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Sample records for biotype 1a isolate

  1. Characterization of Yersinia enterocolitica biotype 1A strains isolated from swine slaughterhouses and markets.

    Science.gov (United States)

    Paixão, Renata; Moreno, Luisa Zanolli; Sena de Gobbi, Débora Dirani; Raimundo, Daniele Cristine; Hofer, Ernesto; Matté, Maria Helena; Ferreira, Thais Sebastiana Porfida; de Moura Gomes, Vasco Tulio; Costa, Barbara Leticia Pereira; Moreno, Andrea Micke

    2013-01-01

    Yersinia enterocolitica is an important foodborne pathogen that causes illness in humans and animals. Y. enterocolitica is also the most heterogeneous species of the genus and is divided into distinct serotypes and over six biotypes. Y. enterocolitica biotype 1A strains are classically considered as nonpathogenic; however, some biotype 1A isolates have been considered as causative of gastrointestinal disease, yielding symptoms indistinguishable from those produced by pathogenic biotypes. Even after decades of isolation of clinical strains, the pathogenic mechanisms of these isolates are still not fully understood. In the present study, 122 Yersinia enterocolitica biotype 1A strains isolated from swine slaughterhouses and meat markets in Sao Paulo, Brazil, were characterized according to the presence of the virulence genes ail, virF, and ystA. A total of 94 strains were positive to at least one virulence gene (77.05%), and 67 were positive to all of them (54.92%). Twenty-two strains were submitted to PFGE genotyping resulting in 22 distinct pulsotypes, varying from 50% to 84% of genetic similarity. Any clustering tendency among pulsotypes related to origin, isolation site, or even virulence profile was not observed. The present study reports an important contamination of the environment in swine slaughterhouses, meat markets, and pork, by potentially virulent Y. enterocolitica biotype 1A.

  2. Characterization of Yersinia enterocolitica Biotype 1A Strains Isolated from Swine Slaughterhouses and Markets

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    Renata Paixão

    2013-01-01

    Full Text Available Yersinia enterocolitica is an important foodborne pathogen that causes illness in humans and animals. Y. enterocolitica is also the most heterogeneous species of the genus and is divided into distinct serotypes and over six biotypes. Y. enterocolitica biotype 1A strains are classically considered as nonpathogenic; however, some biotype 1A isolates have been considered as causative of gastrointestinal disease, yielding symptoms indistinguishable from those produced by pathogenic biotypes. Even after decades of isolation of clinical strains, the pathogenic mechanisms of these isolates are still not fully understood. In the present study, 122 Yersinia enterocolitica biotype 1A strains isolated from swine slaughterhouses and meat markets in Sao Paulo, Brazil, were characterized according to the presence of the virulence genes ail, virF, and ystA. A total of 94 strains were positive to at least one virulence gene (77.05%, and 67 were positive to all of them (54.92%. Twenty-two strains were submitted to PFGE genotyping resulting in 22 distinct pulsotypes, varying from 50% to 84% of genetic similarity. Any clustering tendency among pulsotypes related to origin, isolation site, or even virulence profile was not observed. The present study reports an important contamination of the environment in swine slaughterhouses, meat markets, and pork, by potentially virulent Y. enterocolitica biotype 1A.

  3. Characteristics of Yersinia enterocolitica biotype 1A strains isolated from patients and asymptomatic carriers.

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    Stephan, R; Joutsen, S; Hofer, E; Säde, E; Björkroth, J; Ziegler, D; Fredriksson-Ahomaa, M

    2013-07-01

    Yersinia enterocolitica biotype 1A strains are frequently isolated from the environment, foods, and animals, and also from humans with yersiniosis. There are controversial reports on the pathogenicity of biotype 1A strains. In this study, 811 fecal samples from asymptomatic humans from Switzerland were studied for the presence of Y. enterocolitica. Nine (1.1%) of the 811 samples were positive for Y. enterocolitica 1A. These strains were compared with 12 Y. enterocolitica 1A strains from Swiss patients with diarrhea isolated in the same year. Almost all (20/21) Y. enterocolitica 1A strains carried the ystB gene, seven strains carried the hreP gene, and none carried the ail, ystA, myfA, yadA, or virF genes. Most (17/21) Y. enterocolitica 1A strains belonged to two major clusters, A and B, by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF MS). Strains of cluster B were only isolated from humans with diarrhea; however, ystB and hreP genes were detected in strains from both clinical and non-clinical samples and from strains of clusters A and B. Using ribotyping, six restriction patterns among biotype 1A strains were obtained with HindIII enzyme. The most common ribotype (RT I) was found in strains isolated from humans with and without diarrhea. All biotype 1A strains had a unique NotI profile by pulsed-field gel electrophoresis (PFGE), showing a very high genetic diversity. In this study, Y. enterocolitica 1A strains from clinical and non-clinical samples could not be clearly differentiated from each other. More research is needed in order to prove that biotype 1A strains are a primary cause for human yersiniosis and not only a secondary finding.

  4. Adding to Yersinia enterocolitica Gene Pool Diversity: Two Cryptic Plasmids from a Biotype 1A Isolate

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    Daniela Lepka

    2009-01-01

    Full Text Available We report the nucleotide sequence of two novel cryptic plasmids (4357 and 14 662 base pairs carried by a Yersinia enterocolitica biotype 1A strain isolated from pork. As distinguished from most biotype 1A strains, this isolate, designated 07-04449, exhibited adherence to eukaryotic cells. The smaller plasmid pYe4449-1 carries five attributable open reading frames (ORFs encoding the first CcdA/CcdB-like antitoxin/toxin system described for a Yersinia plasmid, a RepA-like replication initiation protein, and mobilizing factors MobA and MobC. The deduced amino acid sequences showed highest similarity to proteins described in Salmonella (CcdA/B, Klebsiella (RepA, and Plesiomonas (MobA/C indicating genomic fluidity among members of the Enterobacteriaceae. One additional ORF with unknown function, termed ORF5, was identified with an ancestry distinct from the rest of the plasmid. While the C+G content of ORF5 is 38.3%, the rest of pYe4449-1 shows a C+G content of 55.7%. The C+G content of the larger plasmid pYe4449-2 (54.9% was similar to that of pYe4449-1 (53.7% and differed from that of the Y. enterocolitica genome (47.3%. Of the 14 ORFs identified on pYe4449-2, only six ORFs showed significant similarity to database entries. For three of these ORFs likely functions could be ascribed: a TnpR-like resolvase and a phage replication protein, localized each on a low C+G island, and DNA primase TraC. Two ORFs of pYe4449-2, ORF3 and ORF7, seem to encode secretable proteins. Epitope-tagging of ORF3 revealed protein expression at 4°C but not at or above 27°C suggesting adaptation to a habitat outside swine. The hypothetical protein encoded by ORF7 is the member of a novel repeat protein family sharing the DxxGN(xnDxxGN motif. Our findings illustrate the exceptional gene pool diversity within the species Y. enterocolitica driven by horizontal gene transfer events.

  5. Genotypic diversity and virulence markers of Yersinia enterocolitica biotype 1A strains isolated from clinical and non-clinical origins.

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    Campioni, Fábio; Falcão, Juliana P

    2014-03-01

    Yersinia enterocolitica biotype 1A (B1A) strains are considered as non-pathogenic; however, some reports have identified some strains as the causal agents of infection. In South America, few studies molecularly characterized the strains of this biotype. This work typed 51 B1A strains isolated from clinical and non-clinical sources from Brazil and Chile by Enterobacterial Repetitive Intergenic Consensus-PCR (ERIC-PCR) to elucidate their genotypic diversity, and verify the distribution of 11 virulence markers by PCR. The strains were divided into two groups, ERIC-A and ERIC-B, clustered independently of their clinical or non-clinical origin. No differences were observed in the frequencies of the virulence markers between clinical and non-clinical strains. However, the genes ystB, hreP and myfA occurred exclusively in the strains of the group ERIC-A. Some clinical and non-clinical strains were clustered in the same genetic group and presented the same number of virulence markers, which might suggest the role of the environment and food as a potential source of infection for humans and animals. The results corroborate with the hypothesis that B1A strains are divided into two main clusters that differ in the frequency of some virulence markers, a fact observed for the first time in South American strains.

  6. Two novel ail-positive biotype 1A strains of Yersinia enterocolitica isolated in China with unequal adhesion and invasion properties.

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    Liang, Junrong; Bi, Zhenqiang; Shi, Guoxiang; Xiao, Yuchun; Qiu, Haiyan; Kou, Zengqiang; Hu, Bin; Jing, Huaiqi; Wang, Xin

    2014-10-01

    Yersinia enterocolitica is an enteric pathogen having six biotypes: 1A, 1B, 2, 3, 4, and 5. Different bioserotypes have been associated with varying pathogenicity, and the strains of biotype 1A lack the virulence-associated pYV-bearing genes and were once considered to be avirulent. However, there is growing epidemiological, clinical, and experimental evidence to suggest some biotype 1A isolates are virulent and can cause gastrointestinal disease. Here, we describe two biotype 1A strains discovered from 3807 isolates that carry the ail (attachment and invasion locus) gene. The two strains showed unique PFGE patterns compared to all other isolates in the Chinese Y. enterocolitica isolate PFGE database. Strain SDWL-003 isolated from a sheep shared ail sequence identical to A1 pattern, and the foxA (ferrioxamine receptor) sequence was identical to the pathogenic F5 pattern, besides, the PFGE patterns of SDWL-003 was also cluster to pathogenic branch; however it does not attach to or invade Hep-2 cells. The ail sequence of strain 2006RAT isolated from a Microtus fortis showed several mutations compared to other published genomes, and therefore formed an entirely new pathogenic pattern. Though it clustered to non-pathogenic block with foxA sequence polymorphism analysis or PFGE assay, the strain 2006RAT showed adhesion properties. The data here bring new insights into the molecular genetics of Y. enterocolitica biotype 1A, show some isolates of 1A biotype gaining potential pathogenicity using the function of the virulence gene - ail, and indicate the lateral gene transfer of ail virulence genes proceeded between pathogenic and nonpathogenic Y. enterocolitica.

  7. Clinical isolates of Yersinia enterocolitica Biotype 1A represent two phylogenetic lineages with differing pathogenicity-related properties

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    Sihvonen Leila M

    2012-09-01

    Full Text Available Abstract Background Y. enterocolitica biotype (BT 1A strains are often isolated from human clinical samples but their contribution to disease has remained a controversial topic. Variation and the population structure among the clinical Y. enterocolitica BT 1A isolates have been poorly characterized. We used multi-locus sequence typing (MLST, 16S rRNA gene sequencing, PCR for ystA and ystB, lipopolysaccharide analysis, phage typing, human serum complement killing assay and analysis of the symptoms of the patients to characterize 298 clinical Y. enterocolitica BT 1A isolates in order to evaluate their relatedness and pathogenic potential. Results A subset of 71 BT 1A strains, selected based on their varying LPS patterns, were subjected to detailed genetic analyses. The MLST on seven house-keeping genes (adk, argA, aroA, glnA, gyrB, thrA, trpE conducted on 43 of the strains discriminated them into 39 MLST-types. By Bayesian analysis of the population structure (BAPS the strains clustered conclusively into two distinct lineages, i.e. Genetic groups 1 and 2. The strains of Genetic group 1 were more closely related (97% similarity to the pathogenic bio/serotype 4/O:3 strains than Genetic group 2 strains (95% similarity. Further comparison of the 16S rRNA genes of the BT 1A strains indicated that altogether 17 of the 71 strains belong to Genetic group 2. On the 16S rRNA analysis, these 17 strains were only 98% similar to the previously identified subspecies of Y. enterocolitica. The strains of Genetic group 2 were uniform in their pathogenecity-related properties: they lacked the ystB gene, belonged to the same LPS subtype or were of rough type, were all resistant to the five tested yersiniophages, were largely resistant to serum complement and did not ferment fucose. The 54 strains in Genetic group 1 showed much more variation in these properties. The most commonly detected LPS types were similar to the LPS types of reference strains with serotypes O

  8. Biotypes of Gardnerella vaginalis isolated from urinary tract.

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    González-Pedraza Avilés, A; Ortíz-Zaragoza, M C; Inzunza-Montiel, A E; Ponce-Rosas, E R

    1996-01-01

    A modified scheme is proposed for biotyping Gardnerella vaginalis isolated from urinary tract of symptomatic and asymptomatic women based on detection of hippurate hydrolysis, beta-galactosidase (ONPG) and lipase, and fermentation of arabinose, galactose and xylose. Thirty biotypes were found among 73 strains. The distribution of biotypes was similar in both populations but the biotypes 1H, 5G and 7G were found more frequently in women without symptoms of urinary tract infection.

  9. Biotyping of thermophilic Campylobacter spp. isolated from poultry in and around Anand city, Gujarat, India

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    R. S. Tayde

    2014-05-01

    Full Text Available Aim: To study the prevalence of different biotypes of thermophilic Campylobacter spp. in the study area. Materials and Methods: A total of 150 samples comprising 90 chicken and 60 caecal content were collected from retail meat market and processed for isolation of Campylobacter spp. 52 Campylobacter isolates obtained from raw poultry meat (6 and caecal content (46 were subjected to biotyping using Lior's biotyping scheme. Results: Among the 52 Campylobacter isolates studied, 60.46 % isolates were identified as Campylobacter jejuni Biotype I and 39.53% were C. jejuni Biotype II, whereas 83.33 % were C. coli Biotype I and 16.66 % C. coli Biotype II. No other biotypes were identified. Conclusions: The present study revealed that C. jejuni Biotype I was more prevalent than Biotype II whereas in case of C. coli, Biotype I was more prevalent than Biotype II providing basis for further epidemiological study.

  10. Biotypes and virulence factors of Gardnerella vaginalis isolated from cases of bacterial vaginosis

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    Udayalaxmi, J.; Bhat, G. K.; S Kotigadde

    2011-01-01

    The present study was conducted to correlate the biotypes of Gardnerella vaginalis strains isolated from cases of bacterial vaginosis and their virulence factors. Thirty-two strains of G. vaginalis isolated from cases of bacterial vaginosis were biotyped. Adherence to vaginal epithelial cells, biofilm production, surface hydrophobicity, phospholipase C and protease activity were tested on these isolates. Biotype 1 was the most prevalent (8; 25%), followed by biotype 2 (7; 21.9%) and biotypes ...

  11. Biotypes and virulence factors of Gardnerella vaginalis isolated from cases of bacterial vaginosis.

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    Udayalaxmi, J; Bhat, G K; Kotigadde, S

    2011-01-01

    The present study was conducted to correlate the biotypes of Gardnerella vaginalis strains isolated from cases of bacterial vaginosis and their virulence factors. Thirty-two strains of G. vaginalis isolated from cases of bacterial vaginosis were biotyped. Adherence to vaginal epithelial cells, biofilm production, surface hydrophobicity, phospholipase C and protease activity were tested on these isolates. Biotype 1 was the most prevalent (8; 25%), followed by biotype 2 (7; 21.9%) and biotypes 5 and 8 (5; 15.6%). We did not find any statistical correlation between G. vaginalis biotypes and its virulence factors. Virulence factors expressed by G. vaginalis were not associated with a single biotype.

  12. Biotypes and virulence factors of Gardnerella vaginalis isolated from cases of bacterial vaginosis

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    J Udayalaxmi

    2011-01-01

    Full Text Available The present study was conducted to correlate the biotypes of Gardnerella vaginalis strains isolated from cases of bacterial vaginosis and their virulence factors. Thirty-two strains of G. vaginalis isolated from cases of bacterial vaginosis were biotyped. Adherence to vaginal epithelial cells, biofilm production, surface hydrophobicity, phospholipase C and protease activity were tested on these isolates. Biotype 1 was the most prevalent (8; 25%, followed by biotype 2 (7; 21.9% and biotypes 5 and 8 (5; 15.6%. We did not find any statistical correlation between G. vaginalis biotypes and its virulence factors. Virulence factors expressed by G. vaginalis were not associated with a single biotype.

  13. Yersinia enterocolitica in sheep - a high frequency of biotype 1A

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    Söderqvist Karin

    2012-06-01

    Full Text Available Abstract Background Pigs are regarded as the main reservoir for human pathogenic Yersinia enterocolitica, which is dominated by bioserotype 4/O:3. Other animals, including sheep, have occasionally been reported as carriers of pathogenic strains of Y. enterocolitica. To our knowledge, this is the first study performed in the Nordic countries in which the presence of Y. enterocolitica in sheep is investigated. Methods Tonsils and faecal samples collected from sheep slaughtered on the island Gotland (Sweden from September 2010 through January 2011 were analysed for presence of Y. enterocolitica. In an attempt to maximize recovery, several cultural strategies were applied. Various non-selective media were used and different temperatures and durations of the enrichment were applied before subculturing on Cefsulodin Irgasan Novobiocin (CIN agar. Presumptive Y. enterocolitica colonies were subjected to urease, API 20E and agglutination test. Yersinia enterocolitica isolates were biotyped, serotyped, and tested for pathogenicity using a TaqMan PCR directed towards the ail-gene that is associated with human pathogenic strains of Y. enterocolitica. Results The samples collected from 99 sheep yielded 567 presumptive Y. enterocolitica colonies. Eighty urease positive isolates, from 35 sheep, were identified as Y. enterocolitica by API 20E. Thirty-four of 35 further subtyped Y. enterocolitica isolates, all from faecal samples, belonged to biotype 1A serotype O:5, O:6. O:13,7 and O:10. One strain was Yersinia mollaretii serotype O:62. No human pathogenic strains of Y. enterocolitica were found in the investigated sheep. Other species identified were Y. kristensenii (n = 4, Y. frederiksenii/intermedia (n = 3, Providencia rettgeri (n = 2, Serratia marcescens (n = 1 and Raoultella ornithinolytica (n = 1. Conclusions This study does not support the hypothesis that sheep play an important role in transmission of the known human pathogenic Y

  14. Yersinia ruckeri biotype 2 isolates from mainland Europe and the UK likely represent different clonal groups

    DEFF Research Database (Denmark)

    Wheeler, Richard W.; Davies, Robert L.; Dalsgaard, Inger

    2009-01-01

    different pulsotypes, suggesting that they represented different clones that may have emerged separately. Danish biotype 2 isolates recovered since 1995 were indistinguishable by PFGE from the dominant biotype 1 clone responsible for the majority of outbreaks in Denmark and the rest of mainland Europe...

  15. Differentiation of Yersinia enterocolitica biotype 1A from pathogenic Yersinia enterocolitica biotypes by detection of β-glucosidase activity: comparison of two chromogenic culture media and Vitek2.

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    Karhukorpi, Jari; Päivänurmi, Marjut

    2014-01-01

    Aesculin hydrolysis (ESC) is one of the key reactions in differentiating pathogenic Yersinia enterocolitica biotypes 1B, 2, 3, 4 and 5 from the less-pathogenic biotype 1A. Because the ESC reaction is caused by β-glucosidase (βGLU) activity of the bacteria, we studied whether two commonly used methods (BBL CHROMagar Orientation and Vitek2 Gram-negative identification card) could be used in assessing βGLU activity of 74 Yersinia strains. Both methods were sensitive (100 % and 97 %) and specific (100 % and 100 %) in differentiating βGLU-positive YE BT1A from βGLU-negative Y. enterocolitica biotypes. For a subset of strains (n = 69), a new selective CHROMagar Yersinia showed excellent agreement with the strains' βGLU activity. Thus all the methods evaluated in this study may be used to differentiate between YE BT1A and other Y. enterocolitica biotypes.

  16. The ail gene is present in some Yersinia enterocolitica biotype 1A strains.

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    Sihvonen, Leila M; Hallanvuo, Saija; Haukka, Kaisa; Skurnik, Mikael; Siitonen, Anja

    2011-03-01

    One chromosomal virulence marker of Yersinia is the gene ail, which encodes Ail, an outer membrane protein that promotes attachment and invasion. A high correlation has been found between the ail gene and the virulence of Yersinia. Here, we report two Yersinia enterocolitica biotype 1A strains that are usually nonpathogenic and carry the ail gene. The ail gene sequences of biotype 1A strains displayed similarity to the bioserotype 1B/O:8 strain 8081. The finding suggests that ail-based detection methods for Y. enterocolitica alone are insufficient to detect real pathogenic strains.

  17. Importance of isolation and biotypization of Gardnerella vaginalis in diagnosis of bacterial vaginosis.

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    Numanović, Fatima; Hukić, Mirsada; Nurkić, Mahmud; Gegić, Merima; Delibegović, Zineta; Imamović, Alma; Pasić, Selma

    2008-08-01

    The natural habitat of Gardnerella vaginalis is a vagina since it could be located among 69% of women who have no signs of vaginal infection and in the vagina of as many as 13.5% girls. G. vaginalis is almost certainly identified among women diagnosed with bacterial vaginosis as well as in the urethra of their sexual partner. The increase in prevalence and concentration of G. vaginalis among patients diagnosed with this syndrome confirms that G. vaginalis plays a significant role in its pathogenesis. In our research, based on Amsel criteria for three or more clinical signs of bacterial vaginosis, it was diagnosed in 20.5% of women with subjective problems of vaginal infection, and in 48.80% of women with subjective symptoms characteristic of this disease. G. vaginalis was isolated from vaginal secretion of women without clinical signs characteristic of bacterial vaginosis. In 2.58% of cases it was solitary, while in 1.28% it was found in combination with other aerobic and anaerobic bacteria and, in 1.28% women combined with Candida albicans. The isolation of G. vaginalis was significantly increased (pbiotype of G. vaginalis, different from a source biotype or as a consequence of wrong treatment. Following Piot biotype scheme, biotypes 2., 3. and 7. G. vaginalis are significantly more often isolated from women who suffer from bacterial vaginosis. Biotype 7. G. vaginalis, isolated from the group of women without clinical signs of bacterial vaginosis, accounted for 2.58% cases. Following Benit biotype scheme, biotypes IVa, IVc and IIc were identified in 12.90% cases, while biotypes IIIa, IIa, Ia, IVb, IIb were found in 6.45% cases. Lipase-positive isolates of G. vaginalis were significantly more frequently accompanied by the syndrome of bacterial vaginosis.

  18. Biotypes of Gardnerella vaginalis isolated from non-specific vaginitis patients in Bombay.

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    Pandit, D V; Barve, S M; Deodhar, L P

    1989-11-01

    The incidence and prevalent biotypes of G. vaginalis in patients with non-specific vaginitis from Bombay, was studied. Of 300 patients screened, 105 were diagnosed to have nonspecific vaginitis (NSV). G. vaginalis was isolated from 71 per cent patients with NSV; 34.6 and 29.3 per cent G. vaginalis were belonging to biotypes 5 and 1 respectively. In 55 per cent patient, G. vaginalis was associated with anaerobes. None of the isolated strains of G. vaginalis was sensitive to 5 micrograms metronidazole disc whereas 93 per cent of the strains were sensitive to 50 micrograms metronidazole disc.

  19. Genotyping of Yersinia enterocolitica biotype 1A strains from clinical and nonclinical origins by pulsed-field gel electrophoresis.

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    Campioni, Fábio; Falcão, Juliana P

    2014-06-01

    Yersinia enterocolitica biotype 1A (B1A) strains are considered mainly nonpathogenic. However, some studies considered strains of this biotype to be the causal agents of infections in humans and animals. In South America, there are no studies that have compared clinical and nonclinical strains of B1A typed by pulsed-field gel electrophoresis (PFGE) and none that have compared the capability of different enzymes on typing these strains. This study typed 51 Y. enterocolitica B1A strains isolated in Brazil and Chile by PFGE, testing the enzymes XbaI, NotI, and XhoI. The resulting dendrograms discriminated the strains in 47, 40, and 49 pulsotypes generated by the cleavage with the enzymes XbaI, NotI, and XhoI, respectively. The majority of the strains were grouped independently of their clinical or nonclinical origins. The high discriminatory power of PFGE confirmed the heterogeneity of B1A strains but could not divide the strains studied into clusters that differed in the frequency of some virulence genes as observed in studies using other methodologies.

  20. Biotyping and genotyping (MLVA16 of Brucella abortus isolated from cattle in Brazil, 1977 to 2008.

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    Sílvia Minharro

    Full Text Available Brucellosis is a worldwide distributed zoonosis that causes important economic losses to animal production. In Brazil, information on the distribution of biovars and genotypes of Brucella spp. is scarce or unavailable. This study aimed (i to biotype and genotype 137 Brazilian cattle isolates (from 1977 to 2008 of B. abortus and (ii to analyze their distribution. B. abortus biovars 1, 2 and 3 (subgroup 3b were confirmed and biovars 4 and 6 were first described in Brazil. Genotyping by the panel 1 revealed two groups, one clustering around genotype 40 and another around genotype 28. Panels 2A and 2B disclosed a high diversity among Brazilian B. abortus strains. Eighty-nine genotypes were found by MLVA16. MLVA16 panel 1 and 2 showed geographic clustering of some genotypes. Biotyping and MLVA16 genotyping of Brazilian B. abortus isolates were useful to better understand the epidemiology of bovine brucellosis in the region.

  1. Isolation and biotyping of Brucella melitensis from aborted sheep and goat fetuses

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    BÜYÜKCANGAZ, Esra; ŞEN, Ayşin; KAHYA, Serpil

    2014-01-01

    The possible role of Brucella spp. in 65 abortion cases, 55 from sheep and 10 from goats, occurring in the birth seasons of 2004 and 2005 in northwestern Turkey was investigated. Colony morphology, agglutination by acriflavin, H2S production, CO2 requirement, dye sensitivity in thionin, basic fuchsin, growth characteristics in streptomycin, lysis with Tbilisi phage, and agglutination with monospecific A- and M antisera were examined for identification and biotyping. The isolates from 21 of 55...

  2. THE STUDY OF ENTEROTOXIGENICITY OF THE BIOTYPE 1A YERSINIA ENTEROCOLITICA

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    E. A. Bogumilchik

    2011-01-01

    Full Text Available Abstract. The representatives of Y. enterocolitica biotype 1А which are considered as nonpathogenic microorganisms were tested for production of the thermostable enterotoxin YST B (Yersinia Stable Toxin. This toxin is characterized by strong toxic action and it can bring on diarrhea in human and animals. The chromosome gene of thermostable enterotoxin ystB was detected by PCR in 87.1% out of 116 studied strains of different origin and territorial isolation. To determine toxin production in vitro the studied strains cultivated in various conditions: in 26°C and 37°С in usual culture medium and in 37°С in the medium corresponded to the content of intestine. In part of the studied strains the toxin production was revealed on the model of newborn mice in both temperature regimes of cultivation 26°С and 37°С. The study of toxin production in representatives of Y. enterocolitica biotype 1А showed their possible role as etiological agents of diarrhea.

  3. Biotypes and ScM types of isolates of Streptococcus canis from diseased and healthy cats.

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    Timoney, J F; Velineni, S; Ulrich, B; Blanchard, P

    2017-04-08

    Lancefield group G Streptococcus canis is a component of the normal urogenital and pharyngeal flora of the cat. It is also frequently implicated in epizootics of severe disease in closed cat colonies and animal shelters. Given the importance of S canis as a feline pathogen and relative lack of published information on characteristics potentially associated with virulence, the authors have compared isolates from healthy and diseased cats in New York and California using fermentation profiles (biotype) and ScM sequences. With few exceptions, isolates associated with disease were biotype 1. Four alleles of scm were identified of which type 1 dominated in diseased cats. Type 4 allelic variants were found only in healthy cats and all but one were biotype 2. Type 2 and 3 alleles showed extensive N-terminal variation suggesting a plasminogen-binding site as found on the type 1 allele was absent. Cat antisera to ScM were opsonobactericidal, and these potentially protective antibodies increased during convalescence.

  4. [Biotypes and antibiotic resistance patterns of Gardnerella vaginalis strains isolated from healthy women and women with bacterial vaginosis].

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    Tosun, Ilknur; Alpay Karaoğlu, Sengül; Ciftçi, Hasan; Buruk, Celal Kurtuluş; Aydin, Faruk; Kiliç, Ali Osman; Ertürk, Murat

    2007-01-01

    As Gardnerella vaginalis is accepted as a member of normal vaginal flora, it is one of the dominant species which has been related to bacterial vaginosis (BV). The aim of this study was to determine the isolation rate, biotypes and antibiotic resistance patterns of G.vaginalis from the vaginal swab samples of 408 women who were admitted to the outpatient clinics of Family Planning Center. Hippurate hydrolysis, lipase and beta-galactosidase tests were performed for biotyping the isolates, and agar dilution (for metronidazole) and disk diffusion (for clindamycin) tests were used for the detection of antibiotic resistance patterns. As a result, by Nugent's BV scoring protocol, 122 (29.9%), 20 (29.4%), 137 (33.6%), and 18 (4.4%) of the women were diagnosed as BV, intermediate form, normal vaginal flora (NVF) and mycotic vaginosis, respectively. The overall isolation rate of G.vaginalis was found as 23% (94/408). Of them, 56.4% (53/94) and 8.5% (8/94) were isolated from samples of BV cases and subjects with NVF, respectively, and the difference was statistically significant (pbiotyping results showed that the most frequently detected types were biotype 1 (44%), 5 (20%) and 4 (18%). There was no statistically significant difference between the biotype distribution of BV patients and the subjects who have NVF (p=0.687). The results of antibiotic susceptibility tests indicated that 70% and 53% of the isolates were resistant to metronidazole and clindamycin, respectively. It was of interest that MIC values for metronidazole was > or =128 microg/ml in 57% of resistant strains. The data of this study has emphasized that the metronidazole resistance is very high in our population, and the large scale studies are needed to clarify the relationship between BV and G.vaginalis biotypes, which can be found in the normal vaginal flora.

  5. Biotypes of Gardnerella vaginalis.

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    Piot, P; Van Dyck, E; Peeters, M; Hale, J; Totten, P A; Holmes, K K

    1984-10-01

    A simple and reproducible scheme for identifying biotypes of Gardnerella vaginalis has been developed, based on reactions for lipase, hippurate hydrolysis, and beta-galactosidase. Among a total of 359 strains tested, eight biotypes were observed, the most common ones being types 1 (beta-galactosidase positive, lipase positive, hippurate positive), 2 (beta-galactosidase negative, lipase positive, hippurate positive), and 5 (beta-galactosidase negative, lipase negative, hippurate positive). The distribution in biotypes was similar among isolates from Antwerp, Seattle, and Nairobi. There were no differences in biotypes between strains isolated from patients with and without bacterial vaginosis (nonspecific vaginitis). Up to 14% of women with bacterial vaginosis harbored at least two different biotypes of G. vaginalis in the vagina. G. vaginalis strains isolated before and after treatment for bacterial vaginosis belonged to identical biotypes when the time interval between two specimens was less than 1 week. Similarly, G. vaginalis isolates from the vaginas of women with bacterial vaginosis and from the urethras of their male sex partners belonged to identical biotypes when strains were isolated within the same 24-h period from both partners (P less than 0.005).

  6. Characterisation of geographically and temporally diverse Yersinia ruckeri isolates: evidence that UK and mainland European biotype 2 isolates represent different clonal groups

    Science.gov (United States)

    There have been increased reports of outbreaks of Enteric Redmouth Disease (ERM) caused by Yersinia ruckeri in previously-vaccinated salmonids in Europe, with some of these outbreaks attributed to emergent non-motile, Tween 80 negative, biotype 2 isolates. To gain information about their likely orig...

  7. Virulence-associated gene pattern of porcine and human Yersinia enterocolitica biotype 4 isolates.

    Science.gov (United States)

    Schneeberger, M; Brodard, I; Overesch, G

    2015-04-02

    Yersinia enterocolitica 4/O:3 is the most important human pathogenic bioserotype in Europe and the predominant pathogenic bioserotype in slaughter pigs. Although many studies on the virulence of Y. enterocolitica strains have showed a broad spectrum of detectable factors in pigs and humans, an analysis based on a strict comparative approach and serving to verify the virulence capability of porcine Y. enterocolitica as a source for human yersiniosis is lacking. Therefore, in the present study, strains of biotype (BT) 4 isolated from Swiss slaughter pig tonsils and feces and isolates from human clinical cases were compared in terms of their spectrum of virulence-associated genes (yadA, virF, ail, inv, rovA, ymoA, ystA, ystB and myfA). An analysis of the associated antimicrobial susceptibility pattern completed the characterization. All analyzed BT 4 strains showed a nearly similar pattern, comprising the known fundamental virulence-associated genes yadA, virF, ail, inv, rovA, ymoA, ystA and myfA. Only ystB was not detectable among all analyzed isolates. Importantly, neither the source of the isolates (porcine tonsils and feces, humans) nor the serotype (ST) had any influence on the gene pattern. From these findings, it can be concluded that the presence of the full complement of virulence genes necessary for human infection is common among porcine BT 4 strains. Swiss porcine BT 4 strains not only showed antimicrobial susceptibility to chloramphenicol, cefotaxime, ceftazidime, ciprofloxacin, colistin, florfenicol, gentamicin, kanamycin, nalidixic acid, sulfamethoxazole, streptomycin, tetracycline and trimethoprim but also showed 100% antibiotic resistance to ampicillin. The human BT 4 strains revealed comparable results. However, in addition to 100% antibiotic resistance to ampicillin, 2 strains were resistant to chloramphenicol and nalidixic acid. Additionally, 1 of these strains was resistant to sulfamethoxazole. The results demonstrated that Y. enterocolitica BT 4

  8. Comparative Genomic Analysis of Clinical and Environmental Vibrio Vulnificus Isolates Revealed Biotype 3 Evolutionary Relationships

    Directory of Open Access Journals (Sweden)

    Yael eKotton

    2015-01-01

    Full Text Available In 1996 a common-source outbreak of severe soft tissue and bloodstream infections erupted among Israeli fish farmers and fish consumers due to changes in fish marketing policies. The causative pathogen was a new strain of Vibrio vulnificus, named biotype 3, which displayed a unique biochemical and genotypic profile. Initial observations suggested that the pathogen erupted as a result of genetic recombination between two distinct populations. We applied a whole genome shotgun sequencing approach using several V. vulnificus strains from Israel in order to study the pan genome of V. vulnificus and determine the phylogenetic relationship of biotype 3 with existing populations. The core genome of V. vulnificus based on 16 draft and complete genomes consisted of 3068 genes, representing between 59% and 78% of the whole genome of 16 strains. The accessory genome varied in size from 781 kbp to 2044 kbp. Phylogenetic analysis based on whole, core, and accessory genomes displayed similar clustering patterns with two main clusters, clinical (C and environmental (E, all biotype 3 strains formed a distinct group within the E cluster. Annotation of accessory genomic regions found in biotype 3 strains and absent from the core genome yielded 1732 genes, of which the vast majority encoded hypothetical proteins, phage-related proteins, and mobile element proteins. A total of 1916 proteins (including 713 hypothetical proteins were present in all human pathogenic strains (both biotype 3 and non-biotype 3 and absent from the environmental strains. Clustering analysis of the non-hypothetical proteins revealed 148 protein clusters shared by all human pathogenic strains; these included transcriptional regulators, arylsulfatases, methyl-accepting chemotaxis proteins, acetyltransferases, GGDEF family proteins, transposases, type IV secretory system (T4SS proteins, and integrases. Our study showed that V. vulnificus biotype 3 evolved from environmental populations and

  9. Bacteriocins in S. mutans strains isolated from children with and without dental caries: biotypes and sensitivity to antibiotics.

    Science.gov (United States)

    Gamboa, Fredy; Chaves, Margarita; Estupiñan, Mabel; Galindo, Adriana

    2008-01-01

    The aim of this study was to determine the production of bacteriocins in the Streptococcus mutans strains isolated from children with and without dental caries. With this purpose the dmft index was determined and non-stimulated saliva was collected from 53 3- to 5-year-old children. The samples were cultured on Mitis Salivarius Bacitracin agar and incubated anaerobically for two days at 37 degrees C. The isolates were biotyped using the Api-ZYM enzymatic system (bioMérieux; Marcy-lE'toile, France). Bacteriocin was detected using the double layer onto brain heart infusion agar technique and the minimal inhibitory concentrations of the isolates were evaluated against penicillin, amoxycillin, cefazolin, erythromycin, clindamycin, imipenem and vancomycin using an agar dilution method. The dental caries experience in these children was 66% (35/53) and dmft index average was 3.2 (range 2-6). S. mutans was found in the saliva of 33 children (62%). In the 33 strains of S. mutans, 10 biotypes were found. Eight (24%) of the 33 strains evaluated produced bacteriocins, 6 of these strains came from patients with dental caries and the other two from patients without dental caries. All isolates were highly sensitive to the antibiotics tested.

  10. An investigation into the influences of species and biotype on the type of IgA1 protease produced by isolates of Haemophilus.

    Science.gov (United States)

    Senior, B W; Ip, C L

    1999-04-01

    A total of 59 isolates of different Haemophilus spp., mostly from clinical specimens, was characterised, biotyped and examined for production of type 1 or type 2 IgA1 protease. IgA1 protease activity was not found in any isolate of a species with no or low virulence for man including H. parainfluenzae, H. haemolyticus, H. aphrophilus, H. paraphrophilus, H. segnis, H. paraphrohaemolyticus and H. haemoglobinophilus. IgA1 protease was produced by all isolates of H. influenzae and H. aegyptius and by some isolates of H. parahaemolyticus. The type of IgA1 protease appeared to be independent of the biotype of the isolate in H. influenzae. For the first time some isolates of H. aegyptius were found that produced type 2 IgA1 protease. IgA1 protease production in H. parahaemolyticus may be associated with the virulence of the isolate.

  11. Pasteurella haemolytica bacteriophage: identification, partial characterization, and relationship of temperate bacteriophages from isolates of Pasteurella haemolytica (biotype A, serotype 1)

    Energy Technology Data Exchange (ETDEWEB)

    Richards, A.B.; Renshaw, H.W.; Sneed, L.W.

    1985-05-01

    Pasteurella haemolytica (biotype A, serotype 1) isolates (n = 15) from the upper respiratory tract of clinically normal cattle, as well as from lung lesions from cases of fatal bovine pasteurellosis, were examined for the presence of bacteriophage after irradiation with UV light. Treatment of all P haemolytica isolates with UV irradiation resulted in lysis of bacteria due to the induction of vegetative development of bacteriophages. The extent of growth inhibition and bacterial lysis in irradiated cultures was UV dose-dependent. Bacterial cultures exposed to UV light for 20 s reached peak culture density between 60 and 70 minutes after irradiation; thereafter, culture density declined rapidly, so that by 120 minutes, it was approximately 60% of the original value. When examined ultrastructurally, lytic cultures from each isolate revealed bacteriophages with an overall length of approximately 200 nm and that appeared to have a head with icosahedral symmetry and a contractile tail. Cell-free filtrate from each noninduced bacterial isolate was inoculated onto the other bacterial isolates in a cross-culture sensitivity assay for the presence of phages lytic for the host bacterial isolates. Zones of lysis (plaques) did not develop when bacterial lawns grown from the different isolates were inoculated with filtrates from the heterologous isolates.

  12. Phenotypic and genetic characteristics of Vibrio cholerae O1 carrying Haitian ctxB and attributes of classical and El Tor biotypes isolated from Silvassa, India.

    Science.gov (United States)

    Das, Moon Moon; Bhotra, Tilothama; Zala, Dolatsinh; Singh, Durg Vijai

    2016-08-01

    Vibrio cholerae O1 biotype El Tor, the causative agent of the seventh pandemic, has recently been replaced by strains carrying classical and Haitian ctxB in India, Haiti and other parts of the world. We conducted phenotypic and genetic tests to characterize V. cholerae O1 isolated between 2012 and 2014 from Silvassa, India, to examine the presence of virulence and regulatory genes, seventh pandemic marker, ctxB type and biofilm formation and to study genomic diversity. Of the 59 V. cholerae O1, eight isolates belong to El Tor prototype, one to classical prototype and the remaining isolates have attributes of both classical and El Tor biotypes. PCR and ctxB gene sequencing revealed the presence of classical ctxB in four strains and Haitian ctxB in 55 isolates; indicating that isolates were either an El Tor or hybrid variant. All isolates carried virulence, regulatory, adherence, Vibrio seventh pandemic pathogenicity island I and seventh pandemic group-specific marker VC2346, in addition to tcpAET and rstRET, the features of seventh pandemic strains, and produced cholera toxin and biofilm. PFGE analysis showed that the majority of isolates are clonal and belong to fingerprint pattern A; however, pattern B is unrelated and patterns C and D are distinct, suggesting considerable diversity in the genomic content among them. These data thus show that isolates from Silvassa are genetically diverse and that Haitian ctxB and hybrid phenotypes are undergoing global dissemination.

  13. [Gardnerella vaginalis biotypes: modification of a proposed system].

    Science.gov (United States)

    Pedraza-Avilés, A G; Inzunza-Montiel, A E; Ortíz-Zaragoza, M C; Morales-Espinosa, M R; Ponce-Rosas, E R

    1995-01-01

    A modified scheme is proposed for biotyping Gardnerella vaginalis based on detection of hippurate hydrolysis, beta-galactosidase (ONPG) and lipase, and fermentation of arabinose, galactose and xylose. Thirty three biotypes were found among 140 strains from women with and without bacterial vaginosis (non-specific vaginitis). The distribution of biotypes were found to be significantly different, being more predominant the biotypes 1A; 5G; 7A; 7D and 7G in women with vaginosis and the biotypes 5G and 6H in women without vaginosis. These data suggest that some biotypes of Gardnerella vaginalis are associated with bacterial vaginosis.

  14. Caracterização de biótipos de Staphylococcus aureus isolados de mastite bovina Biotyping of Staphylococcus aureus strains isolated from bovine mastitis

    Directory of Open Access Journals (Sweden)

    M.A.V.P. Brito

    2000-10-01

    Full Text Available Duzentos e dezoito amostras de Staphylococcus aureus, isoladas de infecção intramamária de vacas de 44 rebanhos leiteiros, foram classificadas em biótipos de acordo com os testes de produção de estafiloquinase (K, beta-hemolisina (beta , coagulação do plasma bovino (Pl e crescimento na presença de cristal violeta (CV. As amostras foram distribuídas em 10 biótipos e 63 delas foram classificadas nas ecovariedades bovina (35, ovina (17, aviária (10 e humana (1 e 155 não apresentaram características específicas de hospedeiro. Estas últimas podem ser isoladas de homem, cabra, coelho, suíno, alimentos e de mastite bovina. O biótipo 1, encontrado com maior freqüência (37,2%, apresentou o padrão K (-, beta (+, Pl (- e CV (azul. Em sete rebanhos nos quais se examinaram 10 ou mais amostras, verificou-se que, apesar da ocorrência simultânea de mais de um biótipo por rebanho, houve predominância de um sobre os demais.Two hundred and eighteen strains of Staphylococcus aureus isolated from bovine intramammary infections, obtained from 44 different dairy herds, were classified in biotypes based on staphylokinase (K and beta-haemolysin (beta production, bovine plasma coagulation (Pl and growth on crystal violet agar (CV. The strains were assigned to 10 different types, with 63 in the bovine (35, ovine (17, poultry (10 and human (1 ecovars and 155 in non-host specific biotypes. The latter can be isolated from man, goat, rabbit, pig, food, and bovine mastitis. The biotype 1, with reaction pattern K (-, beta (+, Pl (- and CV (blue, was the most frequently found (37,2%. From seven herds ten or more strains were examined. It was found that in spite of the presence of different biotypes per herd, there was always one prevalent biotype.

  15. Identificación y tipificación de biotipos y serotipos de Yersinia enterocolitica Identification and typing of Yersinia enterocolitica biotypes and serotypes isolated

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    Paulino Elizalde Castañeda

    2001-08-01

    Full Text Available OBJETIVO: Conocer la existencia de Yersinia enterocolitica en suínos visiblemente sanos y sacrificados para el consumo humano. MÉTODOS: Fueron estudiadas 100 muestras de tejido linfático obtenidas en el momento del sacrifício, en un matadero del Estado de México. Fueron realizados muestreos pilotos de 20 casos, de los cuales 20% fueron positivos, permitiendo obtener una muestra estudiada (n=100. Las muestras colectadas de tejido linfático fueron acondicionadas para el aislamiento de Yersinia enterocolitica en caldo de Rappaport y en medio de cultivo de Salmonella-Shigella y MacConkey. Las identificaciones fueron efectuadas por medio de pruebas bioquímicas y serológicas, utilizándose en el caso los antisueros O:3, O:8 y O:9 para la biotipificación correspondiente. RESULTADOS: Fueron obtenidos 22 aislamientos tipificándose 8 serotipos pertenecientes al O:3 y 8 al O:9 correspondientes al biotipo 1; y, en 6 muestras no fue posible la serotipificación. No se encontró en el total de los aislados el serotipo O:8. CONCLUSIONES: En base en la metodología, se registró la presencia de Y. enterocolitica y sus serogrupos en tejido linfático de porcinos por la primera vez en México; esto es importante porque el patógeno y sus serotipos aislados están comprometidos con mayor frecuencia con problemas de salud pública.OBJECTIVE: To assess the presence of Yersinia enterocolitica in otherwise healthy pigs slaughtered for human consumption. METHODS: One hundred pharyngeal tonsils were sampled in a slaughterhouse in the state of Mexico. The minimum sample size (n=100 was calculated based on a preliminary sample of 20 cases, which had 20% positive cases. The collected tonsil samples were inoculated in Rappaport broth, and Salmonella-Shigella and McConkey media. The biotyping identification process was based on biochemical and serological tests using O:3, O:8 and O:9 antisera. RESULTS: Twenty-two isolates were obtained. Most were biotype 1 (8 cases

  16. Biotyping of Bacillus cereus from the street vended Foods in Srinagar area of Kashmir

    Directory of Open Access Journals (Sweden)

    Yasir Hafeez

    Full Text Available Aim: The present study was undertaken to describe the biotyping of Bacillus cereus isolated from different street vended mutton tikka and chutney samples. Materials and Methods: A total of 100 street vended food samples comprising of 60 mutton tikka and 40 chutney samples were tested. Results: The biotype 3 and biotype 4 showed the highest occurrence with, 29.63% and 25.93% isolates falling in these biotypes, respectively. The percentage occurrence of the biotypes 1, 6, 2, 5, and 7 was 14.81%, 11.11%, 7.40%, 7.40% and 3.84%, respectively. The most common found biotypes in Mutton tikka were biotypes 3(29.63%, 4(25.93%, 1(14.81% and 6(11.11%. The Bacillus cereus strains isolated from chutney samples could be divided into 7 of the 9 possible biotypes. The biotypes 6 and 7 showed the highest occurrence with 38.46% and 30.76% falling in these biotypes, respectively. The biotype 5 and 2 were prevalent to the extent of 23.07%, 7.69%, respectively. The biotypes 3, 4 and 1 were absent. The mean bacterial count of 60 mutton tikka and 40 chutney samples was 4.6817 and 5.6575 log cfu/g. 10 Conclusion: The field isolates and the standard strains of Bacillus cereus had similar cultural, morphological and biochemical characteristics. The biotypes recovered from the Mutton tikka samples were biotypes 3, 4, 1 and 6 and in chutneys the biotypes recovered were 6, 7, 5 and 2. The strains of Bacillus cereus were highly resistant to penicillin G (92.59%. [Vet World 2012; 5(10.000: 590-593

  17. Biotypes of Gardnerella vaginalis.

    OpenAIRE

    Piot, P; Van Dyck, E; Peeters, M; Hale, J.; Totten, P A; Holmes, K K

    1984-01-01

    A simple and reproducible scheme for identifying biotypes of Gardnerella vaginalis has been developed, based on reactions for lipase, hippurate hydrolysis, and beta-galactosidase. Among a total of 359 strains tested, eight biotypes were observed, the most common ones being types 1 (beta-galactosidase positive, lipase positive, hippurate positive), 2 (beta-galactosidase negative, lipase positive, hippurate positive), and 5 (beta-galactosidase negative, lipase negative, hippurate positive). The...

  18. Pneumonia due to Haemophilus influenzae (H. aegyptius) biotype 3.

    Science.gov (United States)

    Marraro, R V; McCleskey, F K; Mitchell, J L

    1977-08-01

    Haemophilus influenzae (H. aegyptius) biotype 3 was isolated from eye, nasopharyngeal, and sputum cultures of a 23-month-old male and from sputum and transtracheal aspirate cultures of his 39-year-old mother, both with diffuse bronchopneumonia.

  19. Longitudinal study of the biotypes of Gardnerella vaginalis.

    Science.gov (United States)

    Briselden, A M; Hillier, S L

    1990-12-01

    Gardnerella vaginalis is the predominant vaginal microorganism in women with bacterial vaginosis. However, this organism is also frequently isolated from women without signs or symptoms of vaginitis. Earlier studies have not revealed whether certain biotypes of G. vaginalis are more often associated with bacterial vaginosis or are more common in women who acquire bacterial vaginosis. We used a typing scheme based on tests for beta-galactosidase, hippurate hydrolysis, and lipase, using oleate as a substrate. Of 261 strains tested, the distribution of biotypes observed was as follows: 1, 13%; 2, 9%; 3, 5%; 4, 7%; 5, 41%; 6, 15%; and 8, 10%. Biotype 7 was not observed. The distributions of biotypes from women with and without bacterial vaginosis were found to be significantly different, with the lipase-positive biotypes (biotypes 1, 2, 3, and 4) being more predominant in women with vaginosis (41 versus 23%, P = 0.003). Of 40 women with normal vaginal flora at the index visit who remained normal at follow-up, 23 (57%) acquired a new biotype of G. vaginalis. By comparison, 90% of the 30 women who developed bacterial vaginosis acquired a new biotype of G. vaginalis (P = 0.003). Women with bacterial vaginosis at the index visit who were not treated were no more likely than normal women to have a shift in G. vaginalis biotype. However, 86% of the 30 women with bacterial vaginosis who were treated with an antibiotic at the index visit acquired a different biotype (P = 0.04 compared with the value for untreated women) regardless of treatment success. A trend toward the acquisition of a new biotype was observed among women who had contact with a new sexual partner (81 versus 65%, P = 0.15). These data demonstrate that the lipase-positive isolates of G. vaginalis are associated with bacterial vaginosis. Women who acquire bacterial vaginosis are more likely to have a shift in biotype than women who had normal flora at he follow-up, suggesting that the G. vaginalis isolates

  20. Biotypic diversity in greenbug (Hemiptera: Aphididae): microsatellite-based regional divergence and host-adapted differentiation.

    Science.gov (United States)

    Weng, Yiqun; Perumal, Azhaguvel; Burd, John D; Rudd, Jackie C

    2010-08-01

    Nineteen isolates of the cereal aphid pest greenbug, Schizaphis graminum (Rondani) (Hemiptera: Aphididae), were collected from wheat, Triticum aestivum L.; barley, Hordeum vulgare L.; or noncultivated grass hosts in five locations from Colorado and Wyoming. Parthenogenetic colonies were established. Biotypic profiles of the 19 isolates were determined based on their abilities to damage a set of host plant differentials, and 13 new biotypes were identified. Genetic diversity among the 19 isolates and five previously designated greenbug biotypes (E, G, H, I, and K) was examined with 31 cross-species transferable microsatellite (simple sequence repeat) markers. Neighbor-joining clustering analysis of marker data revealed host-adapted genetic divergence as well as regional differentiation of greenbug populations. Host associated biotypic variation seems to be more obvious in "agricultural biotypes," whereas isolates collected from noncultivated grasses tend to show more geographic divergence. It seems that the biotype sharing the most similar biotypic profiles and the same geographic region with current prevailing one may have the greatest potential to become the new prevailing biotype. Close monitoring of greenbug population dynamics especially biotypic variation on both crop plants and noncultivated grasses in small grain production areas may be a useful strategy for detecting potentially new prevailing virulent biotypes of the greenbug.

  1. Oleate lipase activity in Gardnerella vaginalis and reconsideration of existing biotype schemes

    Directory of Open Access Journals (Sweden)

    Moncla Bernard J

    2009-04-01

    Full Text Available Abstract Background Gardnerella vaginalis is a facultative gram positive organism that requires subculture every 1–2 days to maintain viability. It has been linked with bacterial vaginosis (BV, a syndrome that has been associated with increased risk for preterm delivery, pelvic inflammatory disease and HIV acquisition. About 10% of the G. vaginalis isolates have been reported to produce sialidase, but there have not been any studies relating sialidase production and biotype. Sialidase activity is dramatically increased in the vaginal fluid of women with BV and bacterial sialidases have been shown to increase the infectivity of HIV in vitro. There are 8 different biotypes of G. vaginalis. Biotypes 1–4 produce lipase and were reported to be associated with BV and the association of these biotypes with BV is under dispute. Other studies have demonstrated that G. vaginalis biotype 1 can stimulate HIV-1 production. Because of the discrepancies in the literature we compared the methods used to biotype G. vaginalis and investigated the relationship of biotype and sialidase production. Results A new medium for maintenance of Gardnerella vaginalis which allows survival for longer than one week is described. Some isolates only grew well under anaerobic conditions. Sialidase producing isolates were observed in 5 of the 6 biotypes tested. Using 4-methylumbelliferyl-oleate to determine lipase activity, instead of egg yolk agar, resulted in erroneous biotypes and does not provide reliable results. Conclusion Previous studies associating G. vaginalis biotype with bacterial vaginosis were methodologically flawed, suggesting there is not an association of G. vaginalis biotypes and bacterial vaginosis. Sialidase activity was observed in 5 of the 8 biotypes.

  2. Distribution of Streptococcus mutans biotypes in five human populations.

    Science.gov (United States)

    Keene, H J; Shklair, I L; Mickel, G J; Wirthlin, M R

    1977-01-01

    The distribution of S mutans biotypes in five geographically separated human populations was investigated. Samples of dental plaque were obtained from recruits at the US Naval Training Center in Orlando, Fl (N=49) in San Diego, Calif (N=25), and in Great Lakes, Ill (N=194), and from a sample of Hawaiian school children (N=55) and Saudi Arabian Navy personnel (N-217). Cultural and biochemical methods were used for the isolation and identification of the five different biotypes of S mutans which correlate with Bratthall's serotypes a through e. Geographic differences in S mutans biotype distribution were most apparent when the Saudi Arabian sample was compared to the other four groups. Single and multiple biotypes were observed in each group. Multiple biotypes occurred most frequently in the Saudi Arabians. Biotypes a and b were rarely observed; c was the most common in each of the populations; and d and e were more prevalent in the Saudi Arabians than in the other groups. Because of the multifactorial nature of dental caries, caution should be exercised in the interpretation of population differences in caries experience that seem to be associated with differences in S mutans-type distribution.

  3. Culture-negative prosthetic valve endocarditis with concomitant septicemia due to a nontoxigenic Corynebacterium diphtheriae biotype gravis isolate in a patient with multiple risk factors.

    Science.gov (United States)

    Clinton, Lani Kai; Bankowski, Matthew J; Shimasaki, Teppei; Sae-Ow, Wichit; Whelen, A Christian; O'Connor, Norman; Kim, Wesley; Young, Royden

    2013-11-01

    A 54-year-old female with a prosthetic mitral valve presented with a 3-day history of dizziness, subjective fever, and chills. Blood cultures were positive for a pleomorphic Gram-positive rod. Initial phenotypic testing could only support the identification of a Corynebacterium species. Nucleic acid sequencing (16S rRNA) and matrix-assisted laser desorption ionization-time of flight mass spectrometry (MALDI-TOF MS) were conclusive for Corynebacterium diphtheriae. Definitive phenotypic testing classified the strain as nontoxigenic C. diphtheriae biotype Gravis.

  4. Genome Sequence of the "Indian Bison Type" Biotype of Mycobacterium avium subsp. paratuberculosis Strain S5.

    Science.gov (United States)

    Singh, Shoor Vir; Kumar, Naveen; Singh, Shree Narayan; Bhattacharya, Tapas; Sohal, Jagdip Singh; Singh, Pravin Kumar; Singh, Ajay Vir; Singh, Brajesh; Chaubey, Kundan Kumar; Gupta, Saurabh; Sharma, Nitu; Kumar, Shailesh; Raghava, Gajendra Pal Singh

    2013-01-01

    We report the 4.79-Mb genome sequence of the "Indian Bison Type" biotype of Mycobacterium avium subsp. paratuberculosis strain S5, isolated from a terminally sick Jamunapari goat at the CIRG (Central Institute for Research on Goats) farm in India. This draft genome will help in studying novelties of this biotype, which is widely distributed in animals and human beings in India.

  5. Independent Emergence of Yersinia ruckeri Biotype 2 in the United States and Europe

    DEFF Research Database (Denmark)

    Welch, Timothy J.; Verner-Jeffreys, David W.; Dalsgaard, Inger

    2011-01-01

    Biotype 2 (BT2) variants of the bacterium Yersinia ruckeri are an increasing disease problem in U.S. and European aquaculture and have been characterized as serovar 1 isolates that lack both peritrichous flagella and secreted phospholipase activity. The emergence of this biotype has been associat...

  6. Serological characterization of Actinobacillus pleuropneumoniae biotype 1 strains antigenically related to both serotypes 2 and 7

    DEFF Research Database (Denmark)

    Nielsen, R.; Andresen, Lars Ole; Plambeck, Tamara

    1996-01-01

    Nine Danish Actinobacillus pleuropneumoniae biotype 1 isolates were shown by latex agglutination and indirect haemagglutination to possess capsular polysaccharide epitopes identical to those of serotype 2 strain 1536 (reference strain of serotype 2) and strain 4226 (Danish serotype 2 strain...

  7. Genomic DNA fingerprint analysis of biotype 1 Gardnerella vaginalis from patients with and without bacterial vaginosis.

    Science.gov (United States)

    Wu, S R; Hillier, S L; Nath, K

    1996-01-01

    Of the 20 biotype 1 Gardnerella vaginalis isolates analyzed, 10 from patients with bacterial vaginosis and 10 from patients without bacterial vaginosis, none shared the same DNA fingerprint. However, a 1.18-kb HindIII fragment was common among 18 of the 20 biotype 1 isolates in a restriction fragment length polymorphism analysis with a 7.9-kb G. vaginalis DNA probe. PMID:8748302

  8. A modified scheme for biotyping Gardnerella vaginalis.

    Science.gov (United States)

    Benito, R; Vazquez, J A; Berron, S; Fenoll, A; Saez-Neito, J A

    1986-06-01

    A scheme is proposed for biotyping Gardnerella vaginalis, based on detection of hippurate hydrolysis, beta-galactosidase (ONPG) and lipase, and fermentation of arabinose, galactose and xylose. Seventeen biotypes were found among 197 strains from asymptomatic women and patients with bacterial vaginosis (non-specific vaginitis). The distribution of biotypes was similar in both populations but some biotypes were found more frequently in patients. The proposed scheme is compared with those previously described.

  9. Identification of beer spoilage microorganisms using the MALDI Biotyper platform.

    Science.gov (United States)

    Turvey, Michelle Elizabeth; Weiland, Florian; Meneses, Jon; Sterenberg, Nick; Hoffmann, Peter

    2016-03-01

    Beer spoilage microorganisms present a major risk for the brewing industry and can lead to cost-intensive recall of contaminated products and damage to brand reputation. The applicability of molecular profiling using matrix-assisted laser desorption/ionisation time-of-flight mass spectrometry (MALDI-TOF MS) in combination with Biotyper software was investigated for the identification of beer spoilage microorganisms from routine brewery quality control samples. Reference mass spectrum profiles for three of the most common bacterial beer spoilage microorganisms (Lactobacillus lindneri, Lactobacillus brevis and Pediococcus damnosus), four commercially available brewing yeast strains (top- and bottom-fermenting) and Dekkera/Brettanomyces bruxellensis wild yeast were established, incorporated into the Biotyper reference library and validated by successful identification after inoculation into beer. Each bacterial species could be accurately identified and distinguished from one another and from over 5600 other microorganisms present in the Biotyper database. In addition, wild yeast contaminations were rapidly detected and distinguished from top- and bottom-fermenting brewing strains. The applicability and integration of mass spectrometry profiling using the Biotyper platform into existing brewery quality assurance practices within industry were assessed by analysing routine microbiology control samples from a local brewery, where contaminating microorganisms could be reliably identified. Brewery-isolated microorganisms not present in the Biotyper database were further analysed for identification using LC-MS/MS methods. This renders the Biotyper platform a promising candidate for biological quality control testing within the brewing industry as a more rapid, high-throughput and cost-effective technology that can be tailored for the detection of brewery-specific spoilage organisms from the local environment.

  10. Study of molecular subtypes of biotype 1A Yersinia enterocolitica in Shandong province from 2008 to 2009%2008-2009年山东省生物1A型小肠结肠炎耶尔森菌分子亚型的研究

    Institute of Scientific and Technical Information of China (English)

    孙文魁; 胡彬; 毕振旺; 寇增强; 侯配斌; 王鑫; 毕振强

    2012-01-01

    Objective To investigate the molecular subtypes of 73 strains of Yersinia enterocolitica biotype 1A isolated in Shandong province by PFGE,and thereby to analyze the relationship between PFGE typing and biological characteristics.Methods Seventy-three strains of Yersinia enterocolitica biotype 1A were isolated from animal feces and meat pnoducts in Gaomi city and Wulian county in Shandong province from 2008 to 2009.Motility test,serum agglutination and virulent genes detection by PCR were used to learn the biological characteristics of the isolated strains.The molecular subtypes were determined by PFGE,whose relationships with motility,serotypes and virulent genotypes were also analyzed.Results Out of the 73strains of Yersinia enterocolitica,5 showed medium-active motility while the other 68 showed well-active motility.The dominated serotypes were O∶ 5 (17/73) and O∶ 8 (14/73),followed by O∶ 9 (5/73) and O∶ 7,8(1/73),and there was no O∶ 3 serotype found.Meanwhile,36 strains couldn't be serotyped.All the strains were negative with the gene ail,ystA,yadA and virF,yet the positive rate of ystB gene was 72.6%(53/73).The 73 strains of Yersinia enterocolitica isolated could be subtyped into 54 PFGE patterns (K6GN11SD0001-K6GN11SD0054),most of which only had 1 or 2 isolated strains,and no pattern was dominant.The strains in the same or similar cluster were from different hosts; each serotype and toxic genotype scattered in the clustering trees,without specific correlation with PFGE subtypes.4 out of 5 strains,which showed medium-active motility,belonged to one branch,with the similarity coefficient at 80.9%-100.0% ; while all the toxic genotype belonged to type B.Conclusion Biotype 1A Yersinia enterocolitica has many clones,whose PFGE types had relations with motility but no relations with virulent genotype and host.%目的 对山东省73株生物1A型小肠结肠炎耶尔森菌分离株进行PFGE分型,分析菌株相关性及PFGE分型与菌株

  11. The limitations of pulsed-field gel electrophoresis for analysis of Yersinia enterocolitica isolates.

    Science.gov (United States)

    Gilpin, B J; Robson, B; Lin, S; Hudson, J A; Weaver, L; Dufour, M; Strydom, H

    2014-09-01

    This study describes the analysis of 432 isolates of Yersinia enterocolitica by pulsed-field gel electrophoresis (PFGE). PFGE had a high level of discrimination with biotype 1A isolates (Simpson's Diversity Index 0.997), but with the clinically important biotypes 2, 3 and 4, the discriminatory ability of PFGE was so low as to severely limit its usefulness (DI <0.6). For biotypes 2, 3 and 4, 79% or more of isolates of each biotype were of just three different PFGE profiles. Because of this, four known outbreaks of yersiniosis would not have been identified by PFGE analysis. However, a previously unrecognized potential outbreak of yersiniosis caused by biotype 4 isolates was identified on the basis of a rare PFGE genotype with spatial and temporal clustering. We conclude that PFGE has a very limited application to the genotyping of Y. enterocolitica biotypes 2, 3 and 4, and inferences based on finding indistinguishable PFGE profiles among cases or between cases and sources need to be substantiated using alternative typing tools, or strong epidemiological evidence.

  12. Epidemiological usefulness of changes in hemolytic activity of Vibrio cholerae biotype El Tor during the seventh pandemic.

    OpenAIRE

    Barrett, T J; Blake, P A

    1981-01-01

    Hemolytic Vibrio cholerae biotype El Tor strains were isolated in the United States in 1973 and 1978 after they had supposedly disappeared worldwide during the 1960s and 1970s. We decided to examine the change in prevalence of hemolytic El Tor strains since the beginning of the seventh pandemic and evaluate the usefulness of hemolytic activity as an epidemiological marker. A total of 48 isolates of V. cholerae biotype El Tor isolated in the Eastern Hemisphere between 1960 and 1979, along with...

  13. Longitudinal study of the biotypes of Gardnerella vaginalis.

    OpenAIRE

    Briselden, A M; Hillier, S L

    1990-01-01

    Gardnerella vaginalis is the predominant vaginal microorganism in women with bacterial vaginosis. However, this organism is also frequently isolated from women without signs or symptoms of vaginitis. Earlier studies have not revealed whether certain biotypes of G. vaginalis are more often associated with bacterial vaginosis or are more common in women who acquire bacterial vaginosis. We used a typing scheme based on tests for beta-galactosidase, hippurate hydrolysis, and lipase, using oleate ...

  14. Genomic profile of antibiotic resistant, classical ctxB positive Vibrio cholerae O1 biotype El Tor isolated in 2003 and 2005 from Puri, India: A retrospective study

    Directory of Open Access Journals (Sweden)

    T Bhotra

    2016-01-01

    Full Text Available Objectives: To examine eight strains of Vibrio cholerae O1 isolated in 2003 and 2005 from Puri, India, for antibiotic susceptibility, presence of virulence and regulatory genes, cholera toxin (CT production, CTX arrangement and genomic profiles. Materials and Methods: Bacterial strains were tested for antibiotic susceptibility using disc diffusion assay. Polymerase chain reaction determined the presence of antibiotic resistance, virulence and regulatory genes. To determine the type of cholera toxin subunit B (ctxB, nucleotide sequencing was performed. Southern hybridisation determined the number and arrangement of CTXΦ. Ribotyping and pulsed-field gel electrophoresis (PFGE were used to determine the genomic profile of isolates. Results: All the eight strains, except one strain, showed resistant to nalidixic acid, sulphamethoxazole, streptomycin and trimethoprim and possessed the sullI, strB, dfrA1 and int SXT genes. All the strains carried the toxin-co-regulated pilus pathogenicity island, the CTX genetic element, the repeat in toxin and produced CT. Restriction fragment length polymorphism (RFLP analysis showed that V. cholerae O1 possess a single copy of the CTX element flanked by tandemly arranged RS element. Nucleotide sequencing of the ctxB gene showed the presence of classical ctxB. RFLP analysis of conserved rRNA gene showed two ribotype patterns. PFGE analysis also showed at least three PFGE patterns, irrespective of year of isolations, indicating the genomic relatedness among them. Conclusion: Overall, these data suggest that classical ctxB-positive V. cholerae O1 El Tor strains that appeared in 2003 continue to cause infection in 2005 in Puri, India, and belong to identical ribotype(s and/or pulsotype(s. There is need to continuous monitor the emergence of variant of El Tor because it will improve our understanding of the evolution of new clones of variant of V. cholerae.

  15. Soft tissue biotype affects implant success.

    Science.gov (United States)

    Lee, Angie; Fu, Jia-Hui; Wang, Hom-Lay

    2011-06-01

    The influence of tissue biotype in natural dentition is already well demonstrated in the literature, with numerous articles showing that thicker tissue is a preferred biotype for optimal surgical and prosthetic outcomes. In this same line of thought, current studies are directed to explore whether mucosal thickness would have similar implications around dental implants. The purpose of this review was to investigate the effects of soft tissue biotype in relation to success of implant therapy. The influence of tissue biotype was divided into 3 main categories: its relationship with periimplant mucosa and the underlying bone, immediate implant placement, and restorative outcomes. Soft tissue biotype is an important parameter to consider in achieving esthetic implant restoration, improving immediate implant success, and preventing future mucosal recession.

  16. Comparison of two commercial kits for identifying and biotyping Haemophilus parainfluenzae.

    Science.gov (United States)

    Warren, M; Ahmet, Z; Houang, E

    1991-01-01

    The Minitek system and the more recently introduced Micro Scan HNID panels for the identification and biotyping of 98 V dependent Haemophilus isolates were compared. Identical results were obtained for 77 isolates. The discrepancy in the results of ornithine and urease was accounted for mainly by the mismatching of the identification by the two kits. When 13 isolates of H parainfluenzae with mismatched biotypes were re-examined, the results from Micro Scan correlated with 92% of those obtained by Christensen's urea broth and 100% by the ornithine test (Lab M); the corresponding figures for Minitek were 61% and 30%, respectively. Micro Scan was easy to handle on the bench and results were ready on the same day. These results suggest that further work is required to assess these two systems for the biotyping of H parainfluenzae.

  17. Wild Birds as biological indicators of environmental pollution: biotyping and antimicrobial resistance patterns of Escherichia coli isolated from Audouin's gulls (Larus Audouinii living in the Bay of Gallipoli (Italy

    Directory of Open Access Journals (Sweden)

    Antonio Camarda

    2006-01-01

    Full Text Available E. Coli biotyping and antimicrobial succeptibility tests were performed on fortyeight cloacal swabs collected from a popoulation of Audouin's gulls ((Larus Audouinii living in the Bay of Gallipoli (Lecce, Italy. The aim was to assess the pathogenic potential of the strains the gulls carry and shed into the environment and to gain a better understanding of the microbial pollution of the aera they live in.

  18. Wild Birds as biological indicators of environmental pollution: biotyping and antimicrobial resistance patterns of Escherichia coli isolated from Audouin's gulls (Larus Audouinii living in the Bay of Gallipoli (Italy

    Directory of Open Access Journals (Sweden)

    Egidio Mallia

    2010-01-01

    Full Text Available E. Coli biotyping and antimicrobial succeptibility tests were performed on fortyeight cloacal swabs collected from a popoulation of Audouin's gulls ((Larus Audouinii living in the Bay of Gallipoli (Lecce, Italy. The aim was to assess the pathogenic potential of the strains the gulls carry and shed into the environment and to gain a better understanding of the microbial pollution of the aera they live in.

  19. Cholera outbreaks in the classical biotype era.

    Science.gov (United States)

    Siddique, A K; Cash, Richard

    2014-01-01

    In the Indian subcontinent description of a disease resembling cholera has been mentioned in Sushruta Samita, estimated to have been written between ~400 and 500 BC. It is however not clear whether the disease known today as cholera caused by Vibrio cholerae Vibrio cholerae O1 is the evolutionary progression of the ancient disease. The modern history of cholera began in 1817 when an explosive epidemic broke out in the Ganges River Delta region of Bengal. This was the first of the seven recorded cholera pandemics cholera pandemics that affected nearly the entire world and caused hundreds of thousands of deaths. The bacterium responsible for this human disease was first recognised during the fifth pandemic and was named V. cholerae which was grouped as O1, and was further differentiated into Classical and El Tor biotypes. It is now known that the fifth and the sixth pandemics were caused by the V. cholerae O1 of the Classical biotype Classical biotype and the seventh by the El Tor biotype El Tor biotype . The El Tor biotype of V. cholerae, which originated in Indonesia Indonesia and shortly thereafter began to spread in the early 1960s. Within the span of 50 years the El Tor biotype had invaded nearly the entire world, completely displacing the Classical biotype from all the countries except Bangladesh. What prompted the earlier pandemics to begin is not clearly understood, nor do we know how and why they ended. The success of the seventh pandemic clone over the pre-existing sixth pandemic strain remains largely an unsolved mystery. Why classical biotype eventually disappeared from the world remains to be explained. For nearly three decades (1963-1991) during the Seventh cholera pandemic seventh pandemic, cholera in Bangladesh has recorded a unique history of co-existence of Classical and El Tor biotypes of V. cholerae O1 as epidemic and endemic strain. This long co-existence has provided us with great opportunity to improve our understanding of the disease itself

  20. Southern binary galaxies; 1, a sample of isolated pairs

    CERN Document Server

    De Lima-Soares, D S; De Carvalho, R R; de Souza, R E; de Carvalho, R R

    1994-01-01

    A catalogue of binary galaxies with 621 pairs has been determined by applying a surface density enhancement procedure to {\\it The Surface Photometry Catalogue of the ESO-Uppsala Galaxies}. The method does not require any redshift information. An additional restriction, based on objective criteria that take into account the completeness of the source catalogue, led to a sample of 189 isolated pairs which are listed. We have obtained the optical luminosity function of binary galaxies in the catalogue, from which we estimate that the luminosity density of galaxies in binaries is \\sim4\\% of that found for field galaxies. The general properties of our sample are similar to those from CPG and CMG.

  1. Outer membrane protein profiling to distinguish between Haemophilus aegyptius and non-capsulate Haemophilus influenzae biotype III.

    Science.gov (United States)

    Leaves, N I; Anderson, E C; Toy, S J

    1994-12-01

    Outer membrane protein profiling was used to assist in determining the identity of an isolate of Haemophilus spp. that was presumptively identified as non-capsulate Haemophilus influenzae biotype III. The possibility that this strain was in fact Haemophilus aegyptius was queried because of clinical information and the source of the isolate. Sodium dodecyl-sulphate polyacrylamide gel electrophoresis was used to establish the identity of the isolate as non-capsulate H. influenzae biotype III and no H. aegyptius. Generally, protein profiling compared very favourably with other standard tests for identifying H. aegyptius: the method was easily and rapidly performed and gave an unequivocal result.

  2. Smooth and Rough Biotypes of Arcanobacterium haemolyticum Can Be Genetically Distinguished at the Arcanolysin Locus.

    Directory of Open Access Journals (Sweden)

    Haley S Ruther

    Full Text Available Arcanobacterium haemolyticum is a Gram-positive, β-hemolytic emerging human pathogen that is classified into smooth or rough biotypes. This bacterial species is also a rare pathogen of animals. Smooth biotypes possess smooth colony edges, are moderate to strong in β-hemolysis, and predominately cause wound infections. In contrast, rough biotypes possess rough and irregular colony edges, have weak to no β-hemolytic activity, and predominately cause pharyngitis. Using horse erythrocytes we confirmed that smooth isolates are generally more hemolytic than rough isolates. A hemolysin from A. haemolyticum, arcanolysin (aln/ALN, was recently discovered and is a member of the cholesterol-dependent cytolysin (CDC family. PCR amplification of aln from all 36 smooth A. haemolyticum isolates yielded the expected 2.0 kb product. While 21 rough isolates yielded the 2.0 kb product, 16 isolates had a 3.2 kb product. The extra 1.2 kb segment was 99% identical to IS911 (insertion sequence from Corynebacterium diphtheriae. PCR amplification and sequence analysis of the upstream region of aln revealed ~40 nucleotide polymorphisms among 73 clinical isolates from Finland, Denmark, Germany and United States (Nebraska. Remarkably, multi-sequence alignments of the aln upstream region demonstrated that ~90% of the isolates phylogenetically clustered as either smooths or roughs. Differential restriction enzyme analysis of the aln upstream region also demonstrated that the aln upstream region of most (~75% smooth isolates was cleaved with ClaI while this region in most (~86% rough isolates was cleaved with XcmI. We conclude that the aln upstream region can be used to genetically distinguish between smooth and rough biotypes of this important emerging pathogen.

  3. Compatible results obtained from biotyping and serotyping in Serratia marcescens.

    Science.gov (United States)

    Grimont, P A; Grimont, F; Le Minor, S; Davis, B; Pigache, F

    1979-10-01

    The correspondence between complete serotype and biotype (P.A.D. Grimont and F. Grimont, J. Clin. Microbiol. 8:73-83, 1978) of 474 Serratia marcescens strains was studied. Of 127 serotypes, 70 were represented by two or more strains of the same serotype belonged to one biotype. However, for 91% of serotypes, strains of the same serotype belonged to one biogroup--i.e., a group of closely related biotypes. Biogroups are A1 (A1a, A1b); A2/6 (A2a, A2b, A6a, A6b); A3 (A3a, A3b, A3c, A3d); A4 (A4a, A4b); A5/8 (A5, A8a, A8b, A8c); and TCT (TCT, TT). Only two serotypes were composed of a mixture of pigmented and nonpigmented biogroups. Pigmented biogroups (A1 and A2/6) were otherwise differentiated from nonpigmented biogroups (A3, A4, A5/8, and TCT) by serotyping. Some biogroups preferentially occurred in some O serogroups: A4 in 01; A2/6 in O6, O8, and O14; and A3 in O9, O12, and O15. Three H serogroups were found to be biochemically homogeneous: H1, H7, and H20 were respectively and uniquely composed of biogroups A4, TCT, and A3. A square matrix of O versus H serogroups, with the corresponding biogroup for each O X H combination, was used for comparisons between O groups and between H groups. Identical patterns of biogroups were shown by serogroups O6, O8, and O14. Taxonomical, ecological, and practical consequences of these findings are discussed.

  4. Immersion vaccination against Yersinia ruckeri O1, biotype 2 confers cross protection against Y. ruckeri O1 biotype 1

    DEFF Research Database (Denmark)

    Raida, Martin Kristian; Neumann, Lukas; Kragelund Strøm, Helene

    organs (head kidney, spleen, liver, brain, muscle, heart, intestine, skin and gill). Seven days post infection 40% of mock-vaccinated fish were still heavy infected, which corresponds well with overall mortality in this group (35%). In general pro-inflammatory cytokine expression was higher in the mock-vaccinated......A new biotype 2 of Y. ruckeri O1, which lacks motility has proven highly virulent for rainbow trout, and is causing disease in cultured trout even in fish vaccinated with commercial ERM biotype 1 vaccines. Not much is known about immunity against biotype 2, and therefore have we produced a Y....... ruckeri O1 biotype 2 immersion vaccine and tested the protection against both Y. ruckeri biotype 1 and 2 infections. Seven months post vaccination, both vaccinated and mock-vaccinated groups of rainbow trout were bath challenged with Y. ruckeri serotype O1, biotype 1 or 2. Challenge with biotype 2...

  5. Oleate lipase activity in Gardnerella vaginalis and reconsideration of existing biotype schemes

    OpenAIRE

    Moncla Bernard J; Pryke Kara M

    2009-01-01

    Abstract Background Gardnerella vaginalis is a facultative gram positive organism that requires subculture every 1–2 days to maintain viability. It has been linked with bacterial vaginosis (BV), a syndrome that has been associated with increased risk for preterm delivery, pelvic inflammatory disease and HIV acquisition. About 10% of the G. vaginalis isolates have been reported to produce sialidase, but there have not been any studies relating sialidase production and biotype. Sialidase activi...

  6. Evaluation of culture methods for rapid screening of swine faecal samples for Yersinia enterocolitica O : 3 biotype 4

    DEFF Research Database (Denmark)

    Hoorfar, Jeffrey; Holmvig, C.B.F.

    1999-01-01

    In two studies, seven different culture protocols were compared to test naturally contaminated faecal samples from pigs for isolation of Y. enterocolitica serotype O; 3/biotype 4( n = 70 and n = 79). Four of the protocols were based on the Nordic Committee on Food Analysis (NMKL protocols), while...

  7. Proteomic-based biotyping reveals hidden diversity within a microalgae culture collection: An example using Dunaliella

    Science.gov (United States)

    Emami, Kaveh; Hack, Ethan; Nelson, Andrew; Brain, Chelsea M.; Lyne, Fern M.; Mesbahi, Ehsan; Day, John G.; Caldwell, Gary S.

    2015-05-01

    Accurate and defendable taxonomic identification of microalgae strains is vital for culture collections, industry and academia; particularly when addressing issues of intellectual property. We demonstrate the remarkable effectiveness of Matrix Assisted Laser Desorption Ionisation Time of Flight Mass Spectrometry (MALDI-TOF-MS) biotyping to deliver rapid and accurate strain separation, even in situations where standard molecular tools prove ineffective. Highly distinctive MALDI spectra were obtained for thirty two biotechnologically interesting Dunaliella strains plus strains of Arthrospira, Chlorella, Isochrysis, Tetraselmis and a range of culturable co-occurring bacteria. Spectra were directly compared with genomic DNA sequences (internal transcribed spacer, ITS). Within individual Dunaliella isolates MALDI discriminated between strains with identical ITS sequences, thereby emphasising and enhancing knowledge of the diversity within microalgae culture collections. Further, MALDI spectra did not vary with culture age or growth stage during the course of the experiment; therefore MALDI presents stable and accurate strain-specific signature spectra. Bacterial contamination did not affect MALDI’s discriminating power. Biotyping by MALDI-TOF-MS will prove effective in situations wherein precise strain identification is vital, for example in cases involving intellectual property disputes and in monitoring and safeguarding biosecurity. MALDI should be accepted as a biotyping tool to complement and enhance standard molecular taxonomy for microalgae.

  8. Heterogeneity in restriction patterns of Gardnerella vaginalis isolates from individuals with bacterial vaginosis.

    Science.gov (United States)

    Nath, K; Devlin, D; Beddoe, A M

    1992-02-01

    This study was undertaken to resolve the genetic make up of Gardnerella vaginalis present in bacterial vaginosis (BV). DNA from several G. vaginalis isolates from within and between individual BV patients were compared by BamHI, ClaI and EcoRI restriction endonuclease analysis (REA) followed by a restriction fragment length polymorphism (RFLP) study, utilizing a 5.7-kb BamHI G. vaginalis ATCC14018 DNA probe. Four G. vaginalis isolates from one patient (GVP-062) were composed of 3 different biotypes (biotypes 3, 5 and 8), and while the REA mirrored the biotype, in RFLP studies at least 3 isolates had DNA fragments in common. All of the isolates from 2 other patients (GVP-063 and GVP-072) represented a single biotype (biotype 2), but under REA and in RFLP studies, the isolates GVP-063 differed from GVP-072. An opposite case existed with the isolates GVP-072 (biotype 2) and GVP-065 (biotype 5), which appeared similar under REA and in RFLP studies. Finally, reisolates after 8 weeks (GVP-080) from a BV patient (isolates GVP-065) representing the same biotype (biotype 5) differed under REA and in RFLP studies. Thus, lacking any unique DNA fingerprint, G. vaginalis occurring in BV represents a (genetically) mixed population.

  9. Distribution of biotypes and leukotoxic activity of Aggregatibacter actinomycetemcomitans isolated from Brazilian patients with chronic periodontitis Distribuição de biótipos e atividade leucotóxica de Aggregatibacter actinomycetemcomitans isolados de pacientes brasileiros com periodontite crônica

    Directory of Open Access Journals (Sweden)

    Elerson Gaetti-Jardim Jr.

    2008-12-01

    Full Text Available Aggregatibacter actinomycetemcomitans is an important etiologic agent of the periodontitis and is associated with extra-oral infections. In this study, the detection of the ltxA gene as well as the ltx promoter region from leukotoxic A. actinomycetemcomitans isolated from 50 Brazilian patients with periodontitis and 50 healthy subjects was performed. The leukotoxic activity on HL-60 cells was also evaluated. Leukotoxic activity was determined using a trypan blue exclusion method. The 530 bp deletion in the promoter region was evaluated by PCR using a PRO primer pair. A. actinomycetemcomitans was detected by culture and directly from crude subgingival biofilm by PCR using specific primers. By culture, A. actinomycetemcomitans was detected in nine (18% of the periodontal patients and one (2% healthy subject. However, by PCR, this organism was detected in 44% of the periodontal patients and in 16% of the healthy subjects. It was verified a great discrepancy between PCR detection of the ltx operon promoter directly from crude subgingival biofilm and from bacterial DNA. Only one periodontal sample harbored highly leukotoxic A. actinomycetemcomitans. Moreover, biotype II was the most prevalent and no correlation between biotypes and leukotoxic activity was observed. The diversity of leukotoxin expression by A. actinomycetemcomitans suggests a role of this toxin in the pathogenesis of periodontal disease and other infectious diseases.Aggregatibacter actinomycetemcomitans é um importante agente etiológico da periodontite e produz infecções extra-bucais. Neste estudo, foram detectados os biótipos, o gene ltxA associado à produção de leucotoxina e o promotor ltx em A. actinomycetemcomitans de pacientes com e sem periodontite. A atividade leucotóxica sobre células HL-60 também foi avaliada. A atividade leucotóxica foi determinada através do método de exclusão do azul de tripam. A deleção de 530 bp no promotor ltx foi avaliada usando-se o

  10. Selective Inhibition of Bakuchicin Isolated from Psoralea corylifolia on CYP1A in Human Liver Microsomes

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    Sun Joo Kim

    2016-01-01

    Full Text Available Bakuchicin is a furanocoumarin isolated from Psoralea corylifolia and shows several biological activities. Although there have been studies on the biological effects of bakuchicin, its modulation potency of CYP activities has not been previously investigated. Here, we investigated the inhibitory effects of bakuchicin on the activities of CYP isoforms by using a cocktail of probe substrates in pooled human liver microsomes (HLMs and human recombinant cDNA-expressed CYP. Bakuchicin strongly inhibited CYP1A-mediated phenacetin O-deethylation with an IC50 value of 0.43 μM in HLMs. It was confirmed by human recombinant cDNA-expressed CYP1A1 and CYP1A2 with a Ki value of 0.11 μM and 0.32 μM, respectively. A Lineweaver-Burk plot indicated that the inhibition mechanism of bakuchicin was competitive inhibition. Overall, this is the first study to investigate the potential CYP1A1 and CYP1A2 inhibition associated with bakuchicin and to report its competitive inhibitory effects on HLMs.

  11. Isolation and characterization of three cassava elongation factor 1 alpha (MeEF1A promoters.

    Directory of Open Access Journals (Sweden)

    Sony Suhandono

    Full Text Available In plant genetic engineering, the identification of gene promoters leading to particular expression patterns is crucial for the development of new genetically modified plant generations. This research was conducted in order to isolate and characterize several new promoters from cassava (Manihot esculenta Crantz elongation factor 1 alpha (EF1A gene family.Three promoters MeEF1A3, MeEF1A5 and MeEF1A6 were successfully isolated [corrected]. Sequence analyses showed that all of the promoters contain three conserved putative cis-acting elements which are located upstream of the transcription start site. These elements are included a TEF1, a TELO and TATA boxes. In addition, all of the promoters also have the 5'UTR intron but with a different lengths. These promoters were constructed translationally with gusA reporter gene (promoter::gusA fusion in pBI-121 binary vector to build a new binary vector using Overlap Extension PCR Cloning (OEPC technique. Transient expression assay that was done by using agroinfiltration method was used to show functionality of these promoters. Qualitative and quantitative analysis from GUS assay showed that these promoters were functional and conferred a specific activity in tobacco seedlings (Nicotiana tabacum, tomato fruits (Solanum lycopersicum and banana fruits (Musa acuminata. We hypothesized that MeEF1A6 could be categorized as a constitutive promoter because it was able to drive the gene expression in all transformed tissue described in here and also comparable to CaMV35S. On the other hand, MeEF1A3 drove specific expression in the aerial parts of seedlings such as hypocotyl and cotyledon thus MeEF1A5 drove specific expression in fruit tissue. The results obtained from transient analysis showed that these promoters had a distinct activity although they came from same gene family. The DNA sequences identified here are new promoters potentially use for genetic engineering in cassava or other plants.

  12. DEVELOPMENT OF A YERSINIA RUCKERI O1 BIOTYPE 2 WATERBORNE CHALLENGE MODEL FOR FUTURE ERM VACCINE TESTING IN RAINBOW TROUT

    DEFF Research Database (Denmark)

    Kragelund Strøm, Helene; Aalbæk, Bent; Otani, Maki;

    from ERM outbreaks in Danish rainbow trout farms during 2011. Some of the isolates were obtained from vaccinated stocks, which subsequently developed ERM disease outbreaks. The Y.r. O1 isolates have been characterized and biotyped according to mobility and hydrolysis of Tween-80, and almost all......1 bt 2 has made it possible to develop a standardized bath challenge model which is needed in order to test and develop new experimental vaccines which are expected to induce immunity against Y.r. O1 bt 2.......Yersinia ruckeri (Y.r.) O1 biotype (bt) 2 causes outbreaks of Enteric Redmouth disease (ERM) in vaccinated, farmed rainbow trout around the world. Y.r. O1 bt 1 has been known since first described from the Hagerman Valley in Idaho in the 1950’s and outbreaks have now been controlled by vaccination...

  13. Identification of Aphis gossypii Glover (Hemiptera: Aphididae Biotypes from Different Host Plants in North China.

    Directory of Open Access Journals (Sweden)

    Li Wang

    Full Text Available The cotton-melon aphid, Aphis gossypii Glover (Hemiptera: Aphididae, is a polyphagous species with a worldwide distribution and a variety of biotypes. North China is a traditional agricultural area with abundant winter and summer hosts of A. gossypii. While the life cycles of A. gossypii on different plants have been well studied, those of the biotypes of North China are still unclear.Host transfer experiments showed that A. gossypii from North China has two host-specialized biotypes: cotton and cucumber. Based on complete mitochondrial sequences, we identified a molecular marker with five single-nucleotide polymorphisms to distinguish the biotypes. Using this marker, a large-scale study of biotypes on primary winter and summer hosts was conducted. All A. gossypii collected from three primary hosts-hibiscus, pomegranate, and Chinese prickly ash-were cotton biotypes, with more cotton-melon aphids found on hibiscus than the other two species. In May, alate cotton and cucumber biotypes coexisted on cotton and cucumber seedlings, but each preferred its natal host. Both biotypes existed on zucchini, although the cucumber biotype was more numerous. Aphids on muskmelon were all cucumber biotypes, whereas most aphids on kidney bean were cotton biotypes. Aphids on seedlings of potato and cowpea belong to other species. In August, aphids on cotton and cucumber were the respective biotypes, with zucchini still hosting both biotypes as before. Thus, the biotypes had different fitnesses on different host plants.Two host-specialized biotypes (cotton and cucumber are present in North China. Hibiscus, pomegranate, and Chinese prickly ash can serve as winter hosts for the cotton biotype but not the cucumber biotype in North China. The fitnesses of the two host-specialized biotypes differ on various summer hosts. When alate aphids migrate to summer hosts, they cannot accurately land on the corresponding plant.

  14. Isolation and characterization of highly replicable hepatitis C virus genotype 1a strain HCV-RMT.

    Science.gov (United States)

    Arai, Masaaki; Tokunaga, Yuko; Takagi, Asako; Tobita, Yoshimi; Hirata, Yuichi; Ishida, Yuji; Tateno, Chise; Kohara, Michinori

    2013-01-01

    Multiple genotype 1a clones have been reported, including the very first hepatitis C virus (HCV) clone called H77. The replication ability of some of these clones has been confirmed in vitro and in vivo, although this ability is somehow compromised. We now report a newly isolated genotype 1a clone, designated HCV-RMT, which has the ability to replicate efficiently in patients, chimeric mice with humanized liver, and cultured cells. An authentic subgenomic replicon cell line was established from the HCV-RMT sequence with spontaneous introduction of three adaptive mutations, which were later confirmed to be responsible for efficient replication in HuH-7 cells as both subgenomic replicon RNA and viral genome RNA. Following transfection, the HCV-RMT RNA genome with three adaptive mutations was maintained for more than 2 months in HuH-7 cells. One clone selected from the transfected cells had a high copy number, and its supernatant could infect naïve HuH-7 cells. Direct injection of wild-type HCV-RMT RNA into the liver of chimeric mice with humanized liver resulted in vigorous replication, similar to inoculation with the parental patient's serum. A study of virus replication using HCV-RMT derivatives with various combinations of adaptive mutations revealed a clear inversely proportional relationship between in vitro and in vivo replication abilities. Thus, we suggest that HCV-RMT and its derivatives are important tools for HCV genotype 1a research and for determining the mechanism of HCV replication in vitro and in vivo.

  15. Isolation and characterization of highly replicable hepatitis C virus genotype 1a strain HCV-RMT.

    Directory of Open Access Journals (Sweden)

    Masaaki Arai

    Full Text Available Multiple genotype 1a clones have been reported, including the very first hepatitis C virus (HCV clone called H77. The replication ability of some of these clones has been confirmed in vitro and in vivo, although this ability is somehow compromised. We now report a newly isolated genotype 1a clone, designated HCV-RMT, which has the ability to replicate efficiently in patients, chimeric mice with humanized liver, and cultured cells. An authentic subgenomic replicon cell line was established from the HCV-RMT sequence with spontaneous introduction of three adaptive mutations, which were later confirmed to be responsible for efficient replication in HuH-7 cells as both subgenomic replicon RNA and viral genome RNA. Following transfection, the HCV-RMT RNA genome with three adaptive mutations was maintained for more than 2 months in HuH-7 cells. One clone selected from the transfected cells had a high copy number, and its supernatant could infect naïve HuH-7 cells. Direct injection of wild-type HCV-RMT RNA into the liver of chimeric mice with humanized liver resulted in vigorous replication, similar to inoculation with the parental patient's serum. A study of virus replication using HCV-RMT derivatives with various combinations of adaptive mutations revealed a clear inversely proportional relationship between in vitro and in vivo replication abilities. Thus, we suggest that HCV-RMT and its derivatives are important tools for HCV genotype 1a research and for determining the mechanism of HCV replication in vitro and in vivo.

  16. Association of plasmid typing to biotyping and antibiotyping in the characterization of outbreaks by Acinetobacter baumannii

    Directory of Open Access Journals (Sweden)

    Maria Cristina Bronharo Tognim

    1999-01-01

    Full Text Available During an outbreak at an University Hospital, from April to September, in 1994, sixteen strains of Acinetobacter baumannii were isolated from patients and one strain from an enteral solution. We afterwards analyzed the outbreak by means of plasmid typing, antibiotic resistance typing and biotyping. Two main plasmid profiles were identified. Twelve strains belonged to biotype 2, and five to biotype 19. Susceptibility to amikacin and to carbenicillin allowed classification of the strains into two groups. The results show that association of those three typing methods allowed the differentiation of what was at first considered as a single outbreak into two apparently unrelated outbreaks.Durante um surto ocorrido de abril a setembro de 1994 em um Hospital Universitário, dezesseis cepas de Acinetobacter baumannii foram isoladas de pacientes e uma de solução enteral. Nós posteriormente analizamos as cepas isoladas durante o surto pelos seguintes métodos de tipagem : perfil de DNA plasmidial, perfil de antibiograma e biotipagem. Dois padrões de tipagem foram identificados pela análise do perfil plasmidial. Doze cepas foram caracterizadas como sendo do biotipo 2, e cinco do biotipo 19. O padrão de sensibilidade a amicacina e a carbenicilina possibilitou a classificação das cepas em dois grupos. Os resultados demonstraram que estes três métodos de tipagem associados possibilitaram a diferenciação do que primeiramente foi considerado como um único surto, em dois surtos aparentemente não relacionados.

  17. Familial isolated primary pigmented nodular adrenocortical disease associated with a novel low penetrance PRKAR1A gene splice site mutation

    DEFF Research Database (Denmark)

    Storr, Helen L; Metherell, Louise A; Dias, Renuka;

    2010-01-01

    Primary pigmented nodular adrenocortical disease (PPNAD) is associated with inactivating germline protein kinase A regulatory subunit type 1-alpha (PRKAR1A) mutations and loss of heterozygosity at the 17q22-24 locus in approximately 50% patients. PRKAR1A mutations are observed in both isolated PP...

  18. Identification of three major Bemisia tabaci biotypes in China based on morphological and DNA polymorphisms

    Institute of Scientific and Technical Information of China (English)

    Baoli Qiu; Yanping Chen; Li Liu; Weilu Peng; Xiaoxi Li; Yuzhou Du; Shunxiang Ren

    2009-01-01

    The sweet potato whitefly, Bemisia tabaci, is a complex species, and many of its biotypes are important agricultural pests. The B and Q biotypes are invasive and coexist with the native Cv biotype on vegetable and ornamental crops in China. In this study, these three bio-types were identified based on their morphological characteristics, RAPD-PCR analysis, and DNA sequences of the COl gene. The ante-rior and posterior wax fringes of the B, Q, and Cv biotypes significantly differed from each other. Based on this morphological characteristic, the three biotypes can easily be distinguished in greenhouses and fields. Genomic DNA RAPD-PCR band patterns also revealed differences between these biotypes using the H16 primer. The B biotype has three bright DNA bands between 250 and 600 bp, the Q biotype only has one bright band at ~300 bp, while the Cv biotype has no band between 250 and 500 bp. Both the Cv and Q biotypes have two bright bands at ~750 and 1000 bp while the B biotype has only one band at ~1000 bp. Based on the COI gene, the genetic identity between B and Cv, B and Q, and Q and CV was 85.8%, 94.7%, and 86.0%, respectively. The MP tree indicated that the phylogenetic relationship between the B and Q biotypes is much closer than that between the B and Cv or the Q and Cv biotypes. The uses of the morphological, RAPD-PCR, and DNA sequencing methods in biotype identification of B. tabaci are discussed.

  19. Studying genetic diversity of whitefly B. tabaci Egyptian isolates in relation to some worldwide isolates

    Directory of Open Access Journals (Sweden)

    Inas Farouk Fahmy

    2015-06-01

    Full Text Available Bemisia tabaci (Gennadius (Hemiptera, Aleyrodidae is considered to be one of the most damaging pests in agriculture, causing severe losses in crops worldwide, affecting the tropical and subtropical regions. Random Amplified Polymorphic DNA-Polymerase Chain Reaction (RAPD-PCR was used to assess the genetic diversity between different isolates collected from different regions in Egypt compared with some other worldwide isolates of this insect pest. Out of 12 primers 8 primers from Operon technology have shown to differentiate between 13 collected B. tabaci samples from all over Egypt and some other samples collected from different countries with two other populations representing biotypes A and B collected from the US used for biotype demarcation. Using 13 insect samples, RAPD analysis has produced a total number of 72 markers; about 68 polymorphic markers were revealed. The total number of bands obtained for each primer ranged from 4 to 14 within an average of 9 bands per primer. Of the pair wise combination among fifteen populations Ismailia population showed the highest similarity index (0.947, while US biotype A scored the lowest similarity index (0.326. Two major clusters were formed from the UPGMA dendrogram, which was constructed based on Dice similarity coefficient. RAPD-PCR screening demarcated the whitefly population based on the host species and genetic biotypes. Two major clusters have been revealed as A and B with two other minor clusters A1, A2, and B1, B2. Most of the samples collected from Egypt were clustered together in a minor cluster named A1. A1 group is divided into two sub-groups. A1a comprises the populations from Beni-Sweif in Upper Egypt, Ismailia, Kalyobia, El-Fayoum, Tanta, Kafr El-Sheikh, Alexandria, and A1b comprises Spain and Sudan. Group A1a is clustered together based on their host which belongs to the Cucurbitaceae family while Alexandria was separated individually based on its host which is cauliflower. Through

  20. Isolation and Genetic Analysis of Bovine Viral Diarrhea Virus from Infected Cattle in Indiana

    Directory of Open Access Journals (Sweden)

    Roman M. Pogranichniy

    2011-01-01

    Full Text Available Species and biotype distribution was determined in 44 bovine viral diarrhea virus- (BVDV- positive samples submitted to the Animal Disease Diagnostic Laboratory (ADDL in Indiana during 2006–2008. BVDV RNA was detected in the 5′-untranslated region and Npro region using reverse transcriptase PCR followed by sequencing analysis of the PCR product. Additionally, cases were classified into one of six categories according to history and/or lesions: acute symptomatic, hemorrhagic, respiratory distress, reproductive, persistent infection (PI, and mucosal disease (MD. Of 44 BVDV-positive samples, 33 were noncytopathic (ncp, 10 were cytopathic (cp, and one presented both ncp and cp biotypes. Sequencing analysis demonstrated that all samples belonged to BVDV-1a, BVDV-1b, or BVDV-2. The most common isolate was ncp BVDV-1b, (44% followed by ncp BVDV-2a (24%. Among the six categories, respiratory clinical signs were the most common (36% followed by PI (25% and MD (16%.

  1. Isolation and functional characterization of CsLsi1, a silicon transporter gene in Cucumis sativus.

    Science.gov (United States)

    Sun, Hao; Guo, Jia; Duan, Yaoke; Zhang, Tiantian; Huo, Heqiang; Gong, Haijun

    2017-02-01

    Cucumber (Cucumis sativus) is a widely grown cucurbitaceous vegetable that exhibits a relatively high capacity for silicon (Si) accumulation, but the molecular mechanism for silicon uptake remains to be clarified. Here we isolated and characterized CsLsi1, a gene encoding a silicon transporter in cucumber (cv. Mch-4). CsLsi1 shares 55.70 and 90.63% homology with the Lsi1s of a monocot and dicot, rice (Oryza sativa) and pumpkin (Cucurbita moschata), respectively. CsLsi1 was predominantly expressed in the roots, and application of exogenous silicon suppressed its expression. Transient expression in cucumber protoplasts showed that CsLsi1 was localized in the plasma membrane. Heterologous expression in Xenopus laevis oocytes showed that CsLsi1 evidenced influx transport activity for silicon but not urea or glycerol. Expression of cucumber CsLsi1-mGFP under its own promoter showed that CsLsi1 was localized at the distal side of the endodermis and the cortical cells in the root tips as well as in the root hairs near the root tips. Heterologous expression of CsLsi1 in a rice mutant defective in silicon uptake and the over-expression of this gene in cucumber further confirmed the role of CsLsi1 in silicon uptake. Our results suggest that CsLsi1 is a silicon influx transporter in cucumber. The cellular localization of CsLsi1 in cucumber roots is different from that in other plants, implying the possible effect of transporter localization on silicon uptake capability.

  2. Prevalence, characterization, and antimicrobial resistance of Yersinia species and Yersinia enterocolitica isolated from raw milk in farm bulk tanks.

    Science.gov (United States)

    Jamali, Hossein; Paydar, Mohammadjavad; Radmehr, Behrad; Ismail, Salmah

    2015-02-01

    The aims of this study were to investigate the prevalence and to characterize and determine the antibiotic resistance of Yersinia spp. isolates from raw milk. From September 2008 to August 2010, 446 raw milk samples were obtained from farm bulk milk tanks in Varamin, Iran. Yersinia spp. were detected in 29 (6.5%) samples, out of which 23 (79.3%), 5 (17.2%), and 1 (3.4%) were isolated from cow, sheep, and goat raw milk, respectively. The most common species isolated was Yersinia enterocolitica (65.5%), followed by Yersinia frederiksenii (31%), and Yersinia kristensenii (3.4%). Of the 19 Y. enterocolitica isolates, 14 (73.7%) were grouped into bioserotype 1A/O:9, 4 (21.1%) belonged to bioserotype 1B:O8, 1 (5.3%) belonged to bioserotype 4/O:3, and 1 isolate (biotype 1A) was not typable. All the isolates of biotypes 1B and 4harbored both the ystA and ail genes. However, all the isolates of biotype 1A were only positive for the ystB gene. The tested Yersinia spp. showed the highest percentages of resistance to tetracycline (48.3%), followed by ciprofloxacin and cephalothin (each 17.2%), ampicillin (13.8%), streptomycin (6.9%), and amoxicillin and nalidixic acid (each 3.4%). All of the tested isolates demonstrated significant sensitivity to gentamicin and chloramphenicol. Recovery of potentially pathogenic Y. enterocolitica from raw milk indicates high risks of yersiniosis associated with consumption of raw milk.

  3. Distribution and Diversity of hmw1A Among Invasive Nontypeable Haemophilus influenzae Isolates in Iran

    Science.gov (United States)

    Shahini Shams Abadi, Milad; Siadat, Seyed Davar; Vaziri, Farzam; Davari, Mehdi; Fateh, Abolfazl; Pourazar, Shahin; Abdolrahimi, Farid; Ghazanfari, Morteza

    2016-01-01

    Background: The pathogenesis of nontypeable Haemophilus influenzae (NTHi) begins with adhesion to the rhinopharyngeal mucosa. Almost 38–80% of NTHi clinical isolates produce proteins that belong to the High Molecular Weight (HMW) family of adhesins, which are believed to facilitate colonization. Methods: In the present study, the prevalence of hmwA, which encodes the HMW adhesin, was determined for a collection of 32 NTHi isolates. Restriction Fragment Length Polymorphism (RFLP) was performed to advance our understanding of hmwA binding sequence diversity. Results: The results demonstrated that hmwA was detected in 61% of NTHi isolates. According to RFLP, isolates were divided into three groups. Conclusion: Based on these observations, it is hypothesized that some strains of nontypeable Haemophilus influenzae infect some specific areas more than other parts. PMID:27141269

  4. 牙龈生物型%Gingival biotype

    Institute of Scientific and Technical Information of China (English)

    林璐

    2015-01-01

    Gingival biotype is used to describe the features of the marginal periodontium and tooth form, and it is one predicting indicator for dental implant and periodontal treatment. It was presumed that the gingival biotype in individuals may be different. Different types of gingival biotype respond to chronic stimulations differently. Current-ly, gingival biotype is clinically classified as thin or thick according to the thickness at a point 2 mm apicaly to gingival margin examined by means of transgingival probing, probe transparency, CBCT and so on. So far, the classification and characteristics of ginvival biotype are still controversial. This paper reviews the definition, classification, character-istics, measurement methods and clinical application of various gingival biotypes.%牙龈生物型泛指牙周围组织及牙体组织的形态特征,是种植、牙周等美学治疗术后成功率的预测参考因素之一. 个体间的牙龈生物型是存在差异的,并且不同的牙龈生物型对外界刺激的反应不同.目前临床上多根据龈缘下2 mm处的牙龈厚度将牙龈生物型分为厚型和薄型,其检测手段主要有直接测量法、牙周探诊法、CBCT扫描法等. 由于牙龈生物型受地域、种族、遗传、牙根位置的影响较大,目前为止,关于牙龈生物型的分型、特征等仍存在争议,尚未达成共识. 本文就牙龈生物型的定义、临床分型和特征、测量方法、临床应用等作一综述.

  5. PRKAR1A in the development of cardiac myxoma: a study of 110 cases including isolated and syndromic tumors.

    Science.gov (United States)

    Maleszewski, Joseph J; Larsen, Brandon T; Kip, Nefize Sertac; Castonguay, Mathieu C; Edwards, William D; Carney, J Aidan; Kipp, Benjamin R

    2014-08-01

    Cardiac myxoma usually occurs as a solitary mass, but occasionally develops as part of a familial syndrome, the Carney complex (CNC). Two thirds of CNC-associated cardiac myxomas exhibit mutations in PRKAR1A. PRKAR1A mutations occur in both familial and sporadic forms of CNC but have not been described in isolated (nonsyndromic) cardiac myxomas. A total of 127 consecutive cardiac myxomas surgically resected at Mayo Clinic (1993 to 2011) from 110 individuals were studied. Clinical, radiologic, and pathologic findings were reviewed. Of these, 103 patients had isolated cardiac myxomas, and 7 patients had the tumor as a component of CNC. Age and sex distributions were different for CNC (mean 26 y, range 14 to 44 y, 71% female) and non-CNC (mean 62 y, range 18 to 92 y, 63% female) patients. PRKAR1A immunohistochemical analysis (IHC) was performed, and myxoma cell reactivity was graded semiquantitatively. Bidirectional Sanger sequencing was performed in 3 CNC patients and 29 non-CNC patients, to test for the presence of mutations in all coding regions and intron/exon boundaries of the PRKAR1A gene. IHC staining showed that all 7 CNC cases lacked PRKAR1A antigenicity and that 33 (32%) isolated cardiac myxomas were similarly nonreactive. Of tumors subjected to sequencing analysis, 2 (67%) CNC myxomas and 9 (31%) non-CNC myxomas had pathogenic PRKAR1A mutations. No germline mutations were found in 4 non-CNC cases tested. PRKAR1A appears to play a role in the development of both syndromic and nonsyndromic cardiac myxomas. Routine IHC evaluation of cardiac myxomas for PRKAR1A expression may be useful in excluding a diagnosis of CNC.

  6. Distribution of Bemisia tabaci (Hemiptera: Aleyrodidae) biotypes in North America after the Q invasion.

    Science.gov (United States)

    McKenzie, Cindy L; Bethke, James A; Byrne, Frank J; Chamberlin, Joseph R; Dennehy, Timothy J; Dickey, Aaron M; Gilrein, Dan; Hall, Paula M; Ludwig, Scott; Oetting, Ronald D; Osborne, Lance S; Schmale, Lin; Shatters, Robert G

    2012-06-01

    After the 2004 discovery of the Bemisia tabaci (Gennadius) (Hemiptera Aleyrodidae) Q biotype in the United States, there was a vital need to determine the geographical and host distribution as well as its interaction with the resident B biotype because of its innate ability to rapidly develop high-level insecticide resistance that persists in the absence of exposure. As part of a coordinated country-wide effort, an extensive survey of B. tabaci biotypes was conducted in North America, with the cooperation of growers, industry, local, state, and federal agencies, to monitor the introduction and distribution of the Q biotype. The biotype status of submitted B. tabaci samples was determined either by polymerase chain reaction amplification and sequencing of a mitochondrial cytochrome oxidase I small subunit gene fragment and characterization of two biotype discriminating nuclear microsatellite markers or esterase zymogram analysis. Two hundred and eighty collections were sampled from the United States, Bermuda, Canada, and Mexico during January 2005 through December 2011. Host plants were split between ornamental plant and culinary herb (67%) and vegetable and field crop (33%) commodities. The New World biotype was detected on field-grown tomatoes (Solanum lycopersicum L.) in Mexico (two) and in commercial greenhouses in Texas (three) and represented 100% of these five collections. To our knowledge, the latter identification represents the first report of the New World biotype in the United States since its rapid displacement in the late 1980s after the introduction of biotype B. Seventy-one percent of all collections contained at least one biotype B individual, and 53% of all collections contained only biotype B whiteflies. Biotype Q was detected in 23 states in the United States, Canada (British Columbia and Ontario territories), Bermuda, and Mexico. Forty-five percent of all collections were found to contain biotype Q in samples from ornamentals, herbs and a single

  7. Differential content of glyphosate and its metabolites in Digitaria insularis biotypes

    Directory of Open Access Journals (Sweden)

    Leonardo Bianco de Carvalho

    2013-07-01

    Full Text Available Experiments were carried out in controlled conditions to analyze the role of metabolism of glyphosate in Digitaria insularis (sourgrass biotypes with differential response to the herbicide. Contents of glyphosate, aminomethylphosphonic acid (AMPA, glyoxylate, and sarcosine was detected in leaf tissues by using reversed-polarity capillarity electrophoresis. Glyphosate content in the A biotype increased from 19.7 up to 65.5 µg g fresh weight-1, whereas decreasing from 19.9 down to 5.0 µg g fresh weight-1 in the B biotype, from 48 up to 168 hours after treatment. At 168 hours after treatment, percentage of the sum of AMPA, glyoxylate, and sarcosine was > 56% in the B biotype, whereas a small percentage of metabolites (< 10% was found in the A biotype. Thus, the faster herbicide degradation in the B biotype is evidence that a differential metabolism of glyphosate can be conferring its lesser susceptibility to the herbicide.

  8. Characterization of dental anatomy and gingival biotype in Asian populations.

    Science.gov (United States)

    Lee, Stacey A; Kim, Alexis C; Prusa, Louis A; Kao, Richard T

    2013-01-01

    Gingival and dental characteristics are risk factors for periodontal problems. With short or fused roots, a decreased periodontium results in some attachment loss, compromising periodontal stability. Similarly, with an increased incidence of thin gingival biotype, inflammatory and traumatic insults may result in gingival recession. Anecdotally, Asian dentitions have been described as having short roots with "thin gingiva". This cross-sectional study will utilize clinical data and radiographic interpretation to ascertain whether this clinical impression is valid.

  9. Supracrestal gingival tissue: assessing relation with periodontal biotypes in a healthy periodontium.

    Science.gov (United States)

    Arora, Ritika; Narula, Satish C; Sharma, Rajinder K; Tewari, Shikha

    2013-01-01

    This cross-sectional study assessed the variability in supracrestal gingival tissue (SGT) dimensions in a healthy periodontium. SGT dimensions were evaluated for differences across various locations, tooth types, and periodontal biotypes. All measurements were made with a vernier caliper to the nearest 0.1 mm. A total of 1,932 sites in 366 teeth were statistically analyzed. Median overall SGT was recorded as 3.50 mm with a range from 1.80 to 6.20 mm. The thick-flat biotype exhibited greater median SGT than the thinscalloped biotype. When planning crown lengthening surgery, periodontal biotype may have a significant role in determining SGT dimensions.

  10. Species identification of Streptococcus bovis group isolates causing bacteremia: a comparison of two MALDI-TOF MS systems.

    Science.gov (United States)

    Agergaard, Charlotte N; Knudsen, Elisa; Dargis, Rimtas; Nielsen, Xiaohui C; Christensen, Jens J; Justesen, Ulrik S

    2017-02-20

    This study compared two MALDI-TOF MS systems (Biotyper and VITEK MS) on clinical Streptococcus bovis group isolates (n=66). The VITEK MS gave fewer misidentifications and a higher rate of correct identifications than the Biotyper. Only the identification of S. lutetiensis by the VITEK MS was reliable. Additional optimization of the available system databases is needed.

  11. Comparative Analysis of Population Genetic Structure in Bemisia tabaci (Gennadius) Biotypes B and Q Based on ISSR Marker

    Institute of Scientific and Technical Information of China (English)

    CHU Dong; WAN Fang-hao; XU Bao-yun; WU Qing-jun; ZHANG You-jun

    2008-01-01

    Bemisia tabaci (Gennadius) biotypes B and Q are two invasive biotypes in the species complex. The comparison of the population genetic structure of the two biotypes is of significance to show their invasive mechanism and to their control. The intersimple sequence repeats (ISSR) marker was used to analyze the 16 B-biotype populations and 4 Q-biotype populations worldwide with a Trialeurodes vaporariorum population in Shanxi Province, China, and a B. tabaci non-B/Q-biotype population in Zhejiang Province, China, was used as control populations. The analysis of genetic diversity showed that the diversity indexes of biotype Q including Nei's gene diversity index, Shannon informative index, and the percentage of polymorphic loci were higher than those of biotype B. The high genetic diversity of biotype Q might provide the genetic basis for the excellent ecological adaptation. Cluster analysis suggested that the ISSR could not be used in the phylogenetic analysis though it could easily distinguish the biotypes of B. tabaci. The difference of the population genetic structure between the biotype B and the biotype Q exists based on the ISSR marker. Meanwhile, the results suggested that the molecular marker has its limitation in the phylogenetic analysis among the biotypes of B. tabaci.

  12. Morpho-physiological characterization of glyphosate-resistant and -susceptible horseweed (Conyza canadensis) biotypes of US Midsouth

    Science.gov (United States)

    Growth chamber and greenhouse experiments were conducted to compare selected biological and physiological parameters of glyphosate-resistant (GR) and -susceptible (GS) horseweed biotypes from Mississippi with a broader goal of fitness characterization in these biotypes. Vegetative growth parameters ...

  13. A large cholera outbreak due to a new cholera toxin variant of the Vibrio cholerae O1 El Tor biotype in Orissa, Eastern India.

    Science.gov (United States)

    Kumar, P; Jain, M; Goel, A K; Bhadauria, S; Sharma, S K; Kamboj, D V; Singh, L; Ramamurthy, T; Nair, G B

    2009-02-01

    A total of 32 Vibrio cholerae isolates were collected during a recent large cholera outbreak in Eastern India. Biochemical and serological studies revealed that all of the isolates belonged to serogroup O1, biotype El Tor, serotype Ogawa. Two multiplex PCR assays confirmed the presence of various toxigenic and pathogenic genes - ace, ctxAB, hlyA, ompU, ompW, rfbO1, rtx, tcp, toxR and zot - in all of the isolates. Sequencing of the ctxB gene from the isolates revealed a novel mutation in the gene. Sequencing also confirmed the presence of altered cholera toxin B of the classical biotype in all of the El Tor isolates, suggesting infection of isolates by classical CTXPhi. The molecular diversity of V. cholerae isolates studied by enterobacterial repetitive intergenic consensus sequence PCR, BOX-PCR and randomly amplified polymorphic DNA analysis uniformly showed the clonal relationship among the outbreak V. cholerae O1 isolates. The results of this study suggest that cholera-causing V. cholerae strains are constantly evolving in epidemic areas, highlighting the potential of the emergence of more virulent strains.

  14. Clinical and virological characteristics of calves experimentally infected with a Brazilian isolate of bovine viral diarrhea virus type 1a

    Directory of Open Access Journals (Sweden)

    Luana Marchi Quadros

    Full Text Available ABSTRACT: To study the pathogenicity of the Brazilian bovine viral diarrhea virus (BVDV type 1a 241.10 isolate, four calves were intranasally inoculated with a viral suspension containing 107.2 TCID50 mL-1. One calf was left uninoculated and kept in contact with the other calves to investigate viral transmissibility. After inoculation, the animals were monitored daily for clinical signs of infection. The presence of the virus in the blood and nasal secretions was confirmed by virus isolation in cell culture. White blood cells were quantified prior to and every 3 days after infection, and the presence of antibodies was checked every 7 days, starting at day 0 until day 42 post-inoculation (pi. After infection, nasal and ocular serous secretions were observed between days 1 and 5 pi, along with a mild cough from days 2 to 4 pi; however, no severe clinical signs were present. Body temperature was slightly elevated between days 4 and 6 pi. The control calf did not develop any of the signs observed in the infected animals. Cell culture-mediated virus isolation confirmed viremia between days 4 and 8 pi and the presence of the virus in the nasal secretions between days 1 and 10 pi. All infected animals showed a decrease in white blood cell count. Antibodies could be detected from day 14 pi, and these levels remained high until day 35 pi. The control calf had no viremia, viral presence in nasal secretions, or positive serology, indicating the absence of viral transmission. Thus, isolate BVDV 1a 241.10 has low pathogenicity and transmissibility but retains immunosuppressive capacity.

  15. Is colonoscopy necessary in cases of infection by Streptococcus bovis biotype II?

    NARCIS (Netherlands)

    Corredoira, J.C.; Alonso, M.P.; Garcia-Pais, M.J.; Rabunal, R.; Garcia-Garrote, F.; Lopez-Roses, L.; Lancho, A.; Coira, A.; Pita, J.; Velasco, D.; Lopez-Alvarez, M.J.; Tjalsma, H.; Varela, J.

    2014-01-01

    The association of colorectal neoplasia (CRN) with Streptococcus bovis biotype I (SBI) infection is well recognized. However, this is not the case for Streptococcus bovis biotype II (SBII). We conducted this study in order to analyze the relationship between SBII and CRN. We analyzed all cases of ba

  16. Screening for detection of wild oat biotypes resistant to fenoxaprop-P-ethyl from Mexico

    Directory of Open Access Journals (Sweden)

    Fidel González-Torralva

    2012-03-01

    Full Text Available Avena is one of the world’s most important genera resistant to herbicides. Suspected resistant biotype and susceptible biotype of Avena fatua were tested by screening to confirm the resistance to fenoxaprop-P-ethyl from Mexico. Suspected-resistant population was collected in wheat fields after the herbicide failed to control wild oat and the susceptible one was collected from a field with no herbicide application. Petri dish experiments were performed using different fenoxaprop-P-ethyl concentrations (0, 1, 5, 10 and 40 mM. Experiments were arranged in a completely randomized design with ten replicates. Plumule length in both biotypes decreased as fenoxaprop-P-ethyl concentration increased. However, there was a different response between the R and S biotypes. The EC50 for the resistant biotype was 3.3 mM while for the susceptible biotype was 9.3 mM, showing that the resistant biotype tolerated herbicide concentration approximately three times higher than the susceptible biotype. The results confirm the presence of Avena fatua resistant to fenoxaprop-P-ethyl in Mexico.

  17. Interference of Selected Palmer Amaranth (Amaranthus palmeri Biotypes in Soybean (Glycine max

    Directory of Open Access Journals (Sweden)

    Aman Chandi

    2012-01-01

    Full Text Available Palmer amaranth (Amaranthus palmeri S. Wats. has become difficult to control in row crops due to selection for biotypes that are no longer controlled by acetolactate synthase inhibiting herbicides and/or glyphosate. Early season interference in soybean [Glycine max (L. Merr.] for 40 days after emergence by three glyphosate-resistant (GR and three glyphosate-susceptible (GS Palmer amaranth biotypes from Georgia and North Carolina was compared in the greenhouse. A field experiment over 2 years compared season-long interference of these biotypes in soybean. The six Palmer amaranth biotypes reduced soybean height similarly in the greenhouse but did not affect soybean height in the field. Reduction in soybean fresh weight and dry weight in the greenhouse; and soybean yield in the field varied by Palmer amaranth biotypes. Soybean yield was reduced 21% by Palmer amaranth at the established field density of 0.37 plant m−2. When Palmer amaranth biotypes were grouped by response to glyphosate, the GS group reduced fresh weight, dry weight, and yield of soybean more than the GR group. The results indicate a possible small competitive disadvantage associated with glyphosate resistance, but observed differences among biotypes might also be associated with characteristics within and among biotypes other than glyphosate resistance.

  18. Target site mutation and reduced translocation are present in a glyphosate-resistant Lolium multiflorum Lam. biotype from Spain.

    Science.gov (United States)

    González-Torralva, Fidel; Gil-Humanes, Javier; Barro, Francisco; Brants, Ivo; De Prado, Rafael

    2012-09-01

    The resistance mechanism of a glyphosate-resistant Lolium multiflorum Lam. biotype collected in Córdoba (Southern Spain) was examined. Resistance Factor values at three different growth stages ranged between 4.77 and 4.91. At 96 hours after treatment (HAT) the S biotype had accumulated seven times more shikimic acid than the R biotype. There were significant differences in translocation of (14)C-glyphosate between biotypes, i.e. at 96 HAT, the R biotype accumulated in the treated leaf more than 70% of the absorbed herbicide, in comparison with 59.21% of the S biotype; the R biotype translocated only 14.79% of the absorbed (14)C-glyphosate to roots, while in the S population this value was 24.79%. Visualization of (14)C-glyphosate by phosphor imaging showed a reduced distribution in the R biotype compared with the S. Glyphosate metabolism was not involved in the resistance mechanism due to both biotypes showing similar values of glyphosate at 96 HAT. Comparison of the EPSPS gene sequences between biotypes indicated that the R biotype has a proline 182 to serine amino acid substitution. In short, the resistance mechanism of the L. multiflorum Lam. biotype is due to an impaired translocation of the herbicide and an altered target site.

  19. Multilocus sequence typing of Cronobacter sakazakii and Cronobacter malonaticus reveals stable clonal structures with clinical significance which do not correlate with biotypes

    Directory of Open Access Journals (Sweden)

    Manning Georgina

    2009-10-01

    Full Text Available Abstract Background The Cronobacter genus (Enterobacter sakazakii has come to prominence due to its association with infant infections, and the ingestion of contaminated reconstituted infant formula. C. sakazakii and C. malonaticus are closely related, and are defined according their biotype. Due to the ubiquitous nature of the organism, and the high severity of infection for the immunocompromised, a multilocus sequence typing (MLST scheme has been developed for the fast and reliable identification and discrimination of C. sakazakii and C. malonaticus strains. It was applied to 60 strains of C. sakazakii and 16 strains of C. malonaticus, including the index strains used to define the biotypes. The strains were from clinical and non-clinical sources between 1951 and 2008 in USA, Canada, Europe, New Zealand and the Far East. Results This scheme uses 7 loci; atpD, fusA, glnS, gltB, gyrB, infB, and pps. There were 12 sequence types (ST identified in C. sakazakii, and 3 in C. malonaticus. A third (22/60 of C. sakazakii strains were in ST4, which had almost equal numbers of clinical and infant formula isolates from 1951 to 2008. ST8 may represent a particularly virulent grouping of C. sakazakii as 7/8 strains were clinical in origin which had been isolated between 1977 - 2006, from four countries. C. malonaticus divided into three STs. The previous Cronobacter biotyping scheme did not clearly correspond with STs nor with species. Conclusion In conclusion, MLST is a more robust means of identifying and discriminating between C. sakazakii and C. malonaticus than biotyping. The MLST database for these organisms is available online at http://pubmlst.org/cronobacter/.

  20. Glyphosate, paraquat and ACCase multiple herbicide resistance evolved in a Lolium rigidum biotype.

    Science.gov (United States)

    Yu, Qin; Cairns, Andrew; Powles, Stephen

    2007-01-01

    Glyphosate is the world's most widely used herbicide. A potential substitute for glyphosate in some use patterns is the herbicide paraquat. Following many years of successful use, neither glyphosate nor paraquat could control a biotype of the widespread annual ryegrass (Lolium rigidum), and here the world's first case of multiple resistance to glyphosate and paraquat is confirmed. Dose-response experiments established that the glyphosate rate causing 50% mortality (LD(50)) for the resistant (R) biotype is 14 times greater than for the susceptible (S) biotype. Similarly, the paraquat LD(50 )for the R biotype is 32 times greater than for the S biotype. Thus, based on the LD(50 )R/S ratio, this R biotype of L. rigidum is 14-fold resistant to glyphosate and 32-fold resistant to paraquat. This R biotype also has evolved resistance to the acetyl-coenzyme A carboxylase (ACCase) inhibiting herbicides. The mechanism of paraquat resistance in this biotype was determined as restricted paraquat translocation. Resistance to ACCase-inhibiting herbicides was determined as due to an insensitive ACCase. Two mechanisms endowing glyphosate resistance were established: firstly, a point mutation in the 5-enolpyruvylshikimate-3-phosphate synthase (EPSPS) gene, resulting in an amino acid substitution of proline to alanine at position 106; secondly, reduced glyphosate translocation was found in this R biotype, indicating a co-occurrence of two distinct glyphosate resistance mechanisms within the R population. In total, this R biotype displays at least four co-existing resistance mechanisms, endowing multiple resistance to glyphosate, paraquat and ACCase herbicides. This alarming case in the history of herbicide resistance evolution represents a serious challenge for the sustainable use of the precious agrochemical resources such as glyphosate and paraquat.

  1. Phospholipase, proteinase and haemolytic activities of Candida albicans isolated from oral cavities of patients with type 2 diabetes mellitus

    OpenAIRE

    Tsang, CSP; Chu, FCS; Leung, WK; Jin, LJ; Samaranayake, LP; Siu, SC

    2007-01-01

    The aim of this study was to biotype and characterize phospholipase, proteinase and haemolytic activities of oral Candida albicans isolates from 210 Chinese patients with type 2 diabetes mellitus (DM) and 210 age- and sex-matched healthy controls. Seventy-six and 50 C. albicans isolates were obtained from type 2 DM patients and controls, respectively, using the oral rinse technique. The isolates were characterized with a biotyping system based on enzyme profiles, carbohydrate assimilation pat...

  2. The first pathogenic Yersinia enterocolitica bioserotype 4/O:3 strain isolated from a hunted wild boar (Sus scrofa) in Poland.

    Science.gov (United States)

    Bancerz-Kisiel, A; Platt-Samoraj, A; Szczerba-Turek, A; Syczyło, K; Szweda, W

    2015-10-01

    The objective of this study was to identify the bioserotypes and virulence markers of Yersinia enterocolitica strains isolated from wild boars in Poland. Bacteriological examination of 302 rectal swabs from 151 wild boars resulted in the isolation of 40 Y. enterocolitica strains. The majority of the examined strains (n = 30), belonged to bioserotype 1A/NI. The presence of individual Y. enterocolitica strains belonging to bioserotypes 1B/NI (3), 1A/O:8 (2), 1A/O:27 (2), 2/NI (1), 2/O:9 (1) and 4/O:3 (1) was also demonstrated. Amplicons corresponding to ail and ystA genes were observed only in one Y. enterocolitica strain--bioserotype 4/O:3. The ail and ystB gene amplicons were noted in 11 Y. enterocolitica biotype 1A strains, although single amplicons of ystB gene were found in 28 of the tested samples. In four out of eight cases when two Y. enterocolitica strains were isolated from the same animal, the strains differed in biotype, serotype or virulence markers. The European population of wild boars continues to grow and spread to new areas, therefore, wild boars harbouring potentially pathogenic Y. enterocolitica 4/O:3 strains pose a challenge to public health.

  3. Yersinia enterocolitica Isolates from Wild Boars Hunted in Lower Saxony, Germany.

    Science.gov (United States)

    von Altrock, Alexandra; Seinige, Diana; Kehrenberg, Corinna

    2015-07-01

    Yersiniosis is strongly associated with the consumption of pork contaminated with enteropathogenic Yersinia enterocolitica, which is harbored by domestic pigs without showing clinical signs of disease. In contrast to data on Y. enterocolitica isolated from conventionally reared swine, investigations into the occurrence of Y. enterocolitica in wild boars in Germany are rare. The objectives of the study were to get knowledge about these bacteria and their occurrence in wild boars hunted in northern Germany by isolation of the bacteria from the tonsils, identification of the bioserotypes, determination of selected virulence factors, macrorestriction analysis, multilocus sequence typing (MLST), and testing of antimicrobial susceptibility. Altogether, tonsils from 17.1% of 111 tested wild boars were positive for Y. enterocolitica by culture methods. All but two isolates belonged to biotype (BT) 1A, with the majority of isolates bearing a ystB nucleotide sequence which was revealed to have 85% identity to internal regions of Y. enterocolitica heat-stable enterotoxin type B genes. The remaining Y. enterocolitica isolates were identified to be BT 1B and did not carry the virulence plasmid. However, two BT 1A isolates carried the ail gene. Macrorestriction analysis and results from MLST showed a high degree of genetic diversity of the isolates, although the region where the samples were taken was restricted to Lower Saxony, Germany, and wild boars were shot during one hunting season. In conclusion, most Y. enterocolitica isolates from wild boars investigated in this study belonged to biotype 1A. Enteropathogenic Y. enterocolitica bioserotypes 4/O:3 and 2/O:9, usually harbored by commercially raised pigs in Europe, could not be identified.

  4. Emergence of Tetracycline Resistant Vibrio cholerae O1 Biotype El Tor Serotype Ogawa with Classical ctxB Gene from a Cholera Outbreak in Odisha, Eastern India.

    Science.gov (United States)

    Jain, M; Kumar, P; Goel, A K

    2016-01-01

    In September 2010, a cholera outbreak was reported from Odisha, Eastern India. V. cholerae isolated from the clinical samples were biochemically and serologically confirmed as serogroup O1, biotype El Tor, and serotype Ogawa. Multiplex PCR screening revealed the presence of various genes, namely, ompW, ctxB, zot, rfbO1, tcp, ace, hlyA, ompU, rtx, and toxR, in all of the isolates. The isolates were resistant to co-trimoxazole, nalidixic acid, polymyxin B, spectinomycin, streptomycin, sulfamethoxazole, tetracycline, trimethoprim, and vibriostatic agent 2,4-diamino-6,7-diisopropylpteridine (O/129). Minimum inhibitory concentration of tetracycline decreased in the presence of carbonyl cyanide m-chlorophenylhydrazone (CCCP), suggesting the involvement of efflux pumps. PCR analysis confirmed the presence of class I integrons as well as SXT elements harbouring antibiotic resistance genes in all isolates. Sequencing revealed the presence of ctxB gene of classical biotype in all the isolates. The isolates harboured an RS1-CTX prophage array with El Tor type rstR and classical ctxB on the large chromosome. The study indicated that the V. cholerae El Tor variants are evolving in the area with better antibiotic resistance and virulence potential.

  5. Polymorphisms in salivary-gland transcripts of Russian wheat aphid biotypes 1 and 2

    Institute of Scientific and Technical Information of China (English)

    Feng Cui; C.Michael Smith; John Reese; Owain Edwards; Gerald Reeck

    2012-01-01

    The Russian wheat aphid (RWA),Diuraphis noxia (Mordvilko) (Homoptera:Aphididae),is a major pest of small grains.As with plant-feeding aphids in general,the interaction between RWA and host plants is governed,on the insect side,by proteins and enzymes in saliva.In this work,we examined sequence variations in transcripts encoding proteins and enzymes of RWA salivary glands.We conducted reverse transcription - polymerase chain reaction in RWA biotypes 1 and 2 using primers derived from pea aphid orthoiogs,and cloned regions of 17 putative salivary gland transcripts.For four of the transcripts,we observed no difference in sequences between the two biotypes.For the other 13 transcripts,for example,the transcripts encoding sucrase,trehalase and protein C002,large amount of variations,both within each biotype and between the two biotypes,were observed.Usually the two biotypes shared only one variant,which was typically the most common variant in both biotypes.Most of the transcripts had more non-synonymous than synonymous codon changes among their variants.Our results offer possible molecular markers for distinguishing the two biotypes and insights into their evolution.

  6. Isolation and survival of Yersinia enterocolitica in ice cream at different pH values, stored at -18°c

    OpenAIRE

    2000-01-01

    The presence of Yersinia enterocolitica was investigated in 203 samples of industrial (123) and non-industrial ice cream (80). Two Y. enterocolitica strains were isolated from non-industrial ice cream, which suggests the possibility of post-manufacturing contamination. One strain was typed as B:1A, O: 3,50,51; lis Xz, while the other one was biotyped as: B:1A but not serologically typed. Survival of Y. enterocolitica was investigated by inoculating nine samples of industrially manufactured ic...

  7. Changes in the Russian Wheat Aphid (Hemiptera: Aphididae) Biotype Complex in South Africa.

    Science.gov (United States)

    Jankielsohn, Astrid

    2016-04-01

    Russian wheat aphid Diuraphis noxia (Kurdjumov) has spread from its native area in central Asia to all the major wheat-producing countries in the world to become an international wheat pest. Because the Russian wheat aphid is a serious threat to the wheat industry in South Africa, it is important to investigate the key factors involved in the distribution of Russian wheat aphid biotypes and in the changes of the Russian wheat aphid biotype complex in South Africa. There are currently four known Russian wheat aphid biotypes occurring in South Africa. Russian wheat aphid samples were collected from 2011 to 2014 during the wheat-growing season in spring and summer and these samples were screened to determine the biotype status. RWASA1 occurred predominantly in the Western Cape, while RWASA2 and RWASA3 occurred predominantly in the Eastern Free State. Following the first record of RWASA4 in 2011, this biotype was restricted to the Eastern Free State. The surveys suggest that the Russian wheat aphid bioype complex was more diverse in the Eastern Free State than in the other wheat production areas. There was also a shift in Russian wheat aphid biotype composition over time. The Russian wheat aphid biotype complex is dynamic, influenced by environmental factors such as host plants, altitude, and climate, and it can change and diversify over time causing fluctuation in populations over sites and years. This dynamic nature of the Russian wheat aphid will continue to challenge the development of Russian wheat aphid-resistant wheat cultivars in South Africa, and the continued monitoring of the biotypic and genetic structure, to determine genetic relatedness and variation in different biotypes, of Russian wheat aphid populations is important for protecting wheat.

  8. Gardnerella vaginalis isolated from patients with bacterial vaginosis and from patients with healthy vaginal ecosystems.

    Science.gov (United States)

    Aroutcheva, A A; Simoes, J A; Behbakht, K; Faro, S

    2001-10-01

    The differences in the phenotype and genotype of Gardnerella vaginalis isolates from patients with bacterial vaginosis (BV) and from patients without BV are unknown. In our study, 43 isolates of G. vaginalis were examined for biotype (hippurate hydrolysis, lipase, and beta-galactosidase activity), sensitivity to metronidazole, and genotype. Of the 117 women visiting the gynecology clinic at Rush-Presbyterian-St. Luke's Medical Center who were included in the study, 27.4% were found to have BV. G. vaginalis was found in samples from 87.5% of women with BV, from 34.0% of women with intermediate BV, and from 26.4% of women with healthy vaginal ecosystems. Among patients with G. vaginalis, biotypes 7 and 8 were isolated from 32% and 20% of patients, respectively. Biotype 5 was predominantly associated with a healthy vaginal ecosystem (P=.0004). Biotypes 5 and 7 were the most resistant to metronidazole. No specific phenotype or genotype of G. vaginalis causes BV.

  9. Phage Library Screening for the Rapid Identification and In Vivo Testing of Candidate Genes for a DNA Vaccine against Mycoplasma mycoides subsp. mycoides Small Colony Biotype

    Science.gov (United States)

    March, John B.; Jepson, Catherine D.; Clark, Jason R.; Totsika, Makrina; Calcutt, Michael J.

    2006-01-01

    A new strategy for rapidly selecting and testing genetic vaccines has been developed, in which a whole genome library is cloned into a bacteriophage λ ZAP Express vector which contains both prokaryotic (Plac) and eukaryotic (PCMV) promoters upstream of the insertion site. The phage library is plated on Escherichia coli cells, immunoblotted, and probed with hyperimmune and/or convalescent-phase antiserum to rapidly identify vaccine candidates. These are then plaque purified and grown as liquid lysates, and whole bacteriophage particles are then used directly to immunize the host, following which PCMV-driven expression of the candidate vaccine gene occurs. In the example given here, a semirandom genome library of the bovine pathogen Mycoplasma mycoides subsp. mycoides small colony (SC) biotype was cloned into λ ZAP Express, and two strongly immunodominant clones, λ-A8 and λ-B1, were identified and subsequently tested for vaccine potential against M. mycoides subsp. mycoides SC biotype-induced mycoplasmemia. Sequencing and immunoblotting indicated that clone λ-A8 expressed an isopropyl-β-d-thiogalactopyranoside (IPTG)-inducible M. mycoides subsp. mycoides SC biotype protein with a 28-kDa apparent molecular mass, identified as a previously uncharacterized putative lipoprotein (MSC_0397). Clone λ-B1 contained several full-length genes from the M. mycoides subsp. mycoides SC biotype pyruvate dehydrogenase region, and two IPTG-independent polypeptides, of 29 kDa and 57 kDa, were identified on immunoblots. Following vaccination, significant anti-M. mycoides subsp. mycoides SC biotype responses were observed in mice vaccinated with clones λ-A8 and λ-B1. A significant stimulation index was observed following incubation of splenocytes from mice vaccinated with clone λ-A8 with whole live M. mycoides subsp. mycoides SC biotype cells, indicating cellular proliferation. After challenge, mice vaccinated with clone λ-A8 also exhibited a reduced level of mycoplasmemia

  10. Proteins of bovine viral diarrhea virus: characterization, biotype-specific differences, and immunological properties

    Energy Technology Data Exchange (ETDEWEB)

    Donis, R.O.

    1987-01-01

    Virus-specific polypeptides in bovine viral diarrhea-mucosal disease (BVD) virus-infected bovine cells were studied by radiolabeling. A total of 12 polypeptides with apparent Mr of 165, 135, 118, 80, 75, 62, 56-58, 48, 37, 32, 25 and 19 kilodaltons (k) were identified in infected cells. Five glycoproteins were detected in infected cells. Two abundant species had apparent Mr of 48 k and 56-58 k while the minor species had masses of 118, 75 and 65 k. When cells were radiolabeled with L-(/sup 35/S)-methionine in the presence of tunicamycin the 56-58 k migrated with apparent masses of 54 k and 48-50 K in PAGE. Endoglycosidase F digestion of virus-induced polypeptides caused a 4-6 K reduction in the apparent molecular mass of the 56-58 k yielding a 52 k digested product. Tunicamycin caused a drastic reduction in the yield of infectious virus indicating that the carbohydrate moieties serve a vital role in the infection cycle of BVD virus. The noncytopathic biotype BVD (NCB-BVD) virus isolates can be consistently differentiated from cytopathic biotype BVD (CB-BVD) isolates on the basis of unique polypeptide profiles they induce in the infected cell: the most abundant polypeptide in CB-BVD infected cells is the 80 kD polypeptide while NCB-BVD lack this polypeptide and induce a predominant 118 k polypeptide. A panel of 25 murine monoclonal antibodies (Mabs) against the two major glycoproteins of BVD virus was produced. Based on their viral polypeptide specificity and on their ability to neutralize viral infectivity the Mabs in the panel were divided into 3 classes: Class 1 Mabs reacted with the 56-58 k glycoprotein and neutralized the virus, Class 2 Mabs recognized the 56-58 k glycoprotein but were not neutralizing and Class 3 Mabs reacted with the 48 k glycoprotein and did not neutralize the virus. These results identify the 56-58 k as one of the envelope glycoproteins of BVD virus.

  11. Dominant inheritance of isolated hypermethioninemia is associated with a mutation in the human methionine adenosyltransferase 1A gene

    Energy Technology Data Exchange (ETDEWEB)

    Chamberlin, M.E.; Ubagai, Tsuneyuki; Chou, J.Yang [National Inst. of Child Health and Human Development, Bethesda, MD (United States)] [and others

    1997-03-01

    Methionine adenosyltransferase (MAT) I/III deficiency, characterized by isolated persistent hypermethioninemia, is caused by mutations in the MAT1A gene encoding MAT{alpha}1, the subunit of major hepatic enzymes MAT I ([{alpha}1]{sub 4}) and III ([{alpha}1]{sub 2}). We have characterized 10 MAT1A mutations in MAT I/III-deficient individuals and shown that the associated hypermethioninemic phenotype was inherited as an autosomal recessive trait. However, dominant inheritance of hypermethioninemia, also hypothesized to be caused by MAT MU deficiency, has been reported in two families. Here we show that the only mutation uncovered in one of these families, G, is a G{r_arrow}A transition at nt 791 in exon VII of one MAT1A allele that converts an arginine at position 264 to a histidine (R264H). This single allelic R264H mutation was subsequently identified in two hypermethioninemic individuals in an additional family, C. Family C members were also found to inherit hypermethioninemia in a dominant fashion, and the available affected members analyzed carried the single allelic R264H mutation. Substitution of R-264 with histidine (R264H, the naturally occurring mutant), leucine (R264L), aspartic acid (R264D), or glutamic acid (R264E) greatly reduced MAT activity and severely impaired the ability of the MAT{alpha}1 subunits to form homodimers essential for optimal catalytic activity. On the other hand, when lysine was substituted for R-264 (R264K), the mutant {alpha}1 subunit was able to form dimers that retain significant MAT activity, suggesting that amino acid 264 is involved in intersubunit salt-bridge formation. Cotransfection studies show that R264/R264H MAT{alpha}1 heterodimers are enzymatically inactive, thus providing an explanation for the R264H-mediated dominant inheritance of hypermethioninernia. 23 refs., 4 figs., 2 tabs.

  12. T-cell responses associated with neonatal alloimmune thrombocytopenia: isolation of HPA-1a-specific, HLA-DRB3*0101-restricted CD4+ T cells.

    Science.gov (United States)

    Ahlen, Maria Therese; Husebekk, Anne; Killie, Mette Kjaer; Skogen, Bjørn; Stuge, Tor B

    2009-04-16

    T-cell responses have been implicated in the development of HPA-1a-induced neonatal alloimmune thrombocytopenia (NAIT). However, HPA-1a-specific T cells have neither been isolated nor characterized. Here, we aimed to determine whether HPA-1a-specific T cells could be isolated from HPA-1a-immunized women. In the present study, peripheral blood mononuclear cells (PBMCs) from an HPA-1a-alloimmunized woman were cultured for weeks in the presence of HPA-1a peptide, labeled with CFSE, and assayed for antigen-specific proliferation. Individual proliferating cells were isolated by fluorescence-activated cell sorting and expanded in culture. Antigen specificity and HLA restriction were determined by cytokine secretion (enzyme-linked immunospot [ELISPOT]) and proliferation assays. Several CD3(+)CD4(+) T-cell clones were isolated that proliferated and secreted cytokines in response to HPA-1a peptide. Two of these clones have been established in long-term culture in our laboratory. Both of these recognize synthetic as well as naturally processed HPA-1a antigen, and the recognition is restricted by the MHC molecule HLA-DRB3*0101 that is strongly associated with NAIT. These HPA-1a-specific T-cell clones represent unambiguous evidence for the association of T-cell responses with NAIT, and they will serve as unique tools to elucidate the cellular immune response that may result in NAIT.

  13. The optimization and validation of the Biotyper MALDI-TOF MS database for the identification of Gram-positive anaerobic cocci

    DEFF Research Database (Denmark)

    Veloo, A C M; de Vries, E D; Jean-Pierre, H;

    2016-01-01

    Gram-positive anaerobic cocci (GPAC) account for 24%-31% of the anaerobic bacteria isolated from human clinical specimens. At present, GPAC are under-represented in the Biotyper MALDI-TOF MS database. Profiles of new species have yet to be added. We present the optimization of the matrix-assisted......Gram-positive anaerobic cocci (GPAC) account for 24%-31% of the anaerobic bacteria isolated from human clinical specimens. At present, GPAC are under-represented in the Biotyper MALDI-TOF MS database. Profiles of new species have yet to be added. We present the optimization of the matrix......-assisted laser desorption-ionization time-of-flight mass spectrometry (MALDI-TOF MS) database for the identification of GPAC. Main spectral profiles (MSPs) were created for 108 clinical GPAC isolates. Identity was confirmed using 16S rRNA gene sequencing. Species identification was considered to be reliable...... if the sequence similarity with its closest relative was ≥98.7%. The optimized database was validated using 140 clinical isolates. The 16S rRNA sequencing identity was compared with the MALDI-TOF MS result. MSPs were added from 17 species that were not yet represented in the MALDI-TOF MS database or were under...

  14. Complete sequence of three different biotypes of tomato spotted wilt virus (wild type, tomato Sw-5 resistance-breaking and pepper Tsw resistance-breaking) from Spain.

    Science.gov (United States)

    Debreczeni, Diana E; López, Carmelo; Aramburu, José; Darós, José Antonio; Soler, Salvador; Galipienso, Luis; Falk, Bryce W; Rubio, Luis

    2015-08-01

    Tomato spotted wilt virus (TSWV) occurs worldwide and causes production losses in many important horticultural crops such as tomato and pepper. Breeding resistant cultivars has been the most successful method so far for TSWV disease control, but only two genes have been found to confer resistance against a wide spectrum of TSWV isolates: Sw-5 in tomato and Tsw in pepper. However, TSWV resistance-breaking isolates have emerged in different countries a few years after using resistant cultivars. In this paper, we report the first complete nucleotide sequences of three Spanish TSWV isolates with different biotypes according to their abilities to overcome resistance: LL-N.05 (wild type, WT), Pujol1TL3 (Sw-5 resistance breaking, SBR) and PVR (Tsw resistance-breaking, TBR). The genome of these TSWV isolates consisted of three segments: L (8913-8914 nt), M (4752-4825 nt) and (S 2924-2961 nt). Variations in nucleotide sequences and genomic RNA lengths among the different virus biotypes are reported here. Phylogenetic analysis of the five TSWV open reading frames showed evidence of reassortment between genomic segments of LL-N.05 and Pujol1TL3, which was supported by analysis with different recombination-detecting algorithms.

  15. Comparison of outer membrane protein and biochemical profiles of Haemophilus aegyptius and Haemophilus influenzae biotype III.

    OpenAIRE

    Carlone, G M; Sottnek, F O; Plikaytis, B. D.

    1985-01-01

    Haemophilus aegyptius and Haemophilus influenzae biotype III are morphologically and biochemically similar; however, their outer membrane protein (Sarkosyl insoluble) profiles are distinct. Of 18 strains of H. aegyptius examined, 15 had a type 1 protein profile, and 3 had a type 2 profile, whereas the 5 strains of H. influenzae biotype III examined had three other protein profile types. All Haemophilus strains examined had 31- and 76-kilodalton (kDa) proteins and minor proteins with molecular...

  16. Clinical Considerations on the Root Coverage of Gingival Recessions in Thin or Thick Biotype.

    Science.gov (United States)

    Kahn, Sergio; Almeida, Renato Alves da Rocha; Dias, Alexandra Tavares; Rodrigues, Walmir Júnior; Barceleiro, Marcos Oliveira; Taba, Mario

    2016-01-01

    Gingival biotype is a clinical term used to describe the thickness of the gingiva. It has been classified as being thick or thin and may be related to the clinical outcome of root coverage procedures. This study evaluated the impact of gingival biotype on the clinical outcome of root coverage procedures following subepithelial connective tissue graft plus coronally positioned flap. A total of 19 patients, 10 with thin and 9 with thick gingival biotype, were treated for localized Miller Class I or II gingival recessions. After 6 months, 14 patients achieved complete root coverage, 7 from each group. The overall mean pooled root coverage rate was 90.93%. The thin biotype cases yielded a reduced mean root coverage of 88.51% compared with 93.63% for patients who had the thick biotype classification. Although the thin gingival biotype may impair the clinical outcome of root coverage procedures, this limitation does not appear to have a strong influence on the success of the root coverage therapy when subepithelial connective tissue graft was associated with the coronal positioning of the flap.

  17. Characterization of a Novel Mesophilic Bacterial Amylase Secreted by ZW2531-1,a Strain Newly Isolated from Soil

    Institute of Scientific and Technical Information of China (English)

    WANG Yang; LI Fan; GAO Chao-hui; ZHANG Ying-Jiu

    2009-01-01

    A novel mesophilic bacterial amylase,named oligosaccharide-producing multifunctional amylase(OPMA),was discovered and characterized.OPMA is an extracellular enzyme secreted by ZW2531-1,a strain newly isolated from Chinese soil.It could be purified to homogeneity from the culture supematant of ZW2531-1 by 30%-60% saturated ammonium sulfate precipitation,followed by twice Sephadex gel filtration chromatography.OPMA is a 66 kDa protein based on SDS-PAGE and has an isoelectric point(p/) at pH=5.3 by Isoelectric focusing electrophoresis(IFE),it only catalyzes the degradation of starch,rather than other alpha-1,4-and/or 1,6-glucan polysaccharides such as β-cyclomaltodextrin and pullulan.OPMA degraded starch to produce several oligosccharides including maltose,maltotriose,and isomaltotriose as the major end-products,and perhaps other oligosaccharides such as isomaltotetraose,rather than glucose.OPMA exhibited optimal catalytic activity at a reaction temperature of 50 ℃ and pH=6.0,as determined by orthogonal test.Under the optimal reaction conditions,purified OPMA had a specific activity of 13.75 U/mg.These findings suggest that OPMA could be used for the production of some oligosaccharides beneficial to the food industry and medicine.

  18. Leisingera sp. JC1, a Bacterial Isolate from Hawaiian Bobtail Squid Eggs, Produces Indigoidine and Differentially Inhibits Vibrios.

    Science.gov (United States)

    Gromek, Samantha M; Suria, Andrea M; Fullmer, Matthew S; Garcia, Jillian L; Gogarten, Johann Peter; Nyholm, Spencer V; Balunas, Marcy J

    2016-01-01

    Female members of many cephalopod species house a bacterial consortium in the accessory nidamental gland (ANG), part of the reproductive system. These bacteria are deposited into eggs that are then laid in the environment where they must develop unprotected from predation, pathogens, and fouling. In this study, we characterized the genome and secondary metabolite production of Leisingera sp. JC1, a member of the roseobacter clade (Rhodobacteraceae) of Alphaproteobacteria isolated from the jelly coat of eggs from the Hawaiian bobtail squid, Euprymna scolopes. Whole genome sequencing and MLSA analysis revealed that Leisingera sp. JC1 falls within a group of roseobacters associated with squid ANGs. Genome and biochemical analyses revealed the potential for and production of a number of secondary metabolites, including siderophores and acyl-homoserine lactones involved with quorum sensing. The complete biosynthetic gene cluster for the pigment indigoidine was detected in the genome and mass spectrometry confirmed the production of this compound. Furthermore, we investigated the production of indigoidine under co-culture conditions with Vibrio fischeri, the light organ symbiont of E. scolopes, and with other vibrios. Finally, both Leisingera sp. JC1 and secondary metabolite extracts of this strain had differential antimicrobial activity against a number of marine vibrios, suggesting that Leisingera sp. JC1 may play a role in host defense against other marine bacteria either in the eggs and/or ANG. These data also suggest that indigoidine may be partially, but not wholly, responsible for the antimicrobial activity of this squid-associated bacterium.

  19. Vaccine Induced Specific Protection Against Enteric Red Mouth Disease (ERM) Caused by Yersinia Ruckeri Serotype 1 Biotype 2

    DEFF Research Database (Denmark)

    Deshmukh, Sidharta; Raida, Martin K.; Dalsgaard, Inger;

    2011-01-01

    In European fish farms there is evidence of enteric red mouth disease (ERM) outbreaks in previously vaccinated farmed fish. It has been suggested that the occurrence of a Yersinia ruckeri variant (biotype 2) may explain this situation. Recent development of commercial vaccines has included both......) developed against ERM was investigated following intraperitoneal (IP) challenge with Yersinia ruckeri serotype1 biotype 2. Fish were immersion vaccinated for 30 s and challenged 2, 4 and 6 months post vaccination. The onset and severity of various pathological lesions along with their disappearance during...... biotype 1 and 2. In this study, the specificity of immune protection extended by three commercial vaccines viz; AQUAVAC ERM® Intervet Schering Plough (based on biotype 1 only), ERMOGEN VET® Novartis (based on biotype 1 only) and AQUAVAC RELERA® Intervet Schering Plough (based on both biotype 1and 2...

  20. Two non-target mechanisms are involved in glyphosate-resistant horseweed (Conyza canadensis L. Cronq.) biotypes.

    Science.gov (United States)

    González-Torralva, Fidel; Rojano-Delgado, Antonia M; Luque de Castro, María D; Mülleder, Norbert; De Prado, Rafael

    2012-11-15

    The physiological and biochemical bases for glyphosate resistance and susceptibility in horseweed (Conyza canadensis L. Cronq.) populations collected from Córdoba, Huelva, Málaga, Jaén and Seville in southern Spain were investigated. Screening 25 populations treated with glyphosate (238gacidequivalentha(-1)) at the rosette stage (BBCH 14-15) revealed reductions in fresh weight (fw) of 9-99%. The resistant biotype (R C004) was 6.1 times more resistant than the susceptible biotype (S). Shikimate accumulation in both biotypes increased until 72h after treatment (HAT), and then continued to increase (to 61.2%) in the S biotype, but decreased by 40% in the R (C004) biotype. Differential glyphosate spray retention and foliar uptake of applied (14)C-glyphosate between the R (C004) and S biotype had no effect on resistance to this herbicide. Quantitative and qualitative tests showed greater (14)C-glyphosate mobility in the S biotype than in the R (C004) biotype. Glyphosate was metabolized faster in the R (C004) biotype than in the S biotype. The herbicide disappeared completely from the R (C004) biotype by conversion into glyoxylate, sarcosine and aminomethylphosphonic acid within 96 HAT. On the other hand, 41.43nmolg(-1)fw of all glyphosate applied remained in the S biotype and glyoxylate was its only non-toxic metabolite. These results suggest that glyphosate resistance in horseweed is due to two different non-target mechanisms, namely: (a) impaired glyphosate translocation and (b) glyphosate metabolism to other compounds.

  1. Dynamics of Bemisia tabaci biotypes and insecticide resistance in Fujian province in China during 2005–2014

    Science.gov (United States)

    Yao, Feng-Luan; Zheng, Yu; Huang, Xiao-Yan; Ding, Xue-Ling; Zhao, Jian-Wei; Desneux, Nicolas; He, Yu-Xian; Weng, Qi-Yong

    2017-01-01

    The whitefly Bemisia tabaci (Gennadius) is an important agricultural insect pest worldwide. The B and Q biotypes are the two most predominant and devastating biotypes prevalent across China. However, there are few studies regarding the occurrence of the Q biotype in Fujian Province, China, where high insecticide resistance has been reported in the B biotype. Differences in some biological characteristics between the B and Q biotypes, especially insecticide resistance, are considered to affect the outcome of their competition. Extensive surveys in Fujian revealed that the B biotype was predominant during 2005–2014, whereas the Q biotype was first detected in some locations in 2013 and widely detected throughout the province in 2014. Resistance to neonicotinoids (that have been used for more than 10 years) exhibited fluctuations in open fields, but showed a continual increasing trend in protected areas. Resistance to lambda-cyhalothrin, chlorpyrifos, and abamectin exhibited a declining trend. Resistance to novel insecticides, such as nitenpyram, pymetrozine, sulfoxaflor, and cyantraniliprole, in 2014 was generally below a moderate level. A decline in insecticide resistance in the B biotype and the rapid buildup of protected crops under global temperature increase may have promoted the establishment of the Q biotype in Fujian. PMID:28112233

  2. Effects of host, temperature and relative humidity on competitive displacement of two invasive Bemisia tabaci biotypes [Q and B

    Institute of Scientific and Technical Information of China (English)

    Dong Chu; Yun-Li Tao; You-Jun Zhang; Fang-Hao Wan; Judith K Brown

    2012-01-01

    Bemisia tabaci shifted unexpectedly in China from a predominance of B biotype to Q biotype during 2005-2008.This observation stimulated an interest in investigating whether environmental factors,including host,temperature and relative humidity (RH) could possibly explain the observed shift in biotypes distribution.Results indicated that all three parameters examined influenced biotype survivability.The percentage of B biotype,when reared together on pepper plants with the Q biotype,decreased significantly from 66.7% in the founder population,to 13.6% and 3.7% in the first and second generations,respectively.When the B (founder at 66.7%) and Q (founder at 33.3%) biotypes were reared together on eggplant alone,or on pepper-plus-eggplant combination,the population size of the B biotype either remained constant,or increased somewhat in the first and second generations.On eggplant,the effects of RH and temperature on the competitiveness between the Q and B biotypes (3 pairs of Q and 6 pairs of B) were not significant.

  3. Isolation and characterisation of P-EPTX-Ap1a and P-EPTX-Ar1a: pre-synaptic neurotoxins from the venom of the northern (Acanthophis praelongus) and Irian Jayan (Acanthophis rugosus) death adders.

    Science.gov (United States)

    Chaisakul, Janeyuth; Konstantakopoulos, Nicki; Smith, A Ian; Hodgson, Wayne C

    2010-09-15

    The neurotoxicity observed following death adder envenoming has been thought to be solely due to the presence of potent post-synaptic neurotoxins. Clinically, these effects are often poorly reversed by death adder antivenom or anticholinesterase, particularly when patients present with established paralysis. This suggests that either the post-synaptic neurotoxins are irreversible/'pseudo' irreversible, or the venom contains pre-synaptic neurotoxins that do not respond to antivenom. To support the later hypothesis, a pre-synaptic neurotoxin (P-EPTX-Aa1a) has recently been isolated from the venom of Acanthophis antarcticus. We examined Acanthophis praelongus and Acanthophis rugosus venoms for the presence of pre-synaptic neurotoxins. P-EPTX-Ap1a (40,719Da) and P-EPTX-Ar1a (40,879Da) were isolated from A. praelongus and A. rugosus venoms, respectively. P-EPTX-Ap1a and P-EPTX-Ar1a are comprised of three different subunits, alpha, beta1 and beta2. The two toxins displayed similar levels of PLA(2) activity which was almost solely attributed to the alpha subunit in both toxins. P-EPTX-Ap1a (20-100nM) and P-EPTX-Ar1a (20-100nM) caused inhibition of indirect twitches of the skeletal muscle preparation without affecting contractile responses to nicotinic receptor agonists. Interestingly, only the alpha subunit of both toxins (300nM) displayed neurotoxic activity. Inhibition of PLA(2) activity markedly reduced the effect of the toxins on muscle twitch height. These results confirm that P-EPTX-Ap1a and P-EPTX-Ar1a are pre-synaptic neurotoxins and represent the second and third such toxins to be isolated from death adder venom. The presence of pre-synaptic neurotoxins in Acanthophis sp. venoms indicates that treatment strategies for envenoming by these snakes needs to be reassessed given the likelihood of irreversible neurotoxicity.

  4. Rickettsia influences thermotolerance in the whitefly Bemisia tabaci B biotype

    Institute of Scientific and Technical Information of China (English)

    Marina Brumin; Svetlana Kontsedalov; Murad Ghanim

    2011-01-01

    The whitefly Bemisia tabaci harbors Portiera aleyrodidarum,an obligatory symbiotic bacterium,as well as several secondary symbionts,including Rickettsia,Hamiltonella,Wolbachia,Arsenophonus,Cardinium and Fritschea,the function of which is unknown.In Israel,Rickettsia is found in both the B and Q of B.tabaci biotypes,and while all other secondary symbionts are located in the bacteriomes,Rickettsia can occupy most of the body cavity of the insect.We tested whether Rickettsia influences the biology of B.tabaci and found that exposing a Rickettsia-containing population to increasing temperatures significantly increases its tolerance to heat shock that reached 40℃,compared to a Rickettsia-free population.This increase in tolerance to heat shock was not associated with specific induction of heat-shock protein gene expression; however,it was associated with eduction in Rickettsia numbers as was assessed by quantitative real-time polymerase chain reaction and fluorescence in situ hybridization analyses.To assess the causes for thermotolerance when ickettsia is reduced,we tested whether its presence is associated with the induction of genes required for thermotolerance.We found that under normal 25℃ rearing temperature,genes associated with response to stress such as cytoskeleton genes are induced in the Rickettsia-containing population.Thus,the presence of Rickettsia in B.tabaci under normal conditions induces the expression of genes required for thermotolerance that under high temperatures indirectly lead to this tolerance.

  5. Bionomics of brown planthopper biotype 2 from field and greenhouse

    Institute of Scientific and Technical Information of China (English)

    2001-01-01

    Two biotype 2 populations of brown planthopper (BPH), Nilaparvata lugens stal, were used in this experiment. One was purified by determining the weight of honeydew excreted on susceptible rice variety TN1 and resistant rice varieties Mudgo (bearing resistant gene Bph1) and ASD7 (bearing resistant gene bph2) by female adult in paddy field in Guangxi Province, south China, and the other was obtained from greenhouse and continuously reared on rice resistant variety Mudgo in IRRI, Philippines. One newly hatched nymph was introduced into the test tube containing two 60 day old rice plants and cultured at 26± 1℃ , L∶ D =12 h∶ 12 h. Sixty replications were set up for each tested rice variety. The number and instar of nymphes were recorded every day. The body weight and honeydew excreted by female adult emerged within 24 h and 72 h, the number of eggs laid, and newly hatched nymph on different resistant rice varieties were measured. The hatchability, net reproductive rate, female adult nutritional indices such as relative growth rate (RGR)and efficiency of conversion of ingested food (ECI) were calculated.

  6. [Endocrine obesity: bioelectric profiles (biotypes) detected in the body composition].

    Science.gov (United States)

    Miggiano, G A D; Petitti, T

    2004-09-01

    136 patients were selected (16 men and 120 women with non-specific menstrual disturbances) with a BMI (Body Mass Index) between 25 and 45 kg/m2, which were diagnosed with "disendocrinia" (GH deficit, hyperadrenocorticism, hypothyroidsm, hyperandrogenism, menstrual cycle disorders). The proposed approach, based on the visualization of the value distribution of the electric measures in different graphics, is able to immediately explain the bioelectric state of the individual's lean-mass. Subjects with hypothyroidism present, along with their overweight, less bio-conducting mass, with an altered fluid intra/extra-cellular distribution. Patients with hyperadrenocorticism show instead an hyperhydratation of the body mass, especially in the extracellular level. Patients with menstrual disorders (amenorrea, polycystic ovary syndrome, anovulatory cycle etc...) present a lean mass reduction (elevated Rs) and an increase of the intra-cellular compartment (elevated-Xc). Patients with hyper-androgenism (and hirsutism) show a characteristic bioelectric "pattern", with low Rs levels and high Xc levels. Subjects with GH deficit (men and women), has a trend of documenting bioelectric measures with lower lean mass and higher fat-mass. Different electric biotypes seem to characterize the body composition in the several endocrine disorders.

  7. Comparison by restriction fragment pattern analyses and molecular characterization of some European isolates of Suid herpesvirus 1: A contribution to strain differentiation of European isolates

    DEFF Research Database (Denmark)

    Christensen, Laurids Siig

    1988-01-01

    Eleven European isolates of Suid herpesvirus type 1 (SHV-1) were compared by restriction fragment pattern analyses and Southern blot hybridization using different genomic probes. The presence of strain discriminative 4 major genome types and several subtypes as well as the molecular distinctions ...

  8. Suitability changes with host leaf age for Bemisia tabaci B biotype and Trialeurodes vaporariorum.

    Science.gov (United States)

    Zhang, Gui-Fen; Wan, Fang-Hao

    2012-10-01

    The suitability of tomato leaves of different ages for Bemisia tabaci (Gennadius) B biotype and Trialeurodes vaporariorum (Westwood) was characterized by development time, stage-specific survival, sex ratio, longevity, and fecundity. Three categories of leaf ages were tested (young: expanding leaves <2 wk old; mature: fully expanded, 4-5-wk-old leaves; old: fully expanded, 6-7-wk-old leaves). There was no significant variation in the duration of development of the two species among the three classes of leaf ages, but total survival and ratio of females to males on mature and old leaves were higher than on young leaves. For egg hatch, the reverse tendency was found. Longevity of both species was higher on mature than on young leaves, and fecundity during the first 2 wk of adult life was higher on mature than on young or old leaves. The B. tabaci B biotype developed faster through the quiescent fourth nymphal instar, had higher ratio of females to males, survived longer, and produced more eggs (in the first 2 wk of adult life) than T. vaporariorum on leaves of the same age; although on young leaves, B. tabaci B biotype survivorship was lower than that of T. vaporariorum. The index of host suitability of B. tabaci B biotype was higher on mature and old leaves than on young leaves. In T. vaporariorum, no such differences were found among these three leaf ages. The results could provide some cues why B. tabaci B biotype is spreading so vigorously.

  9. Comparative Morphology and Morphometry of Six Biotypes of Bemisia tabaci (Hemiptera:Aleyrodidae) from China

    Institute of Scientific and Technical Information of China (English)

    LI Jing-jing; TANG Qing-bo; BAI Run-e; LI Xiao-min; JIANG Jin-wei; ZHAI Qing; YAN Feng-ming

    2013-01-01

    Morphology and morphometry of six biotypes (B, Q, Cv, ZHJ-1, ZHJ-2 and ZHJ-3) of Bemisia tabaci (Gennadius) from China on cotton plants were studied by using microscopes. Nymphal body sizes and characters were measured and observed, especially on the 4th instar (pupal case), including the vasiform orifice, operculum, lingula, length and thickness of anterior and posterior wax margins, width of thoracic tracheal combs. Adult characters of both sexes were investigated including the body size, compound eyes, antennal segments, vasiform orifice, hind tarsi and genitals. The results indicated that differences of some morphological characters or morphometrics were significant among the six biotypes of B. tabaci in China:(1) Pupal sizes of the exotic biotypes (B and Q) were significantly larger than the indigenous biotypes with the following order as B>Q>ZHJ-1>Cv>ZHJ-3>ZHJ-2;(2) for both male and female adults, sizes of all characters investigated in the invading biotypes (B and Q), especially B, were much larger than those of the indigenous ones.

  10. Inheritance of Evolved Glyphosate Resistance in a North Carolina Palmer Amaranth (Amaranthus palmeri Biotype

    Directory of Open Access Journals (Sweden)

    Aman Chandi

    2012-01-01

    Full Text Available Inheritance of glyphosate resistance in a Palmer amaranth biotype from North Carolina was studied. Glyphosate rates for 50% survival of glyphosate-resistant (GR and glyphosate-susceptible (GS biotypes were 1288 and 58 g ha−1, respectively. These values for F1 progenies obtained from reciprocal crosses (GR×GS and GS×GR were 794 and 501 g ha−1, respectively. Dose response of F1 progenies indicated that resistance was not fully dominant over susceptibility. Lack of significant differences between dose responses for reciprocal F1 families suggested that genetic control of glyphosate resistance was governed by nuclear genome. Analysis of F1 backcross (BC1F1 families showed that 10 and 8 BC1F1 families out of 15 fitted monogenic inheritance at 2000 and 3000 g ha−1 glyphosate, respectively. These results indicate that inheritance of glyphosate resistance in this biotype is incompletely dominant, nuclear inherited, and might not be consistent with a single gene mechanism of inheritance. Relative 5-enolpyruvylshikimate-3-phosphate synthase (EPSPS copy number varied from 22 to 63 across 10 individuals from resistant biotype. This suggested that variable EPSPS copy number in the parents might be influential in determining if inheritance of glyphosate resistance is monogenic or polygenic in this biotype.

  11. Rats fed soy protein isolate (SPI) have impaired hepatic CYP1A1 induction by polycyclic aromatic hydrocarbons as a result of interference with aryl hydrocarbon receptor signaling

    Science.gov (United States)

    Consumption of soy diet has been found to reduce cancer incidence in animals and is associated with reduced cancer risk in humans. Previously, we have demonstrated that female Sprague-Dawley rats fed purified AIN-93G diets with soy protein isolate (SPI) as the sole protein source had reduced CYP1A1 ...

  12. Draft Genome Sequence of Pantoea ananatis GB1, a Plant-Growth-Promoting Hydrocarbonoclastic Root Endophyte, Isolated at a Diesel Fuel Phytoremediation Site Planted with Populus.

    Science.gov (United States)

    Gkorezis, Panagiotis; Van Hamme, Jonathan D; Bottos, Eric M; Thijs, Sofie; Balseiro-Romero, Maria; Monterroso, Carmela; Kidd, Petra Suzan; Rineau, Francois; Weyens, Nele; Vangronsveld, Jaco

    2016-02-25

    We report the 4.76-Mb draft genome of Pantoea ananatis GB1, a Gram-negative bacterium of the family Enterobacteriaceae, isolated from the roots of poplars planted for phytoremediation of a diesel-contaminated plume at the Ford Motor Company site in Genk, Belgium. Strain GB1 promotes plant growth in various hosts and metabolizes hydrocarbons.

  13. Draft Genome Sequence of Bacillus sp. Strain NSP2.1, a Nonhalophilic Bacterium Isolated from the Salt Marsh of the Great Rann of Kutch, India

    Science.gov (United States)

    Pal, Kamal Krishna; Sherathia, Dharmesh; Dalsania, Trupti; Savsani, Kinjal; Patel, Ilaxi; Sukhadiya, Bhoomika; Mandaliya, Mona; Thomas, Manesh; Ghorai, Sucheta; Vanpariya, Sejal; Rupapara, Rupal; Rawal, Priya; Saxena, Anil Kumar

    2013-01-01

    The 5.52-Mbp draft genome sequence of Bacillus sp. strain NSP2.1, a nonhalophilic bacterium isolated from the salt marsh of the Great Rann of Kutch, India, is reported here. An analysis of the genome of this organism will facilitate the understanding of its survival in the salt marsh. PMID:24158559

  14. Draft Genome Sequence of Bacillus sp. Strain NSP9.1, a Moderately Halophilic Bacterium Isolated from the Salt Marsh of the Great Rann of Kutch, India

    Science.gov (United States)

    Pal, Kamal Krishna; Sherathia, Dharmesh; Dalsania, Trupti; Savsani, Kinjal; Patel, Ilaxi; Thomas, Manesh; Ghorai, Sucheta; Vanpariya, Sejal; Rupapara, Rupal; Rawal, Priya; Sukhadiya, Bhoomika; Mandaliya, Mona; Saxena, Anil Kumar

    2013-01-01

    We report the 4.52-Mbp draft genome sequence of Bacillus sp. strain NSP9.1, a moderately halophilic bacterium isolated from the salt marsh of the Great Rann of Kutch, India. Analysis of the genome of this organism will lead to a better understanding of the genes and metabolic pathways involved in imparting osmotolerance. PMID:24115550

  15. Physiology of Glyphosate-Resistant and Glyphosate-Susceptible Palmer Amaranth (Amaranthus palmeri Biotypes Collected from North Carolina

    Directory of Open Access Journals (Sweden)

    Jared R. Whitaker

    2013-01-01

    Full Text Available Glyphosate-resistant (GR biotypes of Palmer amaranth are now commonly found across the southern United States. Experiments were conducted to characterize physiological differences between a GR biotype and a glyphosate-susceptible (GS biotype from North Carolina. The GR biotype had an 18-fold level of resistance based upon rates necessary to reduce shoot fresh weight 50%. Shikimate accumulated in both biotypes following glyphosate application, but greater concentrations were found in GS plants. Absorption and translocation of 14C-glyphosate were studied in both biotypes with and without an overspray with commercial glyphosate potassium salt (840 g ae ha−1 immediately prior to 14C-glyphosate application. Greater absorption was noted 6 h after treatment (HAT in GS compared with GR plants, but no differences were observed at 12 to 72 HAT. Oversprayed plants absorbed 33 and 61% more 14C by 48 and 72 HAT, respectively, than plants not oversprayed. 14C distribution (above treated leaf, below treated leaf, roots was similar in both biotypes. Together, these results suggest that resistance in this biotype is not due to an altered target enzyme or translocation but may be in part due to the rate of glyphosate absorption. These results also are consistent with resistance being due to increased gene copy number for the target enzyme.

  16. Genetic distinctions among the Mediterranean and Chinese populations of Bemisia tabaci Q biotype and their endosymbiont Wolbachia populations

    Science.gov (United States)

    The sweetpotato whitefly, Bemisia tabaci, is a cryptic species complex composed of more than 24 different biotypes around the world. The Q biotype of B. tabaci, which is thought to have originated in the Mediterranean Basin, is now a widespread and serious agricultural pest. In this study, the genet...

  17. Molecular characteristics of penicillin-binding protein 2b, 2x and 1a sequences in Streptococcus pneumoniae isolates causing invasive diseases among children in Northeast China.

    Science.gov (United States)

    Zhou, X; Liu, J; Zhang, Z; Liu, Y; Wang, Y; Liu, Y

    2016-04-01

    Streptococcus pneumoniae is one of the common pathogens causing severe invasive infections in children. This study aimed to investigate the serotype distribution and variations of penicillin-binding proteins (PBPs) 2b, 2x and 1a in S. pneumoniae isolates causing invasive diseases in Northeast China. A total of 256 strains were isolated from children with invasive pneumococcal disease (IPD) from January 2000 to October 2014. All strains were serotyped and determined for antibiotic resistance. The amplicons of penicillin-binding domains in pbp1a, pbp2b and pbp2x genes were sequenced for variation identification. The most prevalent serotypes of isolates in IPD children were 19A, 14, 19F, 23F and 6B. 19A and 19F were the most frequent serotypes of penicillin-resistant S. pneumoniae (PRSP), which present with high resistance to amoxicillin, cefotaxime, ceftriaxone and meropenem. The numbers of amino acid substitutions of penicillin-non-susceptible S. pneumoniae (PNSP) isolates were higher than those of penicillin-sensitive S. pneumoniae isolates in all the PBP genes (p pneumoniae were closely associated with resistance to β-lactam antibiotics. This study provides new data for further monitoring of genetic changes related to the emergence and spread of resistance to β-lactam antibiotics in China.

  18. Genome Sequence of Anoxybacillus flavithermus Strain AK1, a Thermophile Isolated from a Hot Spring in Saudi Arabia

    KAUST Repository

    Khalil, Amjad

    2015-06-04

    Anoxybacillus flavithermus strain AK1 was isolated from Al-Ain Alhara, a thermal hot spring located 50 km southeast of the city of Gazan, Saudi Arabia (16°56ʹN, 43°15ʹE). The sequenced and annotated genome is 2,630,664 bp and encodes 2,799 genes.

  19. Draft Genome Sequence of Burkholderia sp. MR1, a Methylarsenate-Reducing Bacterial Isolate from Florida Golf Course Soil

    OpenAIRE

    Pawitwar, Shashank S.; Utturkar, Sagar M.; Brown, Steven D.; Yoshinaga, Masafumi; Rosen, Barry P.

    2015-01-01

    To elucidate the environmental organoarsenical biocycle, we isolated a soil organism, Burkholderia sp. MR1, which reduces relatively nontoxic pentavalent methylarsenate to the more toxic trivalent methylarsenite, with the goal of identifying the gene for the reductase. Here, we report the draft genome sequence of Burkholderia sp. MR1.

  20. Complete Genome Sequence of Lactobacillus oris J-1, a Potential Probiotic Isolated from the Human Oral Microbiome.

    Science.gov (United States)

    Jia, Fang

    2016-01-01

    Lactobacilli can exert health-promoting effects in the human oral microbiome through many mechanisms, including pathogen inhibition, maintenance of microbial balance, immunomodulation, and enhancement of the epithelial barrier function. Here, we present the complete genome sequence of a potential probiotic, Lactobacillus oris J-1, that was isolated from the oral cavity of a health child.

  1. Draft Genome Sequence of Methylophaga muralis Bur 1, a Haloalkaliphilic (Non-Methane-Utilizing) Methylotroph Isolated from a Soda Lake

    Science.gov (United States)

    Trotsenko, Yuri A.; Shmareva, Maria N.; Tarlachkov, Sergey V.; Mustakhimov, Ildar I.

    2016-01-01

    The draft genome sequence of Methylophaga muralis strain Bur 1 (VKM B-3046T), a non-methane-utilizing methylotroph isolated from a soda lake, is reported here. Strain Bur 1 possesses genes for methanol and methylamine (methylamine dehydrogenase and N-methylglutamate pathway) oxidation. Genes for the biosynthesis of ectoine were also found. PMID:27811106

  2. Complete Genome Sequence of Lactobacillus oris J-1, a Potential Probiotic Isolated from the Human Oral Microbiome

    Science.gov (United States)

    2016-01-01

    Lactobacilli can exert health-promoting effects in the human oral microbiome through many mechanisms, including pathogen inhibition, maintenance of microbial balance, immunomodulation, and enhancement of the epithelial barrier function. Here, we present the complete genome sequence of a potential probiotic, Lactobacillus oris J-1, that was isolated from the oral cavity of a health child. PMID:27634996

  3. AQU-1, a chromosomal class C β-lactamase, among clinical Aeromonas dhakensis isolates: distribution and clinical significance.

    Science.gov (United States)

    Wu, Chi-Jung; Wang, Hsuan-Chen; Chen, Po-Lin; Chang, Ming-Chung; Sunny Sun, H; Chou, Pei-Hsin; Ko, Wen-Chien

    2013-11-01

    Aeromonas dhakensis, a recently described Aeromonas sp. formerly called Aeromonas aquariorum, is associated with human infections. In this study, a chromosomal gene, blaAQU-1, was identified in A. dhakensis AAK1 that constitutes a 1143-bp open reading frame and is 87% identical to the gene encoding CepH in Aeromonas hydrophila. An Escherichia coli TOP10 cell transformant harbouring blaAQU-1 was resistant to cefotaxime but not to cefepime. mRNA expression of blaAQU-1 in the cefotaxime-resistant mutant strain AAK1m was 70-fold higher than in the wild strain AAK1. In all 16 A. dhakensis isolates (the major species of 51 consecutive Aeromonas blood isolates collected from June 1999 to June 2001) as well as in A. aquariorum MDC47(T) and A. hydrophila subsp. dhakensis LMG 19562(T), but not in the reference strains or clinical isolates of other A. hydrophila subspecies, Aeromonas caviae, Aeromonas veronii or Aeromonas enteropelogenes, blaAQU-1-related genes were detected by PCR. Overall, 13 (81%) of the 16 A. dhakensis blood isolates exhibited either cefotaxime resistance or the in vitro emergence of derepressed cefotaxime-resistant mutants. In vivo selection of an A. dhakensis resistant mutant was noted in a burn patient undergoing cefotaxime monotherapy. These observations suggest that AQU-1 is a chromosomal cephalosporinase in A. dhakensis. Cefotaxime monotherapy for severe A. dhakensis infections should be used cautiously.

  4. Draft Genome Sequence of Burkholderia sp. MR1, a Methylarsenate-Reducing Bacterial Isolate from Florida Golf Course Soil

    Science.gov (United States)

    Pawitwar, Shashank S.; Utturkar, Sagar M.; Brown, Steven D.; Yoshinaga, Masafumi

    2015-01-01

    To elucidate the environmental organoarsenical biocycle, we isolated a soil organism, Burkholderia sp. MR1, which reduces relatively nontoxic pentavalent methylarsenate to the more toxic trivalent methylarsenite, with the goal of identifying the gene for the reductase. Here, we report the draft genome sequence of Burkholderia sp. MR1. PMID:26044439

  5. Isolation of Crb1, a mouse homologue of Drosophila crumbs, and analysis of its expression pattern in eye and brain.

    NARCIS (Netherlands)

    Hollander, A.I. den; Ghiani, M.; Kok, Y.J.M. de; Wijnholds, J.; Ballabio, A.; Cremers, F.P.M.; Broccoli, V.

    2002-01-01

    Mutations in the human Crumbs homologue 1 (CRB1) gene cause severe retinal dystrophies. CRB1 is homologous to Drosophila Crumbs, a protein essential for establishing and maintaining epithelial polarity. We have isolated the mouse orthologue, Crb1, and analyzed its expression pattern in embryonic and

  6. Genome Sequence of vB_AbaS_TRS1, a Viable Prophage Isolated from Acinetobacter baumannii Strain A118.

    Science.gov (United States)

    Turner, Dann; Wand, Matthew E; Sutton, J Mark; Centron, Daniela; Kropinski, Andrew M; Reynolds, Darren M

    2016-10-13

    A novel temperate phage, vB_AbaS_TRS1, was isolated from cultures of Acinetobacter baumannii strain A118 that had been exposed to mitomycin C. Phage TRS1 belongs to the Siphoviridae family of bacteriophages and encapsulates a 40,749-bp genome encoding 70 coding sequences and a single tRNA.

  7. CHARACTERIZATION OF A NEW BIOTYPE Moringa OF SAUDI ARABIA USING RAPD AND ISSR MARKERS

    Directory of Open Access Journals (Sweden)

    Iyan Robiansyah

    2015-11-01

    Full Text Available Moringa peregrina and M. oleifera are the only Moringa species found in Saudi Arabia. Both species are drought resistant and have very high nutritional and medicinal properties. Detection of genetic diversity is of great value for the improvement of nutritional and medicinal value of these plants. The aim of the present study was to characterize a new biotype Moringa observed in Al Bahah Region, Saudi Arabia. We used 11 RAPD and 15 ISSR primers to characterize and compare the new biotype with M. peregrina and M. oleifera. Level of polymorphism generated by each marker was calculated. We also calculate Nei and Li’s coefficient to measure the genetic distance between the studied species. Level of polymorphism generated by RAPD and ISSR was 46% and 57%, respectively. RAPD and ISSR primers revealed that the new biotype shared 55 amplicons (45.08% with both M. peregrina and M. oleifera, 28 amplicons with M. peregrina (22.95%, 21 amplicons (17.21% with M. oleifera, and displayed 18 unshared amplicons (14.75%. Based on RAPD data, genetic distance between M. oleifera and M. peregrina was 0.32, whereas genetic distance between the new biotype and M. oleifera and M. peregrina was 0.21 and 0.29, respectively. For ISSR data, genetic distance between M. oleifera and M. peregrina was 0.5, whereas genetic distance between the new biotype and M. oleifera and M. peregrina was 0.36 and 0.34, respectively. Based on these results we suggested that the new biotype is a hybrid crossbred between M. peregrina and M. oleifera.

  8. Impact of the safener Mefenpyr-diethyl on herbicide resistance evolution in Alopecurus myosuroides (Huds. biotypes

    Directory of Open Access Journals (Sweden)

    Rosenhauer, Maria

    2016-02-01

    Full Text Available The evolution of herbicide resistance is an important topic in plant protection and agricultural practice. Safeners are commonly used in herbicides to protect crops against herbicidal damage. Although no effect on the weed control is expected, it has been theorized that the rate of evolution of non-target site resistance (NTSR in weeds in cereals may be enhanced by use of herbicide products containing safeners. One of the most important safeners in cereals is mefenpyr-diethyl. Therefore, the possible influence of mefenpyr on herbicide resistance was studied in cooperative trials between Bayer CropScience (BCS, F-Höchst and FH Bingen. The trials tested in parallel different herbicide resistant black-grass (Alopecurus myosuroides (Huds. biotypes under greenhouse conditions. The biotypes where chosen due to known NTSR against Atlantis WG® (4 highly resistant and 5 moderately resistant as well as two susceptible biotypes. The populations were treated with the following three herbicide/safener regimes in six concentrations adjusted according to the anticipated biotype resistance levels. (1 mesosulfuron + iodosulfuron + without safener formulation, (2 mesosulfuron + iodosulfuron + constant mefenpyr concentration (45g/ha, (3 mesosulfuron + iodosulfuron + varying mefenpyr concentrations (ratio 5:1:15. The treatments were applied in post-emergence based on mesosulfuron to iodosulfuron ratios in Atlantis WG® (5:1. The trials were assessed visually (% effect and by fresh weight. Dose-response curves were performed and ED50 values for each treatment and biotype were calculated. Results showed a varying effect of safeners which was in the most cases negligible. Depending on the biotypes mostly no impact on the safener was found for herbicide resistance. In conclusion, the trials from Bingen and F-Höchst gave evidence, that there is no significant and consistent influence of the safener mefenpyr on evolution of NTSR black-grass.

  9. Host plant effects on alkaline phosphatase activity in the whiteflies, Bemisia tabaci Biotype B and Trialeurodes vaporariorum.

    Science.gov (United States)

    Yan, Ying; Peng, Lu; Liu, Wan-Xue; Wan, Fang-Hao; Harris, Marvin K

    2011-01-01

    Bemisia tabaci (Gennadius) B-biotype and Trialeurodes vaporariorum (Westwood) (Hemiptera: Aleyrodidae) often coexist on greenhouse-grown vegetable crops in northern China. The recent spread of B. tabaci B-biotype has largely replaced T. vaporariorum, and B-biotype now overlaps with T. vaporariorum where common hosts occur in most invaded areas. The impact of the B-biotype on the agro eco system appears to be widespread, and involves the ability to compete with and perhaps replace other phytophages like T. vaporariorum. An emerging hypothesis is that the B-biotype is physiologically superior due at least in part to an improved ability to metabolically utilize the alkaline phosphatase pathway. To test this hypothesis, alkaline phosphatase activity was studied in the B-biotype and T. vaporariorum after feeding on a number of different hosts for a range of durations, with and without host switching. Alkaline phosphatase activity in T. vaporariorum was 1.45 to 2.53-fold higher than that of the B-biotype when fed on tomato for 4 and 24 h, or switched from tomato to cotton and cabbage for the same durations. However, alkaline phosphatase activity in the B-biotype was 1.40 to 3.35-fold higher than that of T. vaporariorum when the host switching time was ∼72 and ∼120 h on the same plant. Both short-term (4 h) and long-term (72 h) switching of plant hosts can significantly affect the alkaline phosphatase activity in the two species. After ∼120 h, feeding on tomato and cotton alkaline phosphatase activity in the B-biotype was significantly higher than that of T. vaporariorum. It was shown that alkaline phosphatase aids the species feeding on different plant species, and that the B-biotype is physiologically superior to T. vaporariorum in utilizing the enzyme compared to T. vaporariorum over longer periods of feeding.

  10. Isolation of pathogenic Yersinia enterocolitica 1B/O:8 from Apodemus mice in Japan.

    Science.gov (United States)

    Oda, Shinya; Kabeya, Hidenori; Sato, Shingo; Shimonagane, Ai; Inoue, Kai; Hayashidani, Hideki; Takada, Nobuhiro; Fujita, Hiromi; Kawabata, Hiroki; Maruyama, Soichi

    2015-01-01

    Yersinia enterocolitica was isolated from 15.7% (88/560) of wild rodents captured in 15 prefectures in Japan. Prevalences by rodent species were 18.0% (70/388) in Japanese field mice (Apodemus speciosus), 20% (14/71) in small Japanese field mice (Apodemus argenteus), and 11% (4/38) in gray red-backed vole (Myodes rufocanus bedfordiae), suggesting that these rodent species are important reservoirs of Y. enterocolitica. Although most of the isolates were identified as biotype 1A, the pathogenic bioserotype 1B/O:8 was detected in one of the A. speciosus and in three of the A. argenteus captured in Aomori Prefecture. It is suggested that Apodemus mice may be an important reservoir of Y. enterocolitica, and that there are foci of the pathogenic bioserotype 1B/O:8 in Aomori Prefecture, because human sporadic cases by the serotype have been reported in this prefecture.

  11. Records of Natural Enemies of Bemisia tabaci (Genn.) (Hemiptera: Aleyrodidae) Biotype B in Brazil.

    Science.gov (United States)

    Torres, L C; Lourenção, A L; Costa, V A; Souza, B; Costa, M B; Tanque, R L

    2014-04-01

    Collections of natural enemies of Bemisia tabaci biotype B (Genn.) (Hemiptera: Aleyrodidae) were made in Lavras, state of Minas Gerais, Brazil. In the greenhouse, 6,495 predators and 16,628 parasitoids belonging to three families were collected. In the field, 267 predators and 344 parasitoids belonging to five families were found. For the first time in Brazil, five species of predators associated with this whitefly were reported. Because of the diversity of natural enemies of B. tabaci biotype B recorded, this study points out the importance of these data for studies on integrated pest management.

  12. Comparison of virulence of different Actinobacillus pleuropneumoniae serotypes and biotypes using an aerosol infection model

    DEFF Research Database (Denmark)

    Jacobsen, Mariann Juul; Nielsen, Jens Peter; Nielsen, Ragnhild

    1996-01-01

    . The pigs were sacrificed 24 h after aerosol exposure and lung lesions were evaluated. In pigs exposed to aerosols of suspensions containing 10(4) CFU/ml of serotypes 2, 5b and 6, a number of 5-10 lesions of haemorrhagic necrotizing pneumonia were induced, For the biotype 2 strain the dose creating similar...... lesions was 10(9) CFU/ml. Repeated experiments confirmed these results showing similar virulence of serotypes 2, 5b and 6 whereas the biotype 2 strain proved less virulent, The aerosol infection model allowed a comparison of the number of A. pleuropneumoniae CFU/liter air which were necessary to induce...

  13. Serious systemic infection caused by non-encapsulated Haemophilus influenzae biotype III in an adult

    DEFF Research Database (Denmark)

    Lester, Anne; Pedersen, P B

    1991-01-01

    abuser. Cholangitis and acute alcoholic hepatitis were diagnosed simultaneously. The organism was grown from blood and from synovial fluid of the left knee, but several other joints were also affected. The close relationship between H. influenzae biotype III and H. aegyptius is mentioned in view......Haemophilus influenzae is the aetiological agent in less than 1% of septic arthritis cases in adults and most often serotype b is involved. We report here a case of severe systemic infection due to non-encapsulated H. influenzae biotype III in a 40-year-old man, previously healthy although alcohol...

  14. Characterisation of Yersinia pseudotuberculosis isolated from animals with yersiniosis during 1996-2013 indicates the presence of pathogenic and Far Eastern strains in Italy.

    Science.gov (United States)

    Magistrali, C F; Cucco, L; Pezzotti, G; Farneti, S; Cambiotti, V; Catania, S; Prati, P; Fabbi, M; Lollai, S; Mangili, P; Sebastiani, C; Bano, L; Dionisi, A M; Luzzi, I

    2015-10-22

    Yersinia pseudotuberculosis is a pathogen that infects both animals and humans worldwide. The epidemiology of infection caused by Y. pseudotuberculosis is poorly understood; however, its outbreaks have been traced back to a probable source in wildlife. This study aimed to characterise Y. pseudotuberculosis isolates collected from animals with yersiniosis. This study included 90 isolates of Y. pseudotuberculosis collected from different animals with yersiniosis between 1996 and 2013 in Italy. The isolates were tested for antimicrobial susceptibility and were biotyped. Genes associated with virulence plasmid pYV and those encoding O-antigen, high pathogenicity island (HPI), and superantigenic toxin (YPM) were determined by performing PCR. Pulsed-field gel electrophoresis (PFGE) was performed using NotI and SpeI enzymes, and 3 dendrograms were generated. No antibiotic resistance was found. The presence of pYV was shown in 57 out of 90 isolates. Virulence profiles of majority of the isolates indicated that they belonged to O:1a and O:1b serotypes, biotype 1, and genetic type 2. Isolates belonging to O:2a serotype were detected in sheep and cattle and were found to be associated (for the first time) with septicemia in hares. Y. pseudotuberculosis isolates belonging to O:5a and O:12-O13 serotypes were also detected in hares. To our knowledge, this is the first study to detect Y. pseudotuberculosis isolates belonging to the O:12-O13 serotype from a clinical case in Europe. Results of PFGE indicated that it was a reliable method for investigating the genetic relatedness of Y. pseudotuberculosis isolates. Thus, characterisation of Y. pseudotuberculosis infection in animals should be considered a possible tool for the surveillance of pseudotuberculosis.

  15. Alterations of pbp1a, pbp2b, and pbp2x in Streptococcus pneumoniae isolates from children with otolaryngological infectious disease in the Sapporo district of Japan.

    Science.gov (United States)

    Harimaya, Atsushi; Yokota, Shin-ichi; Sato, Kiyoshi; Koizumi, Jun-ichi; Yamazaki, Norikazu; Himi, Tetsuo; Fujii, Nobuhiro

    2006-12-01

    Evaluation of beta-lactam susceptibility and polymerase chain reaction (PCR)-based genotyping of penicillin-binding proteins (PBP) 1A, 2B, and 2X were performed for Streptococcus pneumoniae isolates from children with otolaryngological infectious disease in the Sapporo district, Hokkaido Prefecture, Japan. Of 174 S. pneumoniae isolates, 14 (8%) were penicillin-resistant S. pneumoniae (PRSP), 87 (50%) were penicillin-intermediately-resistant, and 73 (42%) were penicillin-sensitive. Seventy-six (44%) had alterations in all of the three genes examined (pbp1a, pbp2b, and pbp2x), 81 (47%) had alterations in one or two of the genes, and 17 (10%) had no alterations. Isolates with alterations in all three genes showed low susceptibility to penicillin, while, in contrast, isolates with no alteration showed relatively high susceptibility to penicillin. Similar relationships were observed for other beta-lactams. The prevalence of PRSP in our study ranged from 5% to 12.8% (average, 8%), and there was much variation in the prevalence of PBP gene alterations among the cities. The results suggest that local differences in patterns of PBP gene alterations can be observed even at the district level. PCR-based genotyping of PBP genes is rapid, convenient, and useful to investigate genetic susceptibility to beta-lactams. Further, not only nationwide or prefectural surveys but also local surveillance at the district level is important for determining antimicrobial susceptibility status in daily practice.

  16. Isolation of a (+)-δ-cadinene synthase gene CAD1-A and analysis of its expression pattern in seedlings of Gossypium arboreum L.

    Institute of Scientific and Technical Information of China (English)

    梁婉琪; 谭晓萍; 陈晓亚; Takashi; Hashimoto; Yasuyuki; Yamada; Peter; Heinstein

    2000-01-01

    The cotton sesquiterpene cyclase, (+)-δ-cadinene synthase.is encoded by a gene family, which can be divided into two subfamilies: CAD1-A and CAD1-C. The gene CAD1-A was isolated from G. arboreum. In situ hybridization performed on seven-day-old cotton seedlings localized transcripts of both the CAD1-A and CAD1-C mainly in lateral root primordium and apical ground meristem, vascular tissues of emerging lateral roots, and also in procambium and some subepidermal cells of the hypocotyl. The CAD1-A promoter showed a similar tissue-specificity in transgenic tobacco plants. Histochemistry showed occurrence of sesquiterpene aldehydes in outer cells of the lateral root tips, as well as in pigment glands. The CAD1 gene expression in G. arboreum seedlings and the spatial pattern of sesquiterpene biosynthesis constitute a chemical defense machinery in cotton seedlings.

  17. Isolation of a (+)-δ-cadinene synthase gene CAD1-A and analysis of its expression pattern in seedlings of Gossypium arboreum L.

    Institute of Scientific and Technical Information of China (English)

    2000-01-01

    The cotton sesquiterpene cyclase,(+)-δ-cadinene synthase,is encoded by a gene family,which can be divided into two subfamilies:CAD1-A and CAD1-C.The gene CAD1-A was isolated from G.arboreum.In situ hybridization performed on seven-day-old cotton seedlings localized transcripts of both the CAD1-A and CAD1-C mainly in lateral root primordium and apical ground meristem,vascular tissues of emerging lateral roots,and also in procambium and some subepidermal cells of the hypocotyl.The CAD1-A promoter showed a similar tissue-specificity in transgenic tobacco plants.Histochemistry showed occurrence of sesquiterpene aldehydes in outer cells of the lateral root tips,as well as in pigment glands.The CAD1 gene expression in G.arboreum seedlings and the spatial pattern of sesquiterpene biosynthesis constitute a chemical defense machinery in cotton seedlings.

  18. Biotype status and genetic polymorphism of the whitefly Bemisia tabaci (Hemiptera: Aleyrodidae) in Greece: mitochondrial DNA and microsatellites.

    Science.gov (United States)

    Tsagkarakou, A; Tsigenopoulos, C S; Gorman, K; Lagnel, J; Bedford, I D

    2007-02-01

    The genetic polymorphism and the biotype identity of the tobacco whitefly Bemisia tabaci (Gennadius) have been studied in population samples taken from different localities within Greece from cultivated plants growing in greenhouses or in open environments and from non-cultivated plants. Two different approaches were used: sequencing of the mitochondrial cytochrome oxidase I (mtCOI) gene and genotyping using microsatellite markers. Analyses of the mtCOI sequences revealed a high homogeneity between the Greek samples which clustered together with Q biotype samples that had been collected from other countries. When genetic polymorphism was examined using six microsatellite markers, the Greek samples, which were all characterized as Q biotype were significantly differentiated from each other and clustered into at least two distinct genetic populations. Moreover, based on the fixed differences revealed by the mtCOI comparison of known B. tabaci biotype sequences, two diagnostic tests for discriminating between Q and B and non-Q/non-B biotypes were developed. Implementation of these diagnostic tools allowed an absence of the B biotype and presence of the Q biotype in the Greek samples to be determined.

  19. Reproduction and Population Dynamics as Biotypic Markers of Russian Wheat Aphid Diuraphis noxia (Kurdjumov).

    Science.gov (United States)

    Ngenya, Watson; Malinga, Joyce; Tabu, Isaiah; Masinde, Emily

    2016-04-02

    Russian wheat aphid Diuraphis noxia (Kurdjumov) is widely established in wheat-growing countries where it causes significant economic losses. The development and use of Russian wheat aphid (RWA)-resistant wheat varieties has been constrained by the variation in resident RWA populations and the evolution of virulent biotypes. An experiment was set up at the Kenya Agricultural and Livestock Research Organization (KALRO), Njoro, to characterize RWA populations based on phenotypic characteristics of reproduction, development and population dynamics. RWA populations from the regions of Eldoret, Mau Narok and Njoro were used in the study. A factorial experiment was set up in randomized complete block design replicated eleven times. A single day-old nymph was placed on a new, fully-open leaf in a 0.5 cm-diameter clear plastic straw leaf cage and observed daily for its entire lifetime. The results showed that there were variations in aphid lifespan, reproductive longevity and aphid fecundity between populations, indicating that the phenotypic markers used to determine biotypes were good enough to show distinct biotypes among populations of the RWA in Kenya. Further, the study concluded that the use of phenotypic life and reproductive markers was a valid way of characterizing biotypes of RWA worldwide.

  20. Evaluation and reselection of wheat resistance to Russian wheat aphid biotype 2

    Science.gov (United States)

    Russian wheat aphid (RWA, Diuraphis noxia, Mordvilko) biotype 2 (RWA2) is virulent to most known RWA resistance genes and severely threatens wheat production in the hard winter wheat area of the US western Great Plains. We determined RWA2 reactions of 386 cultivars from China, 227 advanced breeding...

  1. Characteristics of periodontal biotype, its dimensions, associations and prevalence: a systematic review

    NARCIS (Netherlands)

    Zweers, J.; Thomas, R.Z.; Slot, D.E.; Weisgold, A.S.; van der Weijden, G.A.

    2014-01-01

    Aim The objectives of this review were as follows: What are characteristics used to define various forms of periodontal biotypes? What are their anatomic dimensions in relation to the definition? In addition, what is the association between these various characteristics in relation to the periodonta

  2. Reproduction and Population Dynamics as Biotypic Markers of Russian Wheat Aphid Diuraphis noxia (Kurdjumov

    Directory of Open Access Journals (Sweden)

    Watson Ngenya

    2016-04-01

    Full Text Available Russian wheat aphid Diuraphis noxia (Kurdjumov is widely established in wheat-growing countries where it causes significant economic losses. The development and use of Russian wheat aphid (RWA-resistant wheat varieties has been constrained by the variation in resident RWA populations and the evolution of virulent biotypes. An experiment was set up at the Kenya Agricultural and Livestock Research Organization (KALRO, Njoro, to characterize RWA populations based on phenotypic characteristics of reproduction, development and population dynamics. RWA populations from the regions of Eldoret, Mau Narok and Njoro were used in the study. A factorial experiment was set up in randomized complete block design replicated eleven times. A single day-old nymph was placed on a new, fully-open leaf in a 0.5 cm-diameter clear plastic straw leaf cage and observed daily for its entire lifetime. The results showed that there were variations in aphid lifespan, reproductive longevity and aphid fecundity between populations, indicating that the phenotypic markers used to determine biotypes were good enough to show distinct biotypes among populations of the RWA in Kenya. Further, the study concluded that the use of phenotypic life and reproductive markers was a valid way of characterizing biotypes of RWA worldwide.

  3. Comparison of outer membrane protein and biochemical profiles of Haemophilus aegyptius and Haemophilus influenzae biotype III.

    Science.gov (United States)

    Carlone, G M; Sottnek, F O; Plikaytis, B D

    1985-11-01

    Haemophilus aegyptius and Haemophilus influenzae biotype III are morphologically and biochemically similar; however, their outer membrane protein (Sarkosyl insoluble) profiles are distinct. Of 18 strains of H. aegyptius examined, 15 had a type 1 protein profile, and 3 had a type 2 profile, whereas the 5 strains of H. influenzae biotype III examined had three other protein profile types. All Haemophilus strains examined had 31- and 76-kilodalton (kDa) proteins and minor proteins with molecular masses between 20 and 100 kDa. H. aegyptius, with a type 1 protein profile, had major outer membrane proteins with apparent molecular masses of 27, 35.5, and 41.5 kDa, and H. aegyptius, with a type 2 protein profile, had 26-, 29-, 39.5-, and 41-kDa proteins. The type strain of H. influenzae biotype III had three major outer membrane proteins with apparent molecular masses of 29, 38.5 and 40 kDa. Four other strains designated as H. influenzae biotype III had major outer membrane proteins between 27 and 41.5 kDa representing two additional protein profiles.

  4. Invasive mechanism and manasement stratesy of Bemisia tabaci (Gennadius) biotype B: Progress report of 973 Program on invasive alien species in China

    Institute of Scientific and Technical Information of China (English)

    WAN FangHao; CUI XuHong; ZHANG LiPing; ZHANG Fan; ZHANG QingWen; LIU WanXue; LIANG Pei; LEI ZhongRen; ZHANG YongJun; ZHANG GuiFen; LIU ShuSheng; LUO Chen; CHU Dong; ZHANG YouJun; ZANG LianSheng; JIU Min; Lǖ ZhiChuang

    2009-01-01

    Bemisia tabaci (Gennadius) biotype B, called a "superbug", is one of the most harmful biotypes of this species complex worldwide. In this report, the invasive mechanism and management of B. tabaci bio-type B, based on our 5-year studies, are presented. Six B. tabaci biotypes, B, Q, ZHJ1, ZHJ2, ZHJ3 and FJ1, have been identified in China. Biotype B dominates the other biotypes in many regions of the country. Genetic diversity in biotype B might be induced by host plant, geographical conditions, and/or insecticidal application. The activities of CarE (carboxylesterase) and GSTs (glutathione-S-transferase) in biotype B reared on cucumber and squash were greater than on other host plants, which might have increased its resistance to insecticides. The higher activities of detoxification enzymes in biotype B might be induced by the secondary metabolites in host plants. Higher adaptive ability of biotype B adults to adverse conditions might be linked to the expression of heat shock protein genes. The in-digenous B. tabaci biotypes were displaced by the biotype B within 225 d. The asymmetric mating in-teractions and mutualism between biotype B and begomoviruses via its host plants speed up wide-spread invasion and displacement of other biotypes. B. tabaci biotype B displaced Trialeurodes vapo-rariorum (Westwood) after 4-7 generations under glasshouse conditions. Greater adaptive ability of the biotype B to adverse conditions and its rapid population increase might be the reasons of its suc-cessful displacement of T. vaporariorum. Greater ability of the biotype B to switch to different host plants may enrich its host plants, which might enable it to better compete with T. vaporariorum. Native predatory natural enemies possess greater ability to suppress B. tabaci under field conditions. The kairomones in the 3rd and 4th instars of biotype B may provide an important stimulus in host searching and location by its parasitoids. The present results provide useful information in

  5. Invasive mechanism and management strategy of Bemisia tabaci(Gennadius) biotype B:Progress report of 973 Program on invasive alien species in China

    Institute of Scientific and Technical Information of China (English)

    2009-01-01

    Bemisia tabaci(Gennadius) biotype B,called a "superbug",is one of the most harmful biotypes of this species complex worldwide.In this report,the invasive mechanism and management of B.tabaci biotype B,based on our 5-year studies,are presented.Six B.tabaci biotypes,B,Q,ZHJ1,ZHJ2,ZHJ3 and FJ1,have been identified in China.Biotype B dominates the other biotypes in many regions of the country.Genetic diversity in biotype B might be induced by host plant,geographical conditions,and/or insecticidal application.The activities of CarE(carboxylesterase) and GSTs(glutathione-S-transferase) in biotype B reared on cucumber and squash were greater than on other host plants,which might have increased its resistance to insecticides.The higher activities of detoxification enzymes in biotype B might be induced by the secondary metabolites in host plants.Higher adaptive ability of biotype B adults to adverse conditions might be linked to the expression of heat shock protein genes.The indigenous B.tabaci biotypes were displaced by the biotype B within 225 d.The asymmetric mating interactions and mutualism between biotype B and begomoviruses via its host plants speed up widespread invasion and displacement of other biotypes.B.tabaci biotype B displaced Trialeurodes vaporariorum(Westwood) after 4-7 generations under glasshouse conditions.Greater adaptive ability of the biotype B to adverse conditions and its rapid population increase might be the reasons of its successful displacement of T.vaporariorum.Greater ability of the biotype B to switch to different host plants may enrich its host plants,which might enable it to better compete with T.vaporariorum.Native predatory natural enemies possess greater ability to suppress B.tabaci under field conditions.The kairomones in the 3rd and 4th instars of biotype B may provide an important stimulus in host searching and location by its parasitoids.The present results provide useful information in explaining the mechanisms of genetic diversity

  6. Invasive mechanism and management strategy of Bemisia tabaci (Gennadius) biotype B: progress report of 973 Program on invasive alien species in China.

    Science.gov (United States)

    Wan, FangHao; Zhang, GuiFen; Liu, ShuSheng; Luo, Chen; Chu, Dong; Zhang, YouJun; Zang, LianSheng; Jiu, Min; Lü, ZhiChuang; Cui, XuHong; Zhang, LiPing; Zhang, Fan; Zhang, QingWen; Liu, WanXue; Liang, Pei; Lei, ZhongRen; Zhang, YongJun

    2009-01-01

    Bemisia tabaci (Gennadius) biotype B, called a "superbug", is one of the most harmful biotypes of this species complex worldwide. In this report, the invasive mechanism and management of B. tabaci biotype B, based on our 5-year studies, are presented. Six B. tabaci biotypes, B, Q, ZHJ1, ZHJ2, ZHJ3 and FJ1, have been identified in China. Biotype B dominates the other biotypes in many regions of the country. Genetic diversity in biotype B might be induced by host plant, geographical conditions, and/or insecticidal application. The activities of CarE (carboxylesterase) and GSTs (glutathione-S-transferase) in biotype B reared on cucumber and squash were greater than on other host plants, which might have increased its resistance to insecticides. The higher activities of detoxification enzymes in biotype B might be induced by the secondary metabolites in host plants. Higher adaptive ability of biotype B adults to adverse conditions might be linked to the expression of heat shock protein genes. The indigenous B. tabaci biotypes were displaced by the biotype B within 225 d. The asymmetric mating interactions and mutualism between biotype B and begomoviruses via its host plants speed up widespread invasion and displacement of other biotypes. B. tabaci biotype B displaced Trialeurodes vaporariorum (Westwood) after 4-7 generations under glasshouse conditions. Greater adaptive ability of the biotype B to adverse conditions and its rapid population increase might be the reasons of its successful displacement of T. vaporariorum. Greater ability of the biotype B to switch to different host plants may enrich its host plants, which might enable it to better compete with T. vaporariorum. Native predatory natural enemies possess greater ability to suppress B. tabaci under field conditions. The kairomones in the 3rd and 4th instars of biotype B may provide an important stimulus in host searching and location by its parasitoids. The present results provide useful information in

  7. Isolation and characterization of the Arabidopsis heat-intolerant 2 (hit2) mutant reveal the essential role of the nuclear export receptor EXPORTIN1A (XPO1A) in plant heat tolerance.

    Science.gov (United States)

    Wu, Shin-Jye; Wang, Lian-Chin; Yeh, Ching-Hui; Lu, Chun-An; Wu, Shaw-Jye

    2010-06-01

    *The Arabidopsis heat-intolerant 2 (hit2) mutant was isolated on the basis of its impaired ability to withstand moderate heat stress (37 degrees C). Determination of the genetic mutation that underlies the hit2 thermosensitive phenotype allowed better understanding of the mechanisms by which plants cope with heat stress. *Genetic analysis revealed that hit2 is a single recessive mutation. Map-based cloning was used to identify the hit2 locus. The response of hit2 to other types of heat stress was also investigated to characterize the protective role of HIT2. *hit2 was defective in basal but not in acquired thermotolerance. hit2 was sensitive to methyl viologen-induced oxidative stress, and the survival of hit2 seedlings in response to heat stress was affected by light conditions. The mutated locus was located at the EXPORTIN1A (XPO1A) gene, which encodes a nuclear transport receptor. Two T-DNA insertion lines, xpo1a-1 and xpo1a-3, exhibited the same phenotypes as hit2. *The results provide evidence that Arabidopsis XPO1A is dispensable for normal plant growth and development but is essential for thermotolerance, in part by mediating the protection of plants against heat-induced oxidative stress.

  8. Genetic diversity of Gallibacterium anatis isolates from different chicken flocks

    DEFF Research Database (Denmark)

    Bojesen, A.M.; Torpdahl, Mia; Christensen, H.

    2003-01-01

    of chickens from an organic, egg-producing flock and a layer parent flock. A subset of strains was also characterized by pulsed-field gel electrophoresis and biotyping. The organic flock isolates were characterized by more than 94% genetic similarity, indicating that only a single clone was apparent...

  9. Ozone and Water Stress: Effects on the Behaviour of Two White Clover Biotypes

    Directory of Open Access Journals (Sweden)

    Massimo Fagnano

    Full Text Available ozone pollution, water stress, stomata conductance, ozone uptake, clover, OTC.Ozone is a strong oxidizing pollutant which derives by alteration of the photolytic NOx cycle and it accumulates in the troposphere spreading in rural areas and therefore determining injuries on natural vegetation and crops. Since its penetration occurs mainly through stomata, all factors which alter plant-atmosphere relations could be able to modify plant response to ozone. Interaction between ozone and water stress in Mediterranean environment was studied on ozone resistant and sensitive biotypes of white clover, which were grown in charcoal filtered and notfiltered Open Top Chambers in factorial combination with different levels of water supply. Measurements of biomass, leaf area and stomatal conductance were made during the growth period. Ozone injuries were estimated as not-filtered/filtered OTC yield ratio; the stomatal flux of ozone was estimated multiplying stomata conductance x diffusivity ratio between ozone and water vapour (0.613 x ozone hourly concentrations. The hourly values of ozone uptake were cumulated throughout the cropping periods of the two years. In the sensitive biotype, water stress reduced yield losses due to ozone from 38% to 22%, as well as yield losses due to water stress were reduced by the presence of ozone from 43% to 29%, while no interaction between ozone and water stress was observed in the resistant biotype. Biomass yield losses of the sensitive biotype were strictly correlated to cumulated ozone uptake (R2 = 0.99, while biomass yield losses of the resistant biotype were not affected by the ozone fluxes variations created by the treatments. Flux based models could better estimate yield losses due to ozone in Mediterranean environments in which other stresses could be contemporary present; therefore, the new European directives might replace the actual thresholds based

  10. The Complete Nucleotide Sequence and Biotype Variability of Papaya leaf distortion mosaic virus.

    Science.gov (United States)

    Maoka, Tetsuo; Hataya, Tatsuji

    2005-02-01

    ABSTRACT The complete nucleotide sequence of the genome of Papaya leaf distortion mosaic virus (PLDMV) was determined. The viral RNA genome of strain LDM (leaf distortion mosaic) comprised 10,153 nucleotides, excluding the poly(A) tail, and contained one long open reading frame encoding a polyprotein of 3,269 amino acids (molecular weight 373,347). The polyprotein contained nine putative proteolytic cleavage sites and some motifs conserved in other potyviral polyproteins with 44 to 50% identities, indicating that PLDMV is a distinct species in the genus Potyvirus. Like the W biotype of Papaya ringspot virus (PRSV), the non-papaya-infecting biotype of PLDMV (PLDMV-C) was found in plants of the family Cucurbitaceae. The coat protein (CP) sequence of PLDMV-C in naturally infected-Trichosanthes bracteata was compared with those of three strains of the P biotype (PLDMV-P), LDM and two additional strains M (mosaic) and YM (yellow mosaic), which are biologically different from each other. The CP sequences of three strains of PLDMV-P share high identities of 95 to 97%, while they share lower identities of 88 to 89% with that of PLDMV-C. Significant changes in hydrophobicity and a deletion of two amino acids at the N-terminal region of the CP of PLDMV-C were observed. The finding of two biotypes of PLDMV implies the possibility that the papaya-infecting biotype evolved from the cucurbitaceae-infecting potyvirus, as has been previously suggested for PRSV. In addition, a similar evolutionary event acquiring infectivity to papaya may arise frequently in viruses in the family Cucurbitaceae.

  11. Anti-platelet effect of cumanastatin 1, a disintegrin isolated from venom of South American Crotalus rattlesnake.

    Science.gov (United States)

    Da Silva, Manuel; Lucena, Sara; Aguilar, Irma; Rodríguez-Acosta, Alexis; Salazar, Ana M; Sánchez, Elda E; Girón, Maria E; Carvajal, Zoila; Arocha-Piñango, Carmen L; Guerrero, Belsy

    2009-03-01

    Disintegrins have been previously described in the venom of several snake families inhibiting signal transduction, cell-cell interactions, and cell-matrix interactions and may have therapeutic potential in heart attacks, thrombotic diseases, and cancers. This investigation describes the first disintegrin isolated from South American Crotalus venom (Venezuelan rattlesnake Crotalus durissus cumanensis), which inhibits platelet adhesion to matrix proteins. C. d. cumanensis crude venom was first separated on a Sephadex G-100 column into 4 fractions (SI to SIV). Crude venom and SIII fraction significantly diminished platelet adhesion to fibrinogen (Fg) and to fibronectin (Fn). Anti-adhesive SIII fraction was further separated by DEAE-Sephacel followed by C-18 reverse phase high performance liquid chromatography (HPLC). The platelet anti-adhesive fraction obtained was designated as cumanastatin-1. This disintegrin has a mass of 7.442 kDa as determined by mass spectrometry (MALDI-TOF/TOF) and pI of 8.5. Cumanastatin-1 also inhibited ADP-induced platelet aggregation with an IC(50) of 158 nM. However, it did not significantly inhibit collagen and thrombin-induced platelet aggregation. Cumanastatin-1 considerably inhibited anti-alpha(IIb)beta(3) integrin binding to platelets in a dose-dependent manner; however, it did not present any effect on the alpha(5)beta(1) integrin or on P-selectin.

  12. Isolation of delta-missulenatoxin-Mb1a, the major vertebrate-active spider delta-toxin from the venom of Missulena bradleyi (Actinopodidae).

    Science.gov (United States)

    Gunning, Simon J; Chong, Youmie; Khalife, Ali A; Hains, Peter G; Broady, Kevin W; Nicholson, Graham M

    2003-11-06

    The present study describes the isolation and pharmacological characterisation of the neurotoxin delta-missulenatoxin-Mb1a (delta-MSTX-Mb1a) from the venom of the male Australian eastern mouse spider, Missulena bradleyi. This toxin was isolated using reverse-phase high-performance liquid chromatography and was subsequently shown to cause an increase in resting tension, muscle fasciculation and a decrease in indirect twitch tension in a chick biventer cervicis nerve-muscle bioassay. Interestingly, these effects were neutralised by antivenom raised against the venom of the Sydney funnel-web spider Atrax robustus. Subsequent whole-cell patch-clamp electrophysiology on rat dorsal root ganglion neurones revealed that delta-MSTX-Mb1a caused a reduction in peak tetrodotoxin (TTX)-sensitive sodium current, a slowing of sodium current inactivation and a hyperpolarising shift in the voltage at half-maximal activation. In addition, delta-MSTX-Mb1a failed to affect TTX-resistant sodium currents. Subsequent Edman degradation revealed a 42-residue peptide with unusual N- and C-terminal cysteines and a cysteine triplet (Cys(14-16)). This toxin was highly homologous to a family of delta-atracotoxins (delta-ACTX) from Australian funnel-web spiders including conservation of all eight cysteine residues. In addition to actions on sodium channel gating and kinetics to delta-ACTX, delta-MSTX-Mb1a caused significant insect toxicity at doses up to 2000 pmol/g. Delta-MSTX-Mb1a therefore provides evidence of a highly conserved spider delta-toxin from a phylogenetically distinct spider family that has not undergone significant modification.

  13. Isolation and Pharmacological Characterization of α-Elapitoxin-Ot1a, a Short-Chain Postsynaptic Neurotoxin from the Venom of the Western Desert Taipan, Oxyuranus temporalis

    Directory of Open Access Journals (Sweden)

    Carmel M. Barber

    2016-02-01

    Full Text Available Taipans (Oxyuranus spp. are elapids with highly potent venoms containing presynaptic (β and postsynaptic (α neurotoxins. O. temporalis (Western Desert taipan, a newly discovered member of this genus, has been shown to possess venom which displays marked in vitro neurotoxicity. No components have been isolated from this venom. We describe the characterization of α-elapitoxin-Ot1a (α-EPTX-Ot1a; 6712 Da, a short-chain postsynaptic neurotoxin, which accounts for approximately 30% of O. temporalis venom. α-Elapitoxin-Ot1a (0.1–1 µM produced concentration-dependent inhibition of indirect-twitches, and abolished contractile responses to exogenous acetylcholine and carbachol, in the chick biventer cervicis nerve-muscle preparation. The inhibition of indirect twitches by α-elapitoxin-Ot1a (1 µM was not reversed by washing the tissue. Prior addition of taipan antivenom (10 U/mL delayed the neurotoxic effects of α-elapitoxin-Ot1a (1 µM and markedly attenuated the neurotoxic effects of α-elapitoxin-Ot1a (0.1 µM. α-Elapitoxin-Ot1a displayed pseudo-irreversible antagonism of concentration-response curves to carbachol with a pA2 value of 8.02 ± 0.05. De novo sequencing revealed the main sequence of the short-chain postsynaptic neurotoxin (i.e., α-elapitoxin-Ot1a as well as three other isoforms found in O. temporalis venom. α-Elapitoxin-Ot1a shows high sequence similarity (i.e., >87% with other taipan short-chain postsynaptic neurotoxins.

  14. Proteomic analysis of secreted saliva from Russian wheat aphid (Diuraphis noxia Kurd.) biotypes that differ in virulence to wheat

    Science.gov (United States)

    Diuraphis noxia, Russian Wheat Aphid (RWA), biotypes are classified by their differential virulence to wheat varieties containing resistance genes. RWA salivary proteins, unlike those of most aphid species, cause foliar damage and physiological alterations in plants. A comparative proteomic analys...

  15. Exigências térmicas e estimativa do número de gerações dos biótipos "milho" e "arroz" de Spodoptera frugiperda Thermal requirements and estimate of the number of generations of biotypes "corn" and "rice" of Spodoptera frugiperda

    Directory of Open Access Journals (Sweden)

    Gustavo Rossato Busato

    2005-04-01

    Full Text Available O objetivo deste trabalho foi avaliar o efeito da temperatura sobre a biologia dos biótipos "milho" e "arroz" de Spodoptera frugiperda (J.E. Smith, 1797 (Lepidoptera: Noctuidae e estimar o número de gerações por ano em laboratório e campo. Foram coletadas lagartas de quatro populações de S. frugiperda no Estado do Rio Grande do Sul, identificadas eletroforeticamente como os biótipos "milho" e "arroz", em áreas isoladas, distanciadas entre si em mais de 300 km, produtoras de milho e arroz irrigado e em áreas adjacentes, que produzem milho e arroz irrigado lado a lado. A temperatura mais adequada para o desenvolvimento dos dois biótipos foi 25ºC. Em laboratório, podem ser obtidas 11,0 e 11,3 gerações ano-1 do biótipo "milho" proveniente de áreas isoladas e adjacentes, respectivamente. Foram estimadas 12,1 gerações ano-1 do biótipo "arroz" quando proveniente de áreas isoladas e 12,2 gerações ano-1 quando proveniente de áreas adjacentes. Em campo, estimou-se a ocorrência de 8,3 e 6,1 gerações ano-1 do biótipo "milho", respectivamente, em áreas isoladas e áreas adjacentes e 8,4 e 7,0 gerações ano-1 do biótipo "arroz", respectivamente, em áreas isoladas e áreas adjacentes. Em áreas adjacentes, o biótipo "arroz" apresenta uma geração a mais ao longo de um ano em relação ao biótipo "milho".The objective of this work was to evaluate the effect of the temperature on the biology of the biotypes "corn" and "rice" of Spodoptera frugiperda (J.E. Smith, 1797 (Lepidoptera: Noctuidae and to estimate the number of generations per year in laboratory and field. Caterpillars of four populations of S. frugiperda were collected in Rio Grande do Sul State, Brazil, identified by electrophoresis as the biotypes "corn" and "rice" in isolated areas (spaced for more than 300 km, areas of corn and irrigated rice production, as well as in adjacent areas that produces corn and rice irrigated side by side. The most appropriate

  16. Biological traits and Life table parameters A and B biotype of Bemisia tabaci (Genn. on cotton and rapeseed

    Directory of Open Access Journals (Sweden)

    Mohammad Amin Samih

    2014-06-01

    Full Text Available The aim of this work was to construct life table of Bemisia tabaci (Gen. A and B (silverleaf whitefly B. argentifolii Bellows and Perring biotype (Hem.: Aleyrodidae on two host plants; cotton, (Gossypium hirsutum L. and rapeseed, (Brassica napus L.. Experiments were conducted in a growth chamber under 24 ± 2ºC, 55±3% RH and 16:8 (L:D h photoperiod on caged plants of cotton G. hirsutum L. (Varamin 76 variety and rapeseed B. napus L. (global variety. The intrinsic rate of natural increase (r m, net reproductive rate (R0 and mean generation time (T for B. tabaci A biotype was 0.1010 females per female per day, 18.4075 females per female and 30.079 day (d on cotton; 0.1286, 30.6760 and 26.77 d on rapeseed; and for B biotype (B. argentifolii those above respective parameters averaged 0.1033, 27.8426 and 32.74 d on cotton and 0.1750, 40.75 and 21.27 d on rapeseed. The total survival of A and B biotype from the egg to adult on cotton was 22.08 and 22.25, respectively. The results showed significant differences between the two biotype reared on either host plant for gross reproductive rate (GRR, net reproductive rate (R0 or NRR, intrinsic rates of increase (r m, finite rate of increase (λ, doubling time (DT and mean generation times (Tc. To obtain a better understanding of the biology of these biotypes, Stable age distribution (Cx and some other aspects of life history related to their hosts were also studied. Based upon the results, both biotypes showed a greater reproduction capacity on rapeseed than on cotton. Thus, rapeseed was more suitable host than cotton for two biotypes and this was an important factor in host plant selection for optimizing the control strategies of these major pests.

  17. VdTX-1, a reversible nicotinic receptor antagonist isolated from venom of the spider Vitalius dubius (Theraphosidae).

    Science.gov (United States)

    Rocha-E-Silva, Thomaz A A; Rostelato-Ferreira, Sandro; Leite, Gildo B; da Silva, Pedro Ismael; Hyslop, Stephen; Rodrigues-Simioni, Léa

    2013-08-01

    Theraphosid spider venoms can block neurotransmission in vertebrate nerve-muscle preparations in vitro, but few of the components involved have been characterized. In this work, we describe the neuromuscular activity of venom from the Brazilian theraphosid Vitalius dubius and report the purification and pharmacological characterization of VdTX-1, a 728 Da toxin that blocks nicotinic receptors. Neuromuscular activity was assayed in chick biventer cervicis preparations and muscle responses to exogenous ACh and KCl were determined before and after incubation with venom or toxin. Changes in membrane resting potential were studied in mouse diaphragm muscle. The toxin was purified by a combination of filtration through Amicon® filters, cation exchange HPLC and RP-HPLC; toxin purity and mass were confirmed by mass spectrometry. Venom caused progressive neuromuscular blockade and muscle contracture; the blockade but not the contracture was reversible by washing. Venom attenuated contractures to exogenous ACh and KCl. Filtration yielded low (LM, 5 kDa) fractions, with the latter reproducing the contracture seen in venom but with a slight and progressive twitch blockade. The LM fraction caused reversible blockade and attenuated contractures to ACh, but had no effect on contractures to KCl. VdTX-1 (728 Da) purified from the LM fraction was photosensitive and reduced the E(max) to ACh in biventer cervicis muscle without affecting the EC₅₀; VdTX-1 also abolished carbachol-induced depolarizations. V. dubius venom contains at least two components that affect vertebrate neurotransmission. One component, VdTX-1, blocks nicotinic receptors non-competitively to produce reversible blockade without muscle contracture.

  18. Applicability of an in-House Saponin-Based Extraction Method in Bruker Biotyper Matrix-Assisted Laser Desorption/Ionization Time-of-Flight Mass Spectrometry System for Identification of Bacterial and Fungal Species in Positively Flagged Blood Cultures

    Directory of Open Access Journals (Sweden)

    Jung-Yien Chien

    2016-09-01

    Full Text Available We used an in-house saponin-based extraction method to evaluate the performance of the Bruker Biotyper matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF/MS system for the identification of bacteria and fungi in 405 positively flagged blood culture bottles. Results obtained from MALDI-TOF/MS were compared with those obtained using conventional phenotypic identification methods. Of the 405 positively flagged blood culture bottles, 365 showed monomicrobal growth and were correctly identified to the species (72.1% or genus (89.6% level using the Bruker Biotyper system. The remaining 40 positively flagged blood culture bottles showed polymicrobial growth. Of them, 82.5% (n=33 of the isolates were correctly identified to the species level and 92.5% (n=37 to the genus level using the Bruker Biotyper system. The overall accuracy of identification to the genus level in flagged blood cultures was 89.5% for Gram-positive organisms, 93.5% for Gram-negative pathogens and 71.9% for fungi. Confidence scores were 1.500 for 307 (75.8% bottles, 1.700 for 249 (61.5% bottles and 2.000 for 142 (35.1% bottles. None of the yeast cultures yielded scores 1.700. Using an identification-score cutoff of 1.500, the MALDI Biotyper correctly identified 99.2% of Gram-positive bacteria, 97.6% of Gram-negative bacteria and 100% of yeast isolates to the genus level and 77.6% of Gram-positive bacteria, 87.1% of Gram-negative bacteria and 100.0% of yeast isolates to the species level. The overall rate of identification using our protocol was 89.9% (364/405 for genus level identification and 73.1% (296/405 for species level identification. Yeast isolates yielded the lowest confidence scores, which compromised the accuracy of identification. Further optimization of the protein extraction procedure in positive blood cultures is needed to improve the rate of identification.

  19. Helicobacter pylori vacA s1a and s1b alleles from clinical isolates from different regions of Chile show a distinct geographic distribution

    Institute of Scientific and Technical Information of China (English)

    MI Díaz; A Kirberg; E Hebel; J Fierro; R Bravo; F Siegel; G Leon; G Klapp; A Venegas; A Valdivia; P Martínez; JL Palacios; P Harris; J Novales; E Garrido; D Valderrama; C Shilling

    2005-01-01

    AIM: To establish the most common vacA alleles in Helicobacter pylori(H pylori) strains isolated from Chilean patients and its relationship with gastritis and gastroduodenal ulcers.METHODS: Two hundred and forty five H pylori clinical isolates were obtained from 79 biopsies from Chilean infected patients suffering from gastrointestinal diseases. An average of 2-3 strains per patient was isolated and the vacA genotype was analyzed by PCR and 3% agarose electrophoresis. Some genotypes were checked by DNA sequencing.RESULTS: The most prevalent vacA genotype inChilean patients was s1b m1 (76%), followed by s1a m1 (21%). In contrast, the s2 m2 genotype was scarcely represented (3%).The s1b m1 genotype was found most frequently linked to gastropathies (P<0.05) rather than ulcers. Ulcers were found more commonly in male and older patients. Curiously, patients living in cities located North and far South of Santiago, the capital and largest Chilean city, carried almost exclusively strains with the s1b m1 genotype. In contrast, patients from Santiago and cities located South of Santiago carried strains with either one or both s1a m1 and s1b m1 genotypes.Regarding the s2 m2 genotype, comparison with GenBank sequences revealed that Chilean s2 sequence was identical to those of Australian, American, and Colombian strains but quite different from those of Alaska and India.CONCLUSION: Differences in geographic distribution of the s and m vaccA alleles in Chile and a relationship of s1b m1 genotype with gastritis were found. Sequence data in part support a hispanic origin for the vacA genotype.Asymmetric distribution of genotypes s1b m1 and s2 m2recedes H Pyloristrain distribution in Spain and Portugal.

  20. Pathogenic Yersinia enterocolitica O:3 isolated from a hunted wild alpine ibex.

    Science.gov (United States)

    Joutsen, S; Sarno, E; Fredriksson-Ahomaa, M; Cernela, N; Stephan, R

    2013-03-01

    Occurrence of Yersinia spp. in wild ruminants was studied and the strains were characterized to get more information on the epidemiology of enteropathogenic Yersinia in the wildlife. In total, faecal samples of 77 red deer, 60 chamois, 55 roe deer and 27 alpine ibex were collected during 3 months of the hunting season in 2011. The most frequently identified species was Y. enterocolitica found in 13%, 10%, 4% and 2% of roe deer, red deer, alpine ibex and chamois, respectively. Interestingly, one Y. enterocolitica O:3 strain, isolated from an alpine ibex, carried the important virulence genes located on the virulence plasmid (yadA and virF) and in the chromosome (ail, hreP, myfA and ystA). Most of the Y. enterocolitica strains belonged to biotype 1A of which 14 were ystB positive. Further studies are needed to clarify the importance of alpine ibex as a reservoir of pathogenic Y. enterocolitica.

  1. Plasmid mediated antibiotic resistance ofVibrio cholerae O1 biotype El Tor serotype Ogawa associated with an outbreak in Kolkata, India

    Institute of Scientific and Technical Information of China (English)

    Shyamapada Mandal; Manisha DebMandal; Nishith Kumar Pal

    2010-01-01

    Objective:To determine the antibiotic resistance ofVibrio cholerae (V. cholerae)O1 biotype El Tor serotype Ogawa isolates involved in an outbreak of watery diarrhea in Kolkata, and to explore the role of plasmid in mediating antibiotic resistance.Methods: Antibiotic susceptibility and minimum inhibitory concentration(MIC) values of antibiotics for the isolated V. choleraeO1 Ogawa (n=12) were determined by disk diffusion and agar dilution methods, respectively, using ampicillin (Am), chloramphenicol (C), trimethoprim (Tm), tetracycline (T), erythromycine (Er), nalidixic acid (Nx), ciprofloxacin (Cp), amikacin (Ak) and cefotaxime (Cf). Plasmid curing of multidrug resistant(MDR)V. choleraeO1 Ogawa strains was done following ethidium bromide treatment. Following electrophoresis, the plasmidDNAs, extracted from the isolatedMDRV. choleraeO1 Ogawa strains and their cured derivatives, were visualized and documented in‘gel doc’ system.Results: The outbreak causingV. choleraeO1 Ogawa isolates wereMDR as determined by disk diffusion susceptibility test, andMIC determination. The isolates showed three different drug resistance patterns: AmTmTErNx (for6 isolates), TmTErCp (for 5 isolates), and AmTmNx (for one isolate), and showed uniform sensitivity to C, Ak and Cf. The loss of plasmids with the concomitant loss of resistance to Am, Tm, T and Er of the isolates occurred following ethidium bromide treatment.Conclusions: The current findings suggest that theV. choleraeO1Ogawa associated with the cholera outbreak wereMDR, and resistance to Am, Tm, T and Er among the isolates were plasmid mediated.

  2. New Vibrio cholerae O1 Biotype ElTor bacteriophages

    Directory of Open Access Journals (Sweden)

    Sen Anindito

    2005-04-01

    Full Text Available Abstract We report the presence of three new O1 ElTor vibriophages named AS1, AS2 and AS3, isolated from the sewage and pond waters of the outskirts of Kolkata. A few phages, named AS4, with hexagonal heads and abnormally long tails with typical curly projections were also found in the water samples.

  3. Comparative proteomic analysis of horseweed (Conyza canadensis) biotypes identifies candidate proteins for glyphosate resistance

    Science.gov (United States)

    González-Torralva, Fidel; Brown, Adrian P.; Chivasa, Stephen

    2017-01-01

    Emergence of glyphosate-resistant horseweed (Conyza canadensis) biotypes is an example of how unrelenting use of a single mode of action herbicide in agricultural weed control drives genetic adaptation in targeted species. While in other weeds glyphosate resistance arose from target site mutation or target gene amplification, the resistance mechanism in horseweed uses neither of these, being instead linked to reduced herbicide uptake and/or translocation. The molecular components underpinning horseweed glyphosate-resistance remain unknown. Here, we used an in vitro leaf disc system for comparative analysis of proteins extracted from control and glyphosate-treated tissues of glyphosate-resistant and glyphosate-susceptible biotypes. Analysis of shikimic acid accumulation, ABC-transporter gene expression, and cell death were used to select a suitable glyphosate concentration and sampling time for enriching proteins pivotal to glyphosate resistance. Protein gel analysis and mass spectrometry identified mainly chloroplast proteins differentially expressed between the biotypes before and after glyphosate treatment. Chloroplasts are the organelles in which the shikimate pathway, which is targeted by glyphosate, is located. Calvin cycle enzymes and proteins of unknown function were among the proteins identified. Our study provides candidate proteins that could be pivotal in engendering resistance and implicates chloroplasts as the primary sites driving glyphosate-resistance in horseweed. PMID:28198407

  4. Putting the pieces into place: Properties of intact zinc metallothionein 1A determined from interaction of its isolated domains with carbonic anhydrase.

    Science.gov (United States)

    Pinter, Tyler B J; Stillman, Martin J

    2015-11-01

    Mammalian metallothioneins (MTs) bind up to seven Zn(2+) using a large number of cysteine residues relative to their small size and can act as zinc-chaperones. In metal-saturated Zn7-MTs, the seven zinc ions are co-ordinated tetrahedrally into two distinct clusters separated by a linker; the N-terminal β-domain [(Zn3Cys9)(3-)] and C-terminal α-domain [(Zn4Cys11)(3-)]. We report on the competitive zinc metalation of apo-carbonic anhydrase [CA; metal-free CA (apo-CA)] in the presence of apo-metallothionein 1A domain fragments to identify domain specific determinants of zinc binding and zinc donation in the intact two-domain Znn-βαMT1A (human metallothionein 1A isoform; n=0-7). The apo-CA is shown to compete effectively only with Zn2-3-βMT and Zn4-αMT. Detailed modelling of the ESI mass spectral data have revealed the zinc-binding affinities of each of the zinc-binding sites in the two isolated fragments. The three calculated equilibrium zinc affinities [log(KF)] of the isolated β-domain were: 12.2, 11.7 and 11.4 and the four isolated α-domain affinities were: 13.5, 13.2, 12.7 and 12.6. These data provide guidance in identification of the location of the strongest-bound and weakest-bound zinc in the intact two-domain Zn7βαMT. The β-domain has the weakest zinc-binding site and this is where zinc ions are donated from in the Zn7-βαMT. The α-domain with the highest affinity binds the first zinc, which we propose leads to an unscrambling of the cysteine ligands from the apo-peptide bundle. We propose that stabilization of the intact Zn6-MT and Zn7-MT, relative to that of the sum of the separated fragments, is due to the availability of additional cysteine ligand orientations (through interdomain interactions) to support the clustered structures.

  5. Isolation of volatiles from Nigella sativa seeds using microwave-assisted extraction: effect of whole extracts on canine and murine CYP1A.

    Science.gov (United States)

    Liu, Xue; Park, Jong-Hyouk; Abd El-Aty, A M; Assayed, M E; Shimoda, Minoru; Shim, Jae-Han

    2013-07-01

    The volatile components of Nigella sativa seeds were isolated using microwave-assisted extraction (MAE) and identified using gas chromatography. Further investigations were carried out to demonstrate the effects of whole extracts on canine (dog) and murine (rat) cytochrome P450 1A (CYP1A). The optimal extraction conditions of MAE were as follows: 25 mL of water, medium level of microwave oven power and 10 min of extraction time. A total of 32 compounds were identified under the conditions using GC-FID and GC-MS. Thymoquinone (38.23%), p-cymene (28.61%), 4-isopropyl-9-methoxy-1-methyl-1-cyclohexene (5.74%), longifolene (5.33%), α-thujene (3.88) and carvacol (2.31%) were the main compounds emitted from N. sativa seeds. Various extracts including pure compounds, essential oil, nonpolar partition, relatively high-polar/nonpolar partition, and polar partition extracts effectively inhibited the reaction of ethoxyresorufin O-de-ethylation, which is specified for CYP1A activity both in dog and rat. This in vitro data should be heeded as a signal of possible in vivo interactions. The use of human liver preparations would considerably strengthen the practical impact of the data generated from this study.

  6. Isoquinoline derivatives isolated from the fruit of Annona muricata as 5-HTergic 5-HT1A receptor agonists in rats: unexploited antidepressive (lead) products.

    Science.gov (United States)

    Hasrat, J A; De Bruyne, T; De Backer, J P; Vauquelin, G; Vlietinck, A J

    1997-11-01

    The fruit and the leaves of Annona muricata (Annonaceae) are used in traditional medicine for their tranquillizing and sedative properties. Extracts of the plant have been shown to inhibit binding of [3H]rauwolscine to 5-HTergic 5-HT1A receptors in calf hippocampus, and three alkaloids, annonaine (1), nornuciferine (2) and asimilobine (3), isolated from the fruit have been shown to have IC50 values of 3 microM, 9 microM and 5 microM, respectively, although in ligand-binding studies it was not possible to determine whether interaction of these ligands with the receptor was agonistic or antagonistic. This paper presents the results of functional assays of the alkaloids. The inhibition of cAMP accumulation was tested in NIH-3T3 cells stably transfected with the 5-HT1A receptor from man. None of the alkaloids showed antagonistic properties towards the 5-HT1A receptors because in the antagonistic tests no influence on the forskolin-stimulated increase of cAMP level was detected. Full agonistic properties were measured for all three compounds; the inhibition constants (Ki) for 1, 2 and 3 were Annona muricata possesses anti-depressive effects, possibly induced by compounds 1, 2 and 3, and that in the past potent leads for the development of anti-depressive therapeutics have not been used.

  7. Reduced Fitness of Virulent Aphis glycines (Hemiptera: Aphididae) Biotypes May Influence the Longevity of Resistance Genes in Soybean.

    Science.gov (United States)

    Varenhorst, Adam J; McCarville, Michael T; O'Neal, Matthew E

    2015-01-01

    Sustainable use of insect resistance in crops require insect resistance management plans that may include a refuge to limit the spread of virulence to this resistance. However, without a loss of fitness associated with virulence, a refuge may not prevent virulence from becoming fixed within a population of parthenogenetically reproducing insects like aphids. Aphid-resistance in soybeans (i.e., Rag genes) prevent outbreaks of soybean aphid (Aphis glycines), yet four biotypes defined by their capacity to survive on aphid-resistant soybeans (e.g., biotype-2 survives on Rag1 soybean) are found in North America. Although fitness costs are reported for biotype-3 on aphid susceptible and Rag1 soybean, it is not clear if virulence to aphid resistance in general is associated with a decrease in fitness on aphid susceptible soybeans. In laboratory assays, we measured fitness costs for biotype 2, 3 and 4 on an aphid-susceptible soybean cultivar. In addition, we also observed negative cross-resistance for biotype-2 on Rag3, and biotype-3 on Rag1 soybean. We utilized a simple deterministic, single-locus, four compartment genetic model to account for the impact of these findings on the frequency of virulence alleles. When a refuge of aphid susceptible was included within this model, fitness costs and negative cross-resistance delayed the increase of virulence alleles when virulence was inherited recessively or additively. If virulence were inherited additively, fitness costs decreased the frequency of virulence. Combined, these results suggest that a refuge may prevent virulent A. glycines biotypes from overcoming Rag genes if this aphid-resistance were used commercially in North America.

  8. Epidemiologic and Drug Resistance Pattern of Vibrio cholerae O1 Biotype El Tor, Serotype Ogawa, in the 2011 Cholera Outbreak, in Alborz Province, Iran

    Science.gov (United States)

    Barati, Hojatolah; Moradi, Ghobad; Rasouli, Mohammad Aziz; Mohammadi, Parvin

    2015-01-01

    Background: Although the national guidelines recommend special antibiotics, based on the antibiogram of National Reference Laboratory, it seems that, because of uncontrolled usage of antibiotics in the society and due to the changes in the serotypes causing the disease, it is essential to monitor the status of drug resistance, permanently, and to revise the current prescriptions guidelines. Objectives: This study aimed to assess the epidemiological aspects and drug resistance pattern of Vibrio cholerae O1, biotype El Tor, serotype Ogawa, in cholera outbreak, in Alborz province in Iran, during 2011. Materials and Methods: This is a cross-sectional study, which reviews a cholera epidemic that occurred in Iran. A total of 9844 specimens were taken from suspected cases, among diarrheal patients, via rectal swabs. The specimens were placed in Cary-Blair transport medium and sent to laboratory. Samples were enriched, in alkaline peptone water, and isolated on thiosulphate-citrate-bile salt-sucrose agar. From the 244 confirmed cases, 239 cases underwent antibiogram test, via disk diffusion method and based on national committee for clinical laboratory standards (NCCLS) instructions. The standard Escherichia coli ATCC 25922 was used for antibiogram quality control and, eventually, all results were interpreted and reported using NCCLS standard table. Results: In total, until October 22, 2011, which was announced as the end of outbreak, 9844 samples were taken from diarrheal patients. Regarding the type of V. cholerae, 244 El Tor biotype positive cases were reported. The case fatality rate was 1.3%. The mean age of patients was 37.8 years and the highest incidence rate occurred in the age group 21 - 30 years. After conducting antibiotic susceptibility test in the 244 V. cholerae, biotype El Tor, serotype Ogawa, it was found that ciprofloxacin had the highest level of antibiotic susceptibility (99.6%) and the highest level of antibiotic resistance was observed in co

  9. Isobolographic analysis of interaction between spinal endomorphin-1, a newly isolated endogenous opioid peptide, and lidocaine in the rat formalin test.

    Science.gov (United States)

    Hao, S; Takahata, O; Iwasaki, H

    1999-12-10

    Endomorphin-1, a newly isolated endogenous opioid ligand, has a potential affinity with mu-opioid receptor. We investigated antinociception of intrathecal endomorphin-1 and lidocaine in the rat formalin test and examined the interaction between the two agents using isobolographic analysis. Intrathecal endomorphin-1 caused dose-dependent suppression of the formalin-induced biphasic behavioral response. Intrathecal lidocaine produced dose-dependent inhibition of phase-2 behavioral response. Isobolographic analysis confirmed that combination of intrathecal endomorphin-1 and lidocaine, given at a fixed dose ratio, produced synergistic suppression of phase-2 behavioral response. These data demonstrate that spinal endomorphin-1 synergistically interacts with local anesthetic lidocaine in producing antinociception in the formalin test.

  10. The suitability of biotypes Q and B of Bemisia tabaci (Gennadius) (Hemiptera: Aleyrodidae) at different nymphal instars as hosts for Encarsia formosa Gahan (Hymenoptera: Aphelinidae).

    Science.gov (United States)

    Liu, Xin; Zhang, Youjun; Xie, Wen; Wu, Qingjun; Wang, Shaoli

    2016-01-01

    Encarsia formosa Gahan (Hymenoptera: Aphelinidae) is a solitary endoparasitoid that is commercially reared and released for augmentative biological control of whiteflies infesting greenhouse crops. In most areas in China, the invasive and destructive whitefly Bemisia tabaci (Gennadius) (Hemiptera: Aleyrodidae) biotype Q has replaced B. tabaci biotype B and has become dominant between the two. A better understanding of the suitability of different nymphal instars of B. tabaci biotypes Q and B as hosts for E. formosa is needed to improve the use of this parasitoid for biological control. Parasitism of the four nymphal instars of B. tabaci biotypes Q and B by the commercial strain of E. formosa mass reared on Trialeurodes vaporariorum (Westwood) (Hemiptera: Aleyrodidae) was assessed in the laboratory. The results indicated that E. formosa parasitized and successfully developed on all instars of both biotypes but performed best on the 3rd instar of B. tabaci biotype B and on the 2nd, 3rd, and 4th instars of B. tabaci biotype Q. The host-feeding rate of the adult parasitoid was generally higher on nymphal instars of B. tabaci biotype Q than on the corresponding nymphal instars of biotype B and was significantly higher on the 2nd and 3rd instars. For both whitefly biotypes, the parasitoid's immature developmental period was the longest on the 1st instar, intermediate on the 2nd and 3rd instars, and the shortest on the 4th instar. The parasitoid emergence rate was significantly lower on the 1st instar than on the other three instars and did not significantly differ between B. tabaci biotype B and biotype Q. Offspring longevity was greater on the 3rd and 4th instars than on the 1st instar and did not significantly differ between the two B. tabaci biotypes. The results indicate that commercially-produced E. formosa can parasitize all instars of B. tabaci biotypes B and Q, making this parasitoid a promising tool for the management of the two biotypes of B. tabaci present in

  11. Utility of MtCOI polymerase chain reaction-restriction fragment length polymorphism in differentiating between Q and B whitefly Bemisia tabaci biotypes

    Institute of Scientific and Technical Information of China (English)

    Wei-Hua Ma; Xian-Chun Li; Timothy J. Dennehy; Chao-Liang Lei; Mo Wang; Benjamin A. Degain; Robert L. Nichols

    2009-01-01

    The invasive, insecticide-resistant, Q whitefly biotype, has gradually spread to other countries including the US via human-mediated movement of plant materials. We assessed the utility of the VspI-based mtCOl (mitochondrion cytochrome oxidase I) polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP) tech-nique as a rapid, cost-effective, and reliable alternative for differentiating the Q from the dominant B biotype in Arizona. Using the standard mtCOI gene sequencing and mtCOI PCR-RFLP techniques, we biotyped eight whitefly strains of five individuals each collected from poinsettia and cotton at different locations in Arizona. Complete concordance was observed between the two methods, with three strains being identified as the Q biotype and five samples as the B biotype. We also scanned the mtCOI gene sequences for VspI polymorphisms in the B and Q biotype whiteflies currently available in the GenBank database. This global screening revealed the existence of three and four VspI polymorphic types for the Q and B biotypes, respectively. Nevertheless, all three VspI polymorphic Q biotype whiteflies shared a common and unique VspI site that can be used to differentiate Q biotype from the four VspI polymorphic B biotype whiteflies identified. These results demonstrate that the VspI-based mtCOI gene PCR-RFLP provides a reliable diagnostic tool for differentiating the Q and B biotype whiteflies in the US and elsewhere.

  12. The Fish Pathogen Vibrio vulnificus Biotype 2: Epidemiology, Phylogeny, and Virulence Factors Involved in Warm-Water Vibriosis.

    Science.gov (United States)

    Amaro, Carmen; Sanjuán, Eva; Fouz, Belén; Pajuelo, David; Lee, Chung-Te; Hor, Lien-I; Barrera, Rodolfo

    2015-06-01

    Vibrio vulnificus biotype 2 is the etiological agent of warm-water vibriosis, a disease that affects eels and other teleosts, especially in fish farms. Biotype 2 is polyphyletic and probably emerged from aquatic bacteria by acquisition of a transferable virulence plasmid that encodes resistance to innate immunity of eels and other teleosts. Interestingly, biotype 2 comprises a zoonotic clonal complex designated as serovar E that has extended worldwide. One of the most interesting virulence factors produced by serovar E is RtxA13, a multifunctional protein that acts as a lethal factor for fish, an invasion factor for mice, and a survival factor outside the host. Two practically identical copies of rtxA13 are present in all biotype 2 strains regardless of the serovar, one in the virulence plasmid and the other in chromosome II. The plasmid also contains other genes involved in survival and growth in eel blood: vep07, a gene for an outer membrane (OM) lipoprotein involved in resistance to eel serum and vep20, a gene for an OM receptor specific for eel-transferrin and, probably, other related fish transferrins. All the three genes are highly conserved within biotype 2, which suggests that they are under a strong selective pressure. Interestingly, the three genes are related with transferable plasmids, which emphasizes the role of horizontal gene transfer in the evolution of V. vulnificus in nutrient-enriched aquatic environments, such as fish farms.

  13. A missense mutation in ALDH1A3 causes isolated microphthalmia/anophthalmia in nine individuals from an inbred Muslim kindred.

    Science.gov (United States)

    Mory, Adi; Ruiz, Francesc X; Dagan, Efrat; Yakovtseva, Evgenia A; Kurolap, Alina; Parés, Xavier; Farrés, Jaume; Gershoni-Baruch, Ruth

    2014-03-01

    Nine affected individuals with isolated anophthalmia/microphthalmia from a large Muslim-inbred kindred were investigated. Assuming autosomal-recessive mode of inheritance, whole-genome linkage analysis, on DNA samples from four affected individuals, was undertaken. Homozygosity mapping techniques were employed and a 1.5-Mbp region, homozygous in all affected individuals, was delineated. The region contained nine genes, one of which, aldehyde dehydrogenase 1 (ALDH1A3), was a clear candidate. This gene seems to encode a key enzyme in the formation of a retinoic-acid gradient along the dorsoventral axis during an early eye development and the development of the olfactory system. Sanger sequence analysis revealed a missense mutation, causing a substitution of valine (Val) to methionine (Met) at position 71. Analyzing the p.Val71Met missense mutation using standard open access software (MutationTaster online, PolyPhen, SIFT/PROVEAN) predicts this variant to be damaging. Enzymatic activity, studied in vitro, showed no changes between the mutated and the wild-type ALDH1A3 protein.

  14. Tomato yellow leaf curl virus infection of tomato does not affect the performance of the Q and ZHJ2 biotypes of the viral vector Bemisia tabaci

    Institute of Scientific and Technical Information of China (English)

    Meng Li; Jian Liu; Shu-Sheng Liu

    2011-01-01

    To better understand the etiology of begomovirus epidemics in regions under invasion we need to know how indigenous and invasive whitefly vectors respond to virus infection.We investigated both direct and indirect effects of infection with Tomato yellow leaf curl virus(TYLCV)on the performance of the invasive Q biotype and the indigenous Asian ZHJ2 biotype of whitefly Bemisia tabaci.The Q biotype performed better than the ZHJ2 biotype on either uninfected or virus-infected tomato plants.However,virus-infection of host plants did not,or only marginally affected,the performance of either biotype of whiteflies m terms of fecundity,longevity,survival,development and population increase.Likewise,association of the vectors with TYLCV did not affect fecundity and longevity of the Q or ZHJ2 biotypes on cotton,a non-host of TYLCV.These results indicate that the alien Q biotype whitefly,but not the indigenous ZHJ2 biotype,is likely to become the major vector of TYLCV in the field and facilitate virus epidemics.

  15. An Exploratory Study on Assessment of Gingival Biotype and Crown Dimensions as Predictors for Implant Esthetics Comparing Caucasian and Indian Subjects

    NARCIS (Netherlands)

    Patil, Ratnadeep; van Brakel, Ralph; Mahesh, Kavita; de Putter, Cornelius; Cune, Marco S.

    2013-01-01

    Gingival biotype and crown dimensions may be important predictors for the esthetic outcome of surgical procedures. However, the visual distinction between "thick" and "thin" biotype may not be a suitable predictive parameter of surgical outcome. Intraoral photographs of 73 Indian and Dutch subjects

  16. A PCR-based strategy for simple and rapid identification of rough presumptive Salmonella isolates

    DEFF Research Database (Denmark)

    Hoorfar, Jeffrey; Baggesen, Dorte Lau; Porting, P.H.

    1999-01-01

    The purpose of the present study was to investigate the application of ready-to-go Salmonella PCR tests, based on dry chemistry, for final identification of rough presumptive Salmonella isolates. The results were compared with two different biotyping methods performed at two different laboratorie...

  17. Human immunodeficiency virus type 1 stimulatory activity by Gardnerella vaginalis: relationship to biotypes and other pathogenic characteristics.

    Science.gov (United States)

    Simoes, J A; Hashemi, F B; Aroutcheva, A A; Heimler, I; Spear, G T; Shott, S; Faro, S

    2001-07-01

    Stimulation of human immunodeficiency virus (HIV) type 1 expression by Gardnerella vaginalis is one possible cause for an increase in the amount of virus in the genital tract. The ability of G. vaginalis to induce HIV expression in chronically infected U1 cells was investigated, along with its possible relationship to biotype, genotype, and resistance to metronidazole and bacteriocin. Significant HIV stimulatory activity was found in 5 (50%) lysates of G. vaginalis. The ability to induce HIV expression in U1 cells was statistically associated with G. vaginalis biotype (P=.048) but not with genotype or resistance to metronidazole and bacteriocin. Further studies to explore the in vivo relevance of HIV activation by G. vaginalis in the female genital tract are warranted, since prevention strategies of bacterial vaginosis and colonization by certain biotypes of G. vaginalis may be valuable in reducing the risk of sexual transmission of HIV.

  18. Resistance of soybean genotypes to Bemisia tabaci (Genn.) Biotype B (Hemiptera: Aleyrodidae).

    Science.gov (United States)

    Vieira, S S; Bueno, A F; Boff, M I C; Bueno, R C O F; Hoffman-Campo, C B

    2011-01-01

    The silverleaf whitefly Bemisia tabaci (Genn.) biotype B has become a serious problem for soybean cultivation because it can significantly reduce soybean productivity. The use of soybean cultivars resistant to whitefly attack is an important strategy in an integrated pest management (IPM) program. This study evaluated the preference for oviposition and colonization by B. tabaci biotype B on different soybean genotypes. In the free-choice test, the genotypes studied were 'IAC 17' and 'IAC 19' as the standards for resistance and 'IAC Holambra Stwart' as the standard for susceptibility, as well as BABR01-0492, BABR01-0173, BABR01-1259, BABR01-1576, BABR99-4021HC, BABR99-4021HP, 'Barreiras', 'Conquista', 'Corisco', 'BRS Gralha', PI274454, PI227687, and PI171451. In the no-choice test, the four best genotypes selected in the free-choice test, in addition to the susceptible and resistant standards were evaluated. Our data indicated 'Barreiras' as the most resistant genotype against B. tabaci biotype B. 'BRS Gralha', which was the least attractive to whitefly adults in the free-choice test, did not show resistance to insect attack when they were confined in cages in the no-choice test. Despite the high number of eggs observed, BABR01-1576 and BABR99-4021HC showed a reduced number of nymphs, indicating antibiosis. The genotypes with a high level of resistance can be used as a tool against B. tabaci in IPM or as a source of resistance in plant-breeding programs.

  19. Potential adaptation of a Q biotype whitefly population from poinsettia to field crops

    Institute of Scientific and Technical Information of China (English)

    Xiangshun Hu; Timothy J. Dennehy; Xinzhi Ni; Huiyan Zhao; Robert L. Nichols; Xianchun Li

    2011-01-01

    The invasive Q biotype whitefly was first detected in the US on poinsettia in 2004 and is still not a pest outside of greenhouse environments in the US.To assess the potential for the establishment of the Q biotype on field crops,population cage experiments were conducted to compare the performance of a poinsettia-derived Q population named P'06 on poinsettia and six field crops (alfalfa,tomato,melon,cotton,cowpea and cabbage).P'06 adults reared on poinsettia as nymphs laid eggs on all six field crops.Significantly more eggs were laid on alfalfa,tomato,melon and cotton than on cabbage,cowpea and poinsettia.These eggs hatched and the nymphs developed to adults on the six field crops.Relative to poinsettia,whitefly survival was similar on cowpea,alfalfa,tomato and cabbage,but significantly higher on cotton and melon.Moreover,P'06 had significantly shorter development times from egg to adult on cotton,melon,cowpea,tomato and alfalfa than they did on poinsettia.However,the F 1 adults raised on the six field crops had significantly shorter lifespans and laid 11- to 18-fold fewer eggs than did the F1 adults raised on poinsettia.Taken together,while P'06 may have some potential to establish on field crops,the shorter lifespans and extremely low fecundities of the F1 adults raised on the six field crops suggests that P'06 is incapable of rapidly adapting to them.Poor adaptation to field crops may explain,at least partially,why the Q biotype has not established in the US field system.

  20. Brucella melitensis biotype 1 outbreak in goats in northern KwaZulu-Natal.

    Science.gov (United States)

    Reichel, R; Nel, J R; Emslie, R; Bishop, G C

    1996-06-01

    Brucella melitensis biotype 1 was confirmed in indigenous, outbred goats in three northern districts of the KwaZulu-Natal province following the diagnosis of human Malta fever in the same area. Six foci of infection were found during an extensive serological survey involving 6266 goats carried out in most of the districts of the KwaZulu-Natal province. The prevalence in the positive herds varied between 17% and 100%. The diagnosis was confirmed by culturing milk samples from serologically positive animals. Infected goats were found in only three districts (Ubombo, Ingwavuma and Pongola) and all infected herds fell within a 50-km radius.

  1. Comparison of Vibrio cholerae O139 with V. cholerae O1 classical and El Tor biotypes.

    OpenAIRE

    Calia, K E; Murtagh, M.; Ferraro, M J; Calderwood, S B

    1994-01-01

    Vibrio cholerae O139 is a recently identified non-O1 V. cholerae strain responsible for outbreaks of epidemic cholera in India, Bangladesh, and Thailand in the past 2 years. Other workers have demonstrated the presence of the cholera toxin genetic element in V. cholerae O139, unlike the situation for other non-O1 V. cholerae strains. We sought to compare further this strain with strains of V. cholerae O1, classical and El Tor biotypes, by classic microbiologic methods, Southern blot analysis ...

  2. Insights into the extremotolerance of Acinetobacter radioresistens 50v1, a gram-negative bacterium isolated from the Mars Odyssey spacecraft.

    Science.gov (United States)

    McCoy, K B; Derecho, I; Wong, T; Tran, H M; Huynh, T D; La Duc, M T; Venkateswaran, K; Mogul, R

    2012-09-01

    The microbiology of the spacecraft assembly process is of paramount importance to planetary exploration, as the biological contamination that can result from remote-enabled spacecraft carries the potential to impact both life-detection experiments and extraterrestrial evolution. Accordingly, insights into the mechanisms and range of extremotolerance of Acinetobacter radioresistens 50v1, a Gram-negative bacterium isolated from the surface of the preflight Mars Odyssey orbiter, were gained by using a combination of microbiological, enzymatic, and proteomic methods. In summary, A. radioresistens 50v1 displayed a remarkable range of survival against hydrogen peroxide and the sequential exposures of desiccation, vapor and plasma phase hydrogen peroxide, and ultraviolet irradiation. The survival is among the highest reported for non-spore-forming and Gram-negative bacteria and is based upon contributions from the enzyme-based degradation of H(2)O(2) (catalase and alkyl hydroperoxide reductase), energy management (ATP synthase and alcohol dehydrogenase), and modulation of the membrane composition. Together, the biochemical and survival features of A. radioresistens 50v1 support a potential persistence on Mars (given an unintended or planned surface landing of the Mars Odyssey orbiter), which in turn may compromise the scientific integrity of future life-detection missions.

  3. pGIAK1, a heavy metal resistant plasmid from an obligate alkaliphilic and halotolerant bacterium isolated from the Antarctic Concordia station confined environment.

    Directory of Open Access Journals (Sweden)

    Suxia Guo

    Full Text Available pGIAK1 is a 38-kb plasmid originating from the obligate alkaliphilic and halotolerant Bacillaceae strain JMAK1. The strain was originally isolated from the confined environments of the Antarctic Concordia station. Analysis of the pGIAK1 38,362-bp sequence revealed that, in addition to its replication region, this plasmid contains the genetic determinants for cadmium and arsenic resistances, putative methyltransferase, tyrosine recombinase, spore coat protein and potassium transport protein, as well as several hypothetical proteins. Cloning the pGIAK1 cad operon in Bacillus cereus H3081.97 and its ars operon in Bacillus subtilis 1A280 conferred to these hosts cadmium and arsenic resistances, respectively, therefore confirming their bona fide activities. The pGIAK1 replicon region was also shown to be functional in Bacillus thuringiensis, Bacillus subtilis and Staphylococcus aureus, but was only stably maintained in B. subtilis. Finally, using an Escherichia coli - B. thuringiensis shuttle BAC vector, pGIAK1 was shown to display conjugative properties since it was able to transfer the BAC plasmid among B. thuringiensis strains.

  4. Identification and typing of free-living Acanthamoeba spp. by MALDI-TOF MS Biotyper.

    Science.gov (United States)

    Del Chierico, Federica; Di Cave, David; Accardi, Cristel; Santoro, Maristella; Masotti, Andrea; D'Alfonso, Rossella; Berrilli, Federica; Urbani, Andrea; Putignani, Lorenza

    2016-11-01

    Over the years, the potential pathogenicity of Acanthamoeba for humans and animals has gained increasing attention from the scientific community. More than 24 species belong to this genus, however only some of them are causative agents of keratitis and encephalitis in humans. Due to technical difficulties in diagnosis, these infections are likely to be under-detected. The introduction of 18S rDNA amplification for the identification of Acanthamoeba has dramatically enhanced diagnosis performances, but the attestation of genotyping requires supplementary sequencing-based procedures. In this study, 15 Acanthamoeba strains were collected and grown on nutrient agar media. Each strain was genotyped by end-point PCR assay for the amplification of the 18S rDNA gene and the genotype was assigned by sequencing analysis through neighbor joining phylogenetic tree. In order to optimize standardization of the MALDI-TOF MS assay, we established the collection time point at the cystic phase. Two strains of each genotype were randomly chosen to customize the biotyper database. For all strains, 24 spectral measurements were acquired and submitted to identification and cluster analysis of spectra. The obtained results highlighted the correct identification of Acanthamoeba strains and the overlapping of spectra dendrogram clusters to the 18S genotype assignations. In conclusion, the MALDI-TOF MS Biotyper revealed the capability to identify and genotype the Acanthamoeba strains, providing a new frontier in the diagnostic identification of amaebae and in taxonomic and phylogenetic studies.

  5. Effects of selected fertilizers on the life history of Bemisia tabaci (Hemiptera: Aleyrodidae) biotype B.

    Science.gov (United States)

    England, K M; Sadof, C S; Cañnas, L A; Kuniyoshi, C H; Lopez, R G

    2011-04-01

    We tested the effects among a purportedly sustainable water-soluble fertilizer, a conventional water-soluble fertilizer, an alternation of these, a controlled-release fertilizer, and a clear water control on the life-history traits of sweetpotato whitefly, Bemisia tabaci (Gennadius) (Hemiptera: Aleyrodidae; =Bemisia argentifolii Bellows & Perring) biotype B reared on poinsettia (Euphorbia pulcherrima Willdenow ex Klotzch). Free amino acids in petioles were measured to estimate plant nutrient assimilation and phloem nutritional quality for B. tabaci biotype B. The sustainable fertilizer produced plants with the highest concentration of amino acids. In contrast, fecundity of whiteflies was lowest in plants treated with the sustainable fertilizer and the water control. The relationship between total amino acids in phloem and survival was significantly quadratic, with the highest survival at intermediate levels. Fecundity, however, was negatively correlated with total amino acid content of the maternal host plant. Variation in total amino acid concentration in petioles of plants treated within fertilizer treatments makes it difficult to predict whether a particular fertilizer will produce plants with enough amino acids to deleteriously affect both survivorship and fecundity and yet yield a plant of good quality. Despite this limitation, we can conclude that the use of this sustainable fertilizer will not cause increases in whitefly populations relative to plants fertilized with water-soluble and slow-release fertilizers that deliver the same level of nitrogen to the plant.

  6. Implementing the Bruker MALDI Biotyper in the Public Health Laboratory for C. botulinum Neurotoxin Detection

    Directory of Open Access Journals (Sweden)

    Michael J. Perry

    2017-03-01

    Full Text Available Currently, the gold standard method for active botulinum neurotoxin (BoNT detection is the mouse bioassay (MBA. A Centers for Disease Control and Prevention-developed mass spectrometry (MS-based assay that detects active BoNT was successfully validated and implemented in a public health laboratory in clinical matrices using the Bruker MALDI-TOF MS (Matrix-assisted laser desorption ionization–time of flight mass spectrometry Biotyper. For the first time, a direct comparison with the MBA was performed to determine MS-based assay sensitivity using the Bruker MALDI Biotyper. Mice were injected with BoNT/A, /B, /E, and /F at concentrations surrounding the established MS assay limit of detection (LOD and analyzed simultaneously. For BoNT/B, /E, and /F, MS assay sensitivity was equivalent or better than the MBA at 25, 0.3, and 8.8 mLD50, respectively. BoNT/A was detected by the MBA between 1.8 and 18 mLD50, somewhat more sensitive than the MS method of 18 mLD50. Studies were performed to compare assay performance in clinical specimens. For all tested specimens, the MS method rapidly detected BoNT activity and serotype in agreement with, or in the absence of, results from the MBA. We demonstrate that the MS assay can generate reliable, rapid results while eliminating the need for animal testing.

  7. Studies on the Host Biotypes and Its Cause of Cotton Aphid in Nanjing, China

    Institute of Scientific and Technical Information of China (English)

    LIU Xiang-dong; ZHAI Bao-ping; ZHANG Xiao-xi

    2002-01-01

    The fitness of cotton aphid, Aphis gossypii Glover, on different host plants was studied. The results showed that the cotton aphid population in Nanjing formed host preference bio-types on cucumber and cotton. The aphids from cotton and cucumber could not inter-transplant successfully between the two host plants. The apterous and alate offspring of stem mother from hibiscus could not survive, reproduce and form population normally when they were transplanted to cucumber and water melon, but they could form normally when transplanted to cotton and muskmelon. There was no significant difference between the stylet length of cotton aphids from cucumber and cotton, so the stylet length was not the cause of the host preference. When the aphids originated on hibiscus were transplanted to cotton, water melon and muskmelon, the stylet could reach host phloem to absorb host plant's nutrients, but it couldn't when transplanted to cucumber. Cotton aphid can feed on muskmelon without secretion of water-soluble saliva. It could be concluded that the two host biotypes of cotton aphid came from different winter host plants.

  8. Characterization of red rice in the province of Sancti Spiritus, Cuba. I. Biotypes of straw-colored glumes.

    Directory of Open Access Journals (Sweden)

    Jorge García de la Osa

    2013-12-01

    Full Text Available Trials were made in The Research Local Station of Grains areas, Sur del Jíbaro from 2005 through 2011. 27 morpho-agronomic characters were evaluated regarding the main red rice biotypes of straw-colored glumes in the province of Sancti Spíritus, Cuba, and in three commercial varieties of witness rice (IACuba-31, Perla de Cuba y Jucarito-104. It also was determined a broad diversity and variations in these features that permitted to differenciate the biotypes between them and with other rice cultivars. The purple pigmentation in some parts of the plants in the great majority of such biotype is an observable feature, seen easily, that make contrasts with the already researched, by which it helps a lot in identifying them. The great majority of the biotypes of straw-colored glumes featured an over-growned size in their sprouts, lengths and longer flag leaves, with also a prone feature to loose its grain, its nighty, broad seed and a particular resistance to Pyricularia grisea; but shorter and lighter but it also yields less per hectares. it has shown resistant to Tagosodes orizicolus, respecting the witness cultivars.

  9. First report of Bemisia tabaci biotype Q in Costa Rica and detection of viruliferous whiteflies in greenhouses

    Science.gov (United States)

    Whiteflies are a complex that comprises multiple species and biotypes or races which are capable of affecting crops by phloem feeding, virus transmission and promotion of fungal colonization. The distribution of these pests is worldwide. In Costa Rica, a country located in the tropics, the most prob...

  10. Resistance to a new biotype of the lettuce aphid Nasonovia ribisnigri in Lactuca virosa accession IVT280

    NARCIS (Netherlands)

    Broeke, ten C.J.M.; Dicke, M.; Loon, van J.J.A.

    2013-01-01

    Host plant resistance is an effective protection strategy to control aphids in many crops. However, the evolution of insensitive aphid biotypes necessitates the search for new resistance sources. Wild relatives of crop plants can be important sources for resistance genes to be introgressed into new

  11. Improved DNA barcoding method for Bemisia tabaci and related Aleyrodidae: development of universal and Bemisia tabaci biotype-specific mitochondrial cytochrome c oxidase I polymerase chain reaction primers.

    Science.gov (United States)

    Shatters, Robert G; Powell, Charles A; Boykin, Laura M; Liansheng, He; McKenzie, C L

    2009-04-01

    Whiteflies, heteropterans in the family Aleyrodidae, are globally distributed and severe agricultural pests. The mitochondrial cytochrome c oxidase I (mtCOI) sequence has been used extensively in whitefly phylogenetic comparisons and in biotype identification of the agriculturally important Bemisia tabaci (Gennadius) whitefly. Because of the economic importance of several whitefly genera, and the invasive nature of the B and the Q biotypes of Bemisia tabaci, mtCOI sequence data are continually generated from sampled populations worldwide. Routine phylogenetic comparisons and biotype identification is done through amplification and sequencing of an approximately 800-bp mtCOI DNA fragment. Despite its routine use, published primers for amplification of this region are often inefficient for some B. tabaci biotypes and especially across whitefly species. Through new sequence generation and comparison to available whitefly mtCOI sequence data, a set of polymerase chain reaction (PCR) amplification primers (Btab-Uni primers) were identified that are more efficient at amplifying approximately 748 bp of the approximately 800-bp fragment currently used. These universal primers amplify an mtCOI fragment from numerous B. tabaci biotypes and whitefly genera by using a single amplification profile. Furthermore, mtCOI PCR primers specific for the B, Q, and New World biotypes of B. tabaci were designed that allow rapid discrimination among these biotypes. These primers produce a 478-, 405-, and 303-bp mtCOI fragment for the B, New World, and Q biotypes, respectively. By combining these primers and using rapid PCR and electrophoretic techniques, biotype determination can be made within 3 h for up to 96 samples at a time.

  12. Highly variable penicillin resistance determinants PBP 2x, PBP 2b, and PBP 1a in isolates of two Streptococcus pneumoniae clonal groups, Poland 23F-16 and Poland 6B-20.

    Science.gov (United States)

    Izdebski, Radoslaw; Rutschmann, Jens; Fiett, Janusz; Sadowy, Ewa; Gniadkowski, Marek; Hryniewicz, Waleria; Hakenbeck, Regine

    2008-03-01

    Penicillin-binding proteins (PBPs) in representatives of two Streptococcus pneumoniae clonal groups that are prevalent in Poland, Poland 23F-16 and Poland 6B-20, were investigated by PBP profile analysis, antibody reactivity pattern analysis, and DNA sequence analysis of the transpeptidase (TP) domain-encoding regions of the pbp2x, pbp2b, and pbp1a genes. The isolates differed in their MICs of beta-lactam antibiotics. The majority of the 6B isolates were intermediately susceptible to penicillin (penicillin MICs, 0.12 to 0.5 microg/ml), whereas all 23F isolates were penicillin resistant (MICs, >or=2 microg/ml). The 6B isolates investigated had the same sequence type (ST), determined by multilocus sequence typing, as the Poland 6B-20 reference strain (ST315), but in the 23F group, isolates with three distinct single-locus variants (SLVs) in the ddl gene (ST173, ST272, and ST1506) were included. None of the isolates showed an identical PBP profile after labeling with Bocillin FL and sodium dodecyl sulfate-polyacrylamide gel electrophoresis, and only one pair of 6B isolates and one pair of 23F isolates (ST173 and ST272) each contained an identical combination of PBP 2x, PBP 2b, and PBP 1a TP domains. Some 23F isolates contained PBP 3 with an apparently higher electrophoretic mobility, and this feature also did not correlate with their STs. The data document a highly variable pool of PBP genes as a result of multiple gene transfer and recombination events within and between different clonal groups.

  13. Phenotyping and genotyping methods applied to investigate the relatedness of Brazilian isolates of Enterobacter cloacae

    Directory of Open Access Journals (Sweden)

    A.L.C. Darini

    1999-09-01

    Full Text Available In order to evaluate the resolving power of several typing methods to identify relatedness among Brazilian strains of Enterobacter cloacae, we selected twenty isolates from different patients on three wards of a University Hospital (Orthopedics, Nephrology, and Hematology. Traditional phenotyping methods applied to isolates included biotyping, antibiotic sensitivity, phage-typing, and O-serotyping. Plasmid profile analysis, ribotyping, and macrorestriction analysis by pulsed-field gel electrophoresis (PFGE were used as genotyping methods. Sero- and phage-typing were not useful since the majority of isolates could not be subtyped by these methods. Biotyping, antibiogram and plasmid profile permitted us to classify the samples into different groups depending on the method used, and consequently were not reliable. Ribotyping and PFGE were significantly correlated with the clinical epidemiological analysis. PFGE did not type strains containing nonspecific DNase. Ribotyping was the most discriminative method for typing Brazilian isolates of E. cloacae.

  14. Interspecific interactions between Bemisia tabaci biotype B and Trialeurodes vaporariorum (Hemiptera: Aleyrodidae).

    Science.gov (United States)

    Zhang, Gui-Fen; Li, Dong-Chao; Liu, Tong-Xian; Wan, Fang-Hao; Wang, Jin-Jun

    2011-02-01

    Bemisia tabaci (Gennadius) biotype B and Trialeurodes vaporariorum (Westwood) are invasive whitefly species that often co-occur on greenhouse-grown vegetables in northern China. Although B. tabaci biotype B has been present in China for a relatively short period of time, it has become dominant over T. vaporariorum. We studied the interspecific competitive interactions between the two species in single or mixed cultures at 24 ± 1 °C, 40 ± 5% RH, and L14:D10 h photoperiod. Female longevity on tomato was not significantly different between species, but B. tabaci reproduced 4.3 to 4.9 fold more progeny. The ratio of female to male progeny in both instances was greater for B. tabaci. When cultured on tomato, cotton, and tobacco, B. tabaci developed 0.8, 3.3, and 4.7 d earlier in single culture, and 1.8, 3.9, and 4.3 d earlier in mixed culture. B. tabaci displaced T. vaporariorum in four, five and six generations when the initial ratios of B. tabaci to T. vaporariorum were 15:15, 20:10, or 10:20 on tomato. Populations of B. tabaci were 2.3 fold higher than that of T. vaporariorum on tomato plants for seven consecutive generations in single culture. B. tabaci performed better in development, survival, fecundity, and female ratio. We conclude that B. tabaci could displace T. vaporariorum in as short as four generations in a controlled greenhouse environment when they start at equal proportions. Warmer greenhouse conditions and an increase in total greenhouse area could be contributing factors in the recent dominance of B. tabaci.

  15. Comparative protection of two different commercial vaccines against Yersinia ruckeri serotype O1 and biotype 2 in rainbow trout (Oncorhynchus mykiss)

    DEFF Research Database (Denmark)

    Deshmukh, S.; Raida, M. K.; Dalsgaard, Inger;

    2012-01-01

    Differentially extended specific protection by two commercial vaccines against Yersinia ruckeri serotype O1 biotype 2 was studied following 30s immersion exposure. Rainbow trout were challenged intra-peritoneally (i.p.) with Y. ruckeri serotype O1, biotype 2 (≈106 to 107CFU/fish) at 4, 6 and 8...... months after vaccination with vaccines containing either biotype 1 (AquaVac® ERM) or both biotypes 1 and 2 (AquaVac® RELERA™). The specific pattern of vaccine-mediated protection was evaluated by relative percentage survival (RPS) analysis at 4 and 6 months post-vaccination and by obtaining gross...... pathological observations at 4 and 8 months respectively. We determined specific significant and superior protection in terms of increased survivability in AquaVac® RELERA™ vaccinated fish and observed correspondingly fewer pathological changes. The challenge trials indicated a longer protection for at least 6...

  16. Prevalence, antimicrobial resistance and genetic diversity of Yersinia enterocolitica isolated from retail frozen foods in China.

    Science.gov (United States)

    Ye, Qinghua; Wu, Qingping; Hu, Huijuan; Zhang, Jumei; Huang, Huixian

    2015-12-01

    In this study, our aim was to estimate the extent of Yersinia enterocolitica contamination in frozen foods in China and determine the bioserotype, virulotype, antimicrobial resistance, and enterobacterial repetitive intergenic consensus-PCR (ERIC-PCR) genotyping profiles of recovered Y. enterocolitica isolates. Out of 455 samples collected between July 2011 and May 2014, 56 (12.3%) tested positive for Y. enterocolitica. The 70 isolated strains were grouped into five clusters and one singleton based on their ERIC-PCR fingerprint, at a similarity coefficient of 70%. All strains were of biotype 1A, and 35.7% were of bioserotype 1A/O:8. Most strains lacked the virulence genes ail, virF, ystA, and ystC, but harbored ystB, fepD, ymoA, fes and sat. All strains were sensitive to ticarcillin but resistant to two or more antibiotics, and 48.6% of the strains were resistant to four to nine antibiotics. High resistance rates were observed for ampicillin, cephalothin, trimethoprim/sulfamethoxazole, amoxicillin/clavulanic acid, nalidixic acid and chloramphenicol (98.6%, 95.7%, 74.3%, 28.6%, 18.6% and 12.9%, respectively). This study provides a systematic surveillance of Y. enterocolitica prevalence in frozen foods in China and indicates its high antibiotic resistance, which could serve as useful information for the government to control Y. enterocolitica contamination in frozen foods and the use of antibiotics.

  17. Biotipos antimicrobianos e tipos de colicina: potenciais marcadores epidemiologicos de Salmonella agona Antimicrobial biotypes and colicine types: potential epidemiological markers of Salmonella agona

    Directory of Open Access Journals (Sweden)

    Claude André Solari

    1984-12-01

    Full Text Available Com o intuito de se obter marcadores epidemiológicos, foram analisadas 240 amostras de S. agona isoladas de diferentes fontes (humana, alimentar e ambiental oriundas de cinco Estados brasileiros (MG,SP,RJ,PE e RS. O sestudo da sensibilidade a 15 antimicrobianos e codificação numérica dos perfis de resistência propiciou o reconhecimento de 56 biotipos antimicrobianos, enquanto foram evidenciadas 40 amostras produtoras de colicina, pertencentes aos tipos: Ia (55%; B (32,5%, Ib (10% e não tipável (2,5%. A aplicação desses elementos numa diferenciação intra-sorotipo é discutida.With the purpose of characterizing epidemiologic markers, 240 strains of S. agona isolated from differents sources (man, food and environment and obtained from five Brazilian States (Minas Gerais, São Paulo, Rio de Janeiro, Pernambuco and Rio Grande do Sul were analysed. The susceptibility to 15 antimicrobial agents and numeric codification of the resistance profiles allowed us to recognize 56 antibiotic resistance biotypes, while 40 strains were able to produce colicine, belonging to the types: la (55%; B (32.5%; Ib (10% and (2.5%. the application of these elements into intra-serotype differentiation is discussed.

  18. Genome Sequence of Megasphaera cerevisiae NSB1, a Bacterium Isolated from a Canning Line and Able To Grow in Beer with High Alcohol Content

    Science.gov (United States)

    Bergsveinson, Jordyn; Thomson, Euan; Jacoby, Derek; Coady, Yvonne

    2017-01-01

    ABSTRACT The genome sequence of the brewery isolate Megasphaera cerevisiae NSB1 was determined. Strain NSB1 tolerates 5% (vol/vol) alcohol, which is higher than previously reported for M. cerevisiae. The NSB1 genome will help elucidate genetics required for alcohol tolerance and niche adaptation of this Gram-negative beer-spoilage bacterium. PMID:28232423

  19. Complete Genome Sequence of Bacillus pumilus PDSLzg-1, a Hydrocarbon-Degrading Bacterium Isolated from Oil-Contaminated Soil in China

    Science.gov (United States)

    Hao, Kun; Li, Hongna; Li, Feng

    2016-01-01

    Bacillus pumilus strain PDSLzg-1, an efficient hydrocarbon-degrading bacterium, was isolated from oil-contaminated soil. Here, we present the complete sequence of its circular chromosome and circular plasmid. The genomic information is essential for the study of degradation of oil by B. pumilus PDSLzg-1.

  20. Complete Genome Sequence of Phodopus sungorus Papillomavirus Type 1 (PsPV1), a Novel Member of the Pipapillomavirus Genus, Isolated from a Siberian Hamster.

    Science.gov (United States)

    Kocjan, Boštjan J; Hošnjak, Lea; Račnik, Joško; Zadravec, Marko; Poljak, Mario

    2014-04-10

    We report the complete genomic sequence of Phodopus sungorus papillomavirus type 1 (PsPV1), isolated from an anogenital lesion of a Siberian hamster. PsPV1 is taxonomically classified in the genus Pipapillomavirus and is most closely related to Mesocricetus auratus papillomavirus 1 (MaPV1).

  1. Isolation and identification of bovine Brucella isolates from Pakistan by biochemical tests and PCR.

    Science.gov (United States)

    Ali, Shahzad; Ali, Qurban; Melzer, Falk; Khan, Iahtasham; Akhter, Shamim; Neubauer, Heinrich; Jamal, Syed M

    2014-01-01

    Brucellosis is endemic in bovines in Pakistan. The Brucella species and biovars involved, however, are unknown. The objectives of the present study were to isolate and characterize brucellae from seropositive milk samples, aborted fetuses, and vaginal swabs of cattle and buffaloes which had recently aborted. The seropositive milk samples, aborted fetuses, and vaginal swabs of cattle and buffaloes were collected from the Potohar Plateau, Pakistan. Isolation of brucellae was done on modified Farrell's serum dextrose agar. Isolates were characterized by conventional biotyping methods, while molecular typing was done by genus (B4/B5) and species-specific (Brucella abortus, Brucella melitensis, Brucella ovis, and Brucella suis) polymerase chain reaction (PCR). A total of 30 isolates were recovered from milk (n = 5), aborted fetuses (n = 13), and vaginal swabs (n = 12). Most isolates were from cattle (56.7 %). All of them were identified as B. abortus biovar 1 based on conventional biotyping methods and genus and species-specific PCR. This preliminary study provides the first report on the prevalence of B. abortus biovar 1 in cattle and buffaloes in Pakistan.

  2. Study on the Efficacy of Some Current Herbicides for Control of Resistant and Susceptible Canarygrass (Phalaris spp. Biotypes to Acetyl CoA Carboxylase (ACCase Inhibitors

    Directory of Open Access Journals (Sweden)

    e Zand

    2011-02-01

    Full Text Available Abstract Two separate greenhouse experiments were conducted in the greenhouse facilities of the Iranian Plant Protection Research Institute, Tehran, to study the efficacy of some herbicides to control of resistant and susceptible P. minor and P. paradoxa biotypes. In each experiment, resistant and susceptible biotypes were treated separately by 19 herbicide treatments. Treatments included 10 ACCase inhibitors, 6 Acetolactate Synthase (ALS inhibitors, prosulfocarb, flamprop-M-isopropyl, isoproturon plus diflufenican and a non-sprayed control. To evaluate the effects of treatments, different characteristics including percent damage based on EWRC scores at 15 and 30 days after spraying, percentage of survived plants after spraying relative to before spraying, and percentage of dry weight and wet weight of individual plants relative to control were studied. Results showed that the susceptible biotypes of P. minor were best controlled by clodinafop propargyl and pinoxaden at 450 ml/ha while pinoxaden at 450 ml/ha and cycloxydim were best options for control of the resistant biotype. Among ALS inhibitors, iodosulfuron plus mesosulfuron could control susceptible and resistant biotypes of P. minor very effectively and semi-satisfactory, respectively. Iodosulfuron plus mesosulfuron and sulfosulfuron plus metsulfuron could remarkably reduce the wet weight of individual plants compared to control so that the plants were not damaging any more. Among other herbicides, isoproturon plus diflufenican could control the susceptible and resistant biotypes semi-satisfactory and very effectively, respectively. Keywords: Herbicide resistance, ACCase inhibitors, ALS inhibitors

  3. Stable Isotope Resolved Metabolomics Reveals the Role of Anabolic and Catabolic Processes in Glyphosate-Induced Amino Acid Accumulation in Amaranthus palmeri Biotypes.

    Science.gov (United States)

    Maroli, Amith; Nandula, Vijay; Duke, Stephen; Tharayil, Nishanth

    2016-09-21

    Biotic and abiotic stressors often result in the buildup of amino acid pools in plants, which serve as potential stress mitigators. However, the role of anabolic (de novo amino acid synthesis) versus catabolic (proteolytic) processes in contributing to free amino acid pools is less understood. Using stable isotope-resolved metabolomics (SIRM), we measured the de novo amino acid synthesis in glyphosate susceptible (S-) and resistant (R-) Amaranthus palmeri biotypes. In the S-biotype, glyphosate treatment at 0.4 kg ae/ha resulted in an increase in total amino acids, a proportional increase in both (14)N and (15)N amino acids, and a decrease in soluble proteins. This indicates a potential increase in de novo amino acid synthesis, coupled with a lower protein synthesis and a higher protein catabolism following glyphosate treatment in the S-biotype. Furthermore, the ratio of glutamine/glutamic acid (Gln/Glu) in the glyphosate-treated S- and R-biotypes indicated that the initial assimilation of inorganic nitrogen to organic forms is less affected by glyphosate. However, amino acid biosynthesis downstream of glutamine is disproportionately disrupted in the glyphosate treated S-biotype. It is thus concluded that the herbicide-induced amino acid abundance in the S-biotype is contributed by both protein catabolism and de novo synthesis of amino acids such as glutamine and asparagine.

  4. Metabolic Profiling and Enzyme Analyses Indicate a Potential Role of Antioxidant Systems in Complementing Glyphosate Resistance in an Amaranthus palmeri Biotype.

    Science.gov (United States)

    Maroli, Amith S; Nandula, Vijay K; Dayan, Franck E; Duke, Stephen O; Gerard, Patrick; Tharayil, Nishanth

    2015-10-21

    Metabolomics and biochemical assays were employed to identify physiological perturbations induced by a commercial formulation of glyphosate in susceptible (S) and resistant (R) biotypes of Amaranthus palmeri. At 8 h after treatment (HAT), compared to the respective water-treated control, cellular metabolism of both biotypes were similarly perturbed by glyphosate, resulting in abundance of most metabolites including shikimic acid, amino acids, organic acids and sugars. However, by 80 HAT the metabolite pool of glyphosate-treated R-biotype was similar to that of the control S- and R-biotypes, indicating a potential physiological recovery. Furthermore, the glyphosate-treated R-biotype had lower reactive oxygen species (ROS) damage, higher ROS scavenging activity, and higher levels of potential antioxidant compounds derived from the phenylpropanoid pathway. Thus, metabolomics, in conjunction with biochemical assays, indicate that glyphosate-induced metabolic perturbations are not limited to the shikimate pathway, and the oxidant quenching efficiency could potentially complement the glyphosate resistance in this R-biotype.

  5. Biological parameters of Bemisia tabaci (Gennadius) biotype B (Hemiptera: Aleyrodidae) on Jatropha gossypiifolia, commercial (Manihot esculenta) and wild cassava (Manihot flabellifolia and M. carthaginensis) (Euphorbiaceae).

    Science.gov (United States)

    Carabalí, Arturo; Belloti, Anthony C; Montoya-Lerma, James

    2010-01-01

    Bemisia tabaci (Gennadius) is one of the most important pests of cassava in Africa and several countries of Asia due to the damage caused by direct feeding, the excretion of honeydew, and its capacity as a vector of cassava mosaic geminivirus. There is a general consensus that B. tabaci is a complex of morphologically indistinguishable populations with different biotypes. In the Americas, the polyphagous biotype B does not appear to feed on cassava. Recent studies indicate that it is possible, however, for biotype B to gradually adapt to cassava using phylogenetically related hosts. Therefore, the possibility that some wild species of cassava constitute intermediate hosts in the adaptation process may lead to the establishment of biotype B on commercial varieties of Manihot esculenta. In here, we evaluated Jatropha gossypiifolia, two wild species of cassava (Manihot flabellifolia and M. carthaginensis) and a commercial cassava variety (MCol 2063) as hosts of biotype B. The highest oviposition rate (2.7 eggs /two days) occurred on M. esculenta, although the development time (44 d) was the longest when compared to M. carthaginensis and J. gossypiifolia. About 60% of the population could reproduce on the wild cassava species vs. 55% on J. gossypiifolia and 27.5% on the commercial variety. Our data suggest that J. gossypiifolia is a suitable host and the wild species M. carthaginensis can constitute a potential intermediate host in the adaptation of biotype B to commercial varieties of cassava.

  6. Occurrence of Campylobacter jejuni and Campylobacter coli and their biotypes in beef and dairy cattle from the south of Chile Ocorrência de Campylobacter jejuni e Campylobacter coli e seus biotipos em bovinos de corte e de leite no sul do Chile

    Directory of Open Access Journals (Sweden)

    Heriberto Fernández

    2009-09-01

    Full Text Available The prevalence of Campylobacter jejuni and Campylobacter coli and their biotypes in beef and dairy cattle from the South of Chile was established. Campylobacter were statistically more prevalent among beef cattle (35.9% than among dairy cattle (21.3%, being C. jejuni the species most frequently isolated.Foi estabelecida a prevalência de Campylobacter jejuni e Campylobacter coli e seus biotipos, em bovinos de corte e de leite do sul do Chile. Campylobacter foi estatisticamente mais prevalente nos bovinos de corte (35,9% do que nos bovinos de leite (21,3%, sendo C. jejuni a espécie mais frequentemente isolada.

  7. Isolation and characterization of new onionins A2 and A3 from Allium cepa, and of onionins A1, A2, and A3 from Allium fistulosum.

    Science.gov (United States)

    Nohara, Toshihiro; Fujiwara, Yukio; Kudo, Rino; Yamaguchi, Koki; Ikeda, Tsuyoshi; Murakami, Kotaro; Ono, Masateru; Kajimoto, Tetsuya; Takeya, Motohiro

    2014-01-01

    In this study, the new stable sulfur-containing compounds onionins A2 (1) and A3 (2) were isolated from the acetone extracts of the bulbs of Allium cepa L. and identified as the stereoisomers of onionin A1 discovered in our previous study. Their chemical structures, 3,4-dimethyl-5-(1E-propenyl)-tetrahydrothiophene-2-sulfenic acid-S-oxides, were characterized using various spectroscopic techniques. In addition, 1 and 2 together with onionin A1 were successfully isolated from the leaves of the Welsh onion, Allium fistulosum L. The onion-extracted fractions showed good potential to inhibit the polarization of M2 activated macrophages, indicating their possible ability to inhibit tumor cell proliferation.

  8. Biochemical Characterization of CPS-1, a Subclass B3 Metallo-β-Lactamase from a Chryseobacterium piscium Soil Isolate

    DEFF Research Database (Denmark)

    Gudeta, Dereje Dadi; Pollini, Simona; Docquier, Jean-Denis;

    2016-01-01

    CPS-1 is a subclass B3 metallo-β-lactamase from a Chryseobacterium piscium isolated from soil, showing 68 % amino acid identity to GOB-1 enzyme. CPS-1 was overproduced in Escherichia coli Rosetta (DE3), purified by chromatography and biochemically characterized. This enzyme exhibits a broad spect...... spectrum substrate profile including penicillins, cephalosporins and carbapenems, which overall resembles those of L1, GOB-1 and acquired subclass B3 enzymes AIM-1 and SMB-1.......CPS-1 is a subclass B3 metallo-β-lactamase from a Chryseobacterium piscium isolated from soil, showing 68 % amino acid identity to GOB-1 enzyme. CPS-1 was overproduced in Escherichia coli Rosetta (DE3), purified by chromatography and biochemically characterized. This enzyme exhibits a broad...

  9. Effects of host plants on insecticide susceptibility and carboxylesterase activity in Bemisia tabaci biotype B and greenhouse whitefly, Trialeurodes vaporariorum.

    Science.gov (United States)

    Liang, Pei; Cui, Jian-Zhou; Yang, Xiu-Qing; Gao, Xi-Wu

    2007-04-01

    Bemisia tabaci (Gennadius) biotype B and the greenhouse whitefly, Trialeurodes vaporariorum (Westwood), have become serious pests of cotton and vegetable crops in China since the early 1990s. In recent years, however, B. tabaci have broken out more frequently and widely than have T. vaporariorum. The B. tabaci biotype B has also developed higher resistance to several insecticides. Here, the effects of four different host plants on the insecticide susceptibility of B. tabaci biotype B and T. vaporariorum have been compared. The LC(50) values of imidacloprid, abamectin, deltamethrin and omethoate in T. vaporariorum reared on cucumber were significantly higher than those in B. tabaci (the LC(50) values in T. vaporariorum were respectively 3.13, 2.63, 2.78 and 6.67 times higher than those in B. tabaci). On the other hand, the B. tabaci population reared on cotton was more tolerant to all four insecticides tested than the T. vaporariorum population from the same host, especially to abamectin (up to 8.4-fold). The effects of the four host plants on the activity of carboxylesterase (CarE) in B. tabaci biotype B and T. vaporariorum were also compared. The results showed that, although the CarE activity of B. tabaci and T. vaporariorum varied depending on the host plants, the B. tabaci population possessed significantly higher CarE activity than the T. vaporariorum population reared on the same host plant. This was especially so on cucumber and cotton, where the CarE activities of the B. tabaci population were over 1.6 times higher than those of T. varporariorum. The frequency profiles for this activity in B. tabaci and T. vaporariorum populations reared on same host plant were apparently different.

  10. Microbiological and molecular characterization of Corynebacterium diphtheriae isolated in Algeria between 1992 and 2015.

    Science.gov (United States)

    Benamrouche, N; Hasnaoui, S; Badell, E; Guettou, B; Lazri, M; Guiso, N; Rahal, K

    2016-12-01

    The objectives of this study were to undertake the microbiological and molecular characterization of Corynebacterium diphtheriae isolates collected in Algeria during epidemic and post-epidemic periods between 1992 and 2015. Microbiological characterization includes the determination of biotype and toxigenicity status using phenotypic and genotypic methods. Antimicrobial susceptibility was determined by the E-test method. Molecular characterization was performed by multi-locus sequence typing. In total, there were 157 cases of C. diphtheriae isolates, 127 in patients with respiratory diphtheria and 30 with ozena. Isolates with a mitis biotype were predominant (122 out of 157; 77.7%) followed by belfanti (28 out of 157; 17.8%) and gravis biotype (seven out of 157; 4.5%). Toxigenic isolates were predominant in the period 1992-2006 (74 out of 134) whereas in the period 2007-2015, only non-toxigenic isolates circulated (23 out of 23). All 157 isolates were susceptible to erythromycin, gentamicin, vancomycin and cotrimoxazole. Reduced susceptibility to penicillin G, cefotaxime, tetracycline and chloramphenicol was detected in 90 (57.3%), 88 (56.1%), 112 (71.3%) and 90 (57.3%) isolates, respectively. Multi-locus sequence typing analysis indicates that sequence type 116 (ST-116) was the most frequent, with 65 out of 100 isolates analysed, in particular during the epidemic period 1992-1999 (57 out of 65 isolates). In the post-epidemic period, 2000-2015, 13 different sequence types were isolated. All belfanti isolates (ten out of 100 isolates) belonged to closely related sequence types grouped in a phylogenetically distinct eBurst group and were collected exclusively in ozena cases. In conclusion, the epidemic period was associated with ST-116 while the post-epidemic period was characterized by more diversity. Belfanti isolates are grouped in a phylogenetically distinct clonal complex.

  11. Characterization of Escherichia coli isolated from calf diarrhea in and around Kombolcha, South Wollo, Amhara Region, Ethiopia.

    Science.gov (United States)

    Gebregiorgis, Ashenafi; Tessema, Tesfaye Sisay

    2016-02-01

    This study was carried out from October 2012 to end of February 2013 in and around Kombolcha, Amhara regional state, Ethiopia, using a total of 201 neonatal calves aged 1 day to 4 months and suffering from diarrhea. The objectives of the study were to isolate Escherichia coli from diarrheic calves, and to determine E. coli biotypes and risk factors associated with its isolation. The fecal samples were collected, transported, and processed following standard microbiological procedures. Seventy-four isolates of E. coli were identified. Yellowish diarrhea, younger age, and low-colostrum feeding were significantly associated with rate of E. coli isolation (P calf diarrhea, with very diverse biotypes.

  12. Development and reproduction of ‘B' biotype Bemisia tabaci (Gennadius) (Homoptera: Aleyrodidae) on four ornamentals

    Institute of Scientific and Technical Information of China (English)

    LILIN; SHUN-XIANGREN

    2005-01-01

    Effects of four commercial ornamentals on the development, survivorship and reproduction of the whitefly B biotype Bemisia tabaci (Gennadius) were studied in the laboratory (temperature 26 ±1℃; relative humidity 75%-90%; L: D 14:10). The total survivorship from egg to adult on hibiscus (Hibiscus rosa-sinensis L.), poinsettia (Euphorbia pulcherrima Will), cottonrose hibiscus (Hibiscus mutabilis L.) and variegated leafcroton (Codiaeum variegatum ‘Aucubaefolium') were 33.69%, 40.55%, 79.11%, and 29.39%,respectively. The developmental periods from egg to adult varied from 23.12 days on cottonrose hibiscus to 32.13 days on hibiscus. The average longevity of adult females ranged from 6.87 days on variegated leafcroton to 21.07 days on poinsettia. The average numbers of eggs laid per female were 9.20, 25.13, 54.45, and 26.79 on the above respective hosts. The intrinsic rates of natural increase (rm) for B biotype B. tabaci on cottonrose hibiscus was the highest. Based on life table analyses of whitefly populations, cottonrose hibiscus was the most suitable host for B biotype B. tabaci in this study.

  13. Phospholipase, proteinase and haemolytic activities of Candida albicans isolated from oral cavities of patients with type 2 diabetes mellitus.

    Science.gov (United States)

    Tsang, C S P; Chu, F C S; Leung, W K; Jin, L J; Samaranayake, L P; Siu, S C

    2007-10-01

    The aim of this study was to biotype and characterize phospholipase, proteinase and haemolytic activities of oral Candida albicans isolates from 210 Chinese patients with type 2 diabetes mellitus (DM) and 210 age- and sex-matched healthy controls. Seventy-six and 50 C. albicans isolates were obtained from type 2 DM patients and controls, respectively, using the oral rinse technique. The isolates were characterized with a biotyping system based on enzyme profiles, carbohydrate assimilation patterns and boric acid resistance of the yeasts, and the isolates were further tested for in vitro phospholipase, proteinase and haemolytic activities. The major biotypes of C. albicans isolates from the type 2 DM and control groups were A1R (42.1 %) and J1R (36.0 %), respectively. Significantly higher proteinase and haemolytic activities were found in the isolates from the type 2 DM group (P or =10 years of DM history than those with DM patients than in those from male counterparts (PCandida isolates taken from DM patients.

  14. A Synthetic Butenolide Diterpene is now a Natural Product Isolated from Metaporana sericosepala, a Plant from the Madagascar Dry Forest[1a

    Science.gov (United States)

    Presley, Christopher C.; Rakotondraibe, L. Harinantenaina; Brodie, Peggy J.; Callmander, Martin W.; Randrianaivo, Richard; Rasamison, Vincent E.; Rakotobe, Etienne; Kingston, David G. I.

    2015-01-01

    Antiproliferative bioassay-guided fractionation of the ethanolic extract of the endemic Madagascan plant Metaporana sericosepala led to the first natural product isolation of a butenolide diterpene which was synthesized during an anti-inflammatory study in 1988. The structure of the compound was elucidated as 3-homofarnesyl-4-hydroxybutenolide (1) by analysis of its spectroscopic data, including 1D- and 2D-NMR data and chemical evidence. The once synthetic compound can now also be considered as a natural product. Compound 1 had modest antiproliferative activity towards the A2780 ovarian cancer cell line with an IC50 value of 8 μM. PMID:26435765

  15. Isolation and Characterization of Plantaricin Produced by Lactobacillus plantarum Strains (IIA-1A5, IIA-1B1, IIA-2B2

    Directory of Open Access Journals (Sweden)

    I. I. Arief

    2013-08-01

    Full Text Available Bacteriocins produced by Indonesian lactic acid bacteria Lactobacillus plantarum IIA-1A5, IIA-1B1, IIA-2B2 were purified and characterized. Plantaricin W gene had been successfully amplified from all strains. This amplicon showed the expected 200 bp size of plantaricin W gene. This bacteriocins purified from L. plantarum IIA-1A5, IIA-1B1, and IIA-2B2 were named plantaricin IIA-1A5, IIA-1B1, and IIA-2B2. Purification by cation exchange chromatography increased the purity (fold and activity of plantaricins. Purity of plantaricin IIA-1A5 was increased by 3.13 fold with specific activity 13.40 AU/mg. Plantaricin IIA-1B1 had 2.98 fold purity with specific activity 5.12 AU/mg, while purity of plantaricin IIA-2B2 was 1.37 fold with specific activity 7.70 AU/mg. All plantaricins could inhibit the growth of pathogenic bacteria, such as Escherichia coli, Salmonella typhimurium, Bacillus cereus, and Staphylococcus aureus. Plantaricins could be digested by trypsin. Stability of plantaricins at 80 oC for 30 min and at 121 oC for 15 min were affected by type of plantaricin and species of pathogenic bacteria. Generally, plantaricin IIA-1A5 was better as antimicrobial agent than plantaricin IIA-1B1 and plantaricin IIA-2B2.

  16. Bioserotypes and virulence markers of Yersinia enterocolitica strains isolated from mallards (Anas platyrhynchos) and Pheasants (Phasianus colchicus).

    Science.gov (United States)

    Bancerz-Kisiel, Agata; Szczerba-Turek, Anna; Lipczyńska, Karolina; Stenzel, Tomasz; Szweda, Wojciech

    2012-12-01

    Yersinia enterocolitica is the causative agent of yersiniosis in different animal species and in humans. Food contaminated with Y. enterocolitica is the main source of infection for humans, and swine plays a major role in the transmission of the disease. There are a limited number of reports of the prevalence of Y. enterocolitica in wild animals and birds. This study characterized virulence markers associated with Y. enterocolitica isolates recovered from mallards and pheasants. Y. enterocolitica strains were isolated from 5 (11.11%) of 45 mallards originating from a cold culture (peptone, sorbitol, and bile salts medium) belonging to biotype 1A. Serotyping showed that three of these five serotypes represented serotype O:8, one belonged to serotype O:5, and one did not agglutinate with any of the sera and was classified as nonidentified. Molecular analysis for virulence markers detected the ystB gene, which encodes an enterotoxin, in five isolates. Y. enterocolitica was not detected in any of the 16 examined pheasants.

  17. The Lake Chad Basin, an Isolated and Persistent Reservoir of Vibrio cholerae O1: A Genomic Insight into the Outbreak in Cameroon, 2010

    DEFF Research Database (Denmark)

    Kaas, Rolf Sommer; Ngandjio, Antoinette; Nzouankeu, Ariane

    2016-01-01

    The prevalence of reported cholera was relatively low around the Lake Chad basin until 1991. Since then, cholera outbreaks have been reported every couple of years. The objective of this study was to investigate the 2010/2011 Vibrio cholerae outbreak in Cameroon to gain insight into the genomic...... make-up of the V. cholerae strains responsible for the outbreak. Twenty-four strains were isolated and whole genome sequenced. Known virulence genes, resistance genes and integrating conjugative element (ICE) elements were identified and annotated. A global phylogeny (378 genomes) was inferred using...... a single nucleotide polymorphism (SNP) analysis. The Cameroon outbreak was found to be clonal and clustered distant from the other African strains. In addition, a subset of the strains contained a deletion that was found in the ICE element causing less resistance. These results suggest that V. cholerae...

  18. The Lake Chad Basin, an Isolated and Persistent Reservoir of Vibrio cholerae O1: A Genomic Insight into the Outbreak in Cameroon, 2010

    Science.gov (United States)

    Kaas, Rolf S.; Ngandjio, Antoinette; Nzouankeu, Ariane; Siriphap, Achiraya; Fonkoua, Marie-Christine; Aarestrup, Frank M.; Hendriksen, Rene S.

    2016-01-01

    The prevalence of reported cholera was relatively low around the Lake Chad basin until 1991. Since then, cholera outbreaks have been reported every couple of years. The objective of this study was to investigate the 2010/2011 Vibrio cholerae outbreak in Cameroon to gain insight into the genomic make-up of the V. cholerae strains responsible for the outbreak. Twenty-four strains were isolated and whole genome sequenced. Known virulence genes, resistance genes and integrating conjugative element (ICE) elements were identified and annotated. A global phylogeny (378 genomes) was inferred using a single nucleotide polymorphism (SNP) analysis. The Cameroon outbreak was found to be clonal and clustered distant from the other African strains. In addition, a subset of the strains contained a deletion that was found in the ICE element causing less resistance. These results suggest that V. cholerae is endemic in the Lake Chad basin and different from other African strains. PMID:27191718

  19. Genetic and biochemical diversity of Gardnerella vaginalis strains isolated from women with bacterial vaginosis.

    Science.gov (United States)

    Pleckaityte, Milda; Janulaitiene, Migle; Lasickiene, Rita; Zvirbliene, Aurelija

    2012-06-01

    Gardnerella vaginalis is considered a substantial player in the progression of bacterial vaginosis (BV). We analysed 17 G. vaginalis strains isolated from the genital tract of women diagnosed with BV to establish a potential link between genotypes/biotypes and the expression of virulence factors, vaginolysin (VLY) and sialidase, which are assumed to play a substantial role in the pathogenesis of BV. Amplified ribosomal DNA restriction analysis revealed two G. vaginalis genotypes. Gardnerella vaginalis isolates of genotype 2 appeared more complex than genotype 1 and were subdivided into three subtypes. Biochemical typing allowed us to distinguish four different biotypes. A great diversity of the level of VLY production among the isolates of G. vaginalis may be related to a different cytotoxicity level of the strains. We did not find any correlation between VLY production level and G. vaginalis genotype/biotype. In contrast, a link between G. vaginalis genotype and sialidase production was established. Our findings on the diversity of VLY expression level in different clinical isolates and linking sialidase activity with the genotype of G. vaginalis could help to evaluate the pathogenic potential of different G. vaginalis strains.

  20. Inheritance patterns of secondary symbionts during sexual reproduction of pea aphid biotypes.

    Science.gov (United States)

    Peccoud, Jean; Bonhomme, Joël; Mahéo, Frédérique; de la Huerta, Manon; Cosson, Olivier; Simon, Jean-Christophe

    2014-06-01

    Herbivorous insects frequently harbor bacterial symbionts that affect their ecology and evolution. Aphids host the obligatory endosymbiont Buchnera, which is required for reproduction, together with facultative symbionts whose frequencies vary across aphid populations. These maternally transmitted secondary symbionts have been particularly studied in the pea aphid, Acyrthosiphon pisum, which harbors at least 8 distinct bacterial species (not counting Buchnera) having environmentally dependent effects on host fitness. In particular, these symbiont species are associated with pea aphid populations feeding on specific plants. Although they are maternally inherited, these bacteria are occasionally transferred across insect lineages. One mechanism of such nonmaternal transfer is paternal transmission to the progeny during sexual reproduction. To date, transmission of secondary symbionts during sexual reproduction of aphids has been investigated in only a handful of aphid lineages and 3 symbiont species. To better characterize this process, we investigated inheritance patterns of 7 symbiont species during sexual reproduction of pea aphids through a crossing experiment involving 49 clones belonging to 9 host-specialized biotypes, and 117 crosses. Symbiont species in the progeny were detected with diagnostic qualitative PCR at the fundatrix stage hatching from eggs and in later parthenogenetic generations. We found no confirmed case of paternal transmission of symbionts to the progeny, and we observed that maternal transmission of a particular symbiont species (Serratia symbiotica) was quite inefficient. We discuss these observations in respect to the ecology of the pea aphid.

  1. EPSPS variability, gene expression, and enzymatic activity in glyphosate-resistant biotypes of Digitaria insularis.

    Science.gov (United States)

    Galeano, E; Barroso, A A M; Vasconcelos, T S; López-Rubio, A; Albrecht, A J P; Victoria Filho, R; Carrer, H

    2016-08-12

    Weed resistance to herbicides is a natural phenomenon that exerts selection on individuals in a population. In Brazil, glyphosate resistance was recently detected in Digitaria insularis. The objective of this study was to elucidate mechanisms of weed resistance in this plant, including genetic variability, allelism, amino acid substitutions, gene expression, and enzymatic activity levels. Most of these have not previously been studied in this species. D. insularis DNA sequences were used to analyze genetic variability. cDNA from resistant and susceptible plants was used to identify mutations, alleles, and 5-enolpyruvylshikimate-3-phosphate synthase (EPSPS) expression, using real-time quantitative reverse transcription-polymerase chain reaction. In addition, EPSPS activity was measured. We found a decrease in genetic variability between populations related to glyphosate application. Substitutions from proline to threonine and tyrosine to cysteine led to a decrease in EPSPS affinity for the glyphosate. In addition, the EPSPS enzymatic activity was slightly higher in resistant plants, whereas EPSPS gene expression was almost identical in both biotypes, suggesting feedback regulation at different levels. To conclude, our results suggest new molecular mechanisms used by D. insularis to increase glyphosate resistance.

  2. Development of Bemisia tabaci (Gennadius,1889 biotype B on Lycopersicon spp. genotypes

    Directory of Open Access Journals (Sweden)

    Marilene Fancelli

    2002-01-01

    Full Text Available Whiteflies are phytophagous insects, whose nymphs and adults suck the phloem sap, causing direct damage due to host plant weakness. In tomato (Lycopersicon spp. crops, they are important vectors of limiting fitoviruses. The objective of this study was to determine the effects of Lycopersicon spp. genotypes on Bemisia tabaci (Gennadius, 1889 biotype B development under greenhouse conditions. The evaluated genotypes were LA462 (L. peruvianum, LA716 (L. pennellii, LA1584 (L. pimpinellifolium, LA1609 (L. peruvianum, LA1739 (L. hirsutum, P25 (L. esculentum, PI134417 (L. hirsutum f. glabratum and Santa Clara (L. esculentum. LA716 was non-preferred for oviposition by the whitefly, which suggests an antixenotic effect. LA1584 showed an antibiotic resistance because nymphal survival was reduced and nymphal developmental time was increased. Antixenotic resistance was observed in LA1739 and PI134417, based on a reduction of oviposition. PI134417 also reduced nymphal survival, which suggests an antibiotic effect, but LA1739 was suitable for insect development. LA1609 was highly preferred for oviposition, however it reduced insect survival. P25 and Santa Clara (L. esculentum were highly preferred for oviposition.

  3. Isolation of a cDNA encoding thymic shared antigen-1. A new member of the Ly6 family with a possible role in T cell development.

    Science.gov (United States)

    MacNeil, I; Kennedy, J; Godfrey, D I; Jenkins, N A; Masciantonio, M; Mineo, C; Gilbert, D J; Copeland, N G; Boyd, R L; Zlotnik, A

    1993-12-15

    We have previously characterized a novel mouse thymocyte marker, defined as thymic shared Ag-1 (TSA-1), present on both immature thymocytes and a subset of thymic medullary epithelial cells. MTS 35, a mAb specific for TSA-1, alters T cell differentiation when added to fetal thymic organ cultures, suggesting TSA-1 may be important for T cell development in the thymus. In this study, we describe the isolation of a cDNA encoding TSA-1 using transient expression of COS-7 cells and selection with MTS 35. The predicted amino acid sequence of this cDNA encodes a 15 to 17-kDa protein and the expressed protein is linked to the membrane via a phosphatidylinositol moiety. TSA-1 is transcriptionally active at various levels in all organs examined, suggesting that its role is not solely intrathymic. TSA-1 shares amino acid sequence homology to the mouse Ly6 multigene family, epidermal growth factor-like receptors, and to cobra venom neurotoxin. The Tsa-1 locus is located on chromosome 15 linked to Ly6 on the mouse genome. We also examined the effects of MTS 35 in fetal thymic organ cultures repopulated with two subsets of thymocytes representing defined stages of T cell development. Our results suggest that TSA-1 may play a role during positive selection and the transition from CD4+CD8+ thymocytes to the mature CD4+CD8- and CD4-CD8+ subsets.

  4. Characterization of VCC-1, a Novel Ambler Class A Carbapenemase from Vibrio cholerae Isolated from Imported Retail Shrimp Sold in Canada.

    Science.gov (United States)

    Mangat, Chand S; Boyd, David; Janecko, Nicol; Martz, Sarah-Lynn; Desruisseau, Andrea; Carpenter, Michael; Reid-Smith, Richard J; Mulvey, Michael R

    2016-01-11

    One of the core goals of the Canadian Integrated Program for Antimicrobial Resistance Surveillance (CIPARS) is to monitor major meat commodities for antimicrobial resistance. Targeted studies with methodologies based on core surveillance protocols are used to examine other foods, e.g., seafood, for antimicrobial resistance to detect resistances of concern to public health. Here we report the discovery of a novel Ambler class A carbapenemase that was identified in a nontoxigenic strain of Vibrio cholerae (N14-02106) isolated from shrimp that was sold for human consumption in Canada. V. cholerae N14-02106 was resistant to penicillins, carbapenems, and monobactam antibiotics; however, PCR did not detect common β-lactamases. Bioinformatic analysis of the whole-genome sequence of V. cholerae N14-02106 revealed on the large chromosome a novel carbapenemase (referred to here as VCC-1, for Vibrio cholerae carbapenemase 1) with sequence similarity to class A enzymes. Two copies of blaVCC-1 separated and flanked by ISVch9 (i.e., 3 copies of ISVch9) were found in an acquired 8.5-kb region inserted into a VrgG family protein gene. Cloned blaVCC-1 conferred a β-lactam resistance profile similar to that in V. cholerae N14-02106 when it was transformed into a susceptible laboratory strain of Escherichia coli. Purified VCC-1 was found to hydrolyze penicillins, 1st-generation cephalosporins, aztreonam, and carbapenems, whereas 2nd- and 3rd-generation cephalosporins were poor substrates. Using nitrocefin as a reporter substrate, VCC-1 was moderately inhibited by clavulanic acid and tazobactam but not EDTA. In this report, we present the discovery of a novel class A carbapenemase from the food supply.

  5. Characterization of Vibrio cholerae Strains Isolated from the Nigerian Cholera Outbreak in 2010.

    Science.gov (United States)

    Dupke, Susann; Akinsinde, Kehinde A; Grunow, Roland; Iwalokun, Bamidele A; Olukoya, Daniel K; Oluwadun, Afolabi; Velavan, Thirumalaisamy P; Jacob, Daniela

    2016-10-01

    We examined clinical samples from Nigerian patients with acute watery diarrhea for Vibrio cholerae during the 2010 cholera outbreak. A total of 109 suspected isolates were characterized, but only 57 V. cholerae strains could be confirmed using multiplex real-time PCR as well as rpoB sequencing and typed as V. cholerae O:1 Ogawa biotype El Tor. This finding highlighted the need for accurate diagnosis of cholera in epidemic countries to implement life-saving interventions.

  6. Herbicidas alternativos para controle de biótipos de Conyza bonariensis e C. canadensis resistentes ao glyphosate Alternative herbicides to control glyphosate-resistant biotypes of Conyza bonariensis and C. canadensis

    Directory of Open Access Journals (Sweden)

    M.S. Moreira

    2010-01-01

    stages. Three trials were developed under field conditions: in citrus orchards under formation, in plants with phenological stages of ten leaves and at pre-flowering. For plants at the ten leaf stage, satisfactory control was reached with applications of glyphosate + bromacil + diuron (1,440 + 1,200 + 1,200 g ha-1, glyphosate + atrazine (1,440 + 1,500 g ha-1 and glyphosate + diuron (1,440 + 1,500 g ha-1. For Conyza spp. plants at the pre-flowering stage, ammonium-glufosinate application, at the rate of 400 g ha-1, isolated or associated to MSMA, bromacil+diuron, metsulfuron, carfentrazone and paraquat, was a viable alternative to control glyphosate-resistant biotypes.

  7. Gene expression profiling in the thiamethoxam resistant and susceptible B-biotype sweetpotato whitefly, Bemisia tabaci.

    Science.gov (United States)

    Xie, Wen; Yang, Xin; Wang, Shao-Ii; Wu, Qing-jun; Yang, Ni-na; Li, Ru-mei; Jiao, Xiao-guo; Pan, Hui-peng; Liu, Bai-ming; Feng, Yun-tao; Xu, Bao-yun; Zhou, Xu-guo; Zhang, You-jun

    2012-01-01

    Thiamethoxam has been used as a major insecticide to control the B-biotype sweetpotato whitefly, Bemisia tabaci (Gennadius) (Hemiptera: Aleyrodidae). Due to its excessive use, a high level of resistance to thiamethoxam has developed worldwide over the past several years. To better understand the molecular mechanisms underlying this resistance in B. tabaci, gene profiles between the thiamethoxam-resistant and thiamethoxam-susceptible strains were investigated using the suppression subtractive hybridization (SSH) library approach. A total of 72 and 52 upand down-regulated genes were obtained from the forward and reverse SSH libraries, respectively. These expressed sequence tags (ESTs) belong to several functional categories based on their gene ontology annotation. Some categories such as cell communication, response to abiotic stimulus, lipid particle, and nuclear envelope were identified only in the forward library of thiamethoxam-resistant strains. In contrast, categories such as behavior, cell proliferation, nutrient reservoir activity, sequence-specific DNA binding transcription factor activity, and signal transducer activity were identified solely in the reverse library. To study the validity of the SSH method, 16 differentially expressed genes from both forward and reverse SSH libraries were selected randomly for further analyses using quantitative realtime PCR (qRT-PCR). The qRT-PCR results were fairly consistent with the SSH results; however, only 50% of the genes showed significantly different expression profiles between the thiamethoxam-resistant and thiamethoxam-susceptible whiteflies. Among these genes, a putative NAD-dependent methanol dehydrogenase was substantially over-expressed in the thiamethoxamresistant adults compared to their susceptible counterparts. The distributed profiles show that it was highly expressed during the egg stage, and was most abundant in the abdomen of adult females.

  8. First report and differential colonization of Passiflora species by the B biotype of Bemisia tabaci (Gennadius) (Hemiptera: Aleyrodidae) in Brazil

    Energy Technology Data Exchange (ETDEWEB)

    Nunes, Endson S.; Vieira, Maria L.C. [Escola Superior de Agricultura Luiz de Queiroz (ESALQ-USP), Piracicaba, SP (Brazil). Dept. de Genetica]. E-mail: esnunes@carpa.ciagri.usp.br; mlcvieir@esalq.usp.br; Brown, Judith K. [University of Arizona, Tucson, AZ (United States). Dept. of Plant Sciences]. E-mail: jbrown@Ag.arizona.edu; Moreira, Adriana G.; Rezende, Jorge A.M. [Escola Superior de Agricultura Luiz de Queiroz (ESALQ-USP), Piracicaba, SP (Brazil). Dept. de Entomologia, Fitopatologia e Zoologia Agricola]. E-mails: agmoreir@esalq.usp.br; amrezen@esalq.usp.br; Watson, Gillian [California Dept. of Food and Agriculture, Sacramento, CA (United States)]. E-mail: gwatson@cdfa.ca.gov; Lourencao, Andre L. [Instituto Agronomico, Campinas, SP (Brazil). Centro de Pesquisa e Desenvolvimento de Fitossanidade]. E-mail: andre@iac.sp.gov.br; Piedade, Sonia M.S. [Escola Superior de Agricultura Luiz de Queiroz (ESALQ-USP), Piracicaba, SP (Brazil). Dept. de Ciencias Exatas]. E-mail: jsoniamsp@esalq.usp.br

    2008-11-15

    This note is the first report of Bemisia tabaci (Gennadius) biotype B colonizing passionvine in Brazil. We examined the colonization of nine Passiflora species by a wild B type population under greenhouse conditions. P. amethystina Mikan was the most preferred species for oviposition and colonization, whereas P. suberosa L., P. coriacea Juss. and two commercially cultivated species, P. alata Curtis and P. edulis Sims f. flavicarpa Degener, were mostly uncolonised. P. morifolia Mast., P. cincinnata Mast., P. foetida L. and P. caerulea L. showed intermediate levels of colonization. Such differential colonization might suggest some degree of resistance by certain Passiflora species or oviposition preference by B. tabaci. (author)

  9. Occurrence of Eretmocerus mundus Mercet (Hymenoptera: Aphelinidae parasitizing Bemisia tabaci (Genn. biotype B (Hemiptera: Aleyrodidae in Brazil

    Directory of Open Access Journals (Sweden)

    André Luiz Lourenção

    2014-06-01

    Full Text Available The parasitism of Bemisia tabaci (Genn. biotype B nymphs on cotton plants was observed during a research on resistance of cotton genotypes to this whitefly. The experiment was set in a greenhouse at the Experimental Station of the Instituto Agronômico (IAC, in Campinas, São Paulo State, Brazil. Samples of the parasitized nymphs were collected and maintained in laboratory to monitor the parasitism and obtain the adult parasitoids. A total of 129 adult parasitoids were obtained, including one Encarsia inaron (Walker, 13 En. lutea (Masi, and 115 Eretmocerus mundus Mercet (Hymenoptera: Aphelinidae. This is the first report of Er. mundus in Brazil.

  10. Only the B biotype of Bemisia tabaci is present on vegetables in São Paulo State, Brazil

    OpenAIRE

    Rocha, Kelly Cristina Gonçales [UNESP; Marubayashi,Julio Massaharu; Navas-Castillo, Jesús; Yuki, Valdir Atsushi; Wilcken, Carlos Frederico [UNESP; Pavan,Marcelo Agenor; Krause-Sakate, Renate

    2011-01-01

    Bemisia tabaci (Genn.) is one of the most important pests in cultivated areas of vegetables and ornamental crops around the world. Based on the mitochondrial cytochrome oxidize I (mtCOI) sequence, there is evidence that B. tabaci should be considered a cryptic species complex of 11 groups containing 24 species. Two of the groups, Middle East-Asia Minor 1 and Mediterranean include biotypes B and Q, respectively. In this study we evaluated the mtCOI sequence of B. tabaci populations collected i...

  11. Significance of buccopalatal implant position, biotype, platform switching, and pre-implant bone augmentation on the level of the midbuccal mucosa.

    Science.gov (United States)

    Zuiderveld, Elise G; den Hartog, Laurens; Vissink, Arjan; Raghoebar, Gerry M; Meijer, Henny J A

    2014-01-01

    This study assessed whether buccopalatal implant position, biotype, platform switching, and pre-implant bone augmentation affects the level of the midbuccal mucosa (MBM). Ninety patients with a single-tooth implant in the esthetic zone were included. The level of the MBM was measured on photographs taken 1 year after crown placement. The factors analyzed only explained 22% of the level of the MBM. The more an implant was placed to the buccal, the more the MBM was positioned apically. A comparable phenomenon was observed in cases with a thick biotype and cases that underwent pre-implant bone augmentation. Platform switching did not affect the level of the MBM.

  12. The hydrolytic enzymes produced by fungi strains isolated from the sand and soil of recreational areas

    Science.gov (United States)

    Kurnatowski, Piotr; Wójcik, Anna; Błaszkowska, Joanna; Góralska, Katarzyna

    2016-10-01

    The pathogenicity of fungi depends on, inter alia, the secretion of hydrolytic enzymes. The aim of this study was to determine the enzymatic activity of yeasts and yeast-like fungi isolated from children’s recreation areas, and compare the results with literature data of strains obtained from patients with mycoses. The enzymatic activity of 96 strains was assessed using an API ZYM kit (bioMerieux, France) and their biotypes were established. The fungal species were found to produce from 16 to 19 hydrolases: the most active were: leucine arylamidase (e5), acid phosphatase (e10), alkaline phosphatase (e1), naphthol-AS-BI-phosphohydrolase (e11), esterase – C4 (e2), β-galac - tosidase (e13) and β-glucosidase (e16). In addition, 13 biotypes characteristic of particular species of fungi were defined. Most strains could be categorized as biotypes C2 – 39.5% and A – 26%. The examined fungal strains isolated from recreational areas have selected biochemical characteristics i.e. production of hydrolases, which demonstrate their pathogenicity. They produce a number of enzymes which are also present in strains isolated from patients with mycoses, including: leucine arylamidase (e5), acid phosphatase (e10), naphthol-AS-BI-phosphohydrolase (e11) and alkaline phosphatase (e1). The biotypes identified in the course of this study (A, B3, B4, C1, C6 and D3) have been also reported in cases of fungal infection. Therefore, the fungi present in the sand and soil of recreational have pathogenic properties and are possible factors of fungal infection among children.

  13. Biotipagem e resistotipagem para o traçado epidemiológico da origem fecal de Klebsiella pneumoniae em infecções urinárias Biotyping and resistotyping for epidemiological tracing of the fecal origin of Klebsiella pneumoniae in urinary infections

    Directory of Open Access Journals (Sweden)

    José Augusto Adler Pereira

    1985-09-01

    there correlation with simultaneous biotyping identity. Simultaneous occurrence of identical biotypes or resistotypes in faeces and urine occurred in only 54.2% of cases. However, there was a significant association between resistance ot mercuric and tellurite ions in fecal and urinary strains isolated from the same patient (p<0.001.

  14. Biotype Characterization, Developmental Profiling, Insecticide Response and Binding Property of Bemisia tabaci Chemosensory Proteins: Role of CSP in Insect Defense.

    Directory of Open Access Journals (Sweden)

    Guoxia Liu

    Full Text Available Chemosensory proteins (CSPs are believed to play a key role in the chemosensory process in insects. Sequencing genomic DNA and RNA encoding CSP1, CSP2 and CSP3 in the sweet potato whitefly Bemisia tabaci showed strong variation between B and Q biotypes. Analyzing CSP-RNA levels showed not only biotype, but also age and developmental stage-specific expression. Interestingly, applying neonicotinoid thiamethoxam insecticide using twenty-five different dose/time treatments in B and Q young adults showed that Bemisia CSP1, CSP2 and CSP3 were also differentially regulated over insecticide exposure. In our study one of the adult-specific gene (CSP1 was shown to be significantly up-regulated by the insecticide in Q, the most highly resistant form of B. tabaci. Correlatively, competitive binding assays using tryptophan fluorescence spectroscopy and molecular docking demonstrated that CSP1 protein preferentially bound to linoleic acid, while CSP2 and CSP3 proteins rather associated to another completely different type of chemical, i.e. α-pentyl-cinnamaldehyde (jasminaldehyde. This might indicate that some CSPs in whiteflies are crucial to facilitate the transport of fatty acids thus regulating some metabolic pathways of the insect immune response, while some others are tuned to much more volatile chemicals known not only for their pleasant odor scent, but also for their potent toxic insecticide activity.

  15. Management Options and Factors Affecting Control of a Common Waterhemp (Amaranthus rudis Biotype Resistant to Protoporphyrinogen Oxidase-Inhibiting Herbicides

    Directory of Open Access Journals (Sweden)

    Dana B. Harder

    2012-01-01

    Full Text Available Repeated use of protox-inhibiting herbicides has resulted in a common waterhemp (Amaranthus rudis Sauer biotype that survived lactofen applied up to 10 times the labeled rate. Field and greenhouse research evaluated control options for this biotype of common waterhemp. In the field, PRE applications of flumioxazin at 72 g ai ha−1, sulfentrazone at 240 g ai ha−1, and isoxaflutole at 70 g ai ha−1 controlled common waterhemp >90% up to 6 weeks after treatment. POST applications of fomesafen at 330 g ai ha−1, lactofen at 220 g ai ha−1, and acifluorfen at 420 g ai ha−1 resulted in <60% visual control of common waterhemp, but differences were detected among herbicides. In the greenhouse, glyphosate was the only herbicide that controlled protox resistant waterhemp. The majority of herbicide activity from POST flumioxazin, fomesafen, acifluorfen, and lactofen was from foliar placement, but control was less than 40% regardless of placement. Control of common waterhemp seeded at weekly intervals after herbicide treatment with flumioxazin, fomesafen, sulfentrazone, atrazine, and isoxaflutole exceeded 85% at 0 weeks after herbicide application (WAHA, while control with isoxaflutole was greater than 60% 6 WAHA. PRE and POST options for protox-resistant common waterhemp are available to manage herbicide resistance.

  16. Glyphosate effects on gas exchange and chlorophyll fluorescence responses of two Lolium perenne L. biotypes with differential herbicide sensitivity.

    Science.gov (United States)

    Yanniccari, Marcos; Tambussi, Eduardo; Istilart, Carolina; Castro, Ana María

    2012-08-01

    Despite the extensive use of glyphosate, how it alters the physiology and metabolism of plants is still unclear. Photosynthesis is not regarded to be a primary inhibitory target of glyphosate, but it has been reported to be affected by this herbicide. The aim of the current research was to determine the effects of glyphosate on the light and dark reactions of photosynthesis by comparing glyphosate-susceptible and glyphosate-resistant Lolium perenne biotypes. After glyphosate treatment, accumulation of reduced carbohydrates occurred before a decrease in gas exchange. Stomatal conductance and CO(2) assimilation were reduced earlier than chlorophyll fluorescence and the amount of chlorophyll in susceptible plants. In the glyphosate-resistant biotype, stomatal conductance was the only parameter slightly affected only 5 days post-application. In susceptible plants, the initial glyphosate effects on gas exchange could be a response to a feedback regulation of photosynthesis. Since the herbicide affects actively growing tissues regardless of the inhibition of photosynthesis, the demand of assimilates decreased and consequently induced an accumulation of carbohydrates in leaves. We concluded that stomatal conductance could be a very sensitive parameter to assess both the susceptibility/resistance to glyphosate before the phytotoxic symptoms become evident.

  17. Biotype Characterization, Developmental Profiling, Insecticide Response and Binding Property of Bemisia tabaci Chemosensory Proteins: Role of CSP in Insect Defense

    Science.gov (United States)

    Liu, Guoxia; Ma, Hongmei; Xie, Hongyan; Xuan, Ning; Guo, Xia; Fan, Zhongxue; Rajashekar, Balaji; Arnaud, Philippe; Offmann, Bernard; Picimbon, Jean-François

    2016-01-01

    Chemosensory proteins (CSPs) are believed to play a key role in the chemosensory process in insects. Sequencing genomic DNA and RNA encoding CSP1, CSP2 and CSP3 in the sweet potato whitefly Bemisia tabaci showed strong variation between B and Q biotypes. Analyzing CSP-RNA levels showed not only biotype, but also age and developmental stage-specific expression. Interestingly, applying neonicotinoid thiamethoxam insecticide using twenty-five different dose/time treatments in B and Q young adults showed that Bemisia CSP1, CSP2 and CSP3 were also differentially regulated over insecticide exposure. In our study one of the adult-specific gene (CSP1) was shown to be significantly up-regulated by the insecticide in Q, the most highly resistant form of B. tabaci. Correlatively, competitive binding assays using tryptophan fluorescence spectroscopy and molecular docking demonstrated that CSP1 protein preferentially bound to linoleic acid, while CSP2 and CSP3 proteins rather associated to another completely different type of chemical, i.e. α-pentyl-cinnamaldehyde (jasminaldehyde). This might indicate that some CSPs in whiteflies are crucial to facilitate the transport of fatty acids thus regulating some metabolic pathways of the insect immune response, while some others are tuned to much more volatile chemicals known not only for their pleasant odor scent, but also for their potent toxic insecticide activity. PMID:27167733

  18. [Effects of calcium fertilizer on the development, survival, and feeding of B-biotype Bemisia tabaci on Euphorbia pulcherrima].

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    Huang, Jun; Zhang, Juan; Yu, Yong-Ming; Liu, Jian-Xin; Li, Ming-Jiang; Zhu, Kai-Yuan

    2012-09-01

    This paper studied the development, survival, and feeding of B-biotype Bemisia tabaci on Euphorbia pulcherrima under the conditions of 26 +/- 1 degrees C and 60% - 80% relative humidity after applying calcium fertilizer, taking applying fresh water as the control. There existed significant differences in the developmental duration of B. tabaci between treatment applying calcium fertilizer and the control. After applying calcium fertilizer, the egg stage of B. tabaci shortened significantly, and the development from egg to adult took 20.18 days (for the control, it took 18.72 days). However, there were no significant differences in the survival rates of B. tabaci at different development stages between the two treatments. The feeding of B. tabaci on E. pulcherrima induced the plant leaf chlorophyll fluorescence parameters changed, i. e., the photochemical efficiency (Fv/Fm), photochemical quenching coefficient (q(p)), light use efficiency (alpha), maximum photosynthesis rate (rETRmax), and tolerance to light (I(k)) decreased significantly, while the non-photochemical quenching coefficient (NPQ) had a significant increase. After applying calcium fertilizer, the plant leaf photoinhibition parameter (beta), rETRmax, and I(k) had less difference with th e control. The nail polish blot observation on the lower epidermis structure of plant leaf showed that calcium fertilizer could effectively compensate the decrease in the photosynthesis of E. pulcherrima damaged by B-biotype B. tabaci.

  19. Vibrio vulnificus biotype 2 serovar E gne but not galE is essential for lipopolysaccharide biosynthesis and virulence.

    Science.gov (United States)

    Valiente, Esmeralda; Jiménez, Natalia; Merino, Susana; Tomás, Juan M; Amaro, Carmen

    2008-04-01

    This work aimed to establish the role of gne (encoding UDP-GalNAc 4-epimerase activity) and galE (encoding UDP-Gal-4-epimerase activity) in the biosynthesis of surface polysaccharides, as well as in the virulence for eels and humans of the zoonotic serovar of Vibrio vulnificus biotype 2, serovar E. DNA sequence data revealed that gne and galE are quite homologous within this species (> or =90% homology). Mutation in gne of strain CECT4999 increased the surface hydrophobicity, produced deep alterations in the outer membrane architecture, and resulted in noticeable increases in the sensitivity to microcidal peptides (MP), to eel and human sera, and to phagocytosis/opsonophagocytosis. Furthermore, significant attenuation of virulence for eels and mice was observed. By contrast, mutation in galE did not alter the cellular surface, did not increase the sensitivity to MP, serum, or phagocytosis, and did not affect the virulence for fish and mice. The change in the attenuated-virulence phenotype produced by a mutation in gne was correlated with the loss of the O-antigen lipopolysaccharide (LPS), while the capsule was maintained. Complementation of a gne-deficient mutant restored the LPS structure together with the whole virulence phenotype. In conclusion, gne, but not galE, is essential for LPS biosynthesis and virulence in the zoonotic serovar of V. vulnificus biotype 2.

  20. Biotype identification and epidemiological analysis of twenty-four Brucella strains%24株布鲁菌的种型鉴定和流行病学分析

    Institute of Scientific and Technical Information of China (English)

    张磊; 屈平华; 吴尚为; 陈经雕

    2016-01-01

    Objective To identify the biotype and analyze the epidemiological characteristics of twentyfour Brurella strains from the primary hospitals in Guangdong Province.Methods The twenty-four Brucella strains,collected from Oct.2009 to Oct.2015,were identified by routine biochemical methods,VITEK 2 COMPACT automatic microbial identification analyzer,16S rRNA gene sequencing and biology phenotype based on serological and bacteriophages lysis test.The etiology was analyzed based on clinical data,biotypes of the isolates and other clinical information.Results All of the twenty-four strains were Gram-negative coccobacilli,including two strains of Brucella suis biotype Ⅱ,four strains of Brucella melitensis biotype Ⅰ and eighteen strains of Brucella melitensis biotype Ⅲ.By GN card of VITEK 2 COMPACT automatic microbial identification analyzer,one strain was mistaken as Bordetella bronchiseptica and two strains were mistaken as Ochrobaetrum anthropi.The 16S rRNA gene sequencing showed they were high homology to Ochrobactrum intermedium and Ochrobaetrum anthropi,which completely excluded the possibility of Bordetella bronchiseptica.Tbe clinical data showed that all of the twenty-four patients were adults with an average age of 49.0 years old,men and women were twelve people respectively,with no significant gender differences and no occupational exposure,which presenting a wide and diverse range of nonspecific clinical signs and symptoms,but brucellosis was not aware of by the physician.Conclusion Brucella melitensis biotype Ⅲ is the main pathogen of brucellosis,with the characteristics of sporadic outbreak and occult infection in the primary hospitals in Guangdong Province.%目的 对广东省基层地区24株布鲁菌进行种型鉴定和流行病学分析.方法 对24株来自于2009年10月至2015年10月广东省基层医院血培养阳性的布鲁菌进行传统生化鉴定、VITEK 2仪器鉴定、16S rRNA基因测序、血清学试验和噬菌体试验,比较不

  1. Vibrio cholerae Serogroup O139: Isolation from Cholera Patients and Asymptomatic Household Family Members in Bangladesh between 2013 and 2014.

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    Fahima Chowdhury

    2015-11-01

    Full Text Available Cholera is endemic in Bangladesh, with outbreaks reported annually. Currently, the majority of epidemic cholera reported globally is El Tor biotype Vibrio cholerae isolates of the serogroup O1. However, in Bangladesh, outbreaks attributed to V. cholerae serogroup O139 isolates, which fall within the same phylogenetic lineage as the O1 serogroup isolates, were seen between 1992 and 1993 and in 2002 to 2005. Since then, V. cholerae serogroup O139 has only been sporadically isolated in Bangladesh and is now rarely isolated elsewhere.Here, we present case histories of four cholera patients infected with V. cholerae serogroup O139 in 2013 and 2014 in Bangladesh. We comprehensively typed these isolates using conventional approaches, as well as by whole genome sequencing. Phenotypic typing and PCR confirmed all four isolates belonging to the O139 serogroup.Whole genome sequencing revealed that three of the isolates were phylogenetically closely related to previously sequenced El Tor biotype, pandemic 7, toxigenic V. cholerae O139 isolates originating from Bangladesh and elsewhere. The fourth isolate was a non-toxigenic V. cholerae that, by conventional approaches, typed as O139 serogroup but was genetically divergent from previously sequenced pandemic 7 V. cholerae lineages belonging to the O139 or O1 serogroups.These results suggest that previously observed lineages of V. cholerae O139 persist in Bangladesh and can cause clinical disease and that a novel disease-causing non-toxigenic O139 isolate also occurs.

  2. Vibrio cholerae Serogroup O139: Isolation from Cholera Patients and Asymptomatic Household Family Members in Bangladesh between 2013 and 2014

    Science.gov (United States)

    Chowdhury, Fahima; Mather, Alison E.; Begum, Yasmin Ara; Asaduzzaman, Muhammad; Baby, Nabilah; Sharmin, Salma; Biswas, Rajib; Ikhtear Uddin, Muhammad; LaRocque, Regina C.; Harris, Jason B.; Calderwood, Stephen B.; Ryan, Edward T.; Clemens, John D.; Thomson, Nicholas R.; Qadri, Firdausi

    2015-01-01

    Background Cholera is endemic in Bangladesh, with outbreaks reported annually. Currently, the majority of epidemic cholera reported globally is El Tor biotype Vibrio cholerae isolates of the serogroup O1. However, in Bangladesh, outbreaks attributed to V. cholerae serogroup O139 isolates, which fall within the same phylogenetic lineage as the O1 serogroup isolates, were seen between 1992 and 1993 and in 2002 to 2005. Since then, V. cholerae serogroup O139 has only been sporadically isolated in Bangladesh and is now rarely isolated elsewhere. Methods Here, we present case histories of four cholera patients infected with V. cholerae serogroup O139 in 2013 and 2014 in Bangladesh. We comprehensively typed these isolates using conventional approaches, as well as by whole genome sequencing. Phenotypic typing and PCR confirmed all four isolates belonging to the O139 serogroup. Findings Whole genome sequencing revealed that three of the isolates were phylogenetically closely related to previously sequenced El Tor biotype, pandemic 7, toxigenic V. cholerae O139 isolates originating from Bangladesh and elsewhere. The fourth isolate was a non-toxigenic V. cholerae that, by conventional approaches, typed as O139 serogroup but was genetically divergent from previously sequenced pandemic 7 V. cholerae lineages belonging to the O139 or O1 serogroups. Conclusion These results suggest that previously observed lineages of V. cholerae O139 persist in Bangladesh and can cause clinical disease and that a novel disease-causing non-toxigenic O139 isolate also occurs. PMID:26562418

  3. Dimensional Changes in Alveolar Ridge Following Extraction of Teeth in the Maxillary Premolar Area in Subjects with Thick and Thin Gingival Biotypes: A Pilot Study.

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    Abdelhafez, Reem S; Alhabashneh, Rola; Khader, Yousef; Hijazi, Mohammed; Jarah, Mohammed

    2016-01-01

    This study investigated changes in residual ridge dimensions after tooth extraction among thin and thick gingival biotypes. Fifteen patients who required extraction of maxillary premolars were classified according to gingival biotypes (10 teeth in 9 participants were included in the thick group, and 6 teeth in 6 participants were included in the thin group). Minimally traumatic extractions were carried out using periotomes and rotational movement of teeth. At the time of extraction an osteometer was used to measure the thickness of the labial plate and the bony alveolar ridge at the extraction site by penetrating the tissues until bone was reached 5 mm, 7 mm, and 10 mm below the midpoint of the crest of the facial and palatal gingival margins. Standardized radiographs were taken immediately and after 3 months. The results of this study show minimal differences in dimensional changes following extraction of premolar teeth in thick and thin gingival biotypes. Significantly greater bone loss was detected in both gingival biotypes when the labial plate thickness was less than 1.5 mm, especially in alveolar ridge height.

  4. Improved DNA barcoding method for Bemisia tabaci and related Aleyrodidae: Development of universal and Bemisia tabaci biotype-specific mitochondrial cytochrome c oxidase I polymerase chain reaction primers

    Science.gov (United States)

    Whitefly is the common name of heteropteran insects that comprise the Aleyrodidae family composed of over 160 genera and 1500 different species. The mitochondrial cytochome c oxidase I (mtCOI) sequence has been used extensively in whitefly phylogenetic comparisons and in biotype identification of th...

  5. Metabolic profiling and enzyme analyses indicate a potential role of antioxidant systems in complementing glyphosate resistance in an Amaranthus palmeri biotype

    Science.gov (United States)

    Targeted metabolomic profiling and biochemical assays were employed to identify metabolite-level perturbations induced by glyphosate in susceptible (S) and resistant (R) biotypes of Amaranthus palmeri. Plants were treated with 0.4 kg ae ha-1 glyphosate and tissues were harvested at 8 and 72 hours af...

  6. Isolation and molecular characterization of type I and type II feline coronavirus in Malaysia

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    Amer Alazawy

    2012-11-01

    Full Text Available Abstract Background Feline infectious peritonitis virus (FIPV and feline enteric coronavirus (FECV are two important coronaviruses of domestic cat worldwide. Although FCoV is prevalent among cats; the fastidious nature of type I FCoV to grow on cell culture has limited further studies on tissue tropism and pathogenesis of FCoV. While several studies reported serological evidence for FCoV in Malaysia, neither the circulating FCoV isolated nor its biotypes determined. This study for the first time, describes the isolation and biotypes determination of type I and type II FCoV from naturally infected cats in Malaysia. Findings Of the total number of cats sampled, 95% (40/42 were RT-PCR positive for FCoV. Inoculation of clinical samples into Crandell feline kidney cells (CrFK, and Feline catus whole fetus-4 cells (Fcwf-4, show cytopathic effect (CPE characterized by syncytial cells formation and later cell detachment. Differentiation of FCoV biotypes using RT-PCR assay revealed that, 97.5% and 2.5% of local isolates were type I and type II FCoV, respectively. These isolates had high sequence homology and phylogenetic similarity with several FCoV isolates from Europe, South East Asia and USA. Conclusions This study reported the successful isolation of local type I and type II FCoV evident with formation of cytopathic effects in two types of cell cultures namely the CrFK and Fcwf-4 , where the later cells being more permissive. However, the RT-PCR assay is more sensitive in detecting the antigen in suspected samples as compared to virus isolation in cell culture. The present study indicated that type I FCoV is more prevalent among cats in Malaysia.

  7. High Ozone (O3) Affects the Fitness Associated with the Microbial Composition and Abundance of Q Biotype Bemisia tabaci

    Science.gov (United States)

    Hong, Yanyun; Yi, Tuyong; Tan, Xiaoling; Zhao, Zihua; Ge, Feng

    2016-01-01

    Ozone (O3) affects the fitness of an insect, such as its development, reproduction and protection against fungal pathogens, but the mechanism by which it does so remains unclear. Here, we compared the fitness (i.e., the growth and development time, reproduction and protection against Beauveria bassiana (B. bassiana) of Q biotype whiteflies fumigated under hO3 (280 ± 20 ppb) and control O3 (50 ± 10 ppb) concentrations. Moreover, we determined that gene expression was related to development, reproduction and immunity to B. bassiana and examined the abundance and composition of bacteria and fungi inside of the body and on the surface of the Q biotype whitefly. We observed a significantly enhanced number of eggs that were laid by a female, shortened developmental time, prolonged adult lifespan, decreased weight of one eclosion, and reduced immunity to B. bassiana in whiteflies under hO3, but hO3 did not significantly affect the expression of genes related to development, reproduction and immunity. However, hO3 obviously changed the composition of the bacterial communities inside of the body and on the surface of the whiteflies, significantly reducing Rickettsia and enhancing Candidatus_Cardinium. Similarly, hO3 significantly enhanced Thysanophora penicillioides from the Trichocomaceae family and reduced Dothideomycetes (at the class level) inside of the body. Furthermore, positive correlations were found between the abundance of Candidatus_Cardinium and the female whitefly ratio and the fecundity of a single female, and positive correlations were found between the abundance of Rickettsia and the weight of adult whiteflies just after eclosion and immunity to B. bassiana. We conclude that hO3 enhances whitefly development and reproduction but impairs immunity to B. bassiana, and our results also suggest that the changes to the microbial environments inside of the body and on the surface could be crucial factors that alter whitefly fitness under hO3. PMID:27799921

  8. Characterization of Biofilm Formation in [Pasteurella] pneumotropica and [Actinobacillus] muris Isolates of Mouse Origin.

    Science.gov (United States)

    Sager, Martin; Benten, W Peter M; Engelhardt, Eva; Gougoula, Christina; Benga, Laurentiu

    2015-01-01

    [Pasteurella] pneumotropica biotypes Jawetz and Heyl and [Actinobacillus] muris are the most prevalent Pasteurellaceae species isolated from laboratory mouse. However, mechanisms contributing to their high prevalence such as the ability to form biofilms have not been studied yet. In the present investigation we analyze if these bacterial species can produce biofilms in vitro and investigate whether proteins, extracellular DNA and polysaccharides are involved in the biofilm formation and structure by inhibition and dispersal assays using proteinase K, DNase I and sodium periodate. Finally, the capacity of the biofilms to confer resistance to antibiotics is examined. We demonstrate that both [P.] pneumotropica biotypes but not [A.] muris are able to form robust biofilms in vitro, a phenotype which is widely spread among the field isolates. The biofilm inhibition and dispersal assays by proteinase and DNase lead to a strong inhibition in biofilm formation when added at the initiation of the biofilm formation and dispersed pre-formed [P.] pneumotropica biofilms, revealing thus that proteins and extracellular DNA are essential in biofilm formation and structure. Sodium periodate inhibited the bacterial growth when added at the beginning of the biofilm formation assay, making difficult the assessment of the role of β-1,6-linked polysaccharides in the biofilm formation, and had a biofilm stimulating effect when added on pre-established mature biofilms of [P.] pneumotropica biotype Heyl and a majority of [P.] pneumotropica biotype Jawetz strains, suggesting that the presence of β-1,6-linked polysaccharides on the bacterial surface might attenuate the biofilm production. Conversely, no effect or a decrease in the biofilm quantity was observed by biofilm dispersal using sodium periodate on further biotype Jawetz isolates, suggesting that polysaccharides might be incorporated in the biofilm structure. We additionally show that [P.] pneumotropica cells enclosed in biofilms

  9. Microbiological changes and diversity in autochthonous non-toxigenic Corynebacterium diphtheriae isolated in France.

    Science.gov (United States)

    Farfour, E; Badell, E; Dinu, S; Guillot, S; Guiso, N

    2013-10-01

    Autochtonous toxigenic Corynebacterium diphtheriae have disappeared in mainland France, but non-toxigenic C. diphtheriae are still circulating. Using phenotypic and molecular tools, we retrospectively characterized 103 non-toxigenic C. diphtheriae collected in mainland France and highlight several changes. The proportion of C. diphtheriae belfanti increased between 1977 and 2011 and it is the most frequent biotype recovered in recent years. Resistance to ciprofloxacin has increased and most isolates with decreased sensitivity belong to the belfanti biotype. Using multilocus sequence typing, we demonstrate that French isolates are distributed in a large number of sequence types and identify three distinct lineages. C. diphtheriae mitis and gravis form lineage I while C. diphtheriae belfanti forms lineages II and III. Almost all isolates of lineage II are part of a unique clonal complex or are very close to it. Most French isolates have a dtxR sequence homologous to that of toxigenic isolates, suggesting that if lyzogenised by a corynephage, they can express diphtheria toxin.

  10. Uso da eletroforese de isoenzimas para avaliação da competitividade de biotipos de tiririca Isoenzyme evaluation of intra-specific competitivity of purple nutsedge biotypes

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    Carlos A. R. Silva

    2000-08-01

    Full Text Available O presente trabalho teve o objetivo de avaliar, por meio de eletroforese de isoenzimas, em casa de vegetação, a competitividade dos biotipos de tiririca (Cyperus rotundus L. mais freqüentes que ocorrem no estado de São Paulo. Dos quatorze sistemas enzimáticos testados, seis apresentaram polimorfismo (a e b-EST, ACP, IDH, MDH e SKDH e foram utilizados para a identificação das 66 amostras coletadas, classificando-as em 10 biotipos de Cyperus rotundus. Durante a amostragem, foram identificadas as espécies C. flavus, C. iria e C. esculentus. Foram identificados diferentes biotipos de C. rotundus, com diferentes freqüências de ocorrência no estado de São Paulo. Houve predominância de dois biotipos, que estiveram presentes em 48,5% e 21,2% dos pontos de amostragem. Os diferentes biotipos de C. rotundus mostraram-se distintos em termos de competitividade intra-específica. Os biotipos mais competitivos foram os mais freqüentes nas avaliações de campo.The objective of this research was to evaluate intra-specific competition ability of purple nutsedge Cyperus rotundus biotypes, using isoenzymes. We sampled weed populations in 66 sites all around São Paulo State - Brazil. Polymorphism was observed in six out of fourteen enzymatic systems studied (aand b-EST, ACP, IDH, MDH, and SKDH. Polymorphism was not observed for ADH, CAT, GDH, AAT, LAP, MADH, PER, and SDH. Using the information of the six polymorphic isoenzymes, it was possible to identify 10 biotypes of Cyperus rotundus and C. flavus, C. iria e C. esculentus species. The two major biotypes were predominant in 48.5% and 21.2% of the sampling sites. The competition ability assay was carried out showing that the most widely spread biotypes were the most competitive ones.

  11. Cyclical parthenogenetic reproduction in the Russian wheat aphid (Hemiptera: Aphididae) in the United States: sexual reproduction and its outcome on biotypic diversity.

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    Puterka, G J; Hammon, R W; Burd, J D; Peairs, F B; Randolph, T L; Cooper, W R

    2012-06-01

    In 1986, the Russian wheat aphid, Diuraphis noxia (Kurdjumov) (Hemiptera: Aphididae), became an invasive species of United States. Nearly 20 yr later, new biotypes appeared that were capable of overcoming most sources of resistance and became a renewed threat to wheat, Triticum aestivum L., production. Cyclical (CP) and obligate (OP) parthenogenesis enables aphids to both adapt to changing environments and exploit host resources. We documented these forms of reproduction for Russian wheat aphid in wheat and wild grasses in the Central Great Plains and Rocky Mountain regions during falls 2004-2009. Colonies from sample sites also were held under unheated greenhouse conditions and observed for the presence of sexual morphs and eggs through the winter. Russian wheat aphid populations were mainly OP and attempted to overwinter as adults, regardless of region sampled. A few populations contained oviparae but no males (gynocyclic) and were not specific to any particular region. Observation of the Russian wheat aphid colonies under greenhouse conditions failed to produce males or eggs. In spring 2007, CP was confirmed in a small population of Russian wheat aphid that eclosed from eggs (fundatricies) on wild grasses and wheat near Dove Creek, CO, in the Colorado Plateau region where other aphid species undergo CP. Lineages from ninety-three fundatricies were screened against 16 resistant and susceptible cereal entries to determine their biotypic classification. A high degree of biotypic diversity (41.4%) was detected in this population. Although CP was a rare in Russian wheat aphid populations, genetic recombination during the sexual cycle creates new biotypes and can have significant effects on population genetics.

  12. About the interplay of sensitive and resistant biotypes in weed populations - simulation exercises for Echinochloa crus-galli in maize crops

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    von Redwitz, Christoph

    2016-02-01

    Full Text Available Weed species easily establish in crops with a similar life cycle. Especially mono-cropping provides best conditions for such weeds. In maize this is true for Echinochloa crus-galli, which is a C4 plant and one of the worst weeds worldwide. In Germany E. crus-galli is one of the few typical weed species in maize. When recurrent herbicide treatments are applied, development of herbicide resistance is likely. Since maize is typically only treated once with herbicides, later germinating weeds can escape and produce seeds. These escaping weeds are not selected for herbicide resistance. Hence, they still have a more sensitive gene pool. E. crus-galli emerges with the highest density in spring and continues to germinate over the whole vegetative period of maize. In that way the early germinating biotypes are selected for herbicide resistance while the later germinating biotypes are not. To avoid the reproduction of E. crus-galli effort is made to suppress these later germinating weeds. Using undersown cover crops is one way to do that. We hypothesize that suppressing the later germinating biotypes enhances the development of herbicide resistance. We simulated the development of herbicide resistance in populations of E. crus-galli, composed of sensitive and resistant biotypes, in a continuous maize cropping system. We used the model PROSPER for our simulations. We assumed three levels of suppression of the later germinating weeds (0%, 30%, and 100%. The results show a faster development of herbicide resistance, when the later germinating individuals are suppressed. Nevertheless, the suppressive effect of undersown crops is able to lower the weed density even with high resistance level in the population.

  13. Characterization of Campylobacter jejuni and Campylobacter coli strains isolated in the region of Niš, Serbia

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    Miljković-Selimović Biljana

    2010-01-01

    Full Text Available Introduction. Campylobacter jejuni and Campylobacter coli represent one of the main causes of bacterial diarrhoea in humans. Although the disease is usually mild and self-limiting, severe chronic sequelae may occur, such as reactive arthritis, Guillain-Barré and Miller Fisher syndromes. Serotyping is used as an epidemiological marker, while post-infective polyneuropathies are associated with several O serotypes. Objective. Strains of C. jejuni and C. coli were serotyped based on heat stable (HS and heat labile (HL antigens, as well as biotypes to determine strain diversity. Methods. Campylobacter spp. was isolated using selective blood media with antibiotics. Differentiation to the species level was done by a combination of biotyping tests and by a PCR-based RFLP test. The isolates were characterised by Penner and Lior serotyping methods. Results. The serotypes showed diversity without predominant serotypes. 24 HS serotypes were detected among 29 C. jejuni strains, and seven serotypes among nine C. coli strains. HL serotyping method successfully typed 62.5% of strains. Among 16 C. jejuni strains 14 serotypes were detected, and three among four C. coli strains. A C. jejuni strain associated with a patient with Guillain-Barré syndrome was typed as biotype II, O:19. Conclusion. The biotyping and serotyping results have indicated that C. jejuni and C. coli strains in the region of Niš, Serbia are diverse and could be probably of unrelated sources of origin or reservoirs. The strain associated with the Guillain-Barré syndrome patient was serotype O:19, one of the most common in this post-infective complication.

  14. Viridans Group Streptococci clinical isolates: MALDI-TOF mass spectrometry versus gene sequence-based identification.

    Directory of Open Access Journals (Sweden)

    Silvia Angeletti

    Full Text Available Viridans Group Streptococci (VGS species-level identification is fundamental for patients management. Matrix-assisted laser desorption ionization-time of flight mass spectrometry (MALDI-TOF MS has been used for VGS identification but discrimination within the Mitis group resulted difficult. In this study, VGS identifications with two MALDI-TOF instruments, the Biotyper (Bruker and the VITEK MS (bioMérieux have been compared to those derived from tuf, soda and rpoB genes sequencing. VGS isolates were clustered and a dendrogram constructed using the Biotyper 3.0 software (Bruker. RpoB gene sequencing resulted the most sensitive and specific molecular method for S. pneumonia identification and was used as reference method. The sensitivity and the specificity of the VITEK MS in S. pneumonia identification were 100%, while the Biotyper resulted less specific (92.4%. In non pneumococcal VGS strains, the group-level correlation between rpoB and the Biotyper was 100%, while the species-level correlation was 61% after database upgrading (than 37% before upgrading. The group-level correlation between rpoB and the VITEK MS was 100%, while the species-level correlation was 36% and increases at 69% if isolates identified as S. mitis/S. oralis are included. The less accurate performance of the VITEK MS in VGS identification within the Mitis group was due to the inability to discriminate between S. mitis and S. oralis. Conversely, the Biotyper, after the release of the upgraded database, was able to discriminate between the two species. In the dendrogram, VGS strains from the same group were grouped into the same cluster and had a good correspondence with the gene-based clustering reported by other authors, thus confirming the validity of the upgraded version of the database. Data from this study demonstrated that MALDI-TOF technique can represent a rapid and cost saving method for VGS identification even within the Mitis group but improvements of spectra

  15. Importance and approaches for the control of different photosystem-II-inhibitor resistant Chenopodium album biotypes in sugar beet and potatoes

    Directory of Open Access Journals (Sweden)

    Agrikola, Yvonne

    2012-03-01

    Full Text Available Resistances in weeds for PS-II herbicides are well known. Since the end of the 1970s especially resistances to triazines in maize represented a problem. Today, because of the variety of alternative active ingredients in maize, this problem is considered to be solved. This is different in sugar beet and potatoes because hardly any new herbicides have been developed during the last 20 years. Chenopodium album is a major weed in all summer crops. In maize, resistance to triazines (target-site resistance (TSR at position 264 on the D1 protein is known. In recent years, new TSR in C. album (position 251 in Sweden and 218 in Lower Saxony, Germany has been found. These biotypes exhibit resistances to triazinones and chloridazon but showed no cross-resistances to triazines. An outdoor pot trial with sugar beets and potatoes showed that higher dosages of ethofumesate in sugar beets and aclonifen in potatoes are able to control triazine and triazinone resistant C. album biotypes to certain extend or even completely, respectivly. A competition pot trial with maize and different C. album biotypes showed no significant differences in weed fitness concerning the parameters plant height, biomass and seed production.

  16. 牙周生物型对种植治疗的影响%The influence of periodontal biotype on implant treatment

    Institute of Scientific and Technical Information of China (English)

    袁洁(综述); 姜宝岐(审校)

    2016-01-01

    种植的成功需要满足功能与美学两方面的要求。牙周生物型是获得种植修复美学效果、提高即刻种植成功率、预防远期牙龈退缩的一项重要的评估指标。种植术前对牙周生物型进行准确评估是制定种植治疗计划及获得可预期种植美学效果的重要环节。本文就牙周生物型对种植治疗的影响作一综述。%A successful implant should fulfill both the functional and the esthetic criteria.Periodontal bio-type is an important parameter to consider in achieving esthetic implant restoration,improving immediate implant suc-cess,and preventing future gingival recession.An accurate diagnosis of periodontal biotype before implant surgery is of the utmost importance in making an appropriate implant treatment plan and achieving a predictable esthetic outcome. This paper reviews the influence of periodontal biotype on implant treatment.

  17. Phytomorphological and essential-oil characterization in situ and ex situ of wild biotypes of oregano collected in the Campania region (Southern Italy).

    Science.gov (United States)

    De Falco, Enrica; Roscigno, Graziana; Iodice, Carmela; Senatore, Felice

    2013-11-01

    Oregano is an aromatic species of great interest, which spreads spontaneously over the Mediterranean area, but its genetic resources are not yet adequately developed. Moreover, the results of studies of wild strains of different origin - although quite numerous - are not always comparable, and, therefore, the influence of the environment and genotype on the variability cannot be distinguished. Hence, the plant morphology and the essential-oil composition of three wild, white-flowering biotypes of oregano collected in the Campania region (southern Italy) were characterized, and the effects of genotype and environment were assessed by comparison in situ and ex situ. This allowed deducing that the biotypes belonged to two different subspecies, i.e., Origanum vulgare ssp. virens and O. vulgare ssp. viridulum. The essential-oil yield was higher for the biotype belonging to ssp. virens, and it was significantly correlated with the glandular and stomatal density. The chemical composition of the oils obtained by hydrodistillation was found to be influenced by the genotype and the conditions of plant growth.

  18. Identification and characterization of RAPD-SCAR markers linked to glyphosate-susceptible and -resistant biotypes of Eleusine indica (L.) Gaertn.

    Science.gov (United States)

    Cha, Thye San; Anne-Marie, Kaben; Chuah, Tse Seng

    2014-02-01

    Eleusine indica is one of the most common weed species found in agricultural land worldwide. Although herbicide-glyphosate provides good control of the weed, its frequent uses has led to abundant reported cases of resistance. Hence, the development of genetic markers for quick detection of glyphosate-resistance in E. indica population is imperative for the control and management of the weed. In this study, a total of 14 specific random amplified polymorphic DNA (RAPD) markers were identified and two of the markers, namely S4R727 and S26R6976 were further sequence characterized. Sequence alignment revealed that marker S4R727 showing a 12-bp nucleotides deletion in resistant biotypes, while marker S26R6976 contained a 167-bp nucleotides insertion in the resistant biotypes. Based on these sequence differences, three pairs of new sequence characterized amplified region (SCAR) primers were developed. The specificity of these primer pairs were further validated with genomic DNA extracted from ten individual plants of one glyphosate-susceptible and five glyphosate-resistant (R2, R4, R6, R8 and R11) populations. The resulting RAPD-SCAR markers provided the basis for assessing genetic diversity between glyphosate-susceptible and -resistant E. indica biotypes, as well for the identification of genetic locus link to glyphosate-resistance event in the species.

  19. Identification of Candida haemulonii Complex Species: Use of ClinProTools(TM) to Overcome Limitations of the Bruker Biotyper(TM), VITEK MS(TM) IVD, and VITEK MS(TM) RUO Databases.

    Science.gov (United States)

    Grenfell, Rafaella C; da Silva Junior, Afonso R; Del Negro, Gilda M B; Munhoz, Regina B; Gimenes, Viviane M F; Assis, Diego M; Rockstroh, Anna C; Motta, Adriana L; Rossi, Flavia; Juliano, Luiz; Benard, Gil; de Almeida Júnior, João N

    2016-01-01

    Candida haemulonii is now considered a complex of two species and one variety: C. haemulonii sensu stricto, Candida duobushaemulonii and the variety C. haemulonii var. vulnera. Identification (ID) of these species is relevant for epidemiological purposes and for therapeutic management, but the different phenotypic commercial systems are unable to provide correct species ID for these emergent pathogens. Hence, we evaluated the MALDI-TOF MS performance for the ID of C. haemulonii species, analyzing isolates/strains of C. haemulonii complex species, Candida pseudohaemulonii and Candida auris by two commercial platforms, their databases and softwares. To differentiate C. haemulonii sensu sctricto from the variety vulnera, we used the ClinProTools(TM) models and a single-peak analysis with the software FlexAnalysis(TM). The Biotyper(TM) database gave 100% correct species ID for C. haemulonii sensu stricto, C. pseudohaemulonii and C. auris, with 69% of correct species ID for C. duobushaemulonii. Vitek MS(TM) IVD database gave 100% correct species ID for C. haemulonii sensu stricto, misidentifying all C. duobushaemulonii and C. pseudohaemulonii as C. haemulonii, being unable to identify C. auris. The Vitek MS(TM) RUO database needed to be upgraded with in-house SuperSpectra to discriminate C. haemulonii sensu stricto, C. duobushaemulonii, C. pseudohaemulonii, and C. auris strains/isolates. The generic algorithm model from ClinProTools(TM) software showed recognition capability of 100% and cross validation of 98.02% for the discrimination of C. haemulonii sensu stricto from the variety vulnera. Single-peak analysis showed that the peaks 5670, 6878, or 13750 m/z can distinguish C. haemulonii sensu stricto from the variety vulnera.

  20. Study of methicillin resistant S. aureus (MRSA isolates from high risk patients

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    Vidhani S

    2001-01-01

    Full Text Available MRSA is an important hospital pathogen, the incidence of which is increasing every year especially in high risk groups. The present study was performed in high risk patients admitted in burns and orthopaedic units of LN hospital to study the infection rate of MRSA from these units. The proportion of MRSA amongst S. aureus isolates was found to be 51.6% and these isolates were multidrug resistant. Phage typing of these isolates gave a typeability of 41.8% using the MRSA set of phages. Biotyping of these isolates could divide them into four groups. The study shows a high incidence of MRSA from burns and orthopaedic units with a high level of antibiotic resistance amongst these isolates.

  1. Different cross-resistance patterns to AHAS herbicides of two tribenuron-methyl resistant flixweed (Descurainiasophia L.) biotypes in China.

    Science.gov (United States)

    Deng, Wei; Cao, Yuan; Yang, Qian; Liu, Ming Jie; Mei, Yu; Zheng, Ming Qi

    2014-06-01

    Flixweed (Descurainiasophia L.) is a troublesome weed in winter wheat fields in China. Two flixweed accessions, HB08 and HB16 with a Pro-197-Leu and Pro-197-Ser AHAS-mutation respectively, have evolved very high levels resistance to sulfonylurea (SU) herbicide, tribenuron-methyl. Cross resistance of HB08 and HB16 to AHAS herbicides of SU, imidazolinone (IMI), triazolopyrimidine (TP) and pyrimidinyl-thiobenozoate (PTB) families was investigated by dose-response experiments. In addition, the effects of AHAS herbicides on the activity of AHAS extracted from HB08 and HB16 plants were evaluated. HB16 exhibited cross resistance to SU herbicides halosulfuron-methyl and triasulfuron, TP herbicides flumetsulam and penoxsulam, but displayed more sensitivity to IMI herbicide imazethapyr. By contrast, HB08 only showed cross resistance to SU herbicides halosulfuron-methyl and triasulfuron. The in vitro sensitivity of AHAS to AHAS herbicides is consistent with the results of dose-response experiments and the estimated Pearson's r values for HB08 and HB16 are 0.996 and 0.912 respectively. These indicated that altered AHAS sensitivity was responsible mainly for cross resistance patterns observed in the two resistant biotypes.

  2. Resistance induction in chrysanthemum due to silicon application in the management of whitefly Bemisia tabaci Biotype B (Hemiptera: Aleyrodidae

    Directory of Open Access Journals (Sweden)

    Bruno Almeida Melo

    2015-12-01

    Full Text Available Whitefly Bemisia tabaci biotype B (Hemiptera: Aleyrodidae is a key pest in many cultures worldwide, among them chrysanthemum. The aim of this study was to evaluate whether silicon application in chrysanthemum plants can induce resistance to whitefly. The experiments were conducted in chrysanthemum cv. Rage in a greenhouse at EPAMIG in São João Del Rei, MG. The treatments were: 1 silicon applied as soil drench (dosage of 2t SiO2/ha on the 4th day after planting, 2 two silicon applied as foliar spray on the 4th and 12th days after planting, 3 control, with 10 replications each. The plants were infested with 100 whitefly adults/pot, released 16 days after planting. The number and viability of whitefly eggs and number of nymphs and adults were evaluated. The production of fresh and dry matter of shoots and the silicon content in plants were also evaluated. Silicon did not affect the whitefly oviposition preference; however, it affected the development of nymphs in free-choice test. Foliar silicon applications reduced the viability of whitefly eggs. There was no difference of fresh and dry weight and silicon content in plants with the application of silicon. Therefore, foliar silicon application on chrysanthemum can reduce the viability of eggs and delay the development of nymphs and thus contribute to the integrated whitefly management in commercial crops.

  3. Sustained Local Diversity of Vibrio cholerae O1 Biotypes in a Previously Cholera-Free Country

    Directory of Open Access Journals (Sweden)

    Yan Boucher

    2016-07-01

    Full Text Available Although the current cholera pandemic can trace its origin to a specific time and place, many variants of Vibrio cholerae have caused this disease over the last 50 years. The relative clinical importance and geographical distribution of these variants have changed with time, but most remain in circulation. Some countries, such as Mexico and Haiti, had escaped the current pandemic, until large epidemics struck them in 1991 and 2010, respectively. Cholera has been endemic in these countries ever since. A recent retrospective study in mBio presents the results of more than 3 decades of V. cholerae monitoring from environmental and clinical sources in Mexico (S. Y. Choi et al., mBio 7:e02160-15, 2016, http://dx.doi.org/10.1128/mBio.02160-15. It reveals that multiple V. cholerae variants, including classical strains from the previous pandemic, as well as completely novel biotypes, have been circulating in Mexico. This discovery has important implications for the epidemiology and evolution of V. cholerae.

  4. Mating behaviour of host-specialized and migratory biotypes of the cotton aphid%寄主型和迁飞型棉蚜的交配行为

    Institute of Scientific and Technical Information of China (English)

    张帆; 刘向东

    2012-01-01

    Variation in host use and flight ability in the cotton aphid Aphis gossypii Clover is such that some biotypes can be regarded as cotton-specialized, cucurbits-specialized, migratory and sedentary. However, it is not known whether cotton-specialized and cucurbits-specialized biotypes, or migratory (M) and sedentary (S) biotypes, interbreed. The sexual forms of cotton-specialized, cucurbits-specialized, migratory, and sedentary biotypes were induced under reduced temperature and short photoperiod and their mating behavior was investigated. The results indicate that migratory and sedentary biotypes interbred, and the number of males that completed copulation within three hours did not significantly differ between inter-biotype and intra-biotype mating. However, it took significantly longer for males to find a mate of another biotype than one of their own biotype. The duration of copulation of M 9 X S S was also significantly longer than that of M ♀ x M ♂ and S ♀ ×M♂. Mating was more likely to occur when the male and female were of the same biotype than when they were from different biotypes. There was a trend towards assortative mating between migratory and sedentary biotypes. Interbreeding occurred between cotton-specialized (Co) and cucurbits-specialized (Cu) biotypes, and the time required for males to find a mate and complete copulation were similar between Co ♀ × Cu ♂ cross and Cu ♀ × Co ♂ cross.%棉蚜Aphis gossypii Glover种群存在寄主利用和迁飞能力上的明显分化,有棉花型和瓜型、迁飞型和滞留型之分.但是,棉花型与瓜型之间,以及迁飞型与滞留型之间是否能发生交配行为,尚无研究报道.本文在低温和短光照条件下分别诱导棉花型、瓜型、迁飞型和滞留型棉蚜的性蚜,并进行性蚜间的交配行为观察.结果表明,迁飞型和滞留型性蚜间可以发生交配行为,杂交时发生交配行为的个体比率与自交时无显著差异,但是杂交时雄蚜寻

  5. 4株荚膜型流感嗜血杆菌分型情况的比较%Comparison of typing among 4 haemophilus influenzae isolates with capsule

    Institute of Scientific and Technical Information of China (English)

    王复甦; 占利; 杨婷婷; 姚苹苹; 徐宝祥; 叶菊莲

    2012-01-01

    Objective:To provide fundamental information about bacterial typing for Hi - associated diseases control. Methods:Serotypes, biotypes, PFGE types and MLST(Multilocus Sequence Typing) types of 4 Haemophilus influenzae capsule strains isolated from children under 5 years old were analyzed. Results: It was found that the 2 Hib isolates were biotype Ⅰ, the Hie isolate was biotype Ⅲ , and the Hia/f which was cross reacted with antisera a and f capsule types belonged to biotype Ⅰ . The similarity of PFGE pattern among the 4 capsule Hi isolates varied between 48. 8 % ~ 58. 5 % , and the two biotype I Hibs only 48. 8 % . The ST types of 2 Hibs with the same biotype Ⅰ were both ST95 ,while the biotype Ⅲ Hie was ST - 18. The biotype Ⅰ Hia/f maybe a new ST type, waiting for submitting and verification. Conclusion: The association among 4 capsuled Hi is comparatively weak, suggesting thare is no dominant capsuled Hi type among human group. PFGE can be used to identify the source of Hi strains with the same serotype and biotype.%目的:为预防和控制Hi相关疾病提供菌株分型资料.方法:分析比较4株从5岁以下幼儿中分离的荚膜型流感嗜血杆菌(Haemophilus influenzae,Hi)的血清分型、生物分型、脉冲场凝胶电泳(PFGE)和多位点序列分型(MLST)的结果.结果:4株荚膜型Hi中,2株Hib均为生物Ⅰ型;1株Hie为生物Ⅲ型;1株与a、f荚膜型抗血清有交叉凝集的Hia/f为生物Ⅰ型.4株PFGE型的相似度,为48.8% ~ 58.5%,其中,2株Hib菌株之间的相似度仅为48.8%;MLST分型,2株Ⅰ型Hib同为ST-95型,1株生物Ⅲ型的Hie为ST-18型,1株生物Ⅰ型的Hia/f可能为新的ST型,等待提交验证.结论:4株荚膜型Hi彼此间遗传关联度小,提示人群中尚未形成优势荚膜型Hi的聚集.Hi当菌株生物型和血清型相同时,PFGE能较好地区分不同来源的菌株.

  6. Unique activity spectrum of colicin FY: all 110 characterized Yersinia enterocolitica isolates were colicin FY susceptible.

    Science.gov (United States)

    Bosák, Juraj; Micenková, Lenka; Vrba, Martin; Ševčíková, Alena; Dědičová, Daniela; Garzetti, Debora; Šmajs, David

    2013-01-01

    Colicin FY is a plasmid encoded toxin that recognizes a yersinia-specific outer membrane protein (YiuR) as a receptor molecule. We have previously shown that the activity spectrum of colicin FY comprises strains of the genus Yersinia. In this study, we analyzed the activity of colicin FY against 110 Yersinia enterocolitica isolates differing in geographical origin and source. All isolates were characterized through analysis of 16S rRNA genes, serotyping, biotyping, restriction profiling of genomic DNA, detection of virulence markers and susceptibility to antibiotics. This confirmed the broad variability of the collection, in which all 110 Y. enterocolitica isolates, representing 77 various strains, were inhibited by colicin FY. Although isolates showed variable levels of susceptibility to colicin FY, it was not associated with any strain characteristic. The universal susceptibility of Y. enterocolitica strains to colicin FY together with the absence of activity towards strains outside the Yersinia genus suggests potential therapeutic applications for colicin FY.

  7. [Isolated yeast species in urine samples in a Spanish regional hospital].

    Science.gov (United States)

    Heras-Cañas, Victor; Ros, Luis; Sorlózano, Antonio; Gutiérrez-Soto, Blanca; Navarro-Marí, José María; Gutiérrez-Fernández, José

    2015-01-01

    Candiduria detection in hospitalized or immunocompromised patients is of great clinical significance. The aim of our study was to describe the isolation frequency of significant species of yeasts in urine samples processed in our hospital during the period 2010- 2013, and to analyze their susceptibility to commonly used antifungal agents. Species identification was performed by seeding on a chromogenic medium, the filamentation test and automated systems (ASM Vitek and MALDI Biotyper), while susceptibility was determined using the ASM Vitek system. Of the 632 yeast isolates in urine, 371 were Candida albicans species and 261 non-C. albicans Candida spp. The species with the highest number of resistant isolates were Candida glabrata and Candida krusei. Based on the results obtained, we believe that species identification and the susceptibility study should be current practice in the laboratories when species other than C. albicans are isolated.

  8. From phenotyping to the study of clonal relationship of microbial isolates

    Directory of Open Access Journals (Sweden)

    Carla Fontana

    2014-03-01

    Full Text Available The term “typing” is generally used with two meanings: a methods to establish the correct taxonomic collocation of a genus/specie/biotype, b methods for discriminating different bacterial isolates of the same species in order to establish the genetic relationship among the microorganisms involved in a possible outbreak. In this paper we focus our attention on the second aspect, that represents a relevant epidemiological tools in infection prevention and control. Typing systems are traditionally based on two steps workup: the first is the study of phenotypes such as serotype, biotype, phage-type, or antimicrobial susceptibilities of the isolates and this can be easily performed in every microbiology laboratory; the second, examines the relatedness of isolates at a molecular level. Over the years many molecular methods have been developed and efficiently applied in several hospital settings. The large panorama of methods put the microbiologists in trouble to operate the proper choice. Thus, in the present paper, we have reviewed old as well new molecular typing methods in order to provide a useful guide that can represent an overview on molecular methods and particularly of their specific pro and cons.

  9. Tomato pathogenesis-related protein genes are expressed in response to Trialeurodes vaporariorum and Bemisia tabaci biotype B feeding.

    Science.gov (United States)

    Puthoff, David P; Holzer, Frances M; Perring, Thomas M; Walling, Linda L

    2010-11-01

    The temporal and spatial expression of tomato wound- and defense-response genes to Bemisia tabaci biotype B (the silverleaf whitefly) and Trialeurodes vaporariorum (the greenhouse whitefly) feeding were characterized. Both species of whiteflies evoked similar changes in tomato gene expression. The levels of RNAs for the methyl jasmonic acid (MeJA)- or ethylene-regulated genes that encode the basic β-1,3-glucanase (GluB), basic chitinase (Chi9), and Pathogenesis-related protein-1 (PR-1) were monitored. GluB and Chi9 RNAs were abundant in infested leaves from the time nymphs initiated feeding (day 5). In addition, GluB RNAs accumulated in apical non-infested leaves. PR-1 RNAs also accumulated after whitefly feeding. In contrast, the ethylene- and salicylic acid (SA)-regulated Chi3 and PR-4 genes had RNAs that accumulated at low levels and GluAC RNAs that were undetectable in whitefly-infested tomato leaves. The changes in Phenylalanine ammonia lyase5 (PAL5) were variable; in some, but not all infestations, PAL5 RNAs increased in response to whitefly feeding. PAL5 RNA levels increased in response to MeJA, ethylene, and abscisic acid, and declined in response to SA. Transcripts from the wound-response genes, leucine aminopeptidase (LapA1) and proteinase inhibitor 2 (pin2), were not detected following whitefly feeding. Furthermore, whitefly infestation of transgenic LapA1:GUS tomato plants showed that whitefly feeding did not activate the LapA1 promoter, although crushing of the leaf lamina increased GUS activity up to 40 fold. These studies indicate that tomato plants perceive B. tabaci and T. vaporariorum in a manner similar to baterical pathogens and distinct from tissue-damaging insects.

  10. Biophysicochemical evaluation of wild hilly biotypes of Jatropha curcas for biodiesel production and micropropagation study of elite plant parts.

    Science.gov (United States)

    Verma, K C; Verma, S K

    2015-01-01

    Depleting reserves of fossil fuel and increasing effects of environmental pollution from petrochemicals demands eco-friendly alternative fuel sources. Jatropha curcas oil, an inedible vegetable oil, can be a substitute feedstock for traditional food crops in the production of environment-friendly and renewable fuel. Jatropha oil is looked up in terms of availability and cost and also has several applications and enormous economic benefits. The seed oils of various jatropha biotypes from hilly regions were screened out and evaluated for their physiochemical parameters, viz, seed index(520-600 g), oil content (15-42 %), biodiesel yield (71-98 %), moisture content (2.3-6.5 %), ash content (3.2-5.6 %), acid value (4.2-26), density (0.9172-0.9317 g/cm(3)), viscosity (5-37 mm(2)/s), saponification value (195.8-204.2 mg/g), iodine value (106.6-113.6 mg/g), flash point (162-235 °C), cetane value (46.70-50.06 °C), free fatty acid value (2.5-10.2 %), and refractive index (1.4600-1.4710). Fatty acid profiling of jatropha resembles as edible oilseeds. NAA with BAP was found to be superior for callus induction (up to 87 %), as well as for shoot regeneration (up to12 shoots). Root induction (90-100 %) was successfully obtained in MS medium with or without phytoregulators. Grown plantlets were successfully transferred from lab to field with a survival rate of 80 %.

  11. Resposta de biótipos de Euphorbia heterophylla a doses de glyphosate Response of Euphorbia heterophylla biotypes to glyphosate rates

    Directory of Open Access Journals (Sweden)

    L Vargas

    2011-01-01

    Full Text Available A leiteira (Euphorbia heterophylla é uma planta daninha de ciclo anual encontrada com frequência em lavouras de soja na região Sul do Brasil, controlada em lavouras de soja geneticamente modificada (Roundup Ready® - RR com uso do herbicida glyphosate. Entretanto, nos últimos anos, o controle dessa espécie não tem sido satisfatório em alguns locais, provocando a suspeita de que foram selecionados biótipos resistentes ao herbicida. Diante disso, o objetivo deste trabalho foi avaliar, por meio de curvas de dose-resposta, biótipos de leiteira com suspeita de resistência ao glyphosate. O experimento foi realizado em casa de vegetação, em delineamento experimental completamente casualizado, com quatro repetições. Os tratamentos constituíram-se de doses crescentes de glyphosate (0, 90, 180, 360, 720, 1.080, 1.440 e 2.160 g e.a. ha-1, aplicadas sobre cinco biótipos de leiteira, oriundos de lavouras de soja RR do Estado do Rio Grande do Sul. As variáveis avaliadas foram controle e matéria seca da parte aérea. Os resultados evidenciam que os biótipos de leiteira avaliados são suscetíveis ao glyphosate.Wild poinsettia is an annual cycle weed, commonly found in soybean crop in southern Brazil. It is controlled by glyphosate in genetically- modified soybean (Roundup Ready® - RR. The control of this species has not proven to be satisfactory in some places in the last years, leading to the suspicion that biotypes resistant to glyphosate have been selected. The objective this work was to evaluate, by response-dose curve, wild poinsettia biotypes with suspected resistance to glyphosate. The experiment was conducted under greenhouse conditions and the experiment was arranged in a randomized complete block design, with four replications. The treatments consisted of increased application rates of glyphosate (0, 90, 180, 360, 720, 1,080, 1,440 and 2,160 g a.e. ha-1 on five wild poinsettia biotypes, from crop soybean RR in the state of Rio

  12. Molecular Characterisation of Salmonella enterica Serovar Typhi Isolated from Typhoidial Humans

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    Arunava Das

    2012-09-01

    Full Text Available Aims: Salmonella enterica serovar Typhi is the major causative agent for typhoidial fever around the globe among human population reported till date. Present research work was carried out for detection and molecular characterisation of Salmonella enterica serovar Typhi isolated from humans with Typhoidial fever by biochemical, phenotypical and virulence gene based polymerase chain reaction (PCR techniques. The isolated strains were also investigated for antibiotic susceptibility patterns as a control measure. Methodology and Results: A total of 16 clinical samples were collected from the same numbers of patients (7 males and 9 females from Coimbatore, Erode and Salem districts of Tamil Nadu and were processed via broth enrichment methods for isolation and identification of the causative agent S. enterica serovar Typhi. Microbiological and biochemical investigations revealed the presence of S. Typhi from 16 samples. The biotyping of the isolates showed that all the isolates belonged to biotype IV. The PCR analysis confirmed the presence of invA (Invasion gene, 244bp, tyv (Tyveloseepimerase gene, 615 bp, fliC-d (Phage-1 flagellin gene for d-antigen, 750 bp and viaB (Vi antigen gene, 439bp in all 16 clinical samples. The antibiotic susceptibility test that was carried out among the isolates against 12 antimicrobial agents, showed 100 % resistance to only ampicillin and 100 % sensitivity to carbenicillin, chloramphenicol, clindamycin, gentamycin, kanamycin and tetracycline.Conclusion, significance and impact of study: This study confirmed the association of virulent strains of S. enterica serovar Typhi from Typhoidial fever among human population and suggested that PCR based diagnostic could be very useful for the rapid detection of S. Typhi isolates. Present study emphasized the use of antibiotic like chloramphenicol or in combination with other antibiotics for the effective control of S. Typhi.

  13. Silicon influence on resistance induction against Bemisia tabaci biotype B (Genn.) (Hemiptera: Aleyrodidae) and on vegetative development in two soybean cultivars.

    Science.gov (United States)

    Ferreira, R S; Moraes, J C; Antunes, C S

    2011-01-01

    The potential of populations of Bemisia tabaci (Genn.) to become resistant to insecticides has stimulated research into alternative tactics of integrated pest management such as the induction of host-plant resistance. Recent data have shown that silicon can increase the degree of resistance of host plants to insect pests. Therefore the aim of our work was to study the effects of silicon application on the vegetative development of soybean plants and on the induction of resistance to the silverleaf whitefly, B. tabaci biotype B. We performed choice and no-choice tests of oviposition preference on two soybean cultivars, IAC-19 (moderately resistant to B. tabaci biotype B) and MONSOY-8001 (susceptible), with and without application of silicon. Silicon did not affect silverleaf whitefly oviposition preferences, but caused significant mortality in nymphs. Thus, silicon increased the degree of resistance to silverleaf whitefly. Silicon decreased the production of phenolic compounds, but did not affect lignin production. However, when applied to cultivar IAC-19, it increased the production of non-protein organic nitrogen. Silicon had no effect on the vegetative development of soybean plants, but it increased the degree of resistance to the silverleaf whitefly. We conclude that silicon applications combined with cultivar IAC-19 can significantly decrease silverleaf whitefly populations, having a positive impact both on the soybean plant and on the environment.

  14. Clinical significance and evaluation methods of gingival biotype%牙龈生物型的临床意义和评估方法

    Institute of Scientific and Technical Information of China (English)

    张瑞

    2013-01-01

    牙龈组织的形态因人而异,不同形态的牙龈在经过口腔的各种治疗后会有不同的结果和预后.因此在口腔治疗之前,对牙龈形态的评估逐渐为各个学科所重视.Oschenbein等针对牙龈的不同形态提出了“厚”与“薄”牙龈生物型的概念,随后许多学者均对牙龈生物型进行了相应的研究并取得了一定的成果,对牙龈生物型的评估和检测方法已有多种.本文就牙龈生物型的临床意义和评估方法作一综述.%Gingival morphology might be individually different , and it the plays an important role in oral treatments. Attention shoud be paid to the character of gingival form. Oschenbein described the various forms of gingiva and gave the concept of gingival biotypt including two basic types; "thick" and "thin" . Several study obtained various conclusions. The gingival biotype may be related to the methods of periodontal treatment. The clinical significance and evaluation methods of gingival biotype are summarized in this paper.

  15. Isolation and Classification of Fungal Whitefly Entomopathogens from Soils of Qinghai-Tibet Plateau and Gansu Corridor in China.

    Science.gov (United States)

    Dong, Tingyan; Zhang, Bowen; Jiang, Yanfang; Hu, Qiongbo

    2016-01-01

    Qinghai-Tibet Plateau and Gansu Corridor of China with distinct geographic and climatic conditions are remote and less disturbed by humans, in which are likely to find some new strains of fungal entomopathogens against B-biotype whiteflies that is a very important invading pest worldwide. In this research, nineteen strains among six species of entomogenous fungi were isolated from the soil samples collected from 32 locations in Qinghai-Tibet Plateau and Gansu Corridor. From the data of isolation rates, it was indicated that the good biodiversity of entomogenous fungi was found in the soil covered good vegetations. On the contrary, no strains were isolated from the desert areas. In addition, the dominant species, Isaria fumosorosea and Metarhizium anisopliae var. anisopliae in the Qinghai-Tibet Plateau are different from the strains of other places based on ITS genetic homology analysis. It was verified that the Qinghai-Tibet Plateau area was less disturbed by human, and the fungi in this place exchanged less compared with other regional species. All of these strains showed the pathogenicity against the B-biotype whitefly with the mortality of more than 30%. However, a few strains of Paecilomyces lilacinus, Lecanicillium psalliotae, Aspergillus ustus, I. fumosorosea and M. anisopliae var. anisopliae had better virulence with LC50s of 0.36-26.44×106 spores/mL on post-treatment day 6-7. Especially, the L. psalliotae strain LpTS01 was the greatest virulence with LC50 of 0.36×106spores/mL and LT50 of 4.23d. Our research thus presents some new insights to discover new entomopathogenic fungal strains used for B-biotype whitefly biocontrol.

  16. Isolation and Classification of Fungal Whitefly Entomopathogens from Soils of Qinghai-Tibet Plateau and Gansu Corridor in China.

    Directory of Open Access Journals (Sweden)

    Tingyan Dong

    Full Text Available Qinghai-Tibet Plateau and Gansu Corridor of China with distinct geographic and climatic conditions are remote and less disturbed by humans, in which are likely to find some new strains of fungal entomopathogens against B-biotype whiteflies that is a very important invading pest worldwide. In this research, nineteen strains among six species of entomogenous fungi were isolated from the soil samples collected from 32 locations in Qinghai-Tibet Plateau and Gansu Corridor. From the data of isolation rates, it was indicated that the good biodiversity of entomogenous fungi was found in the soil covered good vegetations. On the contrary, no strains were isolated from the desert areas. In addition, the dominant species, Isaria fumosorosea and Metarhizium anisopliae var. anisopliae in the Qinghai-Tibet Plateau are different from the strains of other places based on ITS genetic homology analysis. It was verified that the Qinghai-Tibet Plateau area was less disturbed by human, and the fungi in this place exchanged less compared with other regional species. All of these strains showed the pathogenicity against the B-biotype whitefly with the mortality of more than 30%. However, a few strains of Paecilomyces lilacinus, Lecanicillium psalliotae, Aspergillus ustus, I. fumosorosea and M. anisopliae var. anisopliae had better virulence with LC50s of 0.36-26.44×106 spores/mL on post-treatment day 6-7. Especially, the L. psalliotae strain LpTS01 was the greatest virulence with LC50 of 0.36×106spores/mL and LT50 of 4.23d. Our research thus presents some new insights to discover new entomopathogenic fungal strains used for B-biotype whitefly biocontrol.

  17. Isolation and Classification of Fungal Whitefly Entomopathogens from Soils of Qinghai-Tibet Plateau and Gansu Corridor in China

    Science.gov (United States)

    Jiang, Yanfang; Hu, Qiongbo

    2016-01-01

    Qinghai-Tibet Plateau and Gansu Corridor of China with distinct geographic and climatic conditions are remote and less disturbed by humans, in which are likely to find some new strains of fungal entomopathogens against B-biotype whiteflies that is a very important invading pest worldwide. In this research, nineteen strains among six species of entomogenous fungi were isolated from the soil samples collected from 32 locations in Qinghai-Tibet Plateau and Gansu Corridor. From the data of isolation rates, it was indicated that the good biodiversity of entomogenous fungi was found in the soil covered good vegetations. On the contrary, no strains were isolated from the desert areas. In addition, the dominant species, Isaria fumosorosea and Metarhizium anisopliae var. anisopliae in the Qinghai-Tibet Plateau are different from the strains of other places based on ITS genetic homology analysis. It was verified that the Qinghai-Tibet Plateau area was less disturbed by human, and the fungi in this place exchanged less compared with other regional species. All of these strains showed the pathogenicity against the B-biotype whitefly with the mortality of more than 30%. However, a few strains of Paecilomyces lilacinus, Lecanicillium psalliotae, Aspergillus ustus, I. fumosorosea and M. anisopliae var. anisopliae had better virulence with LC50s of 0.36–26.44×106 spores/mL on post-treatment day 6–7. Especially, the L. psalliotae strain LpTS01 was the greatest virulence with LC50 of 0.36×106spores/mL and LT50 of 4.23d. Our research thus presents some new insights to discover new entomopathogenic fungal strains used for B-biotype whitefly biocontrol. PMID:27228109

  18. Competitividade de biótipos de capim-arroz resistente e suscetível ao quinclorac Competitiveness of echinochloa biotypes resistant and susceptible to quinclorac

    Directory of Open Access Journals (Sweden)

    G. Concenço

    2008-03-01

    Full Text Available Objetivou-se com este trabalho avaliar a competitividade de dois biótipos de capim-arroz, resistente e suscetível ao quinclorac, coletados em regiões orizícolas do Estado de Santa Catarina. O experimento foi instalado em ambiente protegido, e os tratamentos constaram de diferentes densidades de plantas dos biótipos de capim-arroz comprovadamente resistente (ITJ-13 e suscetível (ITJ-17 ao quinclorac, oriundos da região arrozeira de Itajaí/SC. No centro da unidade experimental, foram semeadas três sementes do biótipo de capim-arroz, considerado como o tratamento da unidade experimental. Na periferia foram semeadas dez sementes do biótipo oposto ao do tratamento (central. Dez dias após a germinação foi efetuado o desbaste, deixando-se apenas uma planta no centro da unidade experimental e um número variável de plantas do biótipo oposto, de acordo com o tratamento (0, 1, 2, 3, 4 ou 5 plantas por vaso. O delineamento experimental utilizado foi o completamente casualizado, em esquema fatorial 2 x 6, com quatro repetições. Aos 40 dias após a emergência, foram avaliados altura de plantas, número de afilhos e de folhas, área foliar, massa fresca e seca e conteúdo de água de colmos e folhas. Os dados foram analisados pelo teste F, sendo efetuado teste de Duncan para comparar o efeito de densidade de plantas e teste da Diferença Mínima Significativa (DMS para avaliar diferenças entre os biótipos resistente e suscetível, além de correlação linear simples entre as variáveis avaliadas. Nas análises, utilizou-se o nível de 5% de probabilidade. Os biótipos estudados de capim-arroz resistente e suscetível ao quinclorac são similares quando sob alta intensidade de competição, com vantagem em algumas variáveis para o biótipo suscetível sob baixa ou moderada intensidade competitiva.The objective of this research was to evaluate the competitive potential of two Echinochloa sp. biotypes, resistant and susceptible to

  19. Strategy for rapid identification and antibiotic susceptibility testing of gram-negative bacteria directly recovered from positive blood cultures using the Bruker MALDI Biotyper and the BD Phoenix system.

    Science.gov (United States)

    Wimmer, Jana L; Long, S Wesley; Cernoch, Patricia; Land, Geoffrey A; Davis, James R; Musser, James M; Olsen, Randall J

    2012-07-01

    Decreasing the time to species identification and antibiotic susceptibility determination of strains recovered from patients with bacteremia significantly decreases morbidity and mortality. Herein, we validated a method to identify Gram-negative bacteria directly from positive blood culture medium using the Bruker MALDI Biotyper and to rapidly perform susceptibility testing using the BD Phoenix.

  20. Resistência ao glyphosate em biótipos de Conyza bonariensis e Conyza canadensis no Estado do Rio Grande do Sul, Brasil Resistance to glyphosate in Conyza bonariensis and Conyza canadensis biotypes in Rio Grande do Sul, Brazil

    Directory of Open Access Journals (Sweden)

    F.P. Lamego

    2008-06-01

    Full Text Available Experimentos de curva de dose-resposta foram conduzidos para avaliar a ocorrência de resistência ao glyphosate em biótipos de Conyza canadensis e Conyza bonariensis oriundos de municípios do Rio Grande do Sul. Para cada espécie foi realizado um experimento com dois biótipos um suscetível e outro com suspeita de resistência. Glyphosate nas doses de 0, 100, 200, 300, 400, 800 e 1.200 g ha-1 foi aplicado em plantas no estádio de 8-10 folhas. Curvas sigmoidais foram ajustadas para todos os biótipos testados. Confirmou-se a resistência ao glyphosate em biótipos de ambas as espécies, com fator de resistência em torno de 2,3.Dose-response experiments were conducted to evaluate the occurrence of resistance to glyphosate in Conyza canadensis and Conyza bonariensis biotypes originated from Rio Grande do Sul counties. For each species, one experiment was conducted with two biotypes, one susceptible and one suspected of resistance. Glyphosate rates of 0, 100, 200, 300, 400, 800 and 1200 g ha-1 were sprayed on the plants after reaching the 8-10 leaf growth stage. Sigmoidal curves were adjusted to each biotype tested. Resistance to glyphosate was confirmed for biotypes of both species with resistance factor of 2.3.

  1. Inducible Siphoviruses in superficial and deep tissue isolates of Propionibacterium acnes

    Directory of Open Access Journals (Sweden)

    Rasmussen Magnus

    2008-08-01

    Full Text Available Abstract Background Propionibacterium acnes is a commensal of human skin but is also known to be involved in certain diseases, such as acne vulgaris and infections of orthopaedic implants. Treatment of these conditions is complicated by increased resistance to antibiotics and/or biofilm formation of P. acnes bacteria. P. acnes can be infected by bacteriophages, but until recently little has been known about these viruses. The aim of this study was to identify and characterize inducible phages from P. acnes on a genetic and morphological basis. Results More than 70% (65/92 of P. acnes isolates investigated have inducible phages, classified morphologically as Siphoviruses. The phages have a head of 55 nm in diameter and a tail of 145–155 nm in length and 9–10 nm in width. There was no difference in carriage rate of phages between P. acnes isolates from deep infections and isolates from skin. However, there was a significant lower carriage rate of phages in P. acnes biotype IB, mostly attributed to the low carriage rate of inducible phages in biotype IB isolated from deep tissue. Most phages have a strong lytic activity against all P. acnes isolates with inducible phages, but have less lytic activity against isolates that have no prophages. Phages only infected and lysed P. acnes and not other closely related propionibacteria. All phages could infect and lyse their non-induced parental host, indicating that these prophages do not confer superinfection immunity. The phages have identical protein pattern as observed on SDS-PAGE. Finally, sequencing of two phage genes encoding a putative major head protein and an amidase and showed that the phages could be divided into different groups on a genetic basis. Conclusion Our findings indicate that temperate phages are common in P. acnes, and that they are a genetically and functionally homogeneous group of Siphoviruses. The phages are specific for P. acnes and do not seem to confer superinfection

  2. Genetic and antigenic heterogeneity among feline calicivirus isolates from distinct disease manifestations.

    Science.gov (United States)

    Geissler, K; Schneider, K; Platzer, G; Truyen, B; Kaaden, O R; Truyen, U

    1997-05-01

    The capsid protein genes of five feline calicivirus (FCV) isolates associated with different disease manifestations were cloned and sequenced. The viruses represented two recent isolates from cats with chronic stomatitis, one recent isolate from a cat with acute stomatitis, one recent isolate each from a cat with acute respiratory symptoms and the classical limping syndrome strain FCV-2280. The amino acid sequences were compared with eight other published sequences and analyzed for their relationships. Phylogenetic analysis of the complete capsid protein sequences or of known antigenic regions of that protein (hypervariable regions A and E) did not group the isolates of different disease manifestations in distinct subclusters. Monoclonal antibodies (MAbs) generated against either a chronic stomatitis isolate or a recent isolate associated with respiratory symptoms were tested against a panel of 11 recent isolates and four "classical' FCV strains, covering all known disease associations. With those MAbs no obvious clustering with respect to disease manifestation could be seen. Four specific sera prepared in rabbits against our prototype isolates also failed to cluster those isolates according to the disease manifestations when examined in neutralization tests. From these antigenic and genetic analyses of the capsid protein the hypothesis of the existence of biotypes of FCV responsible for distinct disease manifestations could not be confirmed.

  3. Buva (Conyza bonariensis resistente ao glyphosate na região sul do Brasil Conyza bonariensis biotypes resistant to the glyphosate in southern Brazil

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    L. Vargas

    2007-09-01

    com mecanismo de ação distinto daquele do glyphosate. Entretanto, o biótipo resistente mostra baixa resposta ao herbicida glyphosate, mesmo se este for empregado em doses elevadas, evidenciando ter adquirido resistência a esse produto.Glyphosate is a non-selective herbicide used for over 20 years to control weeds in Rio Grande do Sul. Horseweed (Conyza bonariensis is a common weed in Rio Grande do Sul and traditionally sensitive to glyphosate. However, during the last years, some horseweed plants have not shown significant injury symptoms after treatment with glyphosate, suggesting that they are resistant to this herbicide. Aiming to evaluate the response of a population of horseweed plants to glyphosate, one field and two greenhouse experiments were carried out. The field experiment treatment had increasing rates of glyphosate (0, 360, 720, 1,440, 2,880 and 5,760 g ha-1, and also the herbicides paraquat and 2,4-D as standards. The greenhouse experiments had increasing rates of glyphosate (0, 360, 720, 1,440, 2,880 and 5,760 g ha-1 plus the above listed check herbicides sprayed on biotypes considered resistant and on plants of one susceptible biotype. In the second greenhouse experiment, the treatments were increasing rates of glyphosate (720, 1,440 and 2,880 g ha-1 and herbicides chlorimuron-ethyl, metsulfuron-methyl, 2,4-D, paraquat and diuron + paraquat sprayed on plants of resistant and susceptible biotypes. Horseweed control was accessed at 7, 15 and 30 DAT (days after treatment. Overall results of the field and greenhouse experiments provided evidence that the susceptible biotype is easily controlled by glyphosate and the other tested herbicides. In addition, the results demonstrated that the resistant biotype, as the susceptible biotype, is highly sensitive to herbicides with mode of action that differs from glyphosate. However, the resistant biotype showed low response to glyphosate, even at very high rates, confirming resistance of this horseweed

  4. Glyphosate translocation in hairy fleabane (Conyza bonariensis biotypes Translocação do glyphosate em biótipos de buva (Conyza bonariensis

    Directory of Open Access Journals (Sweden)

    E.A. Ferreira

    2008-01-01

    Full Text Available The objective of this work was to evaluate the translocation of glyphosate in C. bonariensis plants resistant and susceptible to that herbicide. The 14C-glyphosate was mixed with commercial gyhphosate (800 g ha-1 and applied on the center of the adaxial face of a third node leaf, using a micro syringe, and adding 10 µL of a solution with specific activity of 1,400 Bq, 45 days after plant emergence. The concentration of the glyphosate translocated in the plant was evaluated at time intervals of 6, 12, 36 and 72 hours after being applied on the application leaf, stem, roots and leaves. Ten hours after treatment application, the distribution of the product in the application leaf, divided into base, center and apex, was also evaluated by measuring the radiation emitted by 14C-glyphosate in a liquid scintillation spectrometer. Greater glyphosate retention was observed in the resistant biotype leaf, approximately 90% of the total absorbed up to 72 hours. In the susceptible biotype, this value was close to 70% in the same period. Susceptible biotype leaves, stem and roots showed greater concentration of glyphosate, indicating greater translocation efficiency in this biotype. In the resistant biotype, the herbicide accumulated in greater quantity at the apex and center of the application leaf, while in the susceptible biotype greater accumulation was observed at the base and center leaf. Thus, it can be stated that the resistance mechanism is related to the differential translocation of this herbicide in the biotypes.Objetivou-se com este trabalho avaliar a translocação do glyphosate em plantas de C. bonariensis resistentes e suscetíveis a esse herbicida. Para isso aplicou-se o 14C-glyphosate em mistura com glyphosate comercial (800 g ha-1 sobre o centro da face adaxial da folha do terceiro nó, utilizando-se uma microsseringa, adicionando-se 10 µL da calda com atividade específica de 1.400 Bq, aos 45 dias após a emergência da buva. A concentra

  5. Shotgun sequencing of Yersinia enterocolitica strain W22703 (biotype 2, serotype O:9: genomic evidence for oscillation between invertebrates and mammals

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    Starke Mandy

    2011-03-01

    Full Text Available Abstract Background Yersinia enterocolitica strains responsible for mild gastroenteritis in humans are very diverse with respect to their metabolic and virulence properties. Strain W22703 (biotype 2, serotype O:9 was recently identified to possess nematocidal and insecticidal activity. To better understand the relationship between pathogenicity towards insects and humans, we compared the W22703 genome with that of the highly pathogenic strain 8081 (biotype1B; serotype O:8, the only Y. enterocolitica strain sequenced so far. Results We used whole-genome shotgun data to assemble, annotate and analyse the sequence of strain W22703. Numerous factors assumed to contribute to enteric survival and pathogenesis, among them osmoregulated periplasmic glucan, hydrogenases, cobalamin-dependent pathways, iron uptake systems and the Yersinia genome island 1 (YGI-1 involved in tight adherence were identified to be common to the 8081 and W22703 genomes. However, sets of ~550 genes revealed to be specific for each of them in comparison to the other strain. The plasticity zone (PZ of 142 kb in the W22703 genome carries an ancient flagellar cluster Flg-2 of ~40 kb, but it lacks the pathogenicity island YAPIYe, the secretion system ysa and yts1, and other virulence determinants of the 8081 PZ. Its composition underlines the prominent variability of this genome region and demonstrates its contribution to the higher pathogenicity of biotype 1B strains with respect to W22703. A novel type three secretion system of mosaic structure was found in the genome of W22703 that is absent in the sequenced strains of the human pathogenic Yersinia species, but conserved in the genomes of the apathogenic species. We identified several regions of differences in W22703 that mainly code for transporters, regulators, metabolic pathways, and defence factors. Conclusion The W22703 sequence analysis revealed a genome composition distinct from other pathogenic Yersinia enterocolitica

  6. Yersinia enterocolitica: Mode of Transmission, Molecular Insights of Virulence, and Pathogenesis of Infection

    Directory of Open Access Journals (Sweden)

    Yeasmin Sabina

    2011-01-01

    Full Text Available Although Yersinia enterocolitica is usually transmitted through contaminated food and untreated water, occasional transmission such as human-to-human, animal-to-human and blood transfusion associated transmission have also identified in human disease. Of the six Y. enterocolitica biotypes, the virulence of the pathogenic biotypes, namely, 1B and 2–5 is attributed to the presence of a highly conserved 70-kb virulence plasmid, termed pYV/pCD and certain chromosomal genes. Some biotype 1A strains, despite lacking virulence plasmid (pYV and traditional chromosomal virulence genes, are isolated frequently from humans with gastrointestinal diseases similar to that produced by isolates belonging known pathogenic biotypes. Y. enterocolitica pathogenic biotypes have evolved two major properties: the ability to penetrate the intestinal wall, which is thought to be controlled by plasmid genes, and the production of heat-stable enterotoxin, which is controlled by chromosomal genes.

  7. Glyphosate no controle de biótipos de azevém e impacto na microbiota do solo Glyphosate application for italian ryegrass biotype control and impact on soil microbiota

    Directory of Open Access Journals (Sweden)

    E.A. Ferreira

    2006-09-01

    Full Text Available Avaliou-se neste trabalho a resistência de azevém (L. multiflorum ao glyphosate e o impacto do controle desses biótipos sobre a respiração e biomassa microbiana do solo. Foram conduzidos dois ensaios: no primeiro foram avaliadas a intoxicação e a massa seca das plantas de biótipos de três populações de azevém: população 1 (reconhecidamente resistente, população 2 (resistência intermediária, e população 3 (sensível ao glyphosate, submetidas a diferentes doses de glyphosate (200, 400, 800, 1.600 e 3.200 g ha-1. No segundo ensaio foram avaliados a massa seca da parte aérea, a altura de plantas, o número de folhas de azevém e a respiração e massa microbiana do solo cultivado com os biótipos resistente e sensível, com e sem aplicação de glyphosate (480 g ha-1. Aos 14 DAT, observou-se morte do biótipo sensível quando tratado com doses a partir de 200 g ha-1 de glyphosate. Nos biótipos resistentes e com nível intermediário de resistência, a toxicidade do glyphosate às plantas de azevém foi de 85% na maior dose avaliada. O biótipo resistente apresentou maior produção de massa seca da parte aérea aos 42 DAT e na rebrota, aos 72 DAT, quando comparado ao biótipo intermediário. O biótipo sensível apresentou maior altura de plantas, número de folhas e massa seca da parte aérea, em comparação ao resistente, quando não tratados com o glyphosate. Não foi observada diferença na atividade microbiana do solo entre os tratamentos avaliados.This study aimed to evaluate the resistance Italian ryegrass (L. multiflorum against glyphosate and the impact of the control of these biotypes on soil respiration and microbial biomass. Two essays were conducted: the first evaluated intoxication and dry mass of the plants of biotypes of three Italian ryegrass population (population 1 - resistant; population 2 - intermediary resistance; and population 3 - sensitive to glyphosate submitted to different glyphosate rates. The

  8. Distinguishing suitable biotypes of Dactylopius tomentosus (Hemiptera: Dactylopiidae) for biological control of Cylindropuntia fulgida var. fulgida (Caryophyllales: Cactaceae) in South Africa.

    Science.gov (United States)

    Mathenge, C W; Holford, P; Hoffmann, J H; Zimmermann, H G; Spooner-Hart, R; Beattie, G A C

    2009-12-01

    Cylindropuntia fulgida (Engelmann) F.M. Knuth var. fulgida (Engelmann) F.M. Knuth (Cff) (Caryophyllales: Cactaceae) is native to Mexico and Arizona and was introduced into South Africa for ornamental purposes. It subsequently became highly invasive, necessitating control. The cochineal insect, Dactylopius tomentosus (Lamarck) (Hemiptera: Dactylopiidae), was selected as a potential biological control agent based on its restricted host range among Cylindropuntia species and previous success in controlling C. imbricata (DC.) F. Knuth (Ci). Eight D. tomentosus provenances (Cholla, Cholla E, Fulgida, Mamillata, Imbricata, Tunicata U, Tunicata V and Rosea) from Cylindropuntia species in their native ranges were reared on Cff, whilst Cholla and Imbricata were also reared on Ci. Large differences were found in the development and survival of crawlers, and in the reproductive capacity of females. Three subjective categories of provenance interaction with host plants were identified based on a fitness index (FI) calculated from data relating to crawler survival, female development time and fecundity: (i) thriving (FI > or = 1) - insects had shorter developmental times, high crawler survival and highly fecund females (Cholla); (ii) surviving (FI0) - insects had extended development times, low crawler survival and low fecundity (Imbricata, Fulgida and Mamillata); and (iii) dying (FI = 0) - insects died before or at the second instar (Rosea, Tunicata U and Tunicata V). Cholla, therefore, is highly suitable for biological control of Cff in South Africa. In addition, Cholla thrived on Cff but only survived on Ci whilst, in contrast, Imbricata thrived on Ci but only survived on Cff. This differential ability of provenances to thrive or survive on different host plants demonstrated that host adapted biotypes of D. tomentosus exist; therefore, biotypes should be taken into account when considering this species as a biological control agent of cactus weeds.

  9. Flower-bud formation in explants of photoperiodic and day-neutral Nicotiana biotypes and its bearing on the regulation of flower formation

    Energy Technology Data Exchange (ETDEWEB)

    Rajeevan, M.S.; Lang, A. (Michigan State Univ., East Lansing (United States))

    1993-05-15

    The capacity to form flower buds in thin-layer explants was studied in Nicotiana of several species, cultivars, and lines of differing in their response to photoperiod. This capacity was found in all biotypes examined and could extend into sepals and corolla. It varied depending on genotype, source tissue and its developmental state, and composition of the culture medium, particularly the levels of glucose, auxin, and cytokinin. It was greatest in the two day-neutral plants examined, Samsun tobacco and Nicotiana rustica, where it extended from the inflorescence region down the vegetative stem, in a basipetally decreasing gradient; it was least in the two qualitative photoperiodic plants studied, the long-day plant Nicotiana silvestris and the short-day plant Maryland Mammoth tobacco, the quantitative long-day plant Nicotiana alata and the quantitative short-day plant Nicotiana otophora line 38-G-81, where it was limited to the pedicels (and, in some cases, the sepals). Regardless of the photoperiodic response of the source plants, the response was the same in explants cultured under long and short days. The capacity to form flow buds in explants is present in all Nicotiana biotypes studied supports the idea that it is regulated by the same mechanism(s), regardless of the plant's photoperiodic character. However, flower formation in the explants is not identical with de novo flower formation in a hitherto vegetative plant: it is rather the expression of a floral state already established in the plant, although it can vary widely in extent and spatial distribution. Culture conditions that permit flower-bud formation in an explant are conditions that maintain the floral state and encourage its expression; conditions under which no flower buds are formed reduce this state and/or prevent its expression. 14 refs., 5 figs., 3 tabs.

  10. Aryl hydrocarbon hydroxylase represents CYP1B1, and not CYP1A1, in human freshly isolated white cells: trimodal distribution of Japanese population according to induction of CYP1B1 mRNA by environmental dioxins.

    Science.gov (United States)

    Toide, Kenji; Yamazaki, Hiroshi; Nagashima, Rikako; Itoh, Keisuke; Iwano, Shunsuke; Takahashi, Yoshiki; Watanabe, Shaw; Kamataki, Tetsuya

    2003-03-01

    The expression level of mRNAs for cytochrome P450 (CYP) 1A1 and 1B1 in freshly prepared white cells from 72 subjects exposed to dioxins at waste incinerators was investigated. The amounts of CYP1B1 mRNA ranged from 0.16 to 671 molecules/10(7) molecules of 18S rRNA, whereas the amounts of CYP1A1 mRNA were dioxins. The inducibility of CYP1B1 mRNA in leukocytes, defined as the ratio of CYP1B1 mRNA to the plasma concentration of dioxins, varied among the subjects. It was found that the subjects showed trimodal distribution according to inducibility: 39 (54.2%), 25 (34.7%), and 8 (11.1%) of 72 subjects were judged as poor, intermediate, and high responders to environmental dioxins, respectively. The amounts of CYP1B1 mRNA in leukocytes of the intermediate and high responders were highly correlated with the plasma concentrations of dioxins (P dioxins is involved in aromatic hydrocarbon hydroxylase activities in human lymphocytes.

  11. Salmonella typhi: lisotipia VI e biotipificação em amostras oriundas de algumas regiões do Brasil Salmonella typhi: lysotype VI and biotyping in sample from some regions of Brazil

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    Ernesto Hofer

    1984-03-01

    Full Text Available Fez-se uma análise da distribuicão da frequência dos lisotipos VI e dos tipos fermentativos segundo o esquema de Kristensen, em 1.150 amostras de Salmonella typhi, isoladas de diferentes regiões do Brasil (Pará, Pernambuco, Bahia, Minas Gerais, Rio de Janeiro, São Paulo e Rio Grande do Sul. No computo geral, observou-se a prevalência dos lisotipos A (38,1%; Ela (18,9%; amostras VI negativas (16,6%; D6 (8,7% I + IV (4,6%; T (2,3% e C1 (2,1% e a ocorrência de alguns tipos fágicos característicos para determinadas áreas (B3, C4 e 40 na Bahia; E1b, F2, G1 e L1 em São Paulo; E4 e 28 no Rio de Janeiro. Quanto a classificacão bioquímica, 55,2% das amostras caracterizaram-se no biotipo II (xilose e arabinose negativas, 44,2% no tipo fermentativo I (xilose positiva e arabinose negativas e 0,52% no tipo III (xilose e arabinose positivas, respectivamente.The frequency of Vi-phage types and fermentative types according to Kristensen's scheme was studied among 1,150 strains of Salmonella typhi isolated from different areas in Brazil (states of Pará, Pernambuco, Bahia, Minas Gerais, Rio de Janeiro, São Paulo and Rio Grande do Sul. The most prevalent phage types encountered in this study were: A (38.1%; Ela (18.9%, D6 (8.7%, T (2.3% and C1 (2.1%, including categories of untypable strains (group I + IV-4.6%, and Vi negative (16.6%. There was,however, some types characteristics of particular areas (B3, C4, 40 from Bahia; Elb, F2,G1, L1 from São Paulo; E4 and 28 from Rio de Janeiro. In respect to the biochemical classification, 55.2% of the strains were classified as a biotype II (xylose and arabinose negative, 44,2% as of type I (xylose positive and negative0 and 0.52% as a type III (xylose and arabinose positive, respectively.

  12. Isolation and characterization of TgVP1, a type I vacuolar H+-translocating pyrophosphatase from Toxoplasma gondii. The dynamics of its subcellular localization and the cellular effects of a diphosphonate inhibitor.

    Science.gov (United States)

    Drozdowicz, Yolanda M; Shaw, Michael; Nishi, Manami; Striepen, Boris; Liwinski, Helene A; Roos, David S; Rea, Philip A

    2003-01-10

    Here we report the isolation and characterization of a type I vacuolar-type H(+)-pyrophosphatase (V-PPase), TgVP1, from an apicomplexan, Toxoplasma gondii, a parasitic protist that is particularly amenable to molecular and genetic manipulation. The 816-amino acid TgVP1 polypeptide is 50% sequence-identical (65% similar) to the prototypical type I V-PPase from Arabidopsis thaliana, AVP1, and contains all the sequence motifs characteristic of this pump category. Unlike AVP1 and other known type I enzymes, however, TgVP1 contains a 74-residue N-terminal extension encompassing a 42-residue N-terminal signal peptide sequence, sufficient for targeting proteins to the secretory pathway of T. gondii. Providing that the coding sequence for the entire N-terminal extension is omitted from the plasmid, transformation of Saccharomyces cerevisiae with plasmid-borne TgVP1 yields a stable and functional translation product that is competent in aminomethylenediphosphonate (AMDP)-inhibitable K(+)-activated pyrophosphate (PP(i)) hydrolysis and PP(i)-energized H(+) translocation. Immunofluorescence microscopy of both free and intracellular T. gondii tachyzoites using purified universal V-PPase polyclonal antibodies reveals a punctate apical distribution for the enzyme. Equivalent studies of the tachyzoites during host cell invasion, by contrast, disclose a transverse radial distribution in which the V-PPase is associated with a collar-like structure that migrates along the length of the parasite in synchrony with and in close apposition to the penetration furrow. Although treatment of T. gondii with AMDP concentrations as high as 100 microm had no discernible effect on the efficiency of host cell invasion and integration, concentrations commensurate with the I(50) for the inhibition of TgVP1 activity in vitro (0.9 microm) do inhibit cell division and elicit nuclear enlargement concomitant with the inflation and eventual disintegration of acidocalcisome-like vesicular structures. A

  13. Identification of Haemophilus influenzae Type b Isolates by Use of Matrix-Assisted Laser Desorption Ionization–Time of Flight Mass Spectrometry

    Science.gov (United States)

    Månsson, Viktor; Kostrzewa, Markus; Nilson, Bo; Riesbeck, Kristian

    2015-01-01

    Haemophilus influenzae type b (Hib) is, in contrast to non-type b H. influenzae, associated with severe invasive disease, such as meningitis and epiglottitis, in small children. To date, accurate H. influenzae capsule typing requires PCR, a time-consuming and cumbersome method. Matrix-assisted laser desorption ionization–time of flight mass spectrometry (MALDI-TOF MS) provides rapid bacterial diagnostics and is increasingly used in clinical microbiology laboratories. Here, MALDI-TOF MS was evaluated as a novel approach to separate Hib from other H. influenzae. PCR-verified Hib and non-Hib reference isolates were selected based on genetic and spectral characteristics. Mass spectra of reference isolates were acquired and used to generate different classification algorithms for Hib/non-Hib differentiation using both ClinProTools and the MALDI Biotyper software. A test series of mass spectra from 33 Hib and 77 non-Hib isolates, all characterized by PCR, was used to evaluate the algorithms. Several algorithms yielded good results, but the two best were a ClinProTools model based on 22 separating peaks and subtyping main spectra (MSPs) using MALDI Biotyper. The ClinProTools model had a sensitivity of 100% and a specificity of 99%, and the results were 98% reproducible using a different MALDI-TOF MS instrument. The Biotyper subtyping MSPs had a sensitivity of 97%, a specificity of 100%, and 93% reproducibility. Our results suggest that it is possible to use MALDI-TOF MS to differentiate Hib from other H. influenzae. This is a promising method for rapidly identifying Hib in unvaccinated populations and for the screening and surveillance of Hib carriage in vaccinated populations. PMID:25926500

  14. Identification of Haemophilus influenzae Type b Isolates by Use of Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry.

    Science.gov (United States)

    Månsson, Viktor; Resman, Fredrik; Kostrzewa, Markus; Nilson, Bo; Riesbeck, Kristian

    2015-07-01

    Haemophilus influenzae type b (Hib) is, in contrast to non-type b H. influenzae, associated with severe invasive disease, such as meningitis and epiglottitis, in small children. To date, accurate H. influenzae capsule typing requires PCR, a time-consuming and cumbersome method. Matrix-assisted laser desorption ionization-time of flight mass spectrometry (MALDI-TOF MS) provides rapid bacterial diagnostics and is increasingly used in clinical microbiology laboratories. Here, MALDI-TOF MS was evaluated as a novel approach to separate Hib from other H. influenzae. PCR-verified Hib and non-Hib reference isolates were selected based on genetic and spectral characteristics. Mass spectra of reference isolates were acquired and used to generate different classification algorithms for Hib/non-Hib differentiation using both ClinProTools and the MALDI Biotyper software. A test series of mass spectra from 33 Hib and 77 non-Hib isolates, all characterized by PCR, was used to evaluate the algorithms. Several algorithms yielded good results, but the two best were a ClinProTools model based on 22 separating peaks and subtyping main spectra (MSPs) using MALDI Biotyper. The ClinProTools model had a sensitivity of 100% and a specificity of 99%, and the results were 98% reproducible using a different MALDI-TOF MS instrument. The Biotyper subtyping MSPs had a sensitivity of 97%, a specificity of 100%, and 93% reproducibility. Our results suggest that it is possible to use MALDI-TOF MS to differentiate Hib from other H. influenzae. This is a promising method for rapidly identifying Hib in unvaccinated populations and for the screening and surveillance of Hib carriage in vaccinated populations.

  15. Reduced Susceptibility to Rifampicin and Resistance to Multiple Antimicrobial Agents among Brucella abortus Isolates from Cattle in Brazil.

    Science.gov (United States)

    Barbosa Pauletti, Rebeca; Reinato Stynen, Ana Paula; Pinto da Silva Mol, Juliana; Seles Dorneles, Elaine Maria; Alves, Telma Maria; de Sousa Moura Souto, Monalisa; Minharro, Silvia; Heinemann, Marcos Bryan; Lage, Andrey Pereira

    2015-01-01

    This study aimed to determine the susceptibility profile of Brazilian Brucella abortus isolates from cattle to eight antimicrobial agents that are recommended for the treatment of human brucellosis and to correlate the susceptibility patterns with origin, biotype and MLVA16-genotype of the strains. Screening of 147 B. abortus strains showed 100% sensitivity to doxycycline and ofloxacin, one (0.68%) strain resistant to ciprofloxacin, two strains (1.36%) resistant to streptomycin, two strains (1.36%) resistant to trimethoprim-sulfamethoxazole and five strains (3.40%) resistant to gentamicin. For rifampicin, three strains (2.04%) were resistant and 54 strains (36.73%) showed reduced sensitivity. Two strains were considered multidrug resistant. In conclusion, the majority of B. abortus strains isolated from cattle in Brazil were sensitive to the antimicrobials commonly used for the treatment of human brucellosis; however, a considerable proportion of strains showed reduced susceptibility to rifampicin and two strains were considered multidrug resistant. Moreover, there was no correlation among the drug susceptibility pattern, origin, biotype and MLVA16-genotypes of these strains.

  16. Crescimento diferencial de biótipos de Conyza SPP. resistente e suscetível ao herbicida glifosato Differential growth of glyphosate-resistant and susceptible biotypes of Conyza SPP

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    Murilo Sala Moreira

    2010-01-01

    Full Text Available Este trabalho foi realizado com o objetivo de comparar, em condição controlada e não-competitiva, o crescimento de biótipos de Conyza canadensis e C. bonariensis resistente e suscetível ao herbicida glifosato, a fim de quantificar os efeitos da pressão de seleção para resistência nos biótipos. Dois experimentos foram desenvolvidos com tratamentos organizados em esquema fatorial 9 x 2, com nove avaliações periódicas de crescimento e dois biótipos de cada espécie. As variáveis avaliadas por planta foram: área foliar; massa seca da parte aérea, das raízes e total, obtendo-se, a partir desta última, a taxa de crescimento absoluto. O biótipo de C. canadensis resistente ao glifosato possui crescimento mais lento, menor acúmulo de área foliar e de massa seca que o biótipo suscetível. Menores áreas foliar e massa seca também foram registradas para o biótipo de C. bonariensis resistente ao glifosato quando comparado ao suscetível, porém com diferenças mais sutis que aquelas constatadas para C. canadensis. O crescimento absoluto do biótipo suscetível foi superior ao do resistente em ambas as espécies. A pressão de seleção para resistência ao glifosato teve impactos negativos na habilidade de crescimento dos biótipos.This work was carried out with the objective of comparing, under controlled and non-competitive condition, the growth of glyphosate-resistant and susceptible biotypes of Conyza canadensis and C. bonariensis; to quantify the effects of resistance selection pressure on the biotypes. Two trials were developed with treatments organized according to a factorial scheme 9 x 2, where nine were periodical growth evaluations and two were biotypes of each species. The variables evaluated per plant were: leaf area and dry mass (shoot, root and total; to determine absolute growth rate from the total dry mass. The glyphosate-resistant biotype of C. canadensis exhibits slower growth and smaller accumulation of leaf area

  17. Competitiveness of ALS inhibitors resistant and susceptible biotypes of Greater Beggarticks (Bidens subalternans Competitividade de biótipos de Picão-Preto (Bidens subalternans Resistente e euscetível aos inibidores da ALS

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    F.P. Lamego

    2011-06-01

    Full Text Available The continuous use of ALS-inhibiting herbicides has led to the evolution of herbicide-resistant weeds worldwide. Greater beggarticks is one of the most troublesome weeds found in the soybean production system in Brazil. Recently, a greater beggarticks biotype that is resistant (R to ALS inhibitors due to Trp574Leu mutation in the ALS gene was identified. Also, the adaptive traits between susceptible (S and R to ALS inhibitors biotypes of greater beggarticks were compared. Specifically, we aimed to: (1 evaluate and compare the relative growth rates (RGR between the biotypes; (2 analyze the seed germination characteristics of R and S biotypes under different temperature conditions; and (3 evaluate their competitive ability in a replacement series study. The experiments were conducted at the University of Arkansas, USA, in 2007 and at Universidade Federal do Rio Grande do Sul (Federal University of Rio Grande do Sul, Brazil, in 2008. Plant proportions for replacement series studies were respectively 100:0, 75:25, 50:50, 25:75 and 0:100, with a total population of 150 plants m-2. There was no difference in RGR between R and S biotypes. The R-biotype germination rate was lower than that of the S biotype. However, at low temperature conditions (15 ºC, the reverse was observed. In general, there is no difference in the competitive ability between R and S greater beggarticks biotypes.O uso contínuo de herbicidas inibidores da ALS tem levado à evolução de plantas daninhas resistentes mundialmente. Picão-preto é uma das mais importantes plantas daninhas no sistema de produção de soja no Brasil. Recentemente, foi identificado um biótipo de picao-preto resistente (R aos inibidores da ALS devido à mutação Trp574Leu no gene ALS. Também, foram comparadas características adaptativas entre biótipos de picao-preto suscetível (S e R aos inibidores da ALS. Especificamente, os objetivos deste trabalho foram: (1 avaliar e comparar o crescimento

  18. 牙周生物型对前牙美学区口腔治疗影响的研究进展%Advances of the effects of periodontal biotype on oral therapy in anterior dental aesthetic area

    Institute of Scientific and Technical Information of China (English)

    陈晨; 孙颖

    2016-01-01

    Periodontal biotype is very important for oral therapy, especially in anterior dental aesthetic area. It is related with period-ontology, implantology, prosthodontics, orthodontics and so on, and has attracted attentions from more and more researchers and clini-cians. This paper reviewed the classifications, characteristics, measurement methods and effects of periodontal biotype on oral therapy in anterior dental aesthetic area.%牙周生物型对口腔治疗,尤其是前牙美学区治疗具有重要意义,涉及牙周、种植、修复、正畸等多个临床领域,近年来已受到越来越多学者的关注.该文拟就牙周生物型的分型、特点、常用测量方法 及对前牙美学区治疗的影响作一综述.

  19. Resistência ao glyphosate em biótipos de buva (Conyza spp. das regiões oeste e sudoeste do Paraná Resistance to glyphosate in Conyza spp. biotypes in western and southwestern Parana, Brazil

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    M.M Trezzi

    2011-01-01

    Full Text Available A resistência ao glyphosate em biótipos de Conyza spp. em áreas de lavoura das regiões oeste e sudoeste do Paraná causa grandes dificuldades ao manejo e, consequentemente, problemas econômicos e ambientais. Este experimento objetivou determinar a existência de resistência ao herbicida glyphosate em biótipos de buva (Conyza spp. suspeitos, coletados em lavouras das regiões oeste e sudoeste do Paraná, comparando-os com biótipos suscetíveis. O delineamento experimental utilizado foi inteiramente casualizado, em esquema fatorial 12 x 8 x 3. Os fatores consistiram de 12 biótipos de buva, doses de glyphosate (0, 100, 180, 324, 583, 1.050, 1.888 e 3.345 g ha-1 e épocas de avaliação para a variável controle (7, 14 e 21 dias após a aplicação. Para as variáveis matéria verde e matéria seca, o esquema fatorial utilizado foi o 12 x 8. As variáveis avaliadas foram controle visual, matéria verde, matéria seca, C50, GR50 e fator de resistência. A dose de 3.345 g glyphosate ha-1 foi a que apresentou maior nível de controle dos biótipos, porém o controle dos biótipos suspeitos não foi efetivo, necessitando de doses mais altas. Todos os biótipos de buva suspeitos de resistência ao glyphosate tiveram essa característica confirmada. Entretanto, constatou-se grande amplitude de fatores de resistência, o que caracteriza a variabilidade entre os biótipos resistentes. Essas informações poderão ser utilizadas no planejamento de estratégias de manejo das populações resistentes e na prevenção da ocorrência de novas áreas com buva resistente ao glyphosate.Glyphosate-resistant biotypes of Conyza spp. (hairy fleabane, horseweed in crop areas in the western and southwestern regions of the state of Paraná, Brazil, cause great management, economic, and environmental problems. This experiment aimed to determine the existence of horseweed biotypes resistant to glyphosate in the suspected populations collected from farms in western

  20. Antibiotic Resistance of Vibrio cholerae Isolates from Kashan, Iran

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    Afzali H.MD,

    2016-03-01

    Full Text Available Abstract Aims: Cholera is an acute diarrheal disease that can lead to severe dehydration and death. Antibiotic resistance is a big challenge in infective disease like Cholera. The present study aimed to understand the characteristics and trends of antibiotic resistance of V. cholerae isolations in and around Kashan, Iran. Instrument & Methods: In this descriptive cross-sectional study, samples were gathered using census method from 1998 to 2013 in Kashan, Iran. 1132 fecal samples of patients with acute diarrhea and 237 samples of suspected water samples were taken. The serotypes and biotypes were determined by an enzymatic method. Antibiotic susceptibility test was performed by using Disk Diffusion Method. Data were analyzed using SPSS 23 software. Fisher-exact and Chi-square tests were used to compare the statistical parameters. Findings: 96 fecal samples (8.5% and 18 water samples (7.6% were positive for Vibrio cholerae. Non-agglutinating (Nag isolates (75.4% were more common than serotype Inaba (13.2% and Ogawa (11.4%. Nag serotypes were mostly resistant to cefixime (44% and ampicillin (33%. In contaminated water samples also the most frequent cases were Nag serotype (50%. Nag serotype showed 22.2% of resistance to ampicillin and nitrofurantoin. Conclusion: Vibrio cholerae isolates in Kashan, Iran, are highly resistant to antibiotics, especially Nag serotypes.

  1. 随州地区阴道加德纳菌生物型分布及药敏结果分析%Biotype distribution and drug sensitivity of gardnerella vaginalis in suizhou

    Institute of Scientific and Technical Information of China (English)

    谢明水; 刘杨; 李玲

    2011-01-01

    OBJECTIVE To observe the current situation of infection and biotypes of Gardnerella vaginalis in suizhou area. METHODS Gardnerella vaginalis strains were isolated and cultured from vaginal secretions of Obstetrics and gynecology patients, either inpatients or outpatients. The isolated strains were typed by Piot. Susceptibility test was performed by K-B method. RESULTS The overall detection rate of GV in 326 patients suffered vaginopathy was 35.9%, all types were detected with the exception of 7 types. The sensitivity of ciprofloxacin, gentamycin,ampicillin, cefazolin, cefuroxime, cefotaxime, cefepime, azithromycin, arilin, SMZ-TMP, tazocin, and sulperazonewere49.6%, 21.4%, 35.0%, 56.4%, 66.7%, 59.0%, 87.2%, 54.7%, 46.2%,84.6%, 96.6%and 86.3% respectively. CONCLUSION The majority of types of GV isolated from BV suffers in the suizhou area are type 1,5,6 which are comparatively susceptive to cefepime, SMZ-TMP, tazocin, and sulperazone while are more resistant to ampicillin, arilin and aminoglycosides antibacterials.%目的 了解随州地区阴道加德纳菌(GV)的感染情况及生物型分布情况,分析药敏结果 为临床提供有价值的参考依据. 方法 对妇产科门诊和住院患者的宫颈或阴道分泌物进行分离培养,对分离的菌株进行鉴定并采用Piot分型法分型,再采用K-B法检测抗菌药物敏感性. 结果 326例细菌性阴道病(BV)患者GV的总检出率为35.9%,除7型外其余各型均检测到;GV对环丙沙星、庆大霉素、氨苄西林、头孢唑林、头孢呋辛、头孢噻肟、头孢吡肟、阿奇霉素、甲硝唑、磺胺甲噁唑/甲氧苄啶、哌拉西林/他唑巴坦、头孢哌酮/舒巴坦的敏感率分别为49.6%、21.4%、35.0%、56.4%、66.7%、59.0%、87.2%、54.7%、46.2%、84.6%、96.6%、86.3%. 结论 随州地区BV患者分离出的GV主要为1、5、6型,对头孢吡肟、磺胺甲噁唑/甲氧苄啶以及哌拉西林/他唑巴坦、头孢哌酮/舒巴坦有

  2. Genotyping of Clostridium perfringens isolated from healthy and diseased ostriches (Struthio camelus.

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    Jamshid Razmyar

    2014-02-01

    Full Text Available Clostridium perfringens is more prevalent type of clostridia genus isolated from the intestinal tract of ostrich (Struthio camelus. Necrotic enteritis (NE is a potentially fatal gastrointestinal (GI disease of poultry and other avian species, which produces marked destruction of intestinal lining in digestive tract caused by C. perfringens. Pathogenicity and lesions are correlated with the toxins produced, thus toxin typing of the bacterium has diagnostic and epidemiological significance. The aims of the present study were to determine the biotypes of C. perfringens among ostrich's farms either diseased and healthy ones and to screen the isolates for major toxin genes (cpa, cpb, etx, and iA, cpb2, and cpe.Thirty isolates of C. perfringens were obtained from NE-positive and NE-negative ostrich flocks in Khorasan-e-Razavi porvince and analyzed by multiplex PCR assay.All isolates were positive for alpha toxin gene (cpa and five of those were positive for beta toxin gene (cpb. The presence of cpb2 gene was detected in a high percentage of isolates originating from both healthy (93.3% and diseased flocks (80%. None of the isolate carried enterotoxin gene (cpe.The results suggest that types A and C of C. perfringens are the most prevalent types in ostrich in Iran. Due to detection of beta2 toxin gene in isolates from both healthy and diseased birds, it appears that the presence of cpb2 is not considered a risk by itself.

  3. MALDI-TOF mass spectrometry proteomic based identification of clinical bacterial isolates

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    Ashutosh Panda

    2014-01-01

    Full Text Available Background & objectives: Pathogenic bacteria often cause life threatening infections especially in immunocompromised individuals. Therefore, rapid and reliable species identification is essential for a successful treatment and disease management. We evaluated a rapid, proteomic based technique for identification of clinical bacterial isolates by protein profiling using matrix-assisted laser desorption-ionization time - of - flight mass spectrometry (MALDI-TOF MS. Methods: Freshly grown bacterial isolates were selected from culture plates. Ethanol/formic acid extraction procedure was carried out, followed by charging of MALDI target plate with the extract and overlaying with α-cyano-4 hydroxy-cinnamic acid matrix solution. Identification was performed using the MALDI BioTyper 1.1, software for microbial identification (Bruker Daltonik GmbH, Bremen, Germany. Results: A comparative analysis of 82 clinical bacterial isolates using MALDI -TOF MS and conventional techniques was carried out. Amongst the clinical isolates, the accuracy at the species level for clinical isolates was 98.78%. One out of 82 isolates was not in accordance with the conventional assays because MALDI-TOF MS established it as Streptococcus pneumoniae and conventional methods as Streptococcus viridans. Interpretation & conclusions: MALDI - TOF MS was found to be an accurate, rapid, cost-effective and robust system for identification of clinical bacterial isolates. This innovative approach holds promise for earlier therapeutic intervention leading to better patient care.

  4. Differential expression of the CrV1 haemocyte inactivation-associated polydnavirus gene in the African maize stem borer Busseola fusca (Fuller) parasitized by two biotypes of the endoparasitoid Cotesia sesamiae (Cameron).

    Science.gov (United States)

    Gitau, C W; Gundersen-Rindal, D; Pedroni, M; Mbugi, P J; Dupas, S

    2007-07-01

    Polydnaviruses are rarely studied for their natural variation in immune suppressive abilities. The polydnavirus harboring braconid Cotesia sesamiae, a widespread endoparasitoid of Busseola fusca and Sesamia calamistis in sub-Saharan Africa exists as two biotypes. In Kenya, the western biotype completes development in B. fusca larvae. However, eggs of the coastal C. sesamiae are encapsulated in this host and ultimately, no parasitoids emerge from parasitized B. fusca larvae. Both biotypes develop successfully in S. calamistis larvae. Encapsulation activity by B. fusca larvae towards eggs of the avirulent C. sesamiae was detectable six hours post-parasitization. The differences in encapsulation of virulent and avirulent strains were associated with differences in nucleotide sequences and expression of a CrV1 polydnavirus (PDV) gene, which is associated with haemocyte inactivation in the Cotesia rubecula/Pieris rapae system. CrV1 expression was faint or absent in fat body and haemolymph samples from B. fusca parasitized by the avirulent C. sesamiae, which exhibited encapsulation of eggs. Expression was high in fat body and haemolymph samples from both B. fusca and S. calamistis larvae parasitized by the virulent C. sesamiae, encapsulation in the former peaking at the same time points as CrV1 expression in the latter. Non synonymous difference in CrV1 gene sequences between virulent and avirulent wasp suggests that variations in B. fusca parasitism by C. sesamiae may be due to qualitative differences in CrV1-haemocyte interactions.

  5. Use of monoclonal antibodies for the identification of Leishmania spp. isolated from humans and wild rodents in the State of Campeche, Mexico.

    Science.gov (United States)

    Canto-Lara, S B; Van Wynsberghe, N R; Vargas-González, A; Ojeda-Farfán, F F; Andrade-Narváez, F J

    1999-01-01

    The genus Leishmania includes 30 described species which infect a wide variety of mammalian hosts. The precise identification of leishmanial parasites at the species level is very important in order to determine whether an organism, causing the disease in a given area, is of the same biotype as that found in suspected mammalian reservoirs. The objectives of the present study were (1) to identify leishmanial parasites isolated from humans and wild rodents from the State of Campeche, an endemic focus of localized cutaneous leishmaniasis (LCL) in southern Mexico, using an indirect immunofluorescent assay (IFA) with monoclonal antibodies (Mabs); and (2) to determine if the parasites of the two types of hosts were of the same biotype. All the wild rodents (six Ototylomys phyllotis, eight Oryzomys melanotis, five Peromyscus yucatanicus and two Sigmodon hispidus) and 96% (24/25) of the human isolates were identified as Leishmania (L.) mexicana confirming that this specific LCL focus is a wild zoonosis. The presence of one human isolate of L. (Viannia) braziliensis in the State of Campeche, confirmed the importance of an accurate taxonomic identification at species level.

  6. Comparison between acute oral/respiratory and chronic stomatitis/gingivitis isolates of feline calicivirus: pathogenicity, antigenic profile and cross-neutralisation studies.

    Science.gov (United States)

    Poulet, H; Brunet, S; Soulier, M; Leroy, V; Goutebroze, S; Chappuis, G

    2000-01-01

    Feline calicivirus (FCV) is a major oral and respiratory pathogen of cats, able to induce subclinical infection as well as acute disease. It is also characterized by a high degree of antigenic variation. This work sought to address the question of the existence of distinct biotypes of FCV. Eight French, 6 British and 9 American FCV isolates, responsible for acute oral/respiratory disease or chronic gingivitis/stomatitis, were compared for their pathogenicity, antigenic profiles and serological relationships. Antigenic profiles were assessed by an indirect immunofluorescence assay with a large panel of characterized monoclonal antibodies. Cross-neutralisation assays were performed with specific cat antisera collected at 30 days p.i., then analysed by calculation of antigenic bilateral relatedness and dominance. Whatever their pathogenic origin, all the isolates induced an acute upper-respiratory tract infection in oronasally infected SPF kittens. Their antigenic profiles were different and did not correlate with their geographical or pathological origin. Cross-neutralisation studies and calculation of the mean bilateral relatedness allowed us to distinguish chronic original isolates from acute original ones. This study did not confirm the existence of FCV biotypes but showed that the chronic carrier state is related to the emergence of antigenically distant viruses.

  7. Diuraphis noxia (Hemiptera: Aphididae: Identificación de los biotipos presentes en poblaciones argentinas Diuraphis noxia (Hemiptera: Aphididae: Identification of biotypes present in populations of Argentina

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    Mónica Ricci

    2012-06-01

    Full Text Available El objetivo del trabajo fue evaluar el comportamiento de líneas de trigo y cultivares diferenciales, portadores de genes de resistencia, a fin de determinar la composición biotípica del áfido Diuraphis noxia Kurdjumov, "Pulgón Ruso del Trigo" (PRT, en Argentina; y se identifican aquellos hospederos con resistencia genética al PRT. Los 18 cultivares diferenciales y líneas Novel, se sembraron en invernáculo, en un diseño aleatorio con 2 repeticiones. Las observaciones se realizaron a los 21 y 51 días de la infestación, se determinó el grado de clorosis y de enrollamiento foliar. Los resultados se analizaron con ANOVA y el Test de Tuckey (a=0,05. A los 21 días, las líneas 14 y 1 (Noveles presentaron el mejor comportamiento, pero se desconocen sus genes de resistencia. Los cultivares portadores de Dn2 y Dn7 resultaron con un alto nivel de tolerancia, mientras que Dn1 y dn3 fueron moderadamente tolerantes y las portadoras de Dn4 y Dn5, muy dañados por las poblaciones Argentinas de PRT. A los 51 días, solo Dn7 y las líneas 14 y 1 mantuvieron un comportamiento de tolerancia al áfido. Se infiere que en el país se encontrarían los biotipos 1, 2* y 5*, estos dos últimos con características diferentes a los identificados en EE.UU. Se concluye que los cultivares mejorados en otros países, pueden comportarse como susceptibles frente a las poblaciones locales.The aim of the current research was to assess the plant responses of wheat lines and differential cultivars carrying Diuraphis noxia Kurdjumov resistance genes when subjected to aphid infestation, in order to determine the biotypic composition of RWA populations in Argentina. Eighteen lines and differential cultivars were sown in a greenhouse in a randomized design with two replicates. Two recordings of the chlorotic damage and the level of leaf rolling were made after 21 and 51 days from the infestation onset. The results were analyzed with an ANOVA and Tuckey Test (a=0.05. After

  8. Potencial competitivo de biótipos de azevém (Lolium multiflorum Competitive potential of ryegras (Lolium multiflorum biotypes

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    E.A. Ferreira

    2008-06-01

    Full Text Available Objetivou-se com este trabalho avaliar a capacidade competitiva entre biótipos de azevém resistente e suscetível ao glyphosate, bem como a interferência deles, em diferentes densidades, sobre o crescimento de plantas de trigo. No momento da colheita, aos 50 dias após a emergência do azevém, avaliaram-se o número de perfilhos, a altura de plantas e a área foliar. Nessa mesma ocasião, coletou-se a parte aérea e as raízes das plantas de trigo e de azevém resistente e suscetível, determinando-se a seguir a massa seca desse material em partes separadas (raiz, caule e folhas. Com base nos dados avaliados, as seguintes variáveis para o trigo e para os biótipos de azevém foram calculadas: taxa de crescimento da cultura (TCC = MS A/Ndias, em que MS A é a massa seca da parte aérea e Ndias é o período em dias entre a emergência e a colheita das plantas; área foliar específica (SLA = Af/MSf, em que Af é a área foliar e MSf é a massa seca foliar; e o índice de área (IAF = Af/St, sendo St a superfície de solo, indicando qual a área de folhas por m² de solo. As características avaliadas altura de planta, massa seca e área foliar dos biótipos de azevém suscetível apresentaram menor tendência de redução e maior plasticidade fenotípica, com o incremento da densidade de plantas por área em relação aos biótipos resistentes. Com relação à competição dos biótipos de azevém com plantas de trigo, efeito negativo sobre a cultura também foi observado quando esta se encontrava sob interferência do biótipo suscetível. Conclui-se que o biótipo suscetível de azevém é mais competitivo que o resistente.The objective of this work was to evaluate the competitiveness of ryegrass biotypes resistant and susceptible to glyphosate, as well as their interference in wheat growth at different densities. At harvesting, 50 days after emergence, tillering, height, and leaf area of ryegrass plants were evaluated and shoot and roots

  9. [Yersinia enterocolitica: 1st isolation from meat products in Argentina].

    Science.gov (United States)

    de Guzmán, A M; de Pederiva, N B; Torres, C N; Eiguer, T; Giménez, D F

    1984-01-01

    A search for Y. enterocolitica in fresh foods of animal origin has been carried out. Isolations were obtained from "chorizos" (thick fresh sausages), "salchichas" (slender fresh sausages), bovine and pig's tongues and caecum (Tables 1, 2). Enrichments were performed in saline phosphate buffer 0.067 M, pH 7.6 and nutrient broth with 0.5% glucose. Caecum and tongue samples were postenriched in 0.5% KOH. Subcultures were done in Salmonella-Shigella agar, MacConkey agar and eosin-methylene blue agar. Isolates were identified through biochemical, serological and lysotyping methods. The following biotypes (B), serotypes (O) and lysotypes (Lis) were isolated: from "chorizos", B2, 0:9, Lis X3 and B1, 0:7,8, Lis Xo. From "salchichas", B1, 0:5, Lis Xz. From bovine tongues, B1, 0:5, Lis Xz and B2, 0:9, Lis X3. From pig tongues, B1, 0:6, Lis Xz. From pig caecum, B1, 0:6, Lis Xz and B1, 0:5, Lis Xz. Serotype B2, 0:9, Lis X3 isolated from "chorizos" and bovine tongues has been only exceptionally found outside of human beings. Serotype B1, 0:6, Liz Xz was isolated from the tongue and caecum of one pig. From the caecum of another pig two serotypes, B1, 0:5, Liz Xz and B1, 0:6, Liz Xz, were isolated. In order to determine the importance of Y. entercolitica as etiologic agent of yersiniosis in Argentina, further studies on the frequency and distribution of this agent are recommended.

  10. Prevalence of thermotolerant species of Campylobacter and their biotypes in children and domestic birds and dogs in Southern Chile Prevalência de espécies termotolerantes de Campylobacter e seus biotipos em crianças, aves domésticas e cães no sul do Chile

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    Heriberto Fernández

    1994-10-01

    Full Text Available The prevalence of thermotolerant Campylobacter in diarrhoeic and healthy children as well as in dogs, hens, ducks and pigeons was determined in Southern Chile. Campylobacter were found in 34.5% of the faecal samples examined. The isolation rate of Campylobacter in diarrhoeic and healthy children was 16.3% and 6.4% respectively. Despite C.jejuni was always more frequent than C. coli, the latter was isolated with a high frequency (29% from patients with diarrhoea. C.jejuni and C. coli biotypes I and II were found in healthy and diarrhoeic children and were predominant in all the animals species studied. This may point out towards the possible origin of strains infecting children.Foi determinada, no sul do Chile, a prevalência de espécies termotolerantes de Campylobacter e seus biotipos, em crianças normais e diarréicas, bem como em cães e aves domésticas. Campylobacter foi isolado em 34,5% do total das amostras estudadas sendo sua frequência de isolamento de 16,3% e 6,4% nas crianças com diarréia e normais, respectivamente. C. jejuni foi a espécie mais freqüente. Porém, C. coli foi isolado em 29% das crianças com diarréia. Somente os biotipos I e II, tanto de C. jejuni como de C. coli, foram isolados das crianças, os quais foram também os mais frequentemente encontrados nos animais, sugerindo uma possível associação epidemiológica entre eles

  11. Suscetibilidade de biótipos de arroz-vermelho e de cultivares de arroz irrigado ao herbicida imazethapyr Susceptibility of red rice biotypes and commercial rice cultivars to imazethapyr

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    S.H.B. Dornelles

    2010-01-01

    Full Text Available Para avaliar a suscetibilidade de biótipos de arroz-vermelho(Oryza sativa e cultivares comerciais de arroz ao herbicida imazethapyr, realizou-se um ensaio em casa de vegetação com cinco biótipos de arroz-vermelho (acessos Santa Maria 5, Pelotas 3, Rio Pardo 1, Manoel Viana 2 e Catuçaba 1, dois cultivares comerciais de arroz: Clearfield® (IRGA 422 CL e Puitá INTA CL e um cultivar convencional (IRGA 417. Utilizou-se a metodologia de curvas de dose-resposta proposta por Seefeldt et al. (1995. A metodologia de curvas de resposta foi gerada a partir dos parâmetros do modelo logístico e dos valores de I50. Os biótipos de arroz-vermelho e os cultivares foram submetidos a seis doses do herbicida imazethapyr (0; 33,12; 66,25; 132,5; 265,0; e 530,0 g i.a. ha-1. As plantas de arroz foram contadas e coletadas no 20º dia após a aplicação dos tratamentos. A análise do percentual de dano foi realizada através de avaliação visual da fitointoxicação (%, massa verde e massa seca das plantas. Analisando as curvas e os resultados da análise da variância, pode-se inferir que os cultivares Clearfield Irga 422 CL e Puitá INTA CL foram significativamente iguais ao biótipo de arroz-vermelho Catuçaba 1, resistindo a doses de imazethapyr superiores à recomendada em campo para o sistema Clearfield®. Os biótipos Manoel Viana 2, Santa Maria 5 e Pelotas 3 agruparam-se com o cultivar convencional IRGA 417, sendo suscetíveis à dose comercial do herbicida. O biótipo Rio Pardo 1 também é resistente ao herbicida imazethapyr, porém menos resistente que o biótipo Catuçaba 1.To evaluate the susceptibility of biotypes of red rice (Oryza sativa and commercial rice cultivars to the herbicide imazethapyr, a greenhouse assay was conducted with five red rice biotypes (accesses Santa Maria 5, Pelotas 3, Rio Pardo 1, 2 and Manoel Viana Catuçaba 1, two commercial rice cultivars: Clearfield ® (Irga CL 422 and CL Puit INTA, and a conventional cultivar (Irga

  12. Aspectos morfofisiológicos de biótipos de azevém (Lolium multiflorum sensíveis e resistentes ao glyphosate Morphophysiological aspects of ryegrass biotypes (Lolium multiflorum sensitive and resistant to glyphosate

    Directory of Open Access Journals (Sweden)

    J Galvan

    2011-01-01

    Full Text Available O azevém é uma gramínea com elevado potencial de infestação em lavouras e pomares, e seu controle com glyphosate tem sido limitado devido à existência de biótipos resistentes a esse herbicida. Objetivou-se comparar quatro biótipos de azevém coletados em diferentes regiões do Rio Grande do Sul, com o intuito de testar a hipótese de que aspectos morfofisiológicos e fenológicos estejam vinculados à resistência. O experimento foi conduzido em casa de vegetação, onde um biótipo suscetível (B1S, Passo Fundo e três resistentes ao glyphosate (B2R, Santa Maria; B3R, Júlio de Castilhos; e B4R, Vacaria foram colhidos aos 126, 147, 168 e 189 dias de idade. O biótipo B1S mostrou 21 dias de antecipação no florescimento em relação aos demais biótipos. O biótipo B4R produziu significativamente mais folhas (43 por planta, afilhos (14 por planta, espigas (14 por planta, sementes (3.484 por planta e matéria seca total (raízes + parte aérea = 13,8 g por planta. Conclui-se que biótipos sensíveis não podem ser diferidos de biótipos resistentes apenas por aspectos morfológicos relacionados ao vigor.Ryegrass has a high potential for infestation in crops and orchads and its control with glyphosate has been limited due to the existence of herbicide-resistant biotypes. The objective of this work was to compare four ryegrass biotypes collected from different regions in the state of Rio Grande do Sul, Brazil, to test the hypothesis that morphophysiological aspects and phenology are linked to resistance. The experiment was conducted in a greenhouse, where four biotypes, one susceptible (B1S, Passo Fundo and three resistant to glyphosate (B2R, Santa Maria; B3R, Julio de Castillos; B4R, Vacaria were collected at 126, 147, 168 and 189 days of age. Biotype B1S showed 21 days in advance of flowering in relation to the other biotypes. Biotype B4R produced significantly more leaves (43 per plant, tillers (14 per plant, ears (14 per plant, seeds

  13. Performance and feeding behaviour of two biotypes of the black currant-lettuce aphid, Nasonovia ribisnigri, on resistant and susceptible Lactuca sativa near-isogenic lines.

    Science.gov (United States)

    ten Broeke, Cindy J M; Dicke, Marcel; van Loon, Joop J A

    2013-10-01

    The black currant-lettuce aphid, Nasonovia ribisnigri, is an important pest of cultivated lettuce, Lactuca sativa. Since 1982, the control of this aphid on lettuce is largely based on host plant resistance, conferred by the Nr gene, introgressed from Lactuca virosa. The resistance mechanism remains to be identified. N. ribisnigri populations virulent on the Nr-based resistance in lettuce have emerged in several locations in Europe since 2007. The objective of this study was to investigate the resistance mechanism mediated by the Nr gene in lettuce by detailed studies of aphid feeding behaviour and performance. Both avirulent (Nr:0) and virulent (Nr:1)biotypes of N. ribisnigri were studied on five resistant and two susceptible near isogenic lines (NILs). In addition, survival and colony development were quantified.Nr:0 aphids showed a strong decrease in sieve element ingestion and took longer to accept a sieve element on resistant NILs compared with susceptible NILs, and no aphids survived on the resistant NIL. Nr:1 aphids fed and performed equally well on the resistant and susceptible NILs. The resistance mechanism against Nr:0 aphids encoded by the Nr gene seems to be located in the phloem, although we also observed differences in feeding behaviour during the pathway phase to the phloem. Nr:1 aphids were highly virulent to the resistance conferred by the Nr gene. The consequences of the appearance of Nr:1 aphids for control of N. ribisnigri are discussed.

  14. Novos acessos de tomateiro resistentes à mosca-branca biótipo B New accessions of tomato resistant to whitefly biotype B

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    Maria Elisa de Sena Fernandes

    2009-11-01

    Full Text Available O objetivo deste trabalho foi selecionar novas fontes de resistência a Bemisia tabaci biótipo B, entre 34 acessos de tomateiro (Lycopersicon esculentum, do Banco de Germoplasma de Hortaliças da UFV. Avaliaram-se os números de adultos, ovos e ninfas por planta, além da densidade de tricomas. Detectaram-se diferenças entre os acessos nas variáveis avaliadas. Os acessos BGH-166, BGH-616, BGH-850, BGH-990, BGH-2102 e BGH-2125 apresentaram menor número de adultos, ovos e ninfas por planta e tiveram menor densidade de tricomas. A resistência dos acessos de tomate à mosca-branca foi associada a uma menor densidade de tricomas.The objective of this work was to evaluate resistance to Bemisia tabaci biotype B in 34 tomato (Lycopersicon esculentum accessions from the Banco de Germoplasma de Hortaliças of UFV. The number of adults, eggs and nymphs per plant besides of trichome density were evaluated. Differences between accessions were found for the evaluated variables. Accessions BGH-166, BGH-616, BGH-850, BGH-990, BGH-2102 and BGH-2125 presented less infestation of adults, eggs and nymphs per plant and showed lower trichome density. The resistance of these tomato accessions to whitefly was associated to a lower trichome density.

  15. Comparative phenotypic characterization of Vibrio cholerae isolates collected from aquatic environments of Georgia.

    Science.gov (United States)

    Kokashvili, T; Elbakidze, T; Jaiani, E; Janelidze, N; Kamkamidze, G; Whitehouse, C; Huq, A; Tediashvili, M

    2013-11-01

    Vibrio cholerae is ubiquitous in aquatic environment inhabiting marine, fresh and brackish waters. V. cholerae serotypes O1 and O139 cause the devastating diarrheal disease cholera, which is often fatal without proper treatment. Little is known regarding the abundance and diversity of clinically important nonhalophilic vibrios in the South Caucasus region, particularly in Georgia. Here we provide the data on the Georgian environmental strains of V. cholerae isolated in 2006-2009 years from the coastal waters of the Black Sea and inland water reservoirs near Tbilisi. In total, 846 V. cholerae strains were collected from the water samples, most of them (705 strains) obtained from fresh water lakes. Isolation pattern of V. cholerae showed obvious seasonality with the highest isolation rates in late summer - early autumn. Twenty-nine isolates of V. cholerae were attributed to the O1 serotype based on serological studies and PCR identification and were further grouped by biochemical properties into classical and El Tor biotypes as well as hybrids. The study of antibiotic susceptibility profiles for V. cholerae isolates showed that 95% were sensitive to tetracycline, 91% to doxycycline, and 91% to ciprofloxacin. Interestingly, the freshwater isolates appeared to be more resistant to antibiotics than the Black Sea isolates. Among Black Sea isolates of V. cholerae toxigenic strains of O1 serotype revealed higher antibiotic resistance compared to non- O1/non-O139 isolates. In addition, V. cholerae O1 and non- O1/non-O139 isolates differed by phage susceptibility profiles, with higher diversity within the population of environmental non-O1/non-O139 V. cholerae isolates.

  16. Characterization of Staphylococcus aureus Isolated from Clinical Specimens by Matrix Assisted Laser Desorption/Ionization Time-of-flight Mass Spectrometry

    Institute of Scientific and Technical Information of China (English)

    WANG Ye Ru; CHEN Qian; CUI Sheng Hui; LI Feng Qin

    2013-01-01

    Objective To develop a matrix assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF-MS) approach to identify Staphylococcus aureus (S. aureus) and differentiate methicillin-resistant S. aureus (MRSA) from methicillin-sensitive S. aureus (MSSA). Methods A total of 100 S. aureus strains isolated from clinical specimens and farm workers were collected and analyzed by MALDI-TOF-MS. And data obtained were interpreted with biotyper software. Results Ninety-two strains were identified by MALDI-TOF-MS as S. aureus at a level of secure genus and probable species, and 4 strains were identified at probable genus after their cultivation, spectral collection and data preprocessing. One strain was identified as S. aureus with lower score. It was revealed that identification of S. aureus by MALDI-TOF-MS was highly correlated with typing by biochemical and serological methods with an accuracy as high as 97%. The biotyper cluster analysis showed that 100 isolates were divided into 2 types at the distance level of 400. Higher peak intensity in the mass of both 3784 Da and 5700 Da was observed in MRSA, whereas that was absent from MSSA. Conclusion MALDI-TOF-MS is considered as a simple, rapid and highly reproducible technique with high-throughput and accuracy for the identification of S. aureus and it can reliably differentiate MRSA from MSSA.

  17. Matrix-assisted laser desorption ionization-time of flight mass spectrometry based identification of Edwardsiella ictaluri isolated from Vietnamese striped catfish (Pangasius hypothalamus)

    Science.gov (United States)

    Nhu, Truong Quynh; Park, Seong Bin; Kim, Si Won; Lee, Jung Seok; Im, Se Pyeong; Lazarte, Jassy Mary S.; Seo, Jong Pyo; Lee, Woo-Jai; Kim, Jae Sung

    2016-01-01

    Edwardsiella (E.) ictaluri is a major bacterial pathogen that affects commercially farmed striped catfish (Pangasius hypothalamus) in Vietnam. In a previous study, 19 strains of E. ictaluri collected from striped catfish were biochemically identified with an API-20E system. Here, the same 19 strains were used to assess the ability of matrix-assisted laser desorption ionization-time of flight mass spectrometry (MALDI-TOF MS; applied using a MALDI Biotyper) to conduct rapid, easy and accurate identification of E. ictaluri. MALDI-TOF MS could directly detect the specific peptide patterns of cultured E. ictaluri colonies with high (> 2.0, indicating species-level identification) scores. MALDI Biotyper 3.0 software revealed that all of the strains examined in this study possessed highly similar peptide peak patterns. In addition, electrophoresis (SDS-PAGE) and subsequent immuno-blotting using a specific chicken antibody (IgY) against E. ictaluri revealed that the isolates had highly similar protein profiles and antigenic banding profiles. The results of this study suggest that E. ictaluri isolated from striped catfish in Vietnam have homologous protein compositions. This is important, because it indicates that MALDI-TOF MS analysis could potentially outperform the conventional methods of identifying E. ictaluri. PMID:26726022

  18. Potential Role of Yeast Strains Isolated from Grapes in the Production of Taurasi DOCG

    Science.gov (United States)

    Aponte, Maria; Blaiotta, Giuseppe

    2016-01-01

    Twelve samples of Aglianico grapes, collected in different locations of the Taurasi DOCG (Appellation of Controlled and Guaranteed Origin) production area were naturally fermented in sterile containers at room temperature. A total of 70 yeast cultures were isolated from countable WL agar plates: 52 in the middle of the fermentation and 18 at the end. On the basis of ITS-RFLP analysis and ITS sequencing, all cultures collected at the end of fermentations were identified as Saccharomyces (S.) cerevisiae; while, the 52 isolates, collected after 1 week, could be referred to the following species: Metschnikowia (M.) pulcherrima; Starmerella (Star.) bacillaris; Pichia (P.) kudriavzevii; Lachancea (L.) thermotolerans; Hanseniaspora (H.) uvarum; Pseudozyma (Pseud.) aphidis; S. cerevisiae. By means of Interdelta analysis, 18 different biotypes of S. cerevisiae were retrieved. All strains were characterized for ethanol production, SO2 resistance, H2S development, β-glucosidasic, esterasic and antagonistic activities. Fermentation abilities of selected strains were evaluated in micro-fermentations on Aglianico must. Within non-Saccharomyces species, some cultures showed features of technological interest. Antagonistic activity was expressed by some strains of M. pulcherrima, L. thermotolerans, P. kudriavzevii, and S. cerevisiae. Strains of M. pulcherrima showed the highest β-glucosidase activity and proved to be able to produce high concentrations of succinic acid. L. thermotolerans produced both succinic and lactic acids. The lowest amount of acetic acid was produced by M. pulcherrima and L. thermotolerans; while the highest content was recorded for H. uvarum. The strain of Star. bacillaris produced the highest amount of glycerol and was able to metabolize all fructose and malic acid. Strains of M. pulcherrima and H. uvarum showed a low fermentation power (about 4%), while, L. thermotolerans, Star. Bacillaris, and P. kudriavzevii of about 10%. Significant differences were

  19. Competitividade relativa entre cultivares de arroz irrigado e biótipo de arroz-vermelho Relative competitivity among flooded rice cultivars and a red rice biotype

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    N.G. Fleck

    2008-03-01

    Full Text Available O objetivo deste trabalho foi comparar as habilidades competitivas relativas entre dois cultivares de arroz e um biótipo de arroz-vermelho. Para isso, foram realizados experimentos em casa de vegetação na Universidade Federal do Rio Grande do Sul, na estação de crescimento 2001/02. O delineamento experimental utilizado foi o completamente casualizado, com quatro repetições. Os tratamentos foram arranjados em série de substituição e constituíram-se de cinco proporções de plantas de arroz e do biótipo competidor: 100:0, 75:25, 50:50, 25:75 e 0:100. O arroz foi representado pelos cultivares IRGA 417 e EEA 406, e os competidores, pelo arroz-vermelho e pelo cultivar EEA 406, usado como simulador daquele. A análise da competitividade foi efetuada por meio de diagramas aplicados a experimentos substitutivos e uso de índices de competitividade relativa. As variáveis estudadas foram afilhamento, estatura, área foliar e massa seca da parte aérea das plantas. O arroz-vermelho modificou negativamente o número de afilhos, a estatura e a massa seca da parte aérea das plantas dos cultivares IRGA 417 e EEA 406, demonstrando habilidade competitiva superior. Os cultivares de arroz IRGA 417 e EEA 406 não modificaram suas características morfofisiológicas quando em competição, independentemente da proporção de plantas entre ambos, demonstrando habilidades competitivas equivalentes.The objective of this study was to compare the relative competitive abilities between two rice cultivars and a red rice biotype. Greenhouse experiments were carried out at the Universidade Federal do Rio Grande do Sul, in the 2001/2002 growing season, in a completely randomized design, with four replications. The treatments were arranged in a replacement series assay, with five plant proportions of rice cultivars and competitor biotype being established: 100:0; 75:25; 50:50; 25:75 and 0:100, respectively. Rice was represented by the cultivars IRGA 417 and EEA

  20. Resistência de meloeiro a Bemisia Tabaci biótipo B Resistance of melon to Bemisia Tabaci biotype B

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    Sérgio Alexandre Mottola Pereira Coelho

    2009-01-01

    Full Text Available Em âmbito mundial, a mosca-branca Bemisia tabaci (Genn. biótipo B é praga-chave em diversas culturas. O uso de resistência varietal se destaca entre os métodos de controle, sendo considerado o método ideal. O objetivo do presente trabalho foi avaliar, em casa de vegetação, a resistência de 32 cultivares de meloeiro em relação a essa mosca-branca. Para atratividade, em 'Neve' observou-se o menor número de adultos na face abaxial das folhas (0,6 adulto/10 cm², enquanto 'Nilo' foi a mais preferida (5,6 adultos/10 cm². A oviposição foi avaliada em testes com e sem chance de escolha; em ambos, 'Neve' proporcionou o menor número de ovos, contrastando com 'Nilo', a cultivar com a maior média. A colonização da mosca-branca durante o ciclo das plantas foi avaliada por meio de uma escala de notas variando de 0 (ausência de colonização até 6 (folha totalmente colonizada; 'Neve' destacou-se por sua reduzida colonização, sendo as mais altas médias obtidas em 'Imperial', 'Jangada', 'Vereda', 'Deneb' e 'Nilo'. Na duração do ciclo ovo-adulto da mosca-branca, que variou de 24,0 ('Neve' a 25,4 dias ('Jangada', as cultivares não diferiram entre si. Quanto à emergência de adultos, as menores médias foram induzidas por Vereda' (68,2% e 'Nilo' (69,3%, indicando a possível ocorrência de resistência do tipo antibiose nessas duas cultivares, enquanto as maiores médias ocorreram em 'Imperial' (90,9 % e 'Deneb' (89,6%. Considerando-se os parâmetros avaliados, infere-se que 'Neve' é a cultivar mais resistente a B. tabaci biótipo B, podendo ser indicada para plantio em regiões onde essa praga ocorra de forma acentuada ou para uso em programas de melhoramento.Silverleaf whitefly B. tabaci biotype B is an important worldwide pest of many crops. Use of resistant cultivars is considered the ideal method of control. In this research, 32 cultivars of melon were evaluated under greenhouse conditions reganding resistance to silverleaf

  1. A SURVEY OF SIZES AND WEIGHTS OF BEMISIA TABACI(HOMOPTERA: ALEYRODIDAE)B BIOTYPE LIFE STAGES FROM FIELD GROWN COTTON AND CANTALOUPES

    Institute of Scientific and Technical Information of China (English)

    Chang-chiChu; JamesS.Buckner; KamilKarut; ThomasP.Freeman; DennisR.Nelson; ThomasJ.Henneberryl

    2003-01-01

    Size and weight measurements were made for all the life stages of Bemisia tabaci (Gennadius) B biotype from field grown cotton ( Gossypium hirsutum L. ) and cantaloupe ( Cucumis melo L., var. cantalupensis )in Phoenix, AZ and Fargo, ND, USA in 2000 and 2001. Nymphal volumes were derived from the measurements.The average nymphal volume increase for settled 1 st to the late 4th instar was exponential. The greatest increase in body volume occurred during development from the 3rd to early 4th instar. Nymphs on cotton leaves were wider,but not longer compared with those on cantaloupe. Ventral and dorsal depth ratios of nymphal bodies from 1st tolate 4th instars from cantaloupe leaves were significantly greater compared with those from cotton leaves. During nymphal development from 1st to 4th instar, the average (from the two host species) ventral body half volume in-creased by nearly 51 times compared with an increase of 28 times for the dorsal body half volume. Adult female and male average lengths, from heads to wing tips, were 1 126 μm and 953 μm, respectively. Average adult fe-male and male weights were 39 and 17 μg, respectively. Average widths, lengths, and weights of eggs from cottonand cantaloupe were, 99 μm, 197 μm, and 0.8 μg, respectively. Average widths, lengths, and weights for exu-viae of non-parasitized nymphs from both cotton and cantaloupe were 492 μm, 673 μm, and 1.20 μg, respective-ly; and widths, lengths, and weights of parasitized nymph exuviae were 452 μm, 665 μm, and 3.62 μg, respec-tively. Both exuviae from non-parasitized and parasitized nymphs from cotton leaves were wider, longer, and heavier than those from cantaloupe leaves.

  2. Response of the polyphagous whitefly Bemisia tabaci B-biotype (Hemiptera: Aleyrodidae) to crop diversification - influence of multiple sensory stimuli on activity and fecundity.

    Science.gov (United States)

    Bird, T L; Krüger, K

    2006-02-01

    A fundamental question concerning crop diversification is which mechanisms determine pest population size in polycultures compared to monocultures. It has been proposed that polyphagous insects experience a difficulty in decision-making when selecting food and oviposition sites in the presence of different host plants. This hypothesis was tested in the extremely polyphagous whitefly Bemisia tabaci (Gennadius) B-biotype, where behaviour (movement) and fecundity of females were compared in choice and no-choice experiments in the laboratory. Two parallel tests, one on different crops, including cucumber, bean and tomato, and one on different tomato cultivars, were conducted using both a mixture of crops and of tomato cultivars, as opposed to the same crop or cultivar respectively. Bemisia tabaci showed a distinct behavioural preference for cucumber when exposed to different crops simultaneously suggesting that B. tabaci has no difficulty in choosing a host plant, i.e. in making a decision, when one of the plants offered in the choice test is a high-ranking host plant. Conversely, when only low-ranking hosts of similar, but not identical, signatures were present, female whiteflies appeared to have difficulty in making a decision, resulting in increased movement and reduced fecundity. This is consistent with both the hypothesis that polyphagous insects have a problem selecting a host plant when given multiple choices and with the hierarchy threshold model, under which egg loads are lessened between periods of searching for better host plants. The study illustrates how insect behaviour can be affected by inter-cropping not only with different crops, but also with different cultivars of the same crop, thus potentially providing a simple and efficient way of reducing whitefly population build-up.

  3. Candida spp. biotypes in the oral cavity of school children from different socioeconomic categories in Piracicaba - SP, Brazil

    Directory of Open Access Journals (Sweden)

    MOREIRA Daniella

    2001-01-01

    Full Text Available Two hundred and thirty-nine (239 Brazilian children, distributed into five distinct socioeconomic categories (A to E were studied. Saliva samples were analyzed as to flow rate, pH, buffer capacity and microbial parameters. The results revealed the presence of Candida spp. in 47.3% of the samples. The most commonly isolated species was C. albicans, in all socioeconomic categories, followed by C. tropicalis, C. krusei and C. parapsilosis. There was no statistical correlation between secretion rate, buffer capacity and Candida spp. CFU/ml. The prevalence of Candida spp. did not differ substantially among the groups; however the microorganisms were more detected in categories B and C. Among all species, C. albicans was the most prevalent. Only 5% of the sample presented more than one species - C. albicans associated with C. tropicalis, C. parapsilosis or C. krusei. It was possible to detect a significant correlation between caries indices and the socioeconomic categories. All categories presented increased caries indices; however the studied population was considered of low caries risk. There was no positive correlation between the presence of Candida and caries risk in the analyzed population.

  4. In vitro adhesiveness and biotype of Gardnerella vaginalis strains in relation to the occurrence of clue cells in vaginal discharges.

    Science.gov (United States)

    Scott, T G; Smyth, C J; Keane, C T

    1987-01-01

    Haemagglutination and tissue culture adherence tests using a McCoy cell line were used to examine the adherence characteristics of 105 strains of Gardnerella vaginalis. Each strain represented one isolate per patient. For each patient, a direct smear of vaginal discharge was examined for clue cells. The relation between in vitro adherence and the presence of clue cells was examined. There seemed to be no appreciable relation between the presence of clue cells in smears and the haemagglutinating activity of strains. In contrast, adherence as judged by the McCoy tissue culture system showed a significant relation to the presence of clue cells (p less than 0.001). Though both adhesive characteristics were not inhibited by mannose, the mechanism of haemagglutination of human red cells appeared to differ from that of adherence of tissue culture cells. The findings imply that the clue cell phenomenon is due to attachment of adherent strains of G vaginalis to epithelial cells. Adherent strains of G vaginalis may play a part in the pathogenesis of bacterial vaginosis. Images PMID:3493202

  5. Effect of dose and application site on quinclorac absorption by barnyardgrass biotypes Efeito de dose e local de aplicação na absorção de quinclorac em biótipos de capim-arroz

    Directory of Open Access Journals (Sweden)

    G. Concenço

    2009-01-01

    Full Text Available This work aimed to evaluate the uptake and translocation of quinclorac in function of application sites (shoot or roots by Echinochloa crusgalli biotypes resistant and susceptible to this herbicide. The treatments consisted of quinclorac doses (0; 0.5; 1; 2; 4; 16 and 64 ppm, applied on the shoot or roots of seedlings of barnyardgrass biotypes. The experimental units consisted of plastic cups containing 250 cm³ of sand. The treatments were applied 10 days after emergence, when barnyardgrass plants reached a 2- to 3- leaf growth stage. The barnyardgrass biotypes were irrigated with nutritive solution weekly and maintained for 40 days after emergence, when length, fresh and dry matter of shoot and roots were evaluated. Variance analysis was carried out using the F test at 5% probability, and in case of significance, a non-linear regression analysis was also carried out using a three-parameter logistic model. In the susceptible biotype, quinclorac was more absorbed by the roots than by the shoot. Comparing dry mass production of the different plant parts of the susceptible biotype per application site, it was verified that quinclorac action is higher when applied to the plant roots. However, for the resistant biotype, it was not possible to determine the dose causing 50% reduction in dry mass accumulation (GR50 and in the resistance index (RI between both biotypes, due to its high resistance to quinclorac (128 times the recommended dosage. The results showed that quinclorac resistance by the evaluated biotype is not due to differences in the absorption site, strongly suggesting that the resistance acquired by the biotype may result from alteration in the target site.Objetivou-se com este trabalho avaliar a absorção e a translocação do quinclorac em função dos locais de aplicação (parte aérea ou raiz em biótipos de capim-arroz (Echinochloa crusgalli resistente e suscetível a esse herbicida. Os tratamentos foram compostos por doses de

  6. Distribuição de glyphosate e acúmulo de nutrientes em biótipos de azevém Glyphosate distribution and nutrient accumulation in ryegrass biotypes

    Directory of Open Access Journals (Sweden)

    E.A. Ferreira

    2008-03-01

    produto.This work aimed to evaluate nutrient accumulation and glyphosate translocation in ryegrass biotypes. Two trials were conducted: in the first, 10 uL of 14C-glyphosate ware applied on the upper side of the first leaf showing completely visible ligule, with ryegrass plants at the three-tiller stage. The amount of glyphosate absorbed, translocated and exudated was evaluated 64 hours after application, by using a liquid scintillation spectrometer. Glyphosate was quantified in the leaf it had been applied, in the tillers, roots and in the nutritive solution the plants were grown. In the second trial, glyphosate was applied on the resistant and the susceptible biotypes at the rate of 480 g L-1. Ten days after application, the shoot and roots were collected and oven-dried and the levels of macronutrients were determined. In the first trial, root exudation was observed in both biotypes, in which the amount of exudated glyphosate was similar and not greater than 5% of the absorbed glyphosate. In the main tiller of the susceptible biotype, a higher concentration of 14C-glyphosate was observed, compared to the resistant one. The resistant biotype showed more glyphosate accumulation in the leaf it had been applied and in the susceptible biotype; most 14-C glyphosate was found in the root system. In the second trial, the susceptible biotype showed less P accumulation than the resistant one. Both the resistant and susceptible biotypes tended to accumulate more total N and inorganic N in the shoot and in the whole plant in the absence of glyphosate, compared to the applied treatments. Both biotypes presented the same absorption capacity and macronutrients accumulation in the absence of the glyphosate.

  7. Isolation World

    OpenAIRE

    2012-01-01

    El trabajo de fin de grado tiene como nombre “Isolation World”, que en su traducción literal significa “Aislamiento del mundo”, un videojuego diseñado y creado desde cero en su totalidad, utilizando herramientas y conocimiento de lógica en programación que se han ido aprendiendo y desarrollando a lo largo de la carrera.

  8. Plasmids in Mycoplasma species isolated from goats and sheep and their preliminary typing

    Directory of Open Access Journals (Sweden)

    Nascimento Elmiro R.

    1999-01-01

    Full Text Available One-hundred-five (105 clinical isolates of mycoplasma from caprine origin and one isolate from ovine were surveyed for plasmids, which were present in thirty-three (31% of them. These mycoplasmas originated from 13 herds. Ten of them were symptomatic for mycoplasmal disease (mastitis, polyarthritis, septicemia and three herds were asymptomatic, i.e., clinically normal. Twenty-eight isolates were Mycoplasma mycoides subspecies mycoides LC (large colony or caprine biotype, four were Mycoplasma capricolum subsp. capricolum and one was Mycoplasma cottewii. The isolated plasmids were linearized by EcoRI, EcoRV, EcoRI and EcoRV or BamHI and EcoRV, and were of five sizes (1.1, 1.6, 1.7, 1.8, and 1.9 Kbp. Based on restriction enzyme digestion and size of the linearized supercoiled extrachromosomal DNA, five plasmid types were recovered (p1II, p2III, p2V, p3I, and p4IV. The small size of these DNA elements probably exclude replicative forms of DNA virus, which are equal or larger than 8.0 Kbp.

  9. Composição química da cera epicuticular de biótipos de azevém resistente e suscetível ao glyphosate Chemical composition of the epicuticular wax of Italian ryegrass biotypes resistant and susceptible to glyphosate

    Directory of Open Access Journals (Sweden)

    A.A. Guimarães

    2009-03-01

    Full Text Available Objetivou-se com este trabalho determinar a composição química da cera epicuticular dos biótipos de azevém (Lolium multiflorum resistente e suscetível ao glyphosate, buscando relações entre suas características e a resistência dos biótipos ao herbicida. A cera epicuticular foi extraída e quantificada e os seus constituintes analisados por cromatografia em fase gasosa, acoplada a espectrômetro de massa (CG-EM. Para determinação da composição química, amostras de lâmina foliar foram retiradas 30 dias após a emergência das plantas, coletando-se a primeira folha com lígula totalmente visível. A quantidade de cera epicuticular extraída não diferiu entre os biótipos. Entre os compostos que constituem a cera epicuticular, os álcoois são os mais abundantes, sendo representados por apenas um composto: o hexacosan-1-ol (46,80% no biótipo resistente e 52,20% no biótipo suscetível. Ao comparar a polaridade da cera epicuticular dos biótipos de azevém, constatou-se que tanto no biótipo resistente quanto no suscetível a cera epicuticular apresentou mais de 50% de componentes polares (álcoois e aldeídos em sua constituição, sendo esse valor igual a 69,80% no biótipo resistente e 64,94% no biótipo suscetível. Por meio da caracterização apresentada, pode-se afirmar que existem pequenas diferenças na cera epicuticular dos biótipos de azevém resistente e suscetível ao glyphosate; o biótipo resistente apresentou grau de polaridade pouco superior ao do biótipo suscetível, porém essa diferença não pode ser considerada marcante a ponto de determinar maior ou menor tolerância de um biótipo ou outro ao herbicida glyphosate.The objective of this work was to determine the chemical composition of epicuticular wax of Italian ryegrass (Lolium multiflorum biotypes resistant and susceptible to glyphosate, searching for relationships between their characteristics and the resistance of the biotypes to the product. The

  10. Isolation and characterisation of lactic acid bacteria from donkey milk.

    Science.gov (United States)

    Soto Del Rio, Maria de Los Dolores; Andrighetto, Christian; Dalmasso, Alessandra; Lombardi, Angiolella; Civera, Tiziana; Bottero, Maria Teresa

    2016-08-01

    During the last years the interest in donkey milk has increased significantly mainly because of its compelling functional elements. Even if the composition and nutritional properties of donkey milk are known, its microbiota is less studied. This Research Communication aimed to provide a comprehensive characterisation of the lactic acid bacteria in raw donkey milk. RAPD-PCR assay combined with 16S rDNA sequencing analysis were used to describe the microbial diversity of several donkey farms in the North West part of Italy. The more frequently detected species were: Lactobacillus paracasei, Lactococcus lactis and Carnobacterium maltaromaticum. Less abundant genera were Leuconostoc, Enterococcus and Streptococcus. The yeast Kluyveromyces marxianus was also isolated. The bacterial and biotype distribution notably diverged among the farms. Several of the found species, not previously detected in donkey milk, could have an important probiotic activity and biotechnological potential. This study represents an important insight to the ample diversity of the microorganisms present in the highly selective ecosystem of raw donkey milk.

  11. Biological aspects of Bemisia tabaci (Genn.) B biotype (Hemiptera: Aleyrodidae) on six bean genotypes; Aspectos biologicos de Bemisia tabaci (Genn.) biotipo B (Hemiptera: Aleyrodidae) em seis genotipos de feijoeiro

    Energy Technology Data Exchange (ETDEWEB)

    Oriani, Maria A. de G. [Universidade Federal de Sao Carlos (UFSCAR), SP (Brazil). Dept. de Ecologia e Biologia Evolutiva; Vendramin, Jose D. [Universidade de Sao Paulo (USP), Piracicaba, SP (Brazil). Escola Superior de Agricultura Luiz de Queiroz (ESALQ). Dept. de Entomologia, Fitopatologia e Zoologia Agricola; Brunherotto, Rogerio [Fundacao Municipal de Ensino Superior de Braganca Paulista, SP (Brazil)

    2008-03-15

    The silverleaf whitefly is one of the most harmful pests that attack bean crops, mainly for extracting large quantities of phloem sap and transmitting the bean golden mosaic virus. Resistant germplasm plants can be an important method for controlling this pest. The biological aspects of Bemisia tabaci B biotype on bean (Phaseolus vulgaris) genotypes were evaluated. The tests were conducted under laboratory conditions, with the following genotypes: Arc 1, Arc 3s, Arc 5s, G13028, G11056 and Porrillo 70. The bean plants in a stage IV-1 were infested during one day with silverleaf white flies. Afterwards the eggs and nymphs were observed until adult emergence. Longevity and fecundity of emerged insects were also evaluated. The longest development time occurred for nymphs fed on Arc 3s genotype (26.5 days), following by G11056 (25.9 days) and G13028 (25.3 days). The development period was 5.5 days longer in Arc 3s when compared with Porrillo 70. Also, the wild genotypes Arc 3s and G11056 showed higher mortality rates (94.7% and 83.1%, respectively), which may suggest antibiosis and/or feeding non preference resistance type. For this reason, although longevity and fecundity were not influenced when the whitefly fed on resistant genotypes (Arc 3s, G11056, G13028 and Arc 5s), those genotypes can be used for bean breeding program towards B. tabaci B biotype. (author)

  12. Uso da água em biótipos de azevém (Lolium multiflorum em condição de competição Water use in italian ryegrass (Lolium multiflorum biotypes under competition

    Directory of Open Access Journals (Sweden)

    G. Concenço

    2007-09-01

    Full Text Available Objetivou-se com este trabalho avaliar as características associadas à eficiência de uso da água em biótipos de azevém resistente e suscetível ao glyphosate, em diferentes níveis de competição. O experimento foi realizado em esquema fatorial 2 x 5, com os dois biótipos de azevém, suscetível e resistente, em planta única no centro da parcela, competindo com 0, 1, 2, 3 e 4 plantas do biótipo oposto. Todas as características matéria seca da parte aérea (MSPA, condutância estomática (Gs, pressão de vapor na câmara subestomática (Ean, gradiente entre temperatura da folha e do ar (deltaT e taxa de transpiração (E foram avaliadas 50 dias após a emergência das plantas, sendo calculada também a eficiência do uso da água (WUE pela relação entre a quantidade de CO2 fixado pela fotossíntese e a quantidade de água transpirada. Foi elaborada ainda uma matriz de correlação entre as variáveis. O biótipo suscetível apresentou maior acúmulo de MSPA, comparado ao biótipo resistente ao glyphosate, quando cultivado livre ou em competição, porém foi menos eficiente quanto ao uso da água.The objective of this work was to evaluate the characteristics associated to water use efficiency in ryegrass biotypes resistant and susceptible to glyphosate, under different competition levels. The trial was installed in factorial scheme (2 x 5, with one plant of the studied biotype alone at the center of the plot, under competition against 0, 1, 2, 3 and 4 plants of the opposite biotype. The variables (shoot dry matter (MSPA, water vapor stomatal conductance (Gs, water vapor pressure from the leaf chamber (Ean, leaf and air temperature difference (deltaT and transpiration rate (E were evaluated 50 days after emergence, with water use efficiency (WUE being obtained by the relation between the amount of CO2 fixed by photosynthesis and the corresponding transpired water. A correlation table was built between all evaluated variables. The

  13. 生物型自锁式人工髋关节假体的改良设计%Modified design of biotype self-locking hip joint prosthesis

    Institute of Scientific and Technical Information of China (English)

    黄伟韬; 李彩华; 蒋托; 杨俊

    2016-01-01

    体的推荐指标。%BACKGROUND:Hip prosthesis needs to meet the good structural compatibility with femoral bone marrow cavity and the biomechanical properties of the original bone tissue. However, the difference of individual anatomical characteristics and the stress concentration in the local area after replacement directly affect postoperative combination of femoral prosthesis stem, force flow transfer and femoral reconstruction, and finaly result in aseptic loosening of hip joint in some patients. OBJECTIVE:To analyze the biomechanical characteristics of modified biotype self-locking hip prosthesis by the method of finite element analysis, and to provide the reference for the application of self-locking hip prosthesis in hip replacement. METHODS:Experimental design contained traditional biotype hip joint prosthesis group and self-locking hip joint prosthesis group. In accordance with the finite element models of self-locking hip prosthesis, 28 kinds of screw fixation were established. Three-dimensional models were generated in the Minics system. After the optimization of prosthesis, prosthesis was designed. In the Solidworks software, the femur was re-positioned and set for contacting set in Ansys to analyze the stress distribution and displacement distribution of the femoral-prosthesis-screw by Ansys. We compared the peak of stress and displacement of the femur and prosthesis, and analyzed the biomechanical stability of prosthesis. RESULTS AND CONCLUSION:(1) By using the Ansys finite element method, we analyzed the stress and displacement distribution of the femoral-prosthesis-screw. The minimum stress peak value of the femur was 15.698 MPa. The minimum stress peak value of prosthesis was 45.491 MPa. The minimum stress peak value of screw was 8.359 MPa. The minimum displacement peak value of femur was 1.125 3 mm. The minimum displacement peak value of prosthesis was 1.039 6 mm. The minimum displacement peak value of screw was 0.566 4 mm. (2) Compared with the traditional biotype hip joint prosthesis group

  14. Resistência de genótipos de feijoeiro a Bemisia tabaci biótipo B Resistance of bean genotypes to Bemisia tabaci biotype B

    Directory of Open Access Journals (Sweden)

    Lucas Castro Torres

    2012-01-01

    Full Text Available O estudo de genótipos de feijoeiro resistentes à mosca-branca Bemisia tabaci (Genn. biótipo B (Hemiptera: Aleyrodidae é de grande importância devido aos danos ocasionados por essa praga à cultura. Neste trabalho, foram estudados a atratividade para adultos, a preferência para oviposição em testes com e sem chance de escolha, o ciclo ovo-adulto e o tipo e número de tricomas presentes nos folíolos. Os experimentos foram realizados em casa de vegetação avaliando-se, inicialmente, cem genótipos de feijoeiro. A resistência do tipo não-preferência para alimentação e/ou antibiose foi observada nos genótipos ARC-3, IAC-Alvorada e Canário 101, sendo a emergência de adultos fortemente influenciada pelos genótipos. Também se observou correlação negativa moderada entre o número de ovos e o número de tricomas glandulares, e correlação positiva muito forte entre o número de ovos e o número de tricomas tectores unciformes.The study of bean genotypes resistant to the whitefly Bemisia tabaci (Genn. B biotype (Hemiptera: Aleyrodidae has been of great importance due to the damage caused by this pest. In this research, bean genotypes were evaluated regarding attractiveness to whitefly adults, the preference for oviposition in free-choice and non choice tests, egg-to-adult development time and characterized for the presence, type and number of trichomes. The experiments were carried out under greenhouse conditions initially evaluating 100 bean genotypes. The non-preference type of resistance for feeding and/or antibiosis was observed in the genotypes ARC-3, IAC-Alvorada and Canário 101, and the emergence of adults was strongly influenced by the genotypes. It was also observed a moderate negative correlation between the number of eggs and the number of glandular trichomes, as well as a very strong positive correlation between the number of eggs and the number of unciform non-glandular trichomes.

  15. High-frequency rugose exopolysaccharide production by Vibrio cholerae strains isolated in Haiti.

    Science.gov (United States)

    Rahman, Mustafizur; Jubair, Mohammad; Alam, Meer T; Weppelmann, Thomas A; Azarian, Taj; Salemi, Marco; Sakharuk, Ilya A; Rashid, Mohammed H; Johnson, Judith A; Yasmin, Mahmuda; Morris, J Glenn; Ali, Afsar

    2014-01-01

    In October, 2010, epidemic cholera was reported for the first time in Haiti in over 100 years. Establishment of cholera endemicity in Haiti will be dependent in large part on the continued presence of toxigenic V. cholerae O1 in aquatic reservoirs. The rugose phenotype of V. cholerae, characterized by exopolysaccharide production that confers resistance to environmental stress, is a potential contributor to environmental persistence. Using a microbiologic medium promoting high-frequency conversion of smooth to rugose (S-R) phenotype, 80 (46.5%) of 172 V. cholerae strains isolated from clinical and environmental sources in Haiti were able to convert to a rugose phenotype. Toxigenic V. cholerae O1 strains isolated at the beginning of the epidemic (2010) were significantly less likely to shift to a rugose phenotype than clinical strains isolated in 2012/2013, or environmental strains. Frequency of rugose conversion was influenced by incubation temperature and time. Appearance of the biofilm produced by a Haitian clinical rugose strain (altered biotype El Tor HC16R) differed from that of a typical El Tor rugose strain (N16961R) by confocal microscopy. On whole-genome SNP analysis, there was no phylogenetic clustering of strains showing an ability to shift to a rugose phenotype. Our data confirm the ability of Haitian clinical (and environmental) strains to shift to a protective rugose phenotype, and suggest that factors such as temperature influence the frequency of transition to this phenotype.

  16. High-frequency rugose exopolysaccharide production by Vibrio cholerae strains isolated in Haiti.

    Directory of Open Access Journals (Sweden)

    Mustafizur Rahman

    Full Text Available In October, 2010, epidemic cholera was reported for the first time in Haiti in over 100 years. Establishment of cholera endemicity in Haiti will be dependent in large part on the continued presence of toxigenic V. cholerae O1 in aquatic reservoirs. The rugose phenotype of V. cholerae, characterized by exopolysaccharide production that confers resistance to environmental stress, is a potential contributor to environmental persistence. Using a microbiologic medium promoting high-frequency conversion of smooth to rugose (S-R phenotype, 80 (46.5% of 172 V. cholerae strains isolated from clinical and environmental sources in Haiti were able to convert to a rugose phenotype. Toxigenic V. cholerae O1 strains isolated at the beginning of the epidemic (2010 were significantly less likely to shift to a rugose phenotype than clinical strains isolated in 2012/2013, or environmental strains. Frequency of rugose conversion was influenced by incubation temperature and time. Appearance of the biofilm produced by a Haitian clinical rugose strain (altered biotype El Tor HC16R differed from that of a typical El Tor rugose strain (N16961R by confocal microscopy. On whole-genome SNP analysis, there was no phylogenetic clustering of strains showing an ability to shift to a rugose phenotype. Our data confirm the ability of Haitian clinical (and environmental strains to shift to a protective rugose phenotype, and suggest that factors such as temperature influence the frequency of transition to this phenotype.

  17. Study of Corynebacterium diphtheriae strains isolated in Romania, northwestern Russia and the Republic of Moldova.

    Science.gov (United States)

    Damian, Maria; Grimont, Francine; Narvskaya, Olga; Straut, Monica; Surdeanu, Maria; Cojocaru, Radu; Mokrousov, Igor; Diaconescu, Angela; Andronescu, Constantin; Melnic, Anatol; Mutoi, Ludmila; Grimont, Patrick A D

    2002-03-01

    A selection of 167 Corynebacterium diphtheriae strains isolated in Romania, the Russian Federation and the Republic of Moldova were analysed by biotyping, phage typing, the toxin production test and by molecular techniques such as ribotyping, pulsed field gel electrophoresis and random amplified polymorphic DNA, in order to establish the epidemiological relatedness, genetic divergence and strain circulation within and between the bordering countries. Using a set of five digoxigenin-labeled oligonucleotides and BstEII digestion, 34 ribotypes were identified. The strains isolated in the epidemic areas (Russia and Moldova) were very closely related but different from those isolated in Romania. C1 and C5 were the main ribotypes identified in these areas. Neither ribotype was found in Romania, where the main circulating types were C3 and C7. Field inversion gel electrophoresis was more discriminative than ribotyping and revealed 54 macrorestriction profiles after SfiI restriction. Both methods showed a significant homogeneity of the strains from epidemic areas and a large diversity among the Romanian strains. Random amplification was useful as an identification method for the epidemic strains, but not for the Romanian ones which displayed a large number of amplification profiles. The phenotypic methods associated with molecular typing techniques enabled distinguishing between strains, detecting the epidemic clone, and sustaining the absence of transmission across borders.

  18. Identificação de biótipos de azevém (Lolium multiflorum resistentes ao herbicida glyphosate em pomares de maçã Identification of glyphosate-resistant ryegrass (Lolium multiflorum biotypes in apple orchards

    Directory of Open Access Journals (Sweden)

    L. Vargas

    2004-12-01

    geral, evidenciam que o biótipo sensível é facilmente controlado com o herbicida glyphosate e pelos demais herbicidas pós-emergentes avaliados, independentemente do estádio vegetativo. Demonstram, ainda, que o biótipo resistente apresenta-se, igualmente ao biótipo sensível, altamente suscetível aos herbicidas com mecanismo de ação distinto daquele do glyphosate. No entanto, o biótipo resistente apresenta baixa resposta ao herbicida glyphosate, mesmo se este for empregado em altas doses, evidenciando ter adquirido resistência a esse produto.Glyphosate is a wide spectrum herbicide used for over 15 years in apple orchards in Vacaria-RS for weed control in rows of trees. Usually, 3 to 4 applications per year are made at a rate of 720 to 1080 g a.e. glyphosate ha-1 (2 to 3 L ha-1 of commercial product. Ryegrass (Lolium multiflorum is a common weed in orchards and traditionally sensitive to glyphosate. However, in the last years, some ryegrass plants have not been found to show significant toxicity symptoms after treatment with glyphosate, suggesting that they acquired resistance to this product. To evaluate the response of a ryegrass plant population to glyphosate, one field and two greenhouse experiments were carried out. The field experiment treatments had increasing rates of glyphosate (0; 360; 720; 1,440; 2,880; 5,760 and 11,520 g a.e. ha-1, in addition to the herbicides paraquat, glufosinate-ammonium, haloxyfop and diclofop-methyl as standards, sprayed at two different vegetative growth stages of ryegrass. The greenhouse experiments had increasing rates of glyphosate (0; 360; 720; 1,440; 2,880 and 5,760 g a.e. ha-1 plus the above listed check herbicides sprayed on biotypes considered resistant and on plants of one susceptible biotype. In the second greenhouse experiment, glyphosate rates (720; 1,440; 2,880; 720 + 720 and 720 + 1,440 g a.e. ha-1 were sprayed in single and sequential applications, in addition to the herbicides paraquat, glufosinate

  19. Adequação de uma dieta artificial para os biótipos "milho" e "arroz" de Spodoptera frugiperda (Lepidoptera: Noctuidae Adaptation of an artificial diet for the biotypes "corn" and "rice" of Spodoptera frugiperda (Lepidoptera: Noctuidae

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    Gustavo Rossato Busato

    2006-01-01

    Full Text Available Spodoptera frugiperda é considerada uma das principais pragas da cultura do milho (lagarta-do-cartucho e do arroz irrigado (lagarta-da-folha, ocasionando altos índices de desfolhamento. O objetivo do estudo foi obter uma dieta artificial adequada para criar os biótipos "milho" e "arroz" de S. frugiperda (J.E. Smith, em laboratório. Os insetos foram coletados em áreas cultivadas com milho e arroz irrigado no ecossistema de várzea e a identificação foi realizada pela análise do DNA genômico. O desenvolvimento dos dois biótipos foi acompanhado sobre a dieta de Greene e a mesma dieta modificada a 25 ± 1ºC, UR de 70 ± 10% e fotofase de 14 horas. O estudo foi realizado com 150 lagartas por dieta, individualizadas em tubos de vidro e contendo dieta artificial. Por ocasião da emergência, 20 casais foram individualizados e alimentados com solução aquosa de mel a 10%. A dieta Greene possibilitou melhor desenvolvimento dos dois biótipos, proporcionando maior velocidade de desenvolvimento, maior massa de lagartas no máximo desenvolvimento, massa de pupas e fecundidade total, além de valores mais elevados da taxa líquida de reprodução, taxa intrínseca de crescimento e taxa finita de aumento.Spodoptera frugiperda is considered one of the main pest in corn and irrigated rice (fall armyworm crops, causing high leaf losses. The objective of this study was to obtain an appropriate artificial diet to rear the biotypes "corn" and "rice" of S. frugiperda in laboratory. The insects were collected in areas cultivated with corn and irrigated rice in the meadow ecosystem and the identification was accomplished by the analysis of the DNA genomic. The development of the two biotypes was accompanied on Greene's diet and the same diet modified to 25 ± 1ºC, UR of 70 10% and fotofase of 14 hours. The study was accomplished with 150 larvae by diet individualized in glass tubes containing artificial diet. At emergency 20 couples were individualized

  20. 混合型与生物型人工全髋关节置换术后并发异位骨化的比较%Comparison of Incidence of Heterotopic Ossification in Combination Versus Biotype Total Hip Arthroplasty

    Institute of Scientific and Technical Information of China (English)

    黄伟敏; 于秀淳; 付志厚; 孙海宁

    2011-01-01

    Objective To compare the frequency of heterotopic ossification in patients with a vascular necrosis of femoral head who underwent combination or biotype total hip arthroplasty. Methods Seventy six patients who underwent combination prosthesis (cohort A) individually matched 76 patients with biotype prosthesis (cohort B). The match parameters were age (±5 years), sex and weight (±10 kg). The radiographs at 3 months and 12 months after the operation were used to evaluate the heterotopic ossification by Brooker classification. Results There were 21 cases of HO in cohort A, while 30 cases in cohort B. The ratio of HO was 27.63% and 39.47% respectively. Conclusion There are no significant statistic differences in the prevalence of heterotopic ossification between combination and biotype total hip arthroplasty in patients with avascular necrosis of femoral head. Fear of heterotopic ossification should not be a factor in the choice of fixation for THA.%目的 研究使用混合型与生物型假体的全髋关节置换术(THA)术后异位骨化(H0)的情况.方法 回顾性研究自2004年1月~2010年1月行初次单侧人工THA患者,从中配对选取76对,配对的参数为年龄、性别、体重.A组患者行混合型人工THA,B组患者行生物型人工THA.HO诊断依据术后3个月和12个月的髋关节前后位X线片,按Brooker分级记录.结果 A组发生HO的例数为21例,总发生率27.63%,B组发生HO例数为30例,总发生率为39.47%,两者差异无统计学意义.结论 混合型与生物型人工THA术后HO的发生率没有明显差异.

  1. Parâmetros biológicos de Bemisia Tabaci (genn. biótipo B (hemiptera: aleyrodidae em genótipos de algodoeiro Biological parameters of Bemisia Tabaci B biotype on cotton genotypes

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    Zeneide Ribeiro Campos

    2009-01-01

    Full Text Available A mosca-branca Bemisia tabaci biótipo B é uma praga de grande importância econômica para muitas culturas em todo o mundo. No Brasil, especialmente no Estado da Bahia, essa praga causou perdas que variam entre 30% e 70% em cultura de algodão. Essa pesquisa foi desenvolvida com o objetivo de avaliar parâmetros biológicos de B. tabaci biótipo B em genótipos de algodoeiro para verificar a possível ocorrência de antibiose como mecanismo de resistência sob condições de casa de vegetação. Os genótipos estudados foram IAC-23, Coodetec 406, BRS Aroeira, Fabrika, Coodetec 407, IAC-24, Makina, IAC 20-233, Coodetec 401 e CNPA Acala I. Foram avaliados os períodos de incubação e ninfal, o desenvolvimento total e a longevidade. Dos genótipos avaliados observou-se em Coodetec 406 maior período ninfal (14,7 dias e IAC-23 a menor viabilidade de ninfas (30,7%, indicando a ocorrência de resistência do tipo antibiose contra essa mosca-branca.The silverleaf whitefly Bemisia tabaci B biotype is an important pest of many crops throughout the world. In Brazil, specifically in the Bahia State, this insect caused losses estimated to 30-70% on cotton crops. The purpose of this research was to investigate biological parameters of the silverleaf whitefly biotype B in genotype of cotton bush to verify a possible occurrence of antibiosis as resistance mechanism cotton, under greenhouse conditions. The duration of the egg and nymphal stages, and the adult longevity of B. tabaci biotype B were evaluated in the genotypes IAC-23, Coodetec 406, BRS Aroeira, Fabrika, Coodetec 407, IAC-24, Makina, IAC 20-233, Coodetec 401 and CNPA Acala I. Among those evaluated genotypes, Coodetec 406 increased the nymph stage (14.7 days and IAC-23 reduced the nymphal viability (30.7%, suggesting the occurrence of antibiosis against this whitefly.

  2. Análise do risco da ocorrência de biotipos de plantas daninhas resistentes aos herbicidas The risk of finding herbicide resistant weed biotypes

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    Ribas A. Vidal

    1997-01-01

    biotype depends on two aspects : the probability of selecting a herbicide resistant mutant, and the probability of spreading the resistance in the area. The objectives of this work were to study factors that control the probability of selecting a herbicide resista NT mutant, and to predict the risk of selecting a resistant plant. The factors that control the probability of selecting a herbicide resistant mutant are grouped in three categories: those related to the genetics of resistance, those related to the number of plants under selection, and thoserelated to the herbicide. The genetics of resistance is governed by the initial frequency of the resista nt allele, dominance of the gene, and type of species pollination. The number of plants under selection depend on size of the herbicide treated area and weed density. The factors related to the herbicide are its mechanism of action, and frequency of use of the same mechanism of action in the area. Computer simulations indicate great risk of occurrence of a resistant mutant in áreas with high weed density, mainly those sprayed with herbicides whose mechanisms of action present history of high initial frequency of the resistant trait on the weed populations.

  3. New biotypes of Metarhizium anisopliae var. anisopliae E9 strain with altered conidial germination, obtained by exposition to gamma radiation; Novos biotipos de Metarhizium anisopliae var. anisopliae (Metsch.) Sorokin com germinacao alterada de conidios, obtidos pela exposicao a radiacao gama

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    Oliveira, M.G.; Oliveira, N.T.; Luna Alves Lima, E.A. [Pernambuco Univ., Recife, PE (Brazil). Centro de Ciencias Biologicas. Dept. de Micologia

    1997-12-31

    Conidia produced by a wild strain (E9) of the entomopathogenic fungus M. anisopliae var anisopliae were exposed to gamma radiation in order to obtain new biotypes. At the 390 Gy dose there were obtained 48 colonies (MaE). On complete medium, 5 colonies (MaE 01, MaE 10, MaE 15, MaE 40) presented morphological changes in color while the colony MaE 24 lost its esporulation capacity. Twenty six colonies presented mycelial growth significantly different from the wild strain, after 12 days of incubation. Twelve colonies showed average of conidial germination different from the wild strain, after 12 days of incubation on liquid minimum medium at 25 deg C. The colony MaE started germination precociously after 5 hours of incubation. (author) 31 refs., 1 fig., 4 tabs.

  4. A comparative study of the removal of endosymbionts in Bemisia tabaci biotypes B and Q using three antibiotics%三种抗生素对B型和Q型烟粉虱内共生菌的去除效果比较研究

    Institute of Scientific and Technical Information of China (English)

    苏奇; 潘慧鹏; 王少丽; 吴青君; 徐宝云; 张友军

    2012-01-01

    利用烟粉虱Bemisia tabaci (Gennadius)内共生菌特异性引物,研究了内共生菌在B、Q型烟粉虱种群中的分布和感染率,同时评价了3种不同的抗生素利福平、氨苄青霉素和硫酸卡那霉素分别在3种不同的浓度下(100.0、50.0及25.0 μg/mL)对烟粉虱内共生菌的去除效果.结果表明:B、Q型烟粉虱原生内共生细菌Portiera 的带菌率均为100.0%;B、Q型烟粉虱次生内共生菌Hamiltonella的带菌率分别为91.7%和100.0%;B型烟粉虱次生内共生菌Rickettsia的带菌率为87.5%,Q型为0;其它次生内共生菌在B、Q型烟粉虱中均未检测到.利福平、氨苄青霉素和硫酸卡那霉素在3种不同的浓度下均不能去除B、Q型烟粉虱Portiera;利福平、氨苄青霉素在3种不同的浓度下均能完全去除B型烟粉虱Rickettsia,硫酸卡那霉素在不同浓度下去除Rickettsia的效果不同;3种抗生素去除Hamiltonella的能力受抗生素种类以及浓度的影响.同一抗生素在不同浓度下去除Hamiltonella的效果均是100.0 μg/mL >50.0 μg/mL >25.0 μg/mL;不同浓度的抗生素去除Hamiltonella的效果均是利福平>氨苄青霉素>硫酸卡那霉素,各浓度与各抗生素之间的去除Hamiltonella的效果均具有显著性差异.%A PCR survey of endosymbionts in one B and one Q Bemisia tabaci biotype was conducted. Kanamycin sulfate, ampicillin trihydrate, and rifampicin were used to investigate the sensitivity of endosymbionts in the two biotypes to antibiotics. The results show that 100% of all individuals of the both biotypes had Portiera. Hamiltonella was also found in both biotypes, with an infection frequency of 91. 7% and 100.0%, respectively. Rickettsia was only detected in 87.5% of the B biotype. Other endosymbionts including Wolbachia, Fritschea, Arsenophonus, and Cardinium were not detected in either biotype. The three antibiotics failed to eliminated Portiera from any individual of the B and Q biotypes

  5. Pathophysiological and immune cell responses in calves prior to and following lung challenge with formalin-killed Pasteurella multocida biotype A:3 and protection studies involving subsequent homologous live challenge.

    Science.gov (United States)

    Dowling, A; Hodgson, J C; Dagleish, M P; Eckersall, P D; Sales, J

    2004-08-01

    Pneumonic pasteurellosis is a common respiratory infection in cattle that has major economic and welfare implications world-wide and the incidence in the UK due to Pasteurella multocida, currently the same as that associated with Mannheimia haemolytica, is increasing. Whereas much is known regarding the pathogenesis of M. haemolytica infections little information is available on the pathogenic process of pasteurellosis initiated by P. multocida. In the present work calf systemic and innate immune responses to intratracheal challenge with formalin-killed P. multocida biotype A:3 and to subsequent experimental lung infection with live P. multocida were investigated. Eight-week-old calves were challenged intratracheally on day 0 with either 10(9) colony forming units (cfu) of formalin-killed P. multocida biotype A:3 in 300 ml saline (n = 10) or 300 ml saline alone (n = 10), followed, at day 21, by challenge with 10(9) cfu live P. multocida. Pathophysiological and lung phagocyte responses were assessed by clinical monitoring, sequential lung lavage and blood sampling. Results for samples obtained before, during and after challenge showed clinical and acute phase protein responses to both bacterial culture and saline control treatments, although higher responses were associated with bacterial challenge. Phagocytosis of P. multocida during 1h incubation periods with lavaged cells in vitro was unaffected by exposure in vivo to killed P. multocida and there was evidence that P. multocida was able to survive intracellularly during this assay. There was no indication that lung exposure to formalin-killed P. multocida conferred protection against subsequent homologous live challenge.

  6. Isolated sleep paralysis

    Science.gov (United States)

    Sleep paralysis - isolated; Parasomnia - isolated sleep paralysis ... Episodes of isolated sleep paralysis last from a few seconds to 1 or 2 minutes. During these episodes the person is unable to move ...

  7. Clinical isolates of Vibrio cholerae O1 El Tor Ogawa of 2009 from Kolkata, India: preponderance of SXT element and presence of Haitian ctxB variant.

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    Braj M R N S Kutar

    Full Text Available BACKGROUND: Increase in the number of multidrug resistant pathogens and the accompanied rise in case fatality rates has hampered the treatment of many infectious diseases including cholera. Unraveling the mechanisms responsible for multidrug resistance in the clinical isolates of Vibrio cholerae would help in understanding evolution of these pathogenic bacteria and their epidemic potential. This study was carried out to identify genetic factors responsible for multiple drug resistance in clinical isolates of Vibrio cholerae O1, serotype Ogawa, biotype El Tor isolated from the patients admitted to the Infectious Diseases Hospital, Kolkata, India, in 2009. METHODOLOGY/PRINCIPAL FINDINGS: One hundred and nineteen clinical isolates of V. cholerae were analysed for their antibiotic resistance phenotypes. Antibiogram analysis revealed that majority of the isolates showed resistance to co-trimoxazole, nalidixic acid, polymixin B and streptomycin. In PCR, SXT integrase was detected in 117 isolates and its sequence showed 99% identity notably to ICEVchInd5 from Sevagram, India, ICEVchBan5 from Bangladesh and VC1786ICE sequence from Haiti outbreak among others. Antibiotic resistance traits corresponding to SXT element were transferred from the parent Vibrio isolate to the recipient E. coli XL-1 Blue cells during conjugation. Double-mismatch-amplification mutation assay (DMAMA revealed the presence of Haitian type ctxB allele of genotype 7 in 55 isolates and the classical ctxB allele of genotype 1 in 59 isolates. Analysis of topoisomerase sequences revealed the presence of mutation Ser83 → Ile in gyrA and Ser85→ Leu in parC. This clearly showed the circulation of SXT-containing V. cholerae as causative agent for cholera in Kolkata. CONCLUSIONS: There was predominance of SXT element in these clinical isolates from Kolkata region which also accounted for their antibiotic resistance phenotype typical of this element. DMAMA PCR showed them to be a mixture

  8. Methicillin-resistant Staphylococcus aureus (MRSA) isolated from animals and veterinary personnel in Ireland.

    Science.gov (United States)

    O'Mahony, R; Abbott, Y; Leonard, F C; Markey, B K; Quinn, P J; Pollock, P J; Fanning, S; Rossney, A S

    2005-08-30

    Reports of methicillin-resistant Staphylococcus aureus (MRSA) in animals have become more frequent in recent years. This paper documents the recovery of MRSA from animals with respiratory, urinary tract or wound infection and from animals subjected to surgical procedures following treatment in one veterinary hospital and 16 private veterinary clinics in different geographical locations throughout Ireland. MRSA was recovered from 25 animals comprising 14 dogs, eight horses, one cat, one rabbit and a seal, and also from 10 attendant veterinary personnel. Clinical susceptibility testing suggested that the 35 isolates fell into two different groups. One group of isolates (Group 1) was resistant to one or more of the following classes of antimicrobials: macrolides, lincosamines, tetracyclines and/or fluoroquinolones. The second group (Group 2) was resistant to macrolides, aminoglycosides, tetracyclines and trimethoprim/sulphamethoxazole and variably resistant to fluoroquinolones, lincosamines and rifampicin. One isolate in Group 2 was susceptible to trimethoprim. Epidemiological typing by antibiogram-resistogram (AR) typing, biotyping and by chromosomal DNA restriction fragment length polymorphism analysis using SmaI digestion followed by pulsed field gel electrophoresis (PFGE), confirmed these two major clusters. PFGE analysis showed that most isolates from non-equine animals were indistinguishable from each other and from the isolates from personnel caring for these animals. MRSA was isolated from eight horses which attended six different veterinary practices before referral to an equine veterinary hospital. Isolates from the eight horses and from their attendant personnel had PFGE patterns that were indistinguishable and were unlike the patterns obtained from the other isolates. Comparison of PFGE patterns of isolates from veterinary sources with patterns from MRSA recovered in human hospitals showed that the most frequently occurring pattern of MRSA from non

  9. Biochemical and full genome sequence analyses of clinical Vibrio cholerae isolates in Mexico reveals the presence of novel V. cholerae strains.

    Science.gov (United States)

    Díaz-Quiñonez, José Alberto; Hernández-Monroy, Irma; Montes-Colima, Norma Angélica; Moreno-Pérez, María Asunción; Galicia-Nicolás, Adriana Guadalupe; López-Martínez, Irma; Ruiz-Matus, Cuitláhuac; Kuri-Morales, Pablo; Ortíz-Alcántara, Joanna María; Garcés-Ayala, Fabiola; Ramírez-González, José Ernesto

    2016-05-01

    The first week of September 2013, the National Epidemiological Surveillance System identified two cases of cholera in Mexico City. The cultures of both samples were confirmed as Vibrio cholerae serogroup O1, serotype Ogawa, biotype El Tor. Initial analyses by PFGE and by PCR-amplification of the virulence genes, suggested that both strains were similar, but different from those previously reported in Mexico. The following week, four more cases were identified in a community in the state of Hidalgo, located 121 km northeast of Mexico City. Thereafter a cholera outbreak started in the region of La Huasteca. Genomic analyses of the four strains obtained in this study confirmed the presence of Pathogenicity Islands VPI-1 and -2, VSP-1 and -2, and of the integrative element SXT. The genomic structure of the 4 isolates was similar to that of V. cholerae strain 2010 EL-1786, identified during the epidemic in Haiti in 2010.

  10. Identification of blood culture isolates directly from positive blood cultures by use of matrix-assisted laser desorption ionization-time of flight mass spectrometry and a commercial extraction system: analysis of performance, cost, and turnaround time.

    Science.gov (United States)

    Lagacé-Wiens, Philippe R S; Adam, Heather J; Karlowsky, James A; Nichol, Kimberly A; Pang, Paulette F; Guenther, Jodi; Webb, Amanda A; Miller, Crystal; Alfa, Michelle J

    2012-10-01

    Matrix-assisted laser desorption ionization-time of flight (MALDI-TOF) mass spectrometry represents a revolution in the rapid identification of bacterial and fungal pathogens in the clinical microbiology laboratory. Recently, MALDI-TOF has been applied directly to positive blood culture bottles for the rapid identification of pathogens, leading to reductions in turnaround time and potentially beneficial patient impacts. The development of a commercially available extraction kit (Bruker Sepsityper) for use with the Bruker MALDI BioTyper has facilitated the processing required for identification of pathogens directly from positive from blood cultures. We report the results of an evaluation of the accuracy, cost, and turnaround time of this method for 61 positive monomicrobial and 2 polymicrobial cultures representing 26 species. The Bruker MALDI BioTyper with the Sepsityper gave a valid (score, >1.7) identification for 85.2% of positive blood cultures with no misidentifications. The mean reduction in turnaround time to identification was 34.3 h (P blood cultures and 26.5 h in a more practical setting where conventional identification or identification from subcultures was required for isolates that could not be directly identified by MALDI-TOF. Implementation of a MALDI-TOF-based identification system for direct identification of pathogens from blood cultures is expected to be associated with a marginal increase in operating costs for most laboratories. However, the use of MALDI-TOF for direct identification is accurate and should result in reduced turnaround time to identification.

  11. 两种体色生物型桃蚜对杀虫剂敏感性差异及其与酶活力的关系%The sensitivity of two body colour bio-types of the green peach aphid Myzus persicae (Sulzer) (Hemiptera: Aphididae) to the pesticides and its correlation to enzyme activity

    Institute of Scientific and Technical Information of China (English)

    宫亚军; 王泽华; 石宝才; 姜春燕; 康总江; 金桂华; 魏书军

    2013-01-01

    In order to survey the difference of sensitivity to insecticides between the two body colour bio -types of the green peach aphid Myzus persicae (Sulzer) (Hemiptera:Aphididae),the bioassay was conducted in the laboratory,and three detoxifying enzymes and acetylcholinesterase activities of the two colour bio-types were tested.The results showed that the green bio-type was more sensitive to the insecticides than the red bio-type.There was a significant difference in the sensitivity to the imidacloprid between the red bio-type and green bio-type.The LC50 of red bio-type was 23.88 times higher than that of the green bio-type with the value was 679.6648 and 28.4597 mg/L,respectively.The difference of the sensitivity to chlorpyrifos between two body colour bio-types was moderate.The LC50 of red bio-type was 6.35 times higher than that of the green bio-type with the value was 1229.5798 and 193.6816 mg/L,respectively.There was a little difference in the sensitivity to the abamectin between the two body colour bio-types.The LC50 of red bio-type was 1.07 times as much as that of the green bio-type with the value was 31.1678 and 29.0966 mg/L,respectively.The esterase,glutathione-S-transferase and mixed function oxidase specific activity of red bio-type was extraordinarily higher than that of the green bio-type.The esterase,glutathione-S-transferase and mixed function oxidase specific activity of the red bio-type were 3.1,4.1 and 1.5 times as much as that of the green bio-type,respectively,whereas there was no difference in the acetylcholinesterase specific activity between the two body colour bio-types of M.persicae,indicating that the acetylcholinesterase specific activity was not correlate with the sensitivity to the insecticides.%为了明确不同体色生物型桃蚜Myzus persicae(Suizer)对药剂的敏感性差异,本文采用室内生物测定和酶活力测定法检测不同体色生物型桃蚜对杀虫剂的敏感性以及与3种解毒酶和1种靶标酶活力关

  12. Potential Role of Yeast Strains Isolated from Grapes in the Production of Aglianico of Taurasi DOCG

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    Maria eAponte

    2016-05-01

    Full Text Available Twelve samples of Aglianico grapes, collected in different locations of the Taurasi DOCG (Appellation of Controlled and Guaranteed Origin production area were naturally fermented in sterile containers at room temperature. A total of 70 yeast cultures were isolated from countable WL agar plates: 52 in the middle of the fermentation and 18 at the end. On the basis of ITS-RFLP analysis and ITS sequencing, all cultures collected at the end of fermentations were identified as Saccharomyces (S. cerevisiae; while, the 52 isolates, collected after one week, could be referred to the following species: Metschnikowia (M. pulcherrima; Starmerella (Star. bacillaris; Pichia (P. kudriavzevii; Lachancea (L. thermotolerans; Hanseniaspora (H. uvarum; Pseudozyma (Pseud. aphidis; S. cerevisiae. By means of Interdelta analysis, 18 different biotypes of S. cerevisiae were retrieved. All strains were characterized for ethanol production, SO2 resistance, H2S development, β-glucosidasic, esterasic and antagonistic activities. Fermentation abilities of selected strains were evaluated in micro-fermentations on Aglianico must. Within non-Saccharomyces species, some cultures showed features of technological interest. Antagonistic activity was expressed by some strains of M. pulcherrima, L. thermotolerans, P. kudriavzevii and S. cerevisiae. Strains of M. pulcherrima showed the highest β-glucosidase activity and proved to be able to produce high concentrations of succinic acid. L. thermotolerans produced both succinic and lactic acids. The lowest amount of acetic acid was produced by M. pulcherrima and L. thermotolerans; while the highest content was recorded for H. uvarum. The strain of Star. bacillaris produced the highest amount of glycerol and was able to metabolize all fructose and malic acid. Strains of M. pulcherrima and H. uvarum showed a low fermentation power (about 4%, while, L. thermotolerans, Star. bacillaris and P. kudriavzevii of about 10%. Significant

  13. Antibiotic resistance patterns in fecal bacteria isolated from Christmas shearwater (Puffinus nativitatis) and masked booby (Sula dactylatra) at remote Easter Island.

    Science.gov (United States)

    Ardiles-Villegas, Karen; González-Acuña, Daniel; Waldenström, Jonas; Olsen, Björn; Hernández, Jorge

    2011-09-01

    Antibiotic use and its implications have been discussed extensively in the past decades. This situation has global consequences when antibiotic resistance becomes widespread in the intestinal bacterial flora of stationary and migratory birds. This study investigated the incidence of fecal bacteria and general antibiotic resistance, with special focus on extended spectrum beta-lactamase (ESBL) isolates, in two species of seabirds at remote Easter Island. We identified 11 species of bacteria from masked booby (Sula dactylatra) and Christmas shearwater (Puffinus nativitatis); five species of gram-negative bacilli, four species of Streptococcus (Enterococcus), and 2 species of Staphylococcus. In addition, 6 types of bacteria were determined barely to the genus level. General antibiotic susceptibility was measured in the 30 isolated Enterobacteriaceae to 11 antibiotics used in human and veterinary medicine. The 10 isolates that showed a phenotypic ESBL profile were verified by clavulanic acid inhibition in double mixture discs with cefpodoxime, and two ESBL strains were found, one strain in masked booby and one strain in Christmas shearwater. The two bacteria harboring the ESBL type were identified as Serratia odorifera biotype 1, which has zoonotic importance. Despite minimal human presence in the masked booby and Christmas shearwater habitats, and the extreme geographic isolation of Easter Island, we found several multiresistant bacteria and even two isolates with ESBL phenotypes. The finding of ESBLs has animal and public health significance and is of potential concern, especially because the investigation was limited in size and indicated that antibiotic-resistant bacteria now are distributed globally.

  14. Análise de crescimento de biótipos de leiteira (Euphorbia heterophylla resistentes e suscetível aos herbicidas inibidores da ALS Growth analysis of resistant and susceptible wild poinsettia (Euphorbia heterophylla biotypes to ALS-inhibiting herbicides

    Directory of Open Access Journals (Sweden)

    R.A. Vidal

    2000-01-01

    Full Text Available Foram conduzidos dois experimentos em condições de casa de vegetação, com o objetivo de analisar comparativamente o crescimento de três biótipos de leiteira (Euphorbia heterophylla - EPHHL resistentes (R (Passo Fundo, Não-Me-Toque e Rio Pardo e um suscetível (S (Porto Alegre aos herbicidas inibidores da ALS, por meio do cálculo da taxa de crescimento relativo (TCR e dos índices que a compõem. Utilizou-se o delineamento experimental completamente casualizado, com três repetições e tratamentos organizados em fatorial 2 x 4 x 4, em que o fator A correspondeu às duas estações de crescimento (outono e primavera, o fator B aos quatro biótipos de EPHHL e o fator C às quatro épocas de determinação dos índices de crescimento das plantas de leiteira - no primeiro experimento, aos 15, 25, 35 e 45, e, no segundo, aos 23, 33, 43 e 53 dias após a emergência (DAE. No experimento realizado no outono não houve interação entre época de avaliação e biótipo nem efeito simples de biótipo. No experimento realizado na primavera, a razão de peso foliar (RPF do biótipo de Não-Me-Toque foi superior em média à dos demais biótipos; a razão de área foliar (RAF foi superior no biótipo de Não-Me-Toque aos 23 e 53 DAE; e não houve diferenças da TAL e TCR entre os biótipos. Esses resultados sugerem produtividade semelhante entre os biótipos R e S e, portanto, sua equivalência competitiva.Two trials were carried out under greenhouse conditions to compare the development of three ALS inhibitor herbicides resistant (R wild poinsettia (Euphorbia heterophylla biotypes (Passo Fundo, Não-Me-Toque and Rio Pardo - RS - Brazil and one susceptible (S (Porto Alegre - RS - Brazil using relative growth rate (RGR and related indices. The experiment was arranged as a completely randomized design, with three replications, in a 2 x 4 x 4 factorial, where factor A was two growth seasons (fall and spring; factor B, four biotypes of wild poinsettia

  15. Resistência de biótipos de Euphorbia heterophylla l. Aos herbicidas inibidores da enzima ALS utilizados na cultura de soja Resistance of Euphorbia heterophylla l. Biotypes to ALS enzyme inhibitor herbicides used in soybean crop

    Directory of Open Access Journals (Sweden)

    GERSON AUGUSTO GELMINI

    2001-01-01

    induce selection of resistant biotypes, such as occurred to Euphorbia heterophylla L. in relation to ALS enzyme inhibitors, in areas of the Paraná and Rio Grande do Sul States, in Brazil. In order to verify possible new cases of resistant populations and to test alternative herbicide treatments to manage this population, seeds of E. heterophylla were collected in the Assis region, State of São Paulo, Brazil, in areas where plants of this species had survived to continuous herbicides application. The trial was carried out in glasshouse conditions where biotypes with a history of suspected resistance were compared with a known susceptible biotype. The study used several post-emergence herbicides sprayed at zero, one, two, four and eight times the recommended field application rates of these products. Twenty days after application, the plants were harvested and the percentage of control and the fresh weight were determined to establish the dose-response curves, to get the resistance factor using data of DL50 and GR50 and to verify if there was a multiple resistance. The resistant biotype showed different resistance levels to chlorimuron-ethyl and imazethapyr, showing cross-resistance to sulfonylurea and imidazolinone groups. Nevertheless, this biotype was efficiently controlled by fomesafen (250 g.ha-1, lactofen (120 g.ha-1, flumiclorac-pentil (40 g.ha-1, ammonium-gluphosinate (150 g.ha-1 and glyphosate (360 g.ha-1.

  16. Development of species-specific PCR primers and polyphasic characterization of Lactobacillus sanfranciscensis isolated from Korean sourdough.

    Science.gov (United States)

    Lee, Hyeongrho; Baek, Hyunwook; Lim, Sae Bom; Hur, Jin Soo; Shim, Sangmin; Shin, So-Yeon; Han, Nam Soo; Seo, Jin-Ho

    2015-05-04

    Lactobacillus sanfranciscensis is a bacterium used in sourdough that provides desirable properties such as better flavor and texture to the sourdough bread. Here, the intra-species diversity of L. sanfranciscensis strains isolated from Korean sourdough was studied using genotypic (multiplex-RAPD-PCR: multiplex-Randomly Amplified Polymorphic DNA-polymerase chain reaction) and phenotypic (VITEK2 Compact system) analyses. For this, a novel species-specific set of PCR primers was developed to identify L. sanfranciscensis using the recently published genome database. The primers were able to detect L. sanfranciscensis isolated from Korean sourdough with 100% accuracy. Genotyping and phenotyping analyses at the strain level demonstrated that Korean sourdough possesses various biotypes of L. sanfranciscensis strains. These strains were clustered into 5 subtypes (genotyping) or 7 subtypes (phenotyping). In summary, this strategy to construct novel primers reduced the chance of cross amplification and was able to identify the desired strain. The various strains isolated in this study can be used to develop a sourdough starter after the analysis of their fermentation characteristics.

  17. Cholera outbreaks caused by an altered Vibrio cholerae O1 El Tor biotype strain producing classical cholera toxin B in Vietnam in 2007 to 2008.

    Science.gov (United States)

    Nguyen, Binh Minh; Lee, Je Hee; Cuong, Ngo Tuan; Choi, Seon Young; Hien, Nguyen Tran; Anh, Dang Duc; Lee, Hye Ri; Ansaruzzaman, M; Endtz, Hubert P; Chun, Jongsik; Lopez, Anna Lena; Czerkinsky, Cecil; Clemens, John D; Kim, Dong Wook

    2009-05-01

    Vibrio cholerae O1 isolates collected during cholera outbreaks occurring from late 2007 to early 2008 in northern Vietnam were revealed to represent an altered strain containing the RS1 element followed by a CTX prophage harboring El Tor type rstR and classical ctxB on the large chromosome.

  18. Differential reactions of soybean isolines with combinations of aphid resistance genes Rag1, Rag2, and Rag3 to four soybean aphid biotypes

    Science.gov (United States)

    With the discovery of the soybean aphid (Aphis glycines Matsumura) as a devastating insect pest of soybean (Glycine max (L.) Merr.) in the United States, host resistance was recognized as an important management option. However, the identification of soybean aphid isolates exhibiting strong virulenc...

  19. Toxicity of spirotetramat to Bemisia tabaci biotype B and the impact on the biological parameters%螺虫乙酯对B型烟粉虱毒力及部分生物学参数的影响

    Institute of Scientific and Technical Information of China (English)

    戈大庆; 姜兴印; 王燕; 李俊虎; 段强

    2011-01-01

    In order to value the bioactivity and impact on the biology of spirotetramat against Bemisia tabaci biotype B, the toxicity of spirotetramat and imidacloprid (control agent) to different instar nymphs of B. tabaci biotype B and the effects of the longevity, fecundity and eggs hatchability were measured in the laboratory by using egg-dipping and leaf-dipping. The toxicity of the 2nd instar nymph is high after treatment by spirotetramat, the LCso was 4.07 mg/L, it was 2.73 times to the toxicity of imidacloprid, toxicity was low to the eggs and adults, and lower than that of imidacloprid. Longevity of the B. tabaci biotype B was 17.3 days after treatment with 12.5 mg/L spirotetramat, it was significantly shorted compared with the contrast experiment (treatment without pesticides), while imidacloprid was insignificant. The fecundity was 5 and the eggs hatching rate was 3.23% after treatment with 12.5 mg/L spirotetramat, which has significantly inhibition to the fecundity and the eggs hatching, and it was significantly lower than those treated with imidacloprid and the contrast experiment. It was no significant differences between imidacloprid and the contrast experiment. The repellent action was 52% to the adults of spirotetramat after 24 h treated with 100 mg/L spirotetramat, and the repellent action was not very good.%为系统评价新药剂螺虫乙酯(spirotetramat)对B型烟粉虱(Bem isia tabacibiotype B)的生物活性及生物学参数的影响,采用浸渍法测定了螺虫乙酯及对照药剂吡虫啉对B型烟粉虱各个虫态的室内毒力、成虫寿命、产卵量及所产卵孵化率的影响。结果表明,螺虫乙酯对2龄若虫毒力最高,LC50为4.07mg/L,为吡虫啉的2.73倍,对卵及成虫毒力较低,且显著低于吡虫啉;12.5 mg/L螺虫乙酯处理后,成虫寿命为17.3天,较空白对照显著缩短,吡虫啉与空白对照无显著差异;12.5mg/L螺虫乙酯处理后平均产卵量为5.0粒,所

  20. Análisis de la sensibilidad de biotipos de Lolium multiflorum a herbicidas inhibidores de la enzima ALS, ACCasa y Glifosato Sensitivity analysis of Lolium multiflorum biotypes to Glyphosate, ACCase and ALS-inhibiting herbicides

    Directory of Open Access Journals (Sweden)

    P. Diez De Ulzurrun

    2012-09-01

    . multiflorum of Loberia (Buenos Aires, Argentina. Bioassays were conducted in Petri dishes and the GR50 was determined by the length of coleoptile. Curves dose-response were obtained using the log-logistic equation. The LmR biotype survived under multiple herbicides of three different modes of action, glyphosate, ALS and ACCase inhibitors. This test showed the appearance of a biotype of L. multiflorum with resistance to multiple active ingredients.

  1. Controle químico de ovos e ninfas de Bemisia tabaci biótipo B (Hemiptera: aleyrodidae Chemical control of Bemisia tabaci B biotype (Hemiptera: aleyrodidae eggs and nymphs

    Directory of Open Access Journals (Sweden)

    Giuliana Etore do Valle

    2002-06-01

    Full Text Available Moscas brancas são pragas de diversas culturas, causam redução na produção e na qualidade do produto. Inseticidas, com diferentes modos de ação vêm sendo utilizados, sem muito sucesso. Neste trabalho avaliou-se a eficiência de inseticidas sobre ovos de diferentes idades (1, 3 e 5 dias e de ninfas de 1° ínstar da mosca branca Bemisia tabaci biótipo B. Os experimentos foram realizados em condições de laboratório, sob temperatura de 25 ± 2°C e fotofase de 12 horas. Piriproxifem (75 mg L-1 atuou como excelente ovicida, sendo altamente eficiente, 3 dias de idade. Cartape (500 mg L-1 não teve efeito satisfatório, mas a 1000 mg L-1 foi eficiente em ovos com até 5 dias de idade. Quanto à ação sobre ninfas de 1° ínstar, para pulverizações na face superior das folhas, piriproxifem, a 75 mg L-1, apresentou eficiência na supressão da emergência de adultos, caracterizando presença de ação translaminar; buprofezim, cartape, acefato e fempiroximate não apresentaram eficiência no controle de ninfas. Quando aplicado na face inferior das folhas, buprofezim (375 mg L-1 apresentou eficiência comparável à de piriproxifem, impedindo a emergência de adultos.Whiteflies are pests of many crops, cause severe yield losses and reduce crop quality. Insecticides of different modes of action have been used without success. In this work, the efficiency of five insecticides on Bemisia tabaci B biotype (= B. argentifolii eggs and nymphs was evaluated under laboratory conditions (T = 25 ± 2°C; 12 h photophase. In relation to the ovicidal effect, pyriproxyfen (75 mg L-1 caused egg hatching inhibition up to three day old eggs. Cartap showed efficiency only at the concentration of 1000 mg L-1, supressing the viability of eggs up to five days. Soybean leaves with first instar nymphs were treated in the upper surface with pyriproxyfen (75 mg L-1, buprofezin (375 mg L-1, cartap (1000 mg L-1, acephate (750 mg L-1 and fenpyroximate (100 mg L-1; in

  2. Isolated patellofemoral osteoarthritis.

    NARCIS (Netherlands)

    Jonbergen, H.P. van; Poolman, R.W.; Kampen, A. van

    2010-01-01

    BACKGROUND AND PURPOSE: The optimal treatment for isolated patellofemoral osteoarthritis is unclear at present. We systematically reviewed the highest level of available evidence on the nonoperative and operative treatment of isolated patellofemoral osteoarthritis to develop an evidenced-based discu

  3. 农药胁迫对2种体色型麦长管蚜生长发育和繁殖的影响%Effect of pesticide stress on the development and reproduction of different body-color biotypes of Sitobion avenae (Fab.)

    Institute of Scientific and Technical Information of China (English)

    亢菊侠; 惠凯凯; 胡祖庆

    2011-01-01

    【Objective】 Effects of pesticide stress on different body-color biotypes of colors of aphids were studied to provide theoretical basis for genetic inheritance and evolution.【Method】 Under strict controlled conditions in artificial bioclimatic chamber,new-born nymph of red and green biotypes of Sitobion avenae were placed on wheat treated under pesticide stress.Their impacts on biological characteristics of aphids(development duration(T),weight difference,mean relative growth rate(MRGR),mean generation time,net reproduction rate and intrinsic rate of increase) were subsequently measured.【Result】 The results illustrated that under pesticide stress,as the dose of omethoate and imidacloprid increased,the two body-color biotype of wheat aphid developmental duration and the mean generation time were increased,but the weight differences,the relative growth rate of average daily body weight,net reproductive rate and intrinsic growth rate were reduced.【Conclusion】 Under pesticide stress,the two body-color biotypes reproduction of aphid was reduced,and the green biotype was more sensitive than the red one.%【目的】研究农药胁迫对不同体色型麦长管蚜生长发育和繁殖的影响,为蚜虫生态遗传与进化提供理论依据。【方法】在不同剂量氧化乐果、吡虫啉农药胁迫下,于人工气候箱中饲养2种不同体色型(红色型和绿色型)麦长管蚜(Sitobion avenae Fab.)初生若蚜,分别测定各处理麦长管蚜的发育历期、体质量差、相对日均体质量增长率、种群平均世代周期、净增殖率及内禀增长率等生长发育和繁殖生物学参数。【结果】随着氧化乐果和吡虫啉施用剂量的增加,2种体色型麦长管蚜的发育历期、种群平均世代周期均增加,且绿色型麦长管蚜增加幅度比

  4. Major Shift of Toxigenic V. cholerae O1 from Ogawa to Inaba Serotype Isolated from Clinical and Environmental Samples in Haiti

    Science.gov (United States)

    Alam, Meer T.; Ray, Shrestha S.; Chun, Camille N.; Chowdhury, Zahara G.; Rashid, Mohammed H.; Madsen Beau De Rochars, Valery E.; Ali, Afsar

    2016-01-01

    In October of 2010, an outbreak of cholera was confirmed in Haiti for the first time in more than a century. A single clone of toxigenic Vibrio cholerae O1 biotype El Tor serotype Ogawa strain was implicated as the cause. Five years after the onset of cholera, in October, 2015, we have discovered a major switch (ranging from 7 to 100%) from Ogawa serotype to Inaba serotype. Furthermore, using wbeT gene sequencing and comparative sequence analysis, we now demonstrate that, among 2013 and 2015 Inaba isolates, the wbeT gene, responsible for switching Ogawa to Inaba serotype, sustained a unique nucleotide mutation not found in isolates obtained from Haiti in 2012. Moreover, we show that, environmental Inaba isolates collected in 2015 have the identical mutations found in the 2015 clinical isolates. Our data indicate that toxigenic V. cholerae O1 serotype Ogawa can rapidly change its serotype to Inaba, and has the potential to cause disease in individuals who have acquired immunity against Ogawa serotype. Our findings highlight the importance of monitoring of toxigenic V. cholerae O1 and cholera in countries with established endemic disease. PMID:27716803

  5. Main: PYRIMIDINEBOXOSRAMY1A [PLACE

    Lifescience Database Archive (English)

    Full Text Available PYRIMIDINEBOXOSRAMY1A S000259 19-August-2004 (last modified) kehi Pyrimidine box fo...und in rice (O.s.) alpha-amylase (RAmy1A) gene; Gibberellin-respons cis-element of GARE and pyrimidine box a...ically to this site; See S000265; alpha-amylase; sugar repression; GARE; pyrimidine box; feed-back metabolic

  6. Reference: PYRIMIDINEBOXOSRAMY1A [PLACE

    Lifescience Database Archive (English)

    Full Text Available PYRIMIDINEBOXOSRAMY1A Morita A, Umemura T, Kuroyanagi M, Futsuhara Y, Perata P, Yamaguchi J Functional disse...ction of a sugar-repressed alpha-amylase gene (Ramy1A) promoter in rice embryos FEBS Lett 423:81-85 (1998) PubMed: 9506846; ...

  7. Laboratory characterization of invasive Haemophilus influenzae isolates from Nunavut, Canada, 2000–2012

    Science.gov (United States)

    Tsang, Raymond S. W.; Li, Y. Anita; Mullen, Angie; Baikie, Maureen; Whyte, Kathleen; Shuel, Michelle; Tyrrell, Gregory; Rotondo, Jenny A. L.; Desai, Shalini; Spika, John

    2016-01-01

    Background With invasive Haemophilus influenzae serotype b (Hib) disease controlled by vaccination with conjugate Hib vaccines, there is concern that invasive disease due to non-serotype b strains may emerge. Objective This study characterized invasive H. influenzae (Hi) isolates from Nunavut, Canada, in the post-Hib vaccine era. Methods Invasive H. influenzae isolates were identified by conventional methods at local hospitals; and further characterized at the provincial and federal public health laboratories, including detection of serotype antigens and genes, multi-locus sequence typing and antibiotic susceptibility. Results Of the 89 invasive H. influenzae cases identified from 2000 to 2012, 71 case isolates were available for study. There were 43 serotype a (Hia), 12 Hib, 2 Hic, 1 Hid, 1 Hie, 2 Hif and 10 were non-typeable (NT). All 43 Hia were biotype II, sequence type (ST)-23. Three related STs were found among the Hib isolates: ST-95 (n=9), ST-635 (n=2) and ST-44 (n=1). Both Hif belonged to ST-124 and the 2 Hic were typed as ST-9. The remaining Hid (ST-1288) and Hie (ST-18) belonged to 2 separate clones. Of the 10 NT strains, 3 were typed as ST-23 and the remaining 7 isolates each belonged to a unique ST. Eight Hib and 1 NT-Hi were found to be resistant to ampicillin due to β-lactamase production. No resistance to other antibiotics was detected. Conclusion During the period of 2000–2012, Hia was the predominant serotype causing invasive disease in Nunavut. This presents a public health concern due to an emerging clone of Hia as a cause of invasive H. influenzae disease and the lack of published guidelines for the prophylaxis of contacts. The clonal nature of Hia could be the result of spread within an isolated population, and/or unique characteristics of this strain to cause invasive disease. Further study of Hia in other populations may provide important information on this emerging pathogen. No antibiotic resistance was detected among Hia isolates; a

  8. Oviposition behavior of the silver leaf whitefly Bemisia tabaci biotype B on tomato; Comportamento de oviposicao da mosca-branca Bemisia tabaci (Genn.) (Hemiptera: Aleyrodidae) biotipo B em tomateiro

    Energy Technology Data Exchange (ETDEWEB)

    Vendramim, Jose D. [Universidade de Sao Paulo (USP), Piracicaba, SP (Brazil). Escola Superior de Agricultura Luiz de Queiroz (ESALQ). Dept. de Entomologia, Fitopatologia e Zoologia Agricola]. E-mail: jdvendra@esalq.usp.br; Souza, Antonio P. de [Universidade Federal de Mato Grosso do Sul (UFMS), Campo Grande, MS (Brazil). Dept. de Morfofisiologia. Lab. de Anatomia Humana]. E-mail: apsouza@nin.ufms.br; Ongarelli, Maria das G. [Universidade de Sao Paulo (USP), Piracicaba, SP (Brazil). Escola Superior de Agricultura Luiz de Queiroz (ESALQ). Lab. de Fisiologia e Bioquimica Pos-Colheita]. E-mail: mgong@esalq.usp.br

    2009-01-15

    The objective of this work was to evaluate the influence of the leaf surface, the insect geotropic behavior and the type of foliar trichome on Bemisia tabaci (Genn.) biotype B oviposition on tomato leaves. Bemisia tabaci females were confined in acrylic boxes in which tomato leaflets were fixed at the bottom and top part of the boxes to allow insects to access the leaf surface to be tested (adaxial and/or abaxial) in both no-choice and free choice tests. Oviposition was always higher when the leaf was offered at the top of the box and preferably at the abaxial leaf surface. The effects of leaf trichomes (glandular and non glandular) on B. tabaci oviposition was evaluated by offering the abaxial surface of tomato leaflets to females after a 70% ethanol wash to remove glandular exsudates against a control treatment (without a ethanol wash). Oviposition was concentrated mostly near to non glandular trichomes, showing whitefly females can discriminate among the trichomes. (author)

  9. Infestação de Bemisia tabaci biótipo B e Caliothrips phaseoli em genótipos de feijoeiro Infestation of Bemisia tabaci biotype B and Caliothrips phaseoli on bean genotypes

    Directory of Open Access Journals (Sweden)

    Flávio Gonçalves de Jesus

    2010-01-01

    Full Text Available Avaliou-se o comportamento de genótipos de feijoeiro sob a infestação de Bemisia tabaci (Genn. biótipo B e Caliothrips phaseoli (Hood em condições de campo, nas épocas de cultivo "de inverno", "das águas" e "da seca". Adotou-se o delineamento de blocos casualizados em esquema de parcelas sub-subdividida (19x3x6, com 19 genótipos (IAC Tybatã, IAC Una, FT Nobre, Pérola, Gen 96A98-15-3-32-1, Gen 96A45-3-51-52-1, IAC Alvorada, IAC Diplomata, Gen 96A3-P1-1-1, LP 98-122, LP 02-130, LP 01-38, LP 9979, BRS-Pontal, BRS-Requinte, BRS-Triunfo, BRS-Grafite, CV-48 e Z-28, três épocas de cultivos (inverno, águas e seca e seis períodos de avaliação. As avaliações foram realizadas semanalmente, contando-se o número de ovos e ninfas de B. tabaci e ninfas de C. phaseoli em dez folíolos por parcela. Os genótipos IAC Una, Pérola, Gen 96A45-3-51-52-1, Gen 96A98-15-32-1, FT Nobre, IAC Tybatã, IAC Alvorada, LP 02-130, LP 01-38, LP 98-122, IAC Diplomata e Gen 96A3P1-1-1 foram menos ovipositados por B. tabaci no cultivo "das águas". Os genótipos Pérola, Gen 96A45-3-51-52-1, IAC Una, Gen 96A98-15-32-1, IAC Tybatã e FT Nobre foram menos infestados por C. phaseoli. A maior incidência de ninfas de mosca-branca ocorreu no fim de janeiro no cultivo "das águas" e início de maio no cultivo "da seca"; para tripés, foi em junho durante o cultivo "de inverno". A maior incidência da população de B. tabaci e C. phaseoli, ocorreu dos 46 aos 60 dias após a emergência das plantas.The response of bean genotypes to infestation of Bemisia tabaci (Genn. biotype B and Caliothrips phaseoli (Hood in field conditions on the winter, rainy and dry seasons was evaluated. The experiment was arranged in a randomized Sub-divided (19x3x6 blocks design with 19 genotypes (IAC Tybatã, IAC Una, FT Nobre, Pérola, Gen 96A98-15-3-32-1, Gen 96A45-3-51-52-1, IAC Alvorada, IAC Diplomata, Gen 96A3-P1-1-1, LP 98-122, LP 02-130, LP 01-38, LP 9979, BRS-Pontal, BRS

  10. Factors affecting oviposition of Bemisia tabaci (Genn.) biotype B (Hemiptera: Aleyrodidae) in sweet pepper; Fatores que afetam a oviposicao de Bemisia tabaci (Genn.) biotipo B (Hemiptera: Aleyrodidae) em pimentao

    Energy Technology Data Exchange (ETDEWEB)

    Lima, Larissa C. de; Campos, Alcebiades R. [UNESP, Ilha Solteira, SP (Brazil). Dept. de Fitossanidade, Engenharia Rural e Solos]. E-mail: lclima@aluno.feis.unesp.br; campos@bio.feis.unesp.br

    2008-03-15

    Bemisia tabaci (Gen.) biotype B is considered a pest of economical importance for several vegetables. The oviposition behaviour of the while fly was evaluated in sweet pepper plants. The trials were carried out under greenhouse condition and in the Laboratory of Entomology of DEFERS/ UNESP, Campus of Ilha Solteira-SP, with the sweet pepper Magali-R genotype. The effect of plant age on the whitefly oviposition was evaluated in free-choice tests, in plants, 25, 30, 35, 40 and 45- day-old, as egg distribution in the plant and on the leaf blade was evaluated in 35-days-old plants. In a no-choice tests, 35-day-old plants were used to evaluate the effect of the densities of 50, 100, 150, 200 and 250 adults per plant on the number of eggs laid by insects. The silver leaf whitefly preferred to oviposition the third to sixth leaflets, of the medium and superior part of plants of sweet pepper; the leaf blade areas, located in the lobes right and left close the base of the leaf were the preferential site for whitefly oviposition. Older plants, 40- and 45-day-old, were preferentially used for oviposition, and 200 and 250 adults per plant were both enough to lay a number of eggs that allowed to differentiate among sweet pepper genotypes with different whitefly resistance levels. (author)

  11. 免疫磁珠分选白血病KG1a细胞中CD34+CD38-干细胞及其特性研究%Isolation and characteristic of CD34 + CD38-stem cells in leukemia cell line KG1a using magnetic activated cell sorting

    Institute of Scientific and Technical Information of China (English)

    王国征; 李慧; 吴远彬; 李达; 贺艳杰; 周雪云

    2013-01-01

    目的 从白血病KGla细胞中分选CD34+ CD38-干细胞并研究其生物学特性.方法 免疫磁珠法分选CD34+ CD38-细胞,流式细胞术分析细胞表面膜抗原、细胞周期,甲基纤维素培养体系观察其克隆性;以HL60、K562、CD34+ CD38+细胞为对照,甲基偶氮唑蓝法检测柔红霉素对CD34+ CD38-细胞的抑制作用;BALB/c裸鼠皮下接种,观察体内成瘤能力.结果 分选的CD34+ CD38-细胞纯度达95%以上,(69.03 +3.25)%处于Go期,克隆形成率为(38.64±2.68)%,明显抵抗柔红霉素;不同浓度柔红霉素作用后,CD34+ CD38-、CD34+ CD38+、HL60、K562细胞的活性差异有统计学意义(F =961.136,P=0.000);CD34+ CD38-在裸鼠皮下成瘤率显著高于CD34+ CD38+细胞(P<0.05).结论 免疫磁珠法分选白血病干细胞简单易行,分选的细胞符合白血病干细胞生物学特性.%Objective To isolate the CD34+ CD38- stem cells from human acute leukemia cell line KGla and to research its biological characteristics. Methods CD34+ CD38- cells were isolated by magnetic activated cell sorting( MACS) ; the cell surface membrane antigens and cell cycle were analyzed by flow cytometry; its clonality was observed with methyl cellulose system. HL60,K562 and D34+ CD38+ cells were selected as control,and the methyl thiazolyl tetrazolium(MTT) assay was taken to observe the depressant effect of rubidomycin to CD34+ CD38- cells. BALB/c nude mice were inoculated subcutaneous-ly to observe the tumorigenicity. Results The purity of CD34+ CD38- cells were above 95% and(69.03 ± 3. 25) % cells in the G0 phase. The cloning efficiency of CD34+ CD38- cells were( 38. 64 ± 2. 68) % , and the CD34+ CD38- cells were obviously resistant to rubidomycin. There were statistic difference of cytoactive among CD34+ CD38-, CD34+ CD38 + , HL60, and K562 cells under giving the same concentrations of rubidomycin circumstances (F = 961. 136,P= 0.000). The tumorigenesis ability of CD34+ CD38- cells in nude mice was

  12. Main: WBOXGACAD1A [PLACE

    Lifescience Database Archive (English)

    Full Text Available WBOXGACAD1A S000448 19-August-2004 (last modified) kehi W-box found in the promoter region of the CAD...GAC), S000142 (TTGACC); W-box; TGAC; CAD; WRKY; Gossypium arboreum (cotton) AGTCAAAATTGACC ...

  13. Yersinia enterocolitica strains associated with human infections in Switzerland 2001-2010.

    Science.gov (United States)

    Fredriksson-Ahomaa, M; Cernela, N; Hächler, H; Stephan, R

    2012-07-01

    Yersinia enterocolitica infections are common in humans. However, very scarce data are available on the different biotypes and virulence factors of human strains, which has proved to be problematic to assess the clinical significance of the isolated strains. In this study, the presence of the ail gene and distribution of different bio- and serotypes among human Y. enterocolitica strains and their possible relation to the genotype and antimicrobial resistance were studied. In total, 128 Y. enterocolitica strains isolated from human clinical samples in Switzerland during 2001-2010 were characterised. Most (75 out of 128) of the Y. enterocolitica strains belonged to biotypes 2, 3 or 4 and carried the ail gene. One of the 51 strains that belonged to biotype 1A was also ail positive. Most of the ail-positive strains belonged to bioserotype 4/O:3 (47 out of 76) followed by 2/O:9 (22 out of 76). Strains of bioserotype 4/O:3 were dominant among patients between 20 and 40 years old and strains of biotype 1A dominate in patients over 40 years. Strains belonging to biotypes 2, 3 and 4, which all carried the ail gene, exhibited a high homogeneity with PFGE typing. Y. enterocolitica 2/O:5,27 and 2/O:9 strains showed resistance to amoxicillin/clavulanic acid and cefoxitin, but Y. enterocolitica 4/O:3 strains did not.

  14. Mutation and premating isolation.

    Science.gov (United States)

    Woodruff, R C; Thompson, J N

    2002-11-01

    While premating isolation might be traceable to different genetic mechanisms in different species, evidence supports the idea that as few as one or two genes may often be sufficient to initiate isolation. Thus, new mutation can theoretically play a key role in the process. But it has long been thought that a new isolation mutation would fail, because there would be no other individuals for the isolation-mutation-carrier to mate with. We now realize that premeiotic mutations are very common and will yield a cluster of progeny carrying the same new mutant allele. In this paper, we discuss the evidence for genetically simple premating isolation barriers and the role that clusters of an isolation mutation may play in initiating allopatric, and even sympatric, species divisions.

  15. Isolated Galaxies and Isolated Satellite Systems

    CERN Document Server

    Ann, H B; Choi, Yun-Young

    2009-01-01

    We search for isolated galaxies using a volume-limited sample of galaxies with 0.02r_{vir,nei} and \\rho <\\bar{\\rho} well segregates the CIG galaxies. We confirm the morphology conformity between the host and their satellites, which suggests importance of hydrodynamic interaction among galaxies within their virial radii in galaxy evolution.

  16. Suscetibilidade comparativa a herbicidas pós-emergentes de biótipos de Digitaria ciliaris resistente e suscetível aos inibidores da ACCase Relative susceptibility to post-emergence herbicides of ACCase-resistant and susceptible biotypes of Digitaria ciliaris

    Directory of Open Access Journals (Sweden)

    R.F. López-Ovejero

    2006-12-01

    Full Text Available Esta pesquisa foi conduzida com o objetivo de avaliar a possibilidade de resistência múltipla aos herbicidas inibidores da ACCase, ALS e síntese de carotenos em um biótipo de capim-colchão (Digitaria ciliaris resistente aos inibidores da ACCase. O experimento foi conduzido em casa de vegetação, utilizando dois biótipos de capim-colchão: um resistente (R e outro suscetível (S aos herbicidas inibidores da ACCase. O delineamento experimental utilizado foi o de blocos ao acaso, com quatro repetições. Foram utilizados 11 herbicidas: fluazifop-p-butil, haloxyfop-r-methyl, propaquizafop, sethoxydim, tepraloxydim, clethodim, fenoxaprop + clethodim, imazethapyr, nicosulfuron, iodosulfuron + foramsulfuron e mesotrione. Para cada herbicida, os tratamentos resultaram da combinação fatorial entre os dois biótipos de capim-colchão e 10 doses (0,0D; 0,016D; 0,03D; 0,06D; 0,25D; 0,5D; 1,0D; 2,0D; 4,0D; e 16,0D, em que D é a dose recomendada para cada produto. Os herbicidas foram aplicados sobre as plantas de capim-colchão em estádio de desenvolvimento de 3-4 folhas. Avaliou-se a porcentagem de controle aos 28 dias após a aplicação (DAA. O biótipo R foi confirmado como resistente aos herbicidas inibidores da ACCase (grupos químicos dos ariloxifenoxipropionatos e cicloexanodionas com níveis variáveis de resistência cruzada. O biótipo R foi controlado satisfatoriamente pela dose de campo de todos os herbicidas alternativos aplicados (sulfoniluréias, imidazolinonas e inibidores da síntese de caroteno, excluindo a hipótese de resistência múltipla nesse biótipo de capim-colchão.This research was conducted to evaluate the possibility of multiple resistances to ACCase, ALS and carotene synthesis inhibiting herbicides in one ACCase-resistant biotype of crab-grass (Digitaria ciliaris. The experiment was conducted in a greenhouse, using two crab-grass biotypes: one resistant (R and another susceptible (S to ACCase inhibiting herbicides

  17. Biology, management and biochemical/genetic characterization of weed biotypes resistant to acetolactate synthase inhibitor herbicides Biologia, manejo e caracterização bioquímica e genética de biótipos resistentes aos herbicidas inibidores da acetolactato sintase

    Directory of Open Access Journals (Sweden)

    Patrícia Andrea Monquero

    2003-01-01

    Full Text Available Bidens pilosa and Amaranthus quitensis are major weeds infesting soybean [Glycine max L (Merrill] fields in Brazil and Argentina. The repetitive use of acetolactate synthase (ALS EC 4.1.3.18 inhibiting herbicides in São Gabriel do Oeste, MS, Brazil and in the provinces of Córdoba and Tucumã, Argentina, has selected for resistant (R biotypes of these weeds. Research work was developed to study the management, growth, biochemistry, and genetics of these R weed biotypes. In a field experiment it was found that chlorimuron-ethyl and imazethapyr at recommended rates (both ALS inhibitor herbicides, did not control R B. pilosa, but the alternative lactofen, fomesafen and bentazon were effective, either sprayed alone or mixed with the ALS inhibitor herbicides. Greenhouse studies confirmed the cross-resistance of both R biotypes to the imidazolinone and sulfonylurea herbicides, and these alternative herbicides, when sprayed alone or mixed with the ALS inhibitor, efficiently controlled both R and S populations. A growth analysis of the R and S biotypes of these weeds, under non-competitive conditions, indicated that there is no adaptive cost to the R biotypes (pleiotropic effect. A quick bioassay using ALS and ketoacid reductoisomerase (KARI inhibitors showed that the resistance of the R biotypes to herbicides is related to a lack of sensitivity of the ALS enzyme to the herbicides. On the other hand, the sequencing of the gene that codifies the ALS resistance in R A. quitensis did not present any mutation in the A Domain region, suggesting that other positions of the gene that confer insensitivity of the ALS to sulfonylurea and imidazolinone herbicides could have mutated.Bidens pilosa e Amaranthus quitensis são as principais plantas daninhas infestantes na cultura de soja [Glycine max L (Merrill] no Brasil e Argentina, respectivamente. O uso repetitivo de herbicidas inibidores da acetolactato sintase (ALS EC 4.1.3.18 em São Gabriel do Oeste (MS

  18. Alternativ isolering i bygninger

    DEFF Research Database (Denmark)

    Andersen, T.; Skibstrup Eriksen, S.

    Denne SBI-meddelelse beskriver resultaterne af en undersøgelse af bygninger, hvor der er anvendt alternativ isolering. Undersøgelsen omfatter termografering og fugtmåling af udvendige bygningsdele isoleret med alternativ isolering. Endvidere rapporteres resultaterne af målinger af indholdet af tu...

  19. Efficiency of neem oil nanoformulations to Bemisia tabaci (GENN. Biotype B (Hemiptera: AleyrodidaeEficiência de nanoformulações a base de óleo de nim sobre Bemisia tabaci (GENN. Biótipo B (Hemiptera: Aleyrodidae

    Directory of Open Access Journals (Sweden)

    Sheila Salles Carvalho

    2012-04-01

    Full Text Available The nanotechnology, through encapsulation of active ingredients, has showed an important way to avoid problems with quickly degradation of the pesticide molecules. Thus, neem (Azadirachta indica oil nanoformulations containing ?-ciclodextrin and poli-?-caprolactone (PCL were tested as to their control efficiency against eggs and nymphs of Bemisia tabaci (Genn. biotype B reared in soybean. The Lethal Concentration (LC50 was estimated using a commercial neem oil (Organic Neem® on first-instar nymphs to establish the adequate volume of the nanoformulations per treatment. After that, they were sprayed on eggs and first-instar nymphs in laboratory and greenhouse and on third-instar nymphs in greenhouse. The commercial neem oil and distilled water were used as controls. Egg viability was not affected by any treatment. Among six nanoformulations, only one was efficient against the first-instar nymphs in laboratory conditions. However, its effective period was not increased as expected. In greenhouse, first-instar nymphs were more affected by two nanoformulations which were significantly different of the commercial neem oil - the most effective one. No mortality differences among the formulations in the third-instar test were observed. The nanoformulations were less efficient to control the B. tabaci biotype B nymphs than the commercial neem oil. A nanotecnologia, através do encapsulamento de ingredientes ativos, tem-se revelado uma importante estratégia para evitar problemas com a rápida degradação de moléculas inseticidas. Assim, nanoformulações à base de óleo de nim (Azadirachta indica utilizando os polímeros ?-ciclodextrina e poli-?-caprolactona (PCL foram testadas quanto a sua eficiência de controle de ovos e ninfas de Bemisia tabaci (Genn. biótipo B mantidas em soja. Foi estimada a CL50 utilizando uma formulação comecial de óleo de nim (Organic Neem® sobre ninfas em 1º ínstar da qual se estipulou o volume das nanoformula

  20. Tomato yellow vein streak virus: relationship with Bemisia tabaci biotype B and host range Tomato yellow vein streak virus: interação com a Bemisia tabaci biótipo B e gama de hospedeiros

    Directory of Open Access Journals (Sweden)

    Ana Carolina Firmino

    2009-12-01

    Full Text Available The Tomato yellow vein streak virus (ToYVSV is a putative species of begomovirus, which was prevalent on tomato crops in São Paulo State, Brazil, until 2005. The objectives of this study were to evaluate the interaction between ToYVSV and its vector Bemisia tabaci biotype B and to identify alternative hosts for the virus. The minimum acquisition and inoculation access periods of ToYVSV by B. tabaci were 30 min and 10 min, respectively. Seventy five percent of tomato-test plants were infected when the acquisition and inoculation access periods were 24 h. The latent period of the virus in the insect was 16 h. The ToYVSV was retained by B. tabaci until 20 days after acquisition. First generation of adult whiteflies obtained from viruliferous females were virus free as shown by PCR analysis and did not transmit the virus to tomato plants. Out of 34 species of test-plants inoculated with ToYVSV only Capsicum annuum, Chenopodium amaranticolor, C. quinoa, Datura stramonium, Gomphrena globosa, Nicotiana clevelandii and N. tabacum cv. TNN were susceptible to infection. B. tabaci biotype B was able to acquire the virus from all these susceptible species, transmitting it to tomato plants.O Tomato yellow vein streak virus (ToYVSV é uma espécie putativa de begomovirus que infecta o tomateiro (Solanum lycopersicon em diversas regiões do Brasil onde se cultiva essa solanácea, sendo a espécie prevalente no estado de São Paulo até 2005. Estudou-se a interação do ToYVSV com a Bemisia tabaci biótipo B e identificaram-se hospedeiras alternativas deste vírus. Os períodos de acesso mínimo de aquisição (PAA e de inoculação (PAI foram de 30 min e 10 min, respectivamente. A porcentagem de plantas infectadas chegou até cerca de 75% após um PAA e PAI de 24 h. O período de latência do vírus no vetor foi de 16 horas. O ToYVSV foi retido pela B. tabaci até 20 dias após a aquisição do vírus. Não foi detectada transmissão do vírus para prog

  1. Herança da resistência aos herbicidas inibidores da ALS em biótipos da planta daninha Euphorbia heterophylla Inheritance of ALS inhibitor resistance in Euphorbia heterophylla weed biotypes

    Directory of Open Access Journals (Sweden)

    L. Vargas

    2001-12-01

    Full Text Available Os herbicidas inibidores da ALS são os principais produtos aplicados para o controle da planta daninha amendoim-bravo (Euphorbia herterophylla em lavouras de soja; no entanto, já foram identificados biótipos desta planta daninha resistentes a estes herbicidas no Brasil. O objetivo desta pesquisa foi estudar a herança, o número de genes que conferem a resistência e o grau de resistência dos biótipos homozigotos e heterozigotos resistentes. Foram realizados cruzamentos recíprocos entre os genitores suscetíveis e resistentes para obtenção de sementes F1 e, posteriormente, realizaram-se os retrocruzamentos (RC com os genitores resistente (R e suscetível (S. Plantas F1 foram autofecundadas artificialmente para obtenção da geração F2. As plantas F1, F2, RCr e RCs e dos genitores foram tratadas com o herbicida imazethapyr (150 g ha-1. Para avaliar o grau de resistência, plantas F1 e os genitores resistente e suscetível foram tratados com as doses de imazethapyr de 0, 100, 200, 400, 800 e 1.600 g ha-1. As plantas F1 mostraram-se totalmente resistentes ao herbicida, demonstrando que a resistência é nuclear e dominante. As plantas F2 apresentaram alta probabilidade para segregação 3:1, indicando que a resistência é codificada por um gene dominante. A aplicação de doses de imazethapyr sobre as plantas F1 demonstrou que os biótipos homozigotos resistentes e os heterozigotos apresentam o mesmo grau de resistência para doses de até 1.600 g ha-1 deste herbicida. A resistência é codificada por um gene dominante nuclear com dominância completa.The ALS inhibitor herbicides are the main products applied to control Euphorbia heterophylla in the soybean crop; however, resistant biotypes to these herbicides have been identified in Brazil. This research aimed to study the inheritance, number of genes involved in the resistance and the degree of resistance of the homozygous and heterozygous resistant biotypes. Reciprocal crossings (RSs

  2. Effects of calcium fertilizer on the development, survival, and feeding of B-biotype Bemisia tabaci on Euphorbia pulcherrima%钙肥对B型烟粉虱发育、存活及取食为害的影响

    Institute of Scientific and Technical Information of China (English)

    黄俊; 张娟; 郁永明; 刘建新; 李明江; 朱开元

    2012-01-01

    This paper studied the development, survival, and feeding of B-biotype Bemisia tabaci on Euphorbia pulcherrima under the conditions of 26±1 ℃ and 60% -80% relative humidity after applying calcium fertilizer, taking applying fresh water as the control. There existed significant differences in the developmental duration of B. tabaci between treatment applying calcium fertilizer and the control. After applying calcium fertilizer, the egg stage of B. tabaci shortened significantly, and the development from egg to adult took 20. 18 days (for the control, it took 18.72 days). However , there were no significant differences in the survival rates of B. tabaci at different development stages between the two treatments. The feeding of B. tabaci on E. pulcherrima induced the plant leaf chlorophyll fluorescence parameters changed, i. e. , the photochemical efficiency (Fv/Fm ) , photochemical quenching coefficient (qp) , light use efficiency (α) , maximum photosynthesis rate (rETRmax ) , and tolerance to light (Ik) decreased significantly, while the non-photochemical quenching coefficient (NPQ) had a significant increase. After applying calcium fertilizer, the plant leaf photoinhibition parameter (β) , rETRmax,and Ik had less difference with the control. The nail polish blot observation on the lower epidermis structure of plant leaf showed that calcium fertilizer could effectively compensate the decrease in the photosynthesis of E. pulcherrima damaged by B-biotype B. tabaci.%以清水为对照,研究了施用钙肥后一品红植株对B型烟粉虱发育、存活和取食为害的影响.结果表明:在温度(26±1)℃、相对湿度60%~80%条件下,钙肥处理的一品红植株上的B型烟粉虱在发育历期上与对照存在显著差异,卵期明显缩短,各龄若虫期延长,从卵到成虫的发育时间为20.18 d,而对照为18.72 d;但钙肥处理对B型烟粉虱各虫态的存活率无显著影响.B型烟粉虱的取食为害诱导了一品红叶片叶

  3. Interaction between resistant tomato genotypes and plant extracts on Bemisia tabaci (Genn. biotype B Interação de genótipos resistentes de tomateiro e extratos vegetais sobre Bemisia tabaci (Genn. biótipo B

    Directory of Open Access Journals (Sweden)

    Edson Luiz Lopes Baldin

    2007-10-01

    Full Text Available The tomato (Lycopersicon spp. productivity is severely reduced by attack of several insects and microorganisms. It is economically one of the most important crops that has been extensively cultivated in the Americas. Therefore, assays were performed in the greenhouse and the laboratory to evaluate the possible interaction between resistant tomato genotypes and plant extracts on the control of the pest Bemisia tabaci Gennadius (Hemiptera: Aleyrodidae biotype B. This evaluation was performed for genotypes IAC-Santa Clara, PI-134417, LA-716, PI-134418, and PI-127826, and aqueous extracts from seeds of Azadirachta indica A. de Jussieu (Rutales: Meliaceae, branches and leaves of Trichilia pallida Swartz (Rutales: Meliaceae. In the greenhouse, spraying with extracts from seeds of A. indica, and leaves and branches of T. pallida reduced whitefly attraction with IAC-Santa Clara; on PI-134417, LA-716, PI-134418, and PI-127826 the extracts did not affect the attractiveness to the B. tabaci biotype B. Extracts from A. indica seeds and T. pallida leaves and branches reduced oviposition on IAC-Santa Clara; extracts from T. pallida branches reduced oviposition on PI-134417, PI-134418, and PI-127826, while the extract from A. indica seeds reduced oviposition in PI-127826. The extracts did not affect oviposition on LA-716. In the laboratory, the extracts increased the mortality of nymphs on the genotypes. The "genotype × extract" interaction was significant, indicating an addictive effect between resistant genotypes and plant extracts on whitefly control.O tomate (Lycopersicon spp. é uma das hortaliças mais importantes do mundo em termos econômicos e tem sido extensivamente cultivado nas Américas há séculos. Entretanto, a produtividade poderia ser mais alta se ela não fosse suscetível a ataques de insetos e microorganismos. Foram realizados ensaios em casa-de-vegetação e laboratório visando avaliar a possível interação de genótipos de tomateiro

  4. Oviposição e dispersão de ninfas de Bemisia tabaci biótipo B em genótipos de tomateiro Oviposition and nymphal dispersion of Bemisia tabaci biotype B on tomato genotypes

    Directory of Open Access Journals (Sweden)

    Marilene Fancelli

    2008-12-01

    Full Text Available Diversos métodos têm sido empregados para avaliar a resistência de plantas a moscas-brancas. Todavia, poucos trabalhos têm sido realizados visando determinar a dispersão de ninfas desses insetos sobre as plantas. O objetivo do presente trabalho foi avaliar a oviposição de B. tabaci biótipo B e a dispersão de suas ninfas em folíolos com e sem exsudatos de genótipos de tomateiro. Foram utilizados sete genótipos de tomateiro: LA716, LA1739, PI134417, LA462, LA1584, 'Santa Clara' e P25 (controle suscetível. A oviposição de B. tabaci biótipo B foi avaliada em gaiolas plásticas (2,8 cm² fixadas na face abaxial dos folíolos, nas quais foram inseridos dez casais do inseto. Para avaliação da dispersão das ninfas, considerou-se o deslocamento dos insetos além do limite da área ocupada pelas gaiolas. As variáveis observadas foram: mortalidade de adultos 24 horas após a liberação, número de ovos, viabilidade da fase de ovo, período de incubação, número de ninfas e dispersão. Em folíolos com exsudato, LA716, LA1739 e PI134417 provocaram as maiores mortalidades. Adultos mortos nos folíolos desses genótipos ficaram aderidos aos tricomas glandulares, o que provocou redução na oviposição do inseto. Para dispersão, nos folíolos com exsudato, os máximos valores ocorreram nos genótipos LA716, LA462 e P25. Na condição sem exsudato, LA716 promoveu a menor dispersão das ninfas. A presença do exsudato influencia negativamente a sobrevivência e oviposição do inseto. A dispersão das ninfas também é afetada pelo exsudato, embora outros fatores possam ser importantes para o deslocamento do inseto.Several methods have been employed for evaluating plant resistance to whiteflies. Although, a few researches have been conducted aiming to determine the whitefly nymphal dispersion on crops. The objective of this work was to evaluate the oviposition of B. tabaci biotype B and nymphal dispersion in leaflets with and without

  5. Biology of Bemisia tabaci (Genn. B biotype (Hemiptera, Aleyrodidae on tomato genotypes Biologia de Bemisia tabaci (Genn. Biótipo B (Hemiptera, Aleyrodidae em genótipos de tomateiro

    Directory of Open Access Journals (Sweden)

    Maria Auxiliadora de Godoy Oriani

    2011-02-01

    Full Text Available Brazil is one of the main tomato (Solanum lycopersicum producers worldwide. Nevertheless, considerable part of the production is lost due to Bemisia tabaci (Genn. B biotype attacks. Resistant plants can be an important method for controlling this pest in an integrated pest management. Tests for evaluating some biological aspects of B. tabaci were carried out on 18 tomato genotypes, in controlled laboratory greenhouse conditions. Thirty-day-old plants placed in plastic cages were infested with 20 whitefly pairs each, for 24 h. The development of at least 30 eggs in three leaflets per plant (repetition was observed until adult emergence. The development period of insects grown in LA1335, PI365928 and LA722 genotypes took three days longer when compared to the ones grown in PI134418 (20.3 days. The highest mortality rate of whitefly nymphs occurred in PI365928, LA1335 and LA722 genotypes (63.8, 54.5 and 53.3%, respectively, and the smallest ones in IAC294 and IAC68F-22-2 genotypes (4.9 e 6.2%, respectively. LA1335, PI365928 and LA722 genotypes presented moderate feeding nonpreference and/or antibiosis-based resistance to B. tabaci B biotype.O Brasil é um dos maiores produtores mundiais de tomate (Solanum lycopersicum, porém grande parte da produção é perdida devido ao ataque de Bemisia tabaci (Genn. biótipo B. Entre as táticas de controle dessa praga num manejo integrado de pragas, pode-se relacionar a resistência de plantas. Ensaios para avaliar alguns aspectos biológicos de B. tabaci foram realizados com 18 genótipos de tomateiro, em condições controladas de laboratório (casa de vegetação. Plantas com 30 dias de idade foram colocadas em gaiolas plásticas e infestadas com 20 casais de moscas-brancas cada, durante 24h. Acompanhou-se então o desenvolvimento de pelo menos 30 ovos em três folíolos por planta (repetição até a emergência dos insetos. Os insetos criados nos genótipos LA1335, PI365928 e LA722 apresentaram

  6. Análise comparativa do crescimento de biótipos de picão-preto (Bidens pilosa resistente e suscetível aos herbicidas inibidores da ALS Growth analysis of Bidens pilosa biotypes resistant and susceptible to ALS inhibitor herbicides

    Directory of Open Access Journals (Sweden)

    P.J. Christoffoleti

    2001-04-01

    , TCA, TCR e TAL maiores que o suscetível. Dessa forma, concluiu-se que o biótipo de Bidens pilosa resistente aos herbicidas inibidores da ALS apresenta a mesma eficiência de produção de biomassa no final do ciclo. É provável que, quando em competição entre si e com as culturas, possua a mesma competitividade, sendo a dominância numérica de um biótipo sobre o outro decorrente apenas da pressão de seleção causada pelo herbicida.The resistance of weed biotypes to acetolactate synthase (ALS inhibitor herbicides is due to this enzyme's lack of sensitivity to ALS inhibitor herbicides, which inhibit its catalytic activity. ALS insensitivity results from a structural change in the aminoacid sequence, exactly in the site of action of these herbicides. Eventually this modification in the enzyme may result in a reduced plant growth rate. Such reduction was also observed in biotypes resistant to Photosystem II inhibitor herbicides. The possibility of a lower growth rate of the resistant plant may directly affect biotype competitiveness, its population dynamics and, as a consequence, resistance management strategies. The objective of this research was to compare the growth rates of both resistant and susceptible Bidens pilosa biotypes to ALS inhibitor herbicides. The experiment was conducted in a greenhouse, using one plant per pot of 5 L capacity. Four plants per biotype were harvested weekly, starting 14 days after planting, and the leaf area and dry biomass were measured. The Richards function fitted to the data enabled the derivation of absolute growth rate, relative growth rate and net assimilation rate. The susceptible biotype had a higher biomass accumulation during the early stages, with both biotypes having the same size, afterwards. The higher net assimilation rate of the resistant biotype during the early stages of growth was balanced by its lower size during the first four weeks of growth. It was concluded that both biotypes have the same size, being very

  7. Physical and transcriptional map in the CMT 1A region

    Energy Technology Data Exchange (ETDEWEB)

    Chevillard, C.; Passage, E.; Cudrey, C. [INSERM Marseille (France)] [and others

    1994-09-01

    The Charcot-Marie-Tooth disease type 1A (CMT1A) has been mapped to the proximal short arm of chromosome 17. CMT1A is the most frequent of the motor and sensory peripheral neuropathies and is associated with a duplication of a 1.5 Mb fragment in proximal 17p12. Several groups have proposed that the gene coding for peripheral myelin protein-22 (PMP-22) as the candidate gene for CMT1A. We have recently published a {open_quote}MegaYAC{close_quote} contig of 6 Mb which covers the CMT1A critical region. In order to isolate new genes localized in this region, we used a {open_quote}physical trapping {close_quote} strategy derived from the direct cDNA selection technique developed by Parimoo et al. This approach has allowed us to construct cDNA {open_quotes}minilibraries{close_quotes} using YAC DNA from the CMT1A region. One of the clones in these minilibraries has been mapped back to the CMT1A duplication. Other potentially interesting clones are in the process of further characterization. Furthermore, we have mapped several Genethon microsatellites in the 6 Mb YAC contig and some are located in the CMT1A duplicated region. These highly polymorphic markers should prove useful for diagnostic testing in CMT1A.

  8. Isolation, expression and construction of plant expression vector of PdLim1, a transcription factor involved in the lignin biosynthesis in Populua deltoides%美洲黑杨木质素生物合成转录因子PdLiml基因的克隆、表达及植物表达载体构建

    Institute of Scientific and Technical Information of China (English)

    王璐; 李百炼; 张金凤; 张德强

    2009-01-01

    在植物体内,Liml基因与木质素生物合成酶基因启动子区域富含AC的Pal盒结合,转录调控木质素的生物合成过程.该研究组合利用生物信息学和realtime PCR方法,首次从美洲黑杨形成层cDNA中分离出PdLimlcDNA全长,并进行了测序和序列分析.结果表明,克隆的美洲黑杨PdLimlcDNA片段总长为952 bp,基因内部含有完整的开放阅读框架,大小为594 bp,可编码长度为197个氨基酸残基的蛋白质,所推导的蛋白质氨基酸序列与拟南芥AtLiml和水稻OsLiml蛋白的同源性分别为82.1%和78.2%.组织特异性realtime PCR结果显示,PdLiml基因在场树根、茎、叶片和顶端分生组织中均有表达,但其表达模式却不同:PdLiml在成熟叶片和成熟木质部中表达丰度最高,在树皮、根部、韧皮部和形成层表达丰度较高,在未成熟木质部有少量表达,在顶端分生组织中表达丰度最低.在此基础上,以pBI121为表达载体,构建了在CaMV35S启动子驱动下,PdLiml基因的正义(pBI121-CaMV35S-sensePdLiml)和反义(pBI121-CaMV35S-antisense PdLiml)类型的双元植物表达载体.该研究为杨树PdLiml的基因工程改良木材纤维品质性状提供了重要的理论依据,具有潜在的应用价值.%In plants, the Liml gene regulates the lignin biosynthesis by binding the AC-rich motif, the Pal box, which is an important cis-acting element located in the promoter region of genes encoding enzymes in the lignin biosynthesis. A full-length cDNA clone encoding Liml was isolated from the cDNA prepared from the cambium zone of Populus deltoides by the approach of biological informatics and realtime PCR method. The cDNA was 952 bp in length with an open reading frame (ORF), which is capable of encoding a protein of 197 amino acids. The deduced protein sequence of the PdLiml shared 82.1% and 78.2% identity with those of Arabidopsis thaliana and Oryza sativa Liml,respectively. Realtime PCR results indicated that PdLiral was

  9. Base isolation: Fresh insight

    Energy Technology Data Exchange (ETDEWEB)

    Shustov, V.

    1993-07-15

    The objective of the research is a further development of the engineering concept of seismic isolation. Neglecting the transient stage of seismic loading results in a widespread misjudgement: The force of resistance associated with velocity is mostly conceived as a source of damping vibrations, though it is an active force at the same time, during an earthquake type excitation. For very pliant systems such as base isolated structures with relatively low bearing stiffness and with artificially added heavy damping mechanism, the so called `damping`` force may occur even the main pushing force at an earthquake. Thus, one of the two basic pillars of the common seismic isolation philosophy, namely, the doctrine of usefulness and necessity of a strong damping mechanism, is turning out to be a self-deception, sometimes even jeopardizing the safety of structures and discrediting the very idea of seismic isolation. There is a way out: breaking with damping dependancy.

  10. Alternativ isolering i bygninger

    DEFF Research Database (Denmark)

    Hansen, Ernst Jan de Place

    2001-01-01

    Resume af rapport om målinger på alternative isoleringsmaterialer i bygninger, udgivet af Statens Byggeforskningsinstitut (SBI meddelelse 128) under Energistyrelsens udviklingsprogram "Miljø- og arbejdsmiljøvenlig isolering"...

  11. Isolated patellofemoral osteoarthritis

    OpenAIRE

    Jonbergen, H.P. van; Poolman, R. W.; Kampen, A. van

    2010-01-01

    BACKGROUND AND PURPOSE: The optimal treatment for isolated patellofemoral osteoarthritis is unclear at present. We systematically reviewed the highest level of available evidence on the nonoperative and operative treatment of isolated patellofemoral osteoarthritis to develop an evidenced-based discussion of treatment options. METHODS: A systematic computerized database search (Cochrane Database of Systematic Reviews, Cochrane Central Register of Controlled Trials, MEDLINE (PubMed), and EMBASE...

  12. Isolated sleep paralysis

    OpenAIRE

    Sawant, Neena S.; Parkar, Shubhangi R.; Tambe, Ravindra

    2005-01-01

    Sleep paralysis (SP) is a cardinal symptom of narcolepsy. However, little is available in the literature about isolated sleep paralysis. This report discusses the case of a patient with isolated sleep paralysis who progressed from mild to severe SP over 8 years. He also restarted drinking alcohol to be able to fall asleep and allay his anxiety symptoms. The patient was taught relaxation techniques and he showed complete remission of the symptoms of SP on follow up after 8 months.

  13. Isolation of cellulose microfibrils - An enzymatic approach

    Directory of Open Access Journals (Sweden)

    Sain, M.

    2006-11-01

    Full Text Available Isolation methods and applications of cellulose microfibrils are expanding rapidly due to environmental benefits and specific strength properties, especially in bio-composite science. In this research, we have success-fully developed and explored a novel bio-pretreatment for wood fibre that can substantially improve the microfibril yield, in comparison to current techniques used to isolate cellulose microfibrils. Microfibrils currently are isolated in the laboratory through a combination of high shear refining and cryocrushing. A high energy requirement of these procedures is hampering momentum in the direction of microfibril isolation on a sufficiently large scale to suit potential applications. Any attempt to loosen up the microfibrils by either complete or partial destruction of the hydrogen bonds before the mechanical process would be a step forward in the quest for economical isolation of cellulose microfibrils. Bleached kraft pulp was treated with OS1, a fungus isolated from Dutch Elm trees infected with Dutch elm disease, under different treatment conditions. The percentage yield of cellulose microfibrils, based on their diameter, showed a significant shift towards a lower diameter range after the high shear refining, compared to the yield of cellulose microfibrils from untreated fibres. The overall yield of cellulose microfibrils from the treated fibres did not show any sizeable decrease.

  14. IDENTIFICATION AND ANTIBIOTIC RESISTANCE PROFILE OFENTEROBACTERIACEAE SPECIES AND LACTOBACILLUS SPP. ISOLATED FROM HONEY BEES (APIS MELLIFERA DIGESTIVE TRACT

    Directory of Open Access Journals (Sweden)

    Lukáš Hleba

    2014-02-01

    Full Text Available Honey bees play important role in agricultural environment as main pollinators. Its important for many agricultural and wild plants. Also honey bee are producers of honey, which is consumed directly and it should be not a heat treatment. Many bacteria can be survive in honey for long time. Some of these bacteria are human and animal facultative pathogens, including Enterobactericaeae genera. If these bacteria contain antibiotic resistant genes than it can to leads to troubles in healing of some of bacterial infections. Lactobacillus spp. can be a reservoir of resistant genes for pathogenic bacterial strains. In this study we isolated Enterobacteriaceae strains from digestive tracts of honey bees. These strains was tested to the eight selected antibiotics by disc diffusion method and strains were indentified by MALDI TOF MS Biotyper. From this study we determined resistance to piperacillin in the highest level. Equally, we determined that Citrobacter gillenii was resistant to three antibiotics (piperacillin, chloramphenicol and levofloxacin from eight. Resistance to other antibiotics were determined in low levels and other indentified bacteria were resistant to one antibiotic, if any. Also we detected resistance in Lactobacillus spp. and determined MICs distribution for some selected antibiotics. For absence of similar studies we could not to discuss our results and we think that further experiments and studies are needed.

  15. The roles of CC2D1A and HTR1A gene expressions in autism spectrum disorders.

    Science.gov (United States)

    Sener, Elif Funda; Cıkılı Uytun, Merve; Korkmaz Bayramov, Keziban; Zararsiz, Gokmen; Oztop, Didem Behice; Canatan, Halit; Ozkul, Yusuf

    2016-06-01

    Classical autism belongs to a group of heterogeneous disorders known as autism spectrum disorders (ASD). Autism is defined as a neurodevelopmental disorder, characterized by repetitive stereotypic behaviors or restricted interests, social withdrawal, and communication deficits. Numerous susceptibility genes and chromosomal abnormalities have been reported in association with autism but the etiology of this disorder is unknown in many cases. CC2D1A gene has been linked to mental retardation (MR) in a family with a large deletion before. Intellectual disability (ID) is a common feature of autistic cases. Therefore we aimed to investigate the expressions of CC2D1A and HTR1A genes with the diagnosis of autism in Turkey. Forty-four autistic patients (35 boys, 9 girls) and 27 controls were enrolled and obtained whole blood samples to isolate RNA samples from each participant. CC2D1A and HTR1A gene expressions were assessed by quantitative Real-Time PCR (qRT-PCR) in Genome and Stem Cell Center, Erciyes University. Both expressions of CC2D1A and HTR1A genes studied on ASD cases and controls were significantly different (p < 0.001). The expression of HTR1A was undetectable in the ASD samples. Comparison of ID and CC2D1A gene expression was also found statistically significant (p = 0.028). CC2D1A gene expression may be used as a candidate gene for ASD cases with ID. Further studies are needed to investigate the potential roles of these CC2D1A and HTR1A genes in their related pathways in ASD.

  16. Curvas de dose-resposta de biótipos resistente e suscetível de Bidens pilosa L. aos herbicidas inibidores da ALS Rate-response curves of resistant and susceptible Bidens pilosa L. biotypes to ALS-inhibitor herbicides

    Directory of Open Access Journals (Sweden)

    Pedro Jacob Christoffoleti

    2002-09-01

    phenomenon. In this regard, experiments aiming to build rate-response curves comparing a resistant (R and a susceptible (S biotype of the weed Bidens pilosa L., to ALS inhibitor herbicides, were set up. At the stage of three to four leaves, biotypes R and S of B. pilosa were sprayed with the herbicides chlorymuron-ethyl, metsulfuron-methyl, nicosulfuron and imazethapyr, at multiples of 0.0; 0.001, 0.01, 0.1; 1.0; 10; 100 and 1,000 of the recommended field rates. Results lead to the building of percentage control rate-response curves. The ratio between the C50 of the resistant biotype, divided by the C50 of the susceptible biotype, were 40.92; 173.84; 57.47 and 57.16 for the herbicides chlorymuron-ethyl, nicosulfuron, metsulfuron-methyl and imazethapyr, respectively. The R biotype of B. pilosa had a high degree of resistance in relation to all ALS inhibitor herbicides studied, being also cross resistant to imidazolinone and sulfonylurea.

  17. Alteração das características biológicas dos biótipos de azevém (Lolium multiflorum ocasionada pela resistência ao herbicida glyphosate Change in the biological characteristics of ryegrass (Lolium multiflorum biotypes caused by resistance to the herbicide glyphosate

    Directory of Open Access Journals (Sweden)

    L. Vargas

    2005-03-01

    Full Text Available A resistência de biótipos de azevém ao herbicida glyphosate está alterando o manejo da vegetação de cobertura do solo em pomares de maçã. O objetivo deste trabalho foi determinar a dose de glyphosate necessária para reduzir 50% do acúmulo de matéria seca (GR50, a resposta do biótipo resistente e sensível a herbicidas graminicidas e o acúmulo de matéria seca destes biótipos durante o ciclo. Para isso, foram conduzidos três experimentos. No primeiro, os tratamentos constaram de doses crescentes de glyphosate aplicadas sobre plantas dos biótipos resistente e sensível para determinar o GR50. No segundo experimento, os tratamentos constaram de doses dos herbicidas glyphosate, haloxyfop-r, diclofop, fluazifop-p, fenoxaprop-p e paraquat. No terceiro experimento, sementes dos biótipos resistente e sensível foram semeadas em recipientes com capacidade para 10 L e as plantas originadas delas foram colhidas quinzenalmente, para determinação da matéria seca da parte aérea, radicular e total. Como resultados, foi obtido GR50 de 287,5 e de 4.833,5 g e.a. ha-1 de glyphosate para os biótipos sensível e resistente, respectivamente, e verificou-se que existem diferenças significativas na resposta dos biótipos aos herbicidas graminicidas, dependendo da dose utilizada. Além disso, o biótipo sensível evidenciou maior capacidade de acúmulo de matéria seca e produção de sementes. Constatouse, assim, fator de resistência (FR de 16,8 e que o mecanismo de resistência provoca alterações nas características biológicas do biótipo resistente e afeta a sensibilidade deste aos herbicidas graminicidas.The identification of ryegrass biotypes resistant to glyphosate is causing changes in weed management in apple orchards. Three experiments were carried out to determine the GR50 of the biotypes, to grass herbicides and dry matter accumulation. The first experiment tested different rates of glyphosate. Their effects on GR50 dry matter

  18. Antimicrobial Efficacy of a Lactic Acid and Citric Acid Blend against Shiga Toxin-Producing Escherichia coli, Salmonella, and Nonpathogenic Escherichia coli Biotype I on Inoculated Prerigor Beef Carcass Surface Tissue.

    Science.gov (United States)

    Scott, Brittney R; Yang, Xiang; Geornaras, Ifigenia; Delmore, Robert J; Woerner, Dale R; Adler, Jeremy M; Belk, Keith E

    2015-12-01

    Studies were conducted to (i) determine whether inoculants of nonpathogenic Escherichia coli biotype I effectively served as surrogates for E. coli O157:H7, non-O157 Shiga toxin-producing E. coli, and Salmonella when prerigor beef carcass tissue was treated with a commercially available blend of lactic acid and citric acid (LCA) at a range of industry conditions of concentration, temperature, and pressure; (ii) determine the antimicrobial efficacy of LCA; and (iii) investigate the use of surrogates to validate a hot water and LCA sequential treatment as a carcass spray intervention in a commercial beef harvest plant. In an initial laboratory study, beef brisket tissue samples were left uninoculated or were inoculated (∼6 log CFU/cm(2)) on the adipose side with E. coli O157:H7 (5-strain mixture), non-O157 Shiga toxin-producing E. coli (12-strain mixture), Salmonella (6-strain mixture), or nonpathogenic E. coli (5-strain mixture). Samples were left untreated (control) or were treated with LCA, in a spray cabinet, at one of eight combinations of solution concentration (1.9 and 2.5%), solution temperature (43 and 60°C), and application pressure (15 and 30 lb/in(2)). In a second study, the E. coli surrogates were inoculated (∼6 log CFU/cm(2)) on beef carcasses in a commercial facility to validate the use of a hot water treatment (92.2 to 92.8°C, 13 to 15 lb/in(2)) followed by an LCA treatment (1.9%, 50 to 51.7°C, 13 to 15 lb/in(2), 10 s). In the in vitro study, surrogate and pathogen bacteria did not differ in their response to the tested LCA treatments. Treatment with LCA reduced (P < 0.05) inoculated populations by 0.9 to 1.5 log CFU/cm(2), irrespective of inoculum type. The hot water and LCA sequential treatments evaluated in the commercial facility reduced (P < 0.05) the inoculated nonpathogenic E. coli surrogates on carcasses by 3.7 log CFU/cm(2). This study therefore provides the meat industry with data for this sequential multiple hurdle system for the

  19. Assesing Bemisia tabaci (Genn. biotype B resistance in soybean genotypes: Antixenosis and antibiosis Evaluación de la resistencia de genotipos de soya a Bemisia tabaci (Genn. biotipo B: Antixenosis y antibiosis

    Directory of Open Access Journals (Sweden)

    José Paulo Gonçalves Franco da Silva

    2012-12-01

    Full Text Available Since it was first reported in Brazil in the 1990s, the B biotype of silverleaf whitefly (Bemisia tabaci Genn., Hemiptera: Aleyrodidae has been recognized as an important pest in soybeans (Glycine max L., reducing the productivity of this legume species in some areas of the country. As an alternative to chemical control, the use of resistant genotypes represents an important tool for integrated pest management (IPM. This study evaluated the performance of 10 soybean genotypes prior to whitefly infestation, by testing attractiveness and preference for oviposition in the greenhouse and antibiosis in the laboratory. In a multiple-choice test, 'IAC-17' was the least attractive to insects. In a no-choice test, 'IAC-17' was the least attractive for egg deposition, indicating the occurrence of non-preference for oviposition on this genotype. Trichome density was positively correlated with the oviposition site and may be associated with the resistance of 'IAC-17' to infestation. The genotypes 'IAC-PL1', 'IAC-19', 'Conquista', 'IAC-24' and 'IAC-17' extended the insect's life cycle, indicating the occurrence of a small degree of antibiosis and/or non-preference for feeding.Desde que se registró por primera vez en Brasil en la década de 1990, el biotipo B de la mosca-blanca (Bemisia tabaci Genn., Hemiptera: Aleyrodidae, se reconoce como una importante plaga de la soya (Glycine max L. y es lo que reduce la productividad de estas especies de leguminosas en algunas zonas del pais. Como una alternativa al control químico, el uso de genotipos resistentes representa una herramienta importante para la gestión integrada de plagas (MIP. Este trabajo evaluó el comportamiento de 10 genotipos de soya frente al ataque de la mosca-blanca, por medio de ensayos de atractividad y preferencia para ovipostura en invernaderos y antibiosis en laboratorio. En una prueba de elección multiple, 'IAC-17' fue el menos atractivo para los insectos. En una prueba sin elecci

  20. Efeito de extratos aquosos de meliáceas sobre Bemisia tabaci biótipo B em tomateiro Effect of aqueous extracts of meliaceous plants on Bemisia tabaci B biotype on tomato plants

    Directory of Open Access Journals (Sweden)

    ANTONIO PANCRÁCIO DE SOUZA

    2000-01-01

    Full Text Available Comparou-se a bioatividade de extratos aquosos a 3% (p/v de três meliáceas, Melia azedarach L. (frutos verdes, Trichilia pallida Swartz (ramos e Azadirachta indica A. Juss (sementes, em relação à mosca branca Bemisia tabaci (Gennadius biótipo B, criada em tomateiro. No primeiro experimento os extratos foram aplicados sobre ovos e sobre ninfas com três dias de idade, avaliando-se a mortalidade e a duração das fases de ovo e de ninfa. No segundo experimento os extratos foram aplicados apenas sobre as ninfas, avaliando-se a mortalidade nessa fase e a longevidade e fecundidade dos adultos. Em relação à fase de ovo, o extrato de T. pallida foi o que provocou maior mortalidade, seguindo-se os de A. indica e M. azedarach. A maior mortalidade ninfal foi constatada com o extrato de A. indica, seguindo-se os de T. pallida e M. azedarach. Nenhum dos extratos afetou a duração das fases de ovo e de ninfa, assim como a longevidade e fecundidade.The objective of this research was to compare the effect of aqueous extracts of fresh fruits of Melia azedarach L., twigs of Trichilia pallida Swartz and seeds of zadirachta indica A. Juss, on eggs and nymphs of silverleaf whitefly Bemisia tabaci (Gennadius B biotype reared on tomato plants. The extracts were tested at a concentration of 3%. In the first experiment, the extracts were applied on eggs and 3-day-old nymphs. Records were taken on mortality, duration of egg and nymphal stages. In the second experiment the extracts were applied on 3-day-old nymphs and records were taken on nymphal mortality, adult longevity and fecundity. The extracts of T. pallida were the most effective on eggs, followed by A. indica and M. azedarach. The extracts of A. indica were the most effective on nymphs followed by T. pallida and M. azedarach. In both experiments, the duration of egg and nymph stages, longevity and fecundity were not affected by the extracts.

  1. IBD-associated TL1A gene (TNFSF15 haplotypes determine increased expression of TL1A protein.

    Directory of Open Access Journals (Sweden)

    Kathrin S Michelsen

    Full Text Available BACKGROUND: The recently identified member of the TNF superfamily TL1A (TNFSF15 increases IFN-gamma production by T cells in peripheral and mucosal CCR9+ T cells. TL1A and its receptor DR3 are up-regulated during chronic intestinal inflammation in ulcerative colitis and Crohn's disease (CD. TL1A gene haplotypes increase CD susceptibility in Japanese, European, and US cohorts. METHODOLOGY AND PRINCIPAL FINDINGS: Here we report that the presence of TL1A gene haplotype B increases risk in Jewish CD patients with antibody titers for the E. coli outer membrane porin C (OmpC+ (Haplotype B frequency in Jewish CD patients: 24.9% for OmpC negative and 41.9% for OmpC positive patients, respectively, P< or =0.001. CD14+ monocytes isolated from Jewish OmpC+ patients homozygous for TL1A gene haplotype B express higher levels of TL1A in response to FcgammaR stimulation, a known inducing pathway of TL1A, as measured by ELISA. Furthermore, the membrane expression of TL1A is increased on peripheral monocytes from Jewish but not non-Jewish CD patients with the risk haplotype. CONCLUSIONS AND SIGNIFICANCE: These findings suggest that TL1A gene variation exacerbates induction of TL1A in response to FcgammaR stimulation in Jewish CD patients and this may lead to chronic intestinal inflammation via overwhelming T cell responses. Thus, TL1A may provide an important target for therapeutic intervention in this subgroup of IBD patients.

  2. Isolated Fallopian Tube Torsion

    Directory of Open Access Journals (Sweden)

    S. Kardakis

    2013-01-01

    Full Text Available Isolated torsion of the Fallopian tube is a rare gynecological cause of acute lower abdominal pain, and diagnosis is difficult. There are no pathognomonic symptoms; clinical, imaging, or laboratory findings. A preoperative ultrasound showing tubular adnexal masses of heterogeneous echogenicity with cystic component is often present. Diagnosis can rarely be made before operation, and laparoscopy is necessary to establish the diagnosis. Unfortunately, surgery often is performed too late for tube conservation. Isolated Fallopian tube torsion should be suspected in case of acute pelvic pain, and prompt intervention is necessary.

  3. Isolation and survival of Yersinia enterocolitica in ice cream at different pH values, stored at -18°c Isolamento e sobrevivência de Yersinia enterocolitica em sorvetes de distintos pH, armazenados a -18°C

    Directory of Open Access Journals (Sweden)

    Norma B. Barbini de Pederiva

    2000-09-01

    Full Text Available The presence of Yersinia enterocolitica was investigated in 203 samples of industrial (123 and non-industrial ice cream (80. Two Y. enterocolitica strains were isolated from non-industrial ice cream, which suggests the possibility of post-manufacturing contamination. One strain was typed as B:1A, O: 3,50,51; lis Xz, while the other one was biotyped as: B:1A but not serologically typed. Survival of Y. enterocolitica was investigated by inoculating nine samples of industrially manufactured ice cream to contain 20 CFU/ml of Y. enterocolitica and stored at -18°C for 480 days. The inoculated samples were classified into three different groups according to their pH (Group 1: pH 4-5; Group 2: pH 5-6 and Group 3: pH 6-7. Viability was determined by a combination of direct plating and enrichment. In Group 1, Y. enterocolitica was not detected after 150 days of storage, while in Groups 2 and 3, this microorganism was isolated until day 480 of storage. These findings suggest that the survival time of Y. enterocolitica in ice cream stored at -18°C is significantly (p Neste estudo pesquisou-se a presença de Yersinia enterocolitica em 203 amostras de sorvetes, sendo 123 de fabricação industrial e 80 de fabricação artesanal. Isolaram-se 2 cepas a partir de sorvetes artesanais, uma das quais foi caracterizada como B:1A, O:3,50, 51; lis Xz e a outra se tipificou como Y. enterocolitica B:1A mas não se tipificou sorologicamente, o que sugere uma contaminação pós processo. Em 9 dos sorvetes de fabricação industrial de distintos pH, estudou-se a sobrevivência desse microrganismo, inoculando-os com 20 UFC/ml de Y. enterocolitica, quando armazenados durante 480 dias a -18°C. Esses sorvetes, segundo seu pH, agruparam-se em: Grupo 1: pH: 4-5, Grupo 2: pH 5-6 e Grupo 3: pH: 6-7. Determinou-se a viabilidade pelas curvas de morte usando semeadura direta e enriquecimento. Nos sorvetes do grupo 1, Y. enterocolitica só foi detectada até o 150° dia de

  4. Isolated lingual leishmaniasis

    Directory of Open Access Journals (Sweden)

    Habibzadeh F

    2005-01-01

    Full Text Available Cutaneous leishmaniasis is endemic in Fars Province, southern Iran. However, mucosal leishmaniasis is extremely uncommon. Herein, we report a patient with isolated lingual leishmaniasis in an immunocompetent 40-year-old man. The lesion was totally excised. The patient was cured completely and is doing well after four years of follow-up, with no medical treatment

  5. Motion of isolated bodies

    Energy Technology Data Exchange (ETDEWEB)

    Choquet-Bruhat, Yvonne [Academie des Sciences, 23 Quai de Conti, 75270 Paris Cedex 06 (France); Friedrich, Helmut [Max-Planck-Institut fuer Gravitationsphysik, Am Muehlenberg 1, 14476 Golm (Germany)

    2006-10-21

    It is shown that sufficiently smooth initial data for the Einstein-dust or the Einstein-Maxwell-dust equations with non-negative density of compact support develop into solutions representing isolated bodies in the sense that the matter field has spatially compact support and is embedded in an exterior vacuum solution.

  6. Motion of Isolated bodies

    CERN Document Server

    Choquet-Bruhat, Y; Choquet-Bruhat, Yvonne; Friedrich, Helmut

    2006-01-01

    It is shown that sufficiently smooth initial data for the Einstein-dust or the Einstein-Maxwell-dust equations with non-negative density of compact support develop into solutions representing isolated bodies in the sense that the matter field has spatially compact support and is embedded in an exterior vacuum solution.

  7. ISOLATED MOLECULES IN METALS

    NARCIS (Netherlands)

    1992-01-01

    In this paper, some results obtained on the formation of isolated molecules of composition SnOx in silver and SnFx in copper-are reviewed. Hyperfine interaction and ion beam interaction techniques were used for the identification of these molecules.

  8. Biological Isolation Garment

    Science.gov (United States)

    1976-01-01

    A spinoff of astronaut's biological garment will allow hospital patients who are highly vulnerable to infection to leave their sterile habitats for several hours, carrying their germ free environment with them. Garments can be used in any of some 200 hospitals where isolation rooms are installed to treat leukemia.

  9. Isolated jejunal varices.

    Directory of Open Access Journals (Sweden)

    Bhagwat S

    1995-04-01

    Full Text Available Isolated jejunal varices are an uncommon manifestation of portal hypertension. A one and a half year old boy presented with recurrent, massive gastrointestinal bleeding from jejunal varices. The bleeding site was identified at exploratory laparotomy. Jejunal resection and anastomosis resulted in complete resolution of the bleeding and there has been no recurrent bleeding over an eight month follow-up period.

  10. Proteoglycan isolation and analysis

    DEFF Research Database (Denmark)

    Woods, A; Couchman, J R

    2001-01-01

    Proteoglycans can be difficult molecules to isolate and analyze due to large mass, charge, and tendency to aggregate or form macromolecular complexes. This unit describes detailed methods for purification of matrix, cell surface, and cytoskeleton-linked proteoglycans. Methods for analysis...

  11. Lengthened-handle biotype total hip arthroplasty with spiral cerclage band for the treatment of aged patients with femoral intertrochanteric fracture%加长柄生物型人工全髋关节置换结合钛捆绑带治疗老年股骨粗隆间骨折

    Institute of Scientific and Technical Information of China (English)

    骆浩; 陈友浩; 张友; 谢鲤钟; 周继斌; 李章华; 刘忠厚

    2012-01-01

    Objective To investigate the clinical efficacy of treatment using lengthened-handle biotype total hip arthroplasty with spiral cerclage band on aged patients with femoral intertrochanteric fracture. Methods Twenty-three patients with femoral intertrochanteric fracture in our department from January 2006 to January 2011, treated with lengthened-handle biotype total hip arthroplasty with spiral cerclage band, were selected. The clinical efficacy and safety were evaluated. Results All the patients were followed up from 6 to 38 months. The function of the hip was graded with Harris system; excellent in 7 cases, good in 10 cases, fair in 5 cases, and poor in 1 case. The percentage of excellent and good was 73.91% and total patient satisfaction was 100%. No fracture deformity, artificial joint dislocation, infection, loosening, and down-place occurred. Conclusion For aged patients with femoral intertrochanteric fracture, lengthened-handle biotype total hip arthroplasty with spiral cerclaged band is a safe and efficient method.%目的 探讨钛捆绑带结合加长柄生物型人工全髋关节置换术治疗老年股骨粗隆间骨折的临床疗效.方法 对2006年1月至2011年1月收入我科的23例老年股骨粗隆间骨折患者,采用钛捆绑带结合加长柄生物型人工全髋关节置换术进行治疗,评价其临床疗效与安全性.结果 所有患者随访6月~38月,按Harris髋关节功能评定,优7例,良10例,中5例,差1例,优良率为73.91%,患者满意度100%;无骨折畸形、人工关节脱位、感染、假体松动、假体下沉等情况发生.结论 对老年股骨粗隆间骨折,钛捆绑带结合生物型假体行全髋关节置换术是一种安全有效的方法.

  12. Offset trench isolation

    Science.gov (United States)

    Roth, S. S.; Cooper, K. J.; Ray, W.; Kirsch, H. C.; Grove, Charlotte

    1994-08-01

    Feasibility of a new, recessed isolation technique that utilizes an offset, shallow trench in combination with thermal oxidation for achieving near zero final encroachment with excellent planarity is demonstrated. Etch of the shallow trench is offset from the original hardmask by an oxide sidewall spacer. After trench etch, HF is used to remove the hardmask oxide and sidewall spacers and to form a cavity which is self-aligned to the nitride edge. Exposed silicon regions are then reoxidized and encapsulated with polysilicon. Field oxide is then grown. The final field oxide profile exhibits steep sidewall angles without inducing substrate defects as evidenced by low diode leakage. Other isolation sensitive device parametrics such as gate oxide quality and metal oxide semiconductor field effect transistor threshold voltage stability are presented and exhibit good characteristics.

  13. Main: TGA1ANTPR1A [PLACE

    Lifescience Database Archive (English)

    Full Text Available TGA1ANTPR1A S000247 16-Feb-2001 (last modified) seki TGA1a binding site in tobacco ...(N.t.) PR1a gene; as-1-like sequence; Contains two TGACG elements reminiscent of activation sequence-1 (as-1...); See other as-1-like sequences; TGA1a is preferentially expressed in root tip meristems; TGA1a may contrib...ute to the expression of GST isoenzymes, especially in root tip meristems; TGA1a;... as-1; PR1a; xenobiotic stress; root; tip; meristem; tobacco (Nicotiana tabacum) CGTCATCGAGATGACG ...

  14. Isolated unilateral disk edema

    Directory of Open Access Journals (Sweden)

    Varner P

    2011-07-01

    Full Text Available Paul VarnerJohn J Pershing VAMC, Poplar Bluff, MO, USAAbstract: Isolated unilateral disk edema is a familiar clinical presentation with myriad associations. Related, non-consensus terminology is a barrier to understanding a common pathogenesis. Mechanisms for the development of disk edema are reviewed, and a new framework for clinical differentiation of medical associations is presented.Keywords: disk edema, axoplasmic flow, clinical multiplier, optic neuritis, ischemic optic neuropathy, papilledema

  15. Isolated Pulmonary Valve Endocarditis

    Directory of Open Access Journals (Sweden)

    Mohammad Ali Hatamizadeh

    2009-06-01

    Full Text Available Infective endocarditis is one of the most severe complications of parenteral drug abuse. The outstanding clinical feature of infective endocarditis in intravenous drug abusers is the high incidence of right-sided valve infection, and the tricuspid valve is involved in 60% to 70% of the cases. We herein report a case of isolated pulmonic valve infective endocarditis with a native pulmonary valve.

  16. Isolated unilateral disk edema

    OpenAIRE

    Varner P

    2011-01-01

    Paul VarnerJohn J Pershing VAMC, Poplar Bluff, MO, USAAbstract: Isolated unilateral disk edema is a familiar clinical presentation with myriad associations. Related, non-consensus terminology is a barrier to understanding a common pathogenesis. Mechanisms for the development of disk edema are reviewed, and a new framework for clinical differentiation of medical associations is presented.Keywords: disk edema, axoplasmic flow, clinical multiplier, optic neuritis, ischemic optic neuropathy, papi...

  17. Indutores de resistência à mosca-branca Bemisia tabaci Biótipo B (GENN., 1889 (Hemiptera: Aleyrodidae em soja Resistance inducers to the whitefly Bemisia tabaci Biotype B (GENN., 1889 (Hemiptera: Aleyrodidae in soybeans

    Directory of Open Access Journals (Sweden)

    Jair Campos Moraes

    2009-10-01

    Full Text Available Objetivou-se, neste trabalho, avaliar o efeito da aplicação de indutores na resistência de duas cultivares de soja à mosca-branca Bemisia tabaci biótipo B. O experimento foi conduzido no Departamento de Entomologia - UFLA. As sementes de soja, cultivar IAC-19 e MONSOY-8001, foram previamente tratadas com o fungicida captan. Foram testados os seguintes tratamentos: T1- irrigação no solo, ao redor das plantas de cada vaso, de 250 mL de solução de ácido silícico a 1%; T2- pulverização das plantas, até o ponto de escorrimento, com solução a 0,3% de acibenzolar-s-methyl; T3- pulverização das plantas, até o ponto de escorrimento, com calda a 0,24% de pyraclostrobin+epoxiconazole e T4- testemunha. As plantas foram infestadas com 100 adultos da mosca-branca por vaso que liberados oito dias após a aplicação dos tratamentos. Avaliaram-se o número de ovos na face abaxial de cada folha, que foi marcada para posterior avaliação de ninfas; teores de taninos e de lignina; peso seco das raízes e da parte aérea. Não houve diferença para número de ovos e ninfas entre as cultivares de soja, porém, a viabilidade média de B. tabaci foi menor a cultivar IAC-19. O cultivar de soja IAC-19 demonstrou moderada resistência ao biótipo B de B. tabaci. A aplicação de silício ou acibenzolar-s-methyl induz um aumento no teor de lignina na cultivar de soja IAC-19.The objective of this paper was to evaluate the effect of the application of inducers on the resistance of two soybean cultivars to the whitefly B. tabaci Biotype B. The experiment was carried out at the Entomology Department - UFLA. The soybean seeds of cultivars IAC-19 and MONSOY-8001 were previously treated with Captan fungicide. The following treatments were tested: T1- irrigating the soil around the plants of each pot with 250 mL of solution of 1% silicic acid; T2- spraying of the plants, to the 'point of dripping', with a solution of 0.3% acibenzolar-s-methyl; T3- spraying of

  18. Toxicity of neem oil to Bemisia tabaci biotype B nymphs reared on dry bean Toxicidade de óleo de nim para ninfas de Bemisia tabaci biótipo B criadas em feijoeiro

    Directory of Open Access Journals (Sweden)

    Patricia Valle Pinheiro

    2009-04-01

    Full Text Available The objective of this work was to determine the most susceptible nymphal stage of Bemisia tabaci biotype B to neem (Azadirachta indica A. Juss. oil applied to dry bean (Phaseolus vulgaris L. in a screenhouse. A solution of commercial oil (Dalneem extracted from neem seeds was sprayed directly on each nymphal instar at 0, 0.1, 0.25, 0.5, 1 and 2% concentrations for lethal concentration (LC determination, and at 0, 0.5 and 1% concentrations for lethal time (LT determination. The number of living and dead nymphs was recorded five days after spraying for LC determination, and daily during six days for LT determination. The LC50 estimated for fourth instar nymphs occurred at 0.56% concentration. For all instars, LC50 and LC95 were estimated at 0.32 and 2.78% concentrations, respectively. The estimated values of LT50 at 1% concentration were 2.46, 4.45, 3.02 and 6.98 days for the first to fourth instars, respectively. The LT50 occurred at five days for 0.5% and at four days for 1% concentration in all instars. A mortality rate of over 80% was observed on the 6th day for the first to third instars at 1% concentration. The first three nymphal stages were more susceptible to neem oil when compared to the fourth nymphal stage.O objetivo deste trabalho foi determinar o estágio ninfal de Bemisia tabaci biótipo B mais suscetível ao óleo de nim (Azadirachta indica A. Juss. aplicado em feijoeiro (Phaseolus vulgaris L., em casa telada. Foram avaliados o tempo letal (TL e concentração letal (CL do óleo comercial de sementes de nim Dalneem. Para CL, concentrações de 0, 0,1, 0,25, 0,5, 1 e 2% do produto foram pulverizadas diretamente sobre as ninfas em cada ínstar. Para TL, o produto foi avaliado a 0, 0,5 e 1% de óleo de nim em cada ínstar. Ninfas vivas e mortas foram contadas cinco dias após a pulverização para CL e diariamente para TL durante seis dias. Para o quarto ínstar, a CL50 foi de 0,56% de óleo de nim. Considerando todos os ínstares, CL

  19. Comparison of electrophoretic protein profiles of Campylobacter jejuni subsp. jejuni isolated from different animal species Comparação dos perfis eletroforéticos de proteínas de Campylobacter jejuni subsp. jejuni isoladas de diferentes espécies animais

    Directory of Open Access Journals (Sweden)

    Eliana Scarcelli

    2001-12-01

    Full Text Available Electrophoretic protein profiles of Campylobacter jejuni subsp. jejuni strains isolated from feces of seven animal species, including man, were compared. Fourteen strains (two from each species plus two human strains and the reference one, were ruptured by ultrasound and their total soluble proteins were analyzed by SDS-PAGE technique in a 12% polyacrylamide gel with computerized densitometric reading by the molecular analyst software. All the strains had bands in common that correspond to 45 and 66 Kda molecular weight. The disagreement corresponded to a 97 to 200 Kda molecular weight region. From the 17 strains, 13 (76.5%, were classified as biotype I, three (17.6% as biotype II and one (5.8% as biotype III. Since protein extracts were obtained from cells grown under identical conditions, and thus, able to express the same phenotype, this disagreement region could be related to different genotypes or serotypes.Perfis eletroforéticos de proteínas de cepas Campylobacter jejuni subsp. jejuni isoladas de fezes de diferentes espécies animais, inclusive o homem, foram comparados. Quatorze cepas (duas de cada espécie mais duas cepas de origem humana e a cepa de referência foram rompidas por ultra-som e suas proteínas solúveis totais analisadas através das técnicas de SDS-PAGE em gel de poliacrilamida a 12% e análise densitométrica. Todas as cepas tinham em comum bandas que migraram em regiões que correspondiam ao peso molecular de 45 e 66 Kda. As regiões discordantes correspondiam principalmente às regiões entre 97 e 200 Kda. Das 17 cepas, 13 (76.5%, foram classificadas como biotipo I, três (17.6% como biotipo II e uma (5.8% como biotipo III. Uma vez que os extratos de proteínas foram obtidos de células que se desenvolveram sob condições idênticas, possibilitando a expressão do mesmo fenótipo, estas regiões protéicas discordantes poderiam estar relacionadas a diferentes sorotipos ou genótipos.

  20. Isolation by distance, web service

    OpenAIRE

    Bohonak Andrew J; Jensen Jeffrey L; Kelley Scott T

    2005-01-01

    Abstract Background The population genetic pattern known as "isolation by distance" results from spatially limited gene flow and is a commonly observed phenomenon in natural populations. However, few software programs exist for estimating the degree of isolation by distance among populations, and they tend not to be user-friendly. Results We have created Isolation by Distance Web Service (IBDWS) a user-friendly web interface for determining patterns of isolation by distance. Using this site, ...

  1. Efecto del glifosato sobre el crecimiento y acumulación de azúcares libres en dos biotipos de lolium perenne de distinta sensibilidad al herbicida Glyphosate effects on the growth and free sugar accumulation of two lolium perenn e biotypes with different herbicide sensitivity

    Directory of Open Access Journals (Sweden)

    M. Yanniccari

    2012-03-01

    glyphosate on the growth and free sugar accumulation of two Lolium perenne biotypes of low and high glyphosate sensitivity. It was worked with clones of both types, in tillering, sprayed with 1,440 g a.e. ha-1 of glyphosate as treatments and without herbicide as controls. The glyphosate effects on the regrowth of leaves was studied until 50 hours post-application and on total free sugar, reducing free sugar and nonreducing free sugar from leaves to 1, 2, 3 and 5 days post-application were periodically evaluated. From 25 hours after glyphosate application, it caused on the susceptible biotype a growth decrease of 58% and an accumulation of free sugar above 90% compared to controls. In susceptible biotypes, growth inhibition does not depend on a reduced photoassimilate translocation from the overground part. Therefore, the free sugar accumulation in leaves could be explained by the fall in the rate of growth. These effects are limited in the low sensitivity biotype, where growth inhibition has not been detected.

  2. Effect of bean genotypes, insecticides, and natural products on the control of Bemisia tabaci (Gennadius biotype B (Hemiptera: Aleyrodidae and Caliothrips phaseoli (Hood (Thysanoptera: Thripidae = Efeito de genótipos de feijoeiro, inseticida e produtos naturais no controle Bemisia tabaci (Gennadius biotipo B (Hemiptera: Aleyrodidae e Caliothrips phaseoli (Hood (Thysanoptera: Thripidae

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    Júlio Cesar Janini

    2011-07-01

    Full Text Available Effect of bean genotypes, insecticides, and natural products on the control of Bemisia tabaci (Gennadius biotype B (Hemiptera: Aleyrodidae and Caliothrips phaseoli (Hood (Thysanoptera: Thripidae. The influence of bean genotypes associated with neem oil as insecticide was evaluated to control B. tabaci (Gennadius biotype B and C. phaseoli (Hood during the wet season sowing. The experimental design used was the randomized block arrangement in a 4x4x3 factorial scheme, represented by genotypes, neem oil and insecticides respectively, with three replications. The genotypes Carioca, IAC Harmonia, IAC Centauro and Pérola were used. The evaluations were done at 14 and 42 days after seedling emergence, bycounting B. tabaci biotype B eggs and nymphs and C. phaseoli nymphs in the genotypes leaf. Conclusion: The B. tabaci biotype B eggs and nymphs number were smaller in IAC Centauro and higher in IAC Harmonia. The tested genotypes were similarly infested by C. phaseoli. IAC Centauro and IAC Harmonia genotypes associated with neem oil (highlighting the full dose – 1% provided lower number of whitefly eggs and thrips nymphs. Neem oil at the full dose alsoreduced whitefly nymph number. In the tested genotypes the insecticide provided reduction in the number of whitefly eggs and nymphs as well in the thrips nymphs, with increase in therecommend dose. Avaliou-se a influência de genótipos de feijoeiro associado à aplicação de óleo de nim e inseticida no controle de B. tabaci (Gennadius biótipo B e C. phaseoli (Hood na época de semeadura “das águas”. O delineamento experimental utilizados foi o de blocos casualizados dispostos em um esquema fatorial 4 x 3 x 3, representado por variedades, óleo de nim e inseticidas, respectivamente, com três repetições. Utilizaram-se os genótipos Carioca, IAC Harmonia, IAC Centauro e Pérola. As avaliações foram realizadas dos 14 aos 42 dias após a emergência das plantas, contando-se o número de ovos e

  3. Susceptibilidade de lagartas dos biótipos milho e arroz de Spodoptera frugiperda (J.E. Smith, 1797 (Lepidoptera: Noctuidae a inseticidas com diferentes modos de ação Susceptibility of caterpillars of the biotypes corn and rice of Spodoptera frugiperda (J.E. Smith, 1797 (Lepidoptera: Noctuidae to insecticides with different action manners

    Directory of Open Access Journals (Sweden)

    Gustavo Rossato Busato

    2006-02-01

    Full Text Available O objetivo do trabalho foi avaliar a susceptibilidade de lagartas dos biótipos milho e arroz de Spodoptera frugiperda, a inseticidas com diferentes modos de ação. Os insetos foram coletados em milho e em arroz irrigado no agroecossistema de várzea, município de Pelotas, região que produz milho e arroz irrigado (lado a lado. Os experimentos foram realizados, em condições controladas de temperatura (25 ± 1°C, umidade relativa (70 ± 10% e fotofase (14 horas, utilizando-se folhas do híbrido de milho Pionner 30F33 (40 dias após a emergência. As folhas pulverizadas em torre de Potter calibrada para aplicação de um volume de calda de 1,7 ± 0,305mg cm-2, foram colocadas em recipientes de plásticos com tampa, sendo individualizadas 25 lagartas de 3° ínstar de cada biótipo de S. frugiperda. Os inseticidas e concentrações avaliados foram: clorpirifós [Lorsban 480 BR, 0,960g i.a. L-1 (Organofosforado], lambda-cialotrina [Karate Zeon 50 CE, 0,003g i.a. L-1 (Piretróide sintético], lufenuron [Match CE, 0,006g i.a. L-1 (Aciluréia], methoxifenozide [Intrepid 240 SC, 0,158g i.a. L-1 (Diacilhidrazina] e spinosad [Tracer, 0,960g i.a. L-1 (Naturalyte]. A avaliação da mortalidade foi realizada 24, 48, 72, 96 e 120 horas após o tratamento. O biótipo milho de S. frugiperda foi menos suscetível aos inseticidas lambda-cialotrina, lufenuron e methoxifenozide. Os inseticidas clorpirifós e spinosad foram eficientes no controle das lagartas dos biótipos milho e arroz de S. frugiperda.The objective of this work was to evaluate the susceptibility of caterpillars of the biotypes corn and rice of Spodoptera frugiperda, to insecticides with different action manners. The insects were collected in corn and in irrigated rice in the lowland, county of Pelotas, area that produces corn and irrigated rice (side by side. The experiments were conducted, in controlled conditions of temperature (25 ± 1°C, relative humidity (70 ± 10% and photophase (14

  4. Análise de crescimento de biótipos de amendoim-bravo (Euphorbia heterophylla resistente e suscetível aos herbicidas inibidores da ALS Growth analysis of wild poinsettia (Euphorbia heterophylla biotypes resistant and susceptible to ALS inhibitor herbicides

    Directory of Open Access Journals (Sweden)

    A.M. Brighenti

    2001-04-01

    Full Text Available A aplicação contínua de herbicidas do grupo químico das imidazolinonas, nas mesmas áreas de produção de soja, durante anos seguidos, no município de Cafelândia, PR, favoreceu a seleção de um biótipo resistente de amendoim-bravo (Euphorbia heterophylla aos herbicidas inibidores da acetolactato sintase (ALS. Um estudo comparativo das características do crescimento do biótipo resistente e do suscetível foi realizado em casa de vegetação da Embrapa Soja, Londrina-PR, a fim de identificar diferenças no crescimento e no desenvolvimento das plantas e de seus órgãos. A produção de matéria seca total, a área foliar, a matéria seca dos caule, das raízes e das folhas, bem como a altura por planta, foram avaliadas em 13 vezes a intervalos regulares, iniciando aos 14 dias após a semeadura. A partir desses parâmetros, foram calculadas a taxa de crescimento relativo, a taxa assimilatória líquida, a razão de área foliar, a razão de peso foliar e a área foliar específica, que decrescem com a ontogenia das plantas de amendoim-bravo, sendo similares para ambos os biótipos. A matéria seca total acumulada pelas plantas e seus órgãos, a área foliar e a altura apresentaram comportamentos semelhantes para os biótipos resistente e suscetível. O ciclo vegetativo dos dois biótipos estudados não mostrou diferença significativa quanto ao crescimento e ao desenvolvimento.Repetitive spraying of imidazolinone herbicides year after year to control weeds in the soybean grown areas of Cafelândia, Paraná, Brazil, has favored the selection of an ALS (acetolactate synthase inhibitor herbicide resistant biotype of wild poinsettia (Euphorbia heterophylla. A comparative study of growth and development of wild poinsettia resistant and susceptible to ALS inhibitor herbicides was carried out in the greenhouse of the experimental station of Soybean Embrapa in Londrina, Paraná, Brazil. Total dry biomass yield, leaf area, shoot dry weight, leaf

  5. Adult oviposition and larvae feeding behavior of Spodoptera litura ( Lepidoptera: Noctuidae)on tobacco plants after infested by B-biotype Bemisia tabaci (Homoptera: Aleyrodidae)%B型烟粉虱为害烟草后对斜纹夜蛾成虫产卵和幼虫取食行为的影响

    Institute of Scientific and Technical Information of China (English)

    王洪涛; 薛明; 陈会娜; 周方园

    2011-01-01

    为明确外来入侵害虫B型烟粉虱取食诱导的烟草防御反应对斜纹夜蛾的影响,探讨其与斜纹夜蛾的种间竞争机制,在室内条件下研究了B型烟粉虱取食后的烟草对斜纹夜蛾成虫产卵选择、幼虫取食选择、拒食作用和其他取食行为指标的影响.结果表明:斜纹夜蛾成虫在B型烟粉虱为害后的植株上的落卵量较对照植株降低了40.9%.B型烟粉虱为害的虫体叶对斜纹夜蛾初孵化幼虫具有明显的驱避作用,而中间叶和系统白脉叶有一定的吸引作用,心叶不影响幼虫对寄主的选择性.B型烟粉虱为害叶片对斜纹夜蛾幼虫具有显著的拒食作用,虫体叶拒食作用明显大于系统白脉叶片.与对照相比,B型烟粉虱为害的虫体叶和系统白脉叶降低了斜纹夜蛾幼虫单位时间取食次数或取食比例,虫体叶还显著延长了幼虫开始取食时间,总取食面积显著减少.表明B型烟粉虱为害烟草对斜纹夜蛾成虫产卵和幼虫取食行为均产生不利影响.研究结果对了解烟田害虫种群变动规律和指导害虫治理具有较大意义.%To understand the effects of the defense responses of tobacco plants induced by the infesting of B-biotype Bemisia tabaci to Spodoptera litura , and to explore the mechanisms of the interspecific interactions between B-biotype B. tabaci and S. litura. a laboratory experiment was conducted to study the effects of tobacco plants after infested by B-biotype B. tabaci on the adult oviposition selection and the larvae feeding, anti-feeding, and other feeding behaviors of S. litura. Comparing with that on control plants, the egg number oviposited by adult S. litura on the infested plants decreased by 40.9% . The plant leaves infested had great repellent effect to the newly-hatched S. litura larvae. while the middle leaves and the leaves with systemic damage symptom ( white-vein) had definite attractive effect. Unexpanded terminal leaves had no effects on

  6. Quimiotipagem do Cryptococcus neoformans. Revisão da literatura. Novos dados epidemiológicos sobre a criptococose. Nossa experiência com o emprego do meio de C.G.B. no estudo daquela levedura Biotyping of Cryptococcus neoformans. Review of the literature. New epidemiologic informations about cryptococcosis. Our experience with the utilization of C.G.B medium in this yeast

    Directory of Open Access Journals (Sweden)

    Natalina Takahashi de Melo

    1993-10-01

    about the biotyping of Cryptococcus neoformans. The more up-to date research concerning the epidemiology of cryptococcosis comprising quite a few articles, mainly after the advent of AIDS, was also reviewed. The Cryptococcus neoformans varieties neoformans and gattii are well defined biochemically nowadays chiefly through the C.G.B. medium, according to KWON-CHUNG et al. (198224. The isolation of C. neoformans var. gattii from flowers and leaves of Eucalyptus camaldulensis and Eucalyptus tereticornis, specially in Australia, through the works of ELLIS & PFEIFFER (1990 16 and PFEIFFER & ELLIS (1992 41 permitted very interesting epidemiological investigations on C. neoformans, a capsulaled yeast by which SANFELICE 50, 51, in Italy (1894; 1895 attracted attention of medical class. BUSSE 8, in 1894, described the first human case of cryptococcosis under the presentation of a bone lesion simulating sarcoma. In this paper, the Brazilian researchers focused on this subject were pointed out, followed by the Author's experience with the C.G.B medium (L - canavanine, glycin and bromothymol blue proposed by KWON-CHUNG et al. (1982 24 with very good results. It was possible with such medium the study of 50 C.N.S. liquor samples, being 39 from AIDS patients (78% and 11 from non-AIDS ones (22%. Thirty-seven out of the 39 HIV- positive patients (74% were identified as C. neoformans var. neoformans and 2 (4% as C. neoformans var. gattii. From the negative HIV, 8 (16% were classified as C. neoformans var. neoformans and 3 (6% as C. neoformans var. gattii. We could not perform the serotyping of the above referred samples. It is evident anyway that in Brazil there exist both varieties gattii and neoformans, agents of neurocryptococcosis, including AIDS patients. The importance of neurocryptococcosis, mainly among AIDS patients, is stressed here, showing once more the value of C.G.B. medium in the typing of C. neoformans in its two varieties. Also, it is of relevant importance the

  7. Plantaricin IIA-1A5 from Lactobacillus plantarum IIA-1A5 displays bactericidal activity against Staphylococcus aureus.

    Science.gov (United States)

    Arief, I Isnafia; Budiman, C; Jenie, B Sri Laksmi; Andreas, E; Yuneni, A

    2015-01-01

    Plantaricin IIA-1A5 is a bacteriocin produced by Lactobacillus plantarum IIA-1A5 isolated from Indonesian beef. This research aimed to identify the genes involved in plantaricin IIA-1A5 production and examine its mode of action against Staphylococcus aureus. It has been reported that a bacteriocin structural gene, plnW, is present in genome of L. plantarum IIA-1A5. Here, we reported the presence of additional genes responsible for plantaricin precursor (plnA and plnEF) and a gene encoding the quorum sensor of histidine kinase (plnB). It indicates that genes involved in production of plantaricin IIA-1A5 are organized in at least two bacteriocin operons (plnABCD, plnEFI) and a structural plnW gene. Purified plantaricin IIA-1A5 yielded a single band in SDS-PAGE with apparent size of 6.4 kDa. Amino acid composition of purified plantaricin IIA-1A5 was mainly composed of cationic glutamic acid and cysteine that allowed the formation of disulphide bonds, suggesting plantaricin IIA-1A5 belongs to the pediocin-subclass of class II bacteriocins. Plantaricin IIA-1A5 displayed remarkable antibacterial activity against S. aureus, which was initiated by the adsorption of plantaricin IIA-1A5 onto the cell membrane of S. aureus. The adsorption is hypothesised to be facilitated by non-ionic interactions as it is reduced by the presence of organic solvents or detergents. This adsorption promoted leakage of cellular metabolites through the cell membrane of S. aureus, as indicated by the release of genetic and proteinaceous material of S. aureus observed at 260 and 280 nm, respectively. The leakage also promoted the release of divalent (Ca(2+), Mg(2+)) and monovalent (K(+)) cations. The release of these intracellular components might be due to pores formed in the cell membrane of S. aureus by plantaricin IIA-1A5 as shown by scanning electron microscopy. Altogether, the mode of action of plantaricin IIA-1A5 against S. aureus seems to be bactericidal as indicated by lysis of the cell

  8. Plutonium interaction with a bacterial strain isolated from the waste isolation pilot plant (WIPP) environment

    Energy Technology Data Exchange (ETDEWEB)

    Strietelmeier, B.A.; Kraus, S.M.; Leonard, P.A.; Triay, I.R. [Los Alamos National Lab., NM (United States)] [and others

    1996-12-31

    This work was conducted as part of a series of experiments to determine the association and interaction of various actinides with bacteria isolated from the WIPP site. The majority of bacteria that exist at the site are expected to be halophiles, or extreme halophiles, due to the high concentration of salt minerals at the location. Experiments were conducted to determine the toxicity of plutonium-n-239, neptunium-237 and americium-243 to several species of these halophiles and the results were reported elsewhere. As an extension of these experiments, we report an investigation of the type of association that occurs between {sup 239}Pu and the isolate WIPP-1A, isolated by staff at Brookhaven National Laboratory, when grown in a high-salt, defined medium. Using scanning electron microscopy (SEM) techniques, we demonstrate a surface association of the {sup 239}Pu with the bacterial cells.

  9. Diabetes in population isolates

    DEFF Research Database (Denmark)

    Grarup, Niels; Moltke, Ida; Albrechtsen, Anders

    2015-01-01

    Type 2 diabetes (T2D) is an increasing health problem worldwide with particularly high occurrence in specific subpopulations and ancestry groups. The high prevalence of T2D is caused both by changes in lifestyle and genetic predisposition. A large number of studies have sought to identify...... on glucose-stimulated plasma glucose, serum insulin levels, and T2D. The variant defines a specific subtype of non-autoimmune diabetes characterized by decreased post-prandial glucose uptake and muscular insulin resistance. These and other recent findings in population isolates illustrate the value...

  10. [Isolated Ledderhose fibromatosis plantaris].

    Science.gov (United States)

    Runkel, N; Göhring, U; Friedl, W; Roeren, T

    1993-07-01

    Plantar fibromatosis or Ledderhose syndrome has rarely been discussed in the medical literature. This clinical entity includes nodular Dupuytren-like indurations of the plantar aponeurosis. We present a case of a young man with isolated disease of his right foot and describe the clinical and pathomorphological features of this disease as well as its characteristic findings at magnetic resonance tomography. The therapy of choice is a subtotal resection of the plantar aponeurosis to prevent irreversible contractions of the toes. The prognosis following fascietomy is good.

  11. NORMOLIPEMIC ISOLATED XANTHOMA

    Directory of Open Access Journals (Sweden)

    Gowri Sankar

    2013-10-01

    Full Text Available ABSTRACT: Xanthomas are often a manifestation of underlying lipid abnormalities.A 17 - year - old female presented to our hospital with pain and swelling over t he left knee joint.Routine investigations and lipid profile were normal. Dermatological examination and Psychiatric examination were done and found to be normal. Histopathology from the lesion revealed macrophages and Touton type of giant cells. We present a case of normolipemic isolated xanthoma, which not only is an an uncommon occurrence but also needs a regular follow up because a high association with reticuloendothelial malignancies has also been reported.

  12. Journey from isolation

    Directory of Open Access Journals (Sweden)

    Wim A. Dreyer

    2011-06-01

    Full Text Available Since the Ottawa Consultation in 1982, the relationship between the Nederduitsch Hervormde Kerk van Afrika (NHKA and the World Alliance of Reformed Churches (WARC was nonexistent. In the NHKA it became progressively clear that it would be impossible to travel the road of faith alone. This article examined the factors which contributed to the growing isolation of the NHKA, especially nationalism, a particularistic ecclesiology and the rejection of Apartheid by international ecumenical bodies. It also reflected on efforts of the NHKA to return to the international ecumenical movement.

  13. Minimum Data Set Q1a Report

    Data.gov (United States)

    U.S. Department of Health & Human Services — The MDS Q1a report summarizes, by state and county, percentages of residents that answered Yes to Q1a - Residents expresses or indicates preference to return to the...

  14. Isolation of Mouse Neutrophils.

    Science.gov (United States)

    Swamydas, Muthulekha; Luo, Yi; Dorf, Martin E; Lionakis, Michail S

    2015-08-03

    Neutrophils represent the first line of defense against bacterial and fungal pathogens. Indeed, patients with inherited and acquired qualitative and quantitative neutrophil defects are at high risk for developing bacterial and fungal infections and suffering adverse outcomes from these infections. Therefore, research aiming at defining the molecular factors that modulate neutrophil effector function under homeostatic conditions and during infection is essential for devising strategies to augment neutrophil function and improve the outcome of infected individuals. This unit describes a reproducible density gradient centrifugation-based protocol that can be applied in any laboratory to harvest large numbers of highly enriched and highly viable neutrophils from the bone marrow of mice both at the steady state and following infection with Candida albicans as described in UNIT. In another protocol, we also present a method that combines gentle enzymatic tissue digestion with a positive immunomagnetic selection technique or Fluorescence-activated cell sorting (FACS) to harvest highly pure and highly viable preparations of neutrophils directly from mouse tissues such as the kidney, the liver or the spleen. Finally, methods for isolating neutrophils from mouse peritoneal fluid and peripheral blood are included. Mouse neutrophils isolated by these protocols can be used for examining several aspects of cellular function ex vivo including pathogen binding, phagocytosis and killing, neutrophil chemotaxis, oxidative burst, degranulation and cytokine production, and for performing neutrophil adoptive transfer experiments.

  15. Schizosaccharomyces isolation method

    Directory of Open Access Journals (Sweden)

    Benito Santiago

    2014-01-01

    Full Text Available This study discusses the optimization of a selective and differential medium which would facilitate the isolation of Schizosaccharomyces (a genus with a low incidence compared to other microorganisms to select individuals from this genus for industrial purposes, especially in light of the recent recommendation of the use of yeasts from this genus in the wine industry by the International Organisation of Vine and Wine, or to detect the presence of such yeasts, for those many authors who consider them food spoilers. To this end, we studied various selective differential agents based on the main physiological characteristics of these species, such as their high resistances to high concentrations of sugar, sulfur dioxide, sorbic acid, benzoic acid, acetic acid or malo ethanolic fermentation. This selective medium is based on the genus resistance to the antibiotic actidione and its high resistance to inhibitory agents such as benzoic acid. Malic acid was used as a differential factor due to the ability of this genus to metabolise it to ethanol, which allows detecting of the degradation of this compound. Lastly, the medium was successfully used to isolate strains of Schizosaccharomyces pombe from honey and honeycombs.

  16. Candiduria in a public hospital of São Paulo (1999-2004: characteristics of the yeast isolates Candiduria em hospital público de São Paulo (1999-2004: características das leveduras isoladas

    Directory of Open Access Journals (Sweden)

    Elza Helena da Silva

    2007-12-01

    Full Text Available The study involved 100 yeast isolates, obtained from urine samples provided by a Public Pediatric Hospital of São Paulo, Brazil, from 1999 to 2004. The most frequent species was Candida albicans, followed by C. tropicalis, C. glabrata and C. parapsilosis. In regard to virulence, 97% of the isolates showed index 3 for proteinase and 63% index 2 for phospholipase. The most frequent killer biotypes were 511 and 888.Estudou-se 100 amostras de leveduras, isoladas de urina, provenientes de Hospital Público Infantil de São Paulo Brasil, no período de 1999-2004. A espécie mais freqüente foi Candida albicans, seguida de C. tropicalis, C. glabrata e C. parapsilosis. Em relação à virulência, 97% dos isolados apresentaram índice 3 para proteinase e, 63% índice 2 para fosfolipase. Os biótipos "killer" mais freqüentes foram o 511 e 888.

  17. Genetic and antigenic characterization of bovine viral diarrhea viruses isolated from cattle in Hokkaido, Japan.

    Science.gov (United States)

    Abe, Yuri; Tamura, Tomokazu; Torii, Shiho; Wakamori, Shiho; Nagai, Makoto; Mitsuhashi, Kazuya; Mine, Junki; Fujimoto, Yuri; Nagashima, Naofumi; Yoshino, Fumi; Sugita, Yukihiko; Nomura, Takushi; Okamatsu, Masatoshi; Kida, Hiroshi; Sakoda, Yoshihiro

    2016-01-01

    In our previous study, we genetically analyzed bovine viral diarrhea viruses (BVDVs) isolated from 2000 to 2006 in Japan and reported that subgenotype 1b viruses were predominant. In the present study, 766 BVDVs isolated from 2006 to 2014 in Hokkaido, Japan, were genetically analyzed to understand recent epidemics. Phylogenetic analysis based on nucleotide sequences of the 5'-untranslated region of viral genome revealed that 766 isolates were classified as genotype 1 (BVDV-1; 544 isolates) and genotype 2 (BVDV-2; 222). BVDV-1 isolates were further divided into BVDV-1a (93), 1b (371) and 1c (80) subgenotypes, and all BVDV-2 isolates were grouped into BVDV-2a subgenotype (222). Further comparative analysis was performed with BVDV-1a, 1b and 2a viruses isolated from 2001 to 2014. Phylogenetic analysis based on nucleotide sequences of the viral glycoprotein E2 gene, a major target of neutralizing antibodies, revealed that BVDV-1a, 1b and 2a isolates were further classified into several clusters. Cross-neutralization tests showed that BVDV-1b isolates were antigenically different from BVDV-1a isolates, and almost BVDV-1a, 1b and 2a isolates were antigenically similar among each subgenotype and each E2 cluster. Taken together, BVDV-1b viruses are still predominant, and BVDV-2a viruses have increased recently in Hokkaido, Japan. Field isolates of BVDV-1a, 1b and 2a show genetic diversity on the E2 gene with antigenic conservation among each subgenotype during the last 14 years.

  18. Isolated hepatosplenic tuberculosis

    Institute of Scientific and Technical Information of China (English)

    Vinay Kumar; Durgatosh Pandey

    2008-01-01

    BACKGROUND:Tuberculosis rarely involves the liver and spleen and when it does so, it is usually associated with disseminated disease. METHOD:We report a patient with isolated tuberculosis of the liver and spleen. RESULTS:A 50-year-old man presented with weakness and loss of weight for two months. CT scan of the abdomen showed multiple small hypodense lesions in the liver and spleen. Image-guided biopsy of liver lesion was inconclusive as it showed normal hepatocytes with interspersed lymphocytes. On laparotomy, the liver and spleen were studded with multiple small nodules. A 5-cm wedge of the liver was resected. Histopathological examination conifrmed the diagnosis of tubercular hepatitis. A detailed work-up failed to identify any other focus of tuberculosis. CONCLUSION:Although rare, tuberculosis should also be considered in the differential diagnosis for multiple nodules in the liver and spleen, along with lymphoproliferative diseases and metastatic lesions.

  19. Patients experience of source isolation

    DEFF Research Database (Denmark)

    Johansen, Kamilla; Pedersen, Didde; Kragbak, Nina

    2013-01-01

    Patients´ experience of source isolation - a literature review Title: Patients experience of source isolation – a literature review Authors: Nina Kragbak*, Didde Pedersen*, Kamilla Johansen* and Peter E. Jensen** *students, **lecturer, bachelor in science and Ph.D., at VIA University College......, Nursing education in Århus, Hedeager 2, 8200 Aarhus N, Denmark. Background: Medical treatment and care of patients with infections may include source isolation of the patient, to avoid spreading of the infection. However, isolation is a potential physiological and psychological stress factor...... of the patients perspectives of being isolated to identify areas of potential interest for developing new caring strategies to minimize the negative side effects of isolation. Methods: Literature was systematically searched in CINAHL, Nursing Reference Center, Social Care Online, SveMed+, The Cochrane Library...

  20. Isolation and the parish ministry

    OpenAIRE

    Irvine, Andrew R.

    1989-01-01

    The purpose of this thesis was to examine the concept of isolation as it occurs within the profession of ministry. Isolation, for the purpose of this thesis, is defined social-psychologically. Within the field research isolation is considered as evidenced professionally, socially and spiritually. This study utilized as its sample base 200 hundred Church of Scotland ministers (15% of total population) which provided 159 usable responses to an extensive mail survey. The mai...

  1. Protein loss during nuclear isolation

    OpenAIRE

    1983-01-01

    Cryomicrodissection makes possible the measurement of the entire in vivo protein content of the amphibian oocyte nucleus and provides a heretofore missing baseline for estimating protein loss during nuclear isolation by other methods. When oocyte nuclei are isolated into an aqueous medium, they lose 95% of their protein with a half-time of 250 s. This result implies an even more rapid loss of protein from aqueously isolated nuclei of ordinary-size cells.

  2. A hybrid base isolation system

    Energy Technology Data Exchange (ETDEWEB)

    Hart, G.C. [Univ. of California, Los Angeles, CA (United States); Lobo, R.F.; Srinivasan, M. [Hart Consultant Group, Santa Monica, CA (United States); Asher, J.W. [kpff Engineers, Santa Monica, CA (United States)

    1995-12-01

    This paper proposes a new analysis procedure for hybrid base isolation buildings when considering the displacement response of a base isolated building to wind loads. The system is considered hybrid because of the presence of viscous dampers in the building above the isolator level. The proposed analysis approach incorporates a detailed site specific wind study combined with a dynamic nonlinear analysis of the building response.

  3. Draft Genome Sequence of Thalassospira xiamenensis Strain MCCC 1A03042T

    Science.gov (United States)

    Li, Meiqing; Yang, Shuo; Lai, Qiliang

    2017-01-01

    ABSTRACT Thalassospira xiamenensis strain MCCC 1A03042T was isolated from deep-sea sediment of the Indian Ocean, and it was characterized with heavy-metal arsenic tolerance. Here, we present the draft genome of strain MCCC 1A03042T, which contains 4,786,207 bp with a G+C content of 52.6% and 4,359 protein-coding genes. PMID:28254975

  4. Effects of Bemisia tabaci (Homoptera: Aleyrodidae) Biotype B Infestation on Photosystem Ⅱ in Nicotiana tabacum%B型烟粉虱危害对烟草叶片光系统Ⅱ的影响

    Institute of Scientific and Technical Information of China (English)

    李庆亮; 谭伟; 薛明

    2012-01-01

    [目的]研究B型烟粉虱取食危害对烟草光系统Ⅱ的影响,为明确烟粉虱对寄主植物光合作用的影响机制提供依据.[方法]通过测定烟草叶片叶绿素荧光快速诱导曲线,使用JIP-test分析技术进行参数分析,研究B型烟粉虱危害烟草后对烟草的局部虫体叶和系统叶光系统Ⅱ (PSⅡ)的影响.[结果]B型烟粉虱危害烟草后虫体叶和系统叶上的最大光化学效率(φpo)和光化学性能指数(PIABS)与对照相比均明显升高(P<0.05),表明处理烟草植株的局部叶和系统叶的原初光化学反应受到较大的伤害.B型烟粉虱危害烟草后虫体叶和系统叶PSⅡ反应中心的电子传递均受阻,放氧复合体受到严重破坏.B型烟粉虱危害烟草后系统叶的单位反应中心吸收的能量(ABS/RC)和单位反应中心热耗散掉的能量(DIo/RC)增加,单位反应中心捕获的能量(TRo/RC)下降;B型烟粉虱危害的虫体叶中ABC/RC没有变化,DIo/RC增加,TRo/RC下降.B型烟粉虱危害烟草后虫体叶和系统叶的单位面积反应中心数量(RC/CS)均明显降低(P<0.05),而光系统PS Ⅱ反应中心的关闭程度(1-qP)却明显升高,分别较各自对照升高了69.83%和142.58%(P<0.05).[结论] B型烟粉虱的危害严重影响了烟草叶片的光系统Ⅱ(PSⅡ),主要是由于PSⅡ反应中心的失活和关闭以及对PSⅡ电子传递的抑制,电子传递中受抑制的位点包括放氧复合体和QA到Q8间的电子传递过程,同时B型烟粉虱危害影响了烟草叶片光系统的能量流动,且烟粉虱对烟草叶片PSⅡ的影响具有系统传导性.%[ Objective ] The objective of this study is to define the effects of Bemisia tabaci biotype B infestation on the photosystem II (PSII) in tobacco, and to reveal the mechanism of B. tabaci infestation affecting photosynthesis of host plant. [Method! Effects of B. tabaci infestation on the PSII performance in damaged leaves and systemic leaves of tobacco were

  5. Isolated Pelvic Hyperthermochemotherapeutic Perfusion -An Experimental Study on Isolating Efficacy

    Institute of Scientific and Technical Information of China (English)

    2000-01-01

    Hyperthermochemotherapeutic perfusion model through isolated pelvic vessels was developed to evaluate the leakage of hyperthermia and drugs (such as adriamycin) from the isolated pelvic circulation to systemic circulation and its associated side/toxic effects. The isolated pelvic circulation was perfused through a femoral artery catheter with hyperthermic (48 ℃ to 55 ℃) adriamycin solution (50 μg/ml) for 30 min. The efflux was drained through a femoral vein catheter. And the pelvic temperature was kept at the level of 43±0.5 ℃. The temperature of pelvic circulation was kept at 4 ℃ to 5 ℃ greater than the systemic/core temperature. The adriamycin concentration of pelvic efflux was 12 to 46 folds of that of systemic serum. The difference between them was very significant (P<0.001). As the perfusion pressure was increased, which kept lower than the mean systemic artery pressure, the leakage of the adriamycin from the isolated pelvic circulation to systemic circulation was increased, but there was no significant difference between them (P>0.05). During isolated perfusion, the systemic blood dynamics remained stable and there were no organic injuries on the important organs. It was suggested that the isolating efficacy of the modality of isolated pelvic hyperthermochemotherapeutic perfusion through vessels was rather high. The hyperthermia and drugs could be effectively limited in the isolated pelvic region with minor side effects on the systemic circulation and important organs.

  6. 生物型与骨水泥型人工股骨头置换治疗高龄股骨颈骨折%Biotype and bone cement-type artificial femoral head replacement for the treatment of femoral neck fracture in elderly patients

    Institute of Scientific and Technical Information of China (English)

    史建国; 邱南海

    2013-01-01

      BACKGROUND: With the maturity and development of artificial joint materials, processes and technology, artificial femoral head replacement has been widely used for the treatment of femoral neck fracture, especial y the elderly patients with displaced femoral neck fracture. OBJECTIVE: To observe the clinical efficacy of biotypes and cementless artificial femoral head replacement for the treatment of elderly femoral neck fracture combined with heart disease. METHODS: Thirty-five elderly femoral neck fracture patients with heart disease treated in the Department of Orthopedic Center, Tianjin Nursing Home from January 2004 to December 2009 were selected, including 16 cases of coronary heart disease combined with angina pectoris, eight cases of myocardial infarction coronary heart disease, eight cases of asymptomatic coronary heart disease and three cases of ischemic cardiomyopathy and coronary heart disease. And 18 cases were treated with biotypes artificial femoral head replacement, 17 cases were treated with cementless artificial femoral head replacement. RESULTS AND CONCLUSION: One of the 35 patients was dead in the surgery, other 34 cases were fol owed-up for 8 to 36 months. Three cases of complications occurred in surgery were belongs to cementless group, and one patient died during surgery, two cases had to drop in blood pressure and suffered from difficulty breathing in surgery, whose life characteristics returned to normal after efforts to save. In the fol ow-up process, part of the prosthesis implanted in the two cases of patients with severe osteoporosis appears sinking in the biotype group, the excel ent rate of biotype group was 89%(16/18), and the cementless group was 94%(16/17). It suggests that biotype artificial femoral head replacement is suitable for the patients with severe heart disease, while the cementless artificial femoral head replacement is suitable for osteoporosis patients.%  背景:随着人工关节材料、工艺及技术的

  7. Main: PE2FNTRNR1A [PLACE

    Lifescience Database Archive (English)

    Full Text Available PE2FNTRNR1A S000455 29-November-2004 (last modified) kehi pE2F (proximal E2F elemen...of the cell cycle; Important for regulating specific RNR1a (ribonucleotide reductase large subunit) gene exp

  8. Geometry of isolated horizons

    CERN Document Server

    Flandera, Aleš

    2016-01-01

    While the formalism of isolated horizons is known for some time, only quite recently the near horizon solution of Einstein's equations has been found in the Bondi-like coordinates by Krishnan in 2012. In this framework, the space-time is regarded as the characteristic initial value problem with the initial data given on the horizon and another null hypersurface. It is not clear, however, what initial data reproduce the simplest physically relevant black hole solution, namely that of Kerr-Newman which describes stationary, axisymmetric black hole with charge. Moreover, Krishnan's construction employs the non-twisting null geodesic congruence and the tetrad which is parallelly propagated along this congruence. While the existence of such tetrad can be easily established in general, its explicit form can be very difficult to find and, in fact it has not been provided for the Kerr-Newman metric. The goal of this thesis was to fill this gap and provide a full description of the Kerr-Newman metric in the framework ...

  9. Seismic isolation for Advanced LIGO

    CERN Document Server

    Abbott, R; Allen, G; Cowley, S; Daw, E; Debra, D; Giaime, J; Hammond, G; Hammond, M; Hardham, C; How, J; Hua, W; Johnson, W; Lantz, B; Mason, K; Mittleman, R; Nichol, J; Richman, S; Rollins, J; Shoemaker, D; Stapfer, G; Stebbins, R

    2002-01-01

    The baseline design concept for a seismic isolation component of the proposed 'Advanced LIGO' detector upgrade has been developed with proof-of-principle experiments and computer models. It consists of a two-stage in-vacuum active isolation platform that is supported by an external hydraulic actuation stage. Construction is underway for prototype testing of a full-scale preliminary design.

  10. Improved Active Vibration Isolation Systems

    Institute of Scientific and Technical Information of China (English)

    2007-01-01

    The