG4 KO mice exhibit deficits in two independent cognitive assays. Given that SynDIG4 colocalizes with the AMPAR subunit GluA1 at non-synaptic sites, we propose that SynDIG4 maintains a pool of extrasynaptic AMPARs necessary for synapse development and function underlying higher-order cognitive plasticity.

  13. Intracellular Assembly of Cyanophage Syn5 Proceeds through a Scaffold-Containing Procapsid▿ †

    OpenAIRE

    Raytcheva, Desislava A.; Haase-Pettingell, Cameron; Piret, Jacqueline M.; King, Jonathan A.

    2010-01-01

    Syn5 is a marine cyanophage that is propagated on the marine photosynthetic cyanobacterial strain Synechococcus sp. WH8109 under laboratory conditions. Cryoelectron images of this double-stranded DNA (dsDNA) phage reveal an icosahedral capsid with short tail appendages and a single novel hornlike structure at the vertex opposite the tail. Despite the major impact of cyanophages on life in the oceans, there is limited information on cyanophage intracellular assembly processes within their phot...

  14. A first step beyond traditional boundaries: destination therapy with the SynCardia total artificial heart.

    Science.gov (United States)

    Spiliopoulos, Sotirios; Koerfer, Reiner; Tenderich, Gero

    2014-06-01

    The SynCardia total artificial heart is currently used as a bridge to transplantation therapy in cases of irreversible, acute or chronic, biventricular heart failure. We describe the implementation of this technology in the context of destination therapy in a patient with an end-stage heart failure on grounds of primary amyloidosis. © The Author 2014. Published by Oxford University Press on behalf of the European Association for Cardio-Thoracic Surgery. All rights reserved.

  15. Rosebud syncoal partnership SynCoal{sup {reg_sign}} demonstration technology development update

    Energy Technology Data Exchange (ETDEWEB)

    Sheldon, R.W. [Rosebud SynCoal Company, Billings, MT (United States); Heintz, S.J. [Department of Energy, Pittsburgh, PA (United States)

    1995-12-01

    Rosebud SynCoal{reg_sign} Partnership`s Advanced Coal Conversion Process (ACCP) is an advanced thermal coal upgrading process coupled with physical cleaning techniques to upgrade high moisture, low-rank coals to produce a high-quality, low-sulfur fuel. The coal is processed through two vibrating fluidized bed reactors where oxygen functional groups are destroyed removing chemically bound water, carboxyl and carbonyl groups, and volatile sulfur compounds. After thermal upgrading, the SynCoal{reg_sign} is cleaned using a deep-bed stratifier process to effectively separate the pyrite rich ash. The SynCoal{reg_sign} process enhances low-rank western coals with moisture contents ranging from 2555%, sulfur contents between 0.5 and 1.5 %, and heating values between 5,500 and 9,000 Btu/lb. The upgraded stable coal product has moisture contents as low as 1 %, sulfur contents as low as 0.3%, and heating values up to 12,000 Btu/lb.

  16. SynTec Final Technical Report: Synthetic biology for Tailored Enzyme cocktails

    Energy Technology Data Exchange (ETDEWEB)

    Lin, Janine [Novozymes, Inc., Davis, CA (United States); Teter, Sarah [Novozymes, Inc., Davis, CA (United States)

    2016-06-30

    Using a novel enzyme screening method inspired by synthetic biology, Novozymes developed new technology under SynTec which allows for more rapidly tailoring of enzyme cocktails. The methodology can be applied to specific feedstocks, and or coupled to address a specific hydrolytic conversion process context. Using combinatorial high throughput screening of libraries of enzyme domains, we can quickly assess which combination of catalytic modules delivers the best performance for a specific condition. To demonstrate the effectiveness of the screening process, we measured performance of the output catalytic cocktail compared to CTec3/HTec3. SynTec benchmark cocktail - blend of Cellic® CTec3 and HTec3. The test substrate was - ammonia fiber expansion pretreated corn stover (AFEX™ PCS).CTec3/HTec3 was assayed at the optimal pH and temperature, and also in the absence of any pH adjustment. The new enzyme cocktail discovered under SynTec was assayed in the absence of any pH adjustment and at the optimal temperature. Conversion is delivered by SynTec enzyme at significant dose reduction relative to CTec3/HTec3 at the controlled pH optimum, and without titrant required to maintain pH, which delivers additional cost savings relative to current state of the art process. In this 2.5 year $4M project, the team delivered an experimental cocktail that significantly outperformed CTec3/HTec3 for a specific substrate, and for specific hydrolysis conditions. As a means of comparing performance improvement delivered per research dollar spent, we note that SynTec delivered a similar performance improvement to the previous award, in a shorter time and with fewer resources than for the previously successful DOE project DECREASE, a 3.5 year, $25M project, though this project focused on a different substrate and used different hydrolysis conditions. The newly implemented technology for rapid sourcing of new cellulases and hemicellulases from nature is an example of Novozymes

  17. Stereodivergent Synthesis of 1,3-Syn-Polyol Natural Product for Stereochemical-Based Structure Activity Relationship Studies

    Science.gov (United States)

    Zheng, Jiamin

    The 1,3-syn-diol functionality is very common in many natural products. An important class containing this moiety are the 1,3-syn-polyol/pyranone natural products, which have been isolated from a variety of plant sources, and possess biological activities like plant growth inhibition as well as antifeedant, antifungal, antibacterial, and antitumor properties. The feature of this class is a 6-membered lactone where the lactoe oxygen is part of a 1,3-syn-diol motif. To pursue the 1,3-syn-polyol/pyranone natural products, an iterative hydration of polyene strategy was utilized to provide the 1,3- syn-diol functionality, and asymmetric synthetic strategies were explored to form the requisite stereochemistry. The versatility of the asymmetric approach was demonstrated in the synthesis of eupatorium pyranone and also in an ongoing project aimed at the synthesis of SIA7248. As an outgrowth of our work on the total syntheses of 1,3-syn -polyol natural products inspired a stereo-divergent synthesis of 1,3-syn-polyol natural products and their analogs for stereochemical-based structure-activity relationship (SSAR) studies. To identify the key structural factors important for the anticancer activity of the 1,3-syn-polyol/pyranones, a stereo-divergent 16-member library of pyranone/polyol congeners was designed, synthesized and tested with variations in both stereochemistry and numbers of polyol repeat units. Having access to stereochemical isomers of the biologically active natural products allowed us to design experiments that help illustrate their mechanisms of action.

  18. Pearsonema (syn Capillaria plica associated cystitis in a Fennoscandian arctic fox (Vulpes lagopus: a case report

    Directory of Open Access Journals (Sweden)

    Osterman-Lind Eva

    2010-06-01

    Full Text Available Abstract The bladderworm Pearsonema (syn Capillaria plica affects domestic dogs and wild carnivores worldwide. A high prevalence in red foxes (Vulpes vulpes has been reported in many European countries. P. plica inhabits the lower urinary tract and is considered to be of low pathogenic significance in dogs mostly causing asymptomatic infections. However, a higher level of pathogenicity has been reported in foxes. A severe cystitis associated with numerous bladderworms was found in a captive arctic fox (Vulpes lagopus originating from the endangered Fennoscandian arctic fox population. To our knowledge this is the first description of P. plica infection in an arctic fox.

  19. Retrieving SW fluxes from geostationary narrowband radiances for the NASA-CERES SYN1deg product

    Science.gov (United States)

    Wrenn, F. J., IV; Doelling, D. R.; Liang, L.

    2017-12-01

    The CERES mission was designed to measure the natural variability of the net TOA flux over long time scales relevant to climate monitoring. To achieve this goal, CERES provides the level-3 SSF1deg, SYN1deg, and EBAF monthly 1° by 1° regional TOA flux. The single satellite (Terra or Aqua) SSF1deg 24-hour shortwave flux is based on one daytime measurements and assumes constant meteorology to model the diurnal change in albedo. To accurately describe regions with a prominent diurnal signal, the SYN1deg Edition4 dataset employs hourly geostationary (GEO) measurements. This improves upon Edition3, which used 3-hourly GEO measurements and with temporal interpolation. The EBAF product combines the temporal stability of the SSF1deg product with the diurnal information from SYN1deg and removes the CERES instrument calibration bias by constraining the net flux balance to the ocean heat storage term. The SYN-1deg product retrieves hourly SW fluxes from GEO measurements. Over regions with large diurnal cycles, such as maritime stratus and land afternoon convective locations, the GEO derived SW fluxes will capture the diurnal flux not observed with Terra or Aqua sun-synchronous satellites. Obtaining fluxes from geostationary satellite radiance is a multistep process. First, most GEO visible imagers lack calibration and must be calibrated to MODIS and VIIRS. Second, the GEO imager visible channel radiances are converted to broadband radiances using empirical and theoretical models. The lack of coincident, collocated, and co-angled GEO and CERES measurements makes building an empirical model difficult. The narrowband to broadband models are a function of surface and cloud conditions, which are difficult to identify due to the inconsistent cloud retrievals between the 16 GEO imagers used in the CERES record. Third, the GEO derived broadband radiances are passed through the CERES angular distribution model (ADM) to convert the radiances to fluxes. Lastly, the GEO derived

  20. Disruption of hippocampus-regulated behavioural and cognitive processes by heterozygous constitutive deletion of SynGAP.

    Science.gov (United States)

    Muhia, Mary; Yee, Benjamin K; Feldon, Joram; Markopoulos, Foivos; Knuesel, Irene

    2010-02-01

    The brain-specific Ras/Rap-GTPase activating protein (SynGAP) is a prime candidate linking N-methyl-d-aspartate receptors to the regulation of the ERK/MAP kinase signalling cascade, suggested to be essential for experience-dependent synaptic plasticity. Here, we evaluated the behavioural phenotype of SynGAP heterozygous knockout mice (SG(+/-)), expressing roughly half the normal levels of SynGAP. In the cognitive domain, SG(+/-) mice demonstrated severe working and reference memory deficits in the radial arm maze task, a mild impairment early in the transfer test of the water maze task, and a deficiency in spontaneous alternation in an elevated T-maze. In the non-cognitive domain, SG(+/-) mice were hyperactive in the open field and appeared less anxious in the elevated plus maze test. In contrast, object recognition memory performance was not impaired in SG(+/-) mice. The reduction in SynGAP thus resulted in multiple behavioural traits suggestive of aberrant cognitive and non-cognitive processes normally mediated by the hippocampus. Immunohistochemical evaluation further revealed a significant reduction in calbindin-positive interneurons in the hippocampus and doublecortin-positive neurons in the dentate gyrus of adult SG(+/-) mice. Heterozygous constitutive deletion of SynGAP is therefore associated with notable behavioural as well as morphological phenotypes indicative of hippocampal dysfunction. Any suggestion of a possible causal link between them however remains a matter for further investigation.

  1. Astrocyte-specific disruption of SynCAM1 signaling results in ADHD-like behavioral manifestations.

    Directory of Open Access Journals (Sweden)

    Ursula S Sandau

    Full Text Available SynCAM1 is an adhesion molecule involved in synaptic differentiation and organization. SynCAM1 is also expressed in astroglial cells where it mediates astrocyte-to astrocyte and glial-neuronal adhesive communication. In astrocytes, SynCAM1 is functionally linked to erbB4 receptors, which are involved in the control of both neuronal/glial development and mature neuronal and glial function. Here we report that mice carrying a dominant-negative form of SynCAM1 specifically targeted to astrocytes (termed GFAP-DNSynCAM1 mice exhibit disrupted diurnal locomotor activity with enhanced and more frequent episodes of activity than control littermates during the day (when the animals are normally sleeping accompanied by shorter periods of rest. GFAP-DNSynCAM1 mice also display high levels of basal activity in the dark period (the rodent's awake/active time that are attenuated by the psychostimulant D,L-amphetamine, and reduced anxiety levels in response to both avoidable and unavoidable provoking stimuli. These results indicate that disruption of SynCAM1-dependent astroglial function results in behavioral abnormalities similar to those described in animals model of attention-deficit hyperactive disorder (ADHD, and suggest a hitherto unappreciated contribution of glial cells to the pathophysiology of this disorder.

  2. Effects of SYN1Q555X mutation on cortical gray matter microstructure.

    Science.gov (United States)

    Cabana, Jean-François; Gilbert, Guillaume; Létourneau-Guillon, Laurent; Safi, Dima; Rouleau, Isabelle; Cossette, Patrick; Nguyen, Dang Khoa

    2018-04-19

    A new Q555X mutation on the SYN1 gene was recently found in several members of a family segregating dyslexia, epilepsy, and autism spectrum disorder. To describe the effects of this mutation on cortical gray matter microstructure, we performed a surface-based group study using novel diffusion and quantitative multiparametric imaging on 13 SYN1 Q555X mutation carriers and 13 age- and sex-matched controls. Specifically, diffusion kurtosis imaging (DKI) and neurite orientation and dispersion and density imaging (NODDI) were used to analyze multi-shell diffusion data and obtain parametric maps sensitive to tissue structure, while quantitative metrics sensitive to tissue composition (T1, T2* and relative proton density [PD]) were obtained from a multi-echo variable flip angle FLASH acquisition. Results showed significant microstructural alterations in several regions usually involved in oral and written language as well as dyslexia. The most significant changes in these regions were lowered mean diffusivity and increased fractional anisotropy. This study is, to our knowledge, the first to successfully use diffusion imaging and multiparametric mapping to detect cortical anomalies in a group of subjects with a well-defined genotype linked to language impairments, epilepsy and autism spectrum disorder (ASD). © 2018 Wiley Periodicals, Inc.

  3. The synaptic cell adhesion molecule, SynCAM1, mediates astrocyte-to-astrocyte and astrocyte-to-GnRH neuron adhesiveness in the mouse hypothalamus.

    Science.gov (United States)

    Sandau, Ursula S; Mungenast, Alison E; McCarthy, Jack; Biederer, Thomas; Corfas, Gabriel; Ojeda, Sergio R

    2011-06-01

    We previously identified synaptic cell adhesion molecule 1 (SynCAM1) as a component of a genetic network involved in the hypothalamic control of female puberty. Although it is well established that SynCAM1 is a synaptic adhesion molecule, its contribution to hypothalamic function is unknown. Here we show that, in addition to the expected neuronal localization illustrated by its presence in GnRH neurons, SynCAM1 is expressed in hypothalamic astrocytes. Cell adhesion assays indicated that SynCAM is recognized by both GnRH neurons and astrocytes as an adhesive partner and promotes cell-cell adhesiveness via homophilic, extracellular domain-mediated interactions. Alternative splicing of the SynCAM1 primary mRNA transcript yields four mRNAs encoding membrane-spanning SynCAM1 isoforms. Variants 1 and 4 are predicted to be both N and O glycosylated. Hypothalamic astrocytes and GnRH-producing GT1-7 cells express mainly isoform 4 mRNA, and sequential N- and O-deglycosylation of proteins extracted from these cells yields progressively smaller SynCAM1 species, indicating that isoform 4 is the predominant SynCAM1 variant expressed in astrocytes and GT1-7 cells. Neither cell type expresses the products of two other SynCAM genes (SynCAM2 and SynCAM3), suggesting that SynCAM-mediated astrocyte-astrocyte and astrocyte-GnRH neuron adhesiveness is mostly mediated by SynCAM1 homophilic interactions. When erbB4 receptor function is disrupted in astrocytes, via transgenic expression of a dominant-negative erbB4 receptor form, SynCAM1-mediated adhesiveness is severely compromised. Conversely, SynCAM1 adhesive behavior is rapidly, but transiently, enhanced in astrocytes by ligand-dependent activation of erbB4 receptors, suggesting that erbB4-mediated events affecting SynCAM1 function contribute to regulate astrocyte adhesive communication.

  4. U-Pb zircon dating of the Bassies granite (Pyrenees): a syn-tectonic pluton of Westphalian age

    International Nuclear Information System (INIS)

    Paquette, J.L.

    1997-01-01

    A new U-Pb zircon age of 312 ± 2 Ma for the Bassies pluton (Pyrenees) contradicts the previous whole-rock Rb-Sr dating at 276 ± 16 Ma, which was considered as the age of emplacement, therefore regarded as post-tectonic. The new date is in agreement with recent structural studies which suggest a Hercynian syn-tectonic emplacement for the Bassies pluton. These results strengthen the few U-Pb ages already published for the Pyrenean granites and indicate that the Hercynian plutonism of the Pyrenees is essentially Carboniferous in age and syn-tectonic. (authors)

  5. An Analysis of Sawtooth Noise in the Timing SynPaQ III GPS Sensor

    Directory of Open Access Journals (Sweden)

    Yuriy S. SHMALIY

    2007-05-01

    Full Text Available This paper addresses a probabilistic analysis of sawtooth noise in the one pulse per second (1PPS output of the timing SynPaQ III GPS Sensor. We show that sawtooth noise is uniformly distributed within the bounds caused by period of the Local Time Clock of the sensor and that the probability density function (pdf of this noise is formed with 1ns sampling interval used in the sensor to calculate the negative sawtooth. We also show that the pdf has at zero a spike of 1ns width caused by roll-off. It is demonstrated that an unbiased finite impulse response filter is an excellent suppresser of such a noise in the estimates of the time interval errors of local clocks.

  6. SynSysNet: integration of experimental data on synaptic protein-protein interactions with drug-target relations

    NARCIS (Netherlands)

    von Eichborn, J.; Dunkel, M.; Gohlke, B.O.; Preissner, S.C.; Hoffmann, M.F.; Bauer, J.M.J.; Armstrong, J.D.; Schaefer, M.H.; Andrade-Navarro, M.A.; Le Novere, N.; Croning, M.D.R.; Grant, S.G.N.; van Nierop, P.; Smit, A.B.; Preissner, R.

    2013-01-01

    We created SynSysNet, available online at http://bioinformatics.charite.de/ synsysnet, to provide a platform that creates a comprehensive 4D network of synaptic interactions. Neuronal synapses are fundamental structures linking nerve cells in the brain and they are responsible for neuronal

  7. A synthetic cadmium metallothionein gene (PMCd1syn) of Paramecium species: expression, purification and characteristics of metallothionein protein.

    Science.gov (United States)

    Dar, Saira; Shuja, Rukhsana N; Shakoori, Abdul Rauf

    2013-02-01

    Metallothioneins (MTs) are metal binding proteins that are rich in cysteine residues constituting 10-30 % of the total protein, and in which the thiol groups bind to the metal ions. The increasing amount of metal ions in the medium have shown increased production of MTs by different organisms such as bacteria, protozoa and mammals like humans. PMCd1 is the first gene ever discovered in Paramecium, a ciliated protozoan, that could produce this MT in response to cadmium. In this study the PMCd1syn gene has been cloned in pET41a expression vector and expressed in an Escherichia coli BL21-codonplus strain for the first time. Since the gene PMCd1 amplified from Paramecium contained 10 codons, which could act as stop codons during expression in E. coli, this gene of 612 bps was synthesized to substitute these (stop) codons for the Paramecium sp. specific amino acids. For stability of the expressed protein, glutathione-S-transferase gene was fused with PMCd1syn gene and coexpressed. The cells expressing PMCd1syn demonstrated increased accumulation of cadmium. This is the first report of cadmium MT protein expressed from Paramecium species, particularly from synthetic MT gene (PMCd1syn). This fusion protein, the molecular weight of which has been confirmed to be 53.03 kDa with MALDI analysis, is rich in cysteine residues, and has been shown for the first time in this ciliate to bind to and sequester Cd(2+)-ions.

  8. Optimization of cultivation conditions for biotechnological production of lipid by Rhodotorula kratochvilovae (syn, Rhodosporidium kratochvilovae) SY89 for biodiesel preparation

    NARCIS (Netherlands)

    Jiru, Tamene Milkessa; Groenewald, Marizeth; Pohl, Carolina; Steyn, Laurinda; Kiggundu, Nicholas; Abate, Dawit

    Rhodotorula kratochvilovae (syn, Rhodosporidium kratochvilovae) SY89, an oleaginous yeast, isolated from Ethiopian soil, was grown under nitrogen-limited media. The capacity this with respect to biomass production, lipid yield and lipid content was evaluated. The influence of inoculum size, carbon

  9. Nonclinical Safety Assessment of SYN-004: An Oral β-lactamase for the Protection of the Gut Microbiome From Disruption by Biliary-Excreted, Intravenously Administered Antibiotics.

    Science.gov (United States)

    Kokai-Kun, John F; Bristol, J Andrew; Setser, John; Schlosser, Michael

    2016-05-01

    SYN-004 is a first in class, recombinant β-lactamase that degrades β-lactam antibiotics and has been formulated to be administered orally to patients receiving intravenous β-lactam antibiotics including cephalosporins. SYN-004 is intended to degrade unmetabolized antibiotics excreted into the intestines and thus has the potential to protect the gut microbiome from disruption by these antibiotics. Protection of the gut microbiome is expected to protect against opportunistic enteric infections such as Clostridium difficile infection as well as antibiotic-associated diarrhea. In order to demonstrate that oral SYN-004 is safe for human clinical trials, 2 Good Laboratory Practice-compliant toxicity studies were conducted in Beagle dogs. In both studies, SYN-004 was administered orally 3 times per day up to the maximum tolerated dose of the formulation. In the first study, doses of SYN-004 administered over 28 days were safe and well tolerated in dogs with the no-observed-adverse-effect level at the high dose of 57 mg/kg/day. Systemic absorption of SYN-004 was minimal and sporadic and showed no accumulation during the study. In the second study, doses up to 57 mg/kg/day were administered to dogs in combination with an intravenous dose of ceftriaxone (300 mg/kg) given once per day for 14 days. Coadministration of oral SYN-004 with intravenous ceftriaxone was safe and well tolerated, with SYN-004 having no noticeable effect on the plasma pharmacokinetics of ceftriaxone. These preclinical studies demonstrate that SYN-004 is well tolerated and, when coadministered with ceftriaxone, does not interfere with its systemic pharmacokinetics. These data supported advancing SYN-004 into human clinical trials. © The Author(s) 2015.

  10. Development of SYN-004, an oral beta-lactamase treatment to protect the gut microbiome from antibiotic-mediated damage and prevent Clostridium difficile infection.

    Science.gov (United States)

    Kaleko, Michael; Bristol, J Andrew; Hubert, Steven; Parsley, Todd; Widmer, Giovanni; Tzipori, Saul; Subramanian, Poorani; Hasan, Nur; Koski, Perrti; Kokai-Kun, John; Sliman, Joseph; Jones, Annie; Connelly, Sheila

    2016-10-01

    The gut microbiome, composed of the microflora that inhabit the gastrointestinal tract and their genomes, make up a complex ecosystem that can be disrupted by antibiotic use. The ensuing dysbiosis is conducive to the emergence of opportunistic pathogens such as Clostridium difficile. A novel approach to protect the microbiome from antibiotic-mediated dysbiosis is the use of beta-lactamase enzymes to degrade residual antibiotics in the gastrointestinal tract before the microflora are harmed. Here we present the preclinical development and early clinical studies of the beta-lactamase enzymes, P3A, currently referred to as SYN-004, and its precursor, P1A. Both P1A and SYN-004 were designed as orally-delivered, non-systemically available therapeutics for use with intravenous beta-lactam antibiotics. SYN-004 was engineered from P1A, a beta-lactamase isolated from Bacillus licheniformis, to broaden its antibiotic degradation profile. SYN-004 efficiently hydrolyses penicillins and cephalosporins, the most widely used IV beta-lactam antibiotics. In animal studies, SYN-004 degraded ceftriaxone in the GI tract of dogs and protected the microbiome of pigs from ceftriaxone-induced changes. Phase I clinical studies demonstrated SYN-004 safety and tolerability. Phase 2 studies are in progress to assess the utility of SYN-004 for the prevention of antibiotic-associated diarrhea and Clostridium difficile disease. Copyright © 2016 The Authors. Published by Elsevier Ltd.. All rights reserved.

  11. The transporter SynPAM71 is located in the plasma membrane and thylakoids, and mediates manganese tolerance in Synechocystis PCC6803

    DEFF Research Database (Denmark)

    Gandini, Chiara; Schmidt, Sidsel Birkelund; Husted, Søren

    2017-01-01

    symptoms were observed in WT cells exposed to excess Mn. Moreover, CyanoP, which is involved in the early steps of PSII assembly, is massively upregulated in ΔSynPAM71. SynPAM71 was detected in both the plasma membrane and, to a lesser extent, the thylakoid membranes. Our results suggest that SynPAM71......Manganese (Mn) is an essential constituent of photosystem II (PSII) and therefore indispensable for oxygenic photosynthesis. Very little is known about how Mn is transported, delivered and retained in photosynthetic cells. Recently, the thylakoid-localized transporter PAM71 has been linked...... to chloroplast Mn homeostasis in Arabidopsis thaliana. Here, we characterize the function of its homolog in Synechocystis (SynPAM71). We used a loss-of-function line (ΔSynPAM71), wild-type (WT) cells exposed to Mn stress and strains expressing a tagged variant of SynPAM71 to characterize the role of SynPAM71...

  12. SynFace—Speech-Driven Facial Animation for Virtual Speech-Reading Support

    Directory of Open Access Journals (Sweden)

    Giampiero Salvi

    2009-01-01

    Full Text Available This paper describes SynFace, a supportive technology that aims at enhancing audio-based spoken communication in adverse acoustic conditions by providing the missing visual information in the form of an animated talking head. Firstly, we describe the system architecture, consisting of a 3D animated face model controlled from the speech input by a specifically optimised phonetic recogniser. Secondly, we report on speech intelligibility experiments with focus on multilinguality and robustness to audio quality. The system, already available for Swedish, English, and Flemish, was optimised for German and for Swedish wide-band speech quality available in TV, radio, and Internet communication. Lastly, the paper covers experiments with nonverbal motions driven from the speech signal. It is shown that turn-taking gestures can be used to affect the flow of human-human dialogues. We have focused specifically on two categories of cues that may be extracted from the acoustic signal: prominence/emphasis and interactional cues (turn-taking/back-channelling.

  13. Myceliophthora thermophila syn. Sporotrichum thermophile: a thermophilic mould of biotechnological potential.

    Science.gov (United States)

    Singh, Bijender

    2016-01-01

    Myceliophthora thermophila syn. Sporotrichum thermophile is a ubiquitous thermophilic mould with a strong ability to degrade organic matter during optimal growth at 45 °C. Both genome analysis and experimental data have suggested that the mould is capable of hydrolyzing all major polysaccharides found in biomass. The mould is able to secrete a large number of hydrolytic enzymes (cellulases, laccases, xylanases, pectinases, lipases, phytases and some other miscellaneous enzymes) employed in various biotechnological applications. Characterization of the biomass-hydrolyzing activity of wild and recombinant enzymes suggests that this mould is highly efficient in biomass decomposition at both moderate and high temperatures. The native enzymes produced by the mould are more efficient in activity than their mesophilic counterparts beside their low enzyme titers. The mould is able to synthesize various biomolecules, which are used in multifarious applications. Genome sequence data of M. thermophila also supported the physiological data. This review describes the biotechnological potential of thermophilic mould, M. thermophila supported by genomic and experimental evidences.

  14. Rhodium-catalysed syn-carboamination of alkenes via a transient directing group.

    Science.gov (United States)

    Piou, Tiffany; Rovis, Tomislav

    2015-11-05

    Alkenes are the most ubiquitous prochiral functional groups--those that can be converted from achiral to chiral in a single step--that are accessible to synthetic chemists. For this reason, difunctionalization reactions of alkenes (whereby two functional groups are added to the same double bond) are particularly important, as they can be used to produce highly complex molecular architectures. Stereoselective oxidation reactions, including dihydroxylation, aminohydroxylation and halogenation, are well established methods for functionalizing alkenes. However, the intermolecular incorporation of both carbon- and nitrogen-based functionalities stereoselectively across an alkene has not been reported. Here we describe the rhodium-catalysed carboamination of alkenes at the same (syn) face of a double bond, initiated by a carbon-hydrogen activation event that uses enoxyphthalimides as the source of both the carbon and the nitrogen functionalities. The reaction methodology allows for the intermolecular, stereospecific formation of one carbon-carbon and one carbon-nitrogen bond across an alkene, which is, to our knowledge, unprecedented. The reaction design involves the in situ generation of a bidentate directing group and the use of a new cyclopentadienyl ligand to control the reactivity of rhodium. The results provide a new way of synthesizing functionalized alkenes, and should lead to the convergent and stereoselective assembly of amine-containing acyclic molecules.

  15. Physiological characterization of the SynCardia total artificial heart in a mock circulation system.

    Science.gov (United States)

    Crosby, Jessica R; DeCook, Katrina J; Tran, Phat L; Smith, Richard G; Larson, Douglas F; Khalpey, Zain I; Burkhoff, Daniel; Slepian, Marvin J

    2015-01-01

    The SynCardia total artificial heart (TAH) has emerged as an effective, life-saving biventricular replacement system for a wide variety of patients with end-stage heart failure. Although the clinical performance of the TAH is established, modern physiological characterization, in terms of elastance behavior and pressure-volume (PV) characterization has not been defined. Herein, we examine the TAH in terms of elastance using a nonejecting left ventricle, and then characterize the PV relation of the TAH by varying preload and afterload parameters using a Donovan Mock Circulatory System. We demonstrate that the TAH does not operate with time-varying elastance, differing from the human heart. Furthermore, we show that the TAH has a PV relation behavior that also differs from that of the human heart. The TAH does exhibit Starling-like behavior, with output increasing via preload-dependent mechanisms, without reliance on an alteration of inotropic state within the operating window of the TAH. Within our testing range, the TAH is insensitive to variations in afterload; however, this insensitivity has a limit, the limit being the maximum driving pressure of the pneumatic driver. Understanding the physiology of the TAH affords insight into the functional parameters that govern artificial heart behavior providing perspective on differences compared with the human heart.

  16. A Spore Counting Method and Cell Culture Model for Chlorine Disinfection Studies of Encephalitozoon syn. Septata intestinalis

    OpenAIRE

    Wolk, D. M.; Johnson, C. H.; Rice, E. W.; Marshall, M. M.; Grahn, K. F.; Plummer, C. B.; Sterling, C. R.

    2000-01-01

    The microsporidia have recently been recognized as a group of pathogens that have potential for waterborne transmission; however, little is known about the effects of routine disinfection on microsporidian spore viability. In this study, in vitro growth of Encephalitozoon syn. Septata intestinalis, a microsporidium found in the human gut, was used as a model to assess the effect of chlorine on the infectivity and viability of microsporidian spores. Spore inoculum concentrations were determine...

  17. Geological Mapping and Investigation into a Proposed Syn-rift Alluvial Fan Deposit in the Kerpini Fault Block, Greece.

    OpenAIRE

    Hadland, Sindre

    2016-01-01

    Master's thesis in Petroleum geosciences engineering The Kerpini Fault Block is located in the southern part of the Gulf of Corinth rift system. The rift system consists of several east-west orientated half-grabens with associated syn-rift sediments. Kerpini Fault Block is one of the southernmost half-grabens within the rift systems, and is composed of several different stratigraphic units. The stratigraphic framework consists of a complex interaction of several stratigraphic units. One of...

  18. Implantation technique of the 50-cm3 SynCardia Total Artificial Heart: does size make a difference?

    Science.gov (United States)

    Spiliopoulos, Sotirios; Guersoy, Dilek; Dimitriou, Alexandros Merkourios; Koerfer, Reiner; Tenderich, Gero

    2015-01-01

    Despite downsizing, implantation technique of the 50-cm(3) SynCardia Total Artificial Heart and settings of the Companion driver remain unchanged. Owing to the absence of de-airing nipples, de-airing procedure is even more crucial and has to be performed carefully. © The Author 2015. Published by Oxford University Press on behalf of the European Association for Cardio-Thoracic Surgery. All rights reserved.

  19. Synergistic Exploitation of Hyper- and Multi-Spectral Precursor Sentinel Measurements to Determine Phytoplankton Functional Types (SynSenPFT

    Directory of Open Access Journals (Sweden)

    Svetlana N. Losa

    2017-07-01

    Full Text Available We derive the chlorophyll a concentration (Chla for three main phytoplankton functional types (PFTs – diatoms, coccolithophores and cyanobacteria – by combining satellite multispectral-based information, being of a high spatial and temporal resolution, with retrievals based on high resolution of PFT absorption properties derived from hyperspectral satellite measurements. The multispectral-based PFT Chla retrievals are based on a revised version of the empirical OC-PFT algorithm applied to the Ocean Color Climate Change Initiative (OC-CCI total Chla product. The PhytoDOAS analytical algorithm is used with some modifications to derive PFT Chla from SCIAMACHY hyperspectral measurements. To combine synergistically these two PFT products (OC-PFT and PhytoDOAS, an optimal interpolation is performed for each PFT in every OC-PFT sub-pixel within a PhytoDOAS pixel, given its Chla and its a priori error statistics. The synergistic product (SynSenPFT is presented for the period of August 2002 March 2012 and evaluated against PFT Chla data obtained from in situ marker pigment data and the NASA Ocean Biogeochemical Model simulations and satellite information on phytoplankton size. The most challenging aspects of the SynSenPFT algorithm implementation are discussed. Perspectives on SynSenPFT product improvements and prolongation of the time series over the next decades by adaptation to Sentinel multi- and hyperspectral instruments are highlighted.

  20. Calculations of kinetic isotope effects in the syn-eliminations of (2-phenylethyl)dimethylamine oxides

    International Nuclear Information System (INIS)

    Shafiei-Kermani, H.R.

    1987-01-01

    Transition state theory (TST) calculations of kinetic isotope effects (KIE) for the syn-elimination of (2-phenylethyl)dimethylamine oxides have been carried out for a series of transition state (TS) models encompassing both E1-like and E1cB-like regions of the E2 mechanistic spectrum. A large number of different reaction coordinates were explored for both unsolvated and for coordination of solvent dimethylsulfoxide in the cyclic transition state models. The models of reaction for both solvated and unsolvated models of proton transfer are presented. A simplified method for easier initial screening of reaction coordinate contributions is developed, discussed, and found to produce accurate approximations to the full model KIE values. Both unsolvated and solvated models show E1-like E2 mechanism and the calculated values from both models are in extremely good agreement with experimentally measured KIE. Both models were used to investigate para-substituted derivatives (Z = CL, OCH 3 ) of the parent compound (Z = H). The transition states are related by a shift in structure parallel to the central E2 diagonal of an O'Ferrall-Jencks-Fry reaction diagram, as predicted by Thornton, indicating that in the absence of other factors, the extent to which negative charge is accumulated at C/sub β/ in the transition state is a function primarily of the leaving group. All of the structural parameters such as bond distances and bond angles were related to independent bond orders. Beta-deuterium isotope effects produced by both solvated and nonsolvated models are temperature dependent

  1. Base Pair Opening in a Deoxynucleotide Duplex Containing a cis-syn Thymine Cyclobutane Dimer Lesion

    Science.gov (United States)

    Wenke, Belinda B.; Huiting, Leah N.; Frankel, Elisa B.; Lane, Benjamin F.; Núñez, Megan E.

    2014-01-01

    The cis-syn thymine cyclobutane dimer is a DNA photoproduct implicated in skin cancer. We compared the stability of individual base pairs in thymine dimer-containing duplexes to undamaged parent 10-mer duplexes. UV melting thermodynamic measurements, CD spectroscopy, and 2D NOESY NMR spectroscopy confirm that the thymine dimer lesion is locally and moderately destabilizing within an overall B-form duplex conformation. We measured the rates of exchange of individual imino protons by NMR using magnetization transfer from water and determined the equilibrium constant for the opening of each base pair Kop. In the normal duplex Kop decreases from the frayed ends of the duplex toward the center, such that the central TA pair is the most stable with a Kop of 8×10−7. In contrast, base pair opening at the 5’T of the thymine dimer is facile. The 5’T of the dimer has the largest equilibrium constant (Kop =3×10−4) in its duplex, considerably larger than even the frayed penultimate base pairs. Notably, base pairing by the 3’T of the dimer is much more stable than by the 5’T, indicating that the predominant opening mechanism for the thymine dimer lesion is not likely to be flipping out into solution as a single unit. The dimer asymmetrically affects the stability of the duplex in its vicinity, destabilizing base pairing on its 5’ side more than on the 3’ side. The striking differences in base pair opening between parent and dimer duplexes occur independently of the duplex-single strand melting transitions. PMID:24328089

  2. Experience with the SynCardia total artificial heart in a Canadian centre.

    Science.gov (United States)

    Nguyen, Anthony; Pellerin, Michel; Perrault, Louis P; White, Michel; Ducharme, Anique; Racine, Normand; Carrier, Michel

    2017-12-01

    The SynCardia total artificial heart (TAH) provides complete circulatory support by replacing both native ventricles. Accepted indications include bridge to transplantation and destination therapy. We review our experience with TAH implantation during a period when axial flow pump became available. We retrospectively analyzed the demographics, clinical characteristics and survival of all patients receiving the TAH. From September 2004 to November 2016, 13 patients (12 men, mean age 45 ± 13 yr) received the TAH for refractory cardiogenic shock secondary to idiopathic (56%) or ischemic (17%) cardiomyopathy and to other various causes (33%). Before implantation, mean ejection fraction was 14% ± 4%, 7 (54%) patients had previous cardiac surgery, 4 (31%) were on mechanical ventilation, and 3 (23%) patients were on dialysis. The mean duration of TAH support was 46 ± 40 days. Three (23%) patients died while on support after a mean of 15 days. Actuarial survival on support was 77% ± 12% at 30 days after implantation. Complications on support included stroke ( n = 1, 8%), acute respiratory distress syndrome requiring prolonged intubation ( n = 5, 38%) and acute renal failure requiring temporary dialysis ( n = 5, 38%). Ten (77%) patients survived to be transplanted after a mean of 52 ± 42 days of support. Actuarial survival rates after transplant were 67% ± 16% at 1 month and 56% ± 17% at 1 year after transplantation. The TAH provides an alternative with low incidence of neurologic events in extremely fragile and complex patients waiting for heart transplantation. Complex and unusual anatomic conditions explained the current use of TAH.

  3. SYN-RIFT SANDSTONЕS: THE FEATURES OF BULK CHEMICAL COMPOSITIONS, AND POSITIONS ON PALEOGEODYNAMIC DISCRIMINANT DIAGRAMS

    Directory of Open Access Journals (Sweden)

    A. V. Maslov

    2018-01-01

    Full Text Available From the early 1980s, the data on the bulk chemical composition of sandstones and mudstones are actively involved for interpretation of the paleogeodynamic settings for sedimentary sequences. Discriminant diagrams such as K2O/Na2O–SiO2/Al2O3 [Maynard et al., 1982], (Fe2O3*+MgO–K2O/Na2O and others [Bhatia, 1983], SiO2–K2O/Na2O [Roser, Korsch, 1986], (K2O+Na2O–SiO2/20–(TiO2+Fe2O3+MgO [Kroonenberg, 1994] etc., are now widely used in regional investigations to classify terrigenous rocks from several paleogeodynamic settings (passive and active continental margins, oceanic and continental volcanic arcs etc. with a certain ‘percentage of consistency’. The first diagrams DF1–DF2 for syn-rift compositions were published in the early 2010s [Verma, Armstrong-Altrin, 2013]. This article analyzes the bulk chemical compositions of syn-rift sandstones from intracratonic rifts and rifts formed during the break-up of the Columbia and Gondwana supercontinents, rifts within volcanic arcs and related to the collapse of collision orogens (for example, Permian sandstones of the Malužiná formation, Western Carpathians, Slovakia. Our database includes the Neoproterozoic Uinta Mountain Group (USA, the Cretaceous Omdurman formation of the Khartoum Basin (Sudan, the siliciclastic deposits of the Kalahari Basin (East African rift zone, the sandstones of the Vindhyan Supergroup (India, the Neoproterozoic Ui Group of the Uchur-Maya region (Southeast Siberia, the Meso-Neoproterozoic Banxi Group (Southern China, the Mesoproterozoic Belt-Purcell Supergroup (USA, the Oronto and Bayfield Groups of the Midcontinent (USA, as well as the sandstones of the Upper Precambrian Ai and Mashak formations, and the metasedimentary rocks of the Arsha Group (Southern Urals. The article examines: (1 the position of the syn-rift sandstone compositions (fields on the log(SiO2/Al2O3–log(Na2O/K2O classification diagram and the F1–F2 diagram, which gives the possible

  4. Syn-collisional felsic magmatism and continental crust growth: A case study from the North Qilian Orogenic Belt at the northern margin of the Tibetan Plateau

    Science.gov (United States)

    Chen, Shuo; Niu, Yaoling; Xue, Qiqi

    2018-05-01

    The abundant syn-collisional granitoids produced and preserved at the northern Tibetan Plateau margin provide a prime case for studying the felsic magmatism as well as continental crust growth in response to continental collision. Here we present the results from a systematic study of the syn-collisional granitoids and their mafic magmatic enclaves (MMEs) in the Laohushan (LHS) and Machangshan (MCS) plutons from the North Qilian Orogenic Belt (NQOB). Two types of MMEs from the LHS pluton exhibit identical crystallization age ( 430 Ma) and bulk-rock isotopic compositions to their host granitoids, indicating their genetic link. The phase equilibrium constraints and pressure estimates for amphiboles from the LHS pluton together with the whole rock data suggest that the two types of MMEs represent two evolution products of the same hydrous andesitic magmas. In combination with the data on NQOB syn-collisional granitoids elsewhere, we suggest that the syn-collisional granitoids in the NQOB are material evidence of melting of ocean crust and sediment. The remarkable compositional similarity between the LHS granitoids and the model bulk continental crust in terms of major elements, trace elements, and some key element ratios indicates that the syn-collisional magmatism in the NQOB contributes to net continental crust growth, and that the way of continental crust growth in the Phanerozoic through syn-collisional felsic magmatism (production and preservation) is a straightforward process without the need of petrologically and physically complex processes.

  5. 3D imaging of vesicles in hyaloclastic fragments - clues to syn-eruptive shear conditions

    Science.gov (United States)

    Helo, C.; Flaws, A.; Hess, K.; Franz, A.; Clague, D. A.; Dingwell, D. B.

    2011-12-01

    3D imaging of stretched vesicles in hyaloclastic fragments has been used to investigate the shear environment of mild pyroclastic eruptions at mid-ocean ridges. X-ray computed tomography offers an attractive non-invasive method to investigate geomaterials at a high resolution for the geometry of the different phases. In this study, we have imaged vesicles within two types of basaltic glass fragments. Stretched, ellipsoid-shaped vesicles in thin limu o Pele and tubular vesicles in a pumiceous fragment. Both types originate from pyroclastic activity on Axial Seamount, Juan de Fuca ridge. Rapid quenching of the glass has prevented extensive bubble relaxation and information about syn-eruptive shear and differential stress conditions is stored, as the dimensions of a stretched bubble directly relates to the extent and mode of shearing. The X-ray tomography data was processed using a set of codes based on edge detection and ellipsoid fitting to acquire quantitative information on the shape of the stretched vesicles. Preliminary results demonstrate, that the geometry of the stretched vesicles, e.g., the elongation of the vesicle with respect to the calculated undeformed radius, is in accordance with simple shear scenarios. Stored differential stress ranges from 5 kPa to 90 kPa with shear rates between 3.2x102 s-1 and 5.7x3 s-1 within a single limu o Pele fragment. This range may be explained by either variable time available for relaxation as the cooling front proceeds through the fragment, complex interplay in space and time between fragmentation and quenching, bubble clusters mutually inhibiting each others extend of deformation, or any combination of these. Bubble relaxation time scales are less then 0.005 s providing constraints on the timeframe for cooling to the glass transition. Qualitative analyses of the tube pumice indicates that the tubular structures grow in length by coalescence of vertically aligned ellipsoid-shaped vesicles, and in width by coalescence of

  6. Syn-sedimentary tectonics and facies analysis in a rift setting: Cretaceous Dalmiapuram Formation, Cauvery Basin, SE India

    Directory of Open Access Journals (Sweden)

    Nivedita Chakraborty

    2018-04-01

    Full Text Available The Cretaceous (Albian–Cenomanian Dalmiapuram Formation is one of the economically significant constituents in the hydrocarbon-producing Cauvery rift basin, SE India that opened up during the Late Jurassic–Early Cretaceous Gondwanaland fragmentation. The fossil-rich Dalmiapuram Formation, exposed at Ariyalur within the Pondicherry sub-basin of Cauvery Basin, rests in most places directly on the Archean basement and locally on the Lower Cretaceous (Barremian–Aptian Basal Siliciclastic Formation. In the Dalmiapuram Formation, a facies association of tectonically-disturbed phase is sandwiched between two drastically quieter phases. The early syn-rift facies association (FA 1, records the first carbonate marine transgression within the basin, comprising a bar–lagoon system with occasionally storms affecting along the shore and a sheet-like non-recurrent biomicritic limestone bed on the shallow shelf that laterally grades into pyrite–glauconite-bearing dark-colored shale in the deeper shelf. Spectacular breccias together with varied kinds of mass-flow products comprise the syn-rift facies association (FA 2. While the breccias occur at the basin margin area, the latter extend in the deeper inland sea. Clast composition of the coarse clastics includes large, even block-sized limestone fragments and small fragments of granite and sandstone from the basement. Marl beds of quieter intervals between tectonic pulses occur in alternation with them. Faulted basal contact of the formation, and small grabens filled by multiple mass-flow packages bear the clear signature of the syntectonic activity localized contortions, slump folds, and pillow beds associated with mega slump/slide planes and joints, which corroborates this contention further. This phase of tectonic intervention is followed by another relatively quieter phase and accommodates the late syn-rift facies association (FA 3. A tidal bar–interbar shelf depositional system allowed a

  7. JOINTS AND SYN-SEDIMENTARY FAULTS NETWORKS IN MARINE CLAYS AND MUDSTONES. Importance for Radwaste storage

    Science.gov (United States)

    Arnould, M.

    2009-12-01

    There is a number of marine clays, mudstones, marls, 100 to 200 m thick, showing smectites, mixed layers illite/smectite, with a small percentage of organic matter and sulphides with a variable clay, silt, and carbonate content. I published (Arnould , 2006) examples from Lower Cambrian to Miocene in age and from the Baltic shore to Spain in Europe. Observations were made mostly in quarries and pits down to more than 40 m and in underground research laboratories (URL). Only visible on fresh cuts amongst a variety of fissures there is always a network of joints. Schematically one family is the bedding (horizontal) the two others are normal to the bedding and orthogonal between them. The orientations of vertical joints are different from the orientations of pits and quarries’s walls. The networks are intrinsic. It was first well described by Skempton & al (1969) in Eocene London Clay. Joints are matt in texture, clean, without filling or cement. The order of magnitude of their linear dimensions is decimeter to meter. It is necessary to start from the original sediment: mud. Deposited in flakes mud has a bee’s nest microscopic structure. Each nest is full of water. Hence mud may have a water content up to 300%, reported to its dry weight. Paradoxically mud is impervious. As proposed by Cosgrove (2001) progressive but discontinuous hydraulic fracturing could be the origin of vertical joints, with drainage upwards and compaction of the sediment. Geological observations show that ioints are formed during the sedimentation process. There is also a world literature concluding at the necessary early fracturing of mudstones and marls hosts of sand dykes. Very few faults are identified in field observations and on exploration logs. But it is obvious that drainage and compaction of mud over thousands square kilometers induced differential settlements with many syn-sedimentary non tectonic faults constituting another discontinuity network. These faults inside the same

  8. Salt flow direction and velocity during subsalt normal faulting and syn-kinematic sedimentation—implications from analytical calculations

    Science.gov (United States)

    Warsitzka, M.; Kukowski, N.; Kley, J.

    2018-04-01

    Salt flow induced by subsalt normal faulting is mainly controlled by tilting of the salt layer, the amount of differential loading due to syn-kinematic deposition, and tectonic shearing at the top or the base of the salt layer. Our study addresses the first two mechanisms and aims to examine salt flow patterns above a continuously moving subsalt normal fault and beneath a syn-kinematic minibasin. In such a setting, salt either tends to flow down towards the basin centre driven by its own weight or is squeezed up towards the footwall side owing to loading differences between the minibasin and the region above the footwall block. Applying isostatic balancing in analytical models, we calculated the steady-state flow velocity in a salt layer. This procedure gives insights into (1) the minimum vertical offset required for upward flow to occur, (2) the magnitude of the flow velocity, and (3) the average density of the supra-salt cover layer at the point at which upward flow starts. In a sensitivity study, we examined how the point of flow reversal and the velocity patterns are influenced by changes of the salt and cover layer thickness, the geometry of the cover flexure, the dip of the subsalt fault, compaction parameters of the supra-salt cover, the salt viscosity and the salt density. Our model results reveal that in most geological scenarios, salt flow above a continuously displacing subsalt normal fault goes through an early phase of downward flow. At sufficiently high fault offset in the range of 700-2600 m, salt is later squeezed upward towards the footwall side. This flow reversal occurs at smaller vertical fault displacement, if the thickness of the pre-kinematic layer is larger, the sedimentation rate of the syn-kinematic cover is higher, the compaction coefficient of cover sediments (i.e. the density increase with depth) is larger or the average density of the salt is lower. Other geometrical parameters such as the width of the cover monocline, the dip of the

  9. The Uses of Copper and Zinc Aluminates to Capture and Convert Carbon dioxide to Syn-gas at Higher Temperature

    Directory of Open Access Journals (Sweden)

    R.Y. Raskar

    2014-03-01

    Full Text Available The uses of copper and zinc aluminates to capture and convert the CO2 to syn-gas were studied at higher temperatures. The samples of copper and zinc aluminates were prepared by solid-solid fusion method by calcining in air at 900 oC for 3 h. Those samples were characterized by acidity/alkalinity, surface area, XRD pattern, IR, SEM images and screening to capture CO2 at the different temperatures. The phases Cu2O, CuO, ZnO, CuAl2O4 and ZnAl2O4 were found to be in the samples of zinc and copper aluminates. Acidity and surface area of the samples of copper and zinc aluminates were found to be in the ranges from 0.063 to 9.37 mmol g-1 and 3.04 to 11.8 m2 g-1, respectively. The captured CO2 by the samples of copper and zinc aluminates was found to be 19.92 to 31.52 wt% for the temperature range 40 to 850 oC. The captured CO2 at 550 oC by variable Zn/Al and Cu/Al mol ratio from 0.5 to 6 of the samples of copper and zinc aluminates was found to be 12.81 to 18.04 wt%. The reduction of carbon dioxide by zinc and copper aluminates was observed. The conversion of CO2 by methane over variable mol ratio of Cu/Al and Zn/Al in copper and zinc aluminates, respectively, at 500 oC showed the production of syn-gas by using the gas hourly space velocities (GHSV 12000, 12000 and 6000 ml. h-1. g-1 of helium, CO2 and methane. The conversions of CO2 by methane over the samples of zinc and copper aluminates were studied at different mol ratios of CO2 to methane.  © 2014 BCREC UNDIP. All rights reservedReceived: 13rd May 2013; Revised: 8th November 2013; Accepted: 8th November 2013[How to Cite: Raskar, R.Y., Gaikwad, A.G. (2014. The Uses of Copper and Zinc Aluminates to Cap-ture and Convert Carbon Dioxide to Syn-gas at Higher Temperature. Bulletin of Chemical Reaction Engineering & Catalysis, 9 (1: 1-15. (doi:10.9767/bcrec.9.1.4899.1-15[Permalink/DOI: http://dx.doi.org/10.9767/bcrec.9.1.4899.1-15

  10. Death Valley turtlebacks: Mesozoic contractional structures overprinted by Cenozoic extension and metamorphism beneath syn-extensional plutons

    Science.gov (United States)

    Pavlis, T. L.; Miller, M.; Serpa, L.

    2008-07-01

    The term turtleback was first coined to describe the curvilinear fault surfaces that produced a distinctive geomorphic form in the Black Mountains east of Death Valley, and although it was decades before their full significance was appreciated, they remain one of the most distinctive features of the extensional structure of the Death Valley region. Historically the interpretation of the features has varied markedly, and misconceptions about their character continue to abound, including descriptions in popular field guides for the area. It the 1990's, however, the full history of the systems began to be apparent from several key data: 1) the dating of the plutonic assemblage associated with the turtlebacks demonstrated that late Miocene, syn-extensional plutonism was fundamental to their formation; 2) the plutonic assemblage forms an intrusive sheet structurally above the turtlebacks, indicating a tie between much of the high grade metamorphism and Cenozoic plutonism; 3) a modern analog for the syn-extensional plutonism in the Black Mountains was recognized beneath Death Valley with the imaging of a mid-crustal magma body; 4) the Neogene structural history was worked out in the turtlebacks showing that folding of early-formed shear zones formed the turtleback anticlinoria but overprinting by brittle faults produced the final form as they cut obliquely across the older structure; and 5) the pre-extensional structural history was clarified, demonstrating that Mesozoic basement-involved thrust systems are present within the turtlebacks, but have been overprinted by the extensional system. An unresolved issue is the significance of Eocene U-Pb dates for pegmatites within the region, but presumably these relate somehow to the pre-extensional history. Miller and Pavlis (2005; E. Sci. Rev.) reviewed many features of the turtlebacks, and our working model for the region is that the turtlebacks originated as mid-crustal ductile-thrust systems within the Cordilleran fold

  11. Geological Study of Active Cold Seeps in the Syn-collision Accretionary Prism Kaoping Slope off SW Taiwan

    Directory of Open Access Journals (Sweden)

    Chi-Yue Huang

    2006-01-01

    Full Text Available Pogonophoran tube worms, elongated pyrite tubes and authigenic carbonate nodules are used to evaluate the occurrence of potential cold seeps in the syn-collision accretionary prism Kaoping Slope off SW Taiwan. At least two species of pogonophoran tubeworms were found in surface and core sediments. Pyrites occur in three different forms: fillings inside foraminiferal chambers, cements between calcareous microfossils, and elongated tubes. The bottom water off SW Taiwan is aerobic, but authigenic pyrites are found in the surface sediments at several sites, suggesting the existence of local reducing environments enabling the formation of pyrites. These environments are most likely caused by the occurrence of active cold seeps where methane expulses. Authigenic carbonates with highly depleted carbon isotope values (-54 to -43‰ were found at more than 5 locations, in agreement with a methane-derived source for the carbon.

  12. Motivation : En studie om lärares och elevers syn på motivation i skolan

    OpenAIRE

    Sundström, Jenny; Wiman, Malin

    2009-01-01

    I vårt examensarbete undersöker vi olika typer av motivation. Vårt syfte med arbetet var att undersöka lärares syn motivation samt elevers egen motivation i skolan. De frågeställningar vi utgick från var: 1. Vilken typ av motivation har elever i år 4 och år 5? 2. Finns det någon skillnad mellan pojkars och flickors motivation? 3. Vilken typ av motivation strävar lärare efter att elever ska erhålla och använda sig av? 4. Hur ser lärare på intrinsic (inre) motivation, extrinsic (yttre) motivati...

  13. The effect of tectonic evolution on lacustrine syn-rift sediment patters in Qikou Sag, Bohaiwan Basin, eastern China

    Science.gov (United States)

    Liao, Y.; Wang, H.; Xu, W.

    2013-12-01

    Normal fault arrays and associated relay ramps between two overlapping en-echelon normal faults are well known to control the deposition and distribution of sediments in alluvial, fluvial and deltaic systems in rift settings. The influence of transfer zones or relay ramps on sediment routes and dispersal patterns in subaqueous (deeper marine/lacustrine), however, is barely studied and hence less clear. Previous experimental studies indicate that subaqueous relay ramps may act as sediment transportation pathways if certain conditions are available. In this study, we integrate detailed structural and stratigraphic analysis with three-dimensional seismic data and limited well log data from the Qikou Sag to examine the tectonic evolution and the syn-rift sediment patterns response to fault growth and linkage in an active rift setting. Qikou Sag is located at the center of Huanghua Depression, Bohaiwan Basin of eastern China. Structurally, it is a typical continental rift basin characterized by a linked system of two NEE-SWW-striking half-grabens and one E-W-striking graben. Qikou sag is filled with Eocene-Oligocene syn-rift sediments and Miocene to Quaternary post-rift sediments. The Eocene-Oligocene rifting stage can be divided into early rifting period (43-36.5 Ma, the third member and second member of Shahejie Formation, Es3 and Es2), stable rifting period (36.5-29Ma, the first member of Shaehejie Formation, Es1) and fault-depressed diversionary period (29-24.6Ma, the Dongying Formation, Ed). This study focus on the early syn-rift, the third and second member of Shehejie Formation, which is mostly dark-grey mudstone interbedded with fine to coarse-grained sandstone deposited by large-scale turbidity currents in deep-lake. In particular, we use a combination of thickness variability and facies distributions, onlap patterns within a high-resolution sequence stratigraphic framework, integrated with structural geometry, fault activity and subsidence history analysis to

  14. High occurrence of Calodium hepaticum (syn. Capillaria hepatica spurious infection in a village in the Atlantic Forest of southern Brazil

    Directory of Open Access Journals (Sweden)

    Débora do Rocio Klisiowicz

    2014-06-01

    Full Text Available Calodium hepaticum (syn. Capillaria hepatica is a nematode of the Capillariidae family that infects rodents and other mammals. In Brazil, human spurious infections of C. hepaticum have been detected in indigenous or rural communities from the Amazon Basin, but not in the southern states of the country. Here, we report the highest occurrence (13.5% of 37 residents of C. hepaticum human spurious infection detected in Brazil and the first record in a southern region, Guaraqueçaba. The finding is explained by the area being located in the Atlantic Forest of the state of Paraná, surrounded by preserved forests and because the inhabitants consume the meat of wild mammals.

  15. Ductile extension of syn-magmatic lower crusts, with application to volcanic passive margins: the Ivrea Zone (Southern Alps, Italy)

    Science.gov (United States)

    Bidault, Marie; Geoffroy, Laurent; Arbaret, Laurent; Aubourg, Charles

    2017-04-01

    Deep seismic reflection profiles of present-day volcanic passive margins often show a 2-layered lower crust, from top to bottom: an apparently ductile 12 km-thick middle-lower layer (LC1) of strong folded reflectors and a 4 km-thick supra-Moho layer (LC2) of horizontal and parallel reflectors. Those layers appear to be structurally disconnected and to develop at the early stages of margins evolution. A magmatic origin has been suggested by several studies to explain those strong reflectors, favoring mafic sills intrusion hypothesis. Overlying mafic and acidic extrusives (Seaward Dipping Reflectors sequences) are bounded by continentward-dipping detachment faults rooting in, and co-structurated with, the ductile part of the lower crust (LC1). Consequently the syn-rift to post-rift evolution of volcanic passive margins (and passive margins in general) largely depends on the nature and the properties of the lower crust, yet poorly understood. We propose to investigate the properties and rheology of a magma-injected extensional lower crust with a field analogue, the Ivrea Zone (Southern Alps, Italy). The Ivrea Zone displays a complete back-thrusted section of a Variscan continental lower crust that first underwent gravitational collapse, and then lithospheric extension. This Late Paleozoic extension was apparently associated with the continuous intrusion of a large volume of mafic to acid magma. Both the magma timing and volume, and the structure of the Ivrea lower crust suggest that this section represents an adequate analogue of a syn-magmatic in-extension mafic rift zone which aborted at the end of the Permian. Notably, we may recognize the 2 layers LC1 and LC2. From a number of tectonic observations, we reconstitute the whole tectonic history of the area, focusing on the strain field evolution with time, in connection with mafic magma injection. We compare those results with available data from extensional mafic lower crusts at rifts and margins.

  16. Polysialic acid modification of the synaptic cell adhesion molecule SynCAM 1 in human embryonic stem cell-derived oligodendrocyte precursor cells

    Directory of Open Access Journals (Sweden)

    Sebastian Werneburg

    2015-05-01

    Full Text Available Oligodendrocyte precursor cells (OPCs are the progenitors of myelinating oligodendrocytes in brain development and repair. Successful myelination depends on the control of adhesiveness during OPC migration and axon contact formation. The decoration of cell surface proteins with the glycan polysialic acid (polySia is a key regulatory element of OPC interactions during development and under pathological conditions. By far the major protein carrier of polySia is the neural cell adhesion molecule NCAM, but recently, polysialylation of the synaptic cell adhesion molecule SynCAM 1 has been detected in the developing mouse brain. In mice, polySia-SynCAM 1 is associated with cells expressing NG2, a marker of a heterogeneous precursor cell population, which is the primary source for oligodendrocytes in development and myelin repair but can also give rise to astrocytes and possibly neurons. It is not yet clear if polySia-SynCAM 1 is expressed by OPCs and its occurrence in humans is elusive. By generating uniform human embryonic stem cell-derived OPC cultures, we demonstrate that polySia is present on human OPCs but down-regulated during differentiation into myelin basic protein-positive oligodendrocytes. PolySia on NCAM resides on the isoforms NCAM-180 and NCAM-140, and SynCAM 1 is identified as a novel polySia acceptor in human OPCs.

  17. Syn-tectonic emplacement of deep-marine reservoir sands at rifting margins : Including a case study from the Vøring Basin

    NARCIS (Netherlands)

    Athmer, W.

    2010-01-01

    This study focuses on the interplay between large-scale relay ramps and sedimentladen flows, specifically low-density turbidity currents that form one end-member of subaqueous sediment gravity flows. The main objective is to better understand the impact of syn-rift faulting on subaqueous sediment

  18. Modeling the Syn-Disposition of Nitrogen Donors in Non-Heme Diiron Enzymes. Synthesis, Characterization, and Hydrogen Peroxide Reactivity of Diiron(III) Complexes with the Syn N-Donor Ligand H2BPG2DEV

    Science.gov (United States)

    Friedle, Simone; Kodanko, Jeremy J.; Morys, Anna J.; Hayashi, Takahiro; Moënne-Loccoz, Pierre; Lippard, Stephen J.

    2009-01-01

    In order to model the syn disposition of histidine residues in carboxylate-bridged non-heme diiron enzymes, we prepared a new dinucleating ligand, H2BPG2DEV, that provides this geometric feature. The ligand incorporates biologically relevant carboxylate functionalities, which have not been explored as extensively as nitrogen-only analogs. Three novel oxo-bridged diiron(III) complexes [Fe2(μ-O)(H2O)2-(BPG2DEV)](ClO4)2 (6), [Fe2(μ-O)(μ-O CAriPrO)(BPG2DEV)](ClO4) (7), and [Fe2(μ-O)(μ-CO3)(BPG2DEV)] (8) were prepared. Single crystal X-ray structural characterization confirms that two pyridines are bound syn with respect to the Fe–Fe vector in these compounds. The carbonato-bridged complex 8 forms quantitatively from 6 in a rapid reaction with gaseous CO2 in organic solvents. A common maroon-colored intermediate (λmax = 490 nm; ε = 1500 M−1 cm−1) forms in reactions of 6, 7, or 8 with H2O2 and NEt3 in CH3CN/H2O solutions. Mass spectrometric analyses of this species, formed using 18O-labeled H2O2, indicate the presence of a peroxide ligand bound to the oxo-bridged diiron(III) center. The Mössbauer spectrum at 90 K of the EPR-silent intermediate exhibits a quadrupole doublet with δ. = 0.58 mm/s and ΔEQ = 0.58 mm/s. The isomer shift is typical for a peroxodiiron(III) species, but the quadrupole splitting parameter is unusually small compared to related complexes. These Mössbauer parameters are comparable to those observed for a peroxo intermediate formed in the reaction of reduced toluene/o-xylene monooxygenase hydroxylase (ToMOH) with dioxygen. Resonance Raman studies reveal an unusually low-energy O–O stretching mode in the peroxo intermediate that is consistent with a short diiron distance. Although peroxodiiron(III) intermediates generated from 6, 7, and 8 are poor O-atom transfer catalysts, they display highly efficient catalase activity, with turnover numbers up to 10,000. In contrast to hydrogen peroxide reactions of diiron(III) complexes that lack

  19. The crustal characteristics at syn- and/or post-rifting in eastern Shikoku basin by seismic reflection survey

    Science.gov (United States)

    Yamashita, M.; Takahashi, N.; Kodaira, S.; Takizawa, K.; No, T.; Miura, S.; Kaneda, Y.

    2008-12-01

    Imaging of the arc-backarc transition zone is important in relation to the backarc opening process. Shikoku Basin locates between the Kyushu-Palau Ridge and the Izu-Ogasawara Arc, which is an important area to reveal the opening evolution of the backarc basins as a part of the growth process of the Philippine Sea. The Shikoku Basin was in the backarc rifting and spreading stage during about 30-15 Ma (e.g. Okino et al., 1994). High P-wave velocity lower crust is identified in arc-backarc transition zone by refraction survey using OBSs (Takahashi et al., 2007). Japan Agency for Marine-Earth Science and Technology (JAMSTEC) carried out multi-channel seismic reflection (MCS) survey using 12,000 cu.in. air gun and 5 km streamer with 204 ch hydrophones in the Izu-Ogasawara region since 2004. We extracted and mapped the crustal characteristics from poststack and prestack depth migrated profiles. According to obtained profiles, the deformation structure with share component is recognized in arc-backarc transition zone, which located eastern side of Shikoku Basin from Zenisu Ridge to about 500 km south. The maximum width of this deformation zone is about 100 km. The relative displacement of horizon is little; however, it is strongly deformed from upper crust beneath seafloor. This deformation zone indicates the post- rifting activity in east side of Shikoku Basin. On the other hand, some knolls are indicated along the en- echelon arrangement from Izu-Ogasawara arc. Ishizuka et al. (2003) reported post-rifting volcanism with Miocene age in en-echelon arrangement. A part of these knolls are estimated to penetrate at syn-rifting and/or post-rifting stage in backarc opening. By comparing the both side of arc-backarc transition zone, we elucidate syn- and post-rifting effect in Shikoku Basin. We also carried out high density MCS surveys in Shikoku Basin in order to IODP proposal site for reconstruction of magmatic processes since Oligocene in rear arc. In this survey, we use new

  20. Death Valley turtlebacks: Mesozoic contractional structures overprinted by Cenozoic extension and metamorphism beneath syn-extensional plutons

    Energy Technology Data Exchange (ETDEWEB)

    Pavlis, T L; Serpa, L [Department of Geological Sciences, University of Texas at El Paso, El Paso, TX 7996 (United States); Miller, M [Department of Geological Sciences, University of Oregon, Eugene, OR 97403 (United States)], E-mail: tlpavlis@utep.edu

    2008-07-01

    The term turtleback was first coined to describe the curvilinear fault surfaces that produced a distinctive geomorphic form in the Black Mountains east of Death Valley, and although it was decades before their full significance was appreciated, they remain one of the most distinctive features of the extensional structure of the Death Valley region. Historically the interpretation of the features has varied markedly, and misconceptions about their character continue to abound, including descriptions in popular field guides for the area. It the 1990's, however, the full history of the systems began to be apparent from several key data: 1) the dating of the plutonic assemblage associated with the turtlebacks demonstrated that late Miocene, syn-extensional plutonism was fundamental to their formation; 2) the plutonic assemblage forms an intrusive sheet structurally above the turtlebacks, indicating a tie between much of the high grade metamorphism and Cenozoic plutonism; 3) a modern analog for the syn-extensional plutonism in the Black Mountains was recognized beneath Death Valley with the imaging of a mid-crustal magma body; 4) the Neogene structural history was worked out in the turtlebacks showing that folding of early-formed shear zones formed the turtleback anticlinoria but overprinting by brittle faults produced the final form as they cut obliquely across the older structure; and 5) the pre-extensional structural history was clarified, demonstrating that Mesozoic basement-involved thrust systems are present within the turtlebacks, but have been overprinted by the extensional system. An unresolved issue is the significance of Eocene U-Pb dates for pegmatites within the region, but presumably these relate somehow to the pre-extensional history. Miller and Pavlis (2005; E. Sci. Rev.) reviewed many features of the turtlebacks, and our working model for the region is that the turtlebacks originated as mid-crustal ductile-thrust systems within the Cordilleran fold

  1. Death Valley turtlebacks: Mesozoic contractional structures overprinted by Cenozoic extension and metamorphism beneath syn-extensional plutons

    International Nuclear Information System (INIS)

    Pavlis, T L; Serpa, L; Miller, M

    2008-01-01

    The term turtleback was first coined to describe the curvilinear fault surfaces that produced a distinctive geomorphic form in the Black Mountains east of Death Valley, and although it was decades before their full significance was appreciated, they remain one of the most distinctive features of the extensional structure of the Death Valley region. Historically the interpretation of the features has varied markedly, and misconceptions about their character continue to abound, including descriptions in popular field guides for the area. It the 1990's, however, the full history of the systems began to be apparent from several key data: 1) the dating of the plutonic assemblage associated with the turtlebacks demonstrated that late Miocene, syn-extensional plutonism was fundamental to their formation; 2) the plutonic assemblage forms an intrusive sheet structurally above the turtlebacks, indicating a tie between much of the high grade metamorphism and Cenozoic plutonism; 3) a modern analog for the syn-extensional plutonism in the Black Mountains was recognized beneath Death Valley with the imaging of a mid-crustal magma body; 4) the Neogene structural history was worked out in the turtlebacks showing that folding of early-formed shear zones formed the turtleback anticlinoria but overprinting by brittle faults produced the final form as they cut obliquely across the older structure; and 5) the pre-extensional structural history was clarified, demonstrating that Mesozoic basement-involved thrust systems are present within the turtlebacks, but have been overprinted by the extensional system. An unresolved issue is the significance of Eocene U-Pb dates for pegmatites within the region, but presumably these relate somehow to the pre-extensional history. Miller and Pavlis (2005; E. Sci. Rev.) reviewed many features of the turtlebacks, and our working model for the region is that the turtlebacks originated as mid-crustal ductile-thrust systems within the Cordilleran fold

  2. Rational design of syn-safencin, a novel linear antimicrobial peptide derived from the circular bacteriocin safencin AS-48.

    Science.gov (United States)

    Fields, Francisco R; Carothers, Katelyn E; Balsara, Rashna D; Ploplis, Victoria A; Castellino, Francis J; Lee, Shaun W

    2018-06-01

    Bacteriocins hold unprecedented promise as a largely untapped source of antibiotic alternatives in the age of multidrug resistance. Here, we describe the first approach to systematically design variants of a novel AS-48 bacteriocin homologue, which we have termed safencin AS-48, from Bacillus safensis, to gain insights into engineering improved activity of bacteriocins. A library of synthetic peptides in which systematic amino acid substitutions to vary the periodicity and abundance of polar, acidic, aliphatic, and hydrophobic residues were generated for a total of 96 novel peptide variants of a single bacteriocin candidate. Using this method, we identified nine synthetic safencin (syn-safencin) variants with broad and potent antimicrobial activities with minimal inhibitory concentrations (MIC) as low as 250 nM against E. coli, P. aeruginosa, X. axonopodis, and S. pyogenes with minimal cytotoxicity to mammalian cells. It is anticipated that the strategies we have developed will serve as general guides for tuning the specificity of a given natural bacteriocin compound for therapeutic specificity.

  3. Segmental allotetraploidy and allelic interactions in buffelgrass (Pennisetum ciliare (L.) Link syn. Cenchrus ciliaris L.) as revealed by genome mapping.

    Science.gov (United States)

    Jessup, R W; Burson, B L; Burow, O; Wang, Y W; Chang, C; Li, Z; Paterson, A H; Hussey, M A

    2003-04-01

    Linkage analyses increasingly complement cytological and traditional plant breeding techniques by providing valuable information regarding genome organization and transmission genetics of complex polyploid species. This study reports a genome map of buffelgrass (Pennisetum ciliare (L.) Link syn. Cenchrus ciliaris L.). Maternal and paternal maps were constructed with restriction fragment length polymorphisms (RFLPs) segregating in 87 F1 progeny from an intraspecific cross between two heterozygous genotypes. A survey of 862 heterologous cDNAs and gDNAs from across the Poaceae, as well as 443 buffelgrass cDNAs, yielded 100 and 360 polymorphic probes, respectively. The maternal map included 322 RFLPs, 47 linkage groups, and 3464 cM, whereas the paternal map contained 245 RFLPs, 42 linkage groups, and 2757 cM. Approximately 70 to 80% of the buffelgrass genome was covered, and the average marker spacing was 10.8 and 11.3 cM on the respective maps. Preferential pairing was indicated between many linkage groups, which supports cytological reports that buffelgrass is a segmental allotetraploid. More preferential pairing (disomy) was found in the maternal than paternal parent across linkage groups (55 vs. 38%) and loci (48 vs. 15%). Comparison of interval lengths in 15 allelic bridges indicated significantly less meiotic recombination in paternal gametes. Allelic interactions were detected in four regions of the maternal map and were absent in the paternal map.

  4. Pre- and syn-Ross orogenic granitoids at Drake Head and Kartografov Island, Oates Coast, northern Victoria Land, East Antarctica

    International Nuclear Information System (INIS)

    Adams, C.J.; Roland, N.W.

    2002-01-01

    The majority of the Oates Coast, northern Victoria Land granitoids, typified by those at Drake Head and Kartografov Island (Harald Bay), are monzogranites with lesser granodiorites and minor quartz-monzodiorite and syenogranite. All are plagioclase-K-feldspar-biotite granitoids with additional muscovite, garnet and/or hornblende, and are subalkaline and peraluminous. Berg Granite typifies the early Ordovician, Granite Harbour Instrusive (GHI) suite of the Ross Orogen at the Oates Coast. Granitoids from Kartografov Island have higher amounts of Fe+Mg+Ti and an ambiguous Rb-Sr geochronology: they could be either pre-Ross Orogeny in age, or syn-Ross Orogeny and representing a lower structural level of GHI. The Drake Head granite gneiss has a fractionated leuco-granite composition similar to Berg Granite, and is intruded by granite and granodiorite. Rb-Sr ages indicate that all are Neoproterozoic, although the granite gneiss result is probably an errorchron age, reflecting its less uniform nature (granodiorite:649 ± 30 Ma, initial ratio 0.7065 +/- 6; granite gneiss: 682 ± 140 Ma, initial ratio 0.7107 ± 50). These late Neoproterozoic granitoids provide a source for distinctive detrital zircon age components in extensive early Paleozoic turbidites of Australia-New Zealand-Antarctica. (author). 24 refs., 5 figs., 1 tab

  5. Inversion of Configuration at the Phosphorus Nucleophile in the Diastereoselective and Enantioselective Synthesis of P-Stereogenic syn-Phosphiranes from Chiral Epoxides.

    Science.gov (United States)

    Muldoon, Jake A; Varga, Balázs R; Deegan, Meaghan M; Chapp, Timothy W; Eördögh, Ádám M; Hughes, Russell P; Glueck, David S; Moore, Curtis E; Rheingold, Arnold L

    2018-04-23

    Nucleophilic substitution results in inversion of configuration at the electrophilic carbon center (S N 2) or racemization (S N 1). The stereochemistry of the nucleophile is rarely considered, but phosphines, which have a high barrier to pyramidal inversion, attack electrophiles with retention of configuration at P. Surprisingly, cyclization of bifunctional secondary phosphine alkyl tosylates proceeded under mild conditions with inversion of configuration at the nucleophile to yield P-stereogenic syn-phosphiranes. DFT studies suggested that the novel stereochemistry results from acid-promoted tosylate dissociation to yield an intermediate phosphenium-bridged cation, which undergoes syn-selective cyclization. © 2018 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.

  6. Syn-Selective Synthesis of β-Branched α-Amino Acids by Alkylation of Glycine-Derived Imines with Secondary Sulfonates.

    Science.gov (United States)

    Lou, Sha; McKenna, Grace M; Tymonko, Steven A; Ramirez, Antonio; Benkovics, Tamas; Conlon, David A; González-Bobes, Francisco

    2015-10-16

    A syn-selective synthesis of β-branched α-amino acids has been developed based on the alkylation of glycine imine esters with secondary sulfonates. The potassium counterion for the enolate, the solvent, and the leaving group on the electrophile were key levers to maximize the diasteroselectivity of the alkylation. The optimized conditions enabled a straightforward preparation of a number of β-branched α-amino acids that can be challenging to obtain.

  7. Acquiring research-grade ERPs on a shoestring budget: A comparison of a modified Emotiv and commercial SynAmps EEG system.

    Science.gov (United States)

    Barham, Michael P; Clark, Gillian M; Hayden, Melissa J; Enticott, Peter G; Conduit, Russell; Lum, Jarrad A G

    2017-09-01

    This study compared the performance of a low-cost wireless EEG system to a research-grade EEG system on an auditory oddball task designed to elicit N200 and P300 ERP components. Participants were 15 healthy adults (6 female) aged between 19 and 40 (M = 28.56; SD = 6.38). An auditory oddball task was presented comprising 1,200 presentations of a standard tone interspersed by 300 trials comprising a deviant tone. EEG was simultaneously recorded from a modified Emotiv EPOC and a NeuroScan SynAmps RT EEG system. The modifications made to the Emotiv system included attaching research grade electrodes to the Bluetooth transmitter. Additional modifications enabled the Emotiv system to connect to a portable impedance meter. The cost of these modifications and portable impedance meter approached the purchase value of the Emotiv system. Preliminary analyses revealed significantly more trials were rejected from data acquired by the modified Emotiv compared to the SynAmps system. However, the ERP waveforms captured by the Emotiv system were found to be highly similar to the corresponding waveform from the SynAmps system. The latency and peak amplitude of N200 and P300 components were also found to be similar between systems. Overall, the results indicate that, in the context of an oddball task, the ERP acquired by a low-cost wireless EEG system can be of comparable quality to research-grade EEG acquisition equipment. © 2017 Society for Psychophysiological Research.

  8. Heterobimetallic transition metal/rare earth metal bifunctional catalysis: a Cu/Sm/Schiff base complex for syn-selective catalytic asymmetric nitro-Mannich reaction.

    Science.gov (United States)

    Handa, Shinya; Gnanadesikan, Vijay; Matsunaga, Shigeki; Shibasaki, Masakatsu

    2010-04-07

    The full details of a catalytic asymmetric syn-selective nitro-Mannich reaction promoted by heterobimetallic Cu/Sm/dinucleating Schiff base complexes are described, demonstrating the effectiveness of the heterobimetallic transition metal/rare earth metal bifunctional catalysis. The first-generation system prepared from Cu(OAc)(2)/Sm(O-iPr)(3)/Schiff base 1a = 1:1:1 with an achiral phenol additive was partially successful for achieving the syn-selective catalytic asymmetric nitro-Mannich reaction. The substrate scope and limitations of the first-generation system remained problematic. After mechanistic studies on the catalyst prepared from Sm(O-iPr)(3), we reoptimized the catalyst preparation method, and a catalyst derived from Sm(5)O(O-iPr)(13) showed broader substrate generality as well as higher reactivity and stereoselectivity compared to Sm(O-iPr)(3). The optimal system with Sm(5)O(O-iPr)(13) was applicable to various aromatic, heteroaromatic, and isomerizable aliphatic N-Boc imines, giving products in 66-99% ee and syn/anti = >20:1-13:1. Catalytic asymmetric synthesis of nemonapride is also demonstrated using the catalyst derived from Sm(5)O(O-iPr)(13).

  9. Syn-depositional deformation of the late Zechstein evaporites on the Friesland Platform capturing the early life of a salt giant

    Science.gov (United States)

    Raith, Alexander; Urai, Janos L.

    2017-04-01

    It is often thought that the deposition of the Zechstein of NE Netherlands took place in a tectonically quiet environment and experienced complex deformation later. While early deformation structures were mostly overprinted by later salt flow, we focused on the Friesland platform, which was only weakly affected by later salt tectonics. In this study, we analyzed the present structures and deformation history with the help of 3D seismic and well data. Results show that the ZIII AC stringer contains (i) a regional network of thicker zones (TZ), and (ii) a network of zones where the stringers are absent, interpreted as ruptures formed by salt flow. These ruptures in many cases mark a clear vertical shift of the sub-horizontal stringer. Mapping of the base salt and top salt reflectors shows that the ruptures often coincide with faults at base Zechstein level, and that the thickness of the post-stringer rock salt layers is thicker where the stringers are lower, while the total salt thickness is relatively constant. We interpret these structures as evidence for movement on the faults at base salt, during Zechstein times, suggesting that late Zechstein deposition was syn-tectonic. Spatial correlation of TZ and these syn-depositional depressions also indicate syn-depositional or very early development of thickening in the ZIII-AC stringer. They are interpreted to reflect the interaction of anhydrite dewatering pathways and dissolution of salt below fracture systems in the stringer localized by the active shear zones in the salt.

  10. Syn for sagn

    DEFF Research Database (Denmark)

    Nyvang, Caroline

    2013-01-01

    and a representative of the early folkloristic movement, and his engagement in three different photographical projects during the years 1895—1927. Through a study of the actual pictures as well as readings of Olrik’s personal letters, applications for funding, and academic writings, two main arguments for the use...... of photography are identified: one line of argumentation pertains to the potential of photography as a conservatory technology; another series of reasons promotes photographs as a particularly well-suited medium for conveying the past in a holistic way. Furthermore, the article shows how these arguments hinge...

  11. Revision of the Megaperidae Manter, 1934 n. comb. (Syn. Apocreadiidae Skrjabin, 1942) including a reorganization of the Schistorchiinae Yamaguti, 1942.

    Science.gov (United States)

    Blend, Charles K; Karar, Yasser F M; Dronen, Norman O

    2017-11-28

    Modified and/or new keys to the four subfamilies now recognized within the Megaperidae Manter, 1934 n. comb. (Syn. Apocreadiidae Skrjabin, 1942) as well as the genera within each subfamily are presented. Two new genera, Paraschistorchis n. gen. and Plesioschistorchis n. gen., both within the Schistorchiinae Yamaguti, 1942, are erected and keys are provided to the species considered in both new genera-distinguished by possessing caeca that end either in separate ani or blindly. Plesioschistorchis callyodontis (Yamaguti, 1942) n. comb. and Plesioschistorchis haridis (Nagaty, 1957) n. comb. are re-described from new material collected from the common parrotfish, Scarus psittacus Forsskål (Perciformes: Scaridae), inhabiting the Red Sea off Egypt; S. psittacus represents a new host record for both species. The taxonomic status of Schistorchis sensu stricto Lühe, 1906 is examined and revised, a key to the four species we consider in this genus offered, and the monotypic genus Megacreadium Nagaty, 1956 declared a junior synonym of Schistorchis. Members of Schistorchis sensu stricto possess a unique "complex" (i.e. highly cellular/glandular) instead of "simple" (i.e. entirely muscular) type of oral sucker that is quite large in relation to body size; an elongate, somewhat sub-rectangular-shaped body; 5+ testes arranged in at least two rows; caeca that open via separate ani; a long post-testicular region; a median genital pore either at the anterior margin of or just anterior to the ventral sucker; and species of Schistorchis sensu stricto parasitize the intestine of marine fish within the Order Tetraodontiformes Berg. With the revision of this genus, we re-describe Schistorchis carneus Lühe, 1906 from the lower and mid-intestine of the white-spotted puffer, Arothron hispidus (Linnaeus) (Tetraodontiformes: Tetraodontidae), collected in the Red Sea off Egypt. Finally, a plea is made for further study of the Megaperidae n. comb. focusing, in particular, on the following

  12. A spore counting method and cell culture model for chlorine disinfection studies of Encephalitozoon syn. Septata intestinalis.

    Science.gov (United States)

    Wolk, D M; Johnson, C H; Rice, E W; Marshall, M M; Grahn, K F; Plummer, C B; Sterling, C R

    2000-04-01

    The microsporidia have recently been recognized as a group of pathogens that have potential for waterborne transmission; however, little is known about the effects of routine disinfection on microsporidian spore viability. In this study, in vitro growth of Encephalitozoon syn. Septata intestinalis, a microsporidium found in the human gut, was used as a model to assess the effect of chlorine on the infectivity and viability of microsporidian spores. Spore inoculum concentrations were determined by using spectrophotometric measurements (percent transmittance at 625 nm) and by traditional hemacytometer counting. To determine quantitative dose-response data for spore infectivity, we optimized a rabbit kidney cell culture system in 24-well plates, which facilitated calculation of a 50% tissue culture infective dose (TCID(50)) and a minimal infective dose (MID) for E. intestinalis. The TCID(50) is a quantitative measure of infectivity and growth and is the number of organisms that must be present to infect 50% of the cell culture wells tested. The MID is as a measure of a system's permissiveness to infection and a measure of spore infectivity. A standardized MID and a standardized TCID(50) have not been reported previously for any microsporidian species. Both types of doses are reported in this paper, and the values were used to evaluate the effects of chlorine disinfection on the in vitro growth of microsporidia. Spores were treated with chlorine at concentrations of 0, 1, 2, 5, and 10 mg/liter. The exposure times ranged from 0 to 80 min at 25 degrees C and pH 7. MID data for E. intestinalis were compared before and after chlorine disinfection. A 3-log reduction (99.9% inhibition) in the E. intestinalis MID was observed at a chlorine concentration of 2 mg/liter after a minimum exposure time of 16 min. The log(10) reduction results based on percent transmittance-derived spore counts were equivalent to the results based on hemacytometer-derived spore counts. Our data

  13. Syn- and Post-Accretionary Structures in the Neoproterozoic Central Allaqi-Heiani Suture Zone, Southeastern Egypt

    Science.gov (United States)

    Abdeen, M. M.; Abdelghaffar, A. A.

    2012-04-01

    The Allaqi-Heiani suture (AHS) is the western part of the main Allaqi-Heiani-Gerf-Onib-Sol Hamed-Yanbu suture and represents one of the Neoproterozoic, arc-arc sutures in the Arabian-Nubian Shield (ANS). It separates the ca. 750 Ma South Eastern Desert terrane in the north from the ca. 830-720 Ma Gabgaba terrane in the south. The AHS is a deformed belt of ophiolitic rocks, syn-tectonic granitoids and metasediments. The central AHS zone is divided into three structural domains. The western domain (Ι) is characterized by NNE low thrusts and SSW-vergent folds. The central domain (ΙΙ) includes upright tight to isoclinal NNW-SSE oriented folds and transpressional faults. The eastern domain (ΙΙΙ) shows NNW-SSE oriented open folds. Structural analysis indicates that the area has a poly-phase deformation history involving at least two events. Event D1 was an N-S to NNE-SSW regional shortening generating the SSW-verging folds and the NNE dipping thrusts. Event D2 was an ENE-WSW shortening producing NNW-SSE oriented folds in the central and eastern parts of the study area and reactivating older thrusts with oblique-slip reverse fault movement. The tectonic evolution of the area involves two episodes of collision: an early collision between the South Eastern Desert terrane and the Gabgaba terrane along the AHS after the consumption of a basin floored by oceanic crust above a north-dipping subduction zone; and a later collision between East- and West-Gondwanas at ca. 750-650 Ma, leading to the closure of the Mozambique Ocean. This collision deformed the AHS along N-S trending shortening zones and produced NW-SE and NE-SW oriented sinistral and dextral transpressional faults, respectively. The early collision episode is related to the terrane accretion during the early Pan-African orogen, while the later phase is related to a late Pan-African or Najd orogen.

  14. Assessment of pre-crisis and syn-crisis seismic hazard at Campi Flegrei and Mt. Vesuvius volcanoes, Campania, southern Italy

    Science.gov (United States)

    Convertito, Vincenzo; Zollo, Aldo

    2011-08-01

    In this study, we address the issue of short-term to medium-term probabilistic seismic hazard analysis for two volcanic areas, Campi Flegrei caldera and Mt. Vesuvius in the Campania region of southern Italy. Two different phases of the volcanic activity are considered. The first, which we term the pre-crisis phase, concerns the present quiescent state of the volcanoes that is characterized by low-to-moderate seismicity. The second phase, syn-crisis, concerns the unrest phase that can potentially lead to eruption. For the Campi Flegrei case study, we analyzed the pattern of seismicity during the 1982-1984 ground uplift episode (bradyseism). For Mt. Vesuvius, two different time-evolutionary models for seismicity were adopted, corresponding to different ways in which the volcano might erupt. We performed a site-specific analysis, linked with the hazard map, to investigate the effects of input parameters, in terms of source geometry, mean activity rate, periods of data collection, and return periods, for the syn-crisis phase. The analysis in the present study of the pre-crisis phase allowed a comparison of the results of probabilistic seismic hazard analysis for the two study areas with those provided in the Italian national hazard map. For the Mt. Vesuvius area in particular, the results show that the hazard can be greater than that reported in the national hazard map when information at a local scale is used. For the syn-crisis phase, the main result is that the data recorded during the early months of the unrest phase are substantially representative of the seismic hazard during the whole duration of the crisis.

  15. Purine 3':5'-cyclic nucleotides with the nucleobase in a syn orientation: cAMP, cGMP and cIMP.

    Science.gov (United States)

    Řlepokura, Katarzyna Anna

    2016-06-01

    Purine 3':5'-cyclic nucleotides are very well known for their role as the secondary messengers in hormone action and cellular signal transduction. Nonetheless, their solid-state conformational details still require investigation. Five crystals containing purine 3':5'-cyclic nucleotides have been obtained and structurally characterized, namely adenosine 3':5'-cyclic phosphate dihydrate, C10H12N5O6P·2H2O or cAMP·2H2O, (I), adenosine 3':5'-cyclic phosphate 0.3-hydrate, C10H12N5O6P·0.3H2O or cAMP·0.3H2O, (II), guanosine 3':5'-cyclic phosphate pentahydrate, C10H12N5O7P·5H2O or cGMP·5H2O, (III), sodium guanosine 3':5'-cyclic phosphate tetrahydrate, Na(+)·C10H11N5O7P(-)·4H2O or Na(cGMP)·4H2O, (IV), and sodium inosine 3':5'-cyclic phosphate tetrahydrate, Na(+)·C10H10N4O7P(-)·4H2O or Na(cIMP)·4H2O, (V). Most of the cyclic nucleotide zwitterions/anions [two from four cAMP present in total in (I) and (II), cGMP in (III), cGMP(-) in (IV) and cIMP(-) in (V)] are syn conformers about the N-glycosidic bond, and this nucleobase arrangement is accompanied by Crib-H...Npur hydrogen bonds (rib = ribose and pur = purine). The base orientation is tuned by the ribose pucker. An analysis of data obtained from the Cambridge Structural Database made in the context of syn-anti conformational preferences has revealed that among the syn conformers of various purine nucleotides, cyclic nucleotides and dinucleotides predominate significantly. The interactions stabilizing the syn conformation have been indicated. The inter-nucleotide contacts in (I)-(V) have been systematized in terms of the chemical groups involved. All five structures display three-dimensional hydrogen-bonded networks.

  16. Efficient Synthesis of Differentiated syn-1,2-Diol Derivatives by Asymmetric Transfer Hydrogenation-Dynamic Kinetic Resolution of α-Alkoxy-Substituted β-Ketoesters.

    Science.gov (United States)

    Monnereau, Laure; Cartigny, Damien; Scalone, Michelangelo; Ayad, Tahar; Ratovelomanana-Vidal, Virginie

    2015-08-10

    Asymmetric transfer hydrogenation was applied to a wide range of racemic aryl α-alkoxy-β-ketoesters in the presence of well-defined, commercially available, chiral catalyst Ru(II) -(N-p-toluenesulfonyl-1,2-diphenylethylenediamine) and a 5:2 mixture of formic acid and triethylamine as the hydrogen source. Under these conditions, dynamic kinetic resolution was efficiently promoted to provide the corresponding syn α-alkoxy-β-hydroxyesters derived from substituted aromatic and heteroaromatic aldehydes with a high level of diastereoselectivity (diastereomeric ratio (d.r.)>99:1) and an almost perfect enantioselectivity (enantiomeric excess (ee)>99 %). Additionally, after extensive screening of the reaction conditions, the use of Ru(II) - and Rh(III) -tethered precatalysts extended this process to more-challenging substrates that bore alkenyl-, alkynyl-, and alkyl substituents to provide the corresponding syn α-alkoxy-β-hydroxyesters with excellent enantiocontrol (up to 99 % ee) and good to perfect diastereocontrol (d.r.>99:1). Lastly, the synthetic utility of the present protocol was demonstrated by application to the asymmetric synthesis of chiral ester ethyl (2S)-2-ethoxy-3-(4-hydroxyphenyl)-propanoate, which is an important pharmacophore in a number of peroxisome proliferator-activated receptor α/γ dual agonist advanced drug candidates used for the treatment of type-II diabetes. © 2015 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

  17. SynPAnal: software for rapid quantification of the density and intensity of protein puncta from fluorescence microscopy images of neurons.

    Directory of Open Access Journals (Sweden)

    Eric Danielson

    Full Text Available Continuous modification of the protein composition at synapses is a driving force for the plastic changes of synaptic strength, and provides the fundamental molecular mechanism of synaptic plasticity and information storage in the brain. Studying synaptic protein turnover is not only important for understanding learning and memory, but also has direct implication for understanding pathological conditions like aging, neurodegenerative diseases, and psychiatric disorders. Proteins involved in synaptic transmission and synaptic plasticity are typically concentrated at synapses of neurons and thus appear as puncta (clusters in immunofluorescence microscopy images. Quantitative measurement of the changes in puncta density, intensity, and sizes of specific proteins provide valuable information on their function in synaptic transmission, circuit development, synaptic plasticity, and synaptopathy. Unfortunately, puncta quantification is very labor intensive and time consuming. In this article, we describe a software tool designed for the rapid semi-automatic detection and quantification of synaptic protein puncta from 2D immunofluorescence images generated by confocal laser scanning microscopy. The software, dubbed as SynPAnal (for Synaptic Puncta Analysis, streamlines data quantification for puncta density and average intensity, thereby increases data analysis throughput compared to a manual method. SynPAnal is stand-alone software written using the JAVA programming language, and thus is portable and platform-free.

  18. Déformation gravitaire synsédimentaire sur une marge passive. Modélisation analogique et application au Golfe de Guinée.

    OpenAIRE

    Mauduit , Thomas

    1996-01-01

    Mémoires de Géosciences Rennes, n °83 , 260p. ISBN : 2-905532-82-3; La marge passive ouest africaine, postérieure à l'ouverture de l'Atlantique sud, offre un exemple très spectaculaire de glissement gravitaire synsédimentaire post-aptien à actuel sur une épaisse couche d'évaporites. Les données issues de l'exploration pétrolière intensive menée depuis plus de 20 années servent ici de base pour une analyse cinématique et mécanique des structures caractéristiques résultant des interactions entr...

  19. A study of the distribution, structure and seismic stratigraphy of syn-breakup and post-breakup sediments in the Faroe sector of the Faroe-Shetland Basin

    DEFF Research Database (Denmark)

    Olavsdottir, Jana

    Emplacement of the Cenozoic sediments in the Faroese sector of the Faroe-Shetland Basin appear to be controlled by decelerating thermal subsidence of the basin, and local uplift of sediment source areas. However, the actual distribution of sediments appears to be controlled by re-activation...... of older, Mesozoic structural elements controlling the sediment path way and restricting the depositional areas. The structural elements being re-activated at different times causing considerable structural complexity. Understanding older, Mesozoic, structural elements control on sedimentation...... is a potential tool understanding deviations from “normal” thermal subsidence and for predicting the prospectivity in syn- and post-rift succession in the Faroe-Shetland Basin. On top of the basalt in the Faroe-Shetland Basin there is deposited up to 3.5 km thick sedimentary package, which led into the basin...

  20. Chemical communication in termites: syn-4,6-dimethylundecan-1-ol as trail-following pheromone, syn-4,6-dimethylundecanal and (5E)-2,6,10-trimethylundeca-5,9-dienal as the respective male and female sex pheromones in Hodotermopsis sjoestedti (Isoptera, Archotermopsidae).

    Science.gov (United States)

    Lacey, Michael J; Sémon, Etienne; Krasulová, Jana; Sillam-Dussès, David; Robert, Alain; Cornette, Richard; Hoskovec, Michal; Záček, Petr; Valterová, Irena; Bordereau, Christian

    2011-12-01

    The trail-following pheromone and sex pheromones were investigated in the Indomalayan termite Hodotermopsis sjoestedti belonging to the new family Archotermopsidae. Gas chromatography coupled to mass spectrometry (GC-MS) after solid phase microextraction (SPME) of the sternal gland secretion of pseudergates and trail-following bioassays demonstrated that the trail-following pheromone of H. sjoestedti was syn-4,6-dimethylundecan-1-ol, a new chemical structure for termite pheromones. GC-MS after SPME of the sternal gland secretion of alates also allowed the identification of sex-specific compounds. In female alates, the major sex-specific compound was identified as (5E)-2,6,10-trimethylundeca-5,9-dienal, a compound previously identified as the female sex pheromone of the termite Zootermopsis nevadensis. In male alates, the major sex-specific compound was identified as syn-4,6-dimethylundecanal, a homolog of syn-4,6-dimethyldodecanal, which has previously been confirmed as the male sex pheromone of Z. nevadensis. The presence of sex-specific compounds in alates of H. sjoestedti strongly suggests for this termite the presence of sex-specific pairing pheromones which were only known until now in Z. nevadensis. Our results showed therefore a close chemical relationship between the pheromones of the taxa Hodotermopsis and Zootermopsis and, in contrast, a clear difference with the taxa Stolotermes and Porotermes, which is in total agreement with the recent creation of the families Archotermopsidae and Stolotermitidae as a substitute for the former family Termopsidae. Copyright © 2011 Elsevier Ltd. All rights reserved.

  1. Tectono-stratigraphy of the Lower Cretaceous Syn-rift Succession in Bongor Basin, Chad: Insights into Structural Controls on Sedimentary Infill of a Continental Rift

    Science.gov (United States)

    Chen, C.; Ji, Y.; Wei, X.; An, F.; Li, D.; Zhu, R.

    2017-12-01

    In a rift basin, the dispersal and deposition of sediments is significantly influenced by the paleo-topography, which is highly controlled by the evolution and interaction of normal faults in different scales. To figure out the impact of faults evolution and topographic elements towards sedimentary fillings, we investigated the Lower Cretaceous syn-rift package in Bongor Basin, south of Chad Republic. Constrained with 2D and 3D seismic data, core data and logging information, a sequence stratigraphy architecture and a variety of depositional systems are recognized, including fan delta, braided delta, sub-lacustrine fan and lacustrine system. We also studied the spatial distribution and temporal evolution of clastic depositional systems of the syn-rift complex, and valuable insights into structural controls of sequence architectures and depositional systems are provided. During the evolution of rift basin, marginal structures such as relay ramps and strike-slipping boundary transfer fault are major elements that influence the main sediments influx points. Release faults in the hanging-wall could form a differential evolution pattern for accommodation, and effect the deposition systems in the early stage of rift evolution. Oblique crossing-faults, minor faults that develop on the erosional uplift in the interior foot-wall, would cut the uplifts and provide faulted-through paths for the over-filled sediments in the accommodation space, making it possible to develop sedimentary systems towards the center of basin during the early stage of rift evolution, although the origins of such minor faults still need further discussion. The results of this research indicate that different types of fault interactions have a fundamental control on patterns of sediment dispersal during early stage of rift basins.

  2. Stereochemical probes of bovine plasma amine oxidase: evidence for mirror image processing and a syn abstraction of hydrogens from C-1 and C-2 of dopamine

    International Nuclear Information System (INIS)

    Farnum, M.F.; Klinman, J.P.

    1986-01-01

    Bovine plasma amine oxidase (PAO) has previously been shown to catalyze a nonstereospecific loss of tritium from [2(R)- 3 H]- and [2(S)- 3 H]dopamines, attributed to multiple, catalytically active binding sites for substrate. Analysis of products formed from incubation of dopamine with PAO in tritiated water indicates a stereospecific, pro-R, incorporation of label at C-2. Thus, tritium washout (random) and washin (pro-R) are not the microscopic reverse of one another. We conclude that the (enamine) intermediates leading to tritium washin are nonequivalently bound. The observation of pro-R incorporation has provided a straightforward synthetic route to [1(R)- 2 H,2(R)- 3 H]- and [1(S)- 2 H,2(R)- 3 H]dopamines, which upon oxidation with PAO are expected to be processed preferentially by 1S and 1R cleavage, respectively. From previously measured isotope effects, we predict the loss of tritium from the 1(R)-2H and 1(S)-2H samples to be 74:8 for a syn relationship between cleavage at C-1 and C-2 vs. 21:90 for an anti relationship. The observation of a 68:18 ratio at 100% conversion provides strong evidence for a syn cleavage. The data support a mechanism in which a single base catalyzes a 1,3-prototrophic shift of hydrogen from C-1 of the substrate to cofactor, followed by exchange from C-2. Additionally, the results confirm the presence of alternate binding modes for dopamine at the active site of bovine plasma amine oxidase. This interaction of dopamine with plasma amine oxidase is a rare example of mirror-image catalysis in which a single substrate has two functional binding orientations on an enzyme surface

  3. Paléocontraintes et déformations syn- et post-collision Afrique Europe identifiées dans la couverture mésozoïque et cénozoïque du Haut Atlas occidental (Maroc)Syn- and post-collision Africa Europe palaeostresses and deformations identified in the West High-Atlas Mesozoic and Cenozoic cover (Morocco)

    Science.gov (United States)

    Amrhar, Mostafa

    Palaeostresses and deformation axis reconstruction related to the intracontinental High-Atlas uplift evidences two shortening phases from Upper Cretaceous to Quaternary. The first compression is oriented N20-30°E and is Maastrichtian to Oligocene age; the second one, oriented N120-160°E, is syn-Mio-Pliocene. Tectonic inversion of the lateral to compressive Jurassic regime is contemporaneous with the beginning of Africa and Europe collision. Rotation of the Mio-Pliocene shortening orientation could be linked to the change of the convergence direction between the Africa and Europe plates. To cite this article: M. Amrhar, C. R. Geoscience 334 (2002) 279-285.

  4. Extraction of metals such as Pu, U and Sr with an organic solvent or a solid phase containing a cis-syn-cis isomer of the crown ether DCH18C6

    International Nuclear Information System (INIS)

    Guy, A.; Foos, J.; Lemaire, M.; Guyon, V.; Chomel, R.; Doutreluigne, P.; Le Roy, H.

    1991-01-01

    The cis-syn-cis isomer of the crown ether DCH18C6 is used in solution in an organic diluent such as benzonitrile or dichlorethane, or on a solid phase such as silica. The use of this isomer increases the extraction ratio of plutonium and strontium of solution from spent fuel reprocessing or from aqueous effluents containing Sr or Pu [fr

  5. Hybrid macrocycle formation and spiro annulation on cis-syn-cis-tricyclo[6.3.0.02,6]undeca-3,11-dione and its congeners via ring-closing metathesis

    Directory of Open Access Journals (Sweden)

    Sambasivarao Kotha

    2015-07-01

    Full Text Available We have developed a simple methodology to transform cis-syn-cis-triquinane derivative 2 into the diindole based macrocycle 6 involving Fischer indolization and ring-closing metathesis (RCM. Various spiro-polyquinane derivatives have been assembled via RCM as a key step.

  6. Syn-anti conformational switching in an ethane-bridged Co(II)bisporphyrin induced by external stimuli: effects of inter-macrocyclic interactions, axial ligation and chemical and electrochemical oxidations.

    Science.gov (United States)

    Dey, Soumyajit; Rath, Sankar Prasad

    2014-02-07

    The syn-anti conformational switching has been demonstrated in the ethane-bridged dicobalt(II)bisporphyrin which is present in the syn-form only. The addition of either perylene or axial ligands to Co(II)(bisporphyrin) completely transforms the syn form into the anti because of strong π-π interaction and axial coordination, respectively. The complex undergoes four 1e-oxidations in CH2Cl2 which are indicative of strong through space interactions between the two cofacial Co-porphyrins at 295 K. The first oxidation is a metal centered one and occurs at a potential much lower than that of the monomeric analog. However, the second oxidation, which is again metal centered, was at a significantly higher potential. The large difference between the first two oxidations, as observed here, is due to much stronger inter-porphyrin interactions. The step-wise oxidations have been performed both chemically and electro-chemically while the progress of the reactions was monitored by UV-visible and (1)H NMR spectroscopy. After 1e-oxidation, a very broad (1)H NMR signal results with increased difference between two meso resonances, which indicates that the two macrocycles are in the syn-form with lesser interplanar separation as also observed by DFT. However, 2e-oxidation results in the stabilization of the anti form. The addition of axial ligands to Co(II)(bisporphyrin) also completely transforms the syn form into the anti form. While additions of THF and I2/I(-) both result in the formation of five-coordinate complexes, Co(II) is oxidized to Co(III) in the case of the latter. However, additions of 1-methylimidazole, pyridine and pyrazine as axial ligands result in the formation of a six-coordinate complex in which Co(II) is spontaneously oxidized to Co(III) in air.

  7. Dips, ramps, and rolls- Evidence for paleotopographic and syn-depositional fault control on the Western Kentucky No. 4 coal bed, tradewater formation (Bolsovian) Illinois Basin

    Science.gov (United States)

    Greb, S.F.; Eble, C.F.; Williams, D.A.; Nelson, W.J.

    2001-01-01

    The Western Kentucky No. 4 coal is a high-volatile B to high-volatile C bituminous coal that has been heavily mined along the southern margin of the Western Kentucky Coal Field. The seam has a reputation for rolling floor elevation. Elongate trends of floor depressions are referred to as "dips" and "rolls" by miners. Some are relatively narrow and straight to slightly curvilinear in plan view, with generally symmetric to slightly asymmetric cross-sections. Others are broader and asymmetric in section, with sharp dips on one limb and gradual, ramp-like dips on the other. Some limbs change laterally from gradual dip, to sharp dip, to offset of the coal. Lateral changes in the rate of floor elevation dip are often associated with changes in coal thickness, and in underground mines, changes in floor elevation are sometimes associated with roof falls and haulage problems. In order to test if coal thickness changes within floor depressions were associated with changes in palynology, petrography and coal quality, the coal was sampled at a surface mine across a broad. ramp-like depression that showed down-dip coal thickening. Increment samples of coal from a thick (150 cm), down-ramp and thinner (127 cm), up-ramp position at one surface mine correlate well between sample sites (a distance of 60 m) except for a single increment. The anomalous increment (31 cm) in the lower-middle part of the thick coal bed contained 20% more Lycospora orbicula spores. The rolling floor elevations noted in the study mines are inferred to have been formed as a result of pre-peat paleotopographic depressions, syn-depositional faulting, fault-controlled pre-peat paleotopography, and from compaction beneath post-depositional channels and slumps. Although the association of thick coal with linear trends and inferred faults has been used in other basins to infer syn-depositional faulting, changes in palynology within increment samples of the seam along a structural ramp in this study provide

  8. The NASA POWER SSE: Deriving the Direct Normal Counterpart from the CERES SYN1deg Hourly Global Horizontal Irradiance during Early 2000 to Near Present

    Science.gov (United States)

    Zhang, T.; Stackhouse, P. W., Jr.; Westberg, D. J.

    2017-12-01

    The NASA Prediction of Worldwide Energy Resource (POWER) Surface meteorology and Solar Energy (SSE) provides solar direct normal irradiance (DNI) data as well as a variety of other solar parameters. The currently available DNIs are monthly means on a quasi-equal-area grid system with grid boxes roughly equivalent to 1 degree longitude by 1 degree latitude around the equator from July 1983 to June 2005, and the data were derived from the GEWEX Surface Radiation Budget (SRB) monthly mean global horizontal irradiance (GHI, Release 3) and regression analysis of the Baseline Surface Radiation Network (BSRN) data. To improve the quality of the DNI data and push the temporal coverage of the data to near present, we have applied a modified version of the DIRINDEX global-to-beam model to the GEWEX SRB (Release 3) all-sky and clear-sky 3-hourly GHI data and derived their DNI counterparts for the period from July 1983 to December 2007. The results have been validated against the BSRN data. To further expand the data in time to near present, we are now applying the DIRINDEX model to the Clouds and the Earth's Radiant Energy System (CERES) data. The CERES SYN1deg (Edition 4A) offers hourly all-sky and clear-sky GHIs on a 1 degree longitude by 1 degree latitude grid system from March 2000 to October 2016 as of this writing. Comparisons of the GHIs with their BSRN counterparts show remarkable agreements. Besides the GHIs, the inputs will also include the atmospheric water vapor and surface pressure from the Modern Era Retrospective-Analysis for Research and Applications (MERRA) and the aerosol optical depth from the Max-Planck Institute Climatology (MAC-v1). Based on the performance of the DIRINDEX model with the GEWEX SRB GHI data, we expect at least equally good or even better results. In this paper, we will show the derived hourly, daily, and monthly mean DNIs from the CERES SYN1deg hourly GHIs from March 2000 to October 2016 and how they compare with the BSRN data.

  9. Syn-collisional I-type Esenköy Pluton (Eastern Anatolia-Turkey): An indication for collision between Arabian and Eurasian plates

    Science.gov (United States)

    Açlan, Mustafa; Altun, Yusuf

    2018-06-01

    The Esenköy pluton which is situated in the East Anatolian Accretionary Complex (EACC) is represented by I-type, metalumino, calc-alkaline, VAG + syn-COLG, gabbro, diorite, quartz diorite, tonalite and granodiorite type rocks. This paper presents the characteristics of the above granitoids on their major, trace, rare earth elements (REE) and their zircon U-Pb dating. Zircon U-Pb crystallisation ages for gabbro, tonalite and granodiorite are 22.3 ± 0.2 Ma, 21.7 ± 0.2 Ma and 21.8 ± 0.2 Ma respectively. Esenköy granitoids show medium and high-K calc-alkaline character, with six exceptional K-poor sample plot in tholeiitic series field. The Rb/Y-Nb/Y diagram for Esenköy granitoids display subduction zone enrichment trend. The data which obtained from major, trace and REE geochemical characteristics and 206Pb/238U ages indicate that the collision which is take place between Arabian and Eurasian plates along the Bitlis-Zagros suture zone has begun in the Early Miocene (Aquitanian) or before from Early Miocene.

  10. Solvolysis of deuterium-labeled β-(syn-7-norbornenyl)ethyl p-bromobenzenesulfonates. Multiple cation automerizations in tight ion pairs

    International Nuclear Information System (INIS)

    Bly, R.S.; Bly, R.K.; Hamilton, J.B.; Jindal, S.P.

    1977-01-01

    The brosylates of α,α- 2 H 2 -, β,β- 2 H 2 -, and α,α,β,β- 2 H 4 -β-(syn-7-norbornenyl)ethanol have been prepared and solvolyzed at 25 0 C in buffered acetic acid, in buffered formic acid, and in buffered 90 percent acetone-water. The deuterated exo-2-brendyl and exo-4-brexyl derivatives produced in each case after a single hydrogen or deuterium shift have been converted to deuterated brendan-2-one and brexan-4-one mixtures and the position of the deuterium labels in each ketone determined mass spectrometrically. Comparison of the deuterium content of the brexan-4-one both before and after base-catalyzed exchange with protium permits analysis of the fractions of solvolysis product derived from each recognizably discrete rearranged cation. From these results it is clear that some hydrogen or deuterium migration occurs from each methylenic carbon of the starting brosylate and that 10 to 19 percent of those migrations are preceded by at least one Wagner--Meerwein automerization. It is suggested that the observed effect of the different solvents on the product distribution is due in part to ion pairing which affects the rate of transformations that change the net charge separation in the initial intermediate

  11. Episodic normal faulting and magmatism during the syn-spreading stage of the Baiyun sag in Pearl River Mouth Basin: response to the multi-phase seafloor spreading of the South China Sea

    Science.gov (United States)

    Deng, Peng; Mei, Lianfu; Liu, Jun; Zheng, Jinyun; Liu, Minghui; Cheng, Zijie; Guo, Fengtai

    2018-03-01

    Considerable post-breakup extensional deformation is recorded in the continental margins of the South China Sea (SCS). To recognize the nature and origin of the significant deformation during the syn-spreading stage (32-15.5 Ma) in the SCS, we comprehensively analyzed the geometry and kinematics of the faults and contemporaneous magmas in the Baiyun sag, northern margin of the SCS, using high-resolution regional three-dimensional seismic data. The kinematic analyses indicate that the faults in the Baiyun sag are recently formed following the onset of seafloor spreading in the SCS. The faults exhibit multiple episodes of growth history, with three active episodes, 32-29, 23.8-21 and 18.5-16.5 Ma, separated by periods of inactivity. Four volcanic groups comprising 98 volcanic mounds have been identified and described, located separately in the northwestern, the central, the southeastern and the northern slope areas. The occurrence of multiple palaeo-seafloors, complemented by the biostratigraphic and K-Ar dating data, reveals multiple extrusive events of the syn-spreading magmas in the Baiyun sag, with three active periods of 23.8-21, 18.5-17.5 and 17.5-16.5 Ma. This study confirms that the normal faulting has a shared genetic origin with the contemporaneous magmatism during the syn-spreading stage in the deep-offshore Baiyun sag, northern margin of the SCS. The episodic fault growth and magmatic extrusive events reveal that the Baiyun sag has undergone at least three episodic tectonic events during the syn-spreading stage, which evolved in response to the multi-stage seafloor spreading of the SCS.

  12. Nature, geochemistry and petrogenesis of the syn-tectonic Amspoort suite (Pan-African Boundary Igneous Complex, Kaoko Belt, NW Namibia)

    Science.gov (United States)

    Janousek, Vojtech; Konopasek, Jiri; Ulrich, Stanislav

    2010-05-01

    Crucial information on the Neoproterozoic-Cambrian amalgamation of Western Gondwana is provided by studies of the large Pan-African collisional belt in central-northern Namibia. This so-called Damara Orogen (Miller, 1983) can be subdivided into two branches, the SW-NE trending Damara Belt and a roughly perpendicular, NNW-SSE trending Kaoko Belt further north. The Kaoko Belt consists of two principal crustal units. The easterly part has a Congo Craton affinity (a basement built mostly by ≥ 1.5 Ga granitic gneisses with Neoproterozoic metasedimentary cover), whereas the westerly Coastal Terrane consists of Neoproterozoic (c.850-650 Ma) metapsammites and minor metabasic bodies; no exposures of the basement were found. The at least 180 km long, NNW-SSE trending suture between both units was intruded by numerous syn-tectonic magmatic bodies with ages spanning the interval 580-550 Ma (Seth et al., 1998; Kröner et al., 2004) designated as the Boundary Igneous Complex by Konopásek et al. (2008). The most typical representatives of this syn-collision igneous association are c.550 Ma old K-feldspar-phyric, Bt ± Cam granites-granodiorites of the Amspoort suite, with minor Cpx gabbro and rare two-pyroxene dolerite bodies. The petrological character, whole-rock geochemistry and Sr-Nd isotopic signatures of the scarce Opx-Cpx-Bt dolerites indicate an origin from a CHUR-like mantle-derived melts (87Sr/86Sr550 ~ 0.7045, ɛNd550 ~ 0) modified by extensive (?Ol-) Cpx fractionation. The rest of the suite is interpreted as a product of a high-temperature anatexis of a heterogeneous lower crust, built mainly by immature metapsammites - rich in arc-derived detritus - with minor metabasite and intermediate metaigneous bodies. The most likely source appears to be the anatectic Coastal Terrane gneisses. Yet, partial melting of the so far little constrained Congo Craton cover, if formed by immature and youthful detritus unrelated to the basement, cannot be discounted. In any case, the

  13. A new approach in the monitoring of the phytosanitary conditions of forests: the case of oak and beech stands in the Sicilian Regional Parks

    Directory of Open Access Journals (Sweden)

    Cinzia Rizza

    2016-10-01

    Full Text Available The objective of this study was to investigate the health conditions of oak and beech stands in the three Regional Parks of Sicily (Etna, Madonie and Nebrodi. A total of 81 sampling areas were investigated, 54 in oak stands and 27 in beech stands. The phytosanitary conditions of each tree within the respective sampling area was expressed with a synthetic index namely phytosanitary class (PC. Oak stands showed severe symptoms of decline, with 85% of the sampling areas including symptomatic trees. In general, beech stands were in better condition, with the exception of Nebrodi Park, where trees showed severe symptoms of decline. On oak trees, infections of fungal pathogens were also observed, including Biscogniauxia mediterranea, Polyporus sp., Fistulina hepatica, Mycrosphaera alphitoides and Armillaria sp. By contrast, on beech trees Biscogniauxia nummularia, Fomes fomentarius and Neonectria radicicola were recognized. Furthermore, twenty-two permanent sampling areas were delimited with the aim of monitoring regularly the health conditions of forests in these three parks.

  14. Analog modeling and kinematic restoration of inverted hangingwall synclinal basins developed above syn-kinematic salt: Application to the Lusitanian and Parentis basins

    Science.gov (United States)

    Roma, Maria; Vidal-Royo, Oskar; McClay, Ken; Ferrer, Oriol; Muñoz, Josep Anton

    2017-04-01

    The formation of hagingwall syncline basins is basically constrained by the geometry of the basement-involved fault, but also by salt distribution . The formation of such basins is common around the Iberian Peninsula (e.g. Lusitanian, Parentis, Basque-Cantabian, Cameros and Organyà basins) where Upper Triassic (Keuper) salt governed their polyphasic Mesozoic extension and their subsequent Alpine inversion. In this scenario, a precise interpretation of the sub-salt faults geometry and a reconstruction of the initial salt thickness are key to understand the kinematic evolution of such basins. Using an experimental approach (sandbox models) and these Mesozoic basins as natural analogues, the aim of this work is to: 1) investigate the main parameters that controlled the formation and evolution of hagingwall syncline basins analyzing the role of syn-kinematic salt during extension and subsequent inversion; and 2) quantify the deformation and salt mobilization based on restoration of analog model cross sections. The experimental results demonstrate that premature welds are developed by salt deflation with consequent upward propagation of the basal fault in salt-bearing rift systems with a large amount of extension,. In contrast, thicker salt inhibits the upward fault propagation, which results into a further salt migration and development of a hagingwall syncline basins flanked by salt walls. The inherited extensional architecture as well as salt continuity dramatically controlled subsequent inversion. Shortening initially produced the folding and the uplift of the synclinal basins. Minor reverse faults form as a consequence of overtightening of welded diapir stems. However, no trace of reverse faulting is found around diapirs stems, as ductile unit is still available for extrusion, squeezing and accommodation of shortening. Restoration of the sandbox models has demonstrated that this is a powerful tool to unravel the complex structures in the models and this may

  15. High-grade iron ore at Windarling, Yilgarn Craton: a product of syn-orogenic deformation, hypogene hydrothermal alteration and supergene modification in an Archean BIF-basalt lithostratigraphy

    Science.gov (United States)

    Angerer, Thomas; Hagemann, Steffen G.; Danyushevsky, Leonid

    2013-08-01

    Banded iron formation (BIF)-hosted iron ore deposits in the Windarling Range are located in the lower greenstone succession of the Marda-Diemals greenstone belt, Southern Cross domain, Yilgarn Craton and constitute a total hematite-martite-goethite ore resource of minimum 52 Mt at 60 wt.% Fe (0.07 P). Banded iron formation is interlayered with high-Mg basalts at Windarling and precipitated during episodes of volcanic quiescence. Trace element content and the rare earth element (REE) ratios Y/Ho (42 to 45), Sm/Yb (1.5), together with positive La and Gd anomalies in `least-altered' hematite-magnetite-metachert-BIF indicate the precipitation from Archean seawater that was fertilised by hydrothermal vent fluids with a basaltic HREE-Y signature. Hypogene iron ore in sub-greenschist facies metamorphosed BIF formed during three distinct stages: ore stage 1 was a syn- to post-metamorphic, syn-D1, Fe-Ca-Mg-Ni-Co-P-REE metasomatism that produced local Ni-REE-rich Fe-dolomite-magnetite alteration in BIF. Hydrothermal alteration was induced by hot fluid flow controlled by brittle-ductile reactivation of BIF-basalt margins and crosscutting D1 faults. The Ni-Co-rich content of dolomite and a shift in REE ratios in carbonate-altered BIF towards Archean mafic rock signature (Y/Ho to 31 to 40, Sm/Yb to 1 to 2 and Gd/Gd* to 1.2 to 1.4) suggest that high-Mg basalts in the Windarling Range were the primary source of introduced metals. During ore stage 2, a syn-deformational and likely acidic and oxidised fluid flow along BIF-basalt margins and within D1 faults leached carbonate and precipitated lepidoblastic and anhedral/granoblastic hematite. High-grade magnetite-hematite ore is formed during this stage. Ore stage 3 hydrothermal specular hematite (spcH)-Fe-dolomite-quartz alteration was controlled by a late-orogenic, brittle, compressional/transpressional stage (D4; the regional-scale shear-zone-related D3 is not preserved in Windarling). This minor event remobilised iron oxides

  16. Diversity and antifungal activity of the endophytic fungi associated with the native medicinal cactus Opuntia humifusa (Cactaceae) from the United States.

    Science.gov (United States)

    Silva-Hughes, Alice F; Wedge, David E; Cantrell, Charles L; Carvalho, Camila R; Pan, Zhiqiang; Moraes, Rita M; Madoxx, Victor L; Rosa, Luiz H

    2015-06-01

    The endophytic fungal community associated with the native cactus Opuntia humifusa in the United States was investigated and its potential for providing antifungal compounds. A hundred-eight endophytic fungal isolates were obtained and identified by molecular methods into 17 different taxa of the genera Alternaria, Aureobasidium, Biscogniauxia, Cladosporium, Cryptococcus, Curvularia, Diaporthe, Epicoccum, Paraconiothyrium, Pestalotiopsis and Phoma. The most frequent species associated with O. humifusa were Alternaria sp. 3, Aureobasidium pullulans and Diaporthe sp. The fungal community of O. humifusa had a high richness and diversity; additionally, the species richness obtained indicates that the sample effort was enough to recover the diversity pattern obtained. Six extracts of endophytes showed antifungal properties and (1)H NMR analyses of the extracts of Alternaria sp. 5 Ohu 8B2, Alternaria sp. 3 Ohu 30A, Cladosporium funiculosum Ohu 17C1 and Paraconiothyrium sp. Ohu 17A indicated the presence of functional groups associated with unsaturated fatty-acid olefinic protons and fatty acid methylene and methyl protons. GC-FID analysis of these extracts confirmed the presence of a mixture of different fatty acids. The (1)H NMR analyses of Biscogniauxia mediterranea Ohu 19B extracts showed the presence of aromatic compounds. From the extract of B. mediterranea we isolated the compound 5-methylmellein that displayed moderate antifungal activity against the phytopathogenic fungi Phomopsis obscurans. Our results suggest that native medicinal cacti of the United States can live symbiotically with rich and diverse endophytic communities and may be a source of bioactive molecules, including those able to inhibit or control plant disease pathogens. Copyright © 2015 Elsevier GmbH. All rights reserved.

  17. Syn på sensation

    DEFF Research Database (Denmark)

    Svendsen, Jesper Tinggaard

    2010-01-01

      Underlødig, uvederhæftig, fræk, underholdende. Sensationspressen i Danmark har over 100 år på bagen og er i form af Ekstra Bladet og BT i dag en velkendt og relativt genrestabil størrelse, som de fleste har en holdning til. Dette gælder også vores uddannelsesinstitutioner. Betragter vi fx, hvor...

  18. Syn-eruptive, soft-sediment deformation of deposits from dilute pyroclastic density current: triggers from granular shear, dynamic pore pressure, ballistic impacts and shock waves

    Science.gov (United States)

    Douillet, G. A.; Taisne, B.; Tsang-Hin-Sun, E.; Muller, S. K.; Kueppers, U.; Dingwell, D. B.

    2015-05-01

    Soft-sediment deformation structures can provide valuable information about the conditions of parent flows, the sediment state and the surrounding environment. Here, examples of soft-sediment deformation in deposits of dilute pyroclastic density currents are documented and possible syn-eruptive triggers suggested. Outcrops from six different volcanoes have been compiled in order to provide a broad perspective on the variety of structures: Soufriere Hills (Montserrat), Tungurahua (Ecuador), Ubehebe craters (USA), Laacher See (Germany), and Tower Hill and Purrumbete lakes (both Australia). The variety of features can be classified in four groups: (1) tubular features such as pipes; (2) isolated, laterally oriented deformation such as overturned or oversteepened laminations and vortex-shaped laminae; (3) folds-and-faults structures involving thick (>30 cm) units; (4) dominantly vertical inter-penetration of two layers such as potatoids, dishes, or diapiric flame-like structures. The occurrence of degassing pipes together with basal intrusions suggest fluidization during flow stages, and can facilitate the development of other soft-sediment deformation structures. Variations from injection dikes to suction-driven, local uplifts at the base of outcrops indicate the role of dynamic pore pressure. Isolated, centimeter-scale, overturned beds with vortex forms have been interpreted to be the signature of shear instabilities occurring at the boundary of two granular media. They may represent the frozen record of granular, pseudo Kelvin-Helmholtz instabilities. Their recognition can be a diagnostic for flows with a granular basal boundary layer. Vertical inter-penetration and those folds-and-faults features related to slumps are driven by their excess weight and occur after deposition but penecontemporaneous to the eruption. The passage of shock waves emanating from the vent may also produce trains of isolated, fine-grained overturned beds that disturb the surface bedding

  19. Elementi di Icnografia mediterranea (Protonuraghi a camera naviforme

    Directory of Open Access Journals (Sweden)

    Manca Demurtas, Lucia

    1991-12-01

    Full Text Available Not available

    Definimos como protonuraghi con cámara «naviforme» aquellos nuraghi caracterizados por un corredor o espacio principal que, por ampliación de las paredes laterales, se transforma en cámara Esta presenta la parte posterior en forma de ábside semicircular y la cubierta en ojiva. El tipo, ya examinado por nosotros en el ámbito de un análisis general, aunque preliminar, sobre los protonuraghi, parece, por el momento, preludiar. en una propuesta de evolución arquitectónica, al nuraghe en tholos. Nuestro análisis no intenta fijar los puntos cronológicos en el interior del paso evolutivo aunque parece presumible que la creación y la difusión de este tipo de monumento pueda encuadrarse entre el Bronce antiguo y el Bronce medio teniendo en cuenta también los datos materiales adquiridos hasta ahora. Aunque sin infravalorar un posible aporte externo en la definición del tholos, parece igualmente evidente que la aceptación de tal modelo arquitectónico no pudo ser tan contrastante con la experiencia ya adquirida. [it] Definiamo protonuraghi con camera «naviforme» quei nuraghi il cui elemento caratterizzante è il corridoio o spazio principale che per l'ampliamento delle pareti laterali si muta in camera. Essa presenta la parte posteriore in forma di abside semicircolare e la copertura ad ogiva . II tipo, da noi giii preso in esame nell'ambito di un'analisi generale, seppure preliminare, sui protonuraghi, sembrerebbe, al momento, preludere, in una proposta di evoluzione architettonica, al nuraghe a tholos. La nostra analisi esula dall'intento di fissare dei punti cronologici all'interno del passaggio evolutivo anche se appare presumibile che la creazione e la diffusione di questo tipo di monumento possa inquadrarsi tra il Bronzo antieo e il Bronzo medio tenendo conto anche dei dati materiali fin' ora acquisiti. Anche non sottovalutando un possibile apporto estemo nel definirsi della tholos, appare altrettanto evidente che l'accettazione di tale modulo architettonico non puó essere casi contrastante con le esperienze gia acquisite.

  20. Neoblast Specialization in Regeneration of the Planarian Schmidtea mediterranea

    Directory of Open Access Journals (Sweden)

    M. Lucila Scimone

    2014-08-01

    Full Text Available Planarians can regenerate any missing body part in a process requiring dividing cells called neoblasts. Historically, neoblasts have largely been considered a homogeneous stem cell population. Most studies, however, analyzed neoblasts at the population rather than the single-cell level, leaving the degree of heterogeneity in this population unresolved. We combined RNA sequencing of neoblasts from wounded planarians with expression screening and identified 33 transcription factors transcribed in specific differentiated cells and in small fractions of neoblasts during regeneration. Many neoblast subsets expressing distinct tissue-associated transcription factors were present, suggesting candidate specification into many lineages. Consistent with this possibility, klf, pax3/7, and FoxA were required for the differentiation of cintillo-expressing sensory neurons, dopamine-β-hydroxylase-expressing neurons, and the pharynx, respectively. Together, these results suggest that specification of cell fate for most-to-all regenerative lineages occurs within neoblasts, with regenerative cells of blastemas being generated from a highly heterogeneous collection of lineage-specified neoblasts.

  1. Mediterranea Forecasting System: a focus on wave-current coupling

    Science.gov (United States)

    Clementi, Emanuela; Delrosso, Damiano; Pistoia, Jenny; Drudi, Massimiliano; Fratianni, Claudia; Grandi, Alessandro; Pinardi, Nadia; Oddo, Paolo; Tonani, Marina

    2016-04-01

    The Mediterranean Forecasting System (MFS) is a numerical ocean prediction system that produces analyses, reanalyses and short term forecasts for the entire Mediterranean Sea and its Atlantic Ocean adjacent areas. MFS became operational in the late 90's and has been developed and continuously improved in the framework of a series of EU and National funded programs and is now part of the Copernicus Marine Service. The MFS is composed by the hydrodynamic model NEMO (Nucleus for European Modelling of the Ocean) 2-way coupled with the third generation wave model WW3 (WaveWatchIII) implemented in the Mediterranean Sea with 1/16 horizontal resolution and forced by ECMWF atmospheric fields. The model solutions are corrected by the data assimilation system (3D variational scheme adapted to the oceanic assimilation problem) with a daily assimilation cycle, using a background error correlation matrix varying seasonally and in different sub-regions of the Mediterranean Sea. The focus of this work is to present the latest modelling system upgrades and the related achieved improvements. In order to evaluate the performance of the coupled system a set of experiments has been built by coupling the wave and circulation models that hourly exchange the following fields: the sea surface currents and air-sea temperature difference are transferred from NEMO model to WW3 model modifying respectively the mean momentum transfer of waves and the wind speed stability parameter; while the neutral drag coefficient computed by WW3 model is passed to NEMO that computes the turbulent component. In order to validate the modelling system, numerical results have been compared with in-situ and remote sensing data. This work suggests that a coupled model might be capable of a better description of wave-current interactions, in particular feedback from the ocean to the waves might assess an improvement on the prediction capability of wave characteristics, while suggests to proceed toward a fully coupled modelling system in order to achieve stronger enhancements of the hydrodynamic fields.

  2. The head-regeneration transcriptome of the planarian Schmidtea mediterranea

    Science.gov (United States)

    2011-01-01

    Background Planarian flatworms can regenerate their head, including a functional brain, within less than a week. Despite the enormous potential of these animals for medical research and regenerative medicine, the mechanisms of regeneration and the molecules involved remain largely unknown. Results To identify genes that are differentially expressed during early stages of planarian head regeneration, we generated a de novo transcriptome assembly from more than 300 million paired-end reads from planarian fragments regenerating the head at 16 different time points. The assembly yielded 26,018 putative transcripts, including very long transcripts spanning multiple genomic supercontigs, and thousands of isoforms. Using short-read data from two platforms, we analyzed dynamic gene regulation during the first three days of head regeneration. We identified at least five different temporal synexpression classes, including genes specifically induced within a few hours after injury. Furthermore, we characterized the role of a conserved Runx transcription factor, smed-runt-like1. RNA interference (RNAi) knockdown and immunofluorescence analysis of the regenerating visual system indicated that smed-runt-like1 encodes a transcriptional regulator of eye morphology and photoreceptor patterning. Conclusions Transcriptome sequencing of short reads allowed for the simultaneous de novo assembly and differential expression analysis of transcripts, demonstrating highly dynamic regulation during head regeneration in planarians. PMID:21846378

  3. U-Th-PbT Monazite Gechronology in the South Carpathian Basement: Variscan Syn-Metamorphic Tectonic Stacking and Long-Lasting Post-Peak Decompressional Overprints

    Science.gov (United States)

    Săbău, G.; Negulescu, E.

    2012-12-01

    -tuned by comparison with the general probability function calculated from all individual age and error values. Monazite chemical compositions and variations, in connection with the textural and zonal setting of the analyzed spots, were used to estimate the geological relevance of the derived age clusters, along with inter-sample comparisons anchored on granitoid samples displaying well-expressed age plateaus, conspicuously related to consolidation and emplacement ages. The resultant ages are consistent with sandwiching of juvenile Variscan metamorphic units and slivers of reworked older basement fragments in structurally coherent sequences, formed by syn/late-metamorphic tectonic stacking. Differential exhumation and ensuing areal or local lower pressure overprinting initiated in early Permian lasted up until the Late Jurassic. The age distribution of the pervasive metamorphic overprints, in consistency with the variation of the metamorphic conditions recorded, requires a partial revision and an iterative adjustment between determined ages and metamorphic features, and the lithostratigraphic separations operated in several basement units of the South Carpathians. Acknowledgements Grant PN-II-ID-PCE-2011-3-0030 by the Romanian Executive Unit for Financing Higher Education, Research, Development and Innovation (UEFISCDI)

  4. Kinematics of syn- and post-exhumational shear zones at Lago di Cignana (Western Alps, Italy): constraints on the exhumation of Zermatt-Saas (ultra)high-pressure rocks and deformation along the Combin Fault and Dent Blanche Basal Thrust

    Science.gov (United States)

    Kirst, Frederik; Leiss, Bernd

    2017-01-01

    Kinematic analyses of shear zones at Lago di Cignana in the Italian Western Alps were used to constrain the structural evolution of units from the Piemont-Ligurian oceanic realm (Zermatt-Saas and Combin zones) and the Adriatic continental margin (Dent Blanche nappe) during Palaeogene syn- and post-exhumational deformation. Exhumation of Zermatt-Saas (U)HP rocks to approximately lower crustal levels at ca. 39 Ma occurred during normal-sense top-(S)E shearing under epidote-amphibolite-facies conditions. Juxtaposition with the overlying Combin zone along the Combin Fault at mid-crustal levels occurred during greenschist-facies normal-sense top-SE shearing at ca. 38 Ma. The scarcity of top-SE kinematic indicators in the hanging wall of the Combin Fault probably resulted from strain localization along the uppermost Zermatt-Saas zone and obliteration by subsequent deformation. A phase of dominant pure shear deformation around 35 Ma affected units in the direct footwall and hanging wall of the Combin Fault. It is interpreted to reflect NW-SE crustal elongation during updoming of the nappe stack as a result of underthrusting of European continental margin units and the onset of continental collision. This phase was partly accompanied and followed by ductile bulk top-NW shearing, especially at higher structural levels, which transitioned into semi-ductile to brittle normal-sense top-NW deformation due to Vanzone phase folding from ca. 32 Ma onwards. Our structural observations suggest that syn-exhumational deformation is partly preserved within units and shear zones exposed at Lago di Cignana but also that the Combin Fault and Dent Blanche Basal Thrust experienced significant post-exhumational deformation reworking and overprinting earlier structures.

  5. VALOR NUTRICIO Y CONTENIDO DE SAPONINAS EN GERMINADOS DE HUAUZONTLE (Chenopodium nuttalliae Saff., CALABACITA (Cucurbita pepo L., CANOLA (Brassica napus L. Y AMARANTO (Amaranthus leucocarpus S. Watson syn. hypochondriacus L.

    Directory of Open Access Journals (Sweden)

    M. R. Barrón-Yánez

    2009-01-01

    (Brassica napus L. y amaranto (Amaranthus leucocarpus S. Watson syn. hypochondriacus L.. Se realizó un análisis proximal y la cuantificación de saponinas en semillas y germinados de las cuatro especies. El contenido de proteína fue más alto en los germinados de canola que en las semillas, pero en huauzontle, calabacita y amaranto no varió. El contenido de lípidos en las semillas de canola, huauzontle y amaranto disminuyó en sus germinados, pero se incrementó en calabacita. El contenido de saponinas en los germinados fue de 2,873.23 en huauzontle, 155.40 en calabacita, 429.81 en canola, y 491.45 mg 100·g-1 de peso seco en amaranto. El contenido de saponinas en semillas fue de 5280.57, 0.00, 35.77 y 42.84 mg 100·g-1 en peso seco, respectivamente. Los niveles del contenido de saponinas en semillas y germinados para las cuatro especies estudiadas no representan toxicidad para humanos. El valor nutricio fue mejor en el germinado de canola que en el de huauzontle, calabaza y amaranto. El sabor de los germinados de huauzontle y amaranto fue mejor que en los de canola y calabacita.

  6. Spectroscopic (IR, NMR) and conductometric characterization of lithium aluminum hydride - crown ethers complexes [Li{sup +}-C E](A I H{sub 4})- with C E=syn-isomers of DC 18-C-6 in benzene solutions; Caracterisation par spectrometrie (IR, RMN) et conductimetrie des complexes entre le tetrahydrualuminate de lithium LiAIH{sub 4} et l`ether-couronne DC 18-C-6* (isomeres cis-anti-cis et cis-syn-cis) en solution dans le benzene (*2,3,11,12-dicyclohexano-1,4,7,10,13,16-hexacyclooctadecane)

    Energy Technology Data Exchange (ETDEWEB)

    Bastide, J P; Ezzemouri, K; Carre, J; Bouamrane, A; Claudy, P [Institut National des Sciences Appliquees (INSA), 69 - Villeurbanne (France); Frange, B [Faculte des Sciences, 21 - Dijon (France)

    1996-03-01

    [Li{sup +}-C E](AIH{sub 4}){sup -} complexes with C E = syn and anti-isomers of the crown ether DC 18-C-6 have been characterized in benzene solutions by IR (infrared spectroscopy), NMR (nuclear magnetic resonance) and conductometry (at 298 K). The properties of these complexes are closely related to those of the cation [Li{sup +}-C E]. For the anti-isomer, no distortion of the macrocycle was noticed after complexation, the Li{sup +} trapped cation is coordinated with four oxygen atoms of the cavity, and the complex exhibits a covalent behavior. Electrical conductivity of the benzene solution is concentration independent and has a very low mean value ({lambda} = 0,06 {omega}{sup -1}.cm{sup 2}.mol{sup -1}). The macrocycle of the syn-isomer is drastically distorted after complexation. A tridimensional cavity is formed, in which the Li{sup +} trapped cation is coordinated with six oxygen atoms. As a consequence, the species exhibits a high degree of ionic character due to the stretching of the Li{sup +}---(AIH{sub 4}){sup -} bond. Electrical conductivity is enhanced for dilute solutions (x 10 at C 0,01 mol.L{sup -1}). The regular tetrahedral symmetry of (AIH{sub 4}){sup -} anion is retained in the molecular structure of the two complexes. Benzene solutions of [Li-+-syn-DC 18-C-6](AIH{sub 4}){sup -} appear to be the first example of free-(AIH{sub 4}){sup -} anions in a non-polar organic medium. (authors). 22 refs., 3 figs., 4 tabs.

  7. Interactions between Ethanol, syn-2,3-Hexanediol, 3-Hydroxyhexan-2-one, and 3-Hydroxyoctan-2-one Lures on Trap Catches of Hardwood Longhorn Beetles in Southeastern United States.

    Science.gov (United States)

    Miller, D R; Crowe, C M; Mayo, P D; Reid, L S; Silk, P J; Sweeney, J D

    2017-10-01

    The effectiveness of a four-component "super lure" consisting of ethanol (E) and the cerambycid pheromones syn-2,3-hexanediol (D6), racemic 3-hydroxyhexan-2-one (K6), and racemic 3-hydroxyoctan-2-one (K8) on trap catches of Cerambycidae (Coleoptera) was determined in southeast United States with seven trapping experiments in 2011-2013. We captured 74 species of longhorn beetles in our three-year study. Ethanol significantly increased the mean catches of seven species and increased the number of cerambycid species detected. Traps with the "super lure" were effective for 8 of 13 species of Cerambycidae previously shown to be attracted to binary combinations of ethanol plus one of the three pheromones. However, the "super lure" was less effective for the remaining five species with catch reductions of 40-90% compared with combinations of ethanol and one or two of the pheromones. For example, K6 + K8 lures reduced catches of Anelaphus villosus (F.) in traps with E + D6 by 90%. Similarly, catches of Anelaphus pumilus (Newman) in traps with E + K6 + D6 were reduced by 50% with the addition of K8. Catches of Knulliana cincta (Drury) in traps with K6 + K8 lures were interrupted by D6, an effect negated by the addition of ethanol. Given the interruptive effects on trap catches of some species when lures are combined in a single trap, developing optimal lure blends to maximize detection efficacy will be a challenge for managers of detection programs for non-native invasive species of longhorn beetles. Published by Oxford University Press on behalf of Entomological Society of America 2017. This work is written by (a) US Government employee(s) and is in the public domain in the US.

  8. A phase 1 study of a group B meningococcal native outer membrane vesicle vaccine made from a strain with deleted lpxL2 and synX and stable expression of opcA.

    Science.gov (United States)

    Keiser, Paul B; Gibbs, Barnett T; Coster, Trinka S; Moran, E Ellen; Stoddard, Mark B; Labrie, Joseph E; Schmiel, Deborah H; Pinto, Valerian; Chen, Ping; Zollinger, Wendell D

    2010-10-08

    This phase 1 clinical trial assessed the safety and immunogenicity of a native outer membrane vesicle (NOMV) vaccine prepared from a lpxL2(-) synX(-) mutant of strain 44/76 with opcA expression stabilized. Thirty-four volunteers were assigned to one of the three dose groups (25 mcg, 25 mcg with aluminum hydroxide adjuvant, and 50 mcg) to receive three intramuscular injections at 0, 6 and 24 weeks. Specific local and systemic adverse events (AEs) were solicited by diary and at visits on days 1, 2, 7 and 14 after each vaccination and at the end of the study at 30 weeks. Blood chemistries, complete blood count, and coagulation studies were measured on each vaccination day and again two days later. Blood for antibody measurements and bactericidal assays were drawn 0, 14, and 42 days after each vaccination. The proportion of volunteers who developed a fourfold or greater increase in serum bactericidal activity (SBA) to the wild-type parent of the vaccine strain with high opcA expression at 6 weeks after the third dose was 12/26 (0.46, 95% confidence interval 0.27-0.65). Antibody levels to OpcA were significantly higher in vaccine responders than in non-responders (p=0.008), and there was a trend for higher antibody levels to the lipooligosaccharide (LOS) (p=0.059). Bactericidal depletion assays on sera from volunteers with high-titer responses also indicate a major contribution of anti-OpcA and anti-LOS antibodies to the bactericidal response.These results suggest that genetically modified NOMV vaccines can induce protection against group B meningococcus. Copyright © 2010 Elsevier Ltd. All rights reserved.

  9. Rapport om DanDiaSyn-projektet

    DEFF Research Database (Denmark)

    Jørgensen, Henrik; Hagedorn, Karen

    2009-01-01

    Artiklen gør rede for hovedprincipperne bag det indsamlingsarbejde om dansk dialektsyntaks som forfatterne deltog i 2007-9......Artiklen gør rede for hovedprincipperne bag det indsamlingsarbejde om dansk dialektsyntaks som forfatterne deltog i 2007-9...

  10. Gymnasieelevers syn på influencers

    OpenAIRE

    Storbacka, Carl-Anton Storbacka; Jahn, Aron

    2017-01-01

    Influencer marketing has arguably emerged as one of the most effective forms of marketing, and it’s here to stay. That has made influencer marketing just as compelling of a research subject as it is useful for marketing professionals. This thesis aims to put an answer to how high school students experience influencer marketing across social media and how they feel it affect their buying intentions. The data that this study relies on is extracted from an opinion poll, the results of that surve...

  11. KIN17, XPC, DNA-PKCS and XRCC4 proteins in the cellular response to DNA damages. Relations between nucleotide excision repair and non-homologous end joining in a human syn-genic model

    International Nuclear Information System (INIS)

    Despras, Emmanuelle

    2006-01-01

    The response to genotoxic stress involves many cellular factors in a complex network of mechanisms that aim to preserve the genetic integrity of the organism. These mechanisms enclose the detection and repair of DNA lesions, the regulation of transcription and replication and, eventually, the setting of cell death. Among the nuclear proteins involved in this response, kin17 proteins are zinc-finger proteins conserved through evolution and activated by ultraviolet (UV) or ionizing radiations (IR). We showed that human kin17 protein (HSAkin17) is found in the cell under a soluble form and a form tightly anchored to nuclear structures. A fraction of HSAkin17 protein is directly associated with chromatin. HSAkin17 protein is recruited to nuclear structures 24 hours after treatment with various agents inducing DNA double-strand breaks (DSB) and/or replication forks blockage. Moreover, the reduction of total HSAkin17 protein level sensitizes RKO cells to IR. We also present evidence for the involvement of HSAkin17 protein in DNA replication. This hypothesis was further confirmed by the biochemical demonstration of its belonging to the replication complex. HSAkin17 protein could link DNA replication and DNA repair, a defect in the HSAkin17 pathway leading to an increased radiosensitivity. In a second part, we studied the interactions between two DNA repair mechanisms: nucleotide excision repair (NER) and non-homologous end joining (NHEJ). NER repairs a wide variety of lesions inducing a distortion of the DNA double helix including UV-induced pyrimidine dimers. NHEJ allows the repair of DSB by direct joining of DNA ends. We used a syn-genic model for DNA repair defects based on RNA interference developed in the laboratory. Epstein-Barr virus-derived vectors (pEBV) allow long-term expression of siRNA and specific extinction of the targeted gene. The reduction of the expression of genes involved in NER (XPA and XPC) or NHEJ (DNA-PKcs and XRCC4) leads to the expected

  12. UN MODELLO TEORICO PER LA VALORIZZAZIONE DEL PAESAGGIO CULTURALE DELLA DIETA MEDITERRANEA

    Directory of Open Access Journals (Sweden)

    Tiziana Meduri

    2015-12-01

    Full Text Available The study aims to identify guidelines for defining a model of cultural planning oriented to the development of the emerging sector of the territory of Reggio Calabria’s metropolitan city, specifically rural areas, to provide an integrated plan of development of cultural identity. The methodology consisted of a preliminary fact-finding investigation. This has lead to, in theory, an operating model where it is proved that the first action to be performed is the accurate identification of an effective tool that can be applied to the province towed to the emergence and local development: the Mediterranean diet. The second step involved the selection of municipalities able to apply the best practices in the area for the promotion of the Mediterranean Diet. Through a checklist, formulated ad hoc, is checked for quality valorization plans that each municipality must prepare. What you intend to prove is that a careful and participatory cultural program could be the possible way out from the narrow vision of culture as a marginal aspect of economic life and in fact placed in the policies of socio-economic development of the territory.

  13. LA DIETA MEDITERRANEA UNESCO. UN MODELLO DI SVILUPPO SOSTENIBILE TRA MITO E REALTÀ

    Directory of Open Access Journals (Sweden)

    Elisabetta Moro

    2016-06-01

    Full Text Available This paper deals with the Mediterranean Diet as a potential tool for increasing knowledge and promoting a sustainable development especially in least developed and developing regions. The confirmation of the MD as an Intangible Heritage of Humanity, recognized by UNESCO in 2010, is producing a significant social effect in the seven nations and communities involved. In addition in 2012 the MD has been included by the FAO at the top of the list of the most sustainable diets in the planet. The double recognition of this life style is generating a new approach to this cultural heritage by the stakeholders who are progressively recognizing that it may become a new tool to develop green economy and eco-tourism. To this end the author analyses the real and mythological genealogy of the MD in order to bring out its cultural, economic and social potentiality.

  14. UN MODELLO APPLICATIVO PER LA VALORIZZAZIONE DEL PAESAGGIO CULTURALE DELLA DIETA MEDITERRANEA

    Directory of Open Access Journals (Sweden)

    Giuseppina Cassalia

    2015-12-01

    Full Text Available This paper aims to present a research project, where the Mediterranean Diet, according to a multidisciplinary reading, becomes an opportunity and a valuable tool for the sustainable growth of the Inner Areas. The goal is to contribute to the development of the inner areas of the Metropolitan City of Reggio Calabria and the methodology is based on the definition of a tool that allows the iden- tification of the correct assets of knowledge, planning and evaluation oriented towards the development of territorial resources. The scope is to present a model able to help in enhancing the contexts of local products, preserving the “tangible” elements that make up this ”intangible” lifestyle named Mediterranean Diet, in order to produce specific effective impacts on territories and communities.

  15. NMR structural studies of the ionizing radiation adduct 7-hydro-8-oxodeoxyguanosine (8-oxo-7H-dG) opposite deoxyadenosine in a DNA duplex. 8-oxo-7H-dG(syn)·dA(anti) alignment at lesion site

    International Nuclear Information System (INIS)

    Kouchakdjian, M.; Patel, D.J.; Bodepudi, V.; Shibutani, S.; Eisenberg, M.; Johnson, F.; Grollman, A.P.

    1991-01-01

    Proton NMR studies are reported on the complementary d(C1-C2-A3-C4-T5-A6-oxo-G7-T8-C9-A10-C11-C12)·d(G13-G14-T15-G16-A17-A18-T19-A20-G21-T22-G23-G24) dodecanucleotide duplex (designated 8-oxo-7H-dG·dA 12-mer), which contains a centrally located 7-hydro-8-oxodeoxyguanosine (8-oxo-7H-dG) residue, a group commonly found in DNA that has been exposed to ionizing radiation or oxidizing free radicals. From the NMR spectra it can be deduced that this moiety exists as two tautomers, or gives rise to two DNA conformations, that are in equilibrium and that exchange slowly. The present study focuses on the major component of the equilibrium that originates in the 6,8-dioxo tautomer of 8-oxo-7H-dG. The authors have assigned the exchangeable NH1, NH7, and NH 2 -2 base protons located on the Watson-Crick and Hoogsteen edges of 8-oxo-7H-dG7 in the 8-oxo-7H-dG·dA 12-mer duplex, using an analysis of one- and two-dimensional nuclear Overhauser enhancement (NOE) data in H 2 O solution. They were able to detect a set of intra- and interstrand NOEs between protons (exchangeable and nonexchangeable) on adjacent residues in the d(A6-oxo-G7-T8)·d(A17-A18-T19) trinucleotide segment centered about the lesion site that establishes stacking of the oxo-dG7(syn)·dA(anti) pair between stable Watson-Crick dA6·dT19 and dT8·A17 base pairs with minimal perturbation of the helix. The structural studies demonstrate that 8-oxo-7H-dG(syn)·dA(anti) forms a stable pair in the interior of the helix, providing a basis for the observed incorporation of dA opposite 8-oxo-7H-dG when readthrough occurs past this oxidized nucleoside base

  16. A phase 1 study of a meningococcal native outer membrane vesicle vaccine made from a group B strain with deleted lpxL1 and synX, over-expressed factor H binding protein, two PorAs and stabilized OpcA expression.

    Science.gov (United States)

    Keiser, P B; Biggs-Cicatelli, S; Moran, E E; Schmiel, D H; Pinto, V B; Burden, R E; Miller, L B; Moon, J E; Bowden, R A; Cummings, J F; Zollinger, W D

    2011-02-04

    This phase I clinical trial assessed the safety and immunogenicity of a native outer membrane vesicle (NOMV) vaccine prepared from an lpxL1(-) synX(-) mutant of strain 8570(B:4:P1.19,15:L8-5) of Neisseria meningitidis. Additional mutations enhance the expression of factor H binding protein variant 1 (fHbp v.1), stabilize expression of OpcA and introduce a second PorA (P1.22,14). Thirty-six volunteers were assigned to one of four dose groups (10, 25, 50 and 75 mcg, based on protein content) to receive three intramuscular injections at six week intervals with aluminum hydroxide adjuvant. Specific local and systemic adverse events were solicited by diary and at visits on days 2, 7, and 14 after each vaccination. Blood chemistries, complete blood count, and coagulation studies were measured on each vaccination day and again 2 and 14 days later. Blood for ELISA and serum bactericidal assays was drawn two and six weeks after each vaccination. The proportion of volunteers who developed a fourfold or greater increase in bactericidal activity to the wild type parent of the vaccine strain at two weeks after the third dose was 27 out of 34 (0.79, 95% C.I. 0.65-0.93). Against four other group B strains the response rate ranged from 41% to 82% indicating a good cross reactive antibody response. Depletion assays show contributions to bactericidal activity from antibodies to lipooligosaccharide (LOS), fHbp v.1 and OpcA. Published by Elsevier Ltd.

  17. Danske elevers oplevelser af og syn på udeskole

    DEFF Research Database (Denmark)

    Mygind, Lærke; Ejbye-Ernst, Niels; Bentsen, Peter

    2016-01-01

    Denne artikel er målrettet lærere, pædagoger og skoleledere, der arbejder eller vil i gang med at arbejde med udeskole. Artiklen byder på en indsigt i udeskole-vante elevers perspektiver på udeskole og bidrager således til henholdsvis at understøtte og underminere de forestillinger, som lærere...

  18. Genomet og syns- og høresansen

    DEFF Research Database (Denmark)

    Tranebjærg, Lisbeth; Rendtorff, Nanna Dahl; Brøndum-Nielsen, Karen

    2014-01-01

    The article briefly reviews the impact of genetics and genomics in audiology and ophthalmology, respectively. The discovery of an increasing number of genes associated with hearing and visual impairment creates a foundation for a better understanding of pathophysiology, eventually leading to novel...

  19. Genomet og syns- og høresansen

    DEFF Research Database (Denmark)

    Tranebjærg, Lisbeth; Rendtorff, Nanna Dahl; Brøndum-Nielsen, Karen

    2014-01-01

    The genome in terms of audiology and ophthalmology The article briefly reviews the impact of genetics and genomics in audiology and ophthalmology, respectively. The discovery of an increasing number of genes associated with hearing and visual impairment creates a foundation for a better understan......The genome in terms of audiology and ophthalmology The article briefly reviews the impact of genetics and genomics in audiology and ophthalmology, respectively. The discovery of an increasing number of genes associated with hearing and visual impairment creates a foundation for a better...... understanding of pathophysiology, eventually leading to novel and more individualized treatments. Furthermore, genetic evaluation and counselling can contribute to molecular diagnosis, better prognostication, and mode of inheritance. Next Generation Sequencing is a technology well suited to dissect the vast...

  20. Genomet og syns- og høresansen

    DEFF Research Database (Denmark)

    Tranebjærg, Lisbeth; Rendtorff, Nanna Dahl; Brøndum-Nielsen, Karen

    2014-01-01

    and more individualized treatments. Furthermore, genetic evaluation and counselling can contribute to molecular diagnosis, better prognostication, and mode of inheritance. Next generation sequencing is a technology well suited to dissect the vast genetic heterogeneity in these conditions....

  1. strain partitioning and dimensional preferred orientation in a syn

    African Journals Online (AJOL)

    Administrator

    matrix is a subject that has received much attention either by way of theoretical ..... (parallel to б2 direction) is prevented by the lithostatic load (ρgz- Pf). – which is quite .... Kamb, W. B. (1959) Theory of preferred crystal orientation developed by ...

  2. Species boundaries and nomenclature of Rhizopus arrhizus (syn. R. oryzae)

    NARCIS (Netherlands)

    Dolatabadi, Somayeh; de Hoog, G Sybren; Meis, Jacques F; Walther, Grit

    2014-01-01

    Rhizopus arrhizus (Mucorales, Mucoromycotina) is the prevalent opportunist worldwide among the mucoralean species causing human infections. On the other hand the species has been used since ancient times to ferment African and Asian traditional foods and condiments based on ground soybeans. As

  3. Revisortilsynets og FSR - danske revisorers syn

    DEFF Research Database (Denmark)

    Hartmann, Stig; Haraszuk, Anni

    2013-01-01

    Artiklen er baseret på interview med følgende: Christel Maria Thousing og Mette Banke-Eriksen, chefkonsulenterne i sekretariatet for Revisortilsynet samt Anders Bisgaard, medlem af FSR - danske revisorers Revisionstekniske udvalg....

  4. Lärarens syn kring elevers motivation till matematiken

    OpenAIRE

    Matti, Nuha

    2014-01-01

    This survey is a case study with the purpose to find out the teacher´s perceptions about students´ motivation to mathematics. Further this study aims for the teacher´s vision on how they consider students´ motivation in mathematics in secondary school. To collect research data I have used semi structured interviews with four secondary school teachers. The result constructs according to categories that depict the purpose of the study. These categories define students’ motivation like achieving...

  5. RT-Syn: A real-time software system generator

    Science.gov (United States)

    Setliff, Dorothy E.

    1992-01-01

    This paper presents research into providing highly reusable and maintainable components by using automatic software synthesis techniques. This proposal uses domain knowledge combined with automatic software synthesis techniques to engineer large-scale mission-critical real-time software. The hypothesis centers on a software synthesis architecture that specifically incorporates application-specific (in this case real-time) knowledge. This architecture synthesizes complex system software to meet a behavioral specification and external interaction design constraints. Some examples of these external constraints are communication protocols, precisions, timing, and space limitations. The incorporation of application-specific knowledge facilitates the generation of mathematical software metrics which are used to narrow the design space, thereby making software synthesis tractable. Success has the potential to dramatically reduce mission-critical system life-cycle costs not only by reducing development time, but more importantly facilitating maintenance, modifications, and extensions of complex mission-critical software systems, which are currently dominating life cycle costs.

  6. Cochlospermum religiosum (L.) Alston Syn. C. gossypium DC ...

    Indian Academy of Sciences (India)

    fibrous, deeply furrowed bark containing gum and lobed leaves. Flowers (in the foreground) which appear after leaffall are large, golden yellow in terminal branched inflorescences. Fruit is large, and pear-shaped. Seeds are numerous and are covered with woolly hairs. Dried leaves and flowers are used as stimulant.

  7. Cordia dichotomoa Forst. f Syn. C. obliqua Willd. (English: Sebesten ...

    Indian Academy of Sciences (India)

    ropes, cordage and paper pulp. The fruit is an astringent and is used in affections o.f urinary passages, diseases o.llllngs and spleen. The decoction of bark is used infevers. The kernels are used in treating ring-worm. The leaves are used in treating ulcers and headache. The plant is used as an antidote to snake-bite.

  8. Nutrient cycling by Acacia erioloba (syn. Acacia giraffae ) in ...

    African Journals Online (AJOL)

    arid areas of Southern Africa because of the many benefits it offers to local communities. However, little quantitative plant and soil data exist to explain its ability to enhance soil fertility under local conditions. Paired soil samples taken under and ...

  9. Mediterranean-style diet effect on the structural properties of the erythrocyte cell membrane of hypertensive patients: the Prevencion con Dieta Mediterranea Study.

    Science.gov (United States)

    Barceló, Francisca; Perona, Javier S; Prades, Jesús; Funari, Sérgio S; Gomez-Gracia, Enrique; Conde, Manuel; Estruch, Ramon; Ruiz-Gutiérrez, Valentina

    2009-11-01

    A currently ongoing randomized trial has revealed that the Mediterranean diet, rich in virgin olive oil or nuts, reduces systolic blood pressure in high-risk cardiovascular patients. Here, we present a structural substudy to assess the effect of a Mediterranean-style diet supplemented with nuts or virgin olive oil on erythrocyte membrane properties in 36 hypertensive participants after 1 year of intervention. Erythrocyte membrane lipid composition, structural properties of reconstituted erythrocyte membranes, and serum concentrations of inflammatory markers are reported. After the intervention, the membrane cholesterol content decreased, whereas that of phospholipids increased in all of the dietary groups; the diminishing cholesterol:phospholipid ratio could be associated with an increase in the membrane fluidity. Moreover, reconstituted membranes from the nuts and virgin olive oil groups showed a higher propensity to form a nonlamellar inverted hexagonal phase structure that was related to an increase in phosphatidylethanolamine lipid class. These data suggest that the Mediterranean-style diet affects the lipid metabolism that is altered in hypertensive patients, influencing the structural membrane properties. The erythrocyte membrane modulation described provides insight in the structural bases underlying the beneficial effect of a Mediterranean-style diet in hypertensive subjects.

  10. The miR-124 family of microRNAs is crucial for regeneration of the brain and visual system in the planarian Schmidtea mediterranea.

    Science.gov (United States)

    Sasidharan, Vidyanand; Marepally, Srujan; Elliott, Sarah A; Baid, Srishti; Lakshmanan, Vairavan; Nayyar, Nishtha; Bansal, Dhiru; Sánchez Alvarado, Alejandro; Vemula, Praveen Kumar; Palakodeti, Dasaradhi

    2017-09-15

    Brain regeneration in planarians is mediated by precise spatiotemporal control of gene expression and is crucial for multiple aspects of neurogenesis. However, the mechanisms underpinning the gene regulation essential for brain regeneration are largely unknown. Here, we investigated the role of the miR-124 family of microRNAs in planarian brain regeneration. The miR-124 family ( miR-124 ) is highly conserved in animals and regulates neurogenesis by facilitating neural differentiation, yet its role in neural wiring and brain organization is not known. We developed a novel method for delivering anti-miRs using liposomes for the functional knockdown of microRNAs. Smed-miR-124 knockdown revealed a key role for these microRNAs in neuronal organization during planarian brain regeneration. Our results also demonstrated an essential role for miR-124 in the generation of eye progenitors. Additionally, miR-124 regulates Smed-slit-1 , which encodes an axon guidance protein, either by targeting slit-1 mRNA or, potentially, by modulating the canonical Notch pathway. Together, our results reveal a role for miR-124 in regulating the regeneration of a functional brain and visual system. © 2017. Published by The Company of Biologists Ltd.

  11. Det offentliges snævre syn på konkurrence

    DEFF Research Database (Denmark)

    Ritter, Thomas

    2014-01-01

    Det er et mantra, men et stærkt funderet mantra, at velfungerende konkurrence på markeder er et godt fundament for virksomhedernes udvikling af deres konkurrenceevne - og dermed er konkurrence godt for velfærd og vækst....

  12. Syn for sagn. Dansk arkæologi og historie i 1800-tallet

    DEFF Research Database (Denmark)

    Gjerløff, Anne Katrine

    1999-01-01

    En undersøgelse af forholdet mellem historie og den forhistoriske arkæologi i Danmark i 1800-tallet. Der lægges vægt på arkæologiens professionalisering  og begyndende afvisning af de skriftlige kilders relevans for forhistorien og på kildeopfattelsens betydning for de to fags adskillelse og iden...

  13. Lawsonia inermis L. Syn. L. alba LamK. (Mehndi or Henna Hindi) of ...

    Indian Academy of Sciences (India)

    ... or rose-coloured, fragrant and borne on pyramidal bunches. Fruits bear numerous seeds. Hair dye is prepared from the leaves. The powdered leaf is the cosmetic henna which is used to stain the finger nails. Decoction of leaves is used as a gargle for sore throat. The bark is given for jaundice and enlargement of spleen.

  14. Förskolans estetik : Pedagogers syn på estetik i förskolan

    OpenAIRE

    Mellqvist, Andrea

    2009-01-01

    This examination paper defines how educators work with esthetic, and esthetic learning in pre-school. I have done research by interviewing four pedagogues. The result shows that the pedagogues does work with esthetic and practice esthetic learning processes, but their work shift. Some pedagoues practice strong esthetic and some practice more modest esthetic. Some of the pedagogues are more aware than other of the esthetics influens of the childrens life long learning. The learning about them ...

  15. Cicca disticha L. Syn. C. AcidaMerr. (English: Gooseberry-tree ...

    Indian Academy of Sciences (India)

    -size tree, which is often cultivatedfor itsfruits. Older branches show large scars where foliage branches ... Fruit is a depressed globose berry, lobed with fleshy outer and hard inner portions. The fleshy edible part of the fruit is sour and is pickled.

  16. Syn-Rift Systems of East Godavari Sub Basin: Its Evolution and Hydrocarbon Prospectivity

    Science.gov (United States)

    Dash, J., Jr.; Zaman, B.

    2014-12-01

    Krishna Godavari (K.G.) basin is a passive margin basin developed along the Eastern coast of India. This basin has a polyhistoric evolution with multiple rift systems. Rift basin exploration has provided the oil and gas industry with almost one third of discovered global hydrocarbon resources. Understanding synrift sequences, their evolution, depositional styles and hydrocarbon prospectivity has become important with recent discovery of the wells, G-4-6,YS-AF and KG-8 in the K.G. offshore basin. The East Godavari subbasin is a hydrocarbon producing basin from synrift and pre-rift sediments, and hence this was selected as the study area for this research. The study has been carried out by utilizing data of around 58 wells (w1-w58) drilled in the study area 25 of which are hydrocarbon bearing with organic thickness varying from 200 m to 600 m. Age data generated by palaentology and palynology studies have been utilized for calibration of key well logs to differentiate between formations within prerift and synrift sediments. The electrologs of wells like resistivity, gamma ray, neutron, density and sonic logs have been utilized for correlation of different formations in all the drilled wells. The individual thicknesses of sand, shale and coal in the formations have been calculated and tabulated. For Golapalli formation, the isopach and isolith maps were generated which revealed that there were four depocentres with input from the north direction. Schematic geological cross sections were prepared using the well data and seismic data to understand the facies variation across the basin. The sedimentological and petrophysical analysis reports and electro log suites were referred to decipher the environment of deposition, the reservoir characteristics, and play types. The geochemical reports [w4 (Tmax)= 455-468 °C; w1 (Tmax) = 467-514 °C; w4(VRO)= 0.65-0.85; w1(VRO)= 0.83-1.13] revealed the source facies, its maturation and migration timings i.e. the petroleum systems. It was concluded these fluvial channel systems constitute the main hydrocarbon play for the Mandapeta and Gollapalli formations and these channel systems if found at a structurally advantageous positions should prove to be good hydrocarbon targets.

  17. A fuzzy logic based network intrusion detection system for predicting the TCP SYN flooding attack

    CSIR Research Space (South Africa)

    Mkuzangwe, Nenekazi NP

    2017-04-01

    Full Text Available decision tree which is one of the well-known machine learning techniques. The results indicate that the performance difference, in terms of predicting the proportion of attacks in the data, of the proposed system with respect to the decision tree...

  18. Reproductive potential and nesting effects of Osmia rufa (syn. bicornis female (Hymenoptera: Megachilidae

    Directory of Open Access Journals (Sweden)

    Giejdasz Karol

    2016-06-01

    Full Text Available The red mason bee Osmia rufa is a solitary bee belonging to the family Megachilidae, and is prone to nest in aggregations. Each female builds a nest separately in pre-existing cavities such as holes in wood and walls or empty plant stems. This is done by successively setting the cells in a linear series. In this study, we elucidate the nesting behavior and the reproductive potential of a single O. rufa female. The reproductive potential of nesting females was evaluated after the offspring finished development. We observed that an individual female may colonize up to five nest tubes and build 5-34 cells in them (16 on an average. During the nesting time the number of cells decreased with the sequence of nest tubes colonized by one female, which built a maximum of 11 cells in the first occupied nest and 5 cells in the last (fifth nest. Our observations indicated that 40% of nesting females colonized one nest tube as compared to 7% colonizing five nest tubes. Furthermore, in subsequent nest tubes the number of cells with freshly emerged females gradually decreased which was the reverse with males. Thus, the sex ratio (proportion of male and female offspring may change during the nesting period. The female offspring predominated in the first two nesting tubes, while in the subsequent three tubes male offspring dominated. We also cataloged different causes of reduction in abundance of offspring in O. rufa females such as parasitization or problem associated with moulting.

  19. Control optimo de par para maquinas SynRM aplicadas a vehiculo electrico

    OpenAIRE

    Trancho, Elena; Ibarra, E.; Arias, A.; Kortabarria, I.

    2017-01-01

    Las maquinas de reluctancia sincrona asistidas por imanes estan atrayendo un considerable interes como alternativa a las maquinas sıncronas de imanes permanentes para su uso en sistemas de propulsion de vehıculos electricos. El control optimo de estas maquinas (incluyendo operacion en debilitamiento de campo) puede resultar complejo, ya que estas son, por lo general, muy sensibles al fenomeno de la saturacion magnetica. En este articulo se trata su control, desde los reguladores hasta el prec...

  20. Charles Darwin havde et nuanceret syn på dyreforsøg

    DEFF Research Database (Denmark)

    Alstrup, Aage Kristian Olsen

    2015-01-01

    Jeg har i en tidligere blog været inde på, hvordan Charles Darwins evolutionsteori har haft betydning for vores valg af forsøgsdyr. Men hvordan så Charles Darwin egentlig selv på dyreforsøg og dyrevelfærd? Faktisk var det et emne, der optog ham dybt. Allerede i 1838, over tyve år før...... offentliggørelsen af Arternes Oprindelse, gjorde han sig et notat om, at mennesket i sin arrogance føler sig hævet over andre skabninger, men at det snarere bør opfatte sig som skabt ud fra dyrene. Disse tanker kom dog først for alvor frem, da Charles Darwin i 1871 offentliggjorde bogen Menneskets Afstamning...

  1. SYN Flood Attack Detection in Cloud Computing using Support Vector Machine

    Directory of Open Access Journals (Sweden)

    Zerina Mašetić

    2017-11-01

    Full Text Available Cloud computing is a trending technology, as it reduces the cost of running a business. However, many companies are skeptic moving about towards cloud due to the security concerns. Based on the Cloud Security Alliance report, Denial of Service (DoS attacks are among top 12 attacks in the cloud computing. Therefore, it is important to develop a mechanism for detection and prevention of these attacks. The aim of this paper is to evaluate Support Vector Machine (SVM algorithm in creating the model for classification of DoS attacks and normal network behaviors. The study was performed in several phases: a attack simulation, b data collection, cfeature selection, and d classification. The proposedmodel achieved 100% classification accuracy with true positive rate (TPR of 100%. SVM showed outstanding performance in DoS attack detection and proves that it serves as a valuable asset in the network security area.

  2. Rootless calc-silicate folds in granite: An implication towards syn to ...

    Indian Academy of Sciences (India)

    36

    southernmost extension of the Southern Aravalli Mountain Belt (SAMB) in Gujarat and is. 24 located at the junction between the two older sequences, viz. the Lunavada Group in the north. 25. 1. 2. 3. 4. 5. 6. 7. 8. 9. 10. 11. 12. 13. 14. 15. 16. 17. 18. 19. 20. 21. 22. 23. 24. 25. 26. 27. 28. 29. 30. 31. 32. 33. 34. 35. 36. 37. 38. 39.

  3. Hydrogen separation from high temperature CO-containing syn-gas flow using molecular ceramic membranes

    Energy Technology Data Exchange (ETDEWEB)

    Soudarev, A.; Konakov, G.; Souryaninov, A.; Molchanov, A. [Boyko Research Engineering Ceramic Heat Engines Center Ltd., St. Petersburg (Russian Federation); Lelait, L.; Stevens, P.H. [European Inst. for Power Studies, Karlsruhe (Germany)

    2006-07-01

    Poisoning of the platinum (Pt) metals used as catalysts for proton exchange membrane fuel cells (PEMFCs) can negatively impact on PEMFC operation efficiency. In order to address this issue, a supply of hydrogen with a carbon monoxide (CO) admixtures is required. This paper provided details of a new type of molecular ceramic membrane (MCM) that allows the separation of hydrogen (H{sub 2}) from the hydrocarbon fuel reforming products that contain CO and has higher temperature and pressure capacity than other membranes. After various tests, alumo-magnesium spinel (AMS) was selected as the most promising porous material for the ceramic multi-layer membrane. The crystalline structure of the AMS showed good thermo-dynamic stability during tests that ranged between 20 and 1400 degrees C, as well as a chemical resistance relative to the effects of the aggressive fuel cell environment, and no exposure to the oxidation-recovery processes in the CO and H{sub 2} flow. The macroporous substrate of the AMS and the membrane selection layers have the same composition. The formation of the carrier was conducted by a semi-dry molding on a hydraulic press. Formation of the nano-porous structure in the carrier macro-pores by the polysilicon acid sol solution treatment allowed the synthesis of the amorphous silica and crystobalite crystals with a developed surface and nano-dimension subporosity. Test results have shown that the MCM has optimum penetrability and selectivity values as well as admissible thermo-mechanical properties. H{sub 2} flow through the membrane was 1.5-1.7 times greater than the CO flow. It was concluded that the AMS-based membrane devices will increase the efficiency of the PEMFC power plants and reduce their degradation capacity. 2 refs., 1 tab., 1 fig.

  4. SYN-JEM : A Quantitative Job-Exposure Matrix for Five Lung Carcinogens

    NARCIS (Netherlands)

    Peters, Susan; Vermeulen, Roel; Portengen, L??tzen; Olsson, Ann; Kendzia, Benjamin; Vincent, Raymond; Savary, Barbara; LavouCrossed Sign, Jcrossed D Signr??me; Cavallo, Domenico; Cattaneo, Andrea; Mirabelli, Dario; Plato, Nils; Fevotte, Joelle; Pesch, Beate; Br??ning, Thomas; Straif, Kurt; Kromhout, Hans

    2016-01-01

    OBJECTIVE The use of measurement data in occupational exposure assessment allows more quantitative analyses of possible exposure-response relations. We describe a quantitative exposure assessment approach for five lung carcinogens (i.e. asbestos, chromium-VI, nickel, polycyclic aromatic hydrocarbons

  5. SYN-JEM : A Quantitative Job-Exposure Matrix for Five Lung Carcinogens

    NARCIS (Netherlands)

    Peters, Susan; Vermeulen, Roel; Portengen, Lützen; Olsson, Ann C.; Kendzia, Benjamin; Vincent, Raymond; Savary, Barbara; LavouCrossed Sign, Jcrossed D.Signrôme; Cavallo, Domenico; Cattaneo, Andrea; Mirabelli, Dario; Plato, Nils; Fevotte, Joelle; Pesch, Beate; Brüning, Thomas; Straif, Kurt; Kromhout, Hans

    2016-01-01

    Objective: The use of measurement data in occupational exposure assessment allows more quantitative analyses of possible exposure-response relations. We describe a quantitative exposure assessment approach for five lung carcinogens (i.e. asbestos, chromium-VI, nickel, polycyclic aromatic

  6. The American species of the genus Glaucolepis Braun, 1917 (Neotrifurcula van Nieukerken, syn. nov.) (Lepidoptera: Nepticulidae)

    Science.gov (United States)

    We provide diagnostic characters for the genus Glaucolepis Braun, re-examine the type series of the type species of the North American G. saccharella Braun, describe two new species from Chile and Argentina (G. flagellata Remeikis & Stonis, sp. nov. and G. pseudoflagellata Remeikis & Stonis, sp. nov...

  7. Syn-rift unconformities punctuating the lower-middle Cambrian transition in the Atlas Rift, Morocco

    OpenAIRE

    Álvaro, J. Javier; Ezzouhairi, Hassan; Clausen, Sébastien; Ribeiro, Maria Luísa; Solá, Ana Rita

    2015-01-01

    The Cambrian Tamdroust and Bab n’Ali Volcanic Complexes represent two magmatic episodes developed in the latest Ediacaran–Cambrian Atlas Rift of Morocco. Their rifting pulses were accompanied by accumulation of volcanosedimentary edifices (dominated by effusive lava flows in the former and explosive acidic aprons in the latter) associated with active tilting and uplift. Sealing of their peneplaned horst-and-graben palaeotopographies led to the onset of distinct onlapping geometrie...

  8. Syn-rift unconformities punctuating the lower-middle Cambrian transition in the Atlas Rift, Morocco

    Science.gov (United States)

    Álvaro, J. Javier; Ezzouhairi, Hassan; Clausen, Sébastien; Ribeiro, M. Luisa; Solá, Rita

    2015-04-01

    The Cambrian Tamdroust and Bab n'Ali Volcanic Complexes represent two magmatic episodes developed in the latest Ediacaran-Cambrian Atlas Rift of Morocco. Their rifting pulses were accompanied by accumulation of volcanosedimentary edifices (dominated by effusive lava flows in the former and explosive acidic aprons in the latter) associated with active tilting and uplift. Sealing of their peneplaned horst-and-graben palaeotopographies led to the onset of distinct onlapping geometries and angular discordances capping eroded basements ranging from the Ediacaran Ouarzazate Supergroup to the Cambrian Asrir Formation. Previous interpretations of these discordances as pull-apart or compressive events are revised here and reinterpreted in an extensional (rifting) context associated with active volcanism. The record of erosive unconformities, stratigraphic gaps, condensed beds and onlapping patterns across the traditional "lower-middle Cambrian" (or Cambrian Series 2-3) transition of the Atlas Rift must be taken into consideration for global chronostratigraphic correlation based on their trilobite content.

  9. Role of syn-eruptive plagioclase disequilibrium crystallization in basaltic magma ascent dynamics.

    Science.gov (United States)

    La Spina, G; Burton, M; De' Michieli Vitturi, M; Arzilli, F

    2016-12-12

    Timescales of magma ascent in conduit models are typically assumed to be much longer than crystallization and gas exsolution for basaltic eruptions. However, it is now recognized that basaltic magmas may rise fast enough for disequilibrium processes to play a key role on the ascent dynamics. The quantification of the characteristic times for crystallization and exsolution processes are fundamental to our understanding of such disequilibria and ascent dynamics. Here we use observations from Mount Etna's 2001 eruption and a magma ascent model to constrain timescales for crystallization and exsolution processes. Our results show that plagioclase reaches equilibrium in 1-2 h, whereas ascent times were magma ascent rate and disequilibrium crystallization and exsolution plays a key role in controlling eruption dynamics in basaltic volcanism.

  10. Morphology and physiology of the dimorphic fungus Mucor circinelloides (syn. M. racemosus) during anaerobic growth

    DEFF Research Database (Denmark)

    Lübbehüsen, Tina Louise; Nielsen, Jens; Mcintyre, Mhairi

    2003-01-01

    The dimorphic Mucor circinelloides requires an anaerobic atmosphere and the presence of 30% CO2 to grow as a multipolar budding yeast, otherwise hyphal growth predominates. Establishing other means to control the morphology would be a distinct advantage in the development of a fermentation process...

  11. Growth physiology and dimorphism of Mucor circinelloides (syn. racemosus) during submerged batch cultivation

    DEFF Research Database (Denmark)

    Mcintyre, Mhairi; Breum, J.; Arnau, J.

    2002-01-01

    Mucor circinelloides is being investigated as a possible host for the production of heterologous proteins. Thus, the environmental conditions defining the physiology and morphology of this dimorphic fungus have been investigated in submerged batch cultivation. The optimal conditions for growth...

  12. Fremlæggelse af vores syn på menings- og undringsdreven innovation

    DEFF Research Database (Denmark)

    Hansen, Finn Thorbjørn; Herholdt-Lomholdt, Sine Maria

    2017-01-01

    I denne artikel ’slås tonen an’ ved at stille ind på den forundring, der oftest går forud for den mere filosofiske undren, og som knytter sig til en æstetisk transcendens-erfaring. Med idéhistorikeren Dorthe Jørgensen (Jørgensen, 2014) nuancerer vi, hvad det kan være for anelsesfulde og indfaldsp...... entreprenørtilgang til ’design-drevne innovation’, som f.eks. den danske innovationsorganisation MindLab trækker på, her eksemplificeret af Liedtka og Ogilvies (Liedtka & Ogilvie, 2011) model for designdreven innovation....

  13. Forfriskende syn på bæredygtighed (Refreshing view on sustainability)

    DEFF Research Database (Denmark)

    Nørgaard, Jørgen

    2009-01-01

    The article is a review of a Danish book, 'Sustainability- Nature shows the Way', on 269 pages presenting a view on sustainability different from usual. A system's sustainablity is based on thermodynamics' available work, for living systems multiplied with a genetic information factor. This ascri...... reversing deforestation....

  14. Computerized tomography of adrenal glands in the investigation of Cushing's syn

    International Nuclear Information System (INIS)

    Abucham Filho, J.; Albertotti, C.; Kater, C.E.; Vieira, J.G.H.; Chacra, A.R.

    1983-01-01

    Computerized tomography of the adrenal glands was performed in 10 patients with Cushing's syndrome using a G.E. 8800 CT/T Body Scanner. The tomographic findings of unilateral adrenal masses in 4 patients were confirmed by surgery. In the remaining 6 patients, computerized tomography did not identify any masses, and both glands were well visualized and showed normal shape. In these patients, measurement of the adrenal glands revealed both normal (n=1) and enlarged glands (n=5). The findings of adrenalectomy (n=4) or transphenoidal surgery and follow-up (n=2) established the diagnosis of adrenal phyperplasia in all patients. (Author) [pt

  15. Rattus norvegicus (Rodentia: Muridae Infected by Leishmania (Leishmania infantum (syn. Le. chagasi in Brazil

    Directory of Open Access Journals (Sweden)

    Fabiana de Oliveira Lara-Silva

    2014-01-01

    Full Text Available In the present study we surveyed the fauna of phlebotomine sand flies and small mammals in peridomestic areas from a Brazilian municipality where the American cutaneous leishmaniasis (ACL is endemic. A total of 608 female phlebotomine sand flies were captured during nine months in 2009 and 2010. Seven different species were represented with 60% of them being Lutzomyia intermedia and Lu. whitmani, both incriminated vectors of ACL. Lu. longipalpis, a proven vector of visceral leishmaniasis (VL was also captured at high proportion (12.8%. Genomic DNA analysis of 136 species-specific pools of female sand flies followed by molecular genotyping showed the presence of Leishmania infantum DNA in two pools of Lu. longipalpis. The same Leishmania species was found in one blood sample from Rattus norvegicus among 119 blood and tissue samples analysed. This is the first report of Le. infantum in R. norvegicus in the Americas and suggests a possible role for this rodent species in the zoonotic cycle of VL. Our study coincided with the reemergence of VL in Governador Valadares.

  16. Danske og svenske forbrugeres syn på e-handel med dagligvarer

    DEFF Research Database (Denmark)

    Kornum, Niels

    2003-01-01

    , at det er vigtigt at få forbrugerne til at prøve ordningerne f.eks. viatilbud og/eller forskellige medlemsfordele for at motivere dem til at indgå i ordningen. Detviser to nye undersøgelser gennemført af forskere fra Institut for Afsætningsøkonomi,Handelshøjskolen i København i samarbejde med forskere......,dels at de bliver mindre afhængige af butikkernes åbningstider. De vigtigste ulemper set fraforbrugerside er dels at online handel er mindre spændende end køb i supermarkedet, delsat der er begrænset adgang til at se og føle på varerne før køb i online butikken. Det er dogforbrugere, der ikke har handlet på...... deresdagligvareindkøb online. En medvirkende årsag kan dog desuden være, at mangeforbrugere ikke har tilstrækkeligt med informationer til at kunne skønne omfanget af deomkostninger, som må bæres af online leverandøren i forbindelse med pakning,distribution mv. af dagligvarerne.Undersøgelsen viser, at et klart og...

  17. Reproductive potential and nesting effects of Osmia rufa (Syn. Bicornis) female (Hymenoptera: Megachilidae)

    Czech Academy of Sciences Publication Activity Database

    Giejdasz, K.; Fliszkiewicz, M.; Bednářová, Andrea; Krishnan, N.

    2016-01-01

    Roč. 60, č. 1 (2016), s. 75-85 ISSN 1643-4439 Institutional support: RVO:60077344 Keywords : megachilidae * reproduction * nest Subject RIV: ED - Physiology Impact factor: 0.722, year: 2016 https://www.degruyter.com/view/j/jas.2016.60.issue-1/jas-2016-0003/jas-2016-0003.xml

  18. Genes and Structural Proteins of the Phage Syn5 of the Marine Cyanobacteria Synechococcus

    Science.gov (United States)

    2005-09-01

    Morgan et al., 2002; van de Putte et al., 1980). Inversion of the segment is controlled by a phage encoded invertase , expressed by the gene gin, which...growth of marine planktonic cyanobacteria. Methods in Enzymology , 167, 100-105. 170 Weigele, P.R., Scanlon, E. and King, J. (2003) Homotrimeric, beta

  19. Fault zone architecture within Miocene–Pliocene syn-rift sediments ...

    Indian Academy of Sciences (India)

    The present study focusses on field description of small normal fault zones in Upper Miocene–Pliocene sedimentary rocks on the northwestern side of the Red Sea, Egypt. The trend of these fault zones is mainly NW–SE. Paleostress analysis of 17 fault planes and slickenlines indicate that the tension direction is NE–SW.

  20. Immobilisation and characterisation of glucose dehydrogenase immobilised on ReSyn: a proprietary polyethylenimine support matrix

    CSIR Research Space (South Africa)

    Twala, BV

    2010-01-01

    Full Text Available Immobilisation of enzymes is of considerable interest due to the advantages over soluble enzymes, including improved stability and recovery. Glucose Dehydrogenase (GDH) is an important biocatalytic enzyme due to is ability to recycle the biological...

  1. Chlorine Isotope Evidence for Syn-Subduction Modification of Serpentinites by Interaction with Sediment-Derived Fluid

    Science.gov (United States)

    Selverstone, J.; Sharp, Z. D.

    2012-12-01

    High-pressure serpentinites and rodingites and high- to ultrahigh-pressure metasedimentary rocks from the Aosta region, Italy, preserve strikingly different chlorine isotope compositions that can be used to constrain the nature of fluid-rock interactions during subduction. Serpentinites and rodingitized gabbroic dikes subducted to 70-80 km have bulk δ37Cl values between -1.6 and +0.9‰ (median= -0.5‰, n=26 plus 5 replicates; one amphibole-vein outlier at -2.9‰). Serpentinite δ37Cl values are positively correlated with Cr ± Cl contents (r2= 0.97 and 0.58) and negatively correlated with CaO (r2=0.72). BSE imaging and X-ray mapping reveal up to three generations of compositionally distinct serpentine and chlorite in single samples. The youngest generation, which is most abundant, has the lowest chlorine content. Three rodingite samples contain abundant texturally early fluid inclusions. These samples were finely crushed and leached in 18 MΩ H2O to extract water-soluble chlorides. The leachates, which are assumed to record the compositions of the fluid inclusions, have δ37Cl values that are 0.7-1.5‰ lower than the corresponding bulk rock values. Leachate from the outlier amph-magnesite vein is indistinguishable from the bulk value at -2.7‰. There is almost no overlap between the Cl isotope compositions of HP serp/rod samples and associated HP/UHP metasedimentary rocks. Calcmica schists, diamond-bearing Mn nodules, and impure marbles subducted to >130 km and calcmica schists and Mn crusts transported to 70-80 km have δ37Cl values between -4.5 and -1.5‰ (median= -2.7‰, n=25 plus 7 replicates; two outlier points at -0.5‰). Primary fluid inclusions in the diamondiferous samples contain carbonate- and silicate-bearing aqueous fluids with very low chloride contents (Frezzotti et al., 2011, Nature Geosci). Taken together, these data record a history of progressive modification of serpentinites and rodingites by mixing with low-δ37Cl, low-Cl, high-Ca fluids during subduction and metamorphism. Serpentinites with the highest Cr contents have Cl isotopic compositions identical to those of modern seafloor serpentinites (δ37Cl=0.2-0.6‰), consistent with primary serpentinization by seawater (e.g., Barnes et al. 2009, Lithos). Low-Cr serpentinites record significant interaction with a Ca-rich fluid that shifted the rocks to lower δ37Cl values and diluted the original Cr and Cl contents. The fluid was likely derived from continuous devolatilization reactions in associated low-δ37Cl, calcareous metasedimentary rocks. These data have important implications for models of subduction mass transfer associated with antigorite breakdown. If serpentinites are commonly modified by interaction with metasedimentary fluids prior to antigorite dehydration, chemical signatures imparted during deserpentinization will reflect the integrated history of fluid-rock interaction in the subduction channel rather than an endmember "serpentinite signature". The data further suggest that Cl may be hydrophobic in HP/UHP carbonate-bearing aqueous fluids, resulting in generation of low-Cl fluid during metamorphic devolatilization.

  2. Syn-extensional plutonism and peak metamorphism in the albion-raft river-grouse creek metamorphic core complex

    Science.gov (United States)

    Strickland, A.; Miller, E.L.; Wooden, J.L.; Kozdon, R.; Valley, J.W.

    2011-01-01

    The Cassia plutonic complex (CPC) is a group of variably deformed, Oligocene granitic plutons exposed in the lower plate of the Albion-Raft River- Grouse Creek (ARG) metamorphic core complex of Idaho and Utah. The plutons range from granodiorite to garnet-bearing, leucogranite, and during intrusion, sillimanite- grade peak metamorphism and ductile attenuation occurred in the country rocks and normal-sense, amphibolite-grade deformation took place along the Middle Mountain shear zone. U-Pb zircon geochronology from three variably deformed plutons exposed in the lower plate of the ARG metamorphic core complex revealed that each zircon is comprised of inherited cores (dominantly late Archean) and Oligocene igneous overgrowths. Within each pluton, a spread of concordant ages from the Oligocene zircon overgrowths is interpreted as zircon recycling within a long-lived magmatic system. The plutons of the CPC have very low negative whole rock ??Nd values of -26 to -35, and initial Sr values of 0.714 to 0.718, consistent with an ancient, crustal source. Oxygen isotope ratios of the Oligocene zircon overgrowths from the CPC have an average ??18O value of 5.40 ?? 0.63 permil (2SD, n = 65) with a slight trend towards higher ??18O values through time. The ??18O values of the inherited cores of the zircons are more variable at 5.93 ?? 1.51 permil (2SD, n = 29). Therefore, we interpret the plutons of the CPC as derived, at least in part, from melting Archean crust based on the isotope geochemistry. In situ partial melting of the exposed Archean basement that was intruded by the Oligocene plutons of the CPC is excluded as the source for the CPC based on field relationships, age and geochemistry. Correlations between Ti and Hf concentrations in zircons from the CPC suggest that the magmatic system may have become hotter (higher Ti concentration in zircon) and less evolved (lower Hf in zircon concentration) through time. Therefore, the CPC represents prolonged or episodic magmatism system (32-25 Ma), and the intrusions were each accompanied by sillimanite-grade deformation and extension. The Oligocene magmatism and peak metamorphism preserved in the ARG metamorphic core complex are likely related to regional trends in mantle-derived magmatism that led to protracted heating, melting and mobilization of the deeper crust.

  3. Den 11. olympiade - Berlin 1936. De danske avisers syn på sport og politik i 1930erne

    OpenAIRE

    Jensen, Rasmus Camillo

    2016-01-01

    This masters-thesis will examine how the six big Danish newspapers Arbejderbladet, Berlingske Tidende, Fyns Tidende, Jyllands-Posten, Politiken and Social-Demokraten wrote about the 1936 Olympics. The 1936 Olympics was held in Berlin, Germany, in a time where the Nazis, with Adolf Hitler as its leader, had the power. The purpose of this masters-thesis is to examine whether the six chosen newspapers referred to Nazis legislation in their coverage of the Olympics, because this legislation had i...

  4. Tectono-metamorphic evolution of the Jomolhari massif: Variations in timing of syn-collisional metamorphism across western Bhutan

    Science.gov (United States)

    Regis, Daniele; Warren, Clare J.; Young, David; Roberts, Nick M. W.

    2014-03-01

    Our current understanding of the rates and timescales of mountain-building processes is largely based on information recorded in U-bearing accessory minerals such as monazite, which is found in low abundance but which hosts the majority of the trace element budget. Monazite petrochronology was used to investigate the timing of crustal melting in migmatitic metasedimentary rocks from the Jomolhari massif (NW Bhutan). The samples were metamorphosed at upper amphibolite to granulite facies conditions (~ 0.85 GPa, ~ 800 °C), after an earlier High-Pressure stage (P > 1.4 GPa), and underwent partial melting through dehydration melting reactions involving muscovite and biotite. In order to link the timing of monazite growth/dissolution to the pressure-temperature (P-T) evolution of the samples, we identified 'chemical fingerprints' in major and accessory phases that were used to back-trace specific metamorphic reactions. Variations in Eu anomaly and Ti in garnet were linked to the growth and dissolution of major phases (e.g. growth of K-feldspar and dehydration melting of muscovite/biotite). Differences in M/HREE and Y from garnet core to rim were instead related to apatite breakdown and monazite-forming reactions. Chemically zoned monazite crystals reacted multiple times during the metamorphic evolution suggesting that the Jomolhari massif experienced a prolonged high-temperature metamorphic evolution from 36 Ma to 18 Ma, significantly different from the P-T-time path recorded in other portions of the Greater Himalayan Sequence (GHS) in Bhutan. Our data demonstrate unequivocally that the GHS in Bhutan consists of units that experienced independent high-grade histories and that were juxtaposed across different tectonic structures during exhumation. The GHS may have been exhumed in response to (pulsed) mid-crustal flow but cannot be considered a coherent block.

  5. Diastereodivergent Access to> Syn and Anti 3,4-Substituted β-Fluoropyrrolidines: Enhancing or Reversing Substrate Preference

    DEFF Research Database (Denmark)

    Fjelbye, Kasper; Marigo, Mauro; Clausen, Rasmus Prætorius

    2016-01-01

    A practical diastereodivergent access to β-fluoropyrrolidines with two adjacent stereocenters has been demonstrated, by either enhancing or completely reversing the substrate control, in the diastereoselective fluorination of a series of diverse pyrrolidinyl carbaldehydes using organocatalysis. F...

  6. Taming Radical Pairs in Nanocrystalline Ketones: Photochemical Syn-thesis of Compounds with Vicinal Stereogenic All-Carbon Quaternary Centers.

    Science.gov (United States)

    Dotson, Jordan J; Perez-Estrada, Salvador; Garcia-Garibay, Miguel A

    2018-05-29

    Here we describe the use of crystalline ketones to control the fate of the radical pair intermediates generated in the Norrish type I photodecarbonylation reaction to render it a powerful tool in the challenging synthesis of sterically congested carbon-carbon bonds. This methodology makes the synthetically more accessible hexasusbtituted ketones as ideal synthons for the construction of adjacent, all-carbon substituted, stereogenic quaternary stereocenters. We describe here the structural and thermochemical parameters required of the starting ketone in order to react in the solid state. Finally, the scope and scalability of the reaction and its application in the total synthesis of two natural products is described.

  7. The Jurassic of Denmark and Greenland: Shallow marine syn-rift sedimentation: Middle Jurassic Pelion Formation, Jameson Land, East Greenland

    Directory of Open Access Journals (Sweden)

    Engkilde, Michael

    2003-10-01

    Full Text Available The Middle Jurassic Pelion Formation – Fossilbjerget Formation couplet of Jameson Land, East Greenland, is a well-exposed example of the Middle Jurassic inshore–offshore successions characteristicof the rifted seaways in the Northwest European – North Atlantic region. Early Jurassic deposition took place under relatively quiet tectonic conditions following Late Permian – earliest Triassic and Early Triassic rift phases and the Lower Jurassic stratal package shows an overall layer-cake geometry. A long-term extensional phase was initiated in Middle Jurassic (Late Bajocian time, culminated in the Late Jurassic (Kimmeridgian–Volgian, and petered out in the earliest Cretaceous (Valanginian. The Upper Bajocian – Middle Callovian early-rift succession comprises shallow marine sandstones of the Pelion Formation and correlative offshore siltstones of theFossilbjerget Formation. Deposition was initiated by southwards progradation of shallow marine sands of the Pelion Formation in the Late Bajocian followed by major backstepping in Bathonian–Callovian times and drowning of the sandy depositional system in the Middle–Late Callovian. Six facies associations are recognised in the Pelion–Fossilbjerget couplet, representing estuarine, shoreface, offshore transition zone and offshore environments. The north–southtrendingaxis of the Jameson Land Basin had a low inclination, and deposition was sensitive to even small changes in relative sea level which caused the shorelines to advance or retreat over tens to several hundreds of kilometres. Eight composite sequences, termed P1–P8, are recognised and are subdivided into a total of 28 depositional sequences. The duration of the two orders of sequences was about 1–2 Ma and 360,000 years, respectively. The Upper Bajocian P1–2 sequencesinclude the most basinally positioned shallow marine sandstones, deposited during major sealevel lowstands. The lowstands were terminated by significant marine flooding events, during which sandstone deposition was restricted to northern, more proximal parts of the basin. The Upper Bajocian – Middle Bathonian P3–4 sequences show an overall progradational stacking pattern. The sequence boundary at the top of P4 marks a significant shift in stacking pattern, and the Upper Bathonian – Middle Callovian P5–8 sequences show large-scale backstepping, terminating in a widespread condensed succession at the distal, southern end of the basin. The largescalebackstepping was governed by combined tectonically-induced subsidence, reflecting increased rates of extension, and eustatic sea-level rise. The depositional trends of the Pelion Formation – Fossilbjerget Formation couplet provide a well-exposed analogue to contemporaneous subsurface deposits which form major hydrocarbon reservoirs on the west Norway shelf, and in the Northern North Sea.

  8. First report of latent infection of Cyperus rotundus caused by a biovar 3 Dickeya sp. (Syn. Erwinia chrysanthemi) in Israel

    NARCIS (Netherlands)

    Tsror, L.; Lebiush, S.; Erlich, O.; Ben-Daniel, B.; Wolf, van der J.M.

    2010-01-01

    Recent outbreaks of potato blackleg in Israel, caused by Dickeya spp., on plants grown from seed tubers imported from Northern Europe, are of a great concern. The warm climatic conditions during the growing season favour disease expression, and may result in the establishment of the pathogen in the

  9. Rifting and Subsidence in the Gulf of Mexico: Implications for Syn-rift, Sag, and Salt Sections, and Subsequent Paleogeography

    Science.gov (United States)

    Pindell, J. L.; Graham, R.; Horn, B.

    2013-05-01

    Thick (up to 5 km), rapid (depression where basement had already subsided tectonically, and thus could receive up to 5 km of salt, roughly the isostatic maximum on exhumed mantle, hyper-thinned continent, or new ocean crust. ION-GXT and other seismic data along W Florida and NW Yucatán show that (1) mother salt was only 1 km thick in these areas, (2) that these areas were depositionally connected to areas of thicker deposition, and (3) the top of all salt was at global sea level, and hence the sub-salt unconformity along Florida and Yucatán was only 1 km deep by end of salt deposition. These observations fit the air-filled chasm hypothesis; however, two further observations make that mechanism highly improbable: (1) basinward limits of sub-salt unconformities along Florida/Yucatán are deeper than top of adjacent ocean crust emplaced at ~2.7 km subsea (shown by backstripping), and (2) deepest abyssal sediments over ocean crust onlap the top of distal salt, demonstrating that the salt itself was rapidly drowned after deposition. Study of global ION datasets demonstrates the process of "rapid outer marginal collapse" at most margins, which we believe is achieved by low-angle detachment on deep, landward-dipping, Moho-equivalent surfaces such that outer rifted margins are hanging walls of crustal scale half-grabens over mantle. The tectonic accommodation space produced (up to 3 km, < 3 Ma) can be filled by ~5 km of sag/salt sequences with little apparent hanging wall rifting. When salt (or other) deposition lags behind, or ends during, outer marginal collapse, deep-water settings result. We suggest that this newly identified, "outer marginal detachment phase", normally separates the traditional "rift" from "drift" stages during continental margin creation. Importantly, this 2-3 km of subsidence presently is neither treated as tectonic nor as thermal in traditional subsidence analysis; thus, Beta estimates may be excessive at many outer margins. Outer marginal collapse was probably eastwardly diachronous with initiation of spreading in the GoM. Additionally, recent paleo-climate studies suggest humid Early/Middle Jurassic conditions in equatorial GoM, hindering air-filled chasm development, but North America's northward flight into middle latitudes initiated Callovian aridity.

  10. Effects of Syn-pandemic Fire Reduction and Reforestation in the Tropical Americas on Atmospheric Carbon Dioxide During European Conquest

    Science.gov (United States)

    Nevle, R. J.; Bird, D. K.

    2008-12-01

    A new reconstruction of the Late Holocene biomass burning history of the tropical Americas is consistent with expanding fire use by Mesoamerican and Amazonian agriculturalists from 2000-500 BP and a subsequent period of fire reduction due to indigenous demographic collapse. Our reconstruction synthesizes published data from 50 charcoal accumulation records obtained from stratified lacustrine sediments and from soils, including soil charcoal records recovered from archeological sites. Synthesis of stratigraphic charcoal records yields indexes of the mean rate of regional charcoal accumulation and of variability in charcoal accumulation among sites during 500-year increments since 3500 BP. The age distribution of dated soil charcoal particles from non-archeological sites provides an independent measure of variation in regional charcoal accumulation; whereas age distribution of soil charcoal dates from archeological sites records variation in charcoal accumulation related to anthropogenic biomass burning. We observe that the charcoal accumulation indexes derived from stratigraphic records begin to increase at 2000 BP, remain high until 500 BP, and then decline to near-minimum values during the 500-year period subsequent to European contact. Similarly, the age distributions of soil charcoal dated from both non-archeological and archeological sites indicate increases in charcoal accumulation from 2000 to 500 BP followed by decline. An index of the inter- site variability in charcoal accumulation obtained from the stratigraphic records attains a maximum during the time period between 1000 and 500 BP and a near-minimum value afterward. We interpret the covariation between measures of charcoal accumulation derived from archeological and non-archeological sites as a consequence of the expansive influence of anthropogenic activity on the regional fire regime. Increases in regional charcoal accumulation apparent in both the stratigraphic and soil charcoal records beginning at 2000 BP correlate with expanding indigenous population, agriculture, and fire use in the tropical Americas. The rise in inter-site variability in charcoal accumulation after 2000 BP is consistent with a demographic shift toward sedentary agrarian communities and localized increases in charcoal accumulation in densely populated centers. Declines in regional charcoal accumulation and inter-site variability after 500 BP suggest a correlative cause related to reduction in anthropogenic biomass burning resulting from pandemic-driven population collapse. Published reconstructions of Pre-Columbian demography indicate that during European conquest, pandemics killed ~90% of the indigenous American population (~60 million), estimated to represent ~20% of the 16th century global population. Our predictive calculations suggest that fire reduction in the tropical Americas is associated with massive forest regeneration on ~5 x 105 km2 of land and sequestration of 5-10 Gt C into the terrestrial biosphere, which can account for 13- 50% of the ~2% global reduction in atmospheric CO2 levels and the 0.1‰ increase in δ13C of atmospheric CO2 from 1500 to 1700 CE recorded in Antarctic ice cores and tropical sponges. New archeological discoveries revealing extensive networks of geoglyphs and urban polities in Pre-Columbian Amazonia suggest that our estimates of reforestation, and consequent effects on atmospheric CO2, may be conservative.

  11. Antibacterial activity of saponin and alkaloidal extracts of whole plant of phyllanthus niruri L., (Syn. P. franternus webster)

    International Nuclear Information System (INIS)

    Ajibade, V.A.; Famurewa, O.

    2011-01-01

    Saponins identified as phylagenin-13-O-alpha-D-glucopyranoside and phylangenin-25-O-beta-D- glucopyranoside and alkaloid, extracted from the whole plant of Phyllanthus niruri, were tested for minimum inhibitory concentration (MICs) against Staphylococus aureus, Staphylococus pyrogenes, Escherichia coli, Salmonella typhi and Klebsiella pneumoniae. MIC of saponin against S. aureus SSH22 and SSH23 ranged from 5-15 mu g/mL, and against E. coli OAUTH71 and K. pneumoniae OAUTH 54, from 15-60 mu g/mL. MICs increased with the increase in concentration of cells used in the inoculum. S. aureus SSH22 exhibited a paradoxical biphasic response to saponin in nutrient broth, whereas bacterial activity against E. coli SSH31 increased with concentration up to the highest concentration of saponin tested. Activity against E. coli OAUTH71 was more pronounced in the phosphate-buffered saline than in the nutrient broth. The other active compound extracted (alkaloid) gave MIC values between 200 and 600 mu g/mL. (author)

  12. Granitoid emplacement during syn-convergent transtension: An example from the Huamenlou pluton in North Qinling, central China

    Directory of Open Access Journals (Sweden)

    Yang Li

    2018-01-01

    Full Text Available The Huamenlou pluton, is an elongated granite intrusion with high aspect ratio, emplaced within the southern margin of the North Qinling (central China. Here we investigate this pluton through multiple techniques including the fabric study, microstructural observation and zircon geochronology. Our zircon U–Pb data confirm that the granite crystallized at ca. 462 Ma which is consistent with the ages of other linear plutons in North Qinling. Microstructural observations of the Huamenlou granites illustrate that the pluton has undergone superimposed deformation during its emplacement, from magmatic to high-temperature solid state conditions. The internal fabric obtained by anisotropy of magnetic susceptibility (AMS and shape preferred orientation (SPO show similar results. The fabrics are relatively concordant and generally vary from NE–SW to NEE–SWW which are roughly oblique to the trend of the pluton elongation and the regional structures. Meanwhile, scalar parameters reflect two completely different strain regimes for the pluton and its host rocks, i.e., the fabrics within host rocks are mainly oblate while the central part of the intrusion displays mainly prolate fabrics. It is inferred that the structural pattern recorded in this pluton was caused by local dextral transtension in consequence of oblique convergence between the South and North China Blocks. We propose that the local transtension in convergence setting probably evolved from vertical extrusion tectonics that provided room for the magma emplacement and imparted prolate fabrics in the Huamenlou pluton.

  13. Granitic magma emplacement and deformation during early-orogenic syn-convergent transtension: The Stare Sedlo complex, Bohemian Massif

    Czech Academy of Sciences Publication Activity Database

    Tomek, Filip; Žák, J.; Chadima, Martin

    2015-01-01

    Roč. 87, JUL (2015), s. 50-66 ISSN 0264-3707 Institutional support: RVO:67985831 Keywords : anisotropy of magnetic susceptibility (AMS) * Bohemian Massif * pluton emplacement * granite * transtension * Variscan orogeny Subject RIV: DB - Geology ; Mineralogy Impact factor: 1.926, year: 2015

  14. Assessment of recent outbreaks of Dickeya sp (syn. Erwinia chrysanthemi) slow wilt in potato crops in Israel

    NARCIS (Netherlands)

    Tsror, L.; Erlich, O.; Lebiush, S.; Hazanovsky, M.; Zig, U.; Slawiak, M.; Grabe, G.; Wolf, van der J.M.; Haar, van de J.J.

    2009-01-01

    Suspected Dickeya sp. strains were obtained from potato plants and tubers collected from commercial plots. The disease was observed on crops of various cultivars grown from seed tubers imported from the Netherlands during the spring seasons of 2004-2006, with disease incidence of 2-30% ( 10% in

  15. Neotectonics of the Roer Valley rift system; style and rate of crustal deformation inferred from syn-tectonic sedimentation

    NARCIS (Netherlands)

    Berg, van den M.W.

    1995-01-01

    River sediments of the Meuse, Rhine and local Belgian systems have been preserved in various parts of the Roer Valley rift. Age-altitude positions of Meuse terraces provide a detailed record of neotectonic regional uplift. It shows accelerations and decelerations superimposed on a long-term average

  16. Laboratory evaluation of a new strain CCM 8367 of Isaria fumosorosea (syn. Paecilomyces fumosoroseus) on Spodoptera littoralis (Boisd.)

    Czech Academy of Sciences Publication Activity Database

    Hussein, Hany; Zemek, Rostislav; Habuštová, Oxana; Prenerová, Eva; Adel, M. M.

    2013-01-01

    Roč. 46, č. 11 (2013), s. 1307-1319 ISSN 0323-5408 R&D Projects: GA MŠk 2B06005 Institutional support: RVO:60077344 Keywords : entomopathogenic fungi * Isaria fumosorosea * CCM 8367 Subject RIV: GF - Plant Pathology, Vermin, Weed, Plant Protection

  17. 17 børns syn på skolen i skoleåret 2016-2017

    DEFF Research Database (Denmark)

    Broström, Stig

    , at pigerne er målrettede og opgaveorienterede, mens drengene er larmende og vil være hurtigt færdige. Men når de har givet det generaliserende svar, tager de sig selv i det og reflekterer over, at det faktisk kommer an på personen. De hæver sig altså op over det stereotype billede af drenge og piger«. »Jeg...... konflikter. Pigerne går mere i detaljer og diskuterer for eksempel farven på opgavens omslag. Det, synes drengene, er latterligt«. Det ligner, at de fleste elever giver udtryk for en meget traditionel opfattelse af, at drengene larmer, og pigerne arbejder hårdere? »Ja, det kan man godt sige. Men drengene er...... har brug for mere kropslig aktivitet. Det siger noget om, at reformen kalder på mere bevægelse. Men det er ikke rigtig lykkedes«. Hvad er status på reformen blandt eleverne? »Generelt er alle glade for at gå i skole. De synes, det er dejligt at lære noget. Men det bliver rigtig spændende at gå i skole...

  18. Syn-kinematic palaeogeographic evolution of the West European Platform: correlation with Alpine plate collision and foreland deformation

    NARCIS (Netherlands)

    Sissingh, W.

    Sequence stratigraphic correlations indicate that intermittent changes of the kinematic far-field stress-field regimes, and the associated geodynamic re-organisations at the plate-tectonic contacts of the African, Apulian, Iberian and European plates, affected the Tertiary palaeogeographic evolution

  19. Controls and measurements of KU engine test cells for biodiesel, SynGas, and assisted biodiesel combustion

    Science.gov (United States)

    Cecrle, Eric Daniel

    This thesis is comprised of three unique data acquisition and controls (CDAQ) projects. Each of these projects differs from each other; however, they all include the concept of testing renewable or future fuel sources. The projects were the following: University of Kansas's Feedstock-to-Tailpipe Initiative's Synthesis Gas Reforming rig, Feedstock-to-Tailpipe Initiative's Biodiesel Single Cylinder Test Stand, and a unique Reformate Assisted Biodiesel Combustion architecture. The main responsibility of the author was to implement, develop and test CDAQ systems for the projects. For the Synthesis Gas Reforming rig, this thesis includes a report that summarizes the analysis and solution of building a controls and data acquisition system for this setup. It describes the purpose of the sensors selected along with their placement throughout the system. Moreover, it includes an explanation of the planned data collection system, along with two models describing the reforming process useful for system control. For the Biodiesel Single Cylinder Test Stand, the responsibility was to implement the CDAQ system for data collection. This project comprised a variety of different sensors that are being used collect the combustion characteristics of different biodiesel formulations. This project is currently being used by other graduates in order to complete their projects for subsequent publication. For the Reformate Assisted Biodiesel Combustion architecture, the author developed a reformate injection system to test different hydrogen and carbon monoxide mixtures as combustion augmentation. Hydrogen combustion has certain limiting factors, such as pre-ignition in spark ignition engines and inability to work as a singular fuel in compression ignition engines. To offset these issues, a dual-fuel methodology is utilized by injecting a hydrogen/carbon monoxide mixture into the intake stream of a diesel engine operating on biodiesel. While carbon monoxide does degrade some of the desirable properties of hydrogen, it acts partially like a diluent in order to prevent pre-ignition from occurring. The result of this mixture addition allows the engine to maintain power while reducing biodiesel fuel consumption with a minimal NOx emissions increase.

  20. Seismic evidence for arc segmentation, active magmatic intrusions and syn-rift fault system in the northern Ryukyu volcanic arc

    Science.gov (United States)

    Arai, Ryuta; Kodaira, Shuichi; Takahashi, Tsutomu; Miura, Seiichi; Kaneda, Yoshiyuki

    2018-04-01

    Tectonic and volcanic structures of the northern Ryukyu arc are investigated on the basis of multichannel seismic (MCS) reflection data. The study area forms an active volcanic front in parallel to the non-volcanic island chain in the eastern margin of the Eurasian plate and has been undergoing regional extension on its back-arc side. We carried out a MCS reflection experiment along two across-arc lines, and one of the profiles was laid out across the Tokara Channel, a linear bathymetric depression which demarcates the northern and central Ryukyu arcs. The reflection image reveals that beneath this topographic valley there exists a 3-km-deep sedimentary basin atop the arc crust, suggesting that the arc segment boundary was formed by rapid and focused subsidence of the arc crust driven by the arc-parallel extension. Around the volcanic front, magmatic conduits represented by tubular transparent bodies in the reflection images are well developed within the shallow sediments and some of them are accompanied by small fragments of dipping seismic reflectors indicating intruded sills at their bottoms. The spatial distribution of the conduits may suggest that the arc volcanism has multiple active outlets on the seafloor which bifurcate at crustal depths and/or that the location of the volcanic front has been migrating trenchward over time. Further distant from the volcanic front toward the back-arc (> 30 km away), these volcanic features vanish, and alternatively wide rift basins become predominant where rapid transitions from normal-fault-dominant regions to strike-slip-fault-dominant regions occur. This spatial variation in faulting patterns indicates complex stress regimes associated with arc/back-arc rifting in the northern Okinawa Trough.[Figure not available: see fulltext.

  1. Ny politikk på diabetesfeltet? Nøkkelinformanters syn på dagens og morgendagens tilbud

    Directory of Open Access Journals (Sweden)

    Christina Foss

    2016-12-01

    Health care service for patients with chronic diseases has undergone fundamental changes in recent years: focus on self-management, de-centralisation to municipals with an emphasis on prevention and an urge for interdisciplinary and intersectoral collaboration. In the operationalization of the political signals to specific measures in the field, key actors’ understanding influences the formulation of policy. As part of a larger international study (EU-Wise qualitative semi-structural interview was performed with 15 informants who hold key positions with an ability to influence the specific implementation of health policy for people with type 2 diabetes. The key informants showed abundant variation in what they saw as important challenges and measures. The informants have few descriptions of initiatives to fight social inequalities and were vague in their descriptions of measures that are not individual-oriented. The vagueness may indicate the need for more specific recommendations of measures in the field

  2. N-Phenyl-2-p-tolylthiazole-4-carboxamide derivatives: Syn-thesis and cytotoxicity evaluation as anticancer agents

    Directory of Open Access Journals (Sweden)

    Ahmad Mohammadi-Farani

    2014-07-01

    Conclusion: A new series of phenylthiazole derivatives were synthesized and their anticancer activity was assessed against cancerous cell lines. More structural modifications and derivatization is necessary to achieve to the more potent compounds.       

  3. Facile and Highly Diastereoselective Synthesis of syn- and cis-1,2-Diol Derivatives from Protected alpha-Hydroxy Ketones

    Czech Academy of Sciences Publication Activity Database

    Jahn, Emanuela; Smrček, Jakub; Pohl, Radek; Císařová, I.; Jones, P. G.; Jahn, Ullrich

    2015-01-01

    Roč. 2015, č. 35 (2015), s. 7785-7798 ISSN 1434-193X Grant - others:COST(XE) CM1201 Institutional support: RVO:61388963 Keywords : synthetic methods * reduction * diastereoselectivity * diols * ketones Subject RIV: CC - Organic Chemistry Impact factor: 3.068, year: 2015

  4. Characterization of pollutants cycles evolution in a coastal mediterranean area under summer conditions; Caracterizacion de ciclos de evolucion de contaminantes en una zona costera mediterranea en situaciones de verano

    Energy Technology Data Exchange (ETDEWEB)

    Plaza, J; Artinano, B

    1994-07-01

    This work performs a jointly interpretation of meteorological and pollutant concentration measurements during three experimental campaigns in the coastal and inland zones of Castellon, in summer time and prevailing local conditions. Thermal origin circulations, sea and land breezes, slope and valley winds, and local topography, give rise to daily cycle recirculation of pollutants, both at surface and higher levels. Related to the associated ozone levels, the observed natural background varies from 40-50 ppb, whom can be added 20-50 ppb as contribution by photochemical generation. This has been observed to be transported up to 100 Km inland and re-circulated again through the coastal Area. (Author) 7 refs.

  5. The quality of the diet of foxes (Vulpes vulpes in a Mediterranean coastal area (Central Italy / Qualità della dieta della Volpe Vulpes vulpes in un'area costiera mediterranea

    Directory of Open Access Journals (Sweden)

    Claudio Cavani

    1991-07-01

    Full Text Available Abstract The diet of foxes in the Natural Park of Maremma includes essentially Juniperus fruits and Arthropods, mainly Coleoptera and Orthoptera. These components were analysed in order to value their chemical nutritive. The following parameters were determined: proximate analysis (crude protein Nx6.25; ether extract; crude fibre; ash, aminoacids, and mineral contents. Juniperus berries are characterized by a low crude protein and ash content (1.83 and 2.75% on dry matter while the level of fibrous constituents, expressed in terms of crude fibre, occurs in relatively high quantities (30.8% on dry matter. By contrast, Orthoptera and Coleoptera show high crude protein content (67.3 and 57.8% on dry matter of average nutritive value (chemical score 0.52 and 0.51. The ash level is 68.8 and 76.6 g/kg on dry matter, with high phosphorus, iron and zinc content. Juniperus berries are a feed component of moderate energy level, while Arthropods seem to be an important mineral and protein source. Riassunto La dieta della Volpe (Vulpes vulpes nel Parco Naturale della Maremma è costituita essenzialmente da frutti di Ginepro e da Artropodi, soprattutto Coleotteri ed Ortotteri. Allo scopo di fornire una valutazione delle caratteristiche chimico-nutritive di questi componenti alimentari, sono stati analizzati diversi campioni della dieta. Sono stati determinati i parametri riguardanti le analisi standard per gli alimenti di uso zootecnico, il contenuto in aminoacidi e in elementi minerali. I frutti di Ginepro sono caratterizzati da uno scarso tenore in proteine grezze e in ceneri (1,83 e 2,75% della sostanza secca, mentre il contenuto in costituenti fibrosi, espressi in termini di fibra grezza, risulta relativamente elevato (30,8% della sostanza secca. Gli Ortotteri ed i Coleotteri mostrano invece un considerevole contenuto in proteine grezze (67,3 e 57,8% della sostanza secca, di valore nutritivo medio (punteggio chimico 0,52 e 0,51. I1 contenuto in ceneri è pari a 68,8 e 76,6 g/kg di sostanza secca, con abbondanti apporti in fosforo, ferro e zinco. Nell'ambito della dieta della Volpe, i frutti di Ginepro sono un componente alimentare a moderato apporto energetico, mentre gli Artropodi sembrano costituire un importante elemento di riequilibrio alimentare di natura proteica e minerale.

  6. Views on quality assurance at Finnish and Swedish nuclear power plants and at Halden Reactor; Syn paa kvalitetssaekring vid finlaendska och svenska kaernkraftverk samt vid Haldenreaktorn

    Energy Technology Data Exchange (ETDEWEB)

    Hammar, L.; Lidh, B. [ES-konsult (Sweden); Wahlstroem, B.; Reiman, T. [VTT Automation (Finland)

    2001-06-01

    The paper reports on a study within the Nordic Nuclear Safety Research, NKS on quality systems at nuclear installations in Finland, Norway and Sweden. In the study a total of 74 people at the NPPs in Barsebaeck, Forsmark, Loviisa, Olkiluoto, Oskarshamn and Ringhals, and at the research reactor in Halden were interviewed in the period 30 August to 13 December 2000 concerning their views in regard of quality and quality systems. The study was concluded with a seminar held in the Ringhals nuclear power plant in Januar 2001. The study covered a number of aspects in regard of quality management, including the quality concept, quality systems, topical quality issues and approaches, rules and procedures, competency and training, the process approach to quality management, the promotion of quality consciousness and future prospects. The study reflects the significant progress made in the management of quality in nuclear power in the Nordic countries since the early phase in the seventies. The most distinctive characteristic of today's approach to quality is seen in that responsibility for the quality is assumed directly in conjunction with the working processes. It could be noted that the work patterns at the nuclear installations have been largely modified during the recent years as a result of persistent endeavours to continuously improve the quality of operation. Challenges were seen in currently reduced revenues due to descending electricity prices and the likely prospect of further increased regulatory safety requirements. The report is aimed for those working with quality issues at the nuclear power plants as well as for those interested in quality management in general or in the safety aspects of nuclear power in particular. (au)

  7. Stock density and fruit yield of African walnut, Plukenetia conophora Mull-Arg (Syn. Tetracarpidium conophorum in tropical lowland rainforests of southwest Nigeria

    Directory of Open Access Journals (Sweden)

    TO Amusa

    2014-12-01

    Full Text Available Despite the huge socio-economic potentials of the African walnut, Plukenetia conophora Mull-Arg, there is a dearth of information on stock density and yield studies under different site conditions. Therefore, this study was carried out to investigate the stock density and fruit yields of P. conophora in three different habitats (i.e. less disturbed natural forest, recently disturbed natural forest and plantation forest within Omo Forest Reserve (OFR and Shasha Forest Reserve (SFR of Nigeria. Stratified random sampling technique was used to carry out inventory survey. Fruit yields were determined by collecting fruit falls through double sampling approach. Both descriptive and inferential statistics were used in analyzing the data at P = 0.05. Stock densities of P. conophora were 5.33+1.7stands/ha, 14.67+2.05stands/ha and 16.00+2.94stands/ha in OFR, while they were 7.33+0.47stands/ha, 14.67+1.25stands/ha and 10.67+04.7stands/ha in SFR for recently disturbed forest, less disturbed forest and plantation forest respectively. There were significant differences in number and distribution of species by forest types, but not between forest reserves. The mean yield of P. conophora/ha/yr was estimated at 7,800.00kg for OFR and 6,534.00kg for SFR. Yields from plantation area contributed more in OFR, while yields from less disturbed natural forest area were higher in SFR. Yields from recently disturbed natural forest were consistently lower in the two reserves. These results show that P. conophora thrives better in plantation and old re-growth forests. This information is pertinent towards improving the management of the species, increase its productivity and enhance benefits in a more sustainable manner to the rural populace.

  8. Control óptimo de par para máquinas SynRM aplicadas a vehículo eléctrico

    OpenAIRE

    Trancho, Elena; Ibarra Basabe, Edorta; Arias Pujol, Antoni; Kortabarria, Iñigo

    2017-01-01

    Las máquinas de reluctancia síncrona asistidas por imanes están atrayendo un considerable interés como alternativa a las máquinas síncronas de imanes permanentes para su uso en sistemas de propulsión de vehículos eléctricos. El control óptimo de estas máquinas (incluyendo operación en debilitamiento de campo) puede resultar complejo, ya que estas son, por lo general, muy sensibles al fenómeno de la saturación magnética. En este artículo se trata su control, desde los reguladores hasta el prec...

  9. High morphological plasticity and global geographical distribution ofthe Pacific broad tapeworm Adenocephalus pacificus (syn.Diphyllobothrium pacificum): Molecular and morphological survey

    Czech Academy of Sciences Publication Activity Database

    Hernández-Orts, Jesús S.; Scholz, Tomáš; Brabec, Jan; Kuzmina, T.; Kuchta, Roman

    2015-01-01

    Roč. 149, SEP 2015 (2015), s. 168-178 ISSN 0001-706X R&D Projects: GA ČR GAP506/12/1632 Institutional support: RVO:60077344 Keywords : biogeography * Cestoda * cox1 * lsrDNA * helminth * Diphyllobothriidea * diphyllobothriosis * phylogeny * Pseudophyllidea * seals Subject RIV: EG - Zoology Impact factor: 2.380, year: 2015

  10. Restauration des propriétés mécaniques originelles des sédiments repris en glissements synsédimentaires (slumping)

    OpenAIRE

    Nguyen Cong , Nghia

    2007-01-01

    The sedimentary modification in form of synsedimentary slumping is a witness of long-term geodynamic evolution of a sedimentary basin. This study of the Vocontian Basin (South-East of France), in paleogeographic context of submarine valley, tried to highlight the role of the initial properties of sediment in the phenomenon of submarine sliding. Main part of accomplished works concerns limestone-marl alternations and their modifications (slumps) during Hauterivian, particularly in the region o...

  11. Moestrupia oblonga gen. et comb. nov. (syn.: Gyrodinium oblongum), a new marine dinoflagellate genus characterized by light and electron microscopy, photosynthetic pigments and LSU rDNA sequence

    DEFF Research Database (Denmark)

    Hansen, Gert; Daugbjerg, Niels

    2011-01-01

    A small-sized, peridinin-containing, athecate dinoflagellate (13–17 µm long) was isolated into clonal culture from a water sample collected at a nearshore location in Tenerife, Spain (October 2004). Based on phenotypic characters (size, shape, pyrenoid and nucleus position), the culture was ident...... the anterior part of the ventral flange to the middorsal side of the episome. Thus, it differs markedly from that in species of Gyrodinium and emphasizes it being distantly related to this genus...

  12. The age, palaeoclimate, palaeovegetation, coal seam architecture/mire types, paleodepositional environments and thermal maturity of syn-collision paralic coal from Mukah, Sarawak, Malaysia

    Science.gov (United States)

    Sia, Say-Gee; Abdullah, Wan Hasiah; Konjing, Zainey; Koraini, Ahmad Munif

    2014-02-01

    The Mukah coal accumulated in the Balingian Formation where the time-stratigraphic position is poorly defined by fauna, though a probable Late Miocene age has always been assigned to this formation. Samples collected in the present study that yielded an abundance of Casuarina pollen associated with occurrences of Dacrydium, Stenochlaena palustris, Florschuetzia levipoli and also Stenochlaena areolaris spores, compare closely to zone PR9 of the palynological zonation of the Malay Basin, and can be tied to depositional sequences of Malay Basin Seismic sequences I2000/I3000, indicating an Early Miocene age for the studied coal. The Early Miocene age shows that the Mukah coal was formed during the collision between Luconia Block-Dangerous Grounds with the Borneo that lasted from Late Eocene to late Early Miocene. The rapid increase of deposition base-level caused by the collision is clearly reflected by the architecture of the Mukah coal seams that were generally thin, and also by the reverse order of the paleo-peat bodies.

  13. Ecological differentiation, lack of hybrids involving diploids, and asymmetric gene flow between polyploids in narrow contact zones of Senecio carniolicus (syn. Jacobaea carniolica, Asteraceae)

    Czech Academy of Sciences Publication Activity Database

    Hülber, K.; Sonnleitner, M.; Suda, Jan; Krejčíková, J.; Schönswetter, P.; Schneeweiss, G. M.; Winkler, M.

    2015-01-01

    Roč. 5, č. 6 (2015), s. 1224-1234 ISSN 2045-7758 R&D Projects: GA ČR GB14-36079G Institutional support: RVO:67985939 Keywords : gene flow * hybridization * polyploidy Subject RIV: EF - Botanics Impact factor: 2.537, year: 2015

  14. Constituents of the arial parts of Eupatorium odoratum L. ( Syn. Chromolaena odorata) (L.) R.M. King And H Robinson), family compositae-grown in Vietnam

    NARCIS (Netherlands)

    Trang, N.T.D.; Phuong, L.V.N.; Dung, N.X.; Leclercq, P.A.; Wanner, M.J.; Koomen, C.J.; Fokkens, R.

    1994-01-01

    Eupatorium odoratum (L.), Family Compositae grows very fast in various places of the world, especially in tropical countries. This plant belonges to one of the worst plants. Some applications of this plant used for treatment of diseases such as disrrhoea, dysentery and scabies have been found in

  15. Proffs eller nördar : En kvalitativ studie om samhällets syn på e-sport

    OpenAIRE

    Edqvist, Patrick

    2013-01-01

    Despite the vast research on the effects of gaming, little is know how the phenomenon of e-sports and it’s followers is portrayed. While media can have significant impact on what and how e-sport is portrayed, no studies have been done in a Swedish context. This thesis aims at filling that gap with investigations of the two major Swedish newspapers. Six articles was analyzed with critical discourse analysis with a theoretical base of journalism.The result of which indicated that between the pe...

  16. Historia är bäst på bio : Lärares syn på spelfilm som pedagogiskt redskap

    OpenAIRE

    Waller, Jennie

    2012-01-01

    This essay investigates how teacher sees and uses mainstream movies as a teaching method. The main question approached is: How does teachers use feature films as a teaching method? Which movies are used and how does their working methods surrounding the movies look like? The purpose of the essay is to make the reader reflect over what influence mainstream media has over the historic knowledge of the students and how teachers use that for educational purposes. The business around historical fi...

  17. Draft genome sequence of the yeast Starmerella bacillaris (syn., Candida zemplinina) FRI751 isolated from fermenting must of dried Raboso grapes

    DEFF Research Database (Denmark)

    Lemos Junior, Wilson Jose Fernandes; Treu, Laura; da Silva Duarte, Vinicius

    2017-01-01

    Starmerella bacillaris is an ascomycetous yeast commonly present in enological environments. Here, we report the first draft genome sequence of S. bacillaris FRI751, which will facilitate the study of the characteristics of this interesting enological yeast.......Starmerella bacillaris is an ascomycetous yeast commonly present in enological environments. Here, we report the first draft genome sequence of S. bacillaris FRI751, which will facilitate the study of the characteristics of this interesting enological yeast....

  18. Musik som ett specialpedagogiskt verktyg för barns språkutveckling : Fem sydafrikanska pedagogers syn på musik som pedagogiskt verktyg

    OpenAIRE

    Johansson, Lina

    2014-01-01

    The purpose of this essay is to study if and how five South African educators work with music as a special pedagogical tool in children's language development. To achieve the purpose of this study, two research questions were created. As method, interviews of a qualitative character were chosen.  The aim of the method is to give the educators the opportunity to think about and use their own experience before answering the questions. The result shows that the South African educators are not us...

  19. 3,6-Bis(2-pyrazinyl)-1,2,4,5-tetrazin: Ein neuer mehrfunktioneller Ligand und sein syn,fac-konfigurierter Bis(tricarbonylchlororhenium)-Komplex

    Czech Academy of Sciences Publication Activity Database

    Sarkar, B.; Kaim, W.; Schleid, T.; Hartenbach, I.; Fiedler, Jan

    2003-01-01

    Roč. 629, - (2003), s. 1353-1357 ISSN 0044-2313 R&D Projects: GA MŠk OC D14.20; GA MŠk OC D15.10 Institutional research plan: CEZ:AV0Z4040901 Keywords : carbonyl ligands * heterocyclic ligands * rhenium Subject RIV: CF - Physical ; Theoretical Chemistry Impact factor: 1.127, year: 2003

  20. Myrcia splendens (Sw. DC. (syn. M. fallax (Rich. DC. (Myrtaceae Essential Oil from Amazonian Ecuador: A Chemical Characterization and Bioactivity Profile

    Directory of Open Access Journals (Sweden)

    Laura Scalvenzi

    2017-07-01

    Full Text Available In this study, we performed the chemical characterization of Myrcia splendens (Sw. DC. (Myrtaceae essential oil from Amazonian Ecuador and the assessment of its bioactivity in terms of cytotoxic, antibacterial, and antioxidant activity as starting point for possible applicative uses. M. splendens essential oil, obtained by hydro-distillation, was analyzed by Gas Chromatography-Mass Spectrometry (GC-MS and Gas Chromatography-Flame Ionization Detector (GC-FID: the major components were found to be trans-nerolidol (67.81% and α-bisabolol (17.51%. Furthermore, we assessed the cytotoxic activity against MCF-7 (breast, A549 (lung human tumor cell lines, and HaCaT (human keratinocytes non-tumor cell line through 3-(4,5-dimethyl-2-thiazolyl-2,5-diphenyl-2-H-tetrazolium bromide (MTT test: promising results in terms of selectivity and efficacy against the MCF-7 cell line (IC50 of 5.59 ± 0.13 μg/mL at 48 h were obtained, mainly due to α-bisabolol. Furthermore, antibacterial activity against Gram positive and negative bacteria were performed through High Performance Thin Layer Chromatography (HPTLC bioautographic assay and microdilution method: trans-nerolidol and β-cedren-9-one were the main molecules responsible for the low antibacterial effects against human pathogens. Nevertheless, interesting values of Minimum Inhibitory Concentration (MIC were noticeable against phytopathogen strains. Radical scavenging activity performed by HPTLC bioautographic and spectrophotometric 1,1-diphenyl-2-picrylhydrazyl (DPPH approaches were negligible. In conclusion, the essential oil revealed a good potential for plant defense and anti-cancer applications.

  1. The Hypocrea jecorina (syn. Trichoderma reesei) lxr1 gene encodes a D-mannitol dehydrogenase and is not involved in L-arabinose catabolism

    NARCIS (Netherlands)

    Metz, Benjamin; de Vries, Ronald P; Polak, Stefan; Seidl, Verena; Seiboth, Bernhard

    2009-01-01

    The Hypocrea jecorina LXR1 was described as the first fungal L-xylulose reductase responsible for NADPH dependent reduction of L-xylulose to xylitol in L-arabinose catabolism. Phylogenetic analysis now reveals that LXR1 forms a clade with fungal D-mannitol 2-dehydrogenases. Lxr1 and the orthologous

  2. An assessment of Osmia rufa (syn. bicornis) as a pollinator of the sour cherry (Prunus cerasus) cv. Stevnsbaer in eastern Denmark

    DEFF Research Database (Denmark)

    Hansted, Lise; Grout, Brian William Wilson; Toldam-Andersen, Torben Bo

    2014-01-01

    . The remaining 8 pollen types were from entomophilous plants. Based on the results it is estimated that a mean of 220,000 O. rufa cocoons would be needed per hectare if the species were to be an effective, supplementary pollinator of P. cerasus cv. Stevnsbaer. Practical, economic and environmental considerations...... investigates the activity and food preferences of this species during flowering of sour cherry (P. cerasus cv. Stevnsbaer). Female O. rufa provisioned a mean of 2.96 ± 1.44 cells each with 6.24 ± 1.46 pollen types during the receptive period of flowering . In all 17 different pollen types were collected...... of which the most dominant were Salix (41.4% ± 9.34%) and Acer (33.24% ± 8.81%), followed by Betula (8.16% ± 5.08%), P. cerasus (8.16% ± 1.79%) and Fagus (3.56% ± 1.96%). P. cerasus was present in all samples. Nine pollen types were from anemophilous plants and represented 87.94% of the pollen collected...

  3. THE BRECCE DELLA RENGA FORMATION: AGE AND SEDIMENTOLOGY OF A SYN-TECTONIC CLASTIC UNIT IN THE UPPER MIOCENE OF CENTRAL APENNINES. INSIGHTS FROM FIELD GEOLOGY

    Directory of Open Access Journals (Sweden)

    SIMONE FABBI

    2014-07-01

    Full Text Available In the NE Simbruini Mountains, the “Brecce della Renga Fm.” is a clastic unit documenting sedimentation controlled by late Miocene extensional tectonics.The unit has been subdivided into three lithofacies and six sublithofacies, based on the arenite/rudite/pelite ratio. Massive and coarser (up to megablock size intervals are interpreted as rockfall deposits (likely induced by earthquakes at the toe of steep submarine escarpments. By contrast, finer levels are interpreted as having been sedimented through avalanching and turbidity flows in more distal settings, and are partly lateral to basinal hemipelagites and siliciclastic turbidites. Pelite lenses, found at various stratigraphic levels, are the result of ponded sedimentation along the clastic margin. Calcareous nannofossils analyses have been performed for age determinations on 60 fossiliferous samples, which were collected in each sublithofacies of the “Brecce della Renga Fm.”. The unit ranges from early Tortonian (MNN8b to early Messinian (MNN11c. The age and field geometries of the older breccias document the existence of a Tortonian extensional phase, which predated the late Messinian thrusting. A progradation of the clastic wedge can be observed in the Tortonian, while Messinian deposits show a fining upwards trend. The distribution curve of clastics over time can, given the number of synsedimentary faults mapped in the area, be put in relation with the seismicity induced by the activity along such faults, which after reaching an acme in the Tortonian gradually reached a quiescent state in the early Messinian, causing the backstepping of clastic facies.

  4. Geochronology, petrogenesis and tectonic settings of pre- and syn-ore granites from the W-Mo deposits (East Kounrad, Zhanet and Akshatau), Central Kazakhstan

    Science.gov (United States)

    Li, GuangMing; Cao, MingJian; Qin, KeZhang; Evans, Noreen J.; Hollings, Pete; Seitmuratova, Eleonora Yusupovha

    2016-05-01

    There is significant debate regarding the mineralization ages of the East Kounrad, Zhanet and Akshatau W-Mo deposits of Central Kazakhstan, and the petrogenesis and tectono-magmatic evolution of the granites associated with these deposits. To address these issues, we present molybdenite Re-Os dating, zircon U-Pb dating, whole rock geochemistry as well as Sr-Nd-Pb and zircon O-Hf isotopic analyses on the pre-mineralization and ore-forming granites. U-Pb dating of zircons from pre-mineralization granitic rocks yield Late Carboniferous ages of 320-309 Ma, whereas ore-forming granites have Early Permian ages of 298-285 Ma. Molybdenite Re-Os isotopic data indicate a mineralization age of 296 Ma at East Kounrad, 294 Ma at Akshatau and 285 Ma at Zhanet. The pre-ore and ore-forming granites are high-K calc-alkaline, metaluminous to slightly peraluminous I-type granites. The pre-mineralization granites are relatively unfractionated, whereas the ore-forming granites are highly fractionated. The fractionating mineral phases are probably K-feldspar, apatite, Ti-bearing phases and minor plagioclase. The pre-mineralization and ore-forming rocks are characterized by similar Sr-Nd-Pb-Hf-O isotopic compositions ((87Sr/86Sr)i = 0.70308-0.70501, εNd (t) = - 0.5 to + 2.8, 207Pb/204Pb = 15.60-15.82, zircon εHf (t) = + 1.2 to + 15.6 and δ18O = + 4.6 to + 10.3‰), whole rock TDMC (Nd) (840-1120 Ma) and zircon TDMC (Hf) (320-1240 Ma). The isotopic characteristics are consistent with a hybrid magma source caused by 10-30% assimilation of ancient crust by juvenile lower crust. The geochronology and geochemistry of these granites show that the Late Carboniferous pre-mineralization granitic rocks formed during subduction, whereas the Early Permian ore-forming, highly fractionated granite probably underwent significant fractionation with a restite assemblage of K-feldspar, apatite, Ti-bearing phases and minor plagioclase and developed during collision between the Yili and Kazakhstan terranes commenced at the latest Late Carboniferous.

  5. South African report of first case of chromoblastomycosis caused by Cladosporium (syn Cladophialophora) carrionii infection in a cat with feline immunodeficiency virus and lymphosarcoma.

    Science.gov (United States)

    Zambelli, Anthony B; Griffiths, Catherine A

    2015-04-01

    This report describes a 6-year-old neutered male feline immunodeficiency-positive cat with repeated abdominal and thoracic effusions. The cat was diagnosed with and treated for lymphosarcoma but remission was short-lived and, on re-evaluation, a fungal peritoneal exudate was noted. Cytology of the organisms is described and the culture elucidated Cladosporium carrionii, an important cause of chromoblastomycosis. Treatment with itraconazole was unsuccessful in this case. © ISFM and AAFP 2014.

  6. Magnetic fabrics of the syn to post orogenic granite suites of the Brusque metamorphic complex (Dom Feliciano Belt, Santa Catarina, Brasil

    International Nuclear Information System (INIS)

    Steenken, A; Basei, M.; Lopez de Luchi, M.

    2007-01-01

    The Dom Feliciano belt in southern Brazil and Uruguay has accommodated the collision between the cratons of Kalahari and Congo versus the Luis Alves microplate as a fragment of the Rio de La Plata craton during the Rio Doce orogeny in the late Neoproterozoic. The Sierra Ballena - Major Gercino shear zone was interpreted as the suture between the cratons. In the state of Santa Catarina three suites of highly evolved granites intruded the Brusque metamorphic complex in the northwest of the Major Gercino shear zone. Magmatic contacts between the different suites denote to their close temporal intrusion sequence. Shear zone activity is documented by local low temperature brittle deformation of the intrusive suites. Fabrics of the granites were obtained by the measurement of the anisotropy of the magnetic susceptibility (AMS). Low bulk susceptibilities (Kvol -6 SI) and a low degree of the total anisotropy (P' < 1.07) suggest a paramagnetic origin of the magnetic fabrics that may be directly correlated with the macroscopic rock fabric. Planar fabrics form a dome-like foliation pattern for the main Valsungana intrusion occupying the southwestern part of the NE-SW elongated intrusion. Linear fabrics show a weakly defined ENE-WSW trend parallel to the late stage transcurrent extension of the basement. It is suggested that a number of dome-like intrusions that follow the trend of the Major Gercino shear zone in the northwest were emplaced and subsequently amalgamated in the course of magma ascent leading to present outcrop shape of the intrusive complex

  7. Temporal constraints on the kinematics of the destabilization of an orogen : syn- to post-orogenic extensional collapse of the Northern Aegean region

    NARCIS (Netherlands)

    Lips, A.L.W.

    1998-01-01

    The Mediterranean region is situated at the interface of the African and Eurasian plates and has been shaped by the Alpine Orogeny and the subsequent post-orogenic extension during the convergence and collision of the African and Eurasian plates. Numerous tectonic studies have focussed on the role

  8. Temporal constraints on the kinematics of the destabilization of an orogen : syn- to post-orogenic extensional collapse of the Northern Aegean region

    NARCIS (Netherlands)

    Lips, A.L.W.

    1998-01-01

    The Mediterranean region is situated at the interface of the African and Eurasian plates and has been shaped by the Alpine Orogeny and the subsequent post-orogenic extension during the convergence and collision of the African and Eurasian plates. Numerous tectonic studies have focussed on the

  9. Design of a syndemic based intervention to facilitate care for men who have sex with men with high risk behaviour: the syn.bas.in randomized controlled trial

    NARCIS (Netherlands)

    Achterbergh, Roel C. A.; van der Helm, Jannie J.; van den Brink, Wim; de Vries, Henry J. C.

    2017-01-01

    Men who have sex with men (MSM) constitute a risk group for sexual transmitted infections (STIs), including HIV. Despite counselling interventions, risk behaviour remains high. Syndemic theory holds that psychosocial problems often co-occur, interact and mutually reinforce each other, thereby

  10. Ledarskap inom äldreomsorgen : En kvalitativ studie om chefernas syn på motivation till sina medarbetare och hur dessa ledarkunskaper förvärvas

    OpenAIRE

    Eriksson, Linda; Örnfjärd, Viveka

    2013-01-01

    The purpose of this essay was to explore how the first-line managers in eldercare motivate their employees. In addition, we intend to study how the first-line managers acquire their leadership skills. To find answers to this purpose, we asked ourselves the questions; how acquires first line managers knowledge of how to motivate their employees? What is the first-line manager’s perception of motivation against their employees? The method we used was qualitative interviews with eight first-line...

  11. Integrating multidisciplinary science, modelling and impact data into evolving, syn-event volcanic hazard mapping and communication: A case study from the 2012 Tongariro eruption crisis, New Zealand

    Science.gov (United States)

    Leonard, Graham S.; Stewart, Carol; Wilson, Thomas M.; Procter, Jonathan N.; Scott, Bradley J.; Keys, Harry J.; Jolly, Gill E.; Wardman, Johnny B.; Cronin, Shane J.; McBride, Sara K.

    2014-10-01

    New Zealand's Tongariro National Park volcanoes produce hazardous eruptions every few years to decades. On 6 August 2012 the Te Maari vent of Tongariro Volcano erupted, producing a series of explosions and a fine ash of minor volume which was dispersed rapidly to the east. This manuscript presents a summary of the eruption impacts and the way these supported science communication during the crisis, particularly in terms of hazard map development. The most significant proximal impact was damage from pyroclastic surges and ballistics to the popular and economically-important Tongariro Alpine Crossing track. The only hazard to affect the medial impact zone was a few mms of ashfall with minor impacts. Field testing indicated that the Te Maari ash had extremely low resistivity when wetted, implying a very high potential to cause disruption to nationally-important power transmission networks via the mechanism of insulator flashover. This was not observed, presumably due to insufficient ash accumulation on insulators. Virtually no impacts from distal ashfall were reported. Post-event analysis of PM10 data demonstrates the additional value of regional air quality monitoring networks in quantifying population exposure to airborne respirable ash. While the eruption was minor, it generated a high level of public interest and a demand for information on volcanic hazards and impacts from emergency managers, the public, critical infrastructure managers, health officials, and the agriculture sector. Meeting this demand fully taxed available resources. We present here aspects of the New Zealand experience which may have wider applicability in moving towards improved integration of hazard impact information, mapping, and communication. These include wide use of a wiki technical clearinghouse and email listservs, a focus on multi-agency consistent messages, and a recently developed environment of collaboration and alignment of both research funding and technical science advice. Hazard maps were integral to science communication during the crisis, but there is limited international best practice information available on hazard maps as communication devices, as most volcanic hazard mapping literature is concerned with defining hazard zones. We propose that hazard maps are only as good as the communications framework and inter-agency relationships in which they are embedded, and we document in detail the crisis hazard map development process. We distinguish crisis hazard maps from background hazard maps and ashfall prediction maps, illustrating the complementary nature of these three distinct communication mechanisms. We highlight issues that arose and implications for the development of future maps.

  12. Description and experimental transmission of Tetracapsuloides vermiformis n. sp (Cnidaria: Myxozoa) and guidelines for describing malacosporean species including reinstatement of Buddenbrockia bryozoides n. comb. (syn. Tetracapsula bryozoides)

    Czech Academy of Sciences Publication Activity Database

    Patra, Sneha; Hartigan, Ashlie; Morris, D.J.; Kodádková, Alena; Holzer, Astrid S.

    2017-01-01

    Roč. 144, č. 4 (2017), s. 497-511 ISSN 0031-1820 R&D Projects: GA ČR(CZ) GBP505/12/G112 Institutional support: RVO:60077344 Keywords : Buddenbrockia bryozoides n. comb. * Buddenbrockia plumatellae * Malacosporea * morphological variation * Myxozoa * species discrimination * taxonomy * Tetracapsuloides vermiformis n. sp. Subject RIV: EG - Zoology OBOR OECD: Zoology Impact factor: 2.713, year: 2016

  13. Playtime! : en studie av lärares syn på film som pedagogiskt hjälpmedel i historieämnet på gymnasiet

    OpenAIRE

    Hultkrantz, Catharina

    2014-01-01

    Showing movies to pupils is hardly a new, innovative teaching method. However, knowledge about how film is used and why, as well as what kind of film is used is scarce. In the present licentiate thesis, eight active teachers have been interviewed on their experiences with and approached to using film as a pedagogic tool in high school history lessons. The purpose of the study is to analyze the respective teachers´ use and understanding of history, based on their opinion of film as a didactic ...

  14. Immobilisation and characterisation of biocatalytic co-factor recycling enzymes, glucose dehydrogenase and NADH oxidase, on aldehyde functional ReSynTM polymer microspheres

    CSIR Research Space (South Africa)

    Twala, BV

    2012-03-01

    Full Text Available The use of enzymes in industrial applications is limited by their instability, cost and difficulty in their recovery and re-use. Immobilisation is a technique which has been shown to alleviate these limitations in biocatalysis. Here we describe...

  15. Geografilärares och niondeklassares syn på undervisningen om klimatförändringenClimate change education: Geography teachers’ and ninth-graders’ views

    Directory of Open Access Journals (Sweden)

    Mikaela Hermans

    2014-10-01

    Full Text Available It has been increasingly recognised that education plays a key role in addressing human-induced climate change. The ultimate goal of climate change education (CCE is positive impacts on the climate through both individual and collective actions. The aim of this study is to investigate geography teachers’ and their ninth-graders’ views about CCE. Data was collected using semi-structured interviews with geography teachers (N = 13 and questionnaires for ninth-graders (N = 549 at eleven secondary schools from all parts of Swedish-speaking Finland. The results show that although the students’ attitudes to CCE is positive, it does not supply them with action competence. The geography teachers in this study largely miss the ultimate goal of CCE, pointing at the need for more effort to be made in the process of developing CCE at secondary school.

  16. Chemical communication in termites: syn-4,6-dimethylundecan-1-ol as trail-following pheromone, syn-4,6-dimethylundecanal and (5E)-2,6,10-trimethylundeca-5,9-dienal as the respective male and female sex pheromones in Hodotermopsis sjoestedti (Isoptera, Archotermopsidae)

    Czech Academy of Sciences Publication Activity Database

    Lacey, M. J.; Sémon, E.; Krasulová, Jana; Sillam-Dusses, David; Robert, A.; Cornette, R.; Hoskovec, Michal; Žáček, Petr; Valterová, Irena; Bordereau, Ch.

    2011-01-01

    Roč. 57, č. 12 (2011), s. 1585-1591 ISSN 0022-1910 Institutional research plan: CEZ:AV0Z40550506 Keywords : sex-specific pheromone s * basal termites * classification * phylogenetic relationships * zootermopsis Subject RIV: CC - Organic Chemistry Impact factor: 2.236, year: 2011

  17. Assessment of in vitro antitumoral and antimicrobial activities of ...

    African Journals Online (AJOL)

    Assessment of in vitro antitumoral and antimicrobial activities of marine algae harvested from the eastern Mediterranean sea. ... African Journal of Biotechnology ... algal extracts obtained from the marine algae Scytosiphon lomentaria, Padina pavonica, Cystoseira mediterranea (Phaeophyceae), Hypnea musciformis and ...

  18. Pathogenesis of Cell Injury by Rickettsia conorii

    Science.gov (United States)

    1986-11-26

    Hotivenaiehel, M., A. Ottomani, 0. Raoult, M. Rouzaud, J.C. Manell1, and J. 3iimar. 19P84. Une forme grave de fievre boutonneuse and rlditerranpenne. Ann. Franc...Martin, V.C. Vincent, F. Sanz, A. Mateos, R. Querol, and J. Portugal. 1985. Formas graves de fiebre exantematica mediterranea. Anal isis prospectivo de ... de la fiebre exantematica mediterranea. Revista Espanola de Enfermedades del Aparato Digestivo (in press). 89. Ruiz, R., A.M. Martin, F. Sanz, A

  19. Notas sinonímicas em Lepturini sul-americanos (Coleoptera, Cerambycidae, Lepturinae Synonymical notes on South American Lepturini (Coleoptera, Cerambycidae, Lepturinae

    Directory of Open Access Journals (Sweden)

    Miguel A. Monné

    2004-12-01

    Full Text Available Novas sinonímias propostas: Strangalia flavocincta (Thomson, 1860 = Ophistomis tristis Melzer, 1922 syn. nov. = O. latifasciata Melzer, 1926 syn. nov.; Strangalia succincta (Redtenbacher, 1867 = O. auriflua Redtenbacher, 1867 syn. nov.; Strangalia melanura (Redtenbacher, 1867 = Euryptera dimidiata Redtenbacher, 1867 syn. nov.; Strangalia lyrata (Redtenbacher, 1867 = Ophistomis discophora Redtenbacher, 1867 syn. nov.; Strangalia fulvicornis (Bates, 1872 = Ophistomis variabilis Melzer, 1926 syn. nov. = O. flavovittata Melzer, 1926 syn. nov.; Strangalia melanophthisis (Berg, 1889 reval. = Euryptera melanura var. nigripennis Melzer, 1930 syn. nov.; Anastrangalia sanguinolenta (Linnaeus, 1761 (espécie introduzida na Argentina = Leptura bonaeriensis Burmeister, 1865 syn. nov.New synonyms proposed: Strangalia flavocincta (Thomson, 1860 = Ophistomis tristis Melzer, 1922 syn. nov. = O. latifasciata Melzer, 1926 syn. nov.; Strangalia succincta (Redtenbacher, 1867 = O. auriflua Redtenbacher, 1867 syn. nov.; Strangalia melanura (Redtenbacher, 1867 = Euryptera dimidiata Redtenbacher, 1867 syn. nov.; Strangalia lyrata (Redtenbacher, 1867 = Ophistomis discophora Redtenbacher, 1867 syn. nov.; Strangalia fulvicornis (Bates, 1872 = Ophistomis variabilis Melzer, 1926 syn. nov. = O. flavovittata Melzer, 1926 syn. nov.; Strangalia melanophthisis (Berg, 1889 reval. = Euryptera melanura var. nigripennis Melzer, 1930 syn. nov.; Anastrangalia sanguinolenta (Linnaeus, 1761 (species introduced in Argentina = Leptura bonaeriensis Burmeister, 1865 syn. nov.

  20. The genera of Nematinae (Hymenoptera, Tenthredinidae

    Directory of Open Access Journals (Sweden)

    Marko Prous

    2014-10-01

    Full Text Available Recent phylogenetic studies on Nematinae based on DNA sequences have shown extensive incongruencies with current nomenclature of genus-group taxa. Here, we expand previous DNA sequence datasets based on three genes (CoI, Cytb, and EF-1α, to include a fourth (NaK and more genera. The analyses largely confirm the previous findings, particularly the existence of two well-supported large clades, Euura and Pristiphora, together comprising more than 75% of the species of Nematinae. Basal relationships within these two clades remain poorly resolved, mirroring the difficulties in delimiting genera based on morphology. In addition, a moderately supported small clade, Nematus, is found. The relationships between the Euura, Pristiphora, and Nematus clades are uncertain. Therefore, to stabilize the nomenclature we treat these clades as genera. This taxonomic treatment results in numerous new combinations of species names. The following synonymies are proposed for the available genus-group names. Synonyms of Euura Newman, 1837: Cryptocampus Hartig, 1837, Euura Agassiz, 1848, Pontania Costa, 1852, syn. n., Epitactus Förster, 1854, syn. n., Amauronematus Konow, 1890, syn. n., Holcocneme Konow, 1890, syn. n., Pachynematus Konow, 1890, syn. n., Holcocnema Schulz, 1906, syn. n., Holcocnemis Konow, 1907, syn. n., Pteronidea Rohwer, 1911, syn. n., Pontopristia Malaise, 1921, syn. n., Brachycoluma Strand, 1929, syn. n., Decanematus Malaise, 1931, syn. n., Pikonema Ross, 1937, syn. n., Phyllocolpa Benson, 1960, syn. n., Eitelius Kontuniemi, 1966, syn. n., Gemmura E.L. Smith, 1968, Eupontania Zinovjev, 1985, syn. n., Larinematus Zhelochovtsev, 1988, syn. n., Polynematus Zhelochovtsev, 1988, syn. n., Bacconematus Zhelochovtsev, 1988, syn. n., Alpinematus Lacourt, 1996, syn. n., Epicenematus Lacourt, 1998, syn. n., Kontuniemiana Lacourt, 1998, syn. n., Lindqvistia Lacourt, 1998, syn. n., Luea Wei and Nie, 1998, syn. n., and Tubpontania Vikberg, 2010, syn. n. Synonyms

  1. Identification of Races 0 and 2 of Cladosporium fulvum (syn Passalora fulva) on Tomato in the Cinturón Hortícola de La Plata, Argentina

    OpenAIRE

    Rollán, María Cristina; Protto, Victoria; Medina, Rocío; López, Silvina Marianela Yanil; Vera Bahima, José; Ronco, Blanca Lía; Saparrat, Mario Carlos Nazareno; Balatti, Pedro Alberto

    2013-01-01

    Surveys aimed at evaluating the incidence and severity of a new disease that developed in greenhouses cultivated with tomato (Solanum lycopersicum L.) were performed during 2009 and 2010 in greenhouses of the cultivars Elpida (Enza Zaden) and Colibrí (Clause) in an area of tomato production known as the Cinturón Hortícola de La Plata (the “horticultural belt of La Plata”). The disease had a 100% prevalence and 90% incidence within the ten 250 m greenhouses that were monitored in 2009, 2010, a...

  2. ”På Facebook slipper man vara närvarande” : En studie kring unga vuxnas syn på användande, identitetsskapande och kvarlämnade digitala identiteter på Facebook

    OpenAIRE

    Michael, Carlsson; Lahdensuo, Jonna

    2009-01-01

    Bakgrund: Facebook är ett socialt onlinenätverk som under sina levnadsår har ökat explosionsartat i popularitet. På Facebook sköter många användare stora delar av sina sociala relationer och delar med sig mycket av sig själva. Det finns inget tidigare socialt nätverk i stil med Facebook som har haft samma genomslagskraft hos internetanvändarna. I användandet skapas en digital identitet som lämnar spår på Facebook, även om en användare är död. Kring dessa kvalämnade digitala identiteter vill v...

  3. Crustal melting and recycling: geochronology and sources of Variscan syn-kinematic anatectic granitoids of the Tormes Dome (Central Iberian Zone). A U-Pb LA-ICP-MS study

    Science.gov (United States)

    López-Moro, F. J.; López-Plaza, M.; Gutiérrez-Alonso, G.; Fernández-Suárez, J.; López-Carmona, A.; Hofmann, M.; Romer, R. L.

    2018-04-01

    In this study, we report U-Pb Laser Ablation ICP-MS zircon and ID-TIMS monazite ages for peraluminous granitoid plutons (biotite ± muscovite ± cordierite ± sillimanite) in the Tormes Dome, one of the gneiss-cored domes located in the Central Iberian Zone of the Variscan belt of northern Spain. Textural domains in zircon, interpreted to represent the magmatic crystallization of the granitoids (and one monazite fraction in the Ledesma pluton) yielded ages around 320 Ma, in agreement with other geochronological studies in the region. This age is interpreted to date the timing of decompression crustal melting driven by the extensional collapse of the orogenic belt in this domain of the Variscan chain of western Europe. In addition, there are several populations of inherited (xenocrystic) zircon: (1) Carboniferous zircon crystals (ca. 345 Ma) as well as one of the monazite fractions in the coarse-grained facies of the Ledesma pluton that also yielded an age of ca. 343 Ma. (2) Devonian-Silurian zircon xenocrysts with scattered ages between ca. 390 and 432 Ma. (3) Middle Cambrian-Ordovician (ca. 450-511 Ma). (4) Ediacaran-Cryogenian zircon ages (ca. 540-840 Ma). (5) Mesoproterozoic to Archaean zircon (900-2700 Ma). The abundance of Carboniferous-inherited zircon shows that crustal recycling/cannibalization may often happen at a fast pace in orogenic scenarios with only short lapses of quiescence. In our case study, it seems plausible that a "crustal layer" of ca. 340 Ma granitoids/migmatites was recycled, partially or totally, only 15-20 My after its emplacement.

  4. A blood-brain barrier (BBB) disrupter is also a potent α-synuclein (α-syn) aggregation inhibitor: a novel dual mechanism of mannitol for the treatment of Parkinson disease (PD).

    Science.gov (United States)

    Shaltiel-Karyo, Ronit; Frenkel-Pinter, Moran; Rockenstein, Edward; Patrick, Christina; Levy-Sakin, Michal; Schiller, Abigail; Egoz-Matia, Nirit; Masliah, Eliezer; Segal, Daniel; Gazit, Ehud

    2013-06-14

    The development of disease-modifying therapy for Parkinson disease has been a main drug development challenge, including the need to deliver the therapeutic agents to the brain. Here, we examined the ability of mannitol to interfere with the aggregation process of α-synuclein in vitro and in vivo in addition to its blood-brain barrier-disrupting properties. Using in vitro studies, we demonstrated the effect of mannitol on α-synuclein aggregation. Although low concentration of mannitol inhibited the formation of fibrils, high concentration significantly decreased the formation of tetramers and high molecular weight oligomers and shifted the secondary structure of α-synuclein from α-helical to a different structure, suggesting alternative potential pathways for aggregation. When administered to a Parkinson Drosophila model, mannitol dramatically corrected its behavioral defects and reduced the amount of α-synuclein aggregates in the brains of treated flies. In the mThy1-human α-synuclein transgenic mouse model, a decrease in α-synuclein accumulation was detected in several brain regions following treatment, suggesting that mannitol promotes α-synuclein clearance in the cell bodies. It appears that mannitol has a general neuroprotective effect in the transgenic treated mice, which includes the dopaminergic system. We therefore suggest mannitol as a basis for a dual mechanism therapeutic agent for the treatment of Parkinson disease.

  5. Use of spent mushroom substrates from Agaricus subrufescens (syn. A. blazei, A. brasiliensis) and Lentinula edodes productions in the enrichment of a soil-based potting media for lettuce (Lactuca sativa) cultivation: Growth promotion and soil bioremediation.

    Science.gov (United States)

    Ribas, L C C; de Mendonça, M M; Camelini, C M; Soares, C H L

    2009-10-01

    This study aimed to assess physicochemical and microbiological properties of fresh spent mushroom substrates (SMSs)--without post-crop heat treatment--from Agaricus subrufescens and Lentinula edodes production to optimize the use of these residues in the soil enrichment for lettuce growth promotion and soil remediation. Organic matter and C content of both SMSs were high. Fresh A. subrufescens SMS was a good source of N, P and K. On the other hand, L. edodes SMS presented a lower concentration of these nutrients and a high level of immaturity. Both SMSs presented high electric conductivity values (2.5-3.4 mS/cm). Microbiological analysis, based upon enumeration of culturable bacteria (thermophilic and mesophilic) and fungi, and also evolution of CO(2), showed that SMSs played higher microbial diversity than soil control. Laccase activity from A. subrufescens SMS tended to remain constant during a 2-month period, while L. edodes SMS presented low laccase activity throughout the same period. Agaricus subrufescens and L. edodes were able to grow on a PDA (Potato Dextrose Agar) media supplemented with different concentrations of atrazine (1-50 microg/ml), degraded the herbicide, attaining rates of 35% and 26%, respectively. On experiments of lettuce growth promotion using a soil-based potting media with different SMS rates, 5% and 10% (dw) rates of A. subrufescens SMS resulted in higher lettuce aerial dry weights than the rates of 25% and 40%, the chemical fertilization (NPK) and the control (soil). At 10% supplementation, lettuce aerial dry weight increased 2.2 and 1.3 times compared to the control and the NPK treatment, respectively. Protein content increased along with SMS rates. Fresh A. subrufescens SMS was an excellent supplement for lettuce growth promotion and showed potential for remediation of biocides possibly due to improved microbial diversity and enzymatic activity. Fresh L. edodes SMS was not a good fertilizer, at least under the conditions tested. However, microbiological analysis showed that promising results may be achieved when using fresh L. edodes SMS for soil remediation.

  6. Prevalence of Giardia sp. Cryptosporidium parvum and Cryptosporidium andersoni (syn. C. muris) [correction of Cryptosporidium parvum and Cryptosporidium muris (C. andersoni)] in 109 dairy herds in five counties of southeastern New York.

    Science.gov (United States)

    Wade, S E; Mohammed, H O; Schaaf, S L

    2000-11-01

    A cross-sectional study was undertaken to determine the prevalence of Giardia sp. (G. duodenalis group), Cryptosporidium parvum and Cryptosporidium andersoni (C. muris) [corrected] in dairy cattle in three different age groups, and to evaluate the association of age and season with prevalence. One hundred and nine dairy farms, from a total of 212 farms, in five counties of southeastern New York volunteered to participate. On these farms, 2943 fecal samples were collected from three defined age groups. The farms were randomly assigned for sampling within the four seasons of the year. Each farm was visited once during the study period from March 1993 to June 1994 to collect fecal samples. Demographic data on the study population was collected at the time of sampling by interviewing the farm owner or manager. At collection, fecal samples were scored as diarrheic or non-diarrheic, and each condition was later related to positive or negative infection with these parasites. Fecal samples were processed using a quantitative centrifugation concentration flotation technique and enumerated using bright field and phase contrast microscopy. In this study, the overall population prevalence for Giardia sp. was 8.9%; C. parvum, 0.9%; and C. muris, 1.1%. When considering animals most at the risk of infection (those younger than 6 months of age) Giardia sp. and C. parvum was found in 20.1 and 2.4% of the animals, respectively. Giardia sp. and C. muris were found in all age groups. There was no significant seasonal pattern of infection for any of these parasites.

  7. GreenSynFuels. Economical and technological statement regarding integration and storage of renewable energy in the energy sector by production of green synthetic fuels for utilization in fuel cells. Final project report

    Energy Technology Data Exchange (ETDEWEB)

    Lebaek, J. (Danish Technological Institute, Aarhus (Denmark)); Boegild Hansen, J. (Haldor Topsoee, Kgs. Lyngby (Denmark)); Mogensen, Mogens (Technical Univ. of Denmark, Risoe National Lab. for Sustainable Energy, Roskilde (Denmark)) (and others)

    2011-03-15

    The purpose of the project is to select and validate technology concepts for the establishment of a Danish production of green synthetic fuels primarily for fuel cells. The feasibility of the selected concepts is assessed trough a techno-economical calculation, which includes mass and energy balances and economics including CAPEX and OPEX assessments. It is envisioned by the project partners that a production of green synthetic fuels, such as methanol, can 1) bring stability to a future electricity grid with a high share of renewable energy, 2) replace fossil fuels in the transport sector, and 3) boost Danish green technology export. In the project, two technology concepts were derived through carefully considerations and plenum discussions by the project group members: Concept 1): Methanol/DME Synthesis based on Electrolysis assisted Gasification of Wood. Concept 2): Methanol/DME synthesis based on biogas temporarily stored in the natural gas network. Concept 1) is clearly the most favored by the project group and is therefore analyzed for its techno-economic feasibility. Using mass and energy balances the technical perspectives of the concept were investigated, along with an economic breakdown of the CAPEX and OPEX cost of the methanol production plant. The plant was technically compared to a traditional methanol production plant using gasified biomass. The project group has decided to focus on large scale plants, as the scale economics favor large scale plants. Therefore, the dimensioning input of the concept 1) plant is 1000 tons wood per day. This is truly a large scale gasification plant; however, in a methanol synthesis context the plant is not particularly large. The SOEC electrolyzer unit is dimensioned by the need of hydrogen to balance the stoichiometric ratio of the methanol synthesis reaction, which will result in 141 MW installed SOEC. The resulting methanol output is 1,050 tons methanol per day. In comparison to a traditional methanol synthesis plant operating on biomass gasification without electrolysis, the plant methanol output is doubled and the methanol production efficiency is boosted from 59 % to 71 %. The total plant efficiency was 81.6 %. The economic analysis revealed that green methanol can indeed be produced at prices very close to the current oil price. In the scenario using the present energy prices and assuming that the critical plant components were readily available, the methanol production was found to be 120 USD/barrel equivalents, which is very close to the current oil price. It can be concluded that the present report has shown that green methanol can indeed be produced at competitive prices and be used as step towards expanding the share of renewable in the energy system and especially in the transportation segment. Therefore, producing methanol from using electrolysis assisted gasification it is possible to produce green methanol from biomass with this ratio: 1,000 t wood = 1,053 t methanol at 120-170 USD/barrel equivalent (1.5 - 2 times the existing oil price - February 2010). (LN)

  8. Evidence for Nb-Ta Occurrences in the Syn-Tectonic Pan-African Mayo Salah Leucogranite (Northern Cameroon: Constraints from Nb-Ta Oxide Mineralogy, Geochemistry and U-Pb LA-ICP-MS Geochronology on Columbite and Monazite

    Directory of Open Access Journals (Sweden)

    Periclex Martial Fosso Tchunte

    2018-04-01

    Full Text Available The Mayo Salah pluton, which is located in the North-Cameroon domain of Central African Bold Belt (CAFB, is emplaced as a laccolith in volcano-sedimentary schists of Poli series, and displays features of Rare-metal Granite (RMG. It is made of two main rock groups: (1 the metaluminous barren muscovite granite (MsG and (2 the Nb-Ta bearing peraluminous leucogranite (MsL which expresses four subtypes. The evolved Rare-element MsL is subalkaline, slightly peraluminous (ASI = 1.01–1.21, and it displays flat REE chondrite-normalized patterns with a strong negative Eu anomaly (Eu/Eu* = 0.02–0.20. It belongs to the peraluminous low phosphorus Rare-element Granites and L-type igneous rocks, as shown by the relatively low Zr/Hf (4.8–14 and Nb/Ta (1.4–9.0 ratios and the positive slope of the Zr-Hf-Nb-Ta profile in spider diagrams. The rare-element-bearing mineral is represented by columbite-group minerals (CGM and other Nb-Ta-oxides (Nb-rutile and pyrochlore supergroup minerals. The CGM is classified as Mn-columbite, with Ta# and Mn# ratios increasing from core to rim. Two stages of mineralization are identified; the earliest stage (CGM-I consists in scattered tabular or prismatic euhedral grains that were related to magmatic fractionation. The latest stage (CGM-II is expressed as a Ta-rich Mn hydrothermal CGM episode represented as rims and/overgrowths around and/or as veinlet crosscutting CGM-I or in cleavage planes of muscovite. The U-Pb dating of columbite and monazite of the Mayo Salah leucogranite indicates a late-Neoproterozoic magmatic-hydrothermal mineralization event from 603.2 ± 5.3 to 581.6 ± 7.2 Ma, as consistent with both late D2 to D3 events that were recorded in the CAFB in Cameroon, and the associated continental collision environment. The Nb-Ta mineralization of the Mayo Salah pluton provides evidence for the presence of RMG in Northern Cameroon of CAFB, and its temporal association with the youngest period of metallogenic epoch of Nb-Ta-ore formation in Africa associated to Pan-African times.

  9. Investigation into the effects of trace coal syn gas species on the performance of solid oxide fuel cell anodes, PhD. thesis, Russ College of Engineering and Technology of Ohio University

    Energy Technology Data Exchange (ETDEWEB)

    Trembly, Jason P. [Ohio Univ., Athens, OH (United States). Russ College of Engineering and Technology

    2007-06-01

    Coal is the United States’ most widely used fossil fuel for the production of electric power. Coal’s availability and cost dictates that it will be used for many years to come in the United States for power production. As a result of the environmental impact of burning coal for power production more efficient and environmentally benign power production processes using coal are sought. Solid oxide fuel cells (SOFCs) combined with gasification technologies represent a potential methodology to produce electric power using coal in a much more efficient and cleaner manner. It has been shown in the past that trace species contained in coal, such as sulfur, severely degrade the performance of solid oxide fuel cells rendering them useless. Coal derived syngas cleanup technologies have been developed that efficiently remove sulfur to levels that do not cause any performance losses in solid oxide fuel cells. The ability of these systems to clean other trace species contained in syngas is not known nor is the effect of these trace species on the performance of solid oxide fuel cells. This works presents the thermodynamic and diffusion transport simulations that were combined with experimental testing to evaluate the effects of the trace species on the performance of solid oxide fuel cells. The results show that some trace species contained in coal will interact with the SOFC anode. In addition to the transport and thermodynamic simulations that were completed experimental tests were completed investigating the effect of HCl and AsH3 on the performance of SOFCs.

  10. Gelechiidae II (Gelechiinae: Gnorimoschemini)

    DEFF Research Database (Denmark)

    Huemer, Peter; Karsholt, Ole

    argentinae (Povolný, 1989) syn. n. of Phthorimaea operculella (Zeller, 1873); Opacopsis buvati Povolný, 1992 syn. n. of Ephysteris deserticolella (Staudinger, 1871); Doryphora? praticolella Christoph, 1872 as ssp. , syn. n. and Opacopsis gallica Povolný, 1992 syn. n. of Ephysteris insulella (Heinemann, 1870...

  11. Nature Identical Prosody

    DEFF Research Database (Denmark)

    Juel Henrichsen, Peter

    2012-01-01

    ; such as low naturalness (DiSyn) and dependence on huge amounts of background data (UnitSyn). We present a hybrid model based on high-level speech data. As preliminary tests show, prosodic models combining DiSyn style at the phone level with UnitSyn style at the supra-segmental levels may approach Unit...

  12. Autism-related behavioral abnormalities in synapsin knockout mice.

    Science.gov (United States)

    Greco, Barbara; Managò, Francesca; Tucci, Valter; Kao, Hung-Teh; Valtorta, Flavia; Benfenati, Fabio

    2013-08-15

    Several synaptic genes predisposing to autism-spectrum disorder (ASD) have been identified. Nonsense and missense mutations in the SYN1 gene encoding for Synapsin I have been identified in families segregating for idiopathic epilepsy and ASD and genetic mapping analyses have identified variations in the SYN2 gene as significantly contributing to epilepsy predisposition. Synapsins (Syn I/II/III) are a multigene family of synaptic vesicle-associated phosphoproteins playing multiple roles in synaptic development, transmission and plasticity. Lack of SynI and/or SynII triggers a strong epileptic phenotype in mice associated with mild cognitive impairments that are also present in the non-epileptic SynIII(-/-) mice. SynII(-/-) and SynIII(-/-) mice also display schizophrenia-like traits, suggesting that Syns could be involved in the regulation of social behavior. Here, we studied social interaction and novelty, social recognition and social dominance, social transmission of food preference and social memory in groups of male SynI(-/-), SynII(-/-) and SynIII(-/-) mice before and after the appearance of the epileptic phenotype and compared their performances with control mice. We found that deletion of Syn isoforms widely impairs social behaviors and repetitive behaviors, resulting in ASD-related phenotypes. SynI or SynIII deletion altered social behavior, whereas SynII deletion extensively impaired various aspects of social behavior and memory, altered exploration of a novel environment and increased self-grooming. Social impairments of SynI(-/-) and SynII(-/-) mice were evident also before the onset of seizures. The results demonstrate an involvement of Syns in generation of the behavioral traits of ASD and identify Syn knockout mice as a useful experimental model of ASD and epilepsy. Copyright © 2013 Elsevier B.V. All rights reserved.

  13. NOTE TASSONOMICHE E NOMENCLATORIALI SU ALCUNE SPECIE PALEARTICHE DI SIBINIA E TYCHIUS (COLEOPTERA, CURCULIONIDAE

    Directory of Open Access Journals (Sweden)

    Roberto Caldara

    2009-10-01

    Full Text Available In accordo con le disposizioni del codice internazionale di Nomenclatura Zoologica, vengono proposte otto azioni allo scopo di salvaguardare la stabilità della nomenclatura attuale di alcune specie della tribù Tychiini. seguendo le indicazioni dell’Articolo 23.9.1, Sibinia subelliptica Desbrochers, 1873 è considerato nomen protectum e Gymnetron schaumi Becker, 1864 è considerato nomen oblitum; Sibinia phalerata Gyllenhal, 1836 è considerato nomen protectum e Sibinia centromaculata Villa & Villa, 1835 è considerato nomen oblitum. Essendo presenti le condizioni richieste dall’articolo 75.3, vengono designati i neotipi dei seguenti taxa: Sibinia centromaculata Villa & Villa, 1835; Sybines pulchellus Desbrochers, 1875. Sono inoltre stabiliti i lectotypi di: Gymne­ tron schaumi Becker, 1864; Sibinia attalica Gyllenhal var. lateralis Desbrochers, 1895; Sibinia cinctella Desbrochers, 1898; Sibinia pozuelica Fuente, 1910; Tychius barceloni­cus Desbrochers, 1908; Tychius edentatus Desbrochers, 1895; Tychius pallidicornis Desbrochers, 1875; Tychius parvulus Stephens, 1831; Tychius seductor Desbrochers, 1908. Vengono proposte le seguenti nuove sinonimie: Sibinia bipunctata Kirsch, 1870 = Sibi­nia postsignata Voss, 1971 n. syn.; Sibinia exigua Faust = Sibinia cinctella Desbrochers, 1898 n. syn.; Sibinia femoralis Germar, 1824 = Sibinia attalica var. lateralis Desbrochers, 1895 n. syn. = Sibinia consanguinea Desbrochers, 1895 n. syn. = Sibinia attalica var. curtula Desbrochers, 1907 n. syn. = Sibinia dilataticollis Desbrochers, 1907 n. syn.= Sibinia seducta Desbrochers, 1907 n. syn. = Sibinia pozuelica Fuente, 1910 n. syn.; Si­binia pici Desbrochers = Sibinia otiosa Hustache, 1944 n. syn. = Sibinia praeventa Hustache, 1944 n. syn.; Sibinia subelliptica Desbrochers, 1873 = Sibinia schaumei Desbrochers, 1895 n. syn.; Sibinia unicolor Fåhraeus, 1843 = Sybines pulchellus Desbrochers, 1875 n. syn. = Sibinia ochreata Schilsky, 1912 n. syn

  14. Editors note, and Dedication

    Directory of Open Access Journals (Sweden)

    Laura Mugnai

    2011-12-01

    Full Text Available This Supplement to volume 50 of Phytopathologia Mediterranea contains original, peer reviewed research papers, prepared from presentations at the 7th International Workshop on Grapevine Trunk Diseases (IWGTD. This Workshop was held in Santa Cruz, Chile, 17–21 January 2010, and was organized by the International Council on Grapevine Trunk Diseases (ICGTD.  Publication of this Supplement has been financially assisted by the International Society for Plant Pathology (ISPP.This Supplementary Issue of Phytopathologia Mediterranea is dedicated to the memory of Dr Luigi Chiarappa, the founder and inspiration of the ICGTD.  

  15. Evaluating the relationship between amyloid-β and α-synuclein phosphorylated at Ser129 in dementia with Lewy bodies and Parkinson’s disease

    OpenAIRE

    Swirski, Marta; Miners, J Scott; de Silva, Rohan; Lashley, Tammaryn; Ling, Helen; Holton, Janice; Revesz, Tamas; Love, Seth

    2014-01-01

    Introduction Lewy body and Alzheimer-type pathologies often co-exist. Several studies suggest a synergistic relationship between amyloid-β (Aβ) and α-synuclein (α-syn) accumulation. We have explored the relationship between Aβ accumulation and the phosphorylation of α-syn at serine-129 (pSer129 α-syn), in post-mortem human brain tissue and in SH-SY5Y neuroblastoma cells transfected to overexpress human α-syn. Methods We measured levels of Aβ40, Aβ42, α-syn and pSer129 α-syn by sandwich enzyme...

  16. The Physical Oceanography of the Alboran Sea.

    Science.gov (United States)

    1987-03-01

    concentrated in Lanoix, 1974) fluctuated about 38.47 ppt and 13.15’C , ie northern part (Fig. 20). Its path in the eastern basin (in situ ). Bryden et al...inclinacion transversal de las W ater. aguas atlanticas y Mediterraneas en el Estrecho de Gibraltar. Boletin del Instituto Espaiol de X1. References

  17. Source of Aegean Sea harbour porpoises

    DEFF Research Database (Denmark)

    Lockyer, Christina; Rosel, P. E.; Frantzis, A.

    2003-01-01

    Documented sightings of harbour porpoises in the Mediterranean are rare, although the species is common in the neighbouring North Atlantic and Black Sea. However, in the past 2 decades, 4 harbour porpoises Phocoena phocoena have been recorded in the northern Aegean Sea in the eastern Mediterranea...

  18. Compilation of Reprints Number 57,

    Science.gov (United States)

    1981-01-01

    Lam’panyclus jordan: 1. 2. 61, 3. 4. 6 1.3. 6, 7 Lampanyous regalia~ 2 1,3, 4. 6. 16 7 .2. 3 Oiap/sus dieta 2 4 2 . * Cyclothome pallida 23. 4. .6...Thalassiothrix spp. -- T. mediterranea /T, longissima - T. frauen- feldii Further analysis then was based on the resulting 43 taxonomic categories. The matrix of

  19. Reference: 607 [Arabidopsis Phenome Database[Archive

    Lifescience Database Archive (English)

    Full Text Available and function in mitosis. Our analysis of AtSYN3 shows that it localizes primarily in the nucleolus of both m...dopsis cohesin protein SYN3 localizes to the nucleolus and is essential for gamet

  20. Xylariaceae diversity in Thailand and Philippines, based on rDNA sequencing

    Directory of Open Access Journals (Sweden)

    Natarajan Velmurugan

    2013-05-01

    Full Text Available Twenty three different Xylariaceae Tul. & C. Tul were isolatedfrom samples collected from forest zones of Thailand and Philippines.The fungal samples were characterized based on morphological characteristics and nuclear ITS1-5.8S rDNA-ITS2 region sequences. Ten species of Xylaria, two species of Hypoxylon, Biscogniauxia, Rosellinia and one species of Annulohypoxylon and Entonaema were found. Entonaema the distinctive genus of Xylariaceae, isolated in the study from Thailand samples showed a close relationship with Xylaria in phylogenetic tree. Xylariaceous species identified at molecular level showed significant similarity of the morphological characters, such as stromal structure, ascal apex and the germ slit of ascospores. In addition, three species of Arthrinium, two species of Pestalotiopsis were also isolated and characterized in the study. A phylogenetic affinity of Pestalotiopsis with Xylariaceae was found.

  1. Xylariaceae diversity in Thailand and Philippines, based on rDNA sequencing

    Directory of Open Access Journals (Sweden)

    Natarajan Velmurugan

    2013-07-01

    Full Text Available Twenty three different Xylariaceae Tul. & C. Tul were isolated from samples collected from forest zones of Thailand and Philippines. The fungal samples were characterized based on morphological characteristics and nuclear ITS1-5.8S rDNA-ITS2 region sequences. Ten species of Xylaria, two species of Hypoxylon, Biscogniauxia, Rosellinia and one species of Annulohypoxylon and Entonaema were found. Entonaema the distinctive genus of Xylariaceae, isolated in the study from Thailand samples showed a close relationship withXylaria in phylogenetic tree. Xylariaceous species identified at molecular level showed significant similarity of the morphological characters, such as stromal structure, ascal apex and the germ slit of ascospores. In addition, three species of Arthrinium, two species of Pestalotiopsis were also isolated and characterized in the study. A phylogenetic affinity of Pestalotiopsis with Xylariaceae was found.

  2. Bydrage ta de kennis fan it libben, de persoan en it wurk fan Dr. Eeltsje Halbersma 1797-1858

    NARCIS (Netherlands)

    1946-01-01

    It doel fan dizze dissertaesje is yn 'e earste pleats nij materiael to bringen oer Dr. Eeltsje. De wichtichste boarnen foar syn libben en syn wurk binne syn brieven oan Ds, Joast. Oant nou ta wie fan dy brieven mar in lyts bytsje bikend wurden, Dêrneist binne fansels ek de brieven fan Ds. Joast en

  3. The importance of drought-pathogen interactions in driving oak mortality events in the Ozark Border Region

    Science.gov (United States)

    Wood, Jeffrey D.; Knapp, Benjamin O.; Muzika, Rose-Marie; Stambaugh, Michael C.; Gu, Lianhong

    2018-01-01

    Forests are expected to become more vulnerable to drought-induced tree mortality owing to rising temperatures and changing precipitation patterns that amplify drought lethality. There is a crucial knowledge gap regarding drought-pathogen interactions and their effects on tree mortality. The objectives of this research were to examine whether stand dynamics and ‘background’ mortality rates were affected by a severe drought in 2012; and to evaluate the importance of drought-pathogen interactions within the context of a mortality event that killed 10.0% and 26.5% of white (Quercus alba L.) and black (Q. velutina Lam.) oak stems, respectively, in a single year. We synthesized (i) forest inventory data (24 years), (ii) 11 years of ecosystem flux data with supporting biological data including predawn leaf water potential and annual forest inventories, (iii) tree-ring analyses of individual white oaks that were alive and ones that died in 2013, and (iv) documentation of a pathogen infection. This forest displayed stand dynamics consistent with expected patterns of decreasing tree density and increasing basal area. Continued basal area growth outpaced mortality implying a net accumulation of live biomass, which was supported by eddy covariance ecosystem carbon flux observations. Individual white and black oaks that died in 2013 displayed historically lower growth with the majority of dead trees exhibiting Biscogniauxia cankers. Our observations point to the importance of event-based oak mortality and that drought-Biscogniauxia interactions are important in shaping oak stand dynamics in this region. Although forest function has not been significantly impaired, these drought-pathogen interactions could amplify mortality under future climate conditions and thus warrant further investigation.

  4. Import and Export of Misfolded α-Synuclein

    Directory of Open Access Journals (Sweden)

    Lilia Rodriguez

    2018-05-01

    Full Text Available In Parkinson's disease, intracellular α-synuclein (α-syn inclusions form in neurons and are referred to as Lewy bodies. These aggregates spread through the brain following a specific pattern leading to the hypothesis that neuron-to-neuron transfer is critical for the propagation of Lewy body pathology. Here we review recent studies employing pre-formed fibrils generated from recombinant α-syn to evaluate the uptake, trafficking, and release of α-syn fibrils. We outline methods of internalization as well as cell surface receptors that have been described in the literature as regulating α-syn fibril uptake. Pharmacological and genetic studies indicate endocytosis is the primary method of α-syn internalization. Once α-syn fibrils have crossed the plasma membrane they are typically trafficked through the endo-lysosomal system with autophagy acting as the dominant method of α-syn clearance. Interestingly, both chaperone-mediated autophagy and macroautophagy have been implicated in the degradation of α-syn, although it remains unclear which system is chiefly responsible for the removal of α-syn fibrils. The major hallmark of α-syn spreading is the templating of misfolded properties onto healthy protein resulting in a conformational change; we summarize the evidence indicating misfolded α-syn can seed endogenous α-syn to form new aggregates. Finally, recent studies demonstrate that cells release misfolded and aggregated α-syn and that these processes may involve different chaperones. Nonetheless, the exact mechanism for the release of fibrillar α-syn remains unclear. This review highlights what is known, and what requires further clarification, regarding each step of α-syn transmission.

  5. North-Western Palaearctic species of Pristiphora (Hymenoptera, Tenthredinidae

    Directory of Open Access Journals (Sweden)

    Marko Prous

    2017-09-01

    Full Text Available North-Western Palaearctic species of Pristiphora Latreille, 1810 are revised. Altogether, 90 species are treated, two of which are described as new: P. caraganae Vikberg & Prous, sp. n. from Finland and P. dedeara Liston & Prous, sp. n. from Germany. Host plant of P. caraganae is Caragana arborescens Lam. Pristiphora dasiphorae (Zinovjev, 1993 (previously known from East Palaearctic and P. cadma Wong & Ross, 1960 (previously known from North America are recorded for the first time from Europe. Nematus nigricans Eversmann, 1847 [= Pristiphora nigricans (Eversmann, 1847, comb. n.], N. breviusculus Eversmann, 1847 [= Euura melanocephalus (Hartig, 1837], and N. caudalis Eversmann, 1847 [= E. caudalis (Eversmann, 1847, comb. n.] are removed from synonymy with P. pallidiventris (Fallén, 1808, N. paralellus Hartig, 1840 [= P. paralella (Hartig, 1840, comb. n.] is removed from synonymy with P. bufo (Brischke, 1883, and P. mesatlantica Lacourt, 1976 is removed from synonymy with P. insularis Rohwer, 1910. The following 29 new synonymies are proposed: P. nigropuncticeps Haris, 2002, syn. n. with P. albitibia (Costa, 1859; Lygaeonematus karvoneni Lindqvist, 1952, syn. n. with P. alpestris (Konow, 1903; P. (P. anivskiensis Haris, 2006, syn. n. with P. appendiculata (Hartig, 1837; Nematus canaliculatus Hartig, 1840, syn. n with P. carinata (Hartig, 1837; P. nigrogroenblomi Haris, 2002, syn. n. with P. cincta Newman, 1837; Tenthredo flavipes Zetterstedt, 1838, syn. n., Nematus congener W.F. Kirby, 1882, syn. n., and P. thomsoni Lindqvist, 1953, syn. n. with P. dochmocera (Thomson, 1871; P. atrata Lindqvist, 1975, syn. n. with P. friesei (Konow, 1904; P. gelida Wong, 1968, syn. n. with P. frigida (Boheman, 1865; Pachynematus nigricorpus Takagi, 1931, syn. n. with P. laricis (Hartig, 1837; Nematus (Pikonema piceae Zhelochovtsev in Zhelochovtsev and Zinovjev, 1988, syn. n. and P. (P. hoverlaensis Haris, 2001, syn. n. with P. leucopodia (Hartig, 1837; Mesoneura

  6. Fish Synucleins: An Update

    Directory of Open Access Journals (Sweden)

    Mattia Toni

    2015-10-01

    Full Text Available Synucleins (syns are a family of proteins involved in several human neurodegenerative diseases and tumors. Since the first syn discovery in the brain of the electric ray Torpedo californica, members of the same family have been identified in all vertebrates and comparative studies have indicated that syn proteins are evolutionary conserved. No counterparts of syns were found in invertebrates suggesting that they are vertebrate-specific proteins. Molecular studies showed that the number of syn members varies among vertebrates. Three genes encode for α-, β- and γ-syn in mammals and birds. However, a variable number of syn genes and encoded proteins is expressed or predicted in fish depending on the species. Among biologically verified sequences, four syn genes were identified in fugu, encoding for α, β and two γ (γ1 and γ2 isoforms, whereas only three genes are expressed in zebrafish, which lacks α-syn gene. The list of “non verified” sequences is much longer and is often found in sequence databases. In this review we provide an overview of published papers and known syn sequences in agnathans and fish that are likely to impact future studies in this field. Indeed, fish models may play a key role in elucidating some of the molecular mechanisms involved in physiological and pathological functions of syn proteins.

  7. Taxonomic notes on some Polyglyptini: descriptions of new genus and new species (Homoptera, Membracidae, Smiliinae

    Directory of Open Access Journals (Sweden)

    Albino M. Sakakibara

    1996-01-01

    Full Text Available Taxonomic notes on some Polyglyptini; descriptions of new genus and new species (Homoptera, Membracidae, Smiliinae. The genera Hemiptycha Germar, Metheisa Fowler, Maturnaria Metcalf, Aphetea Fowler, Dioclophara Kirkaldy, and Phormophora Stål, are redescribed; Creonus, gen.n. (type species: Maturna lloydi Funkhouser, 1914, and Aphetea robustula, sp.n. (from Bolivia, are described. Some nomenclatural changes are introduced, as follow: - Hemiptycha Germar, 1833 = Polyrhyssa Stål, 1869, syn.n.: - Hemiptycha cultrata (Coquebert, 1801, comb.n., = Polyglyptodes flavocostatus Haviland, 1925, syn.n., = Polyrhyssa cultrata maculata Fonseca, 1942, syn.n. - Hemiptycha obtecta (Fabricius, 1803 = Hille herbicola Haviland, 1925, syn.n. - Maturnaria ephippigera (Fairmaire, 1846 = Publilia tumulata Buckton, 1903, syn.n., = Metheisa fowleri Funkhouser, 1927, syn.n. - Creonus lloydi (Funkhouser, 1914, comb.n. - Aphetea parvula (Fabricius, 1803, comb.n., = Aphetea affinis Haviland, 1925, syn.n. - Dioclophara Kirkaldy, 1904 = lncolea Goding, 1926, syn.n. - Dioclophara viridula (Fairmaire, 1846 = Maturna multilineata Fonseca, 1942, syn.n. - Dioclophara variegata (Goding, 1926, comb.n. = lncolea viridis Goding, 1926, syn.n. - Phormophora maura (Fabricius, 1803 = Darnis dorsata Fabricius, 1803, syn.n.

  8. Alpha-synuclein mutations impair axonal regeneration in models of Parkinson´s disease

    Directory of Open Access Journals (Sweden)

    Lars eTönges

    2014-09-01

    Full Text Available The dopaminergic (DAergic nigrostriatal tract has an intrinsic regenerative capacity which can be impaired in Parkinson’s disease (PD. Alpha-synuclein (aSyn is a major pathogenic component in PD but its impact on DAergic axonal regeneration is largely unknown. In this study, we expressed pathogenic variants of human aSyn by means of recombinant adeno-associated viral vectors in experimental paradigms of DAergic regeneration. In a scratch lesion model in vitro, both aSyn(A30P and aSyn(A53T significantly reduced DAergic neurite regeneration and induced loss of TH-immunopositive cells while aSyn(WT showed only minor cellular neurotoxic effects. The striatal density of TH-immunopositive axons in the striatal 6-OHDA lesion mouse model was attenuated only by aSyn(A30P. However, striatal expression levels of the regeneration marker GAP-43 in TH-immunopositive fibers were reduced by both aSyn(A30P and aSyn(A53T, but not by aSyn(WT which was associated with an activation of the ROCK signaling pathway. Nigral DAergic cell loss was only mildly enhanced by additional overexpression of aSyn variants. Our findings indicate that mutations of aSyn have a strong impact on the regenerative capacity of DAergic neurons, which may contribute to their pathogenic effects.

  9. High-density lipoprotein-like particle formation of Synuclein variants.

    Science.gov (United States)

    Eichmann, Cédric; Kumari, Pratibha; Riek, Roland

    2017-01-01

    α-Synuclein (α-Syn) is an intrinsically disordered protein in solution whose fibrillar aggregates are the hallmark of Parkinson's disease (PD). Although the specific function of α-Syn is still unclear, its high structural plasticity is key for the interactions of α-Syn with biological membranes. Recently, it has been observed that α-Syn is able to form high-density lipoprotein-like (HDL-like) particles that are reminiscent of self-assembling phospholipid bilayer nanodiscs. Here, we extended our preparation method for the production of α-Syn lipoprotein particles to the β- and γ-Syn variants, and the PD-related familial α-Syn mutants. We show that all human Syns can form stable and homogeneous populations of HDL-like particles with distinct morphologies. Our results characterize the impact of the individual Syns on the formation capacity of these particles and indicate that Syn HDL-like particles are neither causing toxicity nor a toxicity-related loss of α-Syn in PD. © 2016 Federation of European Biochemical Societies.

  10. Defined α-synuclein prion-like molecular assemblies spreading in cell culture.

    Science.gov (United States)

    Aulić, Suzana; Le, Tran Thanh Nhat; Moda, Fabio; Abounit, Saïda; Corvaglia, Stefania; Casalis, Loredana; Gustincich, Stefano; Zurzolo, Chiara; Tagliavini, Fabrizio; Legname, Giuseppe

    2014-06-04

    α-Synuclein (α-syn) plays a central role in the pathogenesis of synucleinopathies, a group of neurodegenerative disorders that includes Parkinson disease, dementia with Lewy bodies and multiple system atrophy. Several findings from cell culture and mouse experiments suggest intercellular α-syn transfer. Through a methodology used to obtain synthetic mammalian prions, we tested whether recombinant human α-syn amyloids can promote prion-like accumulation in neuronal cell lines in vitro. A single exposure to amyloid fibrils of human α-syn was sufficient to induce aggregation of endogenous α-syn in human neuroblastoma SH-SY5Y cells. Remarkably, endogenous wild-type α-syn was sufficient for the formation of these aggregates, and overexpression of the protein was not required. Our results provide compelling evidence that endogenous α-syn can accumulate in cell culture after a single exposure to exogenous α-syn short amyloid fibrils. Importantly, using α-syn short amyloid fibrils as seed, endogenous α-syn aggregates and accumulates over several passages in cell culture, providing an excellent tool for potential therapeutic screening of pathogenic α-syn aggregates.

  11. Elimination reactions. V. Steric effects in Hofmann elimination

    International Nuclear Information System (INIS)

    Coke, J.L.; Smith, G.D.; Britton, G.H. Jr.

    1975-01-01

    Earlier Hofmann elimination studies were extended, and the percent syn eliminations in several ring systems have been correlated using cis-d 1 and trans-d 1 models. The measurements of several syn and anti k/sub H//k/sub D/ kinetic isotope effects are reported. Results indicate that Hofmann elimination of N,N,N-trimethyl-3,3-dimethylcyclopentylammonium hydroxide goes by 97 percent syn mechanism to give 3,3-dimethylcyclopentene and by 70 + - 6 percent syn mechanism to give 4,4-dimethylcyclopentene. There appears to be severe steric interactions in the anti mechanism in the 3,3-dimethylcyclopentyl system. Results indicate that, for Hofmann pyrolysis of trimethylammonium hydroxides, cyclopentene is formed by a 39 +- 7 percent syn mechanism, cyclohexene is formed by a 2 + - 2 percent syn mechanism, and cycloheptene is formed by a 30 +- 2 percent syn mechanism. Steric effects on isotope effects and mechanisms are discussed. (U.S.)

  12. The chaperone-like activity of α-synuclein attenuates aggregation of its alternatively spliced isoform, 112-synuclein in vitro: plausible cross-talk between isoforms in protein aggregation.

    Directory of Open Access Journals (Sweden)

    Krishna Madhuri Manda

    Full Text Available Abnormal oligomerization and aggregation of α-synuclein (α-syn/WT-syn has been shown to be a precipitating factor in the pathophysiology of Parkinson's disease (PD. Earlier observations on the induced-alternative splicing of α-syn by Parkinsonism mimetics as well as identification of region specific abnormalities in the transcript levels of 112-synuclein (112-syn in diseased subjects underscores the role of 112-syn in the pathophysiology of PD. In the present study, we sought to identify the aggregation potential of 112-syn in the presence or absence of WT-syn to predict its plausible role in protein aggregation events. Results demonstrate that unlike WT-syn, lack of 28 aa in the C-terminus results in the loss of chaperone-like activity with a concomitant gain in vulnerability to heat-induced aggregation and time-dependent fibrillation. The effects were dose and time-dependent and a significant aggregation of 112-syn was evident at as low as 45 °C following 10 min of incubation. The heat-induced aggregates were found to be ill-defined structures and weakly positive towards Thioflavin-T (ThT staining as compared to clearly distinguishable ThT positive extended fibrils resulting upon 24 h of incubation at 37 °C. Further, the chaperone-like activity of WT-syn significantly attenuated heat-induced aggregation of 112-syn in a dose and time-dependent manner. On contrary, WT-syn synergistically enhanced fibrillation of 112-syn. Overall, the present findings highlight a plausible cross-talk between isoforms of α-syn and the relative abundance of these isoforms may dictate the nature and fate of protein aggregates.

  13. Prevalence of metabolic syndrome and metabolic syndrome components in young adults: A pooled analysis

    Directory of Open Access Journals (Sweden)

    Paul B. Nolan

    2017-09-01

    Full Text Available Metabolic syndrome (MetSyn represents a clustering of different metabolic abnormalities. MetSyn prevalence is present in approximately 25% of all adults with increased prevalence in advanced ages. The presence of one component of MetSyn increases the risk of developing MetSyn later in life and likely represents a high lifetime burden of cardiovascular disease risk. Therefore we pooled data from multiple studies to establish the prevalence of MetSyn and MetSyn component prevalence across a broad range of ethnicities. PubMed, SCOPUS and Medline databases were searched to find papers presenting MetSyn and MetSyn component data for 18–30 year olds who were apparently healthy, free of disease, and MetSyn was assessed using either the harmonized, National Cholesterol Education Program Adult Treatment Panel III (NCEP-ATPIII, American Heart Association/National Heart, Blood and Lung Institute (AHA/NHBLI, or International Diabetes Federation (IDF definitions of MetSyn. After reviewing returned articles, 26,609 participants' data from 34 studies were included in the analysis and the data were pooled. MetSyn was present in 4.8–7% of young adults. Atherogenic dyslipidaemia defined as low high density lipoprotein (HDL cholesterol was the most prevalent MetSyn component (26.9–41.2%, followed by elevated blood pressure (16.6–26.6%, abdominal obesity (6.8–23.6%, atherogenic dyslipidaemia defined as raised triglycerides (8.6–15.6%, and raised fasting glucose (2.8–15.4%. These findings highlight that MetSyn is prevalent in young adults. Establishing the reason why low HDL is the most prevalent component may represent an important step in promoting primary prevention of MetSyn and reducing the incidence of subsequent clinical disease.

  14. House owners' views on investing in district heating - a study of applied sales strategies and the customers choice at conversion from electric heating; Smaahusaegarnas syn paa att koepa fjaerrvaerme - en studie av tillaempade foersaeljningsstrategier och kunders val vid konvertering fraan direktverkande el

    Energy Technology Data Exchange (ETDEWEB)

    Sernhed, Kerstin; Pyrko, Jurek [Div. of Efficient Energy Systems, Dept. of Energy Sciences, Lund University, Lund (Sweden)

    2006-07-15

    This report presents results from the project 'Converting direct resistive electric heating into district heating - customer related aspects'. The main objective of this study was to investigate how specific households within one housing area (Sandsbro in Vaexjoe with 110 one-family houses) experienced the conversion process, in order to understand the reasons behind 'yes' or 'no' responses to the utility's offer. A qualitative approach with semi-structured in-depth interviews with a specially selected sample of households from 10 converted and 13 not converted houses was chosen as the main method. The investigation led to the following conclusions and recommendations: Household reactions to the terms of sale and conversion: Many households felt that the decisions were rushed - there is a need for better planning, especially for the older households. The information provided was evaluated as detailed and sufficient. The 'demonstration villa' was a good idea but the installation should be done more professionally - aesthetics are very important here. Home visits were the only personal contact and should be conducted in all houses in order to answer questions and explain problems. Co-ordination of excavation should be better in order to limit the time the ground is open. A few of the households undertook some of the works themselves to reduce costs but the compensation was often considered as too low to motivate customers. Household opinions on the product and/or service: Almost all households felt that the thermal comfort was better than before - more stable indoor temperature, no problems with overheated radiators or smell of burning dust. On the other hand, hot water comfort was worse - longer waiting time for hot water and too low water temperature during summer. Aesthetics were considered very important and could be crucial for the decision to convert the heating system. Many of the interviewed households were uncertain how to adjust and take care of the system - there is a notable need for information here. Household understanding of the economic terms of the district heating conversion: It was clear that many of the interviewed households did not have a view about the change of energy costs after conversion. It was also difficult for them to make a profitability analysis before the decision. However, the offer was considered to be very favourable in this specific case. It is important that the offer and investment comes at the right time for the households - regardless of the price. One argument raised against district heating conversion was fear of monopoly and high energy costs. All households, even those not converted, were convinced that the investment would be paid back in the future because of an increased property value following conversion. Household reasons to say 'no' to district heating conversion: The household has recently invested in a new heating system or in a secondary system, Negative views about aesthetics of the waterborne system, It's too labour intensive to convert, Wrong facts or misunderstanding. Household reasons to say 'yes' to district heating conversion: Improved thermal comfort, Convenience, Low investment costs, Expectations about lower energy costs, Few alternatives to direct resistive space heating, Better than electricity from an environmental point of view. Statistical analysis proved that variables such as 'age', 'type of household' and 'energy use level' could, to some extent, be related to the decision to convert from electric radiators to district heating.

  15. Streamingtjänster av film och dess framtida utveckling som substitut för illegal nedladdning : Konsumenternas syn på digitala tjänster och de förbättringar som krävs för ett hållbart paradigmskifte

    OpenAIRE

    Nilsson Ranta, Erik; Freskgård, Markus

    2013-01-01

    In this paper we aim to delve deeper into the film industry and how their approach to streaming services such as Netflix might be the solution to the problems with piracy (people downloading illegally instead of paying for the products) - but before they can change the mindset of people, they have to overcome some issues that might make it hard for the film industry to adapt a fully functionable streaming sollution in the veins of Spotify. To come up with some conclusions regarding this matte...

  16. "Målsättningen är en nöjd värmlänning" : Vårdpersonalens syn på tillgänglighet, bemötande och kvalitet i patientmötet

    OpenAIRE

    Nilsson, Emil; Brodin, Roger; Karlsson, Inge

    2009-01-01

    We have made a qualitative study where we have chosen to interview a number of respondents consisting of ophthalmologists, eye nurses and patients. The purpose of the study was to examine employees' perceptions of patient-related status and treatment and quality, and meaningful participation in the work. The conducted interviews, we then sat in relation to how patients experienced the visit to the eye clinic and their perception of accessibility and hospitality. The result is then compared ag...

  17. Evidence of syn tectonic tephrites with nepheline in the Sidi Said Maachou Cambrian basin (coastal Meseta, Morocco); geo dynamic implications; Mise en evidence de tephrites a nepheline syntectoniques dans le bassin cambrien de Sidi Said Maachou (Meseta cotiere, Maroc); signification geodynamique

    Energy Technology Data Exchange (ETDEWEB)

    Remmal, T.; Mohsine, A.; El Hatimi, N.

    2009-07-01

    Based on a combined structural, petrographic, and geochemical analysis, a new interpretation of the basic magmatism of Sidi Said Maachou (coastal Meseta) in two stages of emplacement is proposed. The first stage is characterized by transitional pyroclastic flows that have accompanied the opening of the West-Mesetian basin, during the Cambrian; the second stage is made of dykes of basalts, dolerites, and tephrites bearing nepheline. The emplacement of this undersaturated alkaline magma is associated to a sinistral sub meridian shear zone which has been activated at the end of the Caledonian orogenesis, by a mantellic advection. (Author) 32 refs.

  18. «Hvis de hadde oppført seg som vanlige nordmenn, hadde alt vært greit, tror jeg» — Nordmenns syn på årsaken til negative holdninger til jøder og muslimer

    Directory of Open Access Journals (Sweden)

    Vibeke Moe

    2016-04-01

    Full Text Available This article explores contemporary images of Jews and Muslims in Norway by using qualitative empirical data, namely the answers to an open-ended question that was included in a quantitative survey on attitudes towards Jews and other minorities in Norway, conducted in 2012. The target group for the survey consisted of Norwegian residents aged 18 and above. A total of 1522 people answered the questionnaire. The results of the survey can be considered as representative of the Norwegian population with respect to age, gender, education and geographical distribution. Respondents were asked what they regarded to be the reasons for existing negative attitudes towards Jews and Muslims respectively. This article analyzes whether the perceptions reflected in the respondents’ answers represent stereotypical views and partly include traces of conspiracy beliefs. The article also discusses these perceptions within the broader perspective of Norwegian society, asking in which ways the data reflects ideas of inclusion and exclusion. The analysis exposes differences regarding traditional stereotypes and prejudices against the two minorities and the ways in which these prejudices are linked to (perceived contemporary conflicts and tensions – both within Norwegian society and internationally. Negative attitudes towards Jews are often explained with reference to the role played by Israel in the Middle East conflict, and almost never with specific reference to Norwegian society. The material contains few examples describing Jews as scapegoats for current social problems in Norway. On the contrary, respondents’ answers indicate social distance. Approximately half of the answers claim that negative attitudes towards Jews are due to the Israeli-Palestinian conflict. The images of Jews presented in connection with this conflict are predominantly negative and characterized by topics such as oppression, ruthlessness and power. The analysis shows how these statements serve to reduce complexity by effectively equating “Jews” with “Israelis”. As a consequence Jews seem to be excluded from the notion of the Norwegian national collective. The statements about Muslims show that they are regarded to be citizens and as such part of Norwegian society, but with characteristics perceived as problematic and threatening. Respondents often connected negative attitudes towards Muslims with a “foreign culture”. Many statements describe Muslims as oppressive to women, as harboring undemocratic attitudes or as criminals. The data shows how people develop generalizations, describing something as “typically Muslim” or “typically Jewish”, reflecting current debates and media coverage. Such generalizations derive their strength from placing the speaker in a morally superior position. In the present material these attitudes represent the antithesis of an implicit notion of the Norwegian community as a liberal, egalitarian and peace-loving society. Despite the differences, a clear picture emerges that the characterizations of both Jews and Muslims seem to serve a common function: to provide a contrast to this national self-image. Such polarized notions of “us” and “them”, however, undermine the values generally constructed as “Norwegian”: when “the other” bears problematic features that we do not want to acknowledge in ourselves or our communities, we lose the ability to critically reflect on who we are. While maintaining an idealized notion of “us”, we become increasingly dependent on a rejection and denial of the “other”. 

  19. House owners' views on investing in district heating - a study of applied sales strategies and the customers choice at conversion from electric heating; Smaahusaegarnas syn paa att koepa fjaerrvaerme - en studie av tillaempade foersaeljningsstrategier och kunders val vid konvertering fraan direktverkande el

    Energy Technology Data Exchange (ETDEWEB)

    Sernhed, Kerstin; Pyrko, Jurek [Div. of Efficient Energy Systems, Dept. of Energy Sciences, Lund University, Lund (Sweden)

    2006-07-15

    This report presents results from the project 'Converting direct resistive electric heating into district heating - customer related aspects'. The main objective of this study was to investigate how specific households within one housing area (Sandsbro in Vaexjoe with 110 one-family houses) experienced the conversion process, in order to understand the reasons behind 'yes' or 'no' responses to the utility's offer. A qualitative approach with semi-structured in-depth interviews with a specially selected sample of households from 10 converted and 13 not converted houses was chosen as the main method. The investigation led to the following conclusions and recommendations: Household reactions to the terms of sale and conversion: Many households felt that the decisions were rushed - there is a need for better planning, especially for the older households. The information provided was evaluated as detailed and sufficient. The 'demonstration villa' was a good idea but the installation should be done more professionally - aesthetics are very important here. Home visits were the only personal contact and should be conducted in all houses in order to answer questions and explain problems. Co-ordination of excavation should be better in order to limit the time the ground is open. A few of the households undertook some of the works themselves to reduce costs but the compensation was often considered as too low to motivate customers. Household opinions on the product and/or service: Almost all households felt that the thermal comfort was better than before - more stable indoor temperature, no problems with overheated radiators or smell of burning dust. On the other hand, hot water comfort was worse - longer waiting time for hot water and too low water temperature during summer. Aesthetics were considered very important and could be crucial for the decision to convert the heating system. Many of the interviewed households were uncertain how to adjust and take care of the system - there is a notable need for information here. Household understanding of the economic terms of the district heating conversion: It was clear that many of the interviewed households did not have a view about the change of energy costs after conversion. It was also difficult for them to make a profitability analysis before the decision. However, the offer was considered to be very favourable in this specific case. It is important that the offer and investment comes at the right time for the households - regardless of the price. One argument raised against district heating conversion was fear of monopoly and high energy costs. All households, even those not converted, were convinced that the investment would be paid back in the future because of an increased property value following conversion. Household reasons to say 'no' to district heating conversion: The household has recently invested in a new heating system or in a secondary system, Negative views about aesthetics of the waterborne system, It's too labour intensive to convert, Wrong facts or misunderstanding. Household reasons to say 'yes' to district heating conversion: Improved thermal comfort, Convenience, Low investment costs, Expectations about lower energy costs, Few alternatives to direct resistive space heating, Better than electricity from an environmental point of view. Statistical analysis proved that variables such as 'age', 'type of household' and 'energy use level' could, to some extent, be related to the decision to convert from electric radiators to district heating.

  20. Operators tool to control fibre quality in the production of CTMP/TMP in an energy efficient way. New view shows a potential to reduce energy input; Operatoersverktyg foer styrning av fiberkvalitet vid tillverkning av CTMP/TMP paa ett energieffektivt saett. Ny syn visar paa potential foer energibesparing

    Energy Technology Data Exchange (ETDEWEB)

    Ferritsius, Olof; Johansson, Ola; Ferritsius, Rita

    2011-10-15

    The main objective of the project was to provide operators in the two factories the opportunity to more actively identify causes of variations in energy efficiency in the production of TMP and CTMP. To achieve this, it was done in collaboration with the Umeaa Inst. of Design at Umeaa Univ., new types of operator interfaces that clearly demonstrate when changes are about to occur in the process variables respectively quality variables. In addition, a method was developed to calculate the energy efficiency on-line with regard to quality.

  1. ”Ja, det är ju de det handlar om, det är ju kommunikation, annars kan man ju låta bli.” : -en studie om kulturhistoriska museers syn på kommunikation i utställningssituationer

    OpenAIRE

    Eklund, Emma

    2008-01-01

    Purpose/Aim: Exhibitions in cultural-historical museums have traditionally been object-centered and associated with one-way communication. The aim of this thesis is to gain knowledge about how exhibition producers – and educationalists at swedish cultural-historical museums today relate to communication in exhibitions from a communication scientific perspective. Material/Method: The method of the thesis is interviews exhibition producers – and educationalists at five swedish cultural-historic...

  2. Vejdu do pokoje svých synů a ptám se šeptem "Spíš?": K možnostem výzkumu šeptání v běžné komunikaci

    Czech Academy of Sciences Publication Activity Database

    Jílková, Lucie

    2015-01-01

    Roč. 76, č. 1 (2015), s. 39-58 ISSN 0037-7031 R&D Projects: GA ČR GAP406/12/1829 Institutional support: RVO:68378092 Keywords : whispering * communicative aim * systematic self-observation Subject RIV: AI - Linguistics Impact factor: 0.679, year: 2015

  3. α-Synuclein may cross-bridge v-SNARE and acidic phospholipids to facilitate SNARE-dependent vesicle docking.

    Science.gov (United States)

    Lou, Xiaochu; Kim, Jaewook; Hawk, Brenden J; Shin, Yeon-Kyun

    2017-06-06

    Misfolded α-synuclein (A-syn) is widely recognized as the primal cause of neurodegenerative diseases including Parkinson's disease and dementia with Lewy bodies. The normal cellular function of A-syn has, however, been elusive. There is evidence that A-syn plays multiple roles in the exocytotic pathway in the neuron, but the underlying molecular mechanisms are unclear. A-syn has been known to interact with negatively charged phospholipids and with vesicle SNARE protein VAMP2. Using single-vesicle docking/fusion assays, we find that A-syn promotes SNARE-dependent vesicles docking significantly at 2.5 µM. When phosphatidylserine (PS) is removed from t-SNARE-bearing vesicles, the docking enhancement by A-syn disappears and A-syn instead acts as an inhibitor for docking. In contrast, subtraction of PS from the v-SNARE-carrying vesicles enhances vesicle docking even further. Moreover, when we truncate the C-terminal 45 residues of A-syn that participates in interacting with VAMP2, the promotion of vesicle docking is abrogated. Thus, the results suggest that the A-syn's interaction with v-SNARE through its C-terminal tail and its concurrent interaction with PS in trans through its amphipathic N-terminal domain facilitate SNARE complex formation, whereby A-syn aids SNARE-dependent vesicle docking. © 2017 The Author(s); published by Portland Press Limited on behalf of the Biochemical Society.

  4. In parkinsonian substantia nigra, alpha-synuclein is modified by acrolein, a lipid-peroxidation product, and accumulates in the dopamine neurons with inhibition of proteasome activity.

    Science.gov (United States)

    Shamoto-Nagai, M; Maruyama, W; Hashizume, Y; Yoshida, M; Osawa, T; Riederer, P; Naoi, M

    2007-01-01

    alpha-Synuclein (alphaSYN) plays a central role in the neural degeneration of Parkinson's disease (PD) through its conformational change. In PD, alphaSYN, released from the membrane, accumulates in the cytoplasm and forms Lewy body. However, the mechanism behind the translocation and conformational change of alphaSYN leading to the cell death has not been well elucidated. This paper reports that in the dopamine neurons of the substantia nigra containing neuromelanin from PD patients, alphaSYN was modified with acrolein (ACR), an aldehyde product of lipid peroxidation. Histopathological observation confirmed the co-localization of protein immunoreactive to anti-alphaSYN and ACR antibody. By Western blot analyses of samples precipitated with either anti-alphaSYN or anti-ACR antibody, increase in ACR-modified alphaSYN was confirmed in PD brain. Modification of recombinant alphaSYN by ACR enhanced its oligomerization, and at higher ACR concentrations alphaSYN was fragmented and polymerized forming a smear pattern in SDS-PAGE. ACR reduced 20S proteasome activity through the direct modification of the proteasome proteins and the production of polymerized ACR-modified proteins, which inhibited proteasome activity in vitro. These results suggest that ACR may initiate vicious cycle of modification and aggregation of proteins, including alphaSYN, and impaired proteolysis system, to cause neuronal death in PD.

  5. Cellular response of human neuroblastoma cells to α-synuclein fibrils, the main constituent of Lewy bodies.

    Science.gov (United States)

    Pieri, Laura; Chafey, Philippe; Le Gall, Morgane; Clary, Guilhem; Melki, Ronald; Redeker, Virginie

    2016-01-01

    α-Synuclein (α-Syn) fibrils are the main constituent of Lewy bodies and a neuropathological hallmark of Parkinson's disease (PD). The propagation of α-Syn assemblies from cell to cell suggests that they are involved in PD progression. We previously showed that α-Syn fibrils are toxic because of their ability to bind and permeabilize cell membranes. Here, we document the cellular response in terms of proteome changes of SH-SY5Y cells exposed to exogenous α-Syn fibrils. We compare the proteomes of cells of neuronal origin exposed or not either to oligomeric or fibrillar α-Syn using two dimensional differential in-gel electrophoresis (2D-DIGE) and mass spectrometry. Only α-Syn fibrils induce significant changes in the proteome of SH-SY5Y cells. In addition to proteins associated to apoptosis and toxicity, or proteins previously linked to neurodegenerative diseases, we report an overexpression of proteins involved in intracellular vesicle trafficking. We also report a remarkable increase in fibrillar α-Syn heterogeneity, mainly due to C-terminal truncations. Our results show that cells of neuronal origin adapt their proteome to exogenous α-Syn fibrils and actively modify those assemblies. Cells of neuronal origin adapt their proteome to exogenous toxic α-Syn fibrils and actively modify those assemblies. Our results bring insights into the cellular response and clearance events the cells implement to face the propagation of α-Syn assemblies associated to pathology.

  6. A Focus on the Beneficial Effects of Alpha Synuclein and a Re-Appraisal of Synucleinopathies.

    Science.gov (United States)

    Ryskalin, Larisa; Busceti, Carla L; Limanaqi, Fiona; Biagioni, Francesca; Gambardella, Stefano; Fornai, Francesco

    2018-01-01

    Alpha synuclein (α-syn) belongs to a class of proteins which are commonly considered to play a detrimental role in neuronal survival. This assumption is based on the occurrence of a severe neuronal degeneration in patients carrying a multiplication of the α-syn gene (SNCA) and in a variety of experimental models, where overexpression of α-syn leads to cell death and neurological impairment. In these conditions, a higher amount of normally structured α-syn produces a damage, which is even worse compared with that produced by α-syn owning an abnormal structure (as occurring following point gene mutations). In line with this, knocking out the expression of α-syn is reported to protect from specific neurotoxins such as 1-methyl, 4-phenyl 1,2,3,6-tetrahydropyridine (MPTP). In the present review we briefly discuss these well-known detrimental effects but we focus on findings showing that, in specific conditions α-syn is beneficial for cell survival. This occurs during methamphetamine intoxication which is counteracted by endogenous α-syn. Similarly, the dysfunction of the chaperone cysteine-string protein- alpha leads to cell pathology which is counteracted by over-expressing α-syn. In line with this, an increased expression of α-syn protects against oxidative damage produced by dopamine. Remarkably, when the lack of α-syn is combined with a depletion of β- and γ- synucleins, alterations in brain structure and function occur. This review tries to balance the evidence showing a beneficial effect with the bulk of data reporting a detrimental effect of endogenous α-syn. The specific role of α-syn as a chaperone protein is discussed to explain such a dual effect. Copyright© Bentham Science Publishers; For any queries, please email at epub@benthamscience.org.

  7. Revision of the fungus-farming ant genus Sericomyrmex Mayr (Hymenoptera, Formicidae, Myrmicinae

    Directory of Open Access Journals (Sweden)

    Ana Ješovnik

    2017-04-01

    Full Text Available The genus Sericomyrmex Mayr (Formicidae: Myrmicinae: Attini is a Neotropical group of fungus-farming ants known for its problematic taxonomy, caused by low morphological variability across the species, vague and old species descriptions, and an outdated and incomplete key published in 1916. Recent molecular studies revealed that Sericomyrmex is the product of a rapid recent radiation, with a divergence date of 4.3 million years ago. Here we present a comprehensive taxonomic revision of the genus Sericomyrmex based on morphology and a recently published molecular phylogeny. We discuss and illustrate morphological characters for Sericomyrmex workers, males, queens, and larvae. We report 18 standard morphological measurements and 5 indices for 529 workers, 50 queens, and 39 males, which we employ in morphometric analyses. The revised genus Sericomyrmex comprises eleven species, including three new species, here described as S. maravalhas sp. n., S. radioheadi sp. n., and S. saramama sp. n. We also redescribe S. amabilis Wheeler, S. bondari Borgmeier, S. lutzi Wheeler, S. mayri Forel, S. opacus Mayr, S. parvulus Forel, S. saussurei Emery, and S. scrobifer Forel. The number of recognized species (11 is lower than the previously recognized 19 species and 3 subspecies. The following species and subspecies are synonymized: under S. opacus [=S. aztecus Forel syn. n., S. zacapanus Wheeler syn. n., and S. diego Forel syn. n.]; under S. bondari [=S. beniensis Weber syn. n.]; under S. mayri [=S. luederwaldti Santschi syn. n., S. moreirai Santschi syn. n., S. harekulli Weber syn. n., S. harekulli arawakensis Weber syn. n., S. urichi Forel syn. n.]; under S. saussurei [=S. burchelli Forel syn. n., S. impexus Wheeler syn. n., S. urichi maracas Weber syn. n.]; and under S. parvulus [=S. myersi Weber syn. n.]. We provide a key to Sericomyrmex species for the worker caste and information on the geographic distributions of all species.

  8. A Protein Aggregation Inhibitor, Leuco-Methylthioninium Bis(Hydromethanesulfonate, Decreases α-Synuclein Inclusions in a Transgenic Mouse Model of Synucleinopathy

    Directory of Open Access Journals (Sweden)

    Karima Schwab

    2018-01-01

    Full Text Available α-Synuclein (α-Syn aggregation is a pathological feature of synucleinopathies, neurodegenerative disorders that include Parkinson’s disease (PD. We have tested whether N,N,N′,N′-tetramethyl-10H-phenothiazine-3,7-diaminium bis(hydromethanesulfonate (leuco-methylthioninium bis(hydromethanesulfonate; LMTM, a tau aggregation inhibitor, affects α-Syn aggregation in vitro and in vivo. Both cellular and transgenic models in which the expression of full-length human α-Syn (h-α-Syn fused with a signal sequence peptide to promote α-Syn aggregation were used. Aggregated α-Syn was observed following differentiation of N1E-115 neuroblastoma cells transfected with h-α-Syn. The appearance of aggregated α-Syn was inhibited by LMTM, with an EC50 of 1.1 μM, with minimal effect on h-α-Syn mRNA levels being observed. Two independent lines of mice (L58 and L62 transgenic for the same fusion protein accumulated neuronal h-α-Syn that, with aging, developed into fibrillary inclusions characterized by both resistance to proteinase K (PK-cleavage and their ability to bind thiazin red. There was a significant decrease in α-Syn-positive neurons in multiple brain regions following oral treatment of male and female mice with LMTM administered daily for 6 weeks at 5 and 15 mg MT/kg. The early aggregates of α-Syn and the late-stage fibrillar inclusions were both susceptible to inhibition by LMTM, a treatment that also resulted in the rescue of movement and anxiety-related traits in these mice. The results suggest that LMTM may provide a potential disease modification therapy in PD and other synucleinopathies through the inhibition of α-Syn aggregation.

  9. Preparation and Characterization of Stable α-Synuclein Lipoprotein Particles.

    Science.gov (United States)

    Eichmann, Cédric; Campioni, Silvia; Kowal, Julia; Maslennikov, Innokentiy; Gerez, Juan; Liu, Xiaoxia; Verasdonck, Joeri; Nespovitaya, Nadezhda; Choe, Senyon; Meier, Beat H; Picotti, Paola; Rizo, Josep; Stahlberg, Henning; Riek, Roland

    2016-04-15

    Multiple neurodegenerative diseases are caused by the aggregation of the human α-Synuclein (α-Syn) protein. α-Syn possesses high structural plasticity and the capability of interacting with membranes. Both features are not only essential for its physiological function but also play a role in the aggregation process. Recently it has been proposed that α-Syn is able to form lipid-protein particles reminiscent of high-density lipoproteins. Here, we present a method to obtain a stable and homogeneous population of nanometer-sized particles composed of α-Syn and anionic phospholipids. These particles are called α-Syn lipoprotein (nano)particles to indicate their relationship to high-density lipoproteins formed by human apolipoproteins in vivo and of in vitro self-assembling phospholipid bilayer nanodiscs. Structural investigations of the α-Syn lipoprotein particles by circular dichroism (CD) and magic angle solid-state nuclear magnetic resonance (MAS SS-NMR) spectroscopy establish that α-Syn adopts a helical secondary structure within these particles. Based on cryo-electron microscopy (cryo-EM) and dynamic light scattering (DLS) α-Syn lipoprotein particles have a defined size with a diameter of ∼23 nm. Chemical cross-linking in combination with solution-state NMR and multiangle static light scattering (MALS) of α-Syn particles reveal a high-order protein-lipid entity composed of ∼8-10 α-Syn molecules. The close resemblance in size between cross-linked in vitro-derived α-Syn lipoprotein particles and a cross-linked species of endogenous α-Syn from SH-SY5Y human neuroblastoma cells indicates a potential functional relevance of α-Syn lipoprotein nanoparticles. © 2016 by The American Society for Biochemistry and Molecular Biology, Inc.

  10. Regeneració i homeòstasi a les planàries: gens i vies de senyalització implicats en l'organogènesi

    OpenAIRE

    González Sastre, Alejandro

    2017-01-01

    [cat] En aquesta tesi, titulada “Regeneració i homeòstasi a les planàries: gens i vies de senyalització implicats en l'organogènesi”, s’aprofundeix en l’estudi dels processos responsables de l’organogènesi a la planària d’aigua dolça Schmidtea mediterranea, tant durant la regeneració com durant l’homeòstasi. La planària d’aigua dolça Schmidtea mediterranea presenta una extraordinària capacitat de regeneració, gràcies a la presència d’una elevada quantitat de cèl·lules mare, els neoblasts, qu...

  11. Estudio de la comunidad de Cystoseira mediterránea en dos localidades de la península del cabo de Creus (Alt Empardà, Nordeste de España

    Directory of Open Access Journals (Sweden)

    Rull Lluch, Jordi

    1990-05-01

    Full Text Available A survey has been carried out of the Cystoseira mediterranea community from eight samples seasonally collected in two localities of the cape Creus peninsula (N. E. Spain .
    The results obtained are related to the environmental conditions and they are compared with those obtained by other authors.

    Se ha realizado un estudio de la comunidad de Cystoseira mediterranea a partir de ocho muestras recolectadas estacionalmente en dos localidades de la península del cabo de Creus (nordeste de España. Los resultados obtenidos se comentan en relación con las condiciones ambientales y se comparan con los obtenidos por otros autores.

  12. I Giochi del Mediterraneo. Uno strumento per una possibile integrazione sociale e culturale?

    Directory of Open Access Journals (Sweden)

    Gian Luigi Corinto

    2015-11-01

    Full Text Available Uno spazio geopolitico importante per le relazioni estere dell'Italia è senza dubbio ilMediterraneo (de Leonardis 2003, anche se la contrapposizione tra vocazioneeuropea e mediterranea, europeismo e mediterraneismo, è una costante della politicaestera italiana (Varsori 2003. Tale situazione duale deriva non soltanto dalla posizionegeografica ma anche dal fatto che l'area mediterranea è stata instabile e carica ditensione fino al secondo dopoguerra e lo è rimasta dalla fine del mondo bipolare(Colombo 2003. Il Sud si è trasformato nel luogo principe di improbabili e imminentisfide alla sicurezza del dopo Guerra fredda, così come di instabilità politica e di conflittilocali causati da movimenti estremisti sorti nei paesi delle sponde orientale emeridionale (Pizzigallo 2010. Il Mediterraneo è anche una sorta di zona franca, un antimondoche gioca ruoli complessi e spesso deregolati nel contesto globale (Farinelli2007.Uno spazio geopolitico importante per le relazioni estere dell'Italia è senza dubbio ilMediterraneo (de Leonardis 2003, anche se la contrapposizione tra vocazioneeuropea e mediterranea, europeismo e mediterraneismo, è una costante della politicaestera italiana (Varsori 2003. Tale situazione duale deriva non soltanto dalla posizionegeografica ma anche dal fatto che l'area mediterranea è stata instabile e carica ditensione fino al secondo dopoguerra e lo è rimasta dalla fine del mondo bipolare(Colombo 2003. Il Sud si è trasformato nel luogo principe di improbabili e imminentisfide alla sicurezza del dopo Guerra fredda, così come di instabilità politica e di conflittilocali causati da movimenti estremisti sorti nei paesi delle sponde orientale emeridionale (Pizzigallo 2010. Il Mediterraneo è anche una sorta di zona franca, un antimondoche gioca ruoli complessi e spesso deregolati nel contesto globale (Farinelli2007.

  13. A sampling strategy and methodology for assessment and monitoring of Mediterranean small-scale fisheries

    OpenAIRE

    Farrugio, Henri; Le Corre, Gildas

    1993-01-01

    Para realizar una evaluacion cuantitativa de las pesquerias mediterraneas de artes menores, uno de los mayores problemas es la estimacion espacio-temporal de los esfuerzos de pesca y rendimientos de cada componente elemental de las pesquerias y de las variacions correspondientes. Estos elementos son esenciales para la evaluacion de las producciones y de los esfuerzos globales que presentan un interes primordial para el estudio de la dinamica de las pesquerias y de los recursos explotados. Est...

  14. La Pubblica Amministrazione in uno scenario che cambia

    Directory of Open Access Journals (Sweden)

    Renzo Carlucci

    2009-03-01

    Full Text Available Questo numero, mirato alle implicazioni dell'utilizzo del dato territoriale nel contesto delle PA, le Pubbliche Amministrazioni, si arricchisce di un contenuto ulteriore, particolarmente spaziale; GEOmedia esce infatti in coincidenza con una manifestazione che possiamo considerare la vetrina mediterranea privilegiata per la promozione culturale, scientifica e commerciale delle istituzioni e del segmento dell’industria aerospaziale europea ed italiana.

  15. Discrimination of Four Marine Biofilm-Forming Bacteria by LC-MS Metabolomics and Influence of Culture Parameters.

    Science.gov (United States)

    Favre, Laurie; Ortalo-Magné, Annick; Greff, Stéphane; Pérez, Thierry; Thomas, Olivier P; Martin, Jean-Charles; Culioli, Gérald

    2017-05-05

    Most marine bacteria can form biofilms, and they are the main components of biofilms observed on marine surfaces. Biofilms constitute a widespread life strategy, as growing in such structures offers many important biological benefits. The molecular compounds expressed in biofilms and, more generally, the metabolomes of marine bacteria remain poorly studied. In this context, a nontargeted LC-MS metabolomics approach of marine biofilm-forming bacterial strains was developed. Four marine bacteria, Persicivirga (Nonlabens) mediterranea TC4 and TC7, Pseudoalteromonas lipolytica TC8, and Shewanella sp. TC11, were used as model organisms. The main objective was to search for some strain-specific bacterial metabolites and to determine how culture parameters (culture medium, growth phase, and mode of culture) may affect the cellular metabolism of each strain and thus the global interstrain metabolic discrimination. LC-MS profiling and statistical partial least-squares discriminant analyses showed that the four strains could be differentiated at the species level whatever the medium, the growth phase, or the mode of culture (planktonic vs biofilm). A MS/MS molecular network was subsequently built and allowed the identification of putative bacterial biomarkers. TC8 was discriminated by a series of ornithine lipids, while the P. mediterranea strains produced hydroxylated ornithine and glycine lipids. Among the P. mediterranea strains, TC7 extracts were distinguished by the occurrence of diamine derivatives, such as putrescine amides.

  16. Synthetic biology: a utilitarian perspective.

    Science.gov (United States)

    Smith, Kevin

    2013-10-01

    I examine the positive and negative features of synthetic biology ('SynBio') from a utilitarian ethical perspective. The potential beneficial outcomes from SynBio in the context of medicine are substantial; however it is not presently possible to predict precise outcomes due to the nascent state of the field. Potential negative outcomes from SynBio also exist, including iatrogenesis and bioterrorism; however it is not yet possible to quantify these risks. I argue that the application of a 'precautionary' approach to SynBio is ethically fraught, as is the notion that SynBio-associated knowledge ought to be restricted. I conclude that utilitarians ought to support a broadly laissez-faire stance in respect of SynBio. © 2013 John Wiley & Sons Ltd.

  17. Impaired c-Fos and polo-like kinase 2 induction in the limbic system of fear-conditioned α-synuclein transgenic mice.

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    Heinrich Schell

    Full Text Available α-Synuclein (αSYN is genetically and neuropathologically linked to a spectrum of neurodegenerative diseases including Parkinson's disease, dementia with Lewy bodies, and related disorders. Cognitive impairment is recapitulated in several αSYN transgenic mouse lines. However, the mechanisms of dysfunction in affected neurons are largely unknown. Here we measured neuronal activity induced gene products in the limbic system of αSYN transgenic mice upon fear conditioning (FC. Induction of the synaptic plasticity marker c-Fos was significantly reduced in the amygdala and hippocampus of (Thy1-h[A30P]αSYN transgenic mice in an age-dependent manner. Similarly, the neuronal activity inducible polo-like kinase 2 (Plk2 that can phosphorylate αSYN at the pathological site serine-129 was up-regulated in both brain regions upon FC. Plk2 inductions were also significantly impaired in aged (Thy1-h[A30P]αSYN transgenic mice, both in the amygdala and hippocampus. Plk2 inductions in the amygdala after FC were paralleled by a small but significant increase in the number of neuronal cell bodies immunopositive for serine-129 phosphorylated αSYN in young but not aged (Thy1-h[A30P]αSYN transgenic mice. In addition, we observed in the aged hippocampus a distinct type of apparently unmodified transgenic αSYN profiles resembling synaptic accumulations of αSYN. Thus, the cognitive decline observed in aged αSYN transgenic mice might be due to impairment of neurotransmission and synaptic plasticity in the limbic system by distinct αSYN species.

  18. Pathological role of lipid interaction with α-synuclein in Parkinson's disease.

    Science.gov (United States)

    Suzuki, Mari; Sango, Kazunori; Wada, Keiji; Nagai, Yoshitaka

    2018-01-03

    Alpha-synuclein (αSyn) plays a central role in the pathogenesis of Parkinson's disease (PD) and dementia with Lewy bodies (DLB). In sporadic PD and DLB, normally harmless αSyn proteins without any mutations might gain toxic functions by unknown mechanisms. Thus, it is important to elucidate the factors promoting the toxic conversion of αSyn, towards understanding the pathogenesis of and developing disease-modifying therapies for PD and DLB. Accumulating biophysical and biochemical studies have demonstrated that αSyn interacts with lipid membrane, and the interaction influences αSyn oligomerization and aggregation. Furthermore, genetic and clinicopathological studies have revealed mutations in the glucocerebrosidase 1 (GBA1) gene, which encodes a degrading enzyme for the glycolipid glucosylceramide (GlcCer), as strong risk factors for PD and DLB, and we recently demonstrated that GlcCer promotes toxic conversion of αSyn. Moreover, pathological studies have shown the existence of αSyn pathology in lysosomal storage disorders (LSDs) patient' brain, in which glycosphingolipids (GSLs) is found to be accumulated. In this review, we focus on the lipids as a key factor for inducing wild-type (WT) αSyn toxic conversion, we summarize the knowledge about the interaction between αSyn and lipid membrane, and propose our hypothesis that aberrantly accumulated GSLs might contribute to the toxic conversion of αSyn. Identifying the trigger for toxic conversion of αSyn would open a new therapeutic road to attenuate or prevent crucial events leading to the formation of toxic αSyn. Copyright © 2018 The Authors. Published by Elsevier Ltd.. All rights reserved.

  19. α-Synuclein Immunotherapy Blocks Uptake and Templated Propagation of Misfolded α-Synuclein and Neurodegeneration

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    Hien T. Tran

    2014-06-01

    Full Text Available Accumulation of misfolded alpha-synuclein (α-syn into Lewy bodies (LBs and Lewy neurites (LNs is a major hallmark of Parkinson’s disease (PD and dementia with LBs (DLB. Recent studies showed that synthetic preformed fibrils (pffs recruit endogenous α-syn and induce LB/LN pathology in vitro and in vivo, thereby implicating propagation and cell-to-cell transmission of pathological α-syn as mechanisms for the progressive spread of LBs/LNs. Here, we demonstrate that α-syn monoclonal antibodies (mAbs reduce α-syn pff-induced LB/LN formation and rescue synapse/neuron loss in primary neuronal cultures by preventing both pff uptake and subsequent cell-to-cell transmission of pathology. Moreover, intraperitoneal (i.p. administration of mAb specific for misfolded α-syn into nontransgenic mice injected intrastriatally with α-syn pffs reduces LB/LN pathology, ameliorates substantia nigra dopaminergic neuron loss, and improves motor impairments. We conclude that α-syn antibodies could exert therapeutic effects in PD/DLB by blocking entry of pathological α-syn and/or its propagation in neurons.

  20. Reducing C-terminal-truncated alpha-synuclein by immunotherapy attenuates neurodegeneration and propagation in Parkinson's disease-like models.

    Science.gov (United States)

    Games, Dora; Valera, Elvira; Spencer, Brian; Rockenstein, Edward; Mante, Michael; Adame, Anthony; Patrick, Christina; Ubhi, Kiren; Nuber, Silke; Sacayon, Patricia; Zago, Wagner; Seubert, Peter; Barbour, Robin; Schenk, Dale; Masliah, Eliezer

    2014-07-09

    Parkinson's disease (PD) and dementia with Lewy bodies (DLB) are common neurodegenerative disorders of the aging population, characterized by progressive and abnormal accumulation of α-synuclein (α-syn). Recent studies have shown that C-terminus (CT) truncation and propagation of α-syn play a role in the pathogenesis of PD/DLB. Therefore, we explored the effect of passive immunization against the CT of α-syn in the mThy1-α-syn transgenic (tg) mouse model, which resembles the striato-nigral and motor deficits of PD. Mice were immunized with the new monoclonal antibodies 1H7, 5C1, or 5D12, all directed against the CT of α-syn. CT α-syn antibodies attenuated synaptic and axonal pathology, reduced the accumulation of CT-truncated α-syn (CT-α-syn) in axons, rescued the loss of tyrosine hydroxylase fibers in striatum, and improved motor and memory deficits. Among them, 1H7 and 5C1 were most effective at decreasing levels of CT-α-syn and higher-molecular-weight aggregates. Furthermore, in vitro studies showed that preincubation of recombinant α-syn with 1H7 and 5C1 prevented CT cleavage of α-syn. In a cell-based system, CT antibodies reduced cell-to-cell propagation of full-length α-syn, but not of the CT-α-syn that lacked the 118-126 aa recognition site needed for antibody binding. Furthermore, the results obtained after lentiviral expression of α-syn suggest that antibodies might be blocking the extracellular truncation of α-syn by calpain-1. Together, these results demonstrate that antibodies against the CT of α-syn reduce levels of CT-truncated fragments of the protein and its propagation, thus ameliorating PD-like pathology and improving behavioral and motor functions in a mouse model of this disease. Copyright © 2014 the authors 0270-6474/14/349441-14$15.00/0.

  1. Inducible alpha-synuclein expression affects human Neural Stem Cell behavior.

    Science.gov (United States)

    Zasso, Jacopo; Mastad, Ahmed; Cutarelli, Alessandro; Conti, Luciano

    2018-04-19

    Converging evidence suggest that levels of alpha-Synuclein (aSyn) expression play a critical role in Parkinson's disease (PD). Several mutations of the SNCA gene, encoding for aSyn have been associated to either the familial or the sporadic forms of PD. Nonetheless, the mechanism underlying wild type aSyn-mediated neurotoxicity in neuronal cells as well as its specific driving role in PD pathogenesis has yet to be fully clarified. In this view, the development of proper in vitro cellular systems is a crucial step. Here we present a novel human Tet-on hNSC cell line, in which aSyn timing and level of expression can be tightly experimentally tuned. Induction of aSyn in self-renewing hNSCs leads to progressive formation of aSyn aggregates and impairs their proliferation and cell survival. Furthermore, aSyn induction during the neuronal differentiation process results in reduced neuronal differentiation and increased number astrocytes and undifferentiated cells in culture. Finally, acute aSyn induction in hNSC-derived dopaminergic neuronal cultures results in cell toxicity. This novel conditional in vitro cell model system may be a valuable tool for dissecting of aSyn pathogenic effects in hNSCs and neurons and in developing new potential therapeutic strategies.

  2. Synthetic Promoters and Transcription Factors for Heterologous Protein Expression in Saccharomyces cerevisiae

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    Fabian Machens

    2017-10-01

    Full Text Available Orthogonal systems for heterologous protein expression as well as for the engineering of synthetic gene regulatory circuits in hosts like Saccharomyces cerevisiae depend on synthetic transcription factors (synTFs and corresponding cis-regulatory binding sites. We have constructed and characterized a set of synTFs based on either transcription activator-like effectors or CRISPR/Cas9, and corresponding small synthetic promoters (synPs with minimal sequence identity to the host’s endogenous promoters. The resulting collection of functional synTF/synP pairs confers very low background expression under uninduced conditions, while expression output upon induction of the various synTFs covers a wide range and reaches induction factors of up to 400. The broad spectrum of expression strengths that is achieved will be useful for various experimental setups, e.g., the transcriptional balancing of expression levels within heterologous pathways or the construction of artificial regulatory networks. Furthermore, our analyses reveal simple rules that enable the tuning of synTF expression output, thereby allowing easy modification of a given synTF/synP pair. This will make it easier for researchers to construct tailored transcriptional control systems.

  3. Redescriptions of two species of Lepeophtheirus (Copepoda, Siphonostomatoida, Caligidae parasitic on teleost marine fishes from the coastal zone of the State of Rio de Janeiro, Brazil

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    José Luis Luque

    2000-12-01

    Full Text Available Two species of Lepeophtheirus Nordmann, 1832 parasitic on the ariid fish Netuma barba Lacépède, 1803, and the bothiid fish Paralichthys sp. from the coastal zone of the State of Rio de Janeiro, are redescribed and illustrated: L. bagri Dana, 1852, and L. monacanthus Heller, 1865. New junior synonyms for these species are proposed: L. marginatus syn.n., L. christianensis syn.n. and L. platensis syn.n. of L. bagri and L. unispinosus syn.n. of L. monacanthus.

  4. α-Synuclein transfer between neurons and astrocytes indicates that astrocytes play a role in degradation rather than in spreading.

    Science.gov (United States)

    Loria, Frida; Vargas, Jessica Y; Bousset, Luc; Syan, Sylvie; Salles, Audrey; Melki, Ronald; Zurzolo, Chiara

    2017-11-01

    Recent evidence suggests that disease progression in Parkinson's disease (PD) could occur by the spreading of α-synuclein (α-syn) aggregates between neurons. Here we studied the role of astrocytes in the intercellular transfer and fate of α-syn fibrils, using in vitro and ex vivo models. α-Syn fibrils can be transferred to neighboring cells; however, the transfer efficiency changes depending on the cell types. We found that α-syn is efficiently transferred from astrocytes to astrocytes and from neurons to astrocytes, but less efficiently from astrocytes to neurons. Interestingly, α-syn puncta are mainly found inside the lysosomal compartments of the recipient cells. However, differently from neurons, astrocytes are able to efficiently degrade fibrillar α-syn, suggesting an active role for these cells in clearing α-syn deposits. Astrocytes co-cultured with organotypic brain slices are able to take up α-syn fibrils from the slices. Altogether our data support a role for astrocytes in trapping and clearing α-syn pathological deposits in PD.

  5. Structural and functional properties of prefibrillar α-synuclein oligomers.

    Science.gov (United States)

    Pieri, Laura; Madiona, Karine; Melki, Ronald

    2016-04-14

    The deposition of fibrillar alpha-synuclein (α-syn) within inclusions (Lewy bodies and Lewy neurites) in neurons and glial cells is a hallmark of synucleinopathies. α-syn populates a variety of assemblies ranging from prefibrillar oligomeric species to fibrils whose specific contribution to neurodegeneration is still unclear. Here, we compare the specific structural and biological properties of distinct soluble prefibrillar α-syn oligomers formed either spontaneously or in the presence of dopamine and glutaraldehyde. We show that both on-fibrillar assembly pathway and distinct dopamine-mediated and glutaraldehyde-cross-linked α-syn oligomers are only slightly effective in perturbing cell membrane integrity and inducing cytotoxicity, while mature fibrils exhibit the highest toxicity. In contrast to low-molecular weight and unstable oligomers, large stable α-syn oligomers seed the aggregation of soluble α-syn within reporter cells although to a lesser extent than mature α-syn fibrils. These oligomers appear elongated in shape. Our findings suggest that α-syn oligomers represent a continuum of species ranging from unstable low molecular weight particles to mature fibrils via stable elongated oligomers composed of more than 15 α-syn monomers that possess seeding capacity.

  6. Efficient Design and Optimization of a Flow Control System for Supersonic Mixed Compression Inlets, Phase II

    Data.gov (United States)

    National Aeronautics and Space Administration — SynGenics Corporation proposes a program that unites mathematical and statistical processes, Response Surface Methodology, and multicriterial optimization methods to...

  7. On the identity of some weevil species described by Johann Christian Fabricius (1745-1808) in the Museum of Zoology of Copenhagen (Coleoptera, Cucujoidea, Curculionoidea, Tenebrionoidea).

    Science.gov (United States)

    Alonso-Zarazaga, Miguel A

    2014-01-01

    ) (from Attelabus), Nerthopssticticus (Fabricius, 1777) (from Curculio), Piezotracheluscrotalariae (Fabricius, 1802) (from Attelabus), and Poropterusgranulatus (Fabricius, 1802) (from Curculio). The junior homonym Brachycerusuva Fabricius, 1792 (non Sparrman, 1785) is replaced by Brachycerusfabricii nom. n. The following new synonymies are established: Brachycerusobesus (Fabricius, 1775) = Curculioscalaris Fabricius, 1777, syn. n., Brachydereslusitanicus (Fabricius, 1781) = Curculiomoratus Fabricius, 1798, syn. n., Brachypera (Brachypera) crinita (Boheman, 1834) = Curculiostriatus Fabricius, 1787, syn. n., Brachysomuserinaceus (Fabricius, 1802) = Brachysomusvillosulus (Germar, 1824), syn. n., Bronchusabruptecostatus (Gyllenhal, 1833) = Curculiospectrum Fabricius, 1802, syn. n., Bronchusnivosus (Sparrman, 1785) = Curculiorecurvus Fabricius, 1802, syn. n., Camptorhinustibialis (Sparrman, 1785) = Rhynchaenusalienatus Fabricius, 1802, syn. n., Coelocephalapionatrirostre (Fabricius, 1802) = Coelocephalapionluteirostre (Gerstäcker, 1854), syn. n., Cyrtoderescristatus (DeGeer, 1778) (Tenebrionidae) = Brachyceruscristatus Fabricius, 1798, syn. n., Desmidophorushebes (Fabricius, 1781) = Curculiotuberculatus Fabricius, 1792, syn. n., Donussalviae (Schrank, 1789) = Curculiodenticornis Fabricius, 1798, syn. n., Exomiasholosericeus (Fabricius, 1802) = Exomiaschevrolati (Boheman, 1842), syn. n., Nerthopssticticus (Fabricius, 1777) = Nerthopsguttatus (Olivier, 1807), syn. n., Phyllobiusoblongus (Linnaeus, 1758) = Curculiomali Fabricius, 1782, syn. n., and Rhinocyllusconicus (Froelich, 1792) = Bruchuspunctatus Fabricius, 1798, syn. n. Bronchussynthesys sp. n. is described to represent the concept of Hipporhinusspectrum sensu Marshall, 1904, a misidentification.

  8. Mechanisms of α-Synuclein Induced Synaptopathy in Parkinson's Disease

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    Jessika C. Bridi

    2018-02-01

    Full Text Available Parkinson's disease (PD is characterized by intracellular inclusions of aggregated and misfolded α-Synuclein (α-Syn, and the loss of dopaminergic (DA neurons in the brain. The resulting motor abnormalities mark the progression of PD, while non-motor symptoms can already be identified during early, prodromal stages of disease. Recent studies provide evidence that during this early prodromal phase, synaptic and axonal abnormalities occur before the degenerative loss of neuronal cell bodies. These early phenotypes can be attributed to synaptic accumulation of toxic α-Syn. Under physiological conditions, α-Syn functions in its native conformation as a soluble monomer. However, PD patient brains are characterized by intracellular inclusions of insoluble fibrils. Yet, oligomers and protofibrils of α-Syn have been identified to be the most toxic species, with their accumulation at presynaptic terminals affecting several steps of neurotransmitter release. First, high levels of α-Syn alter the size of synaptic vesicle pools and impair their trafficking. Second, α-Syn overexpression can either misregulate or redistribute proteins of the presynaptic SNARE complex. This leads to deficient tethering, docking, priming and fusion of synaptic vesicles at the active zone (AZ. Third, α-Syn inclusions are found within the presynaptic AZ, accompanied by a decrease in AZ protein levels. Furthermore, α-Syn overexpression reduces the endocytic retrieval of synaptic vesicle membranes during vesicle recycling. These presynaptic alterations mediated by accumulation of α-Syn, together impair neurotransmitter exocytosis and neuronal communication. Although α-Syn is expressed throughout the brain and enriched at presynaptic terminals, DA neurons are the most vulnerable in PD, likely because α-Syn directly regulates dopamine levels. Indeed, evidence suggests that α-Syn is a negative modulator of dopamine by inhibiting enzymes responsible for its synthesis. In

  9. Taxonomic review of Chinese species of ground beetles of the subgenus Pseudoophonus (genus Harpalus) (Coleoptera: Carabidae).

    Science.gov (United States)

    Kataev, Boris M; Liang, Hongbin

    2015-02-19

    A taxonomic review of 23 species of the subgenus Pseudoophonus Motschulsky, 1844, the genus Harpalus Latreille, 1802, occurring in China is given, and a key to these species is provided. The species are divided in three species groups and five subgroups, the distinctive characters of which are listed. The following new synonyms are established: Harpalus calceatus Duftschmid, 1812 = Anisodactylus propinquus Ballion, 1870, syn. n.; H. davidi (Tschitschérine, 1897) = H. kailiensis Huang, 1992, syn. n.; = H. adenticulatus Huang, 1992, syn. n.; = H. cilihumerus Huang, Hu & Sun, 1994, syn. n.; H. fokienensis Schauberger, 1930 = H. muciulus Huang, 1992, syn. n.; H. griseus (Panzer, 1796) = H. xinjiangensis Huang, Hu & Sun, 1994, syn. n.; H. hauserianus Schauberger, 1929 = H. disaogashimensis Huang, 1995, syn. n.; H. pastor pastor Motschulsky, 1844 = H. penglainus Huang, Hu & Sun, 1994, syn. n.; = H. chiloschizontus Huang, 1995, syn. n.; H. rufipes (DeGeer, 1774) = H. scabripectus Huang, Hu & Sun, 1994, syn. n.; H. singularis Tschitschérine, 1906 = H. chengjiangensis Huang, 1993, syn. n.; H. sinicus Hope, 1845 = H. periglabellus Huang, 1992, syn. n.; = H. longihornus Lei & Huang, 1997, syn. n.; and H. tridens Morawitz, 1862 = H. hypogeomysis Huang, 1993, syn. n.; = H. pilosus Huang, 1995, syn. n. Statuses of H. yinchuanensis Huang, 1993 and H. disimuciulus Huang, Lei, Yan & Hu, 1996 are discussed. Lectotypes are designated for H. capito Morawitz, 1862, H. japonicus Morawitz, 1862 and H. eous Tschitschérine, 1901. New data on distribution of Pseudoophonus species in China are provided. Harpalus babai Habu, 1973 is reported from China (Jiangxi) for the first time. The following taxa are recorded from the following Chinese provinces for the first time: H. ussuriensis Chaudoir, 1863 from Hunan; H. aenigma (Tschitschérine, 1897) from Hubei, Jiangxi, and Guangxi; H. pastor Motschulsky, 1844 from Beijing and Xizang; H. fokienensis Schauberger, 1930 from Anhui and Jiangxi; H

  10. Transcription factor 7-like 2 polymorphism and context-specific risk of metabolic syndrome, type 2 diabetes, and dyslipidemia

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    Abbasali Palizban

    2017-01-01

    Full Text Available Background: The transcription factor 7-like 2 gene (TCF7L2 is an element of the Wnt signaling pathway. There is lack of evidence if TCF7L2 has a functional role in lipid metabolism and regulation of the components constitutes the metabolic syndrome (MetSyn. The aims of this study were to evaluate whether the risk allele of TCF7L2 gene polymorphism is associated with dyslipidemia and MetSyn. Materials and Methods: The MetSyn subjects were participated only based on the National Cholesterol Education Program – Third Adult Treatment Panel criteria. In this case–control study, the DNA from MetSyn patients without (n = 90 and with type 2 diabetes (T2D (n = 94 were genotyped. Results: The results show that the genotype-phenotype for CC, CT/TT of TCF7L2 gene polymorphism correlated with body mass index and waist circumference in MetSyn and MetSyn + T2D subjects (r = −0.949 and r = −0.963, respectively. The subjects that only possess MetSyn but are not diabetics show the 2 h postprandial glucose and fasting blood glucose, glycated hemoglobin significantly lower (P < 0.05 than those subjects have both abnormality. The level of triglyceride in CT/TT carriers in MetSyn was higher than CC carriers (P = 0.025. A comparison with the controls subjects, the frequencies of the T allele in the groups of MetSyn (46.66% and MetSyn + T2D (47.34% show significantly different (P < 0.05. The odds ratios for T allele in (MetSyn/(normal, (MetSyn + T2D/(normal, and in (MetSyn + T2D/(MetSyn were 3.59 (95% confidence interval [CI], 1.33–9.67, P = 0.0093, 3.76 (95% CI, 1.40–10.07, P = 0.0068, and 1.08 (95% CI: 0.55– 2.11, P = 0.834, respectively. Conclusion: The results revealed the important insights essential for the role of TCF7L2 that the T allele of TCF7L2 plays a significant role in the susceptibility to dyslipidemia, MetSyn, and T2D.

  11. Striatal dopamine transmission is subtly modified in human A53Tα-synuclein overexpressing mice.

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    Nicola J Platt

    Full Text Available Mutations in, or elevated dosage of, SNCA, the gene for α-synuclein (α-syn, cause familial Parkinson's disease (PD. Mouse lines overexpressing the mutant human A53Tα-syn may represent a model of early PD. They display progressive motor deficits, abnormal cellular accumulation of α-syn, and deficits in dopamine-dependent corticostriatal plasticity, which, in the absence of overt nigrostriatal degeneration, suggest there are age-related deficits in striatal dopamine (DA signalling. In addition A53Tα-syn overexpression in cultured rodent neurons has been reported to inhibit transmitter release. Therefore here we have characterized for the first time DA release in the striatum of mice overexpressing human A53Tα-syn, and explored whether A53Tα-syn overexpression causes deficits in the release of DA. We used fast-scan cyclic voltammetry to detect DA release at carbon-fibre microelectrodes in acute striatal slices from two different lines of A53Tα-syn-overexpressing mice, at up to 24 months. In A53Tα-syn overexpressors, mean DA release evoked by a single stimulus pulse was not different from wild-types, in either dorsal striatum or nucleus accumbens. However the frequency responsiveness of DA release was slightly modified in A53Tα-syn overexpressors, and in particular showed slight deficiency when the confounding effects of striatal ACh acting at presynaptic nicotinic receptors (nAChRs were antagonized. The re-release of DA was unmodified after single-pulse stimuli, but after prolonged stimulation trains, A53Tα-syn overexpressors showed enhanced recovery of DA release at old age, in keeping with elevated striatal DA content. In summary, A53Tα-syn overexpression in mice causes subtle changes in the regulation of DA release in the striatum. While modest, these modifications may indicate or contribute to striatal dysfunction.

  12. Opposed Effects of Dityrosine Formation in Soluble and Aggregated α-Synuclein on Fibril Growth.

    Science.gov (United States)

    Wördehoff, Michael M; Shaykhalishahi, Hamed; Groß, Luca; Gremer, Lothar; Stoldt, Matthias; Buell, Alexander K; Willbold, Dieter; Hoyer, Wolfgang

    2017-10-13

    Parkinson's disease is the second most common neurodegenerative disease. It is characterized by aggregation of the protein α-synuclein (α-syn) in Lewy bodies, mitochondrial dysfunction, and increased oxidative stress in the substantia nigra. Oxidative stress leads to several modifications of biomolecules including dityrosine (DiY) crosslinking in proteins, which has recently been detected in α-syn in Lewy bodies from Parkinson's disease patients. Here we report that α-syn is highly susceptible to ultraviolet-induced DiY formation. We investigated DiY formation of α-syn and nine tyrosine-to-alanine mutants and monitored its effect on α-syn fibril formation in vitro. Ultraviolet irradiation of intrinsically disordered α-syn generates DiY-modified monomers and dimers, which inhibit fibril formation of unmodified α-syn by interfering with fibril elongation. The inhibition depends on both the DiY group and its integration into α-syn. When preformed α-syn fibrils are crosslinked by DiY formation, they gain increased resistance to denaturation. DiY-stabilized α-syn fibrils retain their high seeding efficiency even after being exposed to denaturant concentrations that completely depolymerize non-crosslinked seeds. Oxidative stress-associated DiY crosslinking of α-syn therefore entails two opposing effects: (i) inhibition of aggregation by DiY-modified monomers and dimers, and (ii) stabilization of fibrillar aggregates against potential degradation mechanisms, which can lead to promotion of aggregation, especially in the presence of secondary nucleation. Copyright © 2017 The Author(s). Published by Elsevier Ltd.. All rights reserved.

  13. α-Synuclein Heterocomplexes with β-Amyloid Are Increased in Red Blood Cells of Parkinson’s Disease Patients and Correlate with Disease Severity

    Science.gov (United States)

    Daniele, Simona; Frosini, Daniela; Pietrobono, Deborah; Petrozzi, Lucia; Lo Gerfo, Annalisa; Baldacci, Filippo; Fusi, Jonathan; Giacomelli, Chiara; Siciliano, Gabriele; Trincavelli, Maria Letizia; Franzoni, Ferdinando; Ceravolo, Roberto; Martini, Claudia; Bonuccelli, Ubaldo

    2018-01-01

    Neurodegenerative disorders (NDs) are characterized by abnormal accumulation/misfolding of specific proteins, primarily α-synuclein (α-syn), β-amyloid1–42 (Aβ1–42) and tau, in both brain and peripheral tissues. In addition to oligomers, the role of the interactions of α-syn with Aβ or tau has gradually emerged. Nevertheless, despite intensive research, NDs have no accepted peripheral markers for biochemical diagnosis. In this respect, Red Blood Cells (RBCs) are emerging as a valid peripheral model for the study of aging-related pathologies. Herein, a small cohort (N = 28) of patients affected by Parkinson’s disease (PD) and age-matched controls were enrolled to detect the content of α-syn (total and oligomeric), Aβ1–42 and tau (total and phosphorylated) in RBCs. Moreover, the presence of α-syn association with tau and Aβ1–42 was explored by co-immunoprecipitation/western blotting in the same cells, and quantitatively confirmed by immunoenzymatic assays. For the first time, PD patients were demonstrated to exhibit α-syn heterocomplexes with Aβ1–42 and tau in peripheral tissues; interestingly, α-syn-Aβ1–42 concentrations were increased in PD subjects with respect to healthy controls (HC), and directly correlated with disease severity and motor deficits. Moreover, total-α-syn levels were decreased in PD subjects and inversely related to their motor deficits. Finally, an increase of oligomeric-α-syn and phosphorylated-tau was observed in RBCs of the enrolled patients. The combination of three parameters (total-α-syn, phosphorylated-tau and α-syn-Aβ1–42 concentrations) provided the best fitting predictive index for discriminating PD patients from controls. Nevertheless further investigations should be required, overall, these data suggest α-syn hetero-aggregates in RBCs as a putative tool for the diagnosis of PD. PMID:29520218

  14. Association of Cigarette Smoking and Metabolic Syndrome in a Puerto Rican Adult Population

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    William A Calo

    2014-01-01

    Conclusion: This study supports previous reports of an increased risk of MetSyn among current smokers, particularly those with a heavier consumption. Tobacco control strategies, such as preventing smoking initiation and disseminating evidence-based cessation programs, are necessary to reduce the burden of MetSyn in Puerto Rico.

  15. Bifunctional Anti-Non-Amyloid Component α-Synuclein Nanobodies Are Protective In Situ.

    Directory of Open Access Journals (Sweden)

    David C Butler

    Full Text Available Misfolding, abnormal accumulation, and secretion of α-Synuclein (α-Syn are closely associated with synucleinopathies, including Parkinson's disease (PD. VH14 is a human single domain intrabody selected against the non-amyloid component (NAC hydrophobic interaction region of α-Syn, which is critical for initial aggregation. Using neuronal cell lines, we show that as a bifunctional nanobody fused to a proteasome targeting signal, VH14PEST can counteract heterologous proteostatic effects of mutant α-Syn on mutant huntingtin Exon1 and protect against α-Syn toxicity using propidium iodide or Annexin V readouts. We compared this anti-NAC candidate to NbSyn87, which binds to the C-terminus of α-Syn. NbSyn87PEST degrades α-Syn as well or better than VH14PEST. However, while both candidates reduced toxicity, VH14PEST appears more effective in both proteostatic stress and toxicity assays. These results show that the approach of reducing intracellular monomeric targets with novel antibody engineering technology should allow in vivo modulation of proteostatic pathologies.

  16. Impact of weight loss and maintenance with ad libitum diets varying in protein and glycemic index content on metabolic syndrome

    DEFF Research Database (Denmark)

    Papadaki, Angeliki; Linardakis, Manolis; Plada, Maria

    2014-01-01

    We investigated the effects of weight loss and maintenance with diets that varied with regard to protein content and glycemic index (GI) on metabolic syndrome (MetSyn) status.......We investigated the effects of weight loss and maintenance with diets that varied with regard to protein content and glycemic index (GI) on metabolic syndrome (MetSyn) status....

  17. The Hibernation of the oak Mildew

    NARCIS (Netherlands)

    Kerling, L.C.P.

    1966-01-01

    The oak mildew invaded Western Europa in the years 1908 and 1909. Since then this parasite, Microsphaera alphitoides Griff. & Maubl. (syn. M. quercina (Schw.) Burr.) has occurred regularly in the Netherlands on oak seedlings and oak coppice, mainly Quercus pedunculata Ehr. (syn. Q. robur L. ). After

  18. An Experimental and Theoretical Study of the Mechanism of Stannylcupration of α,β-Acetylenic Ketones and Esters

    DEFF Research Database (Denmark)

    Ahlquist, Mårten Sten Gösta; Nielsen, Thomas Eiland; Le Quement, Sebastian

    2006-01-01

    is observed, whereas for the corresponding ynoate substrate, the stereoselectivity can be affected by the reaction conditions: in the presence of methanol as proton donor, the initial syn-addition product can be trapped, whereas a syn/anti mixture is obtained in a non-protic solvent. This is in sharp contrast...

  19. CMS 2008-2010 Data Entrepreneurs Synthetic Public Use File

    Data.gov (United States)

    U.S. Department of Health & Human Services — The DE SynPUF is built from a 5 percent random sample of Medicare beneficiaries in 2008 and their claims from 2008 through 2010. The DE SynPUF contains five types of...

  20. Vi er ved at indføre en ny slags systemkontrol

    DEFF Research Database (Denmark)

    Booss-Bavnbek, Bernhelm

    2016-01-01

    Om forholdet mellem det formale og det sociale. Sindelagskontrol i 1970ernes Vesttyskland og dagens Danmark. Diskussionen mellem Alf Ross og Hal Koch. En tysk matematikers syn.......Om forholdet mellem det formale og det sociale. Sindelagskontrol i 1970ernes Vesttyskland og dagens Danmark. Diskussionen mellem Alf Ross og Hal Koch. En tysk matematikers syn....

  1. Evaluation of novel supports for selective and efficient enrichment of phosphorylated peptides

    CSIR Research Space (South Africa)

    Bensadek, D

    2011-06-01

    Full Text Available A series of novel emulsion based supports MagReSynTM TiO 2 (A-D) were evaluated using 32P labelled phosphopeptides and nano LC-MS/MS. The performance of MagReSynTM TiO 2 (D) was found to be significantly better in terms of selectivity and specificity...

  2. Passive immunization reduces behavioral and neuropathological deficits in an alpha-synuclein transgenic model of Lewy body disease.

    Science.gov (United States)

    Masliah, Eliezer; Rockenstein, Edward; Mante, Michael; Crews, Leslie; Spencer, Brian; Adame, Anthony; Patrick, Christina; Trejo, Margarita; Ubhi, Kiren; Rohn, Troy T; Mueller-Steiner, Sarah; Seubert, Peter; Barbour, Robin; McConlogue, Lisa; Buttini, Manuel; Games, Dora; Schenk, Dale

    2011-04-29

    Dementia with Lewy bodies (DLB) and Parkinson's Disease (PD) are common causes of motor and cognitive deficits and are associated with the abnormal accumulation of alpha-synuclein (α-syn). This study investigated whether passive immunization with a novel monoclonal α-syn antibody (9E4) against the C-terminus (CT) of α-syn was able to cross into the CNS and ameliorate the deficits associated with α-syn accumulation. In this study we demonstrate that 9E4 was effective at reducing behavioral deficits in the water maze, moreover, immunization with 9E4 reduced the accumulation of calpain-cleaved α-syn in axons and synapses and the associated neurodegenerative deficits. In vivo studies demonstrated that 9E4 traffics into the CNS, binds to cells that display α-syn accumulation and promotes α-syn clearance via the lysosomal pathway. These results suggest that passive immunization with monoclonal antibodies against the CT of α-syn may be of therapeutic relevance in patients with PD and DLB.

  3. Empirisme, rationalisme og den moralske følelse

    DEFF Research Database (Denmark)

    Nielsen, Carsten Fogh

    2003-01-01

    Sammenlignende diskussion af David Humes og Immanuel Kants syn på følelsernes rolle for den moralske dom......Sammenlignende diskussion af David Humes og Immanuel Kants syn på følelsernes rolle for den moralske dom...

  4. Volatile constituents of the fruit peel oil of Citrus maxima (J. Burman) Merrill. from Northeast India

    NARCIS (Netherlands)

    Bordoloi, A.K.; Pathak, M.G.; Sperkova, S.; Leclercq, P.A.

    1999-01-01

    The oil obtained by steam distillation of the fruit peels of cultivated Citrus maxima (T. Burman) Merrill [syn. C. decumana Linn.; syn. C. grandts (1.) Osbeck] was investigated by GC and GC/MS. Thirty-five compounds were identified accounting for 98.90/0 of the oil. The major constituent was

  5. Dermal phospho-alpha-synuclein deposits confirm REM sleep behaviour disorder as prodromal Parkinson's disease

    NARCIS (Netherlands)

    Doppler, Kathrin; Jentschke, Hanna-Maria; Schulmeyer, Lena; Vadasz, David; Janzen, Annette; Luster, Markus; Höffken, Helmut; Mayer, Geert; Brumberg, Joachim; Booij, Jan; Musacchio, Thomas; Klebe, Stephan; Sittig-Wiegand, Elisabeth; Volkmann, Jens; Sommer, Claudia; Oertel, Wolfgang H.

    2017-01-01

    Phosphorylated alpha-synuclein (p-alpha-syn) deposits, one of the neuropathological hallmarks of Parkinson's disease (PD), have recently been detected in dermal nerve fibres in PD patients with good specificity and sensitivity. Here, we studied whether p-alpha-syn may serve as a biomarker in

  6. An alpha-synuclein MRM assay with diagnostic potential for Parkinson's disease and monitoring disease progression

    Energy Technology Data Exchange (ETDEWEB)

    Yang, Li [Department of Pathology, University of Washington, Seattle WA USA; Stewart, Tessandra [Department of Pathology, University of Washington, Seattle WA USA; Shi, Min [Department of Pathology, University of Washington, Seattle WA USA; Pottiez, Gwenael [Department of Pathology, University of Washington, Seattle WA USA; Dator, Romel [Department of Pathology, University of Washington, Seattle WA USA; Wu, Rui [Department of Pathology, University of Washington, Seattle WA USA; Department of Pathology, No. 3 Hospital of Beijing University, Beijing China; Aro, Patrick [Department of Pathology, University of Washington, Seattle WA USA; Schuster, Robert J. [Department of Pathology, University of Washington, Seattle WA USA; Ginghina, Carmen [Department of Pathology, University of Washington, Seattle WA USA; Pan, Catherine [Department of Pathology, University of Washington, Seattle WA USA; Gao, Yuqian [Pacific Northwest National Laboratory, Richland WA USA; Qian, Weijun [Pacific Northwest National Laboratory, Richland WA USA; Zabetian, Cyrus P. [Parkinson' s Disease Research and Geriatric Research, Education and Clinical Center, Veterans Affairs Puget Sound Health Care System, Seattle WA USA; Department of Neurology, University of Washington School of Medicine, Seattle WA USA; Hu, Shu-Ching [Department of Neurology, University of Washington School of Medicine, Seattle WA USA; Quinn, Joseph F. [Department of Neurology, Oregon Health and Science University, Portland OR USA; Zhang, Jing [Department of Pathology, University of Washington, Seattle WA USA; Department of Pathology, Peking University Health Science Centre and Third Hospital, Beijing 100083 China

    2017-04-19

    Aim: The alpha-synuclein (α-syn) level in human cerebrospinal fluid (CSF), as measured by immunoassays, is promising as a Parkinson’s disease (PD) biomarker. However, the levels of total α-syn are inconsistent among studies with large cohorts and different measurement platforms. Total α-syn level also does not correlate with disease severity or progression. Here, we developed a highly sensitive Multiple Reaction Monitoring (MRM) method to measure absolute CSF α-syn peptide concentrations without prior enrichment or fractionation, aiming to discover new candidate biomarkers. Results: Six peptides covering 73% of protein sequence were reliably identified, and two were consistently quantified in cross-sectional and longitudinal cohorts. Absolute concentration of α-syn in human CSF was determined to be 2.1ng/mL. A unique α-syn peptide, TVEGAGSIAAATGFVK (81-96), displayed excellent correlation with previous immunoassay results in two independent PD cohorts (p < 0.001), correlated with disease severity, and its changes significantly tracked the disease progression longitudinally. Conclusions: An MRM assay to quantify human CSF α-syn was developed and optimized. Sixty clinical samples from cross-sectional and longitudinal PD cohorts were analyzed with this approach. Although further larger-scale validation is needed, the results suggest that α-syn peptide could serve as a promising biomarker in PD diagnosis and progression.

  7. Synapsin III Acts Downstream of Semaphorin 3A/CDK5 Signaling to Regulate Radial Migration and Orientation of Pyramidal Neurons In Vivo

    Directory of Open Access Journals (Sweden)

    Laura E. Perlini

    2015-04-01

    Full Text Available Synapsin III (SynIII is a phosphoprotein that is highly expressed at early stages of neuronal development. Whereas in vitro evidence suggests a role for SynIII in neuronal differentiation, in vivo evidence is lacking. Here, we demonstrate that in vivo downregulation of SynIII expression affects neuronal migration and orientation. By contrast, SynIII overexpression affects neuronal migration, but not orientation. We identify a cyclin-dependent kinase-5 (CDK5 phosphorylation site on SynIII and use phosphomutant rescue experiments to demonstrate its role in SynIII function. Finally, we show that SynIII phosphorylation at the CDK5 site is induced by activation of the semaphorin-3A (Sema3A pathway, which is implicated in migration and orientation of cortical pyramidal neurons (PNs and is known to activate CDK5. Thus, fine-tuning of SynIII expression and phosphorylation by CDK5 activation through Sema3A activity is essential for proper neuronal migration and orientation.

  8. Contact between the β1 and β2 Segments of α-Synuclein that Inhibits Amyloid Formation.

    Science.gov (United States)

    Shaykhalishahi, Hamed; Gauhar, Aziz; Wördehoff, Michael M; Grüning, Clara S R; Klein, Antonia N; Bannach, Oliver; Stoldt, Matthias; Willbold, Dieter; Härd, Torleif; Hoyer, Wolfgang

    2015-07-20

    Conversion of the intrinsically disordered protein α-synuclein (α-syn) into amyloid aggregates is a key process in Parkinson's disease. The sequence region 35-59 contains β-strand segments β1 and β2 of α-syn amyloid fibril models and most disease-related mutations. β1 and β2 frequently engage in transient interactions in monomeric α-syn. The consequences of β1-β2 contacts are evaluated by disulfide engineering, biophysical techniques, and cell viability assays. The double-cysteine mutant α-synCC, with a disulfide linking β1 and β2, is aggregation-incompetent and inhibits aggregation and toxicity of wild-type α-syn. We show that α-syn delays the aggregation of amyloid-β peptide and islet amyloid polypeptide involved in Alzheimer's disease and type 2 diabetes, an effect enhanced in the α-synCC mutant. Tertiary interactions in the β1-β2 region of α-syn interfere with the nucleation of amyloid formation, suggesting promotion of such interactions as a potential therapeutic approach. © 2015 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

  9. Thermal preparation effects on the x-ray diffractograms of compounds produced during flue gas desulfurization

    International Nuclear Information System (INIS)

    Wertz, D.L.; Burns, K.H.; Keeton, R.W.

    1995-01-01

    The diffractograms of syn-gypsum and of flue gas desulfurization products indicate that CaSO 4 · 2H 2 O is converted to other phase(s) when heated to 100 degrees C. Syn-hannebachite CaSO 3 ·0.5H 2 O is unaffected by similar thermal treatment. 6 refs., 3 figs

  10. Data in support of the identification of neuronal and astrocyte proteins interacting with extracellularly applied oligomeric and fibrillar α-synuclein assemblies by mass spectrometry.

    Science.gov (United States)

    Shrivastava, Amulya Nidhi; Redeker, Virginie; Fritz, Nicolas; Pieri, Laura; Almeida, Leandro G; Spolidoro, Maria; Liebmann, Thomas; Bousset, Luc; Renner, Marianne; Léna, Clément; Aperia, Anita; Melki, Ronald; Triller, Antoine

    2016-06-01

    α-Synuclein (α-syn) is the principal component of Lewy bodies, the pathophysiological hallmark of individuals affected by Parkinson disease (PD). This neuropathologic form of α-syn contributes to PD progression and propagation of α-syn assemblies between neurons. The data we present here support the proteomic analysis used to identify neuronal proteins that specifically interact with extracellularly applied oligomeric or fibrillar α-syn assemblies (conditions 1 and 2, respectively) (doi: 10.15252/embj.201591397[1]). α-syn assemblies and their cellular partner proteins were pulled down from neuronal cell lysed shortly after exposure to exogenous α-syn assemblies and the associated proteins were identified by mass spectrometry using a shotgun proteomic-based approach. We also performed experiments on pure cultures of astrocytes to identify astrocyte-specific proteins interacting with oligomeric or fibrillar α-syn (conditions 3 and 4, respectively). For each condition, proteins interacting selectively with α-syn assemblies were identified by comparison to proteins pulled-down from untreated cells used as controls. The mass spectrometry data, the database search and the peak lists have been deposited to the ProteomeXchange Consortium database via the PRIDE partner repository with the dataset identifiers PRIDE: PXD002256 to PRIDE: PXD002263 and doi: 10.6019/PXD002256 to 10.6019/PXD002263.

  11. DNA damage preceding dopamine neuron degeneration in A53T human α-synuclein transgenic mice

    International Nuclear Information System (INIS)

    Wang, Degui; Yu, Tianyu; Liu, Yongqiang; Yan, Jun; Guo, Yingli; Jing, Yuhong; Yang, Xuguang; Song, Yanfeng; Tian, Yingxia

    2016-01-01

    Defective DNA repair has been linked with age-associated neurodegenerative disorders. Parkinson's disease (PD) is a progressive neurodegenerative disorder caused by genetic and environmental factors. Whether damages to nuclear DNA contribute to neurodegeneration of PD still remain obscure. in this study we aim to explore whether nuclear DNA damage induce dopamine neuron degeneration in A53T human α-Synuclein over expressed mouse model. We investigated the effects of X-ray irradiation on A53T-α-Syn MEFs and A53T-α-Syn transgene mice. Our results indicate that A53T-α-Syn MEFs show a prolonged DNA damage repair process and senescense phenotype. DNA damage preceded onset of motor phenotype in A53T-α-Syn transgenic mice and decrease the number of nigrostriatal dopaminergic neurons. Neurons of A53T-α-Syn transgenic mice are more fragile to DNA damages. - Highlights: • This study explore contribution of DNA damage to neurodegeneration in Parkinson's disease mice. • A53T-α-Syn MEF cells show a prolonged DNA damage repair process and senescense phenotype. • DNA damage preceded onset of motor phenotype in A53T-α-Syn transgenic mice. • DNA damage decrease the number of nigrostriatal dopaminergic neurons. • Neurons of A53T-α-Syn transgenic mice are more fragile to DNA damages.

  12. Bimolecular Fluorescence Complementation of Alpha-synuclein Demonstrates its Oligomerization with Dopaminergic Phenotype in Mice

    Directory of Open Access Journals (Sweden)

    Waijiao Cai

    2018-03-01

    Full Text Available Alpha-synuclein (αSyn is encoded by the first causal gene identified in Parkinson's disease (PD and is the main component of Lewy bodies, a pathological hallmark of PD. aSyn-based animal models have contributed to our understanding of PD pathophysiology and to the development of therapeutics. Overexpression of human wildtype αSyn by viral vectors in rodents recapitulates the loss of dopaminergic neurons from the substantia nigra, another defining pathological feature of the disease. The development of a rat model exhibiting bimolecular fluorescence complementation (BiFC of αSyn by recombinant adeno-associated virus facilitates detection of the toxic αSyn oligomers species. We report here neurochemical, neuropathological and behavioral characterization of BiFC of αSyn in mice. Overexpression and oligomerization of αSyn through BiFC is detected by conjugated fluorescence. Reduced striatal dopamine and loss of nigral dopaminergic neurons are accompanied neuroinflammation and abnormal motor activities. Our mouse model may provide a valuable tool to study the role of αSyn in PD and to explore therapeutic approaches. Keywords: Parkinson's disease, Alpha-synuclein, Mouse model, Oligomers, Neuroinflammation

  13. Lysosomal enzyme cathepsin B enhances the aggregate forming activity of exogenous α-synuclein fibrils.

    Science.gov (United States)

    Tsujimura, Atsushi; Taguchi, Katsutoshi; Watanabe, Yoshihisa; Tatebe, Harutsugu; Tokuda, Takahiko; Mizuno, Toshiki; Tanaka, Masaki

    2015-01-01

    The formation of intracellular aggregates containing α-synuclein (α-Syn) is one of the key steps in the progression of Parkinson's disease and dementia with Lewy bodies. Recently, it was reported that pathological α-Syn fibrils can undergo cell-to-cell transmission and form Lewy body-like aggregates. However, little is known about how they form α-Syn aggregates from fibril seeds. Here, we developed an assay to study the process of aggregate formation using fluorescent protein-tagged α-Syn-expressing cells and examined the aggregate forming activity of exogenous α-Syn fibrils. α-Syn fibril-induced formation of intracellular aggregates was suppressed by a cathepsin B specific inhibitor, but not by a cathepsin D inhibitor. α-Syn fibrils pretreated with cathepsin B in vitro enhanced seeding activity in cells. Knockdown of cathepsin B also reduced fibril-induced aggregate formation. Moreover, using LAMP-1 immunocytochemistry and live-cell imaging, we observed that these aggregates initially occurred in the lysosome. They then rapidly grew larger and moved outside the boundary of the lysosome within one day. These results suggest that the lysosomal protease cathepsin B is involved in triggering intracellular aggregate formation by α-Syn fibrils. Copyright © 2015. Published by Elsevier Inc.

  14. Nota sinonímica em Chinaia Bruner & Metcalf (Hemiptera, Cicadellidae, Neocoelidiinae Synonymic note in Chinaia Bruner & Metcalf (Hemiptera, Cicadellidae, Neocoelidiinae

    Directory of Open Access Journals (Sweden)

    Ana Paula Marques-Costa

    2009-01-01

    Full Text Available Uma nova sinonímia é proposta: Chinaia caprella Kramer, 1958 = Neocoelidiana chlorata DeLong & Kolbe, 1975 syn. nov. A espécie é redescrita e ilustrada.A new synonym is proposed: Chinaia caprella Kramer, 1958 = Neocoelidiana chlorata DeLong & Kolbe, 1975 syn. nov. The species is redescribed and illustrated.

  15. Symptom Dimensions of Depression and Anxiety and the Metabolic Syndrome

    NARCIS (Netherlands)

    Luppino, Floriana S.; Dortland, Arianne K. B. van Reedt; Wardenaar, Klaas J.; Bouvy, Paul F.; Giltay, Erik J.; Zitman, Frans G.; Penninx, Brenda W. J. H.

    Objective: To investigate the association between depression and anxiety symptoms and the metabolic syndrome (MetSyn), using a dimensional approach. The association between depression and anxiety, on the one hand, and the MetSyn as a cluster or its individual components, on the other hand, is

  16. An isotope trace element study of the East Greenland Tertiary dyke swarm

    DEFF Research Database (Denmark)

    Hanghøj, Karen; Storey, Michael; Stecher, Ole

    2003-01-01

    Dykes of the East Greenland Tertiary dyke swarm can be divided into pre- and syn-break-up tholeiitic dykes, and post-break-up transitional dykes. Of the pre- and syn-break-up dykes, the most abundant group (Tholeiitic Series; TS) has major element compositions similar to the main part of the East...

  17. Syntaxin 1A interaction with the dopamine transporter promotes amphetamine-induced dopamine efflux

    DEFF Research Database (Denmark)

    Binda, Francesca; Dipace, Concetta; Bowton, Erica

    2008-01-01

    of the dopamine (DA) transporter (DAT) as the site of direct interaction with SYN1A. Amphetamine (AMPH) increases the association of SYN1A with human DAT (hDAT) in a heterologous expression system (hDAT cells) and with native DAT in murine striatal synaptosomes. Immunoprecipitation of DAT from the biotinylated...

  18. The metabolic syndrome and related characteristics in major depression: inpatients and outpatients compared metabolic differences across treatment settings

    NARCIS (Netherlands)

    Luppino, F.S.; Bouvy, P.F.; Giltay, E.J.; Penninx, B.W.J.H.; Zitman, F. G.

    2014-01-01

    Objective: We aimed to systematically compare patients with major depressive disorder from three different treatment settings (a primary care outpatient, a secondary care outpatient and one inpatient sample), with regard to metabolic syndrome (MetSyn) prevalences, individual MetSyn components and

  19. The metabolic syndrome and related characteristics in major depression : inpatients and outpatients compared Metabolic differences across treatment settings

    NARCIS (Netherlands)

    Luppino, Floriana S.; Bouvy, Paul F.; Giltay, Erik J.; Penninx, Brenda W. J. H.; Zitman, Frans G.

    Objective: We aimed to systematically compare patients with major depressive disorder from three different treatment settings (a primary care outpatient, a secondary care outpatient and one inpatient sample), with regard to metabolic syndrome (MetSyn) prevalences, individual MetSyn components and

  20. Eros and phronesis

    DEFF Research Database (Denmark)

    Hansen, Finn Thorbjørn

    2007-01-01

    Artiklen ser særlig nærmere på Hubert Dreyfus syn på phronesis-dimensionen i ekspertens arbejde og jeg kritiserer ham for at have et for ensidigt eksistentialistisk syn på phronesis-begrebet gennem Hannah Arendt læsning, der vægter den eksistensfilosofiske "meaning-receiving" dimension....

  1. Enrichment of anaerobic syngas-converting bacteria from thermophilic bioreactor sludge.

    Science.gov (United States)

    Alves, Joana I; Stams, Alfons J M; Plugge, Caroline M; Alves, M Madalena; Sousa, Diana Z

    2013-12-01

    Thermophilic (55 °C) anaerobic microbial communities were enriched with a synthetic syngas mixture (composed of CO, H2 , and CO2 ) or with CO alone. Cultures T-Syn and T-CO were incubated and successively transferred with syngas (16 transfers) or CO (9 transfers), respectively, with increasing CO partial pressures from 0.09 to 0.88 bar. Culture T-Syn, after 4 successive transfers with syngas, was also incubated with CO and subsequently transferred (9 transfers) with solely this substrate - cultures T-Syn-CO. Incubation with syngas and CO caused a rapid decrease in the microbial diversity of the anaerobic consortium. T-Syn and T-Syn-CO showed identical microbial composition and were dominated by Desulfotomaculum and Caloribacterium species. Incubation initiated with CO resulted in the enrichment of bacteria from the genera Thermincola and Thermoanaerobacter. Methane was detected in the first two to three transfers of T-Syn, but production ceased afterward. Acetate was the main product formed by T-Syn and T-Syn-CO. Enriched T-CO cultures showed a two-phase conversion, in which H2 was formed first and then converted to acetate. This research provides insight into how thermophilic anaerobic communities develop using syngas/CO as sole energy and carbon source can be steered for specific end products and subsequent microbial synthesis of chemicals. © 2013 Federation of European Microbiological Societies. Published by John Wiley & Sons Ltd. All rights reserved.

  2. Den inderlige deltagelse

    DEFF Research Database (Denmark)

    Baunvig, Katrine Frøkjær

    2014-01-01

    Præsentation af ph.d.-afhandlingen "Forsamlingen først : N.F.S. Grundtvigs og Émile Durkheims syn på fællesskab"......Præsentation af ph.d.-afhandlingen "Forsamlingen først : N.F.S. Grundtvigs og Émile Durkheims syn på fællesskab"...

  3. Dopamine-mediated oxidation of methionine 127 in α-synuclein causes cytotoxicity and oligomerization of α-synuclein.

    Directory of Open Access Journals (Sweden)

    Kazuhiro Nakaso

    Full Text Available Parkinson's disease (PD is a neurodegenerative disorder characterized by the selective loss of dopaminergic neurons and the presence of Lewy bodies. Many recent studies focused on the interaction between α-synuclein (α-syn and dopamine in the pathogenesis of PD, and fluorescent anisotropy suggested that the C-terminal region of α-syn may be a target for modification by dopamine. However, it is not well understood why PD-related pathogenesis occurs selectively in dopaminergic neurons. We investigated the interaction between dopamine and α-syn with regard to cytotoxicity. A soluble oligomer was formed by co-incubating α-syn and dopamine in vitro. To clarify the effect of dopamine on α-syn in cells, we generated PC12 cells expressing human α-syn, as well as the α-syn mutants, M116A, Y125D, M127A, S129A, and M116A/M127A, in a tetracycline-inducible manner (PC12-TetOFF-α-syn. Overexpression of wildtype α-syn in catecholaminergic PC12 cells decreased cell viability in long-term cultures, while a competitive inhibitor of tyrosine hydroxylase blocked this vulnerability, suggesting that α-syn-related cytotoxicity is associated with dopamine metabolism. The vulnerabilities of all mutant cell lines were lower than that of wildtype α-syn-expressing cells. Moreover, α-syn containing dopamine-mediated oxidized methionine (Met(O was detected in PC12-TetOFF-α-syn. Met(O was lower in methionine mutant cells, especially in the M127A or M116A/M127A mutants, but also in the Y125D and S129A mutants. Co-incubation of dopamine and the 125YEMPS129 peptide enhanced the production of H2O2, which may oxidize methionine residues and convert them to Met(O. Y125- or S129-lacking peptides did not enhance the dopamine-related production of H2O2. Our results suggest that M127 is the major target for oxidative modification by dopamine, and that Y125 and S129 may act as enhancers of this modification. These results may describe a mechanism of dopaminergic neuron

  4. Redox reactions of the α-synuclein-Cu(2+) complex and their effects on neuronal cell viability.

    Science.gov (United States)

    Wang, Chengshan; Liu, Lin; Zhang, Lin; Peng, Yong; Zhou, Feimeng

    2010-09-21

    α-Synuclein (α-syn), a presynaptic protein believed to play an important role in neuropathology in Parkinson's disease (PD), is known to bind Cu(2+). Cu(2+) has been shown to accelerate the aggregation of α-syn to form various toxic aggregates in vitro. Copper is also a redox-active metal whose complexes with amyloidogenic proteins/peptides have been linked to oxidative stress in major neurodegenerative diseases. In this work, the formation of the Cu(2+) complex with α-syn or with an N-terminal peptide, α-syn(1-19), was confirmed with electrospray-mass spectrometry (ES-MS). The redox potentials of the Cu(2+) complex with α-syn (α-syn-Cu(2+)) and α-syn(1-19) were determined to be 0.018 and 0.053 V, respectively. Furthermore, the Cu(2+) center(s) can be readily reduced to Cu(+), and possible reactions of α-syn-Cu(2+) with cellular species (e.g., O(2), ascorbic acid, and dopamine) were investigated. The occurrence of a redox reaction can be rationalized by comparing the redox potential of the α-syn-Cu(2+) complex to that of the specific cellular species. For example, ascorbic acid can directly reduce α-syn-Cu(2+) to α-syn-Cu(+), setting up a redox cycle in which O(2) is reduced to H(2)O(2) and cellular redox species is continuously exhausted. In addition, the H(2)O(2) generated was demonstrated to reduce viability of the neuroblastoma SY-HY5Y cells. Although our results ruled out the direct oxidation of dopamine by α-syn-Cu(2+), the H(2)O(2) generated in the presence of α-syn-Cu(2+) can oxidize dopamine. Our results suggest that oxidative stress is at least partially responsible for the loss of dopaminergic cells in PD brain and reveal the multifaceted role of the α-syn-Cu(2+) complex in oxidative stress associated with PD symptoms.

  5. CSF tau and β-amyloid predict cerebral synucleinopathy in autopsied Lewy body disorders.

    Science.gov (United States)

    Irwin, David J; Xie, Sharon X; Coughlin, David; Nevler, Naomi; Akhtar, Rizwan S; McMillan, Corey T; Lee, Edward B; Wolk, David A; Weintraub, Daniel; Chen-Plotkin, Alice; Duda, John E; Spindler, Meredith; Siderowf, Andrew; Hurtig, Howard I; Shaw, Leslie M; Grossman, Murray; Trojanowski, John Q

    2018-03-20

    To test the association of antemortem CSF biomarkers with postmortem pathology in Lewy body disorders (LBD). Patients with autopsy-confirmed LBD (n = 24) and autopsy-confirmed Alzheimer disease (AD) (n = 23) and cognitively normal (n = 36) controls were studied. In LBD, neuropathologic criteria defined Lewy body α-synuclein (SYN) stages with medium/high AD copathology (SYN + AD = 10) and low/no AD copathology (SYN - AD = 14). Ordinal pathology scores for tau, β-amyloid (Aβ), and SYN pathology were averaged across 7 cortical regions to obtain a global cerebral score for each pathology. CSF total tau (t-tau), phosphorylated tau at threonine 181 , and Aβ 1-42 levels were compared between LBD and control groups and correlated with global cerebral pathology scores in LBD with linear regression. Diagnostic accuracy for postmortem categorization of LBD into SYN + AD vs SYN - AD or neocortical vs brainstem/limbic SYN stage was tested with receiver operating curves. SYN + AD had higher CSF t-tau (mean difference 27.0 ± 8.6 pg/mL) and lower Aβ 1-42 (mean difference -84.0 ± 22.9 g/mL) compared to SYN - AD ( p CSF t-tau ( R 2 = 0.15-0.16, p CSF Aβ 1-42 ( R 2 = 0.31, p CSF t-tau/Aβ 1-42 ratio ( R 2 = 0.27, p = 0.01). CSF t-tau/Aβ 1-42 ratio had 100% specificity and 90% sensitivity for SYN + AD, and CSF Aβ 1-42 had 77% specificity and 82% sensitivity for neocortical SYN stage. Higher antemortem CSF t-tau/Aβ 1-42 and lower Aβ 1-42 levels are predictive of increasing cerebral AD and SYN pathology. These biomarkers may identify patients with LBD vulnerable to cortical SYN pathology who may benefit from both SYN and AD-targeted disease-modifying therapies. © 2018 American Academy of Neurology.

  6. DNA damage preceding dopamine neuron degeneration in A53T human α-synuclein transgenic mice.

    Science.gov (United States)

    Wang, Degui; Yu, Tianyu; Liu, Yongqiang; Yan, Jun; Guo, Yingli; Jing, Yuhong; Yang, Xuguang; Song, Yanfeng; Tian, Yingxia

    2016-12-02

    Defective DNA repair has been linked with age-associated neurodegenerative disorders. Parkinson's disease (PD) is a progressive neurodegenerative disorder caused by genetic and environmental factors. Whether damages to nuclear DNA contribute to neurodegeneration of PD still remain obscure. in this study we aim to explore whether nuclear DNA damage induce dopamine neuron degeneration in A53T human α-Synuclein over expressed mouse model. We investigated the effects of X-ray irradiation on A53T-α-Syn MEFs and A53T-α-Syn transgene mice. Our results indicate that A53T-α-Syn MEFs show a prolonged DNA damage repair process and senescense phenotype. DNA damage preceded onset of motor phenotype in A53T-α-Syn transgenic mice and decrease the number of nigrostriatal dopaminergic neurons. Neurons of A53T-α-Syn transgenic mice are more fragile to DNA damages. Copyright © 2016 Elsevier Inc. All rights reserved.

  7. Revisão do gênero Potnia Stål (Homoptera, Membracidae, Membracinae, Hoplophorionini Revision of the genus Potnia Stål (Homoptera, Membracidae, Membracinae, Hoplophorionini

    Directory of Open Access Journals (Sweden)

    Antônio J Creão-Duarte

    1996-01-01

    Full Text Available Fifteen species of Potnia Stål, 1866 are presented with descriptions, illustrations and a key for identification. The following nomenclatural changes are introduced: P. knightae sp.n. (from Guiana, P. miracyae sp.n. (from Costa Rica, P. diringshofeni sp.n. (from Brasil, P. webbi sp.n. (from Brazil, P. turrialbensis sp.n. (from Costa Rica, P. pinheiroi sp.n. (from Brazil, P. tapuruquarensis sp.n. (from Brasil, P. cornigera sp.n. (from Brazil and P. inca sp.n. (from Peru. Potnia venosa (Germar, 1821 = Aconophora nigrivittata Walker, 1851, syn.n. = Potnia perobtusa Fowler, 1894, syn.n.. Potnia brevicornis Fowler, 1894, sp. reval. = Potnia brunneifrontis Funkhouser, 1943, syn.n. = Potnia maculata Funkhouser, 1943, syn.n.. Potnia jacula (Fabricius, 1803 = Potnia orthosoma Fonseca & Diringshofen, 1974, syn.n.

  8. Molecular identification of fungi isolated from bean tissues with anthracnose symptoms

    International Nuclear Information System (INIS)

    Vanegas Berrouet, Katherin M; Gutierrez Sanchez, Pablo A; Marin Montoya, Mauricio A

    2014-01-01

    In this work, endophytic fungi from leaves and pods of bean presenting anthracnose symptoms were isolated from plants collected at different municipalities in the province of Antioquia (Colombia). Isolates were identified by sequencing the RDNA its regions together with the examination of reproductive structures during sporulation in culture media. Colletotrichum lindemuthianum, the causal agent of anthracnose was isolated in all samples showing symptoms of this disease. These results were confirmed by duplex PCR using the specific primers CD1/CD2 and CY1/CY2. Additionally, 17 endophytic fungi were obtained. Fourteen isolates did not sporulate in culture media (Mycelia sterilia) but were identified by phylogenetic analysis of the regions as the Ascomycetes: Leptosphaerulina (3), Diaporthe (3), Gibberella (1), Plectosphaerella (1) and Biscogniauxia (1) and the Mitosporic genera phoma (2), Alternaria (2) and Stemphylium (1) Three isolates were identified combining morphological and molecular analysis as Fusarium (2) and Curvularia lunata (1). This work increases our knowledge of the mycobiota of legume plants and will serve as support of future studies aimed at determining the effect of these fungi on the development of anthracnose as well as other problems affecting the bean crop.

  9. Repression of germline RNAi pathways in somatic cells by retinoblastoma pathway chromatin complexes.

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    Xiaoyun Wu

    Full Text Available The retinoblastoma (Rb tumor suppressor acts with a number of chromatin cofactors in a wide range of species to suppress cell proliferation. The Caenorhabditis elegans retinoblastoma gene and many of these cofactors, called synMuv B genes, were identified in genetic screens for cell lineage defects caused by growth factor misexpression. Mutations in many synMuv B genes, including lin-35/Rb, also cause somatic misexpression of the germline RNA processing P granules and enhanced RNAi. We show here that multiple small RNA components, including a set of germline-specific Argonaute genes, are misexpressed in the soma of many synMuv B mutant animals, revealing one node for enhanced RNAi. Distinct classes of synMuv B mutants differ in the subcellular architecture of their misexpressed P granules, their profile of misexpressed small RNA and P granule genes, as well as their enhancement of RNAi and the related silencing of transgenes. These differences define three classes of synMuv B genes, representing three chromatin complexes: a LIN-35/Rb-containing DRM core complex, a SUMO-recruited Mec complex, and a synMuv B heterochromatin complex, suggesting that intersecting chromatin pathways regulate the repression of small RNA and P granule genes in the soma and the potency of RNAi. Consistent with this, the DRM complex and the synMuv B heterochromatin complex were genetically additive and displayed distinct antagonistic interactions with the MES-4 histone methyltransferase and the MRG-1 chromodomain protein, two germline chromatin regulators required for the synMuv phenotype and the somatic misexpression of P granule components. Thus intersecting synMuv B chromatin pathways conspire with synMuv B suppressor chromatin factors to regulate the expression of small RNA pathway genes, which enables heightened RNAi response. Regulation of small RNA pathway genes by human retinoblastoma may also underlie its role as a tumor suppressor gene.

  10. A review of the New World Atteva Walker moths (Yponomeutidae, Attevinae Resenha das mariposas do gênero Atteva Walker do Novo Mundo (Yponomeutidae, Attevinae

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    Vitor O. Becker

    2009-01-01

    Full Text Available The New World species of Atteva Walker are reviewed and illustrated in colour. One name: A. pustulella (Fabricius, nom. rev. and three species: A. aurea (Fitch, sp. rev., A. floridana (Neumoegen, sp. rev. and A. gemmata (Grote, sp. rev. are reinstated; five names are synonymised under A. aurea: Poeciloptera compta Clemens, syn. n., A. edithella Busck, syn. n., A. exquisita Busck, syn. n., A. ergatica Walsingham, syn. n. and A. microsticta Walsingham, syn. n.; four new species are described: A. rawlinsi sp. n., from the Dominican Republic, A. sidereoides sp. n., from Jamaica, A. entermedia sp. n., from Antigua, and A. zebrina sp. n., from Brazil; lectotypes for A. floridana and A. glaucopidella (Guenée (=fulviguttata are also designated.As species de Atteva Walker são revistas e ilustradas em cores. Um nome: A. pustulella (Fabricius, nom. rev. e três espécies: A. aurea (Fitch, sp. rev., A. floridana (Neumoegen, sp. rev. and A. gemmata (Grote, sp. rev. são restabelecidos; cinco nomes são considerados sinônimos recentes de A.aurea: Poeciloptera compta Clemens, syn. n., A. edithella Busck, syn. n., A. exquisita Busck, syn. n., A. ergatica Walsingham, syn. n. e A. microsticta Walsingham, syn. n.; quatro espécies novas são descritas: A. rawlinsi sp. n., da República Dominica, A. sidereoides sp. n., da Jamaica, A. entermedia sp. n., de Antigua, e A. zebrina sp. n., do Brazil; são designados lectótipos para A. floridana e A. glaucopidella (Guenée (=fulviguttata.

  11. Anti-human α-synuclein N-terminal peptide antibody protects against dopaminergic cell death and ameliorates behavioral deficits in an AAV-α-synuclein rat model of Parkinson's disease.

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    Md Shahaduzzaman

    Full Text Available The protein α-synuclein (α-Syn has a central role in the pathogenesis of Parkinson's disease (PD and immunotherapeutic approaches targeting this molecule have shown promising results. In this study, novel antibodies were generated against specific peptides from full length human α-Syn and evaluated for effectiveness in ameliorating α-Syn-induced cell death and behavioral deficits in an AAV-α-Syn expressing rat model of PD. Fisher 344 rats were injected with rAAV vector into the right substantia nigra (SN, while control rats received an AAV vector expressing green fluorescent protein (GFP. Beginning one week after injection of the AAV-α-Syn vectors, rats were treated intraperitoneally with either control IgG or antibodies against the N-terminal (AB1, or central region (AB2 of α-Syn. An unbiased stereological estimation of TH+, NeuN+, and OX6 (MHC-II immunostaining revealed that the α-Syn peptide antibodies (AB1 and AB2 significantly inhibited α-Syn-induced dopaminergic cell (DA and NeuN+ cell loss (one-way ANOVA (F (3, 30 = 5.8, p = 0.002 and (F (3, 29 = 7.92, p = 0.002 respectively, as well as decreasing the number of activated microglia in the ipsilateral SN (one-way ANOVA F = 14.09; p = 0.0003. Antibody treated animals also had lower levels of α-Syn in the ipsilateral SN (one-way ANOVA F (7, 37 = 9.786; p = 0.0001 and demonstrated a partial intermediate improvement of the behavioral deficits. Our data suggest that, in particular, an α-Syn peptide antibody against the N-terminal region of the protein can protect against DA neuron loss and, to some extent behavioral deficits. As such, these results may be a potential therapeutic strategy for halting the progression of PD.

  12. Nomenclatural Studies Toward a World List of Diptera Genus-Group Names. Part V: Pierre-Justin-Marie Macquart.

    Science.gov (United States)

    Evenhuis, Neal L; Pape, Thomas; Pont, Adrian C

    2016-09-30

    [Ephydridae]; Pleurocerina Macquart, 1851[Conopidae]; Pteropexus Macquart, 1846 [Acroceridae]; Semiomyia Macquart, 1848 [Tachinidae]; Teremyia Macquart, 1835 [Lonchaeidae].        The following names are new synonymies of their respective senior synonyms: -genus-group names: Acemyia Macquart, 1834 of Acemya Robineau-Desvoidy, 1830, n. syn. [Tachinidae]; Acrochoeta Macquart, 1835 of Acrochaeta Wiedemann, 1830, n. syn. [Stratiomyidae]; Atractea Agassiz, 1846 of Atractia Macquart, 1838, n. syn. [Asilidae]; Aulacocephala Brauer, 1863 of Aulacephala Macquart, 1851, n. syn. [Tachinidae]; Beckeriella Williston, 1897 of Notacanthina Macquart, 1834, n. syn. [Ephydridae]; Caenosia Macquart, 1835 of Coenosia Meigen, 1826, n. syn. [Muscidae]; Ceromyia Macquart, 1834 of Ceromya Robineau-Desvoidy, 1830, n. syn. [Tachinidae]; Chiromysa Macquart, 1835 of Chiromyza Wiedemann, 1820, n. syn. [Stratiomyidae]; Chrisochlora Macquart, 1835 of Chrysochlora Latreille, 1829, n. syn. [Stratiomyidae]; Chrysopyla Macquart, 1840 of Chrysopilus Macquart, 1826, n. syn. [Rhagionidae]; Cleigaster Macquart, 1844 of Cleigastra Macquart, 1835, n. syn. [Scathophagidae]; Clyto Macquart, 1835 of Clytho Robineau-Desvoidy, 1830, n. syn. [Tachinidae]; Cordylura Macquart, 1835 of Cordilura Fallén, 1810, n. syn. [Scathophagidae]; Craspedochaeta Marschall, 1873 of Anthomyia Meigen, 1803, n. syn. [Anthomyiidae]; Cyrtonevra Agassiz, 1846 of Graphomya Robineau-Desvoidy, 1830, n. syn. [Muscidae]; Diaphora Macquart, 1834 of Diaphorus Meigen, 1824, n. syn. [Dolichopodidae]; Dichoeta Macquart, 1835 of Dichaeta Meigen, 1830, n. syn. [Ephydridae]; Dichromyia Macquart, 1844 of Dichromya Robineau-Desvoidy, 1830, n. syn. [Heleomyzidae]; Diphysa Macquart, 1838 of Archistratiomys Enderlein, 1913, n. syn. [Stratiomyidae]; Echinomyia Fischer von Waldheim, 1808 of Tachina Meigen, 1803, n. syn. [Tachinidae]; Egina Macquart, 1835 of Eginia Robineau-Desvoidy, 1830, n. syn. [Muscidae]; Hematobia Macquart, 1850 of Haematobia Le

  13. C-Terminal Tyrosine Residue Modifications Modulate the Protective Phosphorylation of Serine 129 of α-Synuclein in a Yeast Model of Parkinson's Disease.

    Science.gov (United States)

    Kleinknecht, Alexandra; Popova, Blagovesta; Lázaro, Diana F; Pinho, Raquel; Valerius, Oliver; Outeiro, Tiago F; Braus, Gerhard H

    2016-06-01

    Parkinson´s disease (PD) is characterized by the presence of proteinaceous inclusions called Lewy bodies that are mainly composed of α-synuclein (αSyn). Elevated levels of oxidative or nitrative stresses have been implicated in αSyn related toxicity. Phosphorylation of αSyn on serine 129 (S129) modulates autophagic clearance of inclusions and is prominently found in Lewy bodies. The neighboring tyrosine residues Y125, Y133 and Y136 are phosphorylation and nitration sites. Using a yeast model of PD, we found that Y133 is required for protective S129 phosphorylation and for S129-independent proteasome clearance. αSyn can be nitrated and form stable covalent dimers originating from covalent crosslinking of two tyrosine residues. Nitrated tyrosine residues, but not di-tyrosine-crosslinked dimers, contributed to αSyn cytotoxicity and aggregation. Analysis of tyrosine residues involved in nitration and crosslinking revealed that the C-terminus, rather than the N-terminus of αSyn, is modified by nitration and di-tyrosine formation. The nitration level of wild-type αSyn was higher compared to that of A30P mutant that is non-toxic in yeast. A30P formed more dimers than wild-type αSyn, suggesting that dimer formation represents a cellular detoxification pathway in yeast. Deletion of the yeast flavohemoglobin gene YHB1 resulted in an increase of cellular nitrative stress and cytotoxicity leading to enhanced aggregation of A30P αSyn. Yhb1 protected yeast from A30P-induced mitochondrial fragmentation and peroxynitrite-induced nitrative stress. Strikingly, overexpression of neuroglobin, the human homolog of YHB1, protected against αSyn inclusion formation in mammalian cells. In total, our data suggest that C-terminal Y133 plays a major role in αSyn aggregate clearance by supporting the protective S129 phosphorylation for autophagy and by promoting proteasome clearance. C-terminal tyrosine nitration increases pathogenicity and can only be partially detoxified by αSyn

  14. Seasonal egg output of gastro-intestinal parasites in wild ungulates in a mediterranean area (central Italy

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    Marta Magi

    2006-03-01

    Full Text Available Abstract Seasonal egg (or oocyst output of gastro-intestinal parasites of wild ungulates was studied in a Mediterranean protected area, the Monti Livornesi Park (Livorno, Tuscany region, Central Italy. Samples of faeces of wild boars (Sus scrofa and mouflons (Ovis ammon were collected monthly for one year. The observed trends of egg output were analysed taking into account seasonal variations of temperature and rainfall, life-cycle and survival strategy of parasites, and health condition of hosts. In our Mediterranean study area, the peaks of egg output appear in different months according to different biology and survival strategies of parasites. Riassunto Emissione stagionale di uova di parassiti gastrointestinali in cinghiali (Sus scrofa e in mufloni (Ovis ammon di un’area mediterranea (Italia centrale. E' stata studiata l'emissione stagionale di uova (o oocisti di parassiti nelle feci di ungulati selvatici in una zona mediterranea protetta, il Parco dei Monti Livornesi (Livorno, Toscana, Italia Centrale. Per un anno sono stati raccolti mensilmente campioni di feci di Cinghiale (Sus scrofa e di Muflone (Ovis ammon. Gli andamenti osservati di emissione di uova sono stati analizzati tenendo conto delle variazioni di temperatura e piovosità stagionali, del ciclo biologico e della strategia di sopravvivenza dei parassiti, e delle condizioni sanitarie dell'ospite. E’ risultato che in una zona mediterranea come quella considerata i picchi di emissione di uova appaiono in mesi differenti in relazione alla biologia e alle strategie di sopravvivenza dei diversi parassiti.

  15. Influencia de la selecci??n de planta hospedadora, de los parasitoides y de la competencia intraespec??fica en el desarrollo y mortalidad de la procesionaria del pino (Thaumetopoea pityocampa)

    OpenAIRE

    P??rez-Contreras, Tom??s

    2004-01-01

    Se han estudiado diversos aspectos de la ecol??gia de la procesionaria del pino (Thaumetopoea pityocampa), un lepid??ptero heter??cero, de la familia Thaumetopoidaes, que constituye la principal plaga defoliadora de distintas especies de pino en el ??rea mediterranea. El trabajo de campo se realiz?? durante el per??odo 1993-1996, en un pinar de repoblaci??n compuesto por pino de Alepo (pinus halepensis) y pino mar??timo (pinus pinaster), localizado al este de la provincia de Granada. Debido a...

  16. Influencia de la selección de planta hospedadora, de los parasitoides y de la competencia intraespecífica en el desarrollo y mortalidad de la procesionaria del pino (Thaumetopoea pityocampa)

    OpenAIRE

    Pérez-Contreras, Tomás

    2013-01-01

    Se han estudiado diversos aspectos de la ecológia de la procesionaria del pino (Thaumetopoea pityocampa), un lepidóptero heterócero, de la familia Thaumetopoidaes, que constituye la principal plaga defoliadora de distintas especies de pino en el área mediterranea. El trabajo de campo se realizó durante el período 1993-1996, en un pinar de repoblación compuesto por pino de Alepo (pinus halepensis) y pino marítimo (pinus pinaster), localizado al este de la provincia de Granada. Debido a las dif...

  17. Parkinson disease and progressive supranuclear palsy: protein expression in skin.

    Science.gov (United States)

    Rodríguez-Leyva, Ildefonso; Chi-Ahumada, Erika G; Carrizales, Juan; Rodríguez-Violante, Mayela; Velázquez-Osuna, Salvador; Medina-Mier, Verónica; Martel-Gallegos, María G; Zarazúa, Sergio; Enríquez-Macías, Lourdes; Castro, Adriana; Calderón-Garcidueñas, Ana Laura; Jiménez-Capdeville, María E

    2016-03-01

    This study characterizes the expression of tau (p-tau) and α-synuclein (α-syn) by immunohistochemistry in the skin of three different populations: healthy control (HC), Parkinson disease (PD), and progressive supranuclear paralysis (PSP) subjects, with the purpose of finding a biomarker that could differentiate between subjects with PD and PSP. We evaluated the presence of p-tau and α-syn in a pilot study in the skin of three distinct groups of patients: 17 healthy subjects, 17 patients with PD, and 10 patients with PSP. Four millimeters punch biopsies were obtained from the occipital area and analyzed by immunohistochemistry using antibodies against α-syn and phosphorylated species of tau. PHF (paired helical filaments) antibody identifies p-tau in both normal and pathological conditions and AT8 recognizes p-tau characteristic of pathological conditions. Differences between the three groups were assessed by quantification of immunopositive areas in the epidermis. The immunopositivity pattern of p-tau and α-syn was significantly different among the three groups. Healthy subjects showed minimal staining using AT8 and α-syn. The PD group showed significantly higher α-syn and AT8 immunopositivity, while the PSP group only expressed higher AT8 immunopositivity than HCs. These data suggest that the skin reflects brain pathology. Therefore, immunohistochemical analysis of p-tau and α-syn in the skin can be useful for further characterization of PD and PSP.

  18. Propagated but Topologically Distributed Forebrain Neurons Expressing Alpha-Synuclein in Aged Macaques.

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    Katsuo Kimura

    Full Text Available In neurodegenerative disorders, such as Parkinson's disease (PD, alpha-synuclein (α-syn accumulates to induce cell death and/or form a cytoplasmic inclusion called Lewy body (LB. This α-syn-related pathology is termed synucleinopathy. It remains unclear how α-syn accumulation expands during the progress of synucleinopathy in the human brain. In our study, we investigated the patterns of distribution and propagation of forebrain neurons expressing α-syn in aged macaques. It was found that the occurrence of α-syn-positive neurons proceeded topologically based on the midbrain dopamine pathways arising from the substantia nigra and the ventral tegmental area where they were primarily observed. In the nigrostriatal or mesolimbic dopamine pathway, the age-dependent increase in α-syn-positive neurons was evident in the striatum or the nucleus accumbens, respectively. Concerning the nigrostriatal pathway, a mediolateral or rostrocaudal gradient was seen in the substantia nigra or the striatum, respectively, and a compensatory increase in dopamine transporter occurred in the striatum regardless of the decreased dopamine level. In the mesocortical dopamine pathway, α-syn-positive neurons appeared in the prefrontal and then motor areas of the frontal lobe. Given that neither LB formation nor clinical phenotype manifestation was detected in any of the monkeys examined in the present study, aged macaques may be useful as a potential presymptomatic model for PD and LB-related neuropsychiatric disorders.

  19. Novel animal model defines genetic contributions for neuron-to-neuron transfer of α-synuclein.

    Science.gov (United States)

    Tyson, Trevor; Senchuk, Megan; Cooper, Jason F; George, Sonia; Van Raamsdonk, Jeremy M; Brundin, Patrik

    2017-08-08

    Cell-to-cell spreading of misfolded α-synuclein (α-syn) is suggested to contribute to the progression of neuropathology in Parkinson's disease (PD). Compelling evidence supports the hypothesis that misfolded α-syn transmits from neuron-to-neuron and seeds aggregation of the protein in the recipient cells. Furthermore, α-syn frequently appears to propagate in the brains of PD patients following a stereotypic pattern consistent with progressive spreading along anatomical pathways. We have generated a C. elegans model that mirrors this progression and allows us to monitor α-syn neuron-to-neuron transmission in a live animal over its lifespan. We found that modulation of autophagy or exo/endocytosis, affects α-syn transfer. Furthermore, we demonstrate that silencing C. elegans orthologs of PD-related genes also increases the accumulation of α-syn. This novel worm model is ideal for screening molecules and genes to identify those that modulate prion-like spreading of α-syn in order to target novel strategies for disease modification in PD and other synucleinopathies.

  20. Validation of α-Synuclein as a CSF Biomarker for Sporadic Creutzfeldt-Jakob Disease.

    Science.gov (United States)

    Llorens, Franc; Kruse, Niels; Karch, André; Schmitz, Matthias; Zafar, Saima; Gotzmann, Nadine; Sun, Ting; Köchy, Silja; Knipper, Tobias; Cramm, Maria; Golanska, Ewa; Sikorska, Beata; Liberski, Pawel P; Sánchez-Valle, Raquel; Fischer, Andre; Mollenhauer, Brit; Zerr, Inga

    2018-03-01

    The analysis of cerebrospinal fluid (CSF) biomarkers gains importance in the differential diagnosis of prion diseases. However, no single diagnostic tool or combination of them can unequivocally confirm prion disease diagnosis. Electrochemiluminescence (ECL)-based immunoassays have demonstrated to achieve high diagnostic accuracy in a variety of sample types due to their high sensitivity and dynamic range. Quantification of CSF α-synuclein (a-syn) by an in-house ECL-based ELISA assay has been recently reported as an excellent approach for the diagnosis of sporadic Creutzfeldt-Jakob disease (sCJD), the most prevalent form of human prion disease. In the present study, we validated a commercially available ECL-based a-syn ELISA platform as a diagnostic test for correct classification of sCJD cases. CSF a-syn was analysed in 203 sCJD cases with definite diagnosis and in 445 non-CJD cases. We investigated reproducibility and stability of CSF a-syn and made recommendations for its analysis in the sCJD diagnostic workup. A sensitivity of 98% and a specificity of 97% were achieved when using an optimal cut-off of 820 pg/mL a-syn. Moreover, we were able to show a negative correlation between a-syn levels and disease duration suggesting that CSF a-syn may be a good prognostic marker for sCJD patients. The present study validates the use of a-syn as a CSF biomarker of sCJD and establishes the clinical and pre-analytical parameters for its use in differential diagnosis in clinical routine. Additionally, the current test presents some advantages compared to other diagnostic approaches: it is fast, economic, requires minimal amount of CSF and a-syn levels are stable along disease progression.

  1. Revision of the Agrilus adonis species-group (Coleoptera: Buprestidae: Agrilini with description of sixteen new species from southeastern Asia

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    Eduard Jendek

    2015-02-01

    Full Text Available The newly defined Agrilus adonis species-group comprising thirty taxa from Southeast Asia is revised based on the examination of type specimens. The taxonomic concept and distribution of all known taxa is reexamined for the first time since they were described. The complete commented bibliographic data are given for each name. The key to species is provided and complemented with illustration of habitus and genitalia. Images of all primary types are also included. The distribution of selected species is shown on maps. The following sixteen new species are described: Agrilus acrobeles sp. nov.; A. bunsu sp. nov.; A. cechovskyi sp. nov.; A. curiosus sp. nov.; A. garo sp. nov.; A. iban sp. nov.; A. jakli sp. nov.; A. kuchingi sp. nov.; A. lembik sp. nov.; A. meratus sp. nov.; A. orangulu sp. nov.; A. serratus sp. nov.; A. strbai sp. nov.; A. upsilon sp. nov.; A. vir sp. nov. and A. xiphos sp. nov.. The name emeritus Descarpentries & Villiers, 1963 is removed from the synonymy of Agrilus perlisensis Fisher 1936 and revalidated as the name for species A. emeritus Descarpentries & Villiers, 1963. Nine new synonyms are proposed: Agrilus adonis Deyrolle, 1864 (= A. perlisensis Fisher, 1936 syn. nov. = A. testor Kerremnas, 1900 syn. nov.; A. emeritus Descarpentries & Villiers, 1963 (= A. deuvei Baudon, 1965 syn. nov. = A. souvannavongsi Baudon, 1968 syn. nov.; A. famulus Kerremans, 1900 (= A. convergens Fisher, 1930 syn. nov. = A. japanensis Obenberger, 1935 syn. nov.; A. insularis Deyrolle, 1864 (= A. nigrocyaneus Deyrolle, 1864 syn. nov. = A. falsulus Obenberger, 1924 syn. nov.; A. malasicus Fisher, 1930 (=A. bettotanus Fisher, 1930 syn. nov.. Some of those names were already treated as invalid ones but in the synonymy of different species. Their taxonomic history is recognizable from commented references cited at each name.

  2. Age- and brain region-dependent α-synuclein oligomerization is attributed to alterations in intrinsic enzymes regulating α-synuclein phosphorylation in aging monkey brains.

    Science.gov (United States)

    Chen, Min; Yang, Weiwei; Li, Xin; Li, Xuran; Wang, Peng; Yue, Feng; Yang, Hui; Chan, Piu; Yu, Shun

    2016-02-23

    We previously reported that the levels of α-syn oligomers, which play pivotal pathogenic roles in age-related Parkinson's disease (PD) and dementia with Lewy bodies, increase heterogeneously in the aging brain. Here, we show that exogenous α-syn incubated with brain extracts from older cynomolgus monkeys and in Lewy body pathology (LBP)-susceptible brain regions (striatum and hippocampus) forms higher amounts of phosphorylated and oligomeric α-syn than that in extracts from younger monkeys and LBP-insusceptible brain regions (cerebellum and occipital cortex). The increased α-syn phosphorylation and oligomerization in the brain extracts from older monkeys and in LBP-susceptible brain regions were associated with higher levels of polo-like kinase 2 (PLK2), an enzyme promoting α-syn phosphorylation, and lower activity of protein phosphatase 2A (PP2A), an enzyme inhibiting α-syn phosphorylation, in these brain extracts. Further, the extent of the age- and brain-dependent increase in α-syn phosphorylation and oligomerization was reduced by inhibition of PLK2 and activation of PP2A. Inversely, phosphorylated α-syn oligomers reduced the activity of PP2A and showed potent cytotoxicity. In addition, the activity of GCase and the levels of ceramide, a product of GCase shown to activate PP2A, were lower in brain extracts from older monkeys and in LBP-susceptible brain regions. Our results suggest a role for altered intrinsic metabolic enzymes in age- and brain region-dependent α-syn oligomerization in aging brains.

  3. α-Synuclein fibril-induced paradoxical structural and functional defects in hippocampal neurons.

    Science.gov (United States)

    Froula, Jessica M; Henderson, Benjamin W; Gonzalez, Jose Carlos; Vaden, Jada H; Mclean, John W; Wu, Yumei; Banumurthy, Gokulakrishna; Overstreet-Wadiche, Linda; Herskowitz, Jeremy H; Volpicelli-Daley, Laura A

    2018-05-01

    Neuronal inclusions composed of α-synuclein (α-syn) characterize Parkinson's Disease (PD) and Dementia with Lewy bodies (DLB). Cognitive dysfunction defines DLB, and up to 80% of PD patients develop dementia. α-Syn inclusions are abundant in the hippocampus, yet functional consequences are unclear. To determine if pathologic α-syn causes neuronal defects, we induced endogenous α-syn to form inclusions resembling those found in diseased brains by treating hippocampal neurons with α-syn fibrils. At seven days after adding fibrils, α-syn inclusions are abundant in axons, but there is no cell death at this time point, allowing us to assess for potential alterations in neuronal function that are not caused by neuron death. We found that exposure of neurons to fibrils caused a significant reduction in mushroom spine densities, adding to the growing body of literature showing that altered spine morphology is a major pathologic phenotype in synucleinopathies. The reduction in spine densities occurred only in wild type neurons and not in neurons from α-syn knockout mice, suggesting that the changes in spine morphology result from fibril-induced corruption of endogenously expressed α-syn. Paradoxically, reduced postsynaptic spine density was accompanied by increased frequency of miniature excitatory postsynaptic currents (EPSCs) and presynaptic docked vesicles, suggesting enhanced presynaptic function. Action-potential dependent activity was unchanged, suggesting compensatory mechanisms responding to synaptic defects. Although activity at the level of the synapse was unchanged, neurons exposed to α-syn fibrils, showed reduced frequency and amplitudes of spontaneous Ca 2+ transients. These findings open areas of research to determine the mechanisms that alter neuronal function in brain regions critical for cognition at time points before neuron death.

  4. Specific pesticide-dependent increases in α-synuclein levels in human neuroblastoma (SH-SY5Y) and melanoma (SK-MEL-2) cell lines.

    Science.gov (United States)

    Chorfa, Areski; Bétemps, Dominique; Morignat, Eric; Lazizzera, Corinne; Hogeveen, Kevin; Andrieu, Thibault; Baron, Thierry

    2013-06-01

    Epidemiological studies indicate a role of genetic and environmental factors in Parkinson's disease involving alterations of the neuronal α-synuclein (α-syn) protein. In particular, a relationship between Parkinson's disease and occupational exposure to pesticides has been repeatedly suggested. Our objective was to precisely assess changes in α-syn levels in human neuroblastoma (SH-SY5Y) and melanoma (SK-MEL-2) cell lines following acute exposure to pesticides (rotenone, paraquat, maneb, and glyphosate) using Western blot and flow cytometry. These human cell lines express α-syn endogenously, and overexpression of α-syn (wild type or mutated A53T) can be obtained following recombinant adenoviral transduction. We found that endogenous α-syn levels in the SH-SY5Y neuroblastoma cell line were markedly increased by paraquat, and to a lesser extent by rotenone and maneb, but not by glyphosate. Rotenone also clearly increased endogenous α-syn levels in the SK-MEL-2 melanoma cell line. In the SH-SY5Y cell line, similar differences were observed in the α-syn adenovirus-transduced cells, with a higher increase of the A53T mutated protein. Paraquat markedly increased α-syn in the SK-MEL-2 adenovirus-transduced cell line, similarly for the wild-type or A53T proteins. The observed differences in the propensities of pesticides to increase α-syn levels are in agreement with numerous reports that indicate a potential role of exposure to certain pesticides in the development of Parkinson's disease. Our data support the hypothesis that pesticides can trigger some molecular events involved in this disease and also in malignant melanoma that consistently shows a significant but still unexplained association with Parkinson's disease.

  5. Dynamical Behavior of Human α-Synuclein Studied by Quasielastic Neutron Scattering.

    Directory of Open Access Journals (Sweden)

    Satoru Fujiwara

    Full Text Available α-synuclein (αSyn is a protein consisting of 140 amino acid residues and is abundant in the presynaptic nerve terminals in the brain. Although its precise function is unknown, the filamentous aggregates (amyloid fibrils of αSyn have been shown to be involved in the pathogenesis of Parkinson's disease, which is a progressive neurodegenerative disorder. To understand the pathogenesis mechanism of this disease, the mechanism of the amyloid fibril formation of αSyn must be elucidated. Purified αSyn from bacterial expression is monomeric but intrinsically disordered in solution and forms amyloid fibrils under various conditions. As a first step toward elucidating the mechanism of the fibril formation of αSyn, we investigated dynamical behavior of the purified αSyn in the monomeric state and the fibril state using quasielastic neutron scattering (QENS. We prepared the solution sample of 9.5 mg/ml purified αSyn, and that of 46 mg/ml αSyn in the fibril state, both at pD 7.4 in D2O. The QENS experiments on these samples were performed using the near-backscattering spectrometer, BL02 (DNA, at the Materials and Life Science Facility at the Japan Accelerator Research Complex, Japan. Analysis of the QENS spectra obtained shows that diffusive global motions are observed in the monomeric state but largely suppressed in the fibril state. However, the amplitude of the side chain motion is shown to be larger in the fibril state than in the monomeric state. This implies that significant solvent space exists within the fibrils, which is attributed to the αSyn molecules within the fibrils having a distribution of conformations. The larger amplitude of the side chain motion in the fibril state than in the monomeric state implies that the fibril state is entropically favorable.

  6. An Overview on the Role of α -Synuclein in Experimental Models of Parkinson's Disease from Pathogenesis to Therapeutics.

    Science.gov (United States)

    Javed, Hayate; Kamal, Mohammad Amjad; Ojha, Shreesh

    2016-01-01

    Parkinson's disease (PD) is a devastating and progressive movement disorder characterized by symptoms of muscles rigidity, tremor, postural instability and slow physical movements. Biochemically, PD is characterized by lack of dopamine production and its action due to loss of dopaminergic neurons and neuropathologically by the presence of intracytoplasmic inclusions known as Lewy bodies, which mainly consist of presynaptic neuronal protein, α-synuclein (α-syn). It is believed that alteration in α-syn homeostasis leads to increased accumulation and aggregation of α-syn in Lewy body. Based on the important role of α-syn from pathogenesis to therapeutics, the recent researches are mainly focused on deciphering the critical role of α-syn at advanced level. Being a major protein in Lewy body that has a key role in pathogenesis of PD, several model systems including immortalized cell lines (SH-SY5Y), primary neuronal cultures, yeast (saccharomyces cerevisiae), drosophila (fruit flies), nematodes (Caenorhabditis elegans) and rodents are being employed to understand the PD pathogenesis and treatment. In order to study the etiopathogensis and develop novel therapeutic target for α -syn aggregation, majority of investigators rely on toxin (rotenone, 1-Methyl-4-Phenyl-1,2,3,6-Tetrahydropyridine, 6-hydroxydopamine, paraquat)-induced animal models of PD as a tool for basic research. Whereas, cell and tissue based models are mostly utilized to elucidate the mechanistic and molecular pathways underlying the α -syn induced toxicity and therapeutic approaches in PD. Gene modified mouse models based on α-syn expression are fascinating for modeling familial PD and toxin induced models provide a suitable approach for sporadic PD. The purpose of this review is to provide a summary and a critical review of the involvement of α-syn in various in vitro and in vivo models of PD based on use of neurotoxins as well as genetic modifications.

  7. The genus Alphitobius Stephens (Coleoptera, Tenebrionidae, Alphitobiini in Africa and adjacent islands

    Directory of Open Access Journals (Sweden)

    Wolfgang Schawaller

    2014-06-01

    Full Text Available All species of the genus Alphitobius Stephens, 1829 (Alphitobiini Reitter, 1917, subfamily Tenebrioninae Latreille, 1802 from Africa and adjacent islands are revised. New species: Alphitobius capitaneus sp. n. from Kenya. New synonyms: Cryptops ulomoides Solier, 1851, syn. n. of Alphitobius diaperinus (Panzer, 1796; Alphitobius rufus Ardoin, 1976, syn. n. of Alphitobius hobohmi Koch, 1953; Peltoides (Micropeltoides crypticoides Pic, 1916, syn. n. of Peltoides (Micropeltoides opacus (Gerstaecker, 1871, comb. n. Homonym: Alphitobius ulomoides Koch, 1953 = Alphitobius arnoldi nom. n. New combinations from Alphitobius: Ulomoides basilewskyi (Ardoin, 1969, comb. n.; Peltoides (Micropeltoides opacus (Gerstaecker, 1871, comb. n. Figures of all examined species are added and a species key is compiled.

  8. Molecular Biogeochemistry of Modern and Ancient Marine Microbes

    Science.gov (United States)

    2010-02-01

    jahnii AF163148 Isochrysis sp. AB183617 Emiliania huxleyi M87327 Chrysochromulina campanulifera AJ246273 Chrysochromulina throndsenii AJ246277... Emiliania huxleyi Skeletonema costatum hotChlE9, syn-A hotChlC1, med4-B hotChlD9, med4-B hotChlD12, med4-B hotChlE5, syn-A hotChlE4, syn-A hotChlA9, med4...straight-chain C37- C39 methyl and ethyl ketones in marine sediments and a coccolithophore Emiliania huxleyi . Advances in Organic Geochemistry 1979

  9. SU-G-JeP2-06: Dosimetric and Workflow Evaluation of First Commercial Synthetic CT Software for Clinical Use in Pelvis

    Energy Technology Data Exchange (ETDEWEB)

    Tyagi, N; Zhang, J; Happersett, L; Kadbi, M; Mechalakos, J; Deasy, J; Hunt, M [Memorial Sloan Kettering Cancer Center, New York, NY (United States)

    2016-06-15

    Purpose: evaluate a commercial synthetic CT (syn-CT) software for use in prostate radiotherapy Methods: Twenty prostate patients underwent CT and MR simulation scans in treatment position on a 3T Philips scanner. The MR protocol consisted of a T2w turbo spin-echo for soft tissue contrast, a 2D balanced-fast field echo (b-FFE) for fiducial identification, a dual-echo 3D FFE B0 map for distortion analysis and a 3D mDIXON FFE sequence to generate syn-CT. Two echoes are acquired during mDIXON scan, allowing water, fat, and in-phase images to be derived using the frequency shift of the fat and water protons. Tissues were classified as: air, adipose, water, trabecular/spongy bone and compact/cortical bone and assigned specific bulk HU values. Bone structures are segmented based on a pelvis bone atlas. Accuracy of syn-CT for patient treatment planning was analyzed by transferring the original plan and structures from the CT to syn-CT via rigid registration and recalculating dose. In addition, new IMRT plans were generated on the syn-CT using structures contoured on MR and transferred to the syn-CT. Accuracy of fiducial-based localization at the treatment machine performed using syn-CT or DRRs generated from syn-CT was assessed by comparing to orthogonal kV radiographs or CBCT. Results: Dosimetric comparison between CT and syn-CT was within 0.5% for all structures. The de-novo optimized plans generated on the syn-CT met our institutional clinical objectives for target and normal structures. Patient-induced susceptibility distortion based on B0 maps was within 1mm and 0.4 mm in the body and prostate. The rectal and bladder outlines on the syn-CT were deemed sufficient for assessing rectal and bladder filling on the CBCT at the time of treatment. CBCT localization showed a median error of < ±1 mm in LR, AP and SI direction. Conclusion: MRI derived syn-CT can be used clinically in MR-alone planning and treatment process for prostate. Drs. Deasy, Hunt and Tyagi have Master

  10. A review of the Palaearctic species of Larinus Dejean (Coleoptera: Curculionidae in C. J. Schoenherr collection: nomenclature and lectotype designations

    Directory of Open Access Journals (Sweden)

    Levent Gültekin

    2015-06-01

    Full Text Available The syntypes of 41 species of Larinus Dejean described by L. Gyllenhal and C. H. Boheman, housed at the C. J. Schoenherr collection in the Swedish Museum of Natural History, Stockholm and the Museum of Evolution, Uppsala University, are examined. Lectotypes are designated, a nomenclatural review performed, many previous synonyms confirmed and three new synonyms proposed: Larinus planus (Fabricius, 1792 (= Larinus rusticanus Gyllenhal, 1835 syn. nov.; Larinus carlinae (Olivier, 1807 (= Larinus sulphurifer Boheman, 1843 syn. nov.; Larinus minutus Gyllenhal, 1835 (= Larinus puncticollis Capiomont, 1874 syn. nov.. Colour images for 15 lectotypes are presented.

  11. Alpha-Synuclein: From Early Synaptic Dysfunction to Neurodegeneration

    Directory of Open Access Journals (Sweden)

    Veronica Ghiglieri

    2018-05-01

    Full Text Available Over the last two decades, many experimental and clinical studies have provided solid evidence that alpha-synuclein (α-syn, a small, natively unfolded protein, is closely related to Parkinson’s disease (PD pathology. To provide an overview on the different roles of this protein, here we propose a synopsis of seminal and recent studies that explored the many aspects of α-syn. Ranging from the physiological functions to its neurodegenerative potential, the relationship with the possible pathogenesis of PD will be discussed. Close attention will be paid on early cellular and molecular alterations associated with the presence of α-syn aggregates.

  12. Lepidoptera

    DEFF Research Database (Denmark)

    Aguiar, António M. Franquinho; Karsholt, Ole

    2009-01-01

      Being the first of a series dealing with the entomofauna of the Madeira and Selvagens Islands, this catalogue is a list of all Lepidoptera recorded from this region of Macaronesia, with references to the relevant literature. The checklist includes 37 families, 211 genera and 331 species. 31 spe....... maderensis ssp. maderensis (Bethune-Baker, 1891) (n. syn). Agrotis selvagensis Pinker & Bacallado, 1978 is a synonym of A. lanzarotensis Rebel, 1894 (n. syn) and Agrotis trux spp. maderensis Pinker, 1971 is a synonym of A. trux ssp. trux (Hübner, 1824) (n. syn.)....

  13. Inducible alpha-synuclein overexpression affects human Neural Stem Cells behavior

    OpenAIRE

    Conti, Luciano; Zasso, Jacopo; Cutarelli, Alessandro; Ahmed, Mastad

    2018-01-01

    Converging evidence suggest that levels of alpha-Synuclein (aSyn) expression play a critical role in Parkinson's disease (PD). Several mutations of the SNCA gene, encoding for aSyn have been associated to either the familial or the sporadic forms of PD. Nonetheless, the mechanism underlying wild type aSyn-mediated neurotoxicity in neuronal cells as well as its specific driving role in PD pathogenesis has yet to be fully clarified. In this view, the development of proper in vitro cellular syst...

  14. The Metabolic Syndrome and Behavioral Correlates in Obese Patients With Binge Eating Disorder

    OpenAIRE

    Roehrig, Megan; Masheb, Robin M.; White, Marney A.; Grilo, Carlos M.

    2008-01-01

    This study examined the frequency of the metabolic syndrome (MetSyn) and explored behavioral eating- and weight-related correlates in obese patients with binge eating disorder (BED). Ninety-three treatment-seeking obese BED patients (22 men and 71 women) with and without the MetSyn were compared on demographic features and a number of current and historical eating and weight variables. Sixty percent of the obese patients with BED met criteria for the MetSyn, with men and whites having signifi...

  15. Why close a bacterial genome? The plasmid of Alteromonas macleodii HOT1A3 is a vector for inter-specific transfer of a flexible genomic island

    Directory of Open Access Journals (Sweden)

    Eduard eFadeev

    2016-03-01

    Full Text Available Genome sequencing is rapidly becoming a staple technique in environmental and clinical microbiology, yet computational challenges still remain, leading to many draft genomes which are typically fragmented into many contigs. We sequenced and completely assembled the genome of a marine heterotrophic bacterium, Alteromonas macleodii HOT1A3, and compared its full genome to several draft genomes obtained using different reference-based and de-novo methods. In general, the de-novo assemblies clearly outperformed the reference-based or hybrid ones, covering>99% of the genes and representing essentially all of the gene functions. However, only the fully closed genome (~4.5Mbp allowed us to identify the presence of a large, 148 kbp plasmid, pAM1A3. While HOT1A3 belongs to Alteromonas macleodii, typically found in surface waters (surface ecotype, this plasmid consists of an almost complete flexible genomic island, containing many genes involved in metal resistance previously identified in the genomes of Alteromonas mediterranea (deep ecotype. Indeed, similar to A. mediterranea, A. macleodii HOT1A3 grows at concentrations of zinc, mercury and copper that are inhibitory for other A. macleodii strains. The presence of a plasmid encoding almost an entire flexible genomic island suggests that wholesale genomic exchange between heterotrophic marine bacteria belonging to related but ecologically different populations is not uncommon.

  16. Dissecting the function of Cullin-RING ubiquitin ligase complex genes in planarian regeneration.

    Science.gov (United States)

    Strand, Nicholas S; Allen, John M; Ghulam, Mahjoobah; Taylor, Matthew R; Munday, Roma K; Carrillo, Melissa; Movsesyan, Artem; Zayas, Ricardo M

    2018-01-15

    The ubiquitin system plays a role in nearly every aspect of eukaryotic cell biology. The enzymes responsible for transferring ubiquitin onto specific substrates are the E3 ubiquitin ligases, a large and diverse family of proteins, for which biological roles and target substrates remain largely undefined. Studies using model organisms indicate that ubiquitin signaling mediates key steps in developmental processes and tissue regeneration. Here, we used the freshwater planarian, Schmidtea mediterranea, to investigate the role of Cullin-RING ubiquitin ligase (CRL) complexes in stem cell regulation during regeneration. We identified six S. mediterranea cullin genes, and used RNAi to uncover roles for homologs of Cullin-1, -3 and -4 in planarian regeneration. The cullin-1 RNAi phenotype included defects in blastema formation, organ regeneration, lesions, and lysis. To further investigate the function of cullin-1-mediated cellular processes in planarians, we examined genes encoding the adaptor protein Skp1 and F-box substrate-recognition proteins that are predicted to partner with Cullin-1. RNAi against skp1 resulted in phenotypes similar to cullin-1 RNAi, and an RNAi screen of the F-box genes identified 19 genes that recapitulated aspects of cullin-1 RNAi, including ones that in mammals are involved in stem cell regulation and cancer biology. Our data provides evidence that CRLs play discrete roles in regenerative processes and provide a platform to investigate how CRLs regulate stem cells in vivo. Copyright © 2017 Elsevier Inc. All rights reserved.

  17. Radiobiological and radioecological studies with the unicellular marine algae Acetabularia, Batophora and Dunaliella

    International Nuclear Information System (INIS)

    Bonotto, S.; Luttke, A.; Strack, S.; Kirchmann, R.; Hoursiangou, D.; Puiseux-Dao, S.

    1980-01-01

    The biological effects of X-rays on the unicellular marine algae Acetabularia mediterranea, Acetabularia peniculus and Batophora oerstedii were studied. Increasing doses of X-rays (0 to 150 kr) were shown to interfere with the main morphogenetic processes of these algae. Labelling experiments with 3 H-thymidine, 3 H-uridine and 3 H-leucine showed that X-rays (50 kr) provoked a strong reduction of DNA, RNA and protein synthesis in the chloroplasts of A. mediterranea. Radioecological studies were also performed showing that Acetabularia cells, grown in the presence of HTO, incorporate a significant amount of 3 H in the total nucleic acid and protein fraction. However, 3 H supplied to Acetabularia in the form of tritiated water was not accumulated. When organically bound 3 H was supplied to Acetabularia or to Dunaliella, a selective accumulation of some substances was observed. Thus the results of this study illustrate the impact of radiation on living organisms and the biological behaviour of 3 H in the aquatic system. (UK)

  18. AUTHOR INDEX

    Indian Academy of Sciences (India)

    Comparative studies of chemically syn- thesized and RF .... Colloidal transparent conducting oxide nanocrystals: A new ... cal and magnetic properties of semiconductor nanocrystals ... positron–ion–dust plasmas with dust-size distribution ...

  19. Genomics and the making of yeast biodiversity

    NARCIS (Netherlands)

    Hittinger, Chris Todd; Rokas, Antonis; Bai, Feng-Yan; Boekhout, Teun; Gonçalves, Paula; Jeffries, Thomas W; Kominek, Jacek; Lachance, Marc-André; Libkind, Diego; Rosa, Carlos A; Sampaio, José Paulo; Kurtzman, Cletus P

    2015-01-01

    Yeasts are unicellular fungi that do not form fruiting bodies. Although the yeast lifestyle has evolved multiple times, most known species belong to the subphylum Saccharomycotina (syn. Hemiascomycota, hereafter yeasts). This diverse group includes the premier eukaryotic model system, Saccharomyces

  20. Tandem base-free synthesis of β-hydroxy sulphides under ...

    Indian Academy of Sciences (India)

    aCollege of Chemistry and Materials Engineering, Wenzhou University, Wenzhou 325035, P. R. China. bWenzhou ... tion of building blocks and target molecules.1 On the other hand ... consequence, development of new methods for the syn-.

  1. NJP VOLUME 42 NO 1

    African Journals Online (AJOL)

    PROF. EZECHUKWU

    2014-11-04

    Nov 4, 2014 ... acquired pneumonia (CAP), defined as pneumonia in a previously healthy .... a longer course, de- pending on the aetiologic pathogen, promptness and ... between the features of pneumonia and acute chest syn- drome21.

  2. Production of extracellular lipase by a new strain Staphylococcus ...

    African Journals Online (AJOL)

    SAM

    2014-07-09

    Jul 9, 2014 ... mesophilic and solvent tolerant lipase with industrial potential. Key words: ..... amount of enzyme production indicating the inducible nature of the .... biodiesel production, oleochemical industry, polymer syn- thesis and ...

  3. Tool position tracking control of a nonlinear uncertain flexible robot ...

    Indian Academy of Sciences (India)

    Robot manipulators have become progressively important in the field of flexible ... this research, tracking of tool position and minimization of motor torque are ...... and Menhaj M B 2013a Position and current control of a permanent-magnet syn-.

  4. White blister rusts and downy mildews from bajaur agency fata, with some new records from pakistan

    International Nuclear Information System (INIS)

    Haq, M.A.; Shahzad, S.

    2015-01-01

    In a species diversity study of Oomycyctes of Bajaur Agency FATA, Pakistan, infection of white blister rusts and downy mildews recorded on three cultivated and four wild plants. Capsella bursa-pastoris showed mixed infection of Albugo candida and Hyaloperonospora parasitica (syn: Peronospora parasitica). Similarly, A. candida and H. brassicae (syn: P. brassicae) parasitized Brassica campestris. Wilsoniana portulacae (syn: Albugo portulacae) and W. occidentalis com. nov. (syn: Albugo occidentalis) recovered from Portulaca oleracea and Spinacia oleracea, respectively. Bremia taraxaci, B. sonchicola and B. saussureae recorded on Taraxicum officinale, Sonchus sp., and Saussurea sp., respectively. All these obligate parasites are new records from Bajaur Agency, while H. parasitica, W. occidentalis, B. taraxaci, and B. saussureae on the mentioned hosts are new records from Pakistan. (author)

  5. Implementation of anomaly detection algorithms for detecting transmission control protocol synchronized flooding attacks

    CSIR Research Space (South Africa)

    Mkuzangwe, NNP

    2015-08-01

    Full Text Available This work implements two anomaly detection algorithms for detecting Transmission Control Protocol Synchronized (TCP SYN) flooding attack. The two algorithms are an adaptive threshold algorithm and a cumulative sum (CUSUM) based algorithm...

  6. Characterization of duck (Anas platyrhynchos) MHC class Igene in ...

    Indian Academy of Sciences (India)

    LIN ZHANG

    2017-06-17

    Jun 17, 2017 ... from Weishan Ma duck and Cherry Valley duck were cloned, and their characterization were investigated. The overall ... Then the first-strand cDNAs were syn- thesized ... opment, Tokyo, Japan) and DNAMAN demo software.

  7. Optimal Shockwave Boundary Layer Interaction Control for Supersonic Mixed Compression Inlets, Phase I

    Data.gov (United States)

    National Aeronautics and Space Administration — SynGenics Corporation proposes a program that incorporates systems engineering processes, Response Surface Methods, and state-of-the-art numerical methods to develop...

  8. Influence of greenhouse climate and plant density on external quality of chrysanthemum (Dendranthema grandiflorum (Ramat.)Kitamura) : First steps towards a quality model

    NARCIS (Netherlands)

    Carvalho, S.M.P.; Heuvelink, E.

    2001-01-01

    The effects of greenhouse climate and plant density on external quality of chrysanthemum (Dendranthema grandiflorum syn. Chrysanthemum morifolium) are reviewed. The external quality aspects analysed in this paper are stem morphology (length, diameter and "strength"), leaf morphology (number and

  9. dimensional architectures via hydrogen bonds

    Indian Academy of Sciences (India)

    Administrator

    organization and has potential applications in the field of magnetism ... The concepts of crystal engineering ... 4. However, the utilization of hydrogen bond supramolecular syn- ... sembling the coordination networks by designing the ligands ...

  10. Anti-nociceptive activity of Hygrophila auriculata (Schum) Heine ...

    African Journals Online (AJOL)

    Hygrophila auriculata (Schum) Heine (syn) Asteracantha longifolia Nees, Acanthaceae was described in ayurvedic literature as Ikshura, Ikshugandha, and Kokilasha. The plant was extensively used in traditional system of medicine for various ailments like rheumatism, inflammation, jaundice, hepatic obstruction, pain, etc.

  11. GenBank blastx search result: AK107763 [KOME

    Lifescience Database Archive (English)

    Full Text Available isease and variant metachromatic leukodystrophy) variant, clone: SYN03435.|PRI PRI 3e-11 +3 ... ...AK107763 002-133-A11 AK223290.1 Homo sapiens mRNA for prosaposin (variant Gaucher d

  12. Educational Corner

    African Journals Online (AJOL)

    Mohammad Saad Zaghloul Salem

    2012-02-04

    Feb 4, 2012 ... Received 12 June 2010; accepted 13 July 2010. Available online 4 ..... Fibroblast growth factor receptor mutations cause all of the following ... D. Zellweger syndrome ... Which of the following statements about DiGeorge syn-.

  13. Applications of natural products in the control of mosquito ...

    African Journals Online (AJOL)

    STORAGESEVER

    2009-12-29

    Dec 29, 2009 ... part of disease prevention strategies, many regions of the world are still struggling .... Although new syn- thetic chemicals have not yet impacted the market, there are a number of chemicals available to target mosquito larvae ...

  14. An Exonic Insertion Encodes an Alanine Stretch in Porcine Synapsin I

    DEFF Research Database (Denmark)

    Hedegaard, Claus; Bendixen, Emøke; Jensen, Poul Henning

    2009-01-01

    regulatory roles in linking the vesicles to the cytoskeleton, supported by the identified abilities of the syns to bind both phospholipids (Schiebler et al. 1986 ) and tubulin/actin (Baines and Bennett 1986 ; Bähler and Greengard 1987 ). Originating from an alternatively spliced common transcript, syn Ia...... experiments, a nonsense mutation leading to a truncated form of syn I, without domain D and E/F, was identified in a family with frequent cases of X-linked epilepsy (Garcia et al. 2004 ). This study reports molecular cloning and characterization of the coding sequence of the porcine ortholog of syn I......, including identification and verification at the protein level of an alanine-encoding insert...

  15. Rhantus fengi sp. n. from Xizang, China, and notes on Laccoporus nigritulus (Gschwendtner (Coleoptera, Dytiscidae

    Directory of Open Access Journals (Sweden)

    Shuang Zhao

    2011-05-01

    Full Text Available Rhantus fengi sp. n. from Mount Sejila, Xizang, China is described and illustrated. Laccoporus nigritulus (Gschwendtner, 1936 is redescribed and illustrated; Laccoporus viator Balfour-Browne, 1939, syn. n. is established as its junior subjective synonym.

  16. QTL list: [PGDBj Registered plant list, Marker list, QTL list, Plant DB link and Genome analysis methods[Archive

    Lifescience Database Archive (English)

    Full Text Available thesis 4 pW125dE LG_03 ... 46 3.3 ... 10.1371/journal.pone.0091428 24614913 ... QT84689 Brassica oleracea Brassicaceae ... Flower buds_Aliphatic glucosinolates (Aliphatic ) Glucosinolate Syn

  17. Partamona nigrilabris Pedro & Camargo, 2003, um novo sinônimo de P. nigrior (Cockerell, 1925 (Hymenoptera, Apidae Partamona nigrilabris Pedro & Camargo, 2003, a new synonym of P. nigrior (Cockerell, 1925 (Hymenoptera, Apidae

    Directory of Open Access Journals (Sweden)

    João M. F. Camargo

    2003-01-01

    Full Text Available P. nigrilabris was described based on specimens wrongly labelled as from "Salvador-BA, Brasil". It is considered as a new synonym: Partamona nigrior (Cockerell, 1925 = P. nigrilabris Pedro & Camargo, 2003, syn. nov.

  18. The epidemiology of sudden oak death in Oregon forests

    Science.gov (United States)

    Ebba K. Peterson

    2011-01-01

    The phytopathogen Phytophthora ramorum (Werres, DeCock & Man in't Veld), causal agent of Sudden Oak Death (SOD) of oaks (Quercus spp.) and tanoaks (Notholithocarpus densiflorus syn. Lithocarpus densiflorus...

  19. A LOW-PHASE NOISE FREQUENCY MULTIPLIER CHAIN ...

    African Journals Online (AJOL)

    operations which are influenced by the development of frequency syn ..... The phase noise of the Isolation amplifier is also measured by .... obtained from manual. T(sec). 100. 1000. 10 ... IEEE Transations on Instrumentation and. Measurement ...

  20. Biomimetics

    Indian Academy of Sciences (India)

    M. Senthilkumar (Newgen Imaging) 1461 1996 Oct 15 13:05:22

    Biomimetics is the field of scientific endeavour, which attempts to design systems and syn- thesise materials through ... natural systems with a view to achieve analogous synthetic design and manufacture. On the ..... Industrial production.

  1. Survivable Active Networks

    National Research Council Canada - National Science Library

    Bowen, Thomas

    2001-01-01

    .... SAN technology remediates latent software errors that enable popular and powerful exploits, including stack and buffer overflows, race conditions, ping-of-death, neptune, port scanning, and syn-flooding...

  2. Nonionic emulsion-mediated synthesis of zeolite beta

    Indian Academy of Sciences (India)

    Administrator

    , 18 Fuxue ... alkylation, disproportionation and other organic synthesis processes at present (Camblor et al 1996). Usually, zeolite beta is synthesized by hydrothermal method at ... However, microemulsion has not yet been applied to syn-.

  3. The genetic factors influencing the development of trichotillomania

    Indian Academy of Sciences (India)

    other OCSD such as repetitive motor tics in Tourette's syn- ..... adult rat. Psychopharmacology 92, 164–168. Nicolini H., Arnold P., Nestadt G., Lanzagorta N. and Kennedy J. L. ... the temporal cortex of normal individuals and schizophrenics.

  4. A synopsis of the tribe Micrutalini Haupt (Homoptera, Membracidae, Smiliinae

    Directory of Open Access Journals (Sweden)

    Albino M. Sakakibara

    1999-01-01

    Full Text Available The tribe Micrutalini and its two genera, Trachytalis Fowler and Micrutalis Fowler, are redescribed. The following species are treated and, in some cases, nomenclatura! changes introduced: Trachytalis isabellina Fowler, 1895; T. distinguenda Fowler, 1895; T. retrofasciata (Lethierry, 1890, comb.n.; Micrutalis alrovena Goding, 1930; M. balteata (Fairmaire, 1846 = Aculalis lucidus Buckton, 1902, syn.n.; M. bella Goding, 1929; M. biguttula (Fairmaire, 1846, comb.n.; M. binaria (Fairmaire, 1846 = Acutalis flavivenlris Lethierry, 1890, syn.n.; M. callan-gensis Goding, 1930; M. calva (Say, 1830; M. discalis (Walker, 1858; M. dorsalis (Fitch, 1851; M. dubia Fowler, 1895 = M. zeteki Goding, 1928, syn.n.; M. flava Goding, 1929; M. flavozonala (Fairmaire, 1846, comb.n. = Acutalis geniculata Stál, 1862, syn.n. = Acutalis modesta Stál, 1862, syn.n.; M. godfreyi Sakakibara, 1976; M. incerla Sakakibara, 1976; M. lata Goding, 1930; M. litlerala (Fairmaire, 1846, comb.n.;M lugubrina(Stál, 1862;M malleiferaFovj]er, 1895 = M binariamutabilis Fowler, 1895, syn.n.; M. minutus Buckton, 1902; M. nigrolineata (Stál, 1864; M. nigromarginata Funkhouser, 1940; M. notalipennis Fowler, 1895; M. occidentalis (Goding, 1893; M. pollens Fowler, 1895; M. parva (Goding, 1893; M. plagíala (Stál, l&62 = AcutalisvariabiIisBerg, 1879,syn.n. =M. chapadensisGoding, 1930,syn.n.; M. punctifera (Walker, 1858; M. semialba (Stál, 1862; M. stipulipennis Buckton, 1902; M. tau Goding, 1930; M. trifurcala Goding, 1893; M. tripunctata (Fairmaire, 1846 = Acutalis moesta Stál, 1859, syn.n. = M. tartaredoides Goding, 1930, syn.n.. New species: Micrutalis diminuta sp.n. (Ecuador, Pichincha; Micrutalis divisa sp.n. (Brazil, Mato Grosso; Micrutalis henki sp.n. (Panama, Canal Zone; Micrutalis infúscala sp.n. (Venezuela, Portuguesa; Micrutalis margínala sp.n. (Brazil, Mato Grosso; Micrutalis meridana sp.n. (Venezuela, Mérida; Micrutalis mucuya sp.n. (Venezuela, Mérida; Micrutalis robustula

  5. The Exosomal/Total α-Synuclein Ratio in Plasma Is Associated With Glucocerebrosidase Activity and Correlates With Measures of Disease Severity in PD Patients

    Directory of Open Access Journals (Sweden)

    Silvia Cerri

    2018-05-01

    Full Text Available Intensive research efforts in the field of Parkinson’s disease (PD are focusing on identifying reliable biomarkers which possibly help physicians in predicting disease onset, diagnosis, and progression as well as evaluating the response to disease-modifying treatments. Given that abnormal alpha-synuclein (α-syn accumulation is a primary component of PD pathology, this protein has attracted considerable interest as a potential biomarker for PD. Alpha-synuclein can be detected in several body fluids, including plasma, where it can be found as free form or in association with exosomes, small membranous vesicles secreted by virtually all cell types. Together with α-syn accumulation, lysosomal dysfunctions seem to play a central role in the pathogenesis of PD, given the crucial role of lysosomes in the α-syn degradation. In particular, heterozygous mutations in the GBA1 gene encoding lysosomal enzyme glucocerebrosidase (GCase are currently considered as the most important risk factor for PD. Different studies have found that GCase deficiency leads to accumulation of α-syn; whereas at the same time, increased α-syn may inhibit GCase function, thus inducing a bidirectional pathogenic loop. In this study, we investigated whether changes in plasma total and exosome-associated α-syn could correlate with disease status and clinical parameters in PD and their relationship with GCase activity. We studied 39 PD patients (mean age: 65.2 ± 8.9; men: 25, without GBA1 mutations, and 33 age-matched controls (mean age: 61.9 ± 6.2; men: 15. Our results showed that exosomes from PD patients contain a greater amount of α-syn compared to healthy subjects (25.2 vs. 12.3 pg/mL, p < 0.001 whereas no differences were found in plasma total α-syn levels (15.7 vs. 14.8 ng/mL, p = 0.53. Moreover, we highlighted a significant increase of plasma exosomal α-syn/total α-syn ratio in PD patients (1.69 vs. 0.89, p < 0.001, which negatively correlates with disease

  6. Fluoxetine Ameliorates Behavioral and Neuropathological Deficits in a Transgenic Model Mouse of α-synucleinopathy

    Science.gov (United States)

    Ubhi, Kiren; Inglis, Chandra; Mante, Michael; Patrick, Christina; Adame, Anthony; Spencer, Brian; Rockenstein, Edward; May, Verena; Winkler, Juergen; Masliah, Eliezer

    2013-01-01

    The term α-synucleinopathies refers to a group of age-related neurological disorders including Parkinson’s disease (PD), Dementia with Lewy Bodies (DLB) and Multiple System Atrophy (MSA) that display an abnormal accumulation of alpha-synuclein (α-syn). In contrast to the neuronal α-syn accumulation observed in PD and DLB, MSA is characterized by a widespread oligodendrocytic α-syn accumulation. Transgenic mice expressing human α-syn under the oligodendrocyte-specific myelin basic protein promoter (MBP1-hαsyn tg mice) model many of the behavioral and neuropathological alterations observed in MSA. Fluoxetine, a selective serotonin reuptake inhibitor, has been shown to be protective in toxin-induced models of PD, however its effects in an in vivo transgenic model of α-synucleinopathy remain unclear. In this context, this study examined the effect of fluoxetine in the MBP1-hαsyn tg mice, a model of MSA. Fluoxetine adminstration ameliorated motor deficits in the MBP1-hαsyn tg mice, with a concomitant decrease in neurodegenerative pathology in the basal ganglia, neocortex and hippocampus. Fluoxetine adminstration also increased levels of the neurotrophic factors, GDNF (glial-derived neurotrophic factor) and BDNF (brain-derived neurotrophic factor) in the MBP1-hαsyn tg mice compared to vehicle-treated tg mice. This fluoxetine-induced increase in GDNF and BDNF protein levels was accompanied by activation of the ERK signaling pathway. The effects of fluoxetine adminstration on myelin and serotonin markers were also examined. Collectively these results indicate that fluoxetine may represent a novel therapeutic intervention for MSA and other neurodegenerative disorders. PMID:22281106

  7. Goldenhar syndrome and urogenital abnormalities

    Directory of Open Access Journals (Sweden)

    Mohan Marulaiah

    2003-01-01

    Full Text Available The Goldenhar syndrome (oculo-auriculo-vertebral syn-drome or 1st and 2nd branchial arch syndrome is a com-plex of craniofacial anomalies. It has been associated with anomalies in other systems and with abnormalities of the urogenital system. We present a case of Goldenhar syn-drome with multiple renal anomalies and a urogenital si-nus, which has not been reported before.

  8. Fluoxetine ameliorates behavioral and neuropathological deficits in a transgenic model mouse of α-synucleinopathy.

    Science.gov (United States)

    Ubhi, Kiren; Inglis, Chandra; Mante, Michael; Patrick, Christina; Adame, Anthony; Spencer, Brian; Rockenstein, Edward; May, Verena; Winkler, Juergen; Masliah, Eliezer

    2012-04-01

    The term α-synucleinopathies refers to a group of age-related neurological disorders including Parkinson's disease (PD), Dementia with Lewy Bodies (DLB) and Multiple System Atrophy (MSA) that display an abnormal accumulation of alpha-synuclein (α-syn). In contrast to the neuronal α-syn accumulation observed in PD and DLB, MSA is characterized by a widespread oligodendrocytic α-syn accumulation. Transgenic mice expressing human α-syn under the oligodendrocyte-specific myelin basic protein promoter (MBP1-hαsyn tg mice) model many of the behavioral and neuropathological alterations observed in MSA. Fluoxetine, a selective serotonin reuptake inhibitor, has been shown to be protective in toxin-induced models of PD, however its effects in an in vivo transgenic model of α-synucleinopathy remain unclear. In this context, this study examined the effect of fluoxetine in the MBP1-hαsyn tg mice, a model of MSA. Fluoxetine administration ameliorated motor deficits in the MBP1-hαsyn tg mice, with a concomitant decrease in neurodegenerative pathology in the basal ganglia, neocortex and hippocampus. Fluoxetine administration also increased levels of the neurotrophic factors, GDNF (glial-derived neurotrophic factor) and BDNF (brain-derived neurotrophic factor) in the MBP1-hαsyn tg mice compared to vehicle-treated tg mice. This fluoxetine-induced increase in GDNF and BDNF protein levels was accompanied by activation of the ERK signaling pathway. The effects of fluoxetine administration on myelin and serotonin markers were also examined. Collectively these results indicate that fluoxetine may represent a novel therapeutic intervention for MSA and other neurodegenerative disorders. Copyright © 2011 Elsevier Inc. All rights reserved.

  9. Analysis of hot and cold spots of UV target mutations of base substitution in the DNA site, encoding the transfer RNAsupF

    International Nuclear Information System (INIS)

    Grebneva, E.A.

    2012-01-01

    Analysis of 27 photo dimers which ate not hot and cold spots of ultraviolet mutagenesis confirm that hot spots of ultraviolet mutagenesis are those sis-syn cyclobutane cytosine-thymine and thymine-cytosine dimers, on which more energy flow down than on such cis-syn cyclobutane cytosine-thymine and thymine-cytosine dimers that are cold spots of ultraviolet mutagenesis. The proposed model is developed in framework of polymerase-tautomer model of ultraviolet mutagenesis

  10. FTY720/Fingolimod Reduces Synucleinopathy and Improves Gut Motility in A53T Mice: CONTRIBUTIONS OF PRO-BRAIN-DERIVED NEUROTROPHIC FACTOR (PRO-BDNF) AND MATURE BDNF.

    Science.gov (United States)

    Vidal-Martínez, Guadalupe; Vargas-Medrano, Javier; Gil-Tommee, Carolina; Medina, David; Garza, Nathan T; Yang, Barbara; Segura-Ulate, Ismael; Dominguez, Samantha J; Perez, Ruth G

    2016-09-23

    Patients with Parkinson's disease (PD) often have aggregated α-synuclein (aSyn) in enteric nervous system (ENS) neurons, which may be associated with the development of constipation. This occurs well before the onset of classic PD motor symptoms. We previously found that aging A53T transgenic (Tg) mice closely model PD-like ENS aSyn pathology, making them appropriate for testing potential PD therapies. Here we show that Tg mice overexpressing mutant human aSyn develop ENS pathology by 4 months. We then evaluated the responses of Tg mice and their WT littermates to the Food and Drug Administration-approved drug FTY720 (fingolimod, Gilenya) or vehicle control solution from 5 months of age. Long term oral FTY720 in Tg mice reduced ENS aSyn aggregation and constipation, enhanced gut motility, and increased levels of brain-derived neurotrophic factor (BDNF) but produced no significant change in WT littermates. A role for BDNF was directly assessed in a cohort of young A53T mice given vehicle, FTY720, the Trk-B receptor inhibitor ANA-12, or FTY720 + ANA-12 from 1 to 4 months of age. ANA-12-treated Tg mice developed more gut aSyn aggregation as well as constipation, whereas FTY720-treated Tg mice had reduced aSyn aggregation and less constipation, occurring in part by increasing both pro-BDNF and mature BDNF levels. The data from young and old Tg mice revealed FTY720-associated neuroprotection and reduced aSyn pathology, suggesting that FTY720 may also benefit PD patients and others with synucleinopathy. Another finding was a loss of tyrosine hydroxylase immunoreactivity in gut neurons with aggregated aSyn, comparable with our prior findings in the CNS. © 2016 by The American Society for Biochemistry and Molecular Biology, Inc.

  11. Impact of subunit linkages in an engineered homodimeric binding protein to α-synuclein.

    Science.gov (United States)

    Gauhar, Aziz; Shaykhalishahi, Hamed; Gremer, Lothar; Mirecka, Ewa A; Hoyer, Wolfgang

    2014-12-01

    Aggregation of the protein α-synuclein (α-syn) has been implicated in Parkinson's disease and other neurodegenerative disorders, collectively referred to as synucleinopathies. The β-wrapin AS69 is a small engineered binding protein to α-syn that stabilizes a β-hairpin conformation of monomeric α-syn and inhibits α-syn aggregation at substoichiometric concentrations. AS69 is a homodimer whose subunits are linked via a disulfide bridge between their single cysteine residues, Cys-28. Here we show that expression of a functional dimer as a single polypeptide chain is achievable by head-to-tail linkage of AS69 subunits. Choice of a suitable linker is essential for construction of head-to-tail dimers that exhibit undiminished α-syn affinity compared with the solely disulfide-linked dimer. We characterize AS69-GS3, a head-to-tail dimer with a glycine-serine-rich linker, under oxidized and reduced conditions in order to evaluate the impact of the Cys28-disulfide bond on structure, stability and α-syn binding. Formation of the disulfide bond causes compaction of AS69-GS3, increases its thermostability, and is a prerequisite for high-affinity binding to α-syn. Comparison of AS69-GS3 and AS69 demonstrates that head-to-tail linkage promotes α-syn binding by affording accelerated disulfide bond formation. © The Author 2014. Published by Oxford University Press. All rights reserved. For Permissions, please e-mail: journals.permissions@oup.com.

  12. An overview of Suctorian ciliates (Ciliophora, Suctorea) as epibionts of halacarid mites (Acari, Halacaridae)

    Digital Repository Service at National Institute of Oceanography (India)

    Dovgal, I.; Chatterjee, T.; Ingole, B.S.

    Subclass Exogenia Collin Order Metacinetida Jankowski Family Paracinetidae Jankowski Limnoricus ceter Jankowski, 1981 (Fig. 1–3) Diagnosis: Marine commensal, loricate, suctorian ciliate with stalk delimited from posterior margin of lorica. Both lorica...–11) =Thecacineta halacari Schulz, 1933 DOVGAL ET AL.62 · Zootaxa 1810 © 2008 Magnolia Press =Lissacineta allgeni Jankowski, 1981, syn. n. =Thecacineta allgeni (Jankowski, 1981), syn. n. Diagnosis: Marine suctorians with stylotheca. Cell body, slightly...

  13. Differential expression of the neural cell adhesion molecule NCAM 140 in human pituitary tumors

    OpenAIRE

    Aletsee-Ufrecht, M. C.; Langley, O. K.; Gratzl, O.; Gratzl, Manfred

    1990-01-01

    We have analyzed the expression of the intracellular marker protein neuron specific enolase (NSE), synaptophysin (SYN) and of the cell surface marker NCAM (neural cell adhesion molecule) in both normal human hypophysis and in pituitary adenomas in order to explore their potential use as diagnostic tools. All adenomas (4 prolactinomas, 3 growth hormone (GH) producing adenomas and 4 inactive adenomas) showed SYN and NSE immunoreactivity on tissue sections and this was confirmed by immunoblots. ...

  14. Data in support of the identification of neuronal and astrocyte proteins interacting with extracellularly applied oligomeric and fibrillar α-synuclein assemblies by mass spectrometry

    Directory of Open Access Journals (Sweden)

    Amulya Nidhi Shrivastava

    2016-06-01

    Full Text Available α-Synuclein (α-syn is the principal component of Lewy bodies, the pathophysiological hallmark of individuals affected by Parkinson disease (PD. This neuropathologic form of α-syn contributes to PD progression and propagation of α-syn assemblies between neurons. The data we present here support the proteomic analysis used to identify neuronal proteins that specifically interact with extracellularly applied oligomeric or fibrillar α-syn assemblies (conditions 1 and 2, respectively (doi: 10.15252/embj.201591397 [1]. α-syn assemblies and their cellular partner proteins were pulled down from neuronal cell lysed shortly after exposure to exogenous α-syn assemblies and the associated proteins were identified by mass spectrometry using a shotgun proteomic-based approach. We also performed experiments on pure cultures of astrocytes to identify astrocyte-specific proteins interacting with oligomeric or fibrillar α-syn (conditions 3 and 4, respectively. For each condition, proteins interacting selectively with α-syn assemblies were identified by comparison to proteins pulled-down from untreated cells used as controls. The mass spectrometry data, the database search and the peak lists have been deposited to the ProteomeXchange Consortium database via the PRIDE partner repository with the dataset identifiers PRIDE: http://www.ebi.ac.uk/pride/archive/projects/PXD002256 to PRIDE: http://www.ebi.ac.uk/pride/archive/projects/PXD002263 and doi: 10.6019/http://www.ebi.ac.uk/pride/archive/projects/PXD002256 to 10.6019/http://www.ebi.ac.uk/pride/archive/projects/PXD002263.

  15. In Silico and Fluorescence In Situ Hybridization Mapping Reveals Collinearity between the Pennisetum squamulatum Apomixis Carrier-Chromosome and Chromosome 2 of Sorghum and Foxtail Millet

    OpenAIRE

    Sapkota, Sirjan; Conner, Joann A.; Hanna, Wayne W.; Simon, Bindu; Fengler, Kevin; Deschamps, St?phane; Cigan, Mark; Ozias-Akins, Peggy

    2016-01-01

    Apomixis, or clonal propagation through seed, is a trait identified within multiple species of the grass family (Poaceae). The genetic locus controlling apomixis in Pennisetum squamulatum (syn Cenchrus squamulatus) and Cenchrus ciliaris (syn Pennisetum ciliare, buffelgrass) is the apospory-specific genomic region (ASGR). Previously, the ASGR was shown to be highly conserved but inverted in marker order between P. squamulatum and C. ciliaris based on fluorescence in situ hybridization (FISH) a...

  16. Rousseau som modsvar til forceret talentudvikling

    DEFF Research Database (Denmark)

    Holm, Claus; Nielsen, Jens Christian

    2015-01-01

    pædagogisk syn på børn og unges udvikling. Men dette syn er nu under pres. Det kommer for eksempel til udtryk, når en international idrætsaktør som FC Barcelona vil oprette elitært orienterede fodboldakademier for børn ned til 6-årsalderen i Danmark. Men inspireret af filosoffen Jean-Jacques Rousseau og...

  17. Enhancement of colon carcinogenesis by the combination of indole-3 carbinol and synbiotics in hemin-fed rats.

    Science.gov (United States)

    de Moura, Nelci A; Caetano, Brunno F R; de Moraes, Leonardo N; Carvalho, Robson F; Rodrigues, Maria A M; Barbisan, Luis F

    2018-02-01

    The risk of developing colorectal cancer (CRC) could be associated with red and processed meat intake. Experimental data supports that hemin iron, found abundantly in red meat, promotes CRC in mice and rats, while indole-3 carbinol (I3C) and synbiotics (syn) exert anti-carcinogenic activities in most studies of colon carcinogenesis. This study aimed to investigate the modifying effects of I3C and syn (inulin + Bifidobacterium lactis), given separately or together, on dimethylhidrazine (DMH)-induced colon carcinogenesis in hemin-fed rats. All animals were given four subcutaneous DMH injections and then, two weeks after carcinogen exposure, they began a basal diet containing hemin, hemin + I3C, hemin + syn, or hemin + I3C + syn for 23 weeks. The combination of I3C + syn significantly increased fecal water genotoxicity, tumor volume and invasiveness when compared to the hemin-fed control group. The groups fed I3C or syn alone had a significant reduction in the number of preneoplastic aberrant crypt foci (ACF) lesions compared to the hemin-fed group. Dietary I3C also reduced fecal water genotoxicity. Gene expression analysis of colorectal tumors demonstrated that the combination of dietary I3C + syn increased transcript levels for Raf1 and decreased tumor progression and invasiveness related to the genes Cdh1 and Appl1. This analysis also revealed that the Tnf and Cdh1 genes were significantly up- and down-regulated, respectively, in tumors of rats that received I3C, in comparison with the hemin-fed group. These findings reveal that the joint administration of I3C and syn enhanced the development of colon tumors induced by DMH in hemin-fed rats, while they potentially reduced ACF development when given alone. Copyright © 2017 Elsevier Ltd. All rights reserved.

  18. Enhanced motivation to alcohol in transgenic mice expressing human α-synuclein.

    Science.gov (United States)

    Rotermund, Carola; Reolon, Gustavo K; Leixner, Sarah; Boden, Cindy; Bilbao, Ainhoa; Kahle, Philipp J

    2017-11-01

    α-Synuclein (αSYN) is the neuropathological hallmark protein of Parkinson's disease (PD) and related neurodegenerative disorders. Moreover, the gene encoding αSYN (SNCA) is a major genetic contributor to PD. Interestingly, independent genome-wide association studies also identified SNCA as the most important candidate gene for alcoholism. Furthermore, single-nucleotide-polymorphisms have been associated with alcohol-craving behavior and alcohol-craving patients showed augmented αSYN expression in blood. To investigate the effect of αSYN on the addictive properties of chronic alcohol use, we examined consumption, motivation, and seeking responses induced by environmental stimuli and relapse behavior in transgenic mice expressing the human mutant [A30P]αSYN throughout the brain. The primary reinforcing effects of alcohol under operant self-administration conditions were increased, while consumption and the alcohol deprivation effect were not altered in the transgenic mice. The same mice were subjected to immunohistochemical measurements of immediate-early gene inductions in brain regions involved in addiction-related behaviors. Acute ethanol injection enhanced immunostaining for the phosphorylated form of cAMP response element binding protein in both amygdala and nucleus accumbens of αSYN transgenic mice, while in wild-type mice no effect was visible. However, at the same time, levels of cFos remain unchanged in both genotypes. These results provide experimental confirmation of SNCA as a candidate gene for alcoholism in addition to its known link to PD. © 2017 International Society for Neurochemistry.

  19. Effect of curcumin analogs onα-synuclein aggregation and cytotoxicity

    Science.gov (United States)

    Jha, Narendra Nath; Ghosh, Dhiman; Das, Subhadeep; Anoop, Arunagiri; Jacob, Reeba S.; Singh, Pradeep K.; Ayyagari, Narasimham; Namboothiri, Irishi N. N.; Maji, Samir K.

    2016-01-01

    Alpha-synuclein (α-Syn) aggregation into oligomers and fibrils is associated with dopaminergic neuron loss occurring in Parkinson’s disease (PD) pathogenesis. Compounds that modulate α-Syn aggregation and interact with preformed fibrils/oligomers and convert them to less toxic species could have promising applications in the drug development efforts against PD. Curcumin is one of the Asian food ingredient which showed promising role as therapeutic agent against many neurological disorders including PD. However, the instability and low solubility makes it less attractive for the drug development. In this work, we selected various curcumin analogs and studied their toxicity, stability and efficacy to interact with different α-Syn species and modulation of their toxicity. We found a subset of curcumin analogs with higher stability and showed that curcumin and its various analogs interact with preformed fibrils and oligomers and accelerate α-Syn aggregation to produce morphologically different amyloid fibrils in vitro. Furthermore, these curcumin analogs showed differential binding with the preformed α-Syn aggregates. The present data suggest the potential role of curcumin analogs in modulating α-Syn aggregation. PMID:27338805

  20. Alpha-synuclein is present in dental calculus but not altered in Parkinson's disease patients in comparison to controls.

    Science.gov (United States)

    Schmid, Sabrina; Goldberg-Bockhorn, Eva; Schwarz, Silke; Rotter, Nicole; Kassubek, Jan; Del Tredici, Kelly; Pinkhardt, Elmar; Otto, Markus; Ludolph, Albert C; Oeckl, Patrick

    2018-06-01

    In autopsy cases staged for sporadic Parkinson's disease (PD), the neuropathology is characterized by a preclinical phase that targets the enteric nervous system of the gastrointestinal tract (GIT). Therefore, the ENS might be a source of potential (presymptomatic) PD biomarkers. In this clinically based study, we examined the alpha-synuclein (αSyn) concentration in an easily accessible protein storage medium of the GIT, dental calculus, in 21/50 patients with PD and 28/50 age- and gender-matched controls using ELISA. αSyn was detectable in dental calculus and the median concentration in the control patients was 8.6 pg/mg calculus (interquartile range 2.6-13.1 pg/mg). αSyn concentrations were significantly influenced by blood contamination and samples with a hemoglobin concentration of > 4000 ng/mL were excluded. There was no significant difference of αSyn concentrations in the dental calculus of PD patients (5.76 pg/mg, interquartile range 2.91-9.74 pg/mg) compared to those in controls (p = 0.40). The total αSyn concentration in dental calculus is not a suitable biomarker for sporadic PD. Disease-related variants such as oligomeric or phosphorylated αSyn in calculus might prove to be more specific.

  1. Synthesising acid mine drainage to maintain and exploit indigenous mining micro-algae and microbial assemblies for biotreatment investigations.

    Science.gov (United States)

    Orandi, Sanaz; Lewis, David M

    2013-02-01

    The stringent regulations for discharging acid mine drainage (AMD) has led to increased attention on traditional or emerging treatment technologies to establish efficient and sustainable management for mine effluents. To assess new technologies, laboratory investigations on AMD treatment are necessary requiring a consistent supply of AMD with a stable composition, thus limiting environmental variability and uncertainty during controlled experiments. Additionally, biotreatment systems using live cells, particularly micro-algae, require appropriate nutrient availability. Synthetic AMD (Syn-AMD) meets these requirements. However, to date, most of the reported Syn-AMDs are composed of only a few selected heavy metals without considering the complexity of actual AMD. In this study, AMD was synthesised based on the typical AMD characteristics from a copper mine where biotreatment is being considered using indigenous AMD algal-microbes. Major cations (Ca, Na, Cu, Zn, Mg, Mn and Ni), trace metals (Al, Fe, Ag, Na, Co, Mo, Pb and Cr), essential nutrients (N, P and C) and high SO(4) were incorporated into the Syn-AMD. This paper presents the preparation of chemically complex Syn-AMD and the challenges associated with combining metal salts of varying solubility that is not restricted to one particular mine site. The general approach reported and the particular reagents used can produce alternative Syn-AMD with varying compositions. The successful growth of indigenous AMD algal-microbes in the Syn-AMD demonstrated its applicability as appropriate generic media for cultivation and maintenance of mining microorganisms for future biotreatment studies.

  2. Revisão de Alchisme Kirkaldy (Hemiptera, Membracidae, Membracinae, Hoplophorionini Revision of Alchisme Kirkaldy (Hemiptera, Membracidae, Membracinae, Hoplophorionini

    Directory of Open Access Journals (Sweden)

    Antonio J. Creão-Duarte

    1997-01-01

    Full Text Available Thirty four (34 species of Alchisme Kirkaldy, 1904 are presented with descriptions, illustrations, and key for identification, except for two of them which were not seen, A. truncaticornis (Germar, 1835 and A. intermedia (Distant, 1881. The following nomenclatural changes are introduced: Achisme intermedia (Distant, 1881, sp. rev.; A. testacea (Fairmaire, 1846, sp. rev.; Alchisme apicalis (Walker, 1851 = A. costaricensis Goding, 1929, syn.n.; A. inermis (Fairmaire, 1846 = Triquetra nigrocarinala Fairmaire, 1846, syn.n.; A. rubrocostata (Spinola, 1852 = A. neuquina Remes-Lenicov, 1978, syn.n.; A. turrita (Germar, 1835 = Triquetra submaculata Buckton, 1901, syn.n.; A. ustulata (Fairmaire, 1846 = Triquetra virgata Fairmaire, 1846, syn.n.; A. virescens (Fairmaire, 1846 = Alchisme spinosa Funkhouser, 1940, syn.n.; Alchisme banosiensis sp.n. (from Ecuador; A. bordoni sp.n. (from Venezuela; A. colombiana sp.n. (from Colombia; A. salta sp.n. (from Argentina; A. cultellata sp.n. (from Venezuela; A. deflexa sp.n. (from Venezuela; A. erecta sp.n. (from Venezuela; A. frontomaculata sp.n. (from Brazil; A. goiana sp.n. (from Brazil; A. henryi sp.n. (from Venezuela; A. insolita sp.n. (from Colombia; A. mackameyi sp.n. (from Ecuador; A. onorei sp.n. (from Ecuador; A. schuhi sp.n. (from Peru.

  3. Recapitulating the Structural Evolution of Redox Regulation in Adenosine 5'-Phosphosulfate Kinase from Cyanobacteria to Plants.

    Science.gov (United States)

    Herrmann, Jonathan; Nathin, David; Lee, Soon Goo; Sun, Tony; Jez, Joseph M

    2015-10-09

    In plants, adenosine 5'-phosphosulfate (APS) kinase (APSK) is required for reproductive viability and the production of 3'-phosphoadenosine 5'-phosphosulfate (PAPS) as a sulfur donor in specialized metabolism. Previous studies of the APSK from Arabidopsis thaliana (AtAPSK) identified a regulatory disulfide bond formed between the N-terminal domain (NTD) and a cysteine on the core scaffold. This thiol switch is unique to mosses, gymnosperms, and angiosperms. To understand the structural evolution of redox control of APSK, we investigated the redox-insensitive APSK from the cyanobacterium Synechocystis sp. PCC 6803 (SynAPSK). Crystallographic analysis of SynAPSK in complex with either APS and a non-hydrolyzable ATP analog or APS and sulfate revealed the overall structure of the enzyme, which lacks the NTD found in homologs from mosses and plants. A series of engineered SynAPSK variants reconstructed the structural evolution of the plant APSK. Biochemical analyses of SynAPSK, SynAPSK H23C mutant, SynAPSK fused to the AtAPSK NTD, and the fusion protein with the H23C mutation showed that the addition of the NTD and cysteines recapitulated thiol-based regulation. These results reveal the molecular basis for structural changes leading to the evolution of redox control of APSK in the green lineage from cyanobacteria to plants. © 2015 by The American Society for Biochemistry and Molecular Biology, Inc.

  4. Recapitulating the Structural Evolution of Redox Regulation in Adenosine 5′-Phosphosulfate Kinase from Cyanobacteria to Plants*

    Science.gov (United States)

    Herrmann, Jonathan; Nathin, David; Lee, Soon Goo; Sun, Tony; Jez, Joseph M.

    2015-01-01

    In plants, adenosine 5′-phosphosulfate (APS) kinase (APSK) is required for reproductive viability and the production of 3′-phosphoadenosine 5′-phosphosulfate (PAPS) as a sulfur donor in specialized metabolism. Previous studies of the APSK from Arabidopsis thaliana (AtAPSK) identified a regulatory disulfide bond formed between the N-terminal domain (NTD) and a cysteine on the core scaffold. This thiol switch is unique to mosses, gymnosperms, and angiosperms. To understand the structural evolution of redox control of APSK, we investigated the redox-insensitive APSK from the cyanobacterium Synechocystis sp. PCC 6803 (SynAPSK). Crystallographic analysis of SynAPSK in complex with either APS and a non-hydrolyzable ATP analog or APS and sulfate revealed the overall structure of the enzyme, which lacks the NTD found in homologs from mosses and plants. A series of engineered SynAPSK variants reconstructed the structural evolution of the plant APSK. Biochemical analyses of SynAPSK, SynAPSK H23C mutant, SynAPSK fused to the AtAPSK NTD, and the fusion protein with the H23C mutation showed that the addition of the NTD and cysteines recapitulated thiol-based regulation. These results reveal the molecular basis for structural changes leading to the evolution of redox control of APSK in the green lineage from cyanobacteria to plants. PMID:26294763

  5. Early administration of probiotic Lactobacillus acidophilus and/or prebiotic inulin attenuates pathogen-mediated intestinal inflammation and Smad 7 cell signaling

    Science.gov (United States)

    Foye, Ondulla T.; Huang, I-Fei; Chiou, Christine C.; Walker, W. Allan; Shi, Hai Ning

    2014-01-01

    Immaturity of gut-associated immunity may contribute to pediatric mortality associated with enteric infections. A murine model to parallel infantile enteric disease was used to determine the effects of probiotic, Lactobacillus acidophilus (La), prebiotic, inulin, or both (synbiotic, syn) on pathogen-induced inflammatory responses, NF-κB, and Smad 7 signaling. Newborn mice were inoculated bi-weekly for 4 weeks with La, inulin, or syn and challenged with Citrobacter rodentium (Cr) at 5 weeks. Mouse intestinal epithelial cells (CMT93) were exposed to Cr to determine temporal alterations in NF-Kappa B and Smad 7 levels. Mice with pretreatment of La, inulin, and syn show reduced intestinal inflammation following Cr infection compared with controls, which is associated with significantly reduced bacterial colonization in La, inulin, and syn animals. Our results further show that host defense against Cr infection correlated with enhanced colonic IL-10 and transforming growth factor-β expression and inhibition of NF-κB in syn-treated mice, whereas mice pretreated with syn, La, or inulin had attenuation of Cr-induced Smad 7 expression. There was a temporal Smad 7 and NF-κB intracellular accumulation post-Cr infection and post-tumor necrosis factor stimulation in CMT93 cells. These results, therefore, suggest that probiotic, La, prebiotic inulin, or synbiotic may promote host-protective immunity and attenuate Cr-induced intestinal inflammation through mechanisms affecting NF-κB and Smad 7 signaling. PMID:22524476

  6. The relationship between objectively measured physical activity, salivary cortisol, and the metabolic syndrome score in girls.

    Science.gov (United States)

    DuBose, Katrina D; McKune, Andrew J

    2014-08-01

    The relationship between physical activity levels, salivary cortisol, and the metabolic syndrome (MetSyn) score was examined. Twenty-three girls (8.4 ± 0.9 years) had a fasting blood draw, waist circumference and blood pressure measured, and wore an ActiGraph accelerometer for 5 days. Saliva samples were collected to measure cortisol levels. Previously established cut points estimated the minutes spent in moderate, vigorous, and moderate-to-vigorous physical activity. A continuous MetSyn score was created from blood pressure, waist circumference, high-density-lipoprotein (HDL), triglyceride, and glucose values. Correlation analyses examined associations between physical activity, cortisol, the MetSyn score, and its related components. Regression analysis examined the relationship between cortisol, the MetSyn score, and its related components adjusting for physical activity, percent body fat, and sexual maturity. Vigorous physical activity was positively related with 30 min post waking cortisol values. The MetSyn score was not related with cortisol values after controlling for confounders. In contrast, HDL was negatively related with 30 min post waking cortisol. Triglyceride was positively related with 30 min post waking cortisol and area under the curve. The MetSyn score and many of its components were not related to cortisol salivary levels even after adjusting for physical activity, body fat percentage, and sexual maturity.

  7. The Palaearctic types of Chrysididae (Insecta, Hymenoptera) deposited in the Hungarian Natural History Museum, Budapest.

    Science.gov (United States)

    Rosa, Paolo; Vas, Zoltán; Xu, Zai-Fu

    2017-04-11

    A critical and annotated catalogue of the Palaearctic types of chrysidid species, subspecies and varieties deposited in the Magyar Természettudományi Múzeum is given. The lectotype of Hedychrum luculentum Förster, 1853 and the neotype of Chrysis amasina Mocsáry, 1889 are designated. Six new synonyms are proposed: Chrysis varicornis Spinola, 1838 = Chrysis cyanocoelia Mocsáry, 1889, syn. nov.; Hedychridium adventicium Zimmermann, 1962 = Hedychridium jazygicum Móczár, 1964, syn. nov.; Hedychrum cribratum Mocsáry, 1909 = Hedychrum punctigerum Mocsáry, 1909, syn. nov.; Holopyga generosa (Förster, 1853) = Holopyga hortobagyensis Móczár, 1984, syn. nov.; Holopyga turkestanica Mocsáry, 1909 = Holopyga crassepuncta Semenov, 1954, syn. nov.; and Pseudomalus cupratus (Mocsáry, 1889) = Pseudomalus meridianus Strumia, 1996, syn. nov.. One species is revalidated: Holopyga turkestanica Mocsáry, 1909, stat. resurr.. New status is proposed for: Pseudomalus cupratus (Mocsáry, 1889), stat. nov.. New combination is proposed for: Hedychridium amoenum (Mocsáry, 1911), comb. nov.. The reversal of priority is proposed for: Ellampus biaccinctus du Buysson, 1893, nomen protectum, and E. auratus var. gasperinii Mocsáry, 1889, nomen oblitum. New name is proposed for: Chrysis fusca Rosa, nom. nov. pro Chrysis ignita var. infuscata Mocsáry, 1889 nec Brullé, 1846. Pictures of eighty-nine type specimens are also provided.

  8. Stereoselective synthesis and pharmacological evaluation of [4.3.3]propellan-8-amines as analogs of adamantanamines.

    Science.gov (United States)

    Torres-Gómez, Héctor; Lehmkuhl, Kirstin; Frehland, Bastian; Daniliuc, Constantin; Schepmann, Dirk; Ehrhardt, Christina; Wünsch, Bernhard

    2015-08-01

    Amantadine (1) exerts its anti-Parkinson effects by inhibition of the NMDA associated cation channel and its antiviral activity by inhibition of the M2 protein channel of influenza A viruses. Herein the synthesis, NMDA receptor affinity and anti-influenza activity of analogous propellanamines 3 are reported. The key steps in the synthesis of the diastereomeric propellanamines syn-3 and anti-3 are diastereoselective reduction of the ketone 7 with L-Selectride to give anti-11, Mitsunobu inversion of the alcohol anti-13 into syn-13, and SN2 substitution of diastereomeric mesylates syn-14 and anti-14 with NaN3. The affinity of the propellanamines syn-3 and anti-3 to the PCP binding site of the NMDA receptor is similar to that of amantadine (Ki=11 μM). However, both propellanamines syn-3 and anti-3 do not exhibit activity against influenza A viruses. Compared to amantadine (1), the structurally related propellanamines syn-3 and anti-3 retain the NMDA antagonistic activity but loose the antiviral activity. Copyright © 2015 Elsevier Ltd. All rights reserved.

  9. Psychosocial Factors in the Relationship between Socioeconomic Status and Cardiometabolic Risk: the HCHS/SOL Sociocultural Ancillary Study.

    Science.gov (United States)

    McCurley, Jessica L; Penedo, Frank; Roesch, Scott C; Isasi, Carmen R; Carnethon, Mercedes; Sotres-Alvarez, Daniela; Schneiderman, Neil; Gonzalez, Patricia; Chirinos, Diana A; Camacho, Alvaro; Teng, Yanping; Gallo, Linda C

    2017-08-01

    U.S. Hispanics/Latinos display a high prevalence of metabolic syndrome (MetSyn), a group of co-occurring cardiometabolic risk factors (abdominal obesity, impaired fasting glucose, dyslipidemia, elevated blood pressure) associated with higher cardiovascular disease and mortality risk. Low socioeconomic status (SES) is associated with higher risk for MetSyn in Hispanics/Latinos, and psychosocial factors may play a role in this relationship. This cross-sectional study examined psychosocial factors in the association of SES and MetSyn components in 4,996 Hispanic/Latino adults from the Hispanic Community Health Study/Study of Latinos (HCHS/SOL) Sociocultural Ancillary Study. MetSyn components were measured at the baseline examination. Participants completed interviews to determine psychosocial risks (e.g., depression) and resources (e.g., social support) within 9 months of baseline (psychosocial indicators, and three factors for MetSyn [blood pressure, lipids, metabolic factors]. SEMs showed that lower SES was related to MetSyn factors indirectly through higher psychosocial risk/lower resources (Y-Bχ 2 (df = 420) = 4412.90, p psychosocial risk/resource variables (Mackinnon's 95% asymmetric CI = -0.13 to -0.02). SES is related to metabolic variables indirectly through psychosocial factors in U.S. Hispanics/Latinos of diverse ancestries.

  10. Neural control of blood flow during exercise in human metabolic syndrome.

    Science.gov (United States)

    Limberg, Jacqueline K; Morgan, Barbara J; Sebranek, Joshua J; Proctor, Lester T; Eldridge, Marlowe W; Schrage, William G

    2014-09-01

    α-Adrenergic-mediated vasoconstriction is greater during simulated exercise in animal models of metabolic syndrome (MetSyn) when compared with control animals. In an attempt to translate such findings to humans, we hypothesized that adults with MetSyn (n = 14, 35 ± 3 years old) would exhibit greater α-adrenergic responsiveness during exercise when compared with age-matched healthy control subjects (n = 16, 31 ± 3 years old). We measured muscle sympathetic nerve activity (MSNA; microneurography) and forearm blood flow (Doppler ultrasound) during dynamic forearm exercise (15% of maximal voluntary contraction). α-Adrenergic agonists (phenylephrine and clonidine) and an antagonist (phentolamine) were infused intra-arterially to assess α-adrenergic receptor responsiveness and restraint, respectively. Resting MSNA was ∼35% higher in adults with MetSyn (P exercise. Clonidine-mediated vasoconstriction was greater in adults with MetSyn (P  0.05). Interestingly, exercise-mediated vasodilatation was greater in MetSyn (P exercise blood flow during low-intensity hand-grip exercise when compared with age-matched healthy control subjects. These results suggest that adults with MetSyn exhibit compensatory vascular control mechanisms capable of preserving blood flow responses to exercise in the face of augmented sympathetic adrenergic activity. © 2014 The Authors. Experimental Physiology © 2014 The Physiological Society.

  11. α-synuclein assemblies sequester neuronal α3-Na+/K+-ATPase and impair Na+ gradient

    Science.gov (United States)

    Shrivastava, Amulya Nidhi; Redeker, Virginie; Fritz, Nicolas; Pieri, Laura; Almeida, Leandro G; Spolidoro, Maria; Liebmann, Thomas; Bousset, Luc; Renner, Marianne; Léna, Clément; Aperia, Anita; Melki, Ronald; Triller, Antoine

    2015-01-01

    Extracellular α-synuclein (α-syn) assemblies can be up-taken by neurons; however, their interaction with the plasma membrane and proteins has not been studied specifically. Here we demonstrate that α-syn assemblies form clusters within the plasma membrane of neurons. Using a proteomic-based approach, we identify the α3-subunit of Na+/K+-ATPase (NKA) as a cell surface partner of α-syn assemblies. The interaction strength depended on the state of α-syn, fibrils being the strongest, oligomers weak, and monomers none. Mutations within the neuron-specific α3-subunit are linked to rapid-onset dystonia Parkinsonism (RDP) and alternating hemiplegia of childhood (AHC). We show that freely diffusing α3-NKA are trapped within α-syn clusters resulting in α3-NKA redistribution and formation of larger nanoclusters. This creates regions within the plasma membrane with reduced local densities of α3-NKA, thereby decreasing the efficiency of Na+ extrusion following stimulus. Thus, interactions of α3-NKA with extracellular α-syn assemblies reduce its pumping activity as its mutations in RDP/AHC. PMID:26323479

  12. Nanomechanical properties of distinct fibrillar polymorphs of the protein α-synuclein

    Science.gov (United States)

    Makky, Ali; Bousset, Luc; Polesel-Maris, Jérôme; Melki, Ronald

    2016-11-01

    Alpha-synuclein (α-Syn) is a small presynaptic protein of 140 amino acids. Its pathologic intracellular aggregation within the central nervous system yields protein fibrillar inclusions named Lewy bodies that are the hallmarks of Parkinson’s disease (PD). In solution, pure α-Syn adopts an intrinsically disordered structure and assembles into fibrils that exhibit considerable morphological heterogeneity depending on their assembly conditions. We recently established tightly controlled experimental conditions allowing the assembly of α-Syn into highly homogeneous and pure polymorphs. The latter exhibited differences in their shape, their structure but also in their functional properties. We have conducted an AFM study at high resolution and performed a statistical analysis of fibrillar α-Syn shape and thermal fluctuations to calculate the persistence length to further assess the nanomechanical properties of α-Syn polymorphs. Herein, we demonstrated quantitatively that distinct polymorphs made of the same protein (wild-type α-Syn) show significant differences in their morphology (height, width and periodicity) and physical properties (persistence length, bending rigidity and axial Young’s modulus).

  13. α-Synuclein Amyloids Hijack Prion Protein to Gain Cell Entry, Facilitate Cell-to-Cell Spreading and Block Prion Replication.

    Science.gov (United States)

    Aulić, Suzana; Masperone, Lara; Narkiewicz, Joanna; Isopi, Elisa; Bistaffa, Edoardo; Ambrosetti, Elena; Pastore, Beatrice; De Cecco, Elena; Scaini, Denis; Zago, Paola; Moda, Fabio; Tagliavini, Fabrizio; Legname, Giuseppe

    2017-08-30

    The precise molecular mechanism of how misfolded α-synuclein (α-Syn) accumulates and spreads in synucleinopathies is still unknown. Here, we show the role of the cellular prion protein (PrP C ) in mediating the uptake and the spread of recombinant α-Syn amyloids. The in vitro data revealed that the presence of PrP C fosters the higher uptake of α-Syn amyloid fibrils, which was also confirmed in vivo in wild type (Prnp +/+ ) compared to PrP knock-out (Prnp -/- ) mice. Additionally, the presence of α-Syn amyloids blocked the replication of scrapie prions (PrP Sc ) in vitro and ex vivo, indicating a link between the two proteins. Indeed, whilst PrP C is mediating the internalization of α-Syn amyloids, PrP Sc is not able to replicate in their presence. This observation has pathological relevance, since several reported case studies show that the accumulation of α-Syn amyloid deposits in Creutzfeldt-Jakob disease patients is accompanied by a longer disease course.

  14. Alterations in mGluR5 expression and signaling in Lewy body disease and in transgenic models of alpha-synucleinopathy--implications for excitotoxicity.

    Directory of Open Access Journals (Sweden)

    Diana L Price

    2010-11-01

    Full Text Available Dementia with Lewy bodies (DLB and Parkinson's Disease (PD are neurodegenerative disorders of the aging population characterized by the abnormal accumulation of alpha-synuclein (alpha-syn. Previous studies have suggested that excitotoxicity may contribute to neurodegeneration in these disorders, however the underlying mechanisms and their relationship to alpha-syn remain unclear. For this study we proposed that accumulation of alpha-syn might result in alterations in metabotropic glutamate receptors (mGluR, particularly mGluR5 which has been linked to deficits in murine models of PD. In this context, levels of mGluR5 were analyzed in the brains of PD and DLB human cases and alpha-syn transgenic (tg mice and compared to age-matched, unimpaired controls, we report a 40% increase in the levels of mGluR5 and beta-arrestin immunoreactivity in the frontal cortex, hippocampus and putamen in DLB cases and in the putamen in PD cases. In the hippocampus, mGluR5 was more abundant in the CA3 region and co-localized with alpha-syn aggregates. Similarly, in the hippocampus and basal ganglia of alpha-syn tg mice, levels of mGluR5 were increased and mGluR5 and alpha-syn were co-localized and co-immunoprecipitated, suggesting that alpha-syn interferes with mGluR5 trafficking. The increased levels of mGluR5 were accompanied by a concomitant increase in the activation of downstream signaling components including ERK, Elk-1 and CREB. Consistent with the increased accumulation of alpha-syn and alterations in mGluR5 in cognitive- and motor-associated brain regions, these mice displayed impaired performance in the water maze and pole test, these behavioral alterations were reversed with the mGluR5 antagonist, MPEP. Taken together the results from study suggest that mGluR5 may directly interact with alpha-syn resulting in its over activation and that this over activation may contribute to excitotoxic cell death in select neuronal regions. These results highlight the

  15. The role of alpha-synuclein in melanin synthesis in melanoma and dopaminergic neuronal cells.

    Directory of Open Access Journals (Sweden)

    Tianhong Pan

    Full Text Available The relatively high co-occurrence of Parkinson's disease (PD and melanoma has been established by a large number of epidemiological studies. However, a clear biological explanation for this finding is still lacking. Ultra-violet radiation (UVR-induced skin melanin synthesis is a defense mechanism against UVR-induced damage relevant to the initiation of melanoma, whereas, increased neuromelanin (NM, the melanin synthesized in dopaminergic neurons, may enhance the susceptibility to oxidative stress-induced neuronal injury relevant to PD. SNCA is a PD-causing gene coding for alpha-Synuclein (α-Syn that expresses not only in brain, but also in skin as well as in tumors, such as melanoma. The findings that α-Syn can interact with tyrosinase (TYR and inhibit tyrosine hydroxylase (TH, both of which are enzymes involved in the biosynthesis of melanin and dopamine (DA, led us to propose that α-Syn may participate in the regulation of melanin synthesis. In this study, by applying ultraviolet B (UVB light, a physiologically relevant stimulus of melanogenesis, we detected melanin synthesis in A375 and SK-MEL-28 melanoma cells and in SH-SY5Y and PC12 dopaminergic neuronal cells and determined effects of α-Syn on melanin synthesis. Our results showed that UVB light exposure increased melanin synthesis in all 4 cell lines. However, we found that α-Syn expression reduced UVB light-induced increase of melanin synthesis and that melanin content was lower when melanoma cells were expressed with α-Syn, indicating that α-Syn may have inhibitory effects on melanin synthesis in melanoma cells. Different from melanoma cells, the melanin content was higher in α-Syn-over-expressed dopaminergic neuronal SH-SY5Y and PC12 cells, cellular models of PD, than that in non-α-Syn-expressed control cells. We concluded that α-Syn could be one of the points responsible for the positive association between PD and melanoma via its differential roles in melanin synthesis in

  16. A systematic catalogue of butterflies of the former Soviet Union (Armenia, Azerbaijan, Belarus, Estonia, Georgia, Kyrgyzstan, Kazakhstan, Latvia, Lituania, Moldova, Russia, Tajikistan, Turkmenistan, Ukraine, Uzbekistan) with special account to their type specimens (Lepidoptera: Hesperioidea, Papilionoidea).

    Science.gov (United States)

    Korb, Stanislav K; Bolshakov, Lavr V

    2016-09-01

    comma repugnans (Staudinger, 1892) = lena Korshunov et Gorbunov, 1995, syn.n.; Argynnis niobe orientalis Alphéraky, 1881 =ornata Staudinger, 1901, syn.n. =tanjusha Zhdanko, 2011, syn.n.; Boloria frigga gibsoni (Barnes & Benjamin, 1926) = kosarevi Korb, 2011, syn.n., B. erubescens houri Wyatt, 1961 =ancilla Churkin, 2004, syn.n.; Melitaea fergana maracandica Staudinger, 1882 = irinae Churkin, Kolesnichenko et Tremasov, 2012, syn.n.; M. asteroida clara Staudinger, 1887 =ludmilla Churkin, Kolesnichenko et Tuzov, 2000, syn.n.; Paralasa jordana jordana (Staudinger, 1882) =khramovi Churkin et Pletnev, 2012, syn.n.; P. jordana subocellata (Staudinger, 1901) =kipnisi Churkin et Pletnev, 2012, syn.n.; P. kusnezovi kusnezovi (Avinov, 1910) =bosbutaensis Churkin et Pletnev, 2012, syn.n.; Erebia meta Staudinger, 1886 =gertha Staudinger, 1886, syn.n.; Oeneis ammon ammon Elwes, 1899 =smirnovi Yakovlev, 2011, syn.n.; O. norna tundra A.Bang-Haas, 1912 =ivonini Yakovlev, 2011, syn.n.; Chazara briseis ianthe (Pallas, 1771) =lyrnessus Fruhstorfer, 1908, syn.n., Plebejides stekolnikovi (Stradomsky et Tikhonov, 2015), comb.n.

  17. Characterization of cognitive deficits in rats overexpressing human alpha-synuclein in the ventral tegmental area and medial septum using recombinant adeno-associated viral vectors.

    Science.gov (United States)

    Hall, Hélène; Jewett, Michael; Landeck, Natalie; Nilsson, Nathalie; Schagerlöf, Ulrika; Leanza, Giampiero; Kirik, Deniz

    2013-01-01

    Intraneuronal inclusions containing alpha-synuclein (a-syn) constitute one of the pathological hallmarks of Parkinson's disease (PD) and are accompanied by severe neurodegeneration of A9 dopaminergic neurons located in the substantia nigra. Although to a lesser extent, A10 dopaminergic neurons are also affected. Neurodegeneration of other neuronal populations, such as the cholinergic, serotonergic and noradrenergic cell groups, has also been documented in PD patients. Studies in human post-mortem PD brains and in rodent models suggest that deficits in cholinergic and dopaminergic systems may be associated with the cognitive impairment seen in this disease. Here, we investigated the consequences of targeted overexpression of a-syn in the mesocorticolimbic dopaminergic and septohippocampal cholinergic pathways. Rats were injected with recombinant adeno-associated viral vectors encoding for either human wild-type a-syn or green fluorescent protein (GFP) in the ventral tegmental area and the medial septum/vertical limb of the diagonal band of Broca, two regions rich in dopaminergic and cholinergic neurons, respectively. Histopathological analysis showed widespread insoluble a-syn positive inclusions in all major projections areas of the targeted nuclei, including the hippocampus, neocortex, nucleus accumbens and anteromedial striatum. In addition, the rats overexpressing human a-syn displayed an abnormal locomotor response to apomorphine injection and exhibited spatial learning and memory deficits in the Morris water maze task, in the absence of obvious spontaneous locomotor impairment. As losses in dopaminergic and cholinergic immunoreactivity in both the GFP and a-syn expressing animals were mild-to-moderate and did not differ from each other, the behavioral impairments seen in the a-syn overexpressing animals appear to be determined by the long term persisting neuropathology in the surviving neurons rather than by neurodegeneration.

  18. Ethylene Regulates the Physiology of the Cyanobacterium Synechocystis sp. PCC 6803 via an Ethylene Receptor1[OPEN

    Science.gov (United States)

    2016-01-01

    Ethylene is a plant hormone that plays a crucial role in the growth and development of plants. The ethylene receptors in plants are well studied, and it is generally assumed that they are found only in plants. In a search of sequenced genomes, we found that many bacterial species contain putative ethylene receptors. Plants acquired many proteins from cyanobacteria as a result of the endosymbiotic event that led to chloroplasts. We provide data that the cyanobacterium Synechocystis (Synechocystis sp. PCC 6803) has a functional receptor for ethylene, Synechocystis Ethylene Response1 (SynEtr1). We first show that SynEtr1 directly binds ethylene. Second, we demonstrate that application of ethylene to Synechocystis cells or disruption of the SynEtr1 gene affects several processes, including phototaxis, type IV pilus biosynthesis, photosystem II levels, biofilm formation, and spontaneous cell sedimentation. Our data suggest a model where SynEtr1 inhibits downstream signaling and ethylene inhibits SynEtr1. This is similar to the inverse-agonist model of ethylene receptor signaling proposed for plants and suggests a conservation of structure and function that possibly originated over 1 billion years ago. Prior research showed that SynEtr1 also contains a light-responsive phytochrome-like domain. Thus, SynEtr1 is a bifunctional receptor that mediates responses to both light and ethylene. To our knowledge, this is the first demonstration of a functional ethylene receptor in a nonplant species and suggests that that the perception of ethylene is more widespread than previously thought. PMID:27246094

  19. Ethylene Regulates the Physiology of the Cyanobacterium Synechocystis sp. PCC 6803 via an Ethylene Receptor.

    Science.gov (United States)

    Lacey, Randy F; Binder, Brad M

    2016-08-01

    Ethylene is a plant hormone that plays a crucial role in the growth and development of plants. The ethylene receptors in plants are well studied, and it is generally assumed that they are found only in plants. In a search of sequenced genomes, we found that many bacterial species contain putative ethylene receptors. Plants acquired many proteins from cyanobacteria as a result of the endosymbiotic event that led to chloroplasts. We provide data that the cyanobacterium Synechocystis (Synechocystis sp. PCC 6803) has a functional receptor for ethylene, Synechocystis Ethylene Response1 (SynEtr1). We first show that SynEtr1 directly binds ethylene. Second, we demonstrate that application of ethylene to Synechocystis cells or disruption of the SynEtr1 gene affects several processes, including phototaxis, type IV pilus biosynthesis, photosystem II levels, biofilm formation, and spontaneous cell sedimentation. Our data suggest a model where SynEtr1 inhibits downstream signaling and ethylene inhibits SynEtr1. This is similar to the inverse-agonist model of ethylene receptor signaling proposed for plants and suggests a conservation of structure and function that possibly originated over 1 billion years ago. Prior research showed that SynEtr1 also contains a light-responsive phytochrome-like domain. Thus, SynEtr1 is a bifunctional receptor that mediates responses to both light and ethylene. To our knowledge, this is the first demonstration of a functional ethylene receptor in a nonplant species and suggests that that the perception of ethylene is more widespread than previously thought. © 2016 American Society of Plant Biologists. All Rights Reserved.

  20. Nitrated alpha-synuclein immunity accelerates degeneration of nigral dopaminergic neurons.

    Directory of Open Access Journals (Sweden)

    Eric J Benner

    2008-01-01

    Full Text Available The neuropathology of Parkinson's disease (PD includes loss of dopaminergic neurons in the substantia nigra, nitrated alpha-synuclein (N-alpha-Syn enriched intraneuronal inclusions or Lewy bodies and neuroinflammation. While the contribution of innate microglial inflammatory activities to disease are known, evidence for how adaptive immune mechanisms may affect the course of PD remains obscure. We reasoned that PD-associated oxidative protein modifications create novel antigenic epitopes capable of peripheral adaptive T cell responses that could affect nigrostriatal degeneration.Nitrotyrosine (NT-modified alpha-Syn was detected readily in cervical lymph nodes (CLN from 1-methyl-4-phenyl-1,2,3,6-tetrahydropyridine (MPTP intoxicated mice. Antigen-presenting cells within the CLN showed increased surface expression of major histocompatibility complex class II, initiating the molecular machinery necessary for efficient antigen presentation. MPTP-treated mice produced antibodies to native and nitrated alpha-Syn. Mice immunized with the NT-modified C-terminal tail fragment of alpha-Syn, but not native protein, generated robust T cell proliferative and pro-inflammatory secretory responses specific only for the modified antigen. T cells generated against the nitrated epitope do not respond to the unmodified protein. Mice deficient in T and B lymphocytes were resistant to MPTP-induced neurodegeneration. Transfer of T cells from mice immunized with N-alpha-Syn led to a robust neuroinflammatory response with accelerated dopaminergic cell loss.These data show that NT modifications within alpha-Syn, can bypass or break immunological tolerance and activate peripheral leukocytes in draining lymphoid tissue. A novel mechanism for disease is made in that NT modifications in alpha-Syn induce adaptive immune responses that exacerbate PD pathobiology. These results have implications for both the pathogenesis and treatment of this disabling neurodegenerative disease.

  1. Synfograms: a new generation of holographic applications

    Science.gov (United States)

    Meulien Öhlmann, Odile; Öhlmann, Dietmar; Zacharovas, Stanislovas J.

    2008-04-01

    The new synthetic Four-dimensional printing technique (Syn4D) Synfogram is introducing time (animation) into spatial configuration of the imprinted three-dimensional shapes. While lenticular solutions offer 2 to 9 stereoscopic images Syn4D offers large format, full colors true 3D visualization printing of 300 to 2500 frames imprinted as holographic dots. This past 2 years Syn4D high-resolution displays proved to be extremely efficient for museums presentation, engineering design, automobile prototyping, and advertising virtual presentation as well as, for portrait and fashion applications. The main advantages of syn4D is that it offers a very easy way of using a variety of digital media, like most of 3D Modelling programs, 3D scan system, video sequences, digital photography, tomography as well as the Syn4D camera track system for life recording of spatial scenes changing in time. The use of digital holographic printer in conjunction with Syn4D image acquiring and processing devices separates printing and imaging creation in such a way that makes four-dimensional printing similar to a conventional digital photography processes where imaging and printing are usually separated in space and time. Besides making content easy to prepare, Syn4D has also developed new display and lighting solutions for trade show, museum, POP, merchandising, etc. The introduction of Synfograms is opening new applications for real life and virtual 4D displays. In this paper we will analyse the 3D market, the properties of the Synfograms and specific applications, the problems we encounter, solutions we find, discuss about customers demand and need for new product development.

  2. Dentate gyrus network dysfunctions precede the symptomatic phase in a genetic mouse model of seizures

    Directory of Open Access Journals (Sweden)

    Oana eToader

    2013-08-01

    Full Text Available Neuronal circuit disturbances that lead to hyperexcitability in the cortico-hippocampal network are one of the landmarks of temporal lobe epilepsy. The dentate gyrus (DG network plays an important role in regulating the excitability of the entire hippocampus by filtering and integrating information received via the perforant path. Here, we investigated possible epileptogenic abnormalities in the function of the DG neuronal network in the Synapsin II (Syn II knockout mouse (Syn II-/-, a genetic mouse model of epilepsy. Syn II is a presynaptic protein whose deletion in mice reproducibly leads to generalized seizures starting at the age of two months. We made use of a high-resolution microelectrode array (4096 electrodes and patch-clamp recordings, and found that in acute hippocampal slices of young pre-symptomatic (3-6 weeks-old Syn II-/- mice excitatory synaptic output of the mossy fibers is reduced. Moreover, we showed that the main excitatory neurons present in the polymorphic layer of the DG, hilar mossy cells, display a reduced excitability. We also provide evidence of a predominantly inhibitory regulatory output from mossy cells to granule cells, through feed-forward inhibition, and show that the excitatory-inhibitory ratio is increased in both pre-symptomatic and symptomatic Syn II-/- mice. These results support the key role of the hilar mossy neurons in maintaining the normal excitability of the hippocampal network and show that the late epileptic phenotype of the Syn II-/- mice is preceded by neuronal circuitry dysfunctions. Our data provide new insights into the mechanisms of epileptogenesis in the Syn II-/- mice and open the possibility for early diagnosis and therapeutic interventions.

  3. Analisi comparativa della dieta di alcuni carnivori opportunisti (Vulpes vulpes, Martes foina, Meles meles in Europa

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    Anna Maria De Marinis

    2003-10-01

    Full Text Available L'ecologia alimentare della volpe, del tasso ed in misura minore della faina è stata ampiamente studiata in diverse aree comprese all'interno degli areali di queste 3 specie. La variazione geografica delle abitudini alimentari di questi carnivori definiti opportunisti è al contrario decisamente poco nota. Scopo del presente lavoro è la descrizione della variazione della dieta di faina, tasso e volpe attraverso l'Europa ed in secondo luogo l'analisi comparativa delle strategie alimentari adottate da questi carnivori. Sono stati analizzati 19 studi per la volpe, 11 per la faina e 23 per il tasso. Sono stati presi in considerazione soltanto gli studi della durata di almeno un anno nei quali la composizione della dieta, determinata tramite analisi delle feci, fosse espressa in percentuale di volume o biomassa e le categorie alimentari fossero dettagliatamente descritte. Gli studi sono stati divisi in gruppi in base alla regione climatica di appartenenza (mediterranea, centroeuropea, atlantica e boreale. Le categorie alimentari utilizzate nell'analisi della variabilità geografica sono: mammiferi, uccelli, anfibi, artropodi, lombrichi, altro animale, frutta, cereali, rifiuti. L'analisi delle componenti principali, condotta separatamente sulle 3 specie, ha consentito l'individuazione su di un grafico bidimensionale di due gruppi riferibili all'Europa centro-settentrionale ed alla regione mediterranea, con una percentuale di variabilità spiegata > 76% per ognuna delle 3 specie. La composizione della dieta del primo gruppo risulta caratterizzata da elevate percentuali di mammiferi e secondariamente uccelli per la volpe, uccelli ed altro animale per la faina e lombrichi, cereali ed anfibi per il tasso. La composizione della dieta nella regione mediterranea risulta invece caratterizzata da elevate percentuali di artropodi e frutta per tutte e 3 le specie di carnivori. L'analisi dicriminante ha consentito di differenziare gli studi condotti in ambiente

  4. Cellular prion protein and γ-synuclein overexpression in LS 174T colorectal cancer cell drives endothelial proliferation-to-differentiation switch

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    Sing-Hui Ong

    2018-03-01

    Full Text Available Background Tumor-induced angiogenesis is an imperative event in pledging new vasculature for tumor metastasis. Since overexpression of neuronal proteins gamma-synuclein (γ-Syn and cellular prion protein (PrPC is always detected in advanced stages of cancer diseases which involve metastasis, this study aimed to investigate whether γ-Syn or PrPC overexpression in colorectal adenocarcinoma, LS 174T cells affects angiogenesis of endothelial cells, EA.hy 926 (EA. Methods EA cells were treated with conditioned media (CM of LS 174T-γ-Syn or LS 174T-PrP, and their proliferation, invasion, migration, adhesion and ability to form angiogenic tubes were assessed using a range of biological assays. To investigate plausible background mechanisms in conferring the properties of EA cells above, nitrite oxide (NO levels were measured and the expression of angiogenesis-related factors was assessed using a human angiogenesis antibody array. Results EA proliferation was significantly inhibited by LS 174T-PrP CM whereas its telomerase activity was reduced by CM of LS 174T-γ-Syn or LS 174T-PrP, as compared to EA incubated with LS 174T CM. Besides, LS 174T-γ-Syn CM or LS 174T-PrP CM inhibited EA invasion and migration in Boyden chamber assay. Furthermore, LS 174T-γ-Syn CM significantly inhibited EA migration in scratch wound assay. Gelatin zymography revealed reduced secretion of MMP-2 and MMP-9 by EA treated with LS 174T-γ-Syn CM or LS 174T-PrP CM. In addition, cell adhesion assay showed lesser LS 174T-γ-Syn or LS 174T-PrP cells adhered onto EA, as compared to LS 174T. In tube formation assay, LS 174T-γ-Syn CM or LS 174T-PrP CM induced EA tube formation. Increased NO secretion by EA treated with LS 174T-γ-Syn CM or LS 174T-PrP CM was also detected. Lastly, decreased expression of pro-angiogenic factors like CXCL16, IGFBP-2 and amphiregulin in LS 174T-γ-Syn CM or LS 174T-PrP CM was detected using the angiogenesis antibody array. Discussion These results

  5. Metabolic Syndrome, Strain, and Reduced Myocardial Function: Multi-Ethnic Study of Atherosclerosis

    Energy Technology Data Exchange (ETDEWEB)

    Almeida, André Luiz Cerqueira de, E-mail: andrealmeida@cardiol.br [Johns Hopkins University, Baltimore, MD (United States); Universidade Estadual de Feira de Santana, Bahia (Brazil); Teixido-Tura, Gisela; Choi, Eui-Young; Opdahl, Anders; Fernandes, Verônica R. S. [Johns Hopkins University, Baltimore, MD (United States); Wu, Colin O. [National Heart, Lung and Blood Institute, Bethesda, MD (United States); Bluemke, David A. [National Institutes of Health Clinical Center, National Institute for Biomedical Imaging and Bioengineering, Bethesda, MD (United States); Lima, João A. C. [Johns Hopkins University, Baltimore, MD (United States)

    2014-04-15

    Subclinical cardiovascular disease is prevalent in patients with Metabolic Syndrome (MetSyn). Left ventricular (LV) circumferential strain (ε{sub CC}) and longitudinal strain (ε{sub LL}), assessed by Speckle Tracking Echocardiography (STE), are indices of systolic function: shortening is indicated by negative strain, and thus, the more negative the strain, the better the LV systolic function. They have been used to demonstrate subclinical ventricular dysfunction in several clinical disorders. We hypothesized that MetSyn is associated with impaired myocardial function, as assessed by STE. We analyzed Multi-Ethnic Study of Atherosclerosis (MESA) participants who underwent STE and were evaluated for all MetSyn components. Among the 133 participants included [women: 63%; age: 65 ± 9 years (mean ± SD)], the prevalence of MetSyn was 31% (41/133). Individuals with MetSyn had lower ε{sub CC} and lower ε{sub LL} than those without MetSyn (-16.3% ± 3.5% vs. -18.4% ± 3.7%, p < 0.01; and -12.1% ± 2.5% vs. -13.9% ± 2.3%, p < 0.01, respectively). The LV ejection fraction (LVEF) was similar in both groups (p = 0.09). In multivariate analysis, MetSyn was associated with less circumferential myocardial shortening as indicated by less negative ε{sub CC} (B = 2.1%, 95%CI:0.6 3.5, p < 0.01) even after adjusting for age, ethnicity, LV mass, and LVEF). Likewise, presence of MetSyn (B = 1.3%, 95%CI:0.3 2.2, p < 0.01) and LV mass (B = 0.02%, 95% CI: 0.01-0.03, p = 0.02) were significantly associated with less longitudinal myocardial shortening as indicated by less negative ε{sub LL} after adjustment for ethnicity, LVEF, and creatinine. Left ventricular ε{sub CC} and ε{sub LL}, markers of subclinical cardiovascular disease, are impaired in asymptomatic individuals with MetSyn and no history of myocardial infarction, heart failure, and/or LVEF < 50%.

  6. Implementation of a Novel Algorithm For Generating Synthetic CT Images From Magnetic Resonance Imaging Data Sets for Prostate Cancer Radiation Therapy

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    Kim, Joshua, E-mail: jkim8@hfhs.org; Glide-Hurst, Carri; Doemer, Anthony; Wen, Ning; Movsas, Benjamin; Chetty, Indrin J.

    2015-01-01

    Purpose: To describe and evaluate a method for generating synthetic computed tomography (synCT) images from magnetic resonance simulation (MR-SIM) data for accurate digitally reconstructed radiograph (DRR) generation and dose calculations in prostate cancer radiation therapy. Methods and Materials: A retrospective evaluation was performed in 9 prostate cancer patients who had undergone MR-SIM in addition to CT simulation (CT-SIM). MR-SIM data were used to generate synCT images by using a novel, voxel-based weighted summation approach. A subset of patients was used for weight optimization, and the number of patients to use during optimization was determined. Hounsfield unit (HU) differences between CT-SIM and synCT images were analyzed via mean absolute error (MAE). Original, CT-based treatment plans were mapped onto synCTs. DRRs were generated, and agreement between CT and synCT-generated DRRs was evaluated via Dice similarity coefficient (DSC). Dose was recalculated, and dose-volume metrics and gamma analysis were used to evaluate resulting treatment plans. Results: Full field-of-view synCT MAE across all patients was 74.3 ± 10.9 HU with differences from CTs of 2.0 ± 8.1 HU and 11.9 ± 46.7 HU for soft tissue structures (prostate, bladder, and rectum) and femoral bones, respectively. Calculated DSCs for anterior-posterior and lateral DRRs were 0.90 ± 0.04 and 0.92 ± 0.05, respectively. Differences in D99%, mean dose, and maximum dose to the clinical target volume from CT-SIM dose calculations were 0.75% ± 0.35%, 0.63% ± 0.34%, and 0.54% ± 0.33%, respectively, for synCT-generated plans. Gamma analysis (2%/2 mm dose difference/distance to agreement) revealed pass rates of 99.9% ± 0.1% (range, 99.7%-100%). Conclusion: Generated synCTs enabled accurate DRR generation and dose computation for prostate MR-only simulation. Dose recalculated on synCTs agreed well with original planning distributions. Further validation using a larger patient

  7. Sphingosine-1-Phosphate (S1P) Impacts Presynaptic Functions by Regulating Synapsin I Localization in the Presynaptic Compartment.

    Science.gov (United States)

    Riganti, Loredana; Antonucci, Flavia; Gabrielli, Martina; Prada, Ilaria; Giussani, Paola; Viani, Paola; Valtorta, Flavia; Menna, Elisabetta; Matteoli, Michela; Verderio, Claudia

    2016-04-20

    Growing evidence indicates that sphingosine-1-P (S1P) upregulates glutamate secretion in hippocampal neurons. However, the molecular mechanisms through which S1P enhances excitatory activity remain largely undefined. The aim of this study was to identify presynaptic targets of S1P action controlling exocytosis. Confocal analysis of rat hippocampal neurons showed that S1P applied at nanomolar concentration alters the distribution of Synapsin I (SynI), a presynaptic phosphoprotein that controls the availability of synaptic vesicles for exocytosis. S1P induced SynI relocation to extrasynaptic regions of mature neurons, as well as SynI dispersion from synaptic vesicle clusters present at axonal growth cones of developing neurons. S1P-induced SynI relocation occurred in a Ca(2+)-independent but ERK-dependent manner, likely through the activation of S1P3 receptors, as it was prevented by the S1P3 receptor selective antagonist CAY1044 and in neurons in which S1P3 receptor was silenced. Our recent evidence indicates that microvesicles (MVs) released by microglia enhance the metabolism of endogenous sphingolipids in neurons and stimulate excitatory transmission. We therefore investigated whether MVs affect SynI distribution and whether endogenous S1P could be involved in the process. Analysis of SynI immunoreactivity showed that exposure to microglial MVs induces SynI mobilization at presynaptic sites and growth cones, whereas the use of inhibitors of sphingolipid cascade identified S1P as the sphingolipid mediating SynI redistribution. Our data represent the first demonstration that S1P induces SynI mobilization from synapses, thereby indicating the phosphoprotein as a novel target through which S1P controls exocytosis. Growing evidence indicates that the bioactive lipid sphingosine and its metabolite sphingosine-1-P (S1P) stimulate excitatory transmission. While it has been recently clarified that sphingosine influences directly the exocytotic machinery by activating the

  8. SU-F-303-12: Implementation of MR-Only Simulation for Brain Cancer: A Virtual Clinical Trial

    International Nuclear Information System (INIS)

    Glide-Hurst, C; Zheng, W; Kim, J; Wen, N; Chetty, I J

    2015-01-01

    Purpose: To perform a retrospective virtual clinical trial using an MR-only workflow for a variety of brain cancer cases by incorporating novel imaging sequences, tissue segmentation using phase images, and an innovative synthetic CT (synCT) solution. Methods: Ten patients (16 lesions) were evaluated using a 1.0T MR-SIM including UTE-DIXON imaging (TE = 0.144/3.4/6.9ms). Bone-enhanced images were generated from DIXON-water/fat and inverted UTE. Automated air segmentation was performed using unwrapped UTE phase maps. Segmentation accuracy was assessed by calculating intersection and Dice similarity coefficients (DSC) using CT-SIM as ground truth. SynCTs were generated using voxel-based weighted summation incorporating T2, FLAIR, UTE1, and bone-enhanced images. Mean absolute error (MAE) characterized HU differences between synCT and CT-SIM. Dose was recalculated on synCTs; differences were quantified using planar gamma analysis (2%/2 mm dose difference/distance to agreement) at isocenter. Digitally reconstructed radiographs (DRRs) were compared. Results: On average, air maps intersected 80.8 ±5.5% (range: 71.8–88.8%) between MR-SIM and CT-SIM yielding DSCs of 0.78 ± 0.04 (range: 0.70–0.83). Whole-brain MAE between synCT and CT-SIM was 160.7±8.8 HU, with the largest uncertainty arising from bone (MAE = 423.3±33.2 HU). Gamma analysis revealed pass rates of 99.4 ± 0.04% between synCT and CT-SIM for the cohort. Dose volume histogram analysis revealed that synCT tended to yield slightly higher doses. Organs at risk such as the chiasm and optic nerves were most sensitive due to their proximities to air/bone interfaces. DRRs generated via synCT and CT-SIM were within clinical tolerances. Conclusion: Our approach for MR-only simulation for brain cancer treatment planning yielded clinically acceptable results relative to the CT-based benchmark. While slight dose differences were observed, reoptimization of treatment plans and improved image registration can address

  9. Tauopathic changes in the striatum of A53T α-synuclein mutant mouse model of Parkinson's disease.

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    Jonathan Wills

    2011-03-01

    Full Text Available Tauopathic pathways lead to degenerative changes in Alzheimer's disease and there is evidence that they are also involved in the neurodegenerative pathology of Parkinson's disease [PD]. We have examined tauopathic changes in striatum of the α-synuclein (α-Syn A53T mutant mouse. Elevated levels of α-Syn were observed in striatum of the adult A53T α-Syn mice. This was accompanied by increases in hyperphosphorylated Tau [p-Tau], phosphorylated at Ser202, Ser262 and Ser396/404, which are the same toxic sites also seen in Alzheimer's disease. There was an increase in active p-GSK-3β, hyperphosphorylated at Tyr216, a major and primary kinase known to phosphorylate Tau at multiple sites. The sites of hyperphosphorylation of Tau in the A53T mutant mice were similar to those seen in post-mortem striata from PD patients, attesting to their pathophysiological relevance. Increases in p-Tau were not due to alterations on protein phosphatases in either A53T mice or in human PD, suggesting lack of involvement of these proteins in tauopathy. Extraction of striata with Triton X-100 showed large increases in oligomeric forms of α-Syn suggesting that α-Syn had formed aggregates the mutant mice. In addition, increased levels of p-GSK-3β and pSer396/404 were also found associated with aggregated α-Syn. Differential solubilization to measure protein binding to cytoskeletal proteins demonstrated that p-Tau in the A53T mutant mouse were unbound to cytoskeletal proteins, consistent with dissociation of p-Tau from the microtubules upon hyperphosphorylation. Interestingly, α-Syn remained tightly bound to the cytoskeleton, while p-GSK-3β was seen in the cytoskeleton-free fractions. Immunohistochemical studies showed that α-Syn, pSer396/404 Tau and p-GSK-3β co-localized with one another and was aggregated and accumulated into large inclusion bodies, leading to cell death of Substantia nigral neurons. Together, these data demonstrate an elevated state of

  10. Metabolic Syndrome, Strain, and Reduced Myocardial Function: Multi-Ethnic Study of Atherosclerosis

    International Nuclear Information System (INIS)

    Almeida, André Luiz Cerqueira de; Teixido-Tura, Gisela; Choi, Eui-Young; Opdahl, Anders; Fernandes, Verônica R. S.; Wu, Colin O.; Bluemke, David A.; Lima, João A. C.

    2014-01-01

    Subclinical cardiovascular disease is prevalent in patients with Metabolic Syndrome (MetSyn). Left ventricular (LV) circumferential strain (ε CC ) and longitudinal strain (ε LL ), assessed by Speckle Tracking Echocardiography (STE), are indices of systolic function: shortening is indicated by negative strain, and thus, the more negative the strain, the better the LV systolic function. They have been used to demonstrate subclinical ventricular dysfunction in several clinical disorders. We hypothesized that MetSyn is associated with impaired myocardial function, as assessed by STE. We analyzed Multi-Ethnic Study of Atherosclerosis (MESA) participants who underwent STE and were evaluated for all MetSyn components. Among the 133 participants included [women: 63%; age: 65 ± 9 years (mean ± SD)], the prevalence of MetSyn was 31% (41/133). Individuals with MetSyn had lower ε CC and lower ε LL than those without MetSyn (-16.3% ± 3.5% vs. -18.4% ± 3.7%, p < 0.01; and -12.1% ± 2.5% vs. -13.9% ± 2.3%, p < 0.01, respectively). The LV ejection fraction (LVEF) was similar in both groups (p = 0.09). In multivariate analysis, MetSyn was associated with less circumferential myocardial shortening as indicated by less negative ε CC (B = 2.1%, 95%CI:0.6 3.5, p < 0.01) even after adjusting for age, ethnicity, LV mass, and LVEF). Likewise, presence of MetSyn (B = 1.3%, 95%CI:0.3 2.2, p < 0.01) and LV mass (B = 0.02%, 95% CI: 0.01-0.03, p = 0.02) were significantly associated with less longitudinal myocardial shortening as indicated by less negative ε LL after adjustment for ethnicity, LVEF, and creatinine. Left ventricular ε CC and ε LL , markers of subclinical cardiovascular disease, are impaired in asymptomatic individuals with MetSyn and no history of myocardial infarction, heart failure, and/or LVEF < 50%

  11. Neuropeptide Treatment with Cerebrolysin Enhances the Survival of Grafted Neural Stem Cell in an α-Synuclein Transgenic Model of Parkinson's Disease

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    Edward Rockenstein

    2015-01-01

    Full Text Available Neuronal stem cell (NSC grafts have been investigated as a potential neuro-restorative therapy in Parkinson's disease (PD but their use is compromised by the death of grafted cells. We investigated the use of Cerebrolysin (CBL, a neurotrophic peptide mixture, as an adjunct to NSC therapy in the α-synuclein (α-syn transgenic (tg model of PD. In vehicle-treated α-syn tg mice, there was decreased survival of NSCs. In contrast, CBL treatment enhanced the survival of NSCs in α-syn tg groups and ameliorated behavioral deficits. The grafted NSCs showed lower levels of terminal deoxynucleotidyl transferase dUTP nick end labeling positive cells in the CBL-treated mice when compared with vehicle-treated α-syn tg mice. No evidence of tumor growth was detected. Levels of α-syn were similar in the vehicle in CBL-treated tg mice. In conclusion, CBL treatment might be a potential adjuvant for therapeutic NSC grafting in PD.

  12. New data on tectono-metamorphic evolution of the Peri-Trasmontano domain (Schistose Domain) in Northeastern Portugal

    International Nuclear Information System (INIS)

    Dias da Silva, I.; Gonzalez Clavijo, E.

    2010-01-01

    Under the main Tras-os-Montes thrust plane, in the easternmost region of the Morais Allochthonous Complex, a geologic unit has been identified. It shows syn-tectonic S 2 -related andalusite blastesis, representative of low pressure thermal metamorphism. In the studied sector this metamorphism affects essentially the black slaty lithologies present in Neoproterozoic to Silurian formations. This kind of thermal metamorphism is easily distinguishable from the late to post S 3 plutonic-related metamorphism, due to the existence of evidence of syn kinematic mineral blastesis with rotation and boudinage, synchronously with S 2 development. Syn-kinematic andalusite blastesis seems to affect only the autochthonous Central Iberian Zone rocks and it could be associated to crustal extensional phenomena like the ones identified in the Tormes Gneissic Dome. It is proposed that at least part of this andalusite blast generation could have a distinct origin, reflecting earlier low pressure thermal metamorphic events in inner Variscan orogen zones that were tectonically imbricated to present coordinates during the second Variscan phase. The vertical proximity of only a few hundred meters between extensional structures, to the East, and the compressive ones, to the West of the studied sector, could justify the presence of both pre- and syn-S 2 andalusite blasts inside the above mentioned tectono-metamorphic unit. The kinematic criteria (top to SE) are consistent with the ones of the Variscan synorogenic extensional structures placed nearby to the SE, pointing to a possible genetic relation with those crustal thinning processes. (Author) 42 refs.

  13. The Parkinson’s disease-associated protein α-synuclein disrupts stress signaling – a possible implication for methamphetamine use?

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    Shaoxiao Wang

    2014-03-01

    Full Text Available The human neuronal protein α-synuclein (α-syn has been linked by a plethora of studies as a causative factor in sporadic Parkinson’s disease (PD. To speed the pace of discovery about the biology and pathobiology of α-syn, organisms such as yeast, worms, and flies have been used to investigate the mechanisms by which elevated levels of α-syn are toxic to cells and to screen for drugs and genes that suppress this toxicity. We recently reported [Wang et al. Proc. Natl. Acad. Sci.(2012 109: 16119–16124] that human α-syn, at high expression levels, disrupts stress-activated signal transduction pathways in both yeast and human neuroblastoma cells. Disruption of these signaling pathways ultimately leads to vulnerability to stress and to cell death. Here we discuss how the disruption of cell signaling by α-syn may have relevance to the parkinsonism that is associated with the abuse of the drug methamphetamine (meth.

  14. ESCRT-mediated uptake and degradation of brain-targeted α-synuclein single chain antibody attenuates neuronal degeneration in vivo.

    Science.gov (United States)

    Spencer, Brian; Emadi, Sharareh; Desplats, Paula; Eleuteri, Simona; Michael, Sarah; Kosberg, Kori; Shen, Jay; Rockenstein, Edward; Patrick, Christina; Adame, Anthony; Gonzalez, Tania; Sierks, Michael; Masliah, Eliezer

    2014-10-01

    Parkinson's disease and dementia with Lewy bodies are neurodegenerative disorders characterized by accumulation of α-synuclein (α-syn). Recently, single-chain fragment variables (scFVs) have been developed against individual conformational species of α-syn. Unlike more traditional monoclonal antibodies, these scFVs will not activate or be endocytosed by Fc receptors. For this study, we investigated an scFV directed against oligomeric α-syn fused to the LDL receptor-binding domain from apolipoprotein B (apoB). The modified scFV showed enhanced brain penetration and was imported into neuronal cells through the endosomal sorting complex required for transport (ESCRT) pathway, leading to lysosomal degradation of α-syn aggregates. Further analysis showed that the scFV was effective at ameliorating neurodegenerative pathology and behavioral deficits observed in the mouse model of dementia with Lewy bodies/Parkinson's disease. Thus, the apoB modification had the effect of both increasing accumulation of the scFV in the brain and directing scFV/α-syn complexes for degradation through the ESCRT pathway, leading to improved therapeutic potential of immunotherapy.

  15. Curcumin Modulates α-Synuclein Aggregation and Toxicity

    Science.gov (United States)

    2012-01-01

    In human beings, Parkinson’s disease (PD) is associated with the oligomerization and amyloid formation of α-synuclein (α-Syn). The polyphenolic Asian food ingredient curcumin has proven to be effective against a wide range of human diseases including cancers and neurological disorders. While curcumin has been shown to significantly reduce cell toxicity of α-Syn aggregates, its mechanism of action remains unexplored. Here, using a series of biophysical techniques, we demonstrate that curcumin reduces toxicity by binding to preformed oligomers and fibrils and altering their hydrophobic surface exposure. Further, our fluorescence and two-dimensional nuclear magnetic resonance (2D-NMR) data indicate that curcumin does not bind to monomeric α-Syn but binds specifically to oligomeric intermediates. The degree of curcumin binding correlates with the extent of α-Syn oligomerization, suggesting that the ordered structure of protein is required for effective curcumin binding. The acceleration of aggregation by curcumin may decrease the population of toxic oligomeric intermediates of α-Syn. Collectively; our results suggest that curcumin and related polyphenolic compounds can be pursued as candidate drug targets for treatment of PD and other neurological diseases. PMID:23509976

  16. The Neuroprotective Role of Protein Quality Control in Halting the Development of Alpha-Synuclein Pathology

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    Destiny-Love Manecka

    2017-09-01

    Full Text Available Synucleinopathies are a family of neurodegenerative disorders that comprises Parkinson’s disease, dementia with Lewy bodies, and multiple system atrophy. Each of these disorders is characterized by devastating motor, cognitive, and autonomic consequences. Current treatments for synucleinopathies are not curative and are limited to improvement of quality of life for affected individuals. Although the underlying causes of these diseases are unknown, a shared pathological hallmark is the presence of proteinaceous inclusions containing the α-synuclein (α-syn protein in brain tissue. In the past few years, it has been proposed that these inclusions arise from the self-templated, prion-like spreading of misfolded and aggregated forms of α-syn throughout the brain, leading to neuronal dysfunction and death. In this review, we describe how impaired protein homeostasis is a prominent factor in the α-syn aggregation cascade, with alterations in protein quality control (PQC pathways observed in the brains of patients. We discuss how PQC modulates α-syn accumulation, misfolding and aggregation primarily through chaperoning activity, proteasomal degradation, and lysosome-mediated degradation. Finally, we provide an overview of experimental data indicating that targeting PQC pathways is a promising avenue to explore in the design of novel neuroprotective approaches that could impede the spreading of α-syn pathology and thus provide a curative treatment for synucleinopathies.

  17. A new species of Voria Robineau-Desvoidy (Diptera: Tachinidae) from Area de Conservación Guanacaste in northwestern Costa Rica.

    Science.gov (United States)

    Fleming, A J; Wood, D Monty; Smith, M Alex; Dapkey, Tanya; Hallwachs, Winnie; Janzen, Daniel

    2017-01-01

    We describe a new species in the genus Voria Robineau-Desvoidy, 1830 (Diptera: Tachinidae: Voriini) from Area de Conservación Guanacaste (ACG) in northwestern Costa Rica. It was reared as part of an ongoing inventory of wild-caught caterpillars spanning a variety of moth and butterfly families (Lepidoptera). Our study provides a concise description of the new species using morphology, life history, molecular data, and photographic documentation. In addition to the new species, we provide a diagnosis of the genus as well as new data relating to host use. The following new species of Voria is described: Voria erasmocoronadoi Fleming & Wood sp. n. The following are proposed by Fleming & Wood as new synonyms of Voria : Xenoplagia Townsend, 1914 syn. n. , Hystricovoria Townsend, 1928 syn. n. , Afrovoria Curran, 1938 syn. n. , and Anavoria Mesnil, 1953 syn. n. , and Itavoria Townsend, 1931 syn. n. The following new combinations are proposed as a result of the new synonymies: Voria bakeri (Townsend, 1928), comb. n. and Voria setosa (Townsend, 1914), comb. n. The authors also propose Voria pollyclari (Rocha-e-Silva, Lopes & Della Lucia, 1999), comb. n. based on the morphology of the holotype.

  18. Five-year trends of selected halogenated flame retardants in the atmosphere of Northeast China

    Energy Technology Data Exchange (ETDEWEB)

    Li, Wen-Long; Liu, Li-Yan; Song, Wei-Wei; Zhang, Zi-Feng; Qiao, Li-Na [International Joint Research Center for Persistent Toxic Substances (IJRC-PTS), State Key Laboratory of Urban Water Resource and Environment, Harbin Institute of Technology, Harbin 150090 (China); Ma, Wan-Li, E-mail: mawanli002@163.com [International Joint Research Center for Persistent Toxic Substances (IJRC-PTS), State Key Laboratory of Urban Water Resource and Environment, Harbin Institute of Technology, Harbin 150090 (China); Li, Yi-Fan, E-mail: ijrc_pts_paper@yahoo.com [International Joint Research Center for Persistent Toxic Substances (IJRC-PTS), State Key Laboratory of Urban Water Resource and Environment, Harbin Institute of Technology, Harbin 150090 (China); IJRC-PTS-NA, Toronto M2N 6X9 (Canada)

    2016-01-01

    This study collected 227 pairs of gas phase and particle phase air samples in a typical urban city of Northeast China from 2008 to 2013. Four alternative halogenated flame retardants for polybrominated diphenyl ethers (PBDEs) were analyzed, namely 2-ethylhexyl 2,3,4,5-tetrabromobenzoate (EHTBB), bis (2-ethylhexyl) tetrabromophthalate (BEHTBP), syn-dechlorane plus (syn-DP) and anti-dechlorane plus (anti-DP). The average concentrations for EHTBB and BEHTBP were 5.2 ± 20 and 30 ± 200 pg/m{sup 3}, respectively, while for syn-DP and anti-DP were 1.9 ± 5.1 and 5.8 ± 18 pg/m{sup 3}, respectively. Generally, they were frequently detected in the particle phase, and the gas/particle partitioning suggested they were the maximum partition chemicals. The fractional abundance of EHTBB (f{sub EHTBB}) and syn-DP (f{sub syn}) were comparable with those in other studies. Strong local sources were identified based on the air parcel backward trajectories and the potential source contribution function. The concentrations of these chemicals were significantly increased during this sampling campaign, possibly suggesting their increasing usages from 2008 to 2013 in China. - Highlights: • Five-year air samples were analyzed for four alternative HFRs. • BEHTBP and DP were frequently detected in the particle phase. • Local and nearby city sources of these HFRs were suggested. • Concentrations of these HFRs were significantly increased in the five-year period.

  19. The Pomatocalpa maculosum Complex (Orchidaceae Resolved by Multivariate Morphometric Analysis

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    Santi Watthana

    2006-03-01

    Full Text Available Principal components analysis (PCA was employed to analyse the morphological variation among 63 herbarium specimens tentatively identified as Pomatocalpa andamanicum (Hook.f. J. J. Sm., P. koordersii (Rolfe J. J. Sm., P. latifolium (Lindl. J. J. Sm., P. linearifolium Seidenf., P. maculosum (Lindl. J. J. Sm., P. marsupiale (Kraenzl. J. J. Sm., P. naevatum J. J. Sm., or P. siamense (Rolfe ex Downie Summerh. Thirty-seven quantitative and 5 binary characters were included in the analyses. Taxa were delimited according to the observed clustering of specimens in the PCA plots, diagnostic characters were identified, and the correct nomenclature was established through examination of type material. Four species could be recognized viz, P. diffusum Breda (syn. P. latifolium, P. fuscum (Lindl. J. J. Sm. (syn. P. latifolium, P. marsupiale (syn. P. koordersii and P. maculosum. For the latter species, two subspecies could be recognized, viz P. maculosum (Lindl. J. J. Sm. subsp. maculosum (syn. P. maculosum, P. naevatum p.p. and P. maculosum (Lindl. J. J. Sm. subsp. andamanicum (Hook.f. S. Watthana (syn. P. andamanicum, P. linearifolium, P. siamense, P. naevatum p.p.. An identification key and a taxonomic synopsis are provided.

  20. Rethinking risk assessment for emerging technology first-in-human trials.

    Science.gov (United States)

    Genske, Anna; Engel-Glatter, Sabrina

    2016-03-01

    Recent progress in synthetic biology (SynBio) has enabled the development of novel therapeutic opportunities for the treatment of human disease. In the near future, first-in-human trials (FIH) will be indicated. FIH trials mark a key milestone in the translation of medical SynBio applications into clinical practice. Fostered by uncertainty of possible adverse events for trial participants, a variety of ethical concerns emerge with regards to SynBio FIH trials, including 'risk' minimization. These concerns are associated with any FIH trial, however, due to the novelty of the approach, they become more pronounced for medical applications of emerging technologies (emTech) like SynBio. To minimize potential harm for trial participants, scholars, guidelines, regulations and policy makers alike suggest using 'risk assessment' as evaluation tool for such trials. Conversely, in the context of emTech FIH trials, we believe it to be at least questionable to contextualize uncertainty of potential adverse events as 'risk' and apply traditional risk assessment methods. Hence, this issue needs to be discussed to enable alterations of the evaluation process before the translational phase of SynBio applications begins. In this paper, we will take the opportunity to start the debate and highlight how a misunderstanding of the concept of risk, and the possibilities and limitations of risk assessment, respectively, might impair decision-making by the relevant regulatory authorities and research ethics committees, and discuss possible solutions to tackle the issue.

  1. Chronic Caffeine Treatment Protects Against α-Synucleinopathy by Reestablishing Autophagy Activity in the Mouse Striatum.

    Science.gov (United States)

    Luan, Yanan; Ren, Xiangpeng; Zheng, Wu; Zeng, Zhenhai; Guo, Yingzi; Hou, Zhidong; Guo, Wei; Chen, Xingjun; Li, Fei; Chen, Jiang-Fan

    2018-01-01

    Despite converging epidemiological evidence for the inverse relationship of regular caffeine consumption and risk of developing Parkinson's disease (PD) with animal studies demonstrating protective effect of caffeine in various neurotoxin models of PD, whether caffeine can protect against mutant α-synuclein (α-Syn) A53T-induced neurotoxicity in intact animals has not been examined. Here, we determined the effect of chronic caffeine treatment using the α-Syn fibril model of PD by intra-striatal injection of preformed A53T α-Syn fibrils. We demonstrated that chronic caffeine treatment blunted a cascade of pathological events leading to α-synucleinopathy, including pSer129α-Syn-rich aggregates, apoptotic neuronal cell death, microglia, and astroglia reactivation. Importantly, chronic caffeine treatment did not affect autophagy processes in the normal striatum, but selectively reversed α-Syn-induced defects in macroautophagy (by enhancing microtubule-associated protein 1 light chain 3, and reducing the receptor protein sequestosome 1, SQSTM1/p62) and chaperone-mediated autophagy (CMA, by enhancing LAMP2A). These findings support that caffeine-a strongly protective environment factor as suggested by epidemiological evidence-may represent a novel pharmacological therapy for PD by targeting autophagy pathway.

  2. The genus Macroteleia Westwood (Hymenoptera, Platygastridae s. l., Scelioninae from China

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    Chen Huayan

    2013-05-01

    Full Text Available The genus Macroteleia Westwood (Hymenoptera: Platygastridae s. l., Scelioninae from China is revised. Seventeen species are recognized based on 502 specimens, all of which are new records for China. Seven new species are described: M. carinigena sp. n. (China, M. flava sp. n. (China, M. gracilis sp. n. (China, M. salebrosa sp. n. (China, M. semicircula sp. n. (China, M. spinitibia sp. n. (China and M. striatipleuron sp. n. (China. Ten species are redescribed: M. boriviliensis Saraswat (China, India, Thailand, M. crawfordi Kiefer, stat. n. (China, Philippines, Thailand, Vietnam, M. dolichopa Sharma (China, India, Vietnam, M. emarginata Dodd (China, Malaysia, M. indica Saraswat & Sharma (China, India, Vietnam, M. lamba Saraswat & Sharma (China, India, Thailand, Vietnam, M. livingstoni Saraswat (China, India, M. peliades Kozlov & Lê (China, Vietnam, M. rufa Szelényi (China, Egypt, Georgia, Russia, Thailand, Ukraine and M. striativentris Crawford (China, Philippines, Thailand, Vietnam. The following five new synonyms are proposed: M. crates Kozlov & Lê syn. n. and M. demades Kozlov & Lê syn. n. of M. crawfordi Kieffer; M. cebes Kozlov & Lê syn. n. and M. dones Kozlov & Lê syn. n. of M. indica Saraswat & Sharma; M. dores Kozlov & Lê syn. n. of M. lamba Saraswat & Sharma. A key to the Chinese species of the genus is provided.

  3. α-Synuclein-induced lysosomal dysfunction occurs through disruptions in protein trafficking in human midbrain synucleinopathy models.

    Science.gov (United States)

    Mazzulli, Joseph R; Zunke, Friederike; Isacson, Ole; Studer, Lorenz; Krainc, Dimitri

    2016-02-16

    Parkinson's disease (PD) is an age-related neurodegenerative disorder characterized by the accumulation of protein aggregates comprised of α-synuclein (α-syn). A major barrier in treatment discovery for PD is the lack of identifiable therapeutic pathways capable of reducing aggregates in human neuronal model systems. Mutations in key components of protein trafficking and cellular degradation machinery represent important risk factors for PD; however, their precise role in disease progression and interaction with α-syn remains unclear. Here, we find that α-syn accumulation reduced lysosomal degradation capacity in human midbrain dopamine models of synucleinopathies through disrupting hydrolase trafficking. Accumulation of α-syn at the cell body resulted in aberrant association with cis-Golgi-tethering factor GM130 and disrupted the endoplasmic reticulum-Golgi localization of rab1a, a key mediator of vesicular transport. Overexpression of rab1a restored Golgi structure, improved hydrolase trafficking and activity, and reduced pathological α-syn in patient neurons. Our work suggests that enhancement of lysosomal hydrolase trafficking may prove beneficial in synucleinopathies and indicates that human midbrain disease models may be useful for identifying critical therapeutic pathways in PD and related disorders.

  4. Transcriptional profiling of striatal neurons in response to single or concurrent activation of dopamine D2, adenosine A(2A) and metabotropic glutamate type 5 receptors: focus on beta-synuclein expression.

    Science.gov (United States)

    Canela, Laia; Selga, Elisabet; García-Martínez, Juan Manuel; Amaral, Olavo B; Fernández-Dueñas, Víctor; Alberch, Jordi; Canela, Enric I; Franco, Rafael; Noé, Véronique; Lluís, Carme; Ciudad, Carlos J; Ciruela, Francisco

    2012-10-25

    G protein-coupled receptor oligomerization is a concept which is changing the understanding of classical pharmacology. Both, oligomerization and functional interaction between adenosine A(2A,) dopamine D(2) and metabotropic glutamate type 5 receptors have been demonstrated in the striatum. However, the transcriptional consequences of receptors co-activation are still unexplored. We aim here to determine the changes in gene expression of striatal primary cultured neurons upon isolated or simultaneous receptor activation. Interestingly, we found that 95 genes of the total analyzed (15,866 transcripts and variants) changed their expression in response to simultaneous stimulation of all three receptors. Among these genes, we focused on the β-synuclein (β-Syn) gene (SCNB). Quantitative PCR verified the magnitude and direction of change in expression of SCNB. Since β-Syn belongs to the homologous synuclein family and may be considered a natural regulator of α-synuclein (α-Syn), it has been proposed that β-Syn might act protectively against α-Syn neuropathology. Copyright © 2012 Elsevier B.V. All rights reserved.

  5. Neural substrates of semantic relationships: common and distinct left-frontal activities for generation of synonyms vs. antonyms.

    Science.gov (United States)

    Jeon, Hyeon-Ae; Lee, Kyoung-Min; Kim, Young-Bo; Cho, Zang-Hee

    2009-11-01

    Synonymous and antonymous relationships among words may reflect the organization and/or processing in the mental lexicon and its implementation in the brain. In this study, functional magnetic resonance imaging (fMRI) is employed to compare brain activities during generation of synonyms (SYN) and antonyms (ANT) prompted by the same words. Both SYN and ANT, when compared with reading nonwords (NW), activated a region in the left middle frontal gyrus (BA 46). Neighboring this region, there was a dissociation observed in that the ANT activation extended more anteriorly and laterally to the SYN activation. The activations in the left middle frontal gyrus may be related to mental processes that are shared in the SYN and ANT generations, such as engaging semantically related parts of mental lexicon for the word search, whereas the distinct activations unique for either SYN or ANT generation may reflect the additional component of antonym retrieval, namely, reversing the polarity of semantic relationship in one crucial dimension. These findings suggest that specific components in the semantic processing, such as the polarity reversal for antonym generation and the similarity assessment for synonyms, are separately and systematically laid out in the left-frontal cortex.

  6. Essential Oils May Lead α-Synuclein towards Toxic Fibrils Formation

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    Dina Morshedi

    2016-01-01

    Full Text Available α-Synuclein (α-Syn fibrillation links with Parkinson’s disease (PD and several related syndromes. It is believed that exposure to the factors which promote fibrillation may induce and progress such neurodegenerative diseases (NDs. Herein, the effects of some wildly used essential oils including Myrtus communis (M. communis on α-Syn fibrillation were examined. M. communis particularly increased α-Syn fibrillation in a concentration dependent manner. Given that applications of M. communis are very extensive in Asian societies, especially Zoroastrians, this study was extended towards its role on α-Syn fibrillation/cytotoxicity. By using a unilamellar vesicle, it was shown that the aggregated species with tendency to perturb membrane were increased in the presence of M. communis. In this regard, the cytotoxicity of α-Syn on SH-SH5Y cells was also increased significantly. Inappropriately, the effects of fibrillation inhibitors, baicalein and cuminaldehyde, were modulated in the presence of M. communis. However, major components of M. communis did not induce fibrillation and also the effect of M. communis was limited on other fibrinogenic proteins. Assuming that essential oils have the ability to pass through the blood brain barrier (BBB along with the popular attention on aromatherapy for the incurable ND, these findings suggest an implementation of fibrillation tests for essential oils.

  7. Tecniche integrate di rilievo per la comprensione di contesti archeologici e paesaggistici: note metodologiche per un approccio multi-scalare.

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    Giorgio Verdiani

    2017-12-01

    Full Text Available   Il patrimonio archeologico dell’area mediterranea è una delle manifestazioni più intense della volontà delle molte società che popolano questa zona fin dall’antichità. È un patrimonio culturale complesso e articolato che presenta enigmi difficili e possibilità impressionanti. Ciò crea la necessità di una comprensione accurata del soggetto della ricostruzione, delle sue connessioni e del suo contesto. In questo viaggio alla conoscenza, il “disegno” è il principale strumento di guida e operazione, dai primi schizzi al modello virtuale finale è il modo per scoprire le tracce della trama originale, la cosa per suggerire possibili soluzioni. Basando le sue considerazioni su dodici anni di indagini digitali e vari tentativi di ricostruzione digitale, questo contributo proporrà una discussione e definirà un percorso per questo tipo di procedure architettoniche specifiche nell’era digitale.

  8. Simultaneous determination of non-steroidal anti-inflammatory drugs in pharmaceutical formulations and human serum by reversed phase high performance liquid chromatography

    Directory of Open Access Journals (Sweden)

    Muhammad Nawaz

    2012-01-01

    Full Text Available A rapid and sensitive method using high performance liquid chromatography has been developed and validated for the simultaneous determination of non-steroidal anti-inflammatory drugs (NSAIDs in pharmaceutical formulations and human serum. Six NSAIDs including: naproxen sodium, diclofenac sodium, meloxicam, flurbiprofen, tiaprofenic and mefenamic acid were analyzed simultaneously in presence of ibuprofen as internal standard on Mediterranea C18 (5 µm, 250 x 0.46 mm column. Mobile phase comprised of methanol: acetonitrile: H2O (60:20:20, v/v; pH 3.35 and pumped at a flow rate of 1 mL min-1 using 265 nm UV detection. The method was linear over a concentration range of 0.25-50 µg mL-1 (r² = 0.9999.

  9. Diversity of Cyanobacteria in the Zasavica river, Serbia

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    Predojević Dragana

    2015-01-01

    Full Text Available Cyanobacteria are ancient organisms that are capable of colonizing different habitats in various climatic zones due to their plasticity and rapid accommodation. They are a widely studied group of microorganisms due to the presence of many potentially toxic and invasive species. The aim of this research was a diversity exploration of the freshwater Cyanobacteria in the Zasavica River, which is part of the Special Nature Reserve “Zasavica” in Serbia. Organisms were sampled once a month at two study sites during one year. Phytoplankton and metaphyton analysis showed the presence of 50 freshwater cyanobacterial taxa, of which 12 are new taxa for Serbia. Three invasive and potentially toxic species (Cylindrospermopsis raciborskii, Sphaerospermopsis aphanizomenoides and Raphidiopsis mediterranea were recorded only in metaphyton in April at one site. It can be expected that, if conditions change, this species can migrate and form phytoplankton blooms. [Projekat Ministarstva nauke Republike Srbije, br. ON 176020

  10. El surrealism de la poesía Lorquiana y su interpretación

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    Branka Kalenić Ramšak

    2001-12-01

    Full Text Available Federico García Lorca, pasados los cien años de su nacimiento, sigue siendo uno de los poetas españoles mas conocidos, traducidos, leídos y recitados en el mundo. Su imagen de juglar moderno se ha convertido en un fenómeno cultural hispánico, o mejor dicho, en uno de los tópicos españoles. Su obra poética ha ido cobrando a lo largo de este siglo dimensiones de una obra clásica española, comparable a la de Cervantes, de Lope de Vega o de Luis de Góngora. Su lenguaje poético, brotado de la vieja tierra mediterranea, nos ha hechizado a todos y su metáfora presagiosa todavia nos estremece al hacernos sentir el misterio de la vida y de la muerte.

  11. Transcriptome Analysis of the Planarian Eye Identifies ovo as a Specific Regulator of Eye Regeneration

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    Sylvain W. Lapan

    2012-08-01

    Full Text Available Among the millions of invertebrate species with visual systems, the genetic basis of eye development and function is well understood only in Drosophila melanogaster. We describe an eye transcriptome for the planarian Schmidtea mediterranea. Planarian photoreceptors expressed orthologs of genes required for phototransduction and microvillus structure in Drosophila and vertebrates, and optic pigment cells expressed solute transporters and melanin synthesis enzymes similar to those active in the vertebrate retinal pigment epithelium. Orthologs of several planarian eye genes, such as bestrophin-1 and Usher syndrome genes, cause eye defects in mammals when perturbed and were not previously described to have roles in invertebrate eyes. Five previously undescribed planarian eye transcription factors were required for normal eye formation during head regeneration. In particular, a conserved, transcription-factor-encoding ovo gene was expressed from the earliest stages of eye regeneration and was required for regeneration of all cell types of the eye.

  12. A functional genomics screen in planarians reveals regulators of whole-brain regeneration

    Science.gov (United States)

    Roberts-Galbraith, Rachel H; Brubacher, John L; Newmark, Phillip A

    2016-01-01

    Planarians regenerate all body parts after injury, including the central nervous system (CNS). We capitalized on this distinctive trait and completed a gene expression-guided functional screen to identify factors that regulate diverse aspects of neural regeneration in Schmidtea mediterranea. Our screen revealed molecules that influence neural cell fates, support the formation of a major connective hub, and promote reestablishment of chemosensory behavior. We also identified genes that encode signaling molecules with roles in head regeneration, including some that are produced in a previously uncharacterized parenchymal population of cells. Finally, we explored genes downregulated during planarian regeneration and characterized, for the first time, glial cells in the planarian CNS that respond to injury by repressing several transcripts. Collectively, our studies revealed diverse molecules and cell types that underlie an animal’s ability to regenerate its brain. DOI: http://dx.doi.org/10.7554/eLife.17002.001 PMID:27612384

  13. Effect of crude seaweed extracts on seed germination, seedling growth and some metabolic processes of Vicia faba L.

    Science.gov (United States)

    el-Sheekh, M M; el-Saied A el-D

    2000-01-01

    Crude extracts from three green seaweeds (Cladophora dalmatica, Enteromorpha intestinalis, Ulva lactuca) and the three red algae (Corallina mediterranea, Jania rubens, Pterocladia pinnate) were prepared. Their effects on germination, growth of seedlings, chlorophyll content and other metabolic activities of Vicia faba were investigated. The crude extract of C. dalmatica showed maximal activity, and it increased seed germination, length of main root and shoot systems and the number of lateral roots. All the crude extracts of seaweed increased protein content in both root and shoot systems, total soluble sugars and chlorophyll content in leaves. The cytokinin content of the green algae was higher than that in red algae. Growth of seedlings of V. faba was stimulated but to different degrees.

  14. Older and More Recent Observations on Esca : A Critical Overview

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    G. Surico

    2006-04-01

    Full Text Available The main research findings of studies in esca carried out over the last few years in a number of laboratories are discussed. The topics include: the disease model; the relationship between black dead arm and esca; the role of toxins and xylem cavitation in the development of leaf symptoms; the artificial reproduction of leaf symptoms and wood rot; the inoculum sources of the fungi Phaeomoniella chlamydospora, Phaeoacremonium aleophilum and Fomitiporia mediterranea, and the influence of climate on the incidence of esca. The purpose was to sum up the current state of esca research and where possible to present new suggestions and sometimes alternatives to the suggestions of other researchers. The ultimate aim was to draw attention to those questions in esca research that are open to differing and even opposing explanations because the hard data are still lacking.

  15. D Modeling with Photogrammetry by Uavs and Model Quality Verification

    Science.gov (United States)

    Barrile, V.; Bilotta, G.; Nunnari, A.

    2017-11-01

    This paper deals with a test lead by Geomatics laboratory (DICEAM, Mediterranea University of Reggio Calabria), concerning the application of UAV photogrammetry for survey, monitoring and checking. The study case relies with the surroundings of the Department of Agriculture Sciences. In the last years, such area was interested by landslides and survey activities carried out to take the phenomenon under control. For this purpose, a set of digital images were acquired through a UAV equipped with a digital camera and GPS. Successively, the processing for the production of a 3D georeferenced model was performed by using the commercial software Agisoft PhotoScan. Similarly, the use of a terrestrial laser scanning technique allowed to product dense cloud and 3D models of the same area. To assess the accuracy of the UAV-derived 3D models, a comparison between image and range-based methods was performed.

  16. 3D MODELING WITH PHOTOGRAMMETRY BY UAVS AND MODEL QUALITY VERIFICATION

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    V. Barrile

    2017-11-01

    Full Text Available This paper deals with a test lead by Geomatics laboratory (DICEAM, Mediterranea University of Reggio Calabria, concerning the application of UAV photogrammetry for survey, monitoring and checking. The study case relies with the surroundings of the Department of Agriculture Sciences. In the last years, such area was interested by landslides and survey activities carried out to take the phenomenon under control. For this purpose, a set of digital images were acquired through a UAV equipped with a digital camera and GPS. Successively, the processing for the production of a 3D georeferenced model was performed by using the commercial software Agisoft PhotoScan. Similarly, the use of a terrestrial laser scanning technique allowed to product dense cloud and 3D models of the same area. To assess the accuracy of the UAV-derived 3D models, a comparison between image and range-based methods was performed.

  17. Transcriptome analysis of the planarian eye identifies ovo as a specific regulator of eye regeneration.

    Science.gov (United States)

    Lapan, Sylvain W; Reddien, Peter W

    2012-08-30

    Among the millions of invertebrate species with visual systems, the genetic basis of eye development and function is well understood only in Drosophila melanogaster. We describe an eye transcriptome for the planarian Schmidtea mediterranea. Planarian photoreceptors expressed orthologs of genes required for phototransduction and microvillus structure in Drosophila and vertebrates, and optic pigment cells expressed solute transporters and melanin synthesis enzymes similar to those active in the vertebrate retinal pigment epithelium. Orthologs of several planarian eye genes, such as bestrophin-1 and Usher syndrome genes, cause eye defects in mammals when perturbed and were not previously described to have roles in invertebrate eyes. Five previously undescribed planarian eye transcription factors were required for normal eye formation during head regeneration. In particular, a conserved, transcription-factor-encoding ovo gene was expressed from the earliest stages of eye regeneration and was required for regeneration of all cell types of the eye. Copyright © 2012 The Authors. Published by Elsevier Inc. All rights reserved.

  18. Integrative Taxonomic Study of the Purse Crab Genus Persephona Leach, 1817 (Brachyura: Leucosiidae): Combining Morphology and Molecular Data

    Science.gov (United States)

    Magalhães, Tatiana; Robles, Rafael; Felder, Darryl L.

    2016-01-01

    Marine crabs of the genus Persephona Leach, 1817 are restricted to American waters of the western Atlantic and eastern Pacific Oceans. Subfamilial assignment of this taxon has varied between authors and its species composition remain in question. We conducted a comparative study based on morphology and molecular phylogenetics for all ten recognized species of Persephona, along with Iliacantha hancocki. We tested whether Persephona finneganae, P. lichtensteinii, and P. crinita represent a single species as suggested by some authors; whether specimens identified as P. punctata, P. mediterranea, and P. aquilonaris warrant treatment as separate species; and whether I. hancocki should be regarded as a junior synonym of P. subovata. Diagnostic morphological characters (of the carapace, chelipeds, and third maxillipeds) were used along with gonopod (male first pleopod 1) features and live coloration. The 16S rRNA and the Cytochrome Oxidase I (COI) (DNA barcoding) mitochondrial genes were used as molecular markers. Both morphological and molecular analyses revealed that putative specimens of P. crinita from Brazil and those assigned to P. finneganae were no different from specimens presently assignable to P. lichtensteinii. P. finneganae is regarded as a junior synonym of P. lichtensteinii, and we apply P. crinita only to specimens we examined from the Gulf of Mexico. Specimens from Brazil previously reported as P. crinita are herewith concluded to represent P. lichtensteinii. Additionally, P. townsendi is a junior synonym of P. orbicularis, Iliacantha hancocki is concluded to be a junior synonym of P. subovata, while P. aquilonaris and P. mediterranea are found to represent separate species. On the basis of our revisions, eight species of Persephona are considered valid, and the reported distribution for P. crinita is restricted. PMID:27099956

  19. Gene discovery for the carcinogenic human liver fluke, Opisthorchis viverrini

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    Gasser Robin B

    2007-06-01

    Full Text Available Abstract Background Cholangiocarcinoma (CCA – cancer of the bile ducts – is associated with chronic infection with the liver fluke, Opisthorchis viverrini. Despite being the only eukaryote that is designated as a 'class I carcinogen' by the International Agency for Research on Cancer, little is known about its genome. Results Approximately 5,000 randomly selected cDNAs from the adult stage of O. viverrini were characterized and accounted for 1,932 contigs, representing ~14% of the entire transcriptome, and, presently, the largest sequence dataset for any species of liver fluke. Twenty percent of contigs were assigned GO classifications. Abundantly represented protein families included those involved in physiological functions that are essential to parasitism, such as anaerobic respiration, reproduction, detoxification, surface maintenance and feeding. GO assignments were well conserved in relation to other parasitic flukes, however, some categories were over-represented in O. viverrini, such as structural and motor proteins. An assessment of evolutionary relationships showed that O. viverrini was more similar to other parasitic (Clonorchis sinensis and Schistosoma japonicum than to free-living (Schmidtea mediterranea flatworms, and 105 sequences had close homologues in both parasitic species but not in S. mediterranea. A total of 164 O. viverrini contigs contained ORFs with signal sequences, many of which were platyhelminth-specific. Examples of convergent evolution between host and parasite secreted/membrane proteins were identified as were homologues of vaccine antigens from other helminths. Finally, ORFs representing secreted proteins with known roles in tumorigenesis were identified, and these might play roles in the pathogenesis of O. viverrini-induced CCA. Conclusion This gene discovery effort for O. viverrini should expedite molecular studies of cholangiocarcinogenesis and accelerate research focused on developing new interventions

  20. Variation in biochemical constituents and master elements in common seaweeds from Alexandria Coast, Egypt, with special reference to their antioxidant activity and potential food uses: prospective equations.

    Science.gov (United States)

    Ismail, Mona M; El Zokm, Gehan M; El-Sayed, Abeer A M

    2017-11-25

    Biochemical constituents and master elements (Pb, Cr, Cd, Fe, Cu, Zn, Hg, B, Al, SO 4 2- , Na, K, Li, Ca, Mg, and F) were investigated in six different seaweed species from Abu Qir Bay in the Egyptian Mediterranean Sea coast. The moisture level ranged from 30.26% in Corallina mediterranea to 77.57% in Padina boryana. On dry weight basis, the ash contents varied from 25.53% in Jania rubens to 88.84% in Sargassum wightii. The protein contents fluctuated from 8.26% in S. wightii to 28.01% in J. rubens. Enteromorpha linza showed the highest lipids (4.66%) and carbohydrate contents (78.95%), whereas C. mediterranea had the lowest lipid (0.5%), and carbohydrate contents (38.12%). Chlorophylls and carotenoid contents varied among the species. Total antioxidant capacity of the tested green seaweeds had the highest activities followed by brown and red seaweeds which had a similar trend of phenol and tannins contents. High reducing power was observed in all tested seaweeds extract except Ulva lactuca. Brown species had the highest amount of elements followed by red and green seaweeds. Notably, SO 4 2- recorded the highest level in the tested green species (108.05 mg/g dry weight (DW)). The Ca/Mg and K/Na ratios reflected highly significant difference between seaweed species. This study keeps an eye on 29 parameters and by applying stepwise multiple regression analysis, prospective equations have been set to describe the interactions between these parameters inside seaweeds. Accordingly, the tested seaweeds can be recommended as a source of healthy food with suitable ion quotient and estimated daily intake values.