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Sample records for biotype 1a isolate

  1. Clinical isolates of Yersinia enterocolitica Biotype 1A represent two phylogenetic lineages with differing pathogenicity-related properties

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    Sihvonen Leila M

    2012-09-01

    Full Text Available Abstract Background Y. enterocolitica biotype (BT 1A strains are often isolated from human clinical samples but their contribution to disease has remained a controversial topic. Variation and the population structure among the clinical Y. enterocolitica BT 1A isolates have been poorly characterized. We used multi-locus sequence typing (MLST, 16S rRNA gene sequencing, PCR for ystA and ystB, lipopolysaccharide analysis, phage typing, human serum complement killing assay and analysis of the symptoms of the patients to characterize 298 clinical Y. enterocolitica BT 1A isolates in order to evaluate their relatedness and pathogenic potential. Results A subset of 71 BT 1A strains, selected based on their varying LPS patterns, were subjected to detailed genetic analyses. The MLST on seven house-keeping genes (adk, argA, aroA, glnA, gyrB, thrA, trpE conducted on 43 of the strains discriminated them into 39 MLST-types. By Bayesian analysis of the population structure (BAPS the strains clustered conclusively into two distinct lineages, i.e. Genetic groups 1 and 2. The strains of Genetic group 1 were more closely related (97% similarity to the pathogenic bio/serotype 4/O:3 strains than Genetic group 2 strains (95% similarity. Further comparison of the 16S rRNA genes of the BT 1A strains indicated that altogether 17 of the 71 strains belong to Genetic group 2. On the 16S rRNA analysis, these 17 strains were only 98% similar to the previously identified subspecies of Y. enterocolitica. The strains of Genetic group 2 were uniform in their pathogenecity-related properties: they lacked the ystB gene, belonged to the same LPS subtype or were of rough type, were all resistant to the five tested yersiniophages, were largely resistant to serum complement and did not ferment fucose. The 54 strains in Genetic group 1 showed much more variation in these properties. The most commonly detected LPS types were similar to the LPS types of reference strains with serotypes O

  2. Flagellin genes of Yersinia enterocolitica biotype 1A: playground of evolution towards novel flagellin functions

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    Daniela Lepka

    2010-12-01

    Full Text Available Yersinia enterocolitica strain 8081, representing the high-pathogenic biotype 1B, harbours three flagellin genes arranged in tandem in the order fliC3, fliC, fliC2. The genes are organized monocistronic but coordinately expressed under the control of the flagellar sigma factor. No sequence data is available on flagellins of low-pathogenic Y. enterocolitica biotypes 2-5 and of biotype 1A strains, appearing non-pathogenic in the mouse infection model. We sequenced the flagellin genes of ten biotype 1A and biotype 4 isolates, respectively. While we could not identify any sequence polymorphism among flagellin genes of biotype 4 isolates, we found that biotype 1A strains harbour three variable flagellin genes. Moreover, three biotype 1A isolates exhibited a rearranged flagellin gene order and at least one rearranged flagellin gene was apparently acquired by horizontal gene transfer. The variability of flagellin genes seems to mirror evolution towards novel flagellin functions. By contrast, strictly conserved flagellins of biotype 4 isolates point at a strong selection pressure such as expected to be imposed by an important function in the context of infection.

  3. Biotypes of Gardnerella vaginalis isolated from urinary tract.

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    González-Pedraza Avilés, A; Ortíz-Zaragoza, M C; Inzunza-Montiel, A E; Ponce-Rosas, E R

    1996-01-01

    A modified scheme is proposed for biotyping Gardnerella vaginalis isolated from urinary tract of symptomatic and asymptomatic women based on detection of hippurate hydrolysis, beta-galactosidase (ONPG) and lipase, and fermentation of arabinose, galactose and xylose. Thirty biotypes were found among 73 strains. The distribution of biotypes was similar in both populations but the biotypes 1H, 5G and 7G were found more frequently in women without symptoms of urinary tract infection.

  4. Biotyping of thermophilic Campylobacter spp. isolated from poultry in and around Anand city, Gujarat, India

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    R. S. Tayde

    2014-05-01

    Full Text Available Aim: To study the prevalence of different biotypes of thermophilic Campylobacter spp. in the study area. Materials and Methods: A total of 150 samples comprising 90 chicken and 60 caecal content were collected from retail meat market and processed for isolation of Campylobacter spp. 52 Campylobacter isolates obtained from raw poultry meat (6 and caecal content (46 were subjected to biotyping using Lior's biotyping scheme. Results: Among the 52 Campylobacter isolates studied, 60.46 % isolates were identified as Campylobacter jejuni Biotype I and 39.53% were C. jejuni Biotype II, whereas 83.33 % were C. coli Biotype I and 16.66 % C. coli Biotype II. No other biotypes were identified. Conclusions: The present study revealed that C. jejuni Biotype I was more prevalent than Biotype II whereas in case of C. coli, Biotype I was more prevalent than Biotype II providing basis for further epidemiological study.

  5. Biotypes and virulence factors of Gardnerella vaginalis isolated from cases of bacterial vaginosis

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    Udayalaxmi, J.; Bhat, G. K.; S Kotigadde

    2011-01-01

    The present study was conducted to correlate the biotypes of Gardnerella vaginalis strains isolated from cases of bacterial vaginosis and their virulence factors. Thirty-two strains of G. vaginalis isolated from cases of bacterial vaginosis were biotyped. Adherence to vaginal epithelial cells, biofilm production, surface hydrophobicity, phospholipase C and protease activity were tested on these isolates. Biotype 1 was the most prevalent (8; 25%), followed by biotype 2 (7; 21.9%) and biotypes ...

  6. Biotypes and virulence factors of Gardnerella vaginalis isolated from cases of bacterial vaginosis.

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    Udayalaxmi, J; Bhat, G K; Kotigadde, S

    2011-01-01

    The present study was conducted to correlate the biotypes of Gardnerella vaginalis strains isolated from cases of bacterial vaginosis and their virulence factors. Thirty-two strains of G. vaginalis isolated from cases of bacterial vaginosis were biotyped. Adherence to vaginal epithelial cells, biofilm production, surface hydrophobicity, phospholipase C and protease activity were tested on these isolates. Biotype 1 was the most prevalent (8; 25%), followed by biotype 2 (7; 21.9%) and biotypes 5 and 8 (5; 15.6%). We did not find any statistical correlation between G. vaginalis biotypes and its virulence factors. Virulence factors expressed by G. vaginalis were not associated with a single biotype.

  7. Biotypes and virulence factors of Gardnerella vaginalis isolated from cases of bacterial vaginosis

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    J Udayalaxmi

    2011-01-01

    Full Text Available The present study was conducted to correlate the biotypes of Gardnerella vaginalis strains isolated from cases of bacterial vaginosis and their virulence factors. Thirty-two strains of G. vaginalis isolated from cases of bacterial vaginosis were biotyped. Adherence to vaginal epithelial cells, biofilm production, surface hydrophobicity, phospholipase C and protease activity were tested on these isolates. Biotype 1 was the most prevalent (8; 25%, followed by biotype 2 (7; 21.9% and biotypes 5 and 8 (5; 15.6%. We did not find any statistical correlation between G. vaginalis biotypes and its virulence factors. Virulence factors expressed by G. vaginalis were not associated with a single biotype.

  8. Yersinia enterocolitica in sheep - a high frequency of biotype 1A

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    Söderqvist Karin

    2012-06-01

    Full Text Available Abstract Background Pigs are regarded as the main reservoir for human pathogenic Yersinia enterocolitica, which is dominated by bioserotype 4/O:3. Other animals, including sheep, have occasionally been reported as carriers of pathogenic strains of Y. enterocolitica. To our knowledge, this is the first study performed in the Nordic countries in which the presence of Y. enterocolitica in sheep is investigated. Methods Tonsils and faecal samples collected from sheep slaughtered on the island Gotland (Sweden from September 2010 through January 2011 were analysed for presence of Y. enterocolitica. In an attempt to maximize recovery, several cultural strategies were applied. Various non-selective media were used and different temperatures and durations of the enrichment were applied before subculturing on Cefsulodin Irgasan Novobiocin (CIN agar. Presumptive Y. enterocolitica colonies were subjected to urease, API 20E and agglutination test. Yersinia enterocolitica isolates were biotyped, serotyped, and tested for pathogenicity using a TaqMan PCR directed towards the ail-gene that is associated with human pathogenic strains of Y. enterocolitica. Results The samples collected from 99 sheep yielded 567 presumptive Y. enterocolitica colonies. Eighty urease positive isolates, from 35 sheep, were identified as Y. enterocolitica by API 20E. Thirty-four of 35 further subtyped Y. enterocolitica isolates, all from faecal samples, belonged to biotype 1A serotype O:5, O:6. O:13,7 and O:10. One strain was Yersinia mollaretii serotype O:62. No human pathogenic strains of Y. enterocolitica were found in the investigated sheep. Other species identified were Y. kristensenii (n = 4, Y. frederiksenii/intermedia (n = 3, Providencia rettgeri (n = 2, Serratia marcescens (n = 1 and Raoultella ornithinolytica (n = 1. Conclusions This study does not support the hypothesis that sheep play an important role in transmission of the known human pathogenic Y

  9. Yersinia ruckeri biotype 2 isolates from mainland Europe and the UK likely represent different clonal groups

    DEFF Research Database (Denmark)

    Wheeler, Richard W.; Davies, Robert L.; Dalsgaard, Inger;

    2009-01-01

    the restriction enzyme NotI. Serotype O1 isolates responsible for ERM in rainbow trout in both the US and Europe, and including biotype 2 isolates, represented a distinct subgroup of similar pulsotypes. Biotype 2 isolates, responsible for outbreaks of the disease in rainbow trout in the UK, Denmark and Spain, had...... their likely origins and relationships, a geographically and temporally diverse collection of isolates were characterised by serotyping, biotyping, pulsed-field gel electrophoresis (PFGE) and outer membrane protein (OMP) profiling. A total of 44 pulsotypes were identified from 160 isolates by PFGE, using...

  10. Serological characterization of Actinobacillus pleuropneumoniae biotype 2 strains isolated from pigs in two Danish herds

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    Nielsen, R.; Andresen, Lars Ole; Plambeck, Tamara;

    1997-01-01

    Eight Actinobacillus pleuropneumoniae biotype 2 strains were isolated in pure culture from lungs of pigs originating from two Danish herds with growing and finishing pigs. The antigenic properties were studied by indirect haemagglutination (IHA) and immunodiffusion (ID) tests using soluble surface...... antigens and by enzyme-linked immunosorbent assays (ELISA) using capsular enriched fractions and LPS. In all tests the strains proved antigenically homogeneous and serologically distinct from the known biotype 1 and 2 serotypes. Thus, the strains represent a new serotype which is provisionally proposed...... as biotype 2 serotype 14....

  11. Importance of isolation and biotypization of Gardnerella vaginalis in diagnosis of bacterial vaginosis.

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    Numanović, Fatima; Hukić, Mirsada; Nurkić, Mahmud; Gegić, Merima; Delibegović, Zineta; Imamović, Alma; Pasić, Selma

    2008-08-01

    The natural habitat of Gardnerella vaginalis is a vagina since it could be located among 69% of women who have no signs of vaginal infection and in the vagina of as many as 13.5% girls. G. vaginalis is almost certainly identified among women diagnosed with bacterial vaginosis as well as in the urethra of their sexual partner. The increase in prevalence and concentration of G. vaginalis among patients diagnosed with this syndrome confirms that G. vaginalis plays a significant role in its pathogenesis. In our research, based on Amsel criteria for three or more clinical signs of bacterial vaginosis, it was diagnosed in 20.5% of women with subjective problems of vaginal infection, and in 48.80% of women with subjective symptoms characteristic of this disease. G. vaginalis was isolated from vaginal secretion of women without clinical signs characteristic of bacterial vaginosis. In 2.58% of cases it was solitary, while in 1.28% it was found in combination with other aerobic and anaerobic bacteria and, in 1.28% women combined with Candida albicans. The isolation of G. vaginalis was significantly increased (pbiotype of G. vaginalis, different from a source biotype or as a consequence of wrong treatment. Following Piot biotype scheme, biotypes 2., 3. and 7. G. vaginalis are significantly more often isolated from women who suffer from bacterial vaginosis. Biotype 7. G. vaginalis, isolated from the group of women without clinical signs of bacterial vaginosis, accounted for 2.58% cases. Following Benit biotype scheme, biotypes IVa, IVc and IIc were identified in 12.90% cases, while biotypes IIIa, IIa, Ia, IVb, IIb were found in 6.45% cases. Lipase-positive isolates of G. vaginalis were significantly more frequently accompanied by the syndrome of bacterial vaginosis.

  12. Biotypes of Gardnerella vaginalis isolated from non-specific vaginitis patients in Bombay.

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    Pandit, D V; Barve, S M; Deodhar, L P

    1989-11-01

    The incidence and prevalent biotypes of G. vaginalis in patients with non-specific vaginitis from Bombay, was studied. Of 300 patients screened, 105 were diagnosed to have nonspecific vaginitis (NSV). G. vaginalis was isolated from 71 per cent patients with NSV; 34.6 and 29.3 per cent G. vaginalis were belonging to biotypes 5 and 1 respectively. In 55 per cent patient, G. vaginalis was associated with anaerobes. None of the isolated strains of G. vaginalis was sensitive to 5 micrograms metronidazole disc whereas 93 per cent of the strains were sensitive to 50 micrograms metronidazole disc.

  13. The Prevalence of Brucella Biotypes Isolated From Sterile Body Fluids of Patients With Brucellosis in Kashan, Iran in 2013

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    Erami

    2016-07-01

    Full Text Available Background Brucella species are classified based on their pathogenic and genetic properties and hosts. Considering the significance of identifying different biotypes of Brucella from the epidemiological point of view and lack of such information in the city of Kashan, Iran. Objectives This study was designed to determine the biotypes and strains of Brucella isolated from patients with brucellosis. Methods This was a descriptive study of 206 samples obtained from patients with suspected brucellosis in 2013 in Kashan. BACTEC 9050 culture media was employed to test the samples. Suspected colonies of Brucella were identified through morphology, staining, and biochemical tests. The biotypes were identified by the Razi Research Institute. Lysis tests with the Tbilisi (Tb phage were performed, the need for CO2, SH2 production, sensitivity to basic fuchsin and thionin stains, and the reaction of all the samples to specific antiserum A and M (monospecific were tested. Results Fifty (24.3% of the 206 samples were culture positive. SH3 production was not detected in any of the isolates, and none of the isolated strains required CO2. The results of the sensitivity test to basic fuchsin and thionin staining and specific agglutination and phage lysis (phage typing tests indicated that all the isolated strains were biotype 1 B. melitansis. Conclusions The cause of human brucellosis in Kashan and its suburbs was biotype 1 B. melitensis. The identification of various biotypes of Brucella is important. Similar studies should be performed to detect the presence of new biotypes originating from neighboring countries.

  14. Haemophilus influenzae biotype VII.

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    Gratten, M

    1983-01-01

    A hitherto unreported biotype of Haemophilus influenzae is described. The isolate is noncapsulate and fails to decarboxylate ornithine or hydrolyze urea but is a strong indole producer. Its frequency is low. It is suggested that this newly recognized biotype of H. influenzae be designated biotype VII.

  15. Biotyping and genotyping (MLVA16 of Brucella abortus isolated from cattle in Brazil, 1977 to 2008.

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    Sílvia Minharro

    Full Text Available Brucellosis is a worldwide distributed zoonosis that causes important economic losses to animal production. In Brazil, information on the distribution of biovars and genotypes of Brucella spp. is scarce or unavailable. This study aimed (i to biotype and genotype 137 Brazilian cattle isolates (from 1977 to 2008 of B. abortus and (ii to analyze their distribution. B. abortus biovars 1, 2 and 3 (subgroup 3b were confirmed and biovars 4 and 6 were first described in Brazil. Genotyping by the panel 1 revealed two groups, one clustering around genotype 40 and another around genotype 28. Panels 2A and 2B disclosed a high diversity among Brazilian B. abortus strains. Eighty-nine genotypes were found by MLVA16. MLVA16 panel 1 and 2 showed geographic clustering of some genotypes. Biotyping and MLVA16 genotyping of Brazilian B. abortus isolates were useful to better understand the epidemiology of bovine brucellosis in the region.

  16. THE STUDY OF ENTEROTOXIGENICITY OF THE BIOTYPE 1A YERSINIA ENTEROCOLITICA

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    E. A. Bogumilchik

    2011-01-01

    Full Text Available Abstract. The representatives of Y. enterocolitica biotype 1А which are considered as nonpathogenic microorganisms were tested for production of the thermostable enterotoxin YST B (Yersinia Stable Toxin. This toxin is characterized by strong toxic action and it can bring on diarrhea in human and animals. The chromosome gene of thermostable enterotoxin ystB was detected by PCR in 87.1% out of 116 studied strains of different origin and territorial isolation. To determine toxin production in vitro the studied strains cultivated in various conditions: in 26°C and 37°С in usual culture medium and in 37°С in the medium corresponded to the content of intestine. In part of the studied strains the toxin production was revealed on the model of newborn mice in both temperature regimes of cultivation 26°С and 37°С. The study of toxin production in representatives of Y. enterocolitica biotype 1А showed their possible role as etiological agents of diarrhea.

  17. Isolation and identification of Brucella suis biotype 2 from epididymal puncture performed on a boar affected with brucellosis

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    Rogožarski Dragan

    2009-01-01

    Full Text Available The causal agent of swine brucellosis is Brucella suis. Within the scope of the kinds of Brucella suis, there are five biotypes, but only biotypes 1, 2 and 3 lead to swine infections. Human infections with Brucella suis biotype 2 are rarely registered. Swine brucellosis is widespread all over the world. It has been noted that the incidence of swine population infected with Brucella suis in Western Europe has been increasing during the recent years. The goal of this project was to isolate, identify and typify the causal agent from epididymal puncture performed on a boar with conditions suspicious of brucellosis, using standard microbiological methods. The results of the research show that Brucella suis biotype 2 can be successfully isolated and identified from a sample obtained by means of epididymal puncture of live animals. Therefore, epididymal puncture gives us a certain, reliable and important sample derived from a live animal for a direct diagnostic of boar brucellosis. The above mentioned first isolate of Brucella suis biotype 2 epididymal puncture, has been marked as K-1.

  18. [Biotypes and antibiotic resistance patterns of Gardnerella vaginalis strains isolated from healthy women and women with bacterial vaginosis].

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    Tosun, Ilknur; Alpay Karaoğlu, Sengül; Ciftçi, Hasan; Buruk, Celal Kurtuluş; Aydin, Faruk; Kiliç, Ali Osman; Ertürk, Murat

    2007-01-01

    As Gardnerella vaginalis is accepted as a member of normal vaginal flora, it is one of the dominant species which has been related to bacterial vaginosis (BV). The aim of this study was to determine the isolation rate, biotypes and antibiotic resistance patterns of G.vaginalis from the vaginal swab samples of 408 women who were admitted to the outpatient clinics of Family Planning Center. Hippurate hydrolysis, lipase and beta-galactosidase tests were performed for biotyping the isolates, and agar dilution (for metronidazole) and disk diffusion (for clindamycin) tests were used for the detection of antibiotic resistance patterns. As a result, by Nugent's BV scoring protocol, 122 (29.9%), 20 (29.4%), 137 (33.6%), and 18 (4.4%) of the women were diagnosed as BV, intermediate form, normal vaginal flora (NVF) and mycotic vaginosis, respectively. The overall isolation rate of G.vaginalis was found as 23% (94/408). Of them, 56.4% (53/94) and 8.5% (8/94) were isolated from samples of BV cases and subjects with NVF, respectively, and the difference was statistically significant (pbiotyping results showed that the most frequently detected types were biotype 1 (44%), 5 (20%) and 4 (18%). There was no statistically significant difference between the biotype distribution of BV patients and the subjects who have NVF (p=0.687). The results of antibiotic susceptibility tests indicated that 70% and 53% of the isolates were resistant to metronidazole and clindamycin, respectively. It was of interest that MIC values for metronidazole was > or =128 microg/ml in 57% of resistant strains. The data of this study has emphasized that the metronidazole resistance is very high in our population, and the large scale studies are needed to clarify the relationship between BV and G.vaginalis biotypes, which can be found in the normal vaginal flora.

  19. Biotypes of Gardnerella vaginalis.

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    Piot, P; Van Dyck, E; Peeters, M; Hale, J; Totten, P A; Holmes, K K

    1984-10-01

    A simple and reproducible scheme for identifying biotypes of Gardnerella vaginalis has been developed, based on reactions for lipase, hippurate hydrolysis, and beta-galactosidase. Among a total of 359 strains tested, eight biotypes were observed, the most common ones being types 1 (beta-galactosidase positive, lipase positive, hippurate positive), 2 (beta-galactosidase negative, lipase positive, hippurate positive), and 5 (beta-galactosidase negative, lipase negative, hippurate positive). The distribution in biotypes was similar among isolates from Antwerp, Seattle, and Nairobi. There were no differences in biotypes between strains isolated from patients with and without bacterial vaginosis (nonspecific vaginitis). Up to 14% of women with bacterial vaginosis harbored at least two different biotypes of G. vaginalis in the vagina. G. vaginalis strains isolated before and after treatment for bacterial vaginosis belonged to identical biotypes when the time interval between two specimens was less than 1 week. Similarly, G. vaginalis isolates from the vaginas of women with bacterial vaginosis and from the urethras of their male sex partners belonged to identical biotypes when strains were isolated within the same 24-h period from both partners (P less than 0.005).

  20. Comparative Genomic Analysis of Clinical and Environmental Vibrio Vulnificus Isolates Revealed Biotype 3 Evolutionary Relationships

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    Yael eKotton

    2015-01-01

    Full Text Available In 1996 a common-source outbreak of severe soft tissue and bloodstream infections erupted among Israeli fish farmers and fish consumers due to changes in fish marketing policies. The causative pathogen was a new strain of Vibrio vulnificus, named biotype 3, which displayed a unique biochemical and genotypic profile. Initial observations suggested that the pathogen erupted as a result of genetic recombination between two distinct populations. We applied a whole genome shotgun sequencing approach using several V. vulnificus strains from Israel in order to study the pan genome of V. vulnificus and determine the phylogenetic relationship of biotype 3 with existing populations. The core genome of V. vulnificus based on 16 draft and complete genomes consisted of 3068 genes, representing between 59% and 78% of the whole genome of 16 strains. The accessory genome varied in size from 781 kbp to 2044 kbp. Phylogenetic analysis based on whole, core, and accessory genomes displayed similar clustering patterns with two main clusters, clinical (C and environmental (E, all biotype 3 strains formed a distinct group within the E cluster. Annotation of accessory genomic regions found in biotype 3 strains and absent from the core genome yielded 1732 genes, of which the vast majority encoded hypothetical proteins, phage-related proteins, and mobile element proteins. A total of 1916 proteins (including 713 hypothetical proteins were present in all human pathogenic strains (both biotype 3 and non-biotype 3 and absent from the environmental strains. Clustering analysis of the non-hypothetical proteins revealed 148 protein clusters shared by all human pathogenic strains; these included transcriptional regulators, arylsulfatases, methyl-accepting chemotaxis proteins, acetyltransferases, GGDEF family proteins, transposases, type IV secretory system (T4SS proteins, and integrases. Our study showed that V. vulnificus biotype 3 evolved from environmental populations and

  1. Application of fluorescent amplified fragment length polymorphism for comparison of human and animal isolates of Yersinia enterocolitica

    DEFF Research Database (Denmark)

    Fearnley, C.; On, S.L.W.; Kokotovic, Branko;

    2005-01-01

    to their biotype, with strains dividing into two distinct clusters: cluster A, comprising largely the putatively pathogenic biotypes (BT2 to -4), and cluster B, comprising the putatively nonpathogenic biotype 1A strains and a single BT1B isolate. Within these two clusters, subclusters formed largely on the basis...... questions about the relationship between virulence potential and biotype....

  2. Pasteurella haemolytica bacteriophage: identification, partial characterization, and relationship of temperate bacteriophages from isolates of Pasteurella haemolytica (biotype A, serotype 1)

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    Richards, A.B.; Renshaw, H.W.; Sneed, L.W.

    1985-05-01

    Pasteurella haemolytica (biotype A, serotype 1) isolates (n = 15) from the upper respiratory tract of clinically normal cattle, as well as from lung lesions from cases of fatal bovine pasteurellosis, were examined for the presence of bacteriophage after irradiation with UV light. Treatment of all P haemolytica isolates with UV irradiation resulted in lysis of bacteria due to the induction of vegetative development of bacteriophages. The extent of growth inhibition and bacterial lysis in irradiated cultures was UV dose-dependent. Bacterial cultures exposed to UV light for 20 s reached peak culture density between 60 and 70 minutes after irradiation; thereafter, culture density declined rapidly, so that by 120 minutes, it was approximately 60% of the original value. When examined ultrastructurally, lytic cultures from each isolate revealed bacteriophages with an overall length of approximately 200 nm and that appeared to have a head with icosahedral symmetry and a contractile tail. Cell-free filtrate from each noninduced bacterial isolate was inoculated onto the other bacterial isolates in a cross-culture sensitivity assay for the presence of phages lytic for the host bacterial isolates. Zones of lysis (plaques) did not develop when bacterial lawns grown from the different isolates were inoculated with filtrates from the heterologous isolates.

  3. Haemophilus influenzae biotype VIII.

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    Sottnek, F O; Albritton, W L

    1984-01-01

    Six Haemophilus influenzae strains could not be classified as biotypes I through VII. The strains were indole, urease, and ornithine decarboxylase negative. We propose that they be classified as biotype VIII, a previously unreported biotype.

  4. Phenotypic and genetic characteristics of Vibrio cholerae O1 carrying Haitian ctxB and attributes of classical and El Tor biotypes isolated from Silvassa, India.

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    Das, Moon Moon; Bhotra, Tilothama; Zala, Dolatsinh; Singh, Durg Vijai

    2016-08-01

    Vibrio cholerae O1 biotype El Tor, the causative agent of the seventh pandemic, has recently been replaced by strains carrying classical and Haitian ctxB in India, Haiti and other parts of the world. We conducted phenotypic and genetic tests to characterize V. cholerae O1 isolated between 2012 and 2014 from Silvassa, India, to examine the presence of virulence and regulatory genes, seventh pandemic marker, ctxB type and biofilm formation and to study genomic diversity. Of the 59 V. cholerae O1, eight isolates belong to El Tor prototype, one to classical prototype and the remaining isolates have attributes of both classical and El Tor biotypes. PCR and ctxB gene sequencing revealed the presence of classical ctxB in four strains and Haitian ctxB in 55 isolates; indicating that isolates were either an El Tor or hybrid variant. All isolates carried virulence, regulatory, adherence, Vibrio seventh pandemic pathogenicity island I and seventh pandemic group-specific marker VC2346, in addition to tcpAET and rstRET, the features of seventh pandemic strains, and produced cholera toxin and biofilm. PFGE analysis showed that the majority of isolates are clonal and belong to fingerprint pattern A; however, pattern B is unrelated and patterns C and D are distinct, suggesting considerable diversity in the genomic content among them. These data thus show that isolates from Silvassa are genetically diverse and that Haitian ctxB and hybrid phenotypes are undergoing global dissemination.

  5. Phenotypic and genetic characteristics of Vibrio cholerae O1 carrying Haitian ctxB and attributes of classical and El Tor biotypes isolated from Silvassa, India.

    Science.gov (United States)

    Das, Moon Moon; Bhotra, Tilothama; Zala, Dolatsinh; Singh, Durg Vijai

    2016-08-01

    Vibrio cholerae O1 biotype El Tor, the causative agent of the seventh pandemic, has recently been replaced by strains carrying classical and Haitian ctxB in India, Haiti and other parts of the world. We conducted phenotypic and genetic tests to characterize V. cholerae O1 isolated between 2012 and 2014 from Silvassa, India, to examine the presence of virulence and regulatory genes, seventh pandemic marker, ctxB type and biofilm formation and to study genomic diversity. Of the 59 V. cholerae O1, eight isolates belong to El Tor prototype, one to classical prototype and the remaining isolates have attributes of both classical and El Tor biotypes. PCR and ctxB gene sequencing revealed the presence of classical ctxB in four strains and Haitian ctxB in 55 isolates; indicating that isolates were either an El Tor or hybrid variant. All isolates carried virulence, regulatory, adherence, Vibrio seventh pandemic pathogenicity island I and seventh pandemic group-specific marker VC2346, in addition to tcpAET and rstRET, the features of seventh pandemic strains, and produced cholera toxin and biofilm. PFGE analysis showed that the majority of isolates are clonal and belong to fingerprint pattern A; however, pattern B is unrelated and patterns C and D are distinct, suggesting considerable diversity in the genomic content among them. These data thus show that isolates from Silvassa are genetically diverse and that Haitian ctxB and hybrid phenotypes are undergoing global dissemination. PMID:27255911

  6. [Gardnerella vaginalis biotypes: modification of a proposed system].

    Science.gov (United States)

    Pedraza-Avilés, A G; Inzunza-Montiel, A E; Ortíz-Zaragoza, M C; Morales-Espinosa, M R; Ponce-Rosas, E R

    1995-01-01

    A modified scheme is proposed for biotyping Gardnerella vaginalis based on detection of hippurate hydrolysis, beta-galactosidase (ONPG) and lipase, and fermentation of arabinose, galactose and xylose. Thirty three biotypes were found among 140 strains from women with and without bacterial vaginosis (non-specific vaginitis). The distribution of biotypes were found to be significantly different, being more predominant the biotypes 1A; 5G; 7A; 7D and 7G in women with vaginosis and the biotypes 5G and 6H in women without vaginosis. These data suggest that some biotypes of Gardnerella vaginalis are associated with bacterial vaginosis.

  7. Isolation and Identification of Spoilage Yeasts in Wine Samples by MALDI-TOF MS Biotyper

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    Attila Kántor

    2015-05-01

    Full Text Available Many genera and species of microorganisms can be found in grape musts and wines at various times during the winemaking process. For instance, Saccharomyces, Brettanomyces, and Pediococcus can be found together in wine. There are many species of yeast involved in wine spoilage during storage. Aim of this study was to isolate the spoilage yeasts from wine samples with using special selective agar media and identified on species level by Matrix-Assisted Laser Desorption/Ionization-Time of Fly Mass Spectrometry (MALDI-TOF MS. Six red wines used in this study. We identified 10 yeast species from 152 isolates. The most common species in wine samples was Saccharomyces cerevisiae. We also identified four Candida species, two Zygosaccharomyces species and one species from genus Rhodotorula, Saccharomycodes and Dekkera.

  8. New, extended biotyping scheme for Campylobacter jejuni, Campylobacter coli, and "Campylobacter laridis".

    OpenAIRE

    Lior, H

    1984-01-01

    A biotyping scheme using improved media and methods for the detection of hippurate hydrolysis, rapid H2S production, and DNA hydrolysis was applied to 1,826 cultures of Campylobacter jejuni, Campylobacter coli and "Campylobacter laridis" isolates from human and nonhuman sources. Four biotypes were identified among C. jejuni: 57.3% of the isolates belonged to biotype I; 36.0%, to biotype II; 4.0%, to biotype III; and 2.7%, to biotype IV. C. coli organisms were differentiated into biotype I (67...

  9. Role of iron, capsule, and toxins in the pathogenicity of Vibrio vulnificus biotype 2 for mice.

    OpenAIRE

    Amaro, C.; Biosca, E G; Fouz, B; Toranzo, A E; Garay, E.

    1994-01-01

    The virulence mechanisms of Vibrio vulnificus biotype 2 have been studied and compared with those of biotype 1 in mice as the experimental animals. Biotype 2 isolates from European eels were as virulent for mice as biotype 1 strains (50% lethal dose, about 10(5) CFU per mouse); a septicemic infection developed in less than 24 h. These strains had several properties in common with biotype 1 organisms including capsule expression, uptake of various iron sources, and production of exoproteins, w...

  10. Identificación mediante biotipos y perfiles proteicos de Campylobacter aislados de perros Identification of Campylobacters isolated from dogs by using biotypes and protein electrophoretic patterns

    Directory of Open Access Journals (Sweden)

    G. GIACOBONI

    1999-01-01

    Full Text Available Se estudiaron 260 muestras fecales obtenidas por hisopado rectal atendidos en la Facultad de Ciencias Veterinarias de la Universidad Nacional de La Plata. Para el aislamiento de Campylobacter se utilizó caldo Preston de enriquecimiento, incubado a 43°C durante 12 h en microaerofilia y siembra en agar Skirrow incubado en iguales condiciones por 48 h. La identificación de especie se realizó por los métodos convencionales, la biotipificación por el método de Lior y los perfiles proteicos se determinaron en geles de poliacrilamida bajo condiciones de reducción. La prevalencia de Campylobacter termotolerantes fue de 7.3%, resultando 19 cepas identificadas como C. jejuni biotipo II. De éstas, 15 fueron sometidas a electroforesis, utilizándose la cepa humana 1522 como referencia. Los perfiles proteicos obtenidos de las cepas fueron similares y presentaron un número de 30 bandas aproximadamente. Todas las cepas compartieron las bandas del polipéptido mayor de 40-46 kD. Las diferencias se observaron en la carencia de algunas bandas o en su movilidad entre las de 40 y 50 kD. El hecho de que la electroforesis de proteína haya demostrado heterogeneidad entre cepas de una misma especie y biotipo, reafirma su importancia como método de discriminación epidemiológicaTwo hundred and sixty faecal samples obtained with rectal swabs from dogs were studied for Campylobacter isolation. The samples were placed on Preston broth and incubated at 43° C for 12 h under a microaerophilic atmosphere. Then, they were seeded on Skirrow agar and incubated under the same conditions for 48 h. Campylobacter species were identified by conventional methods (morphological, biochemical and cultural test, Lior's biotypes and protein profiles were examined by polyacrylamide gel electrophoresis, under reducing conditions. The prevalence of thermo-tolerant Campylobacter species was 7.3%. Fifteen out of 19 Campylobacter jejuni biotype II isolates were used in

  11. Identificación y tipificación de biotipos y serotipos de Yersinia enterocolitica Identification and typing of Yersinia enterocolitica biotypes and serotypes isolated

    Directory of Open Access Journals (Sweden)

    Paulino Elizalde Castañeda

    2001-08-01

    Full Text Available OBJETIVO: Conocer la existencia de Yersinia enterocolitica en suínos visiblemente sanos y sacrificados para el consumo humano. MÉTODOS: Fueron estudiadas 100 muestras de tejido linfático obtenidas en el momento del sacrifício, en un matadero del Estado de México. Fueron realizados muestreos pilotos de 20 casos, de los cuales 20% fueron positivos, permitiendo obtener una muestra estudiada (n=100. Las muestras colectadas de tejido linfático fueron acondicionadas para el aislamiento de Yersinia enterocolitica en caldo de Rappaport y en medio de cultivo de Salmonella-Shigella y MacConkey. Las identificaciones fueron efectuadas por medio de pruebas bioquímicas y serológicas, utilizándose en el caso los antisueros O:3, O:8 y O:9 para la biotipificación correspondiente. RESULTADOS: Fueron obtenidos 22 aislamientos tipificándose 8 serotipos pertenecientes al O:3 y 8 al O:9 correspondientes al biotipo 1; y, en 6 muestras no fue posible la serotipificación. No se encontró en el total de los aislados el serotipo O:8. CONCLUSIONES: En base en la metodología, se registró la presencia de Y. enterocolitica y sus serogrupos en tejido linfático de porcinos por la primera vez en México; esto es importante porque el patógeno y sus serotipos aislados están comprometidos con mayor frecuencia con problemas de salud pública.OBJECTIVE: To assess the presence of Yersinia enterocolitica in otherwise healthy pigs slaughtered for human consumption. METHODS: One hundred pharyngeal tonsils were sampled in a slaughterhouse in the state of Mexico. The minimum sample size (n=100 was calculated based on a preliminary sample of 20 cases, which had 20% positive cases. The collected tonsil samples were inoculated in Rappaport broth, and Salmonella-Shigella and McConkey media. The biotyping identification process was based on biochemical and serological tests using O:3, O:8 and O:9 antisera. RESULTS: Twenty-two isolates were obtained. Most were biotype 1 (8 cases

  12. Identification of DNA Sequences Specific for Vibrio vulnificus Biotype 2 Strains by Suppression Subtractive Hybridization

    OpenAIRE

    Lee, Chung-Te; Amaro, Carmen; Sanjuán, Eva; Hor, Lien-I

    2005-01-01

    Vibrio vulnificus can be divided into three biotypes, and only biotype 2, which is further divided into serovars, contains eel-virulent strains. We compared the genomic DNA of a biotype 2 serovar E isolate (tester) with the genomic DNAs of three biotype 1 strains by suppression subtractive hybridization and then tested the distribution of the tester-specific DNA sequences in a wide collection of bacterial strains. In this way we identified three plasmid-borne DNA sequences that were specific ...

  13. Biotypes of Gardnerella vaginalis.

    OpenAIRE

    Piot, P; Van Dyck, E; Peeters, M; Hale, J.; Totten, P A; Holmes, K K

    1984-01-01

    A simple and reproducible scheme for identifying biotypes of Gardnerella vaginalis has been developed, based on reactions for lipase, hippurate hydrolysis, and beta-galactosidase. Among a total of 359 strains tested, eight biotypes were observed, the most common ones being types 1 (beta-galactosidase positive, lipase positive, hippurate positive), 2 (beta-galactosidase negative, lipase positive, hippurate positive), and 5 (beta-galactosidase negative, lipase negative, hippurate positive). The...

  14. Biotyping of Bacillus cereus from the street vended Foods in Srinagar area of Kashmir

    Directory of Open Access Journals (Sweden)

    Yasir Hafeez

    Full Text Available Aim: The present study was undertaken to describe the biotyping of Bacillus cereus isolated from different street vended mutton tikka and chutney samples. Materials and Methods: A total of 100 street vended food samples comprising of 60 mutton tikka and 40 chutney samples were tested. Results: The biotype 3 and biotype 4 showed the highest occurrence with, 29.63% and 25.93% isolates falling in these biotypes, respectively. The percentage occurrence of the biotypes 1, 6, 2, 5, and 7 was 14.81%, 11.11%, 7.40%, 7.40% and 3.84%, respectively. The most common found biotypes in Mutton tikka were biotypes 3(29.63%, 4(25.93%, 1(14.81% and 6(11.11%. The Bacillus cereus strains isolated from chutney samples could be divided into 7 of the 9 possible biotypes. The biotypes 6 and 7 showed the highest occurrence with 38.46% and 30.76% falling in these biotypes, respectively. The biotype 5 and 2 were prevalent to the extent of 23.07%, 7.69%, respectively. The biotypes 3, 4 and 1 were absent. The mean bacterial count of 60 mutton tikka and 40 chutney samples was 4.6817 and 5.6575 log cfu/g. 10 Conclusion: The field isolates and the standard strains of Bacillus cereus had similar cultural, morphological and biochemical characteristics. The biotypes recovered from the Mutton tikka samples were biotypes 3, 4, 1 and 6 and in chutneys the biotypes recovered were 6, 7, 5 and 2. The strains of Bacillus cereus were highly resistant to penicillin G (92.59%. [Vet World 2012; 5(10.000: 590-593

  15. A new biotype of Legionella dumoffii.

    OpenAIRE

    Edelstein, P H; Pryor, E P

    1985-01-01

    A new biotype of L. dumoffii was isolated from lung and sputum samples of an immunosuppressed patient with pneumonia. This strain differs from other described strains of L. dumoffii in that it fails to produce browning of tyrosine-containing buffered yeast extract medium.

  16. Longitudinal study of the biotypes of Gardnerella vaginalis.

    Science.gov (United States)

    Briselden, A M; Hillier, S L

    1990-12-01

    Gardnerella vaginalis is the predominant vaginal microorganism in women with bacterial vaginosis. However, this organism is also frequently isolated from women without signs or symptoms of vaginitis. Earlier studies have not revealed whether certain biotypes of G. vaginalis are more often associated with bacterial vaginosis or are more common in women who acquire bacterial vaginosis. We used a typing scheme based on tests for beta-galactosidase, hippurate hydrolysis, and lipase, using oleate as a substrate. Of 261 strains tested, the distribution of biotypes observed was as follows: 1, 13%; 2, 9%; 3, 5%; 4, 7%; 5, 41%; 6, 15%; and 8, 10%. Biotype 7 was not observed. The distributions of biotypes from women with and without bacterial vaginosis were found to be significantly different, with the lipase-positive biotypes (biotypes 1, 2, 3, and 4) being more predominant in women with vaginosis (41 versus 23%, P = 0.003). Of 40 women with normal vaginal flora at the index visit who remained normal at follow-up, 23 (57%) acquired a new biotype of G. vaginalis. By comparison, 90% of the 30 women who developed bacterial vaginosis acquired a new biotype of G. vaginalis (P = 0.003). Women with bacterial vaginosis at the index visit who were not treated were no more likely than normal women to have a shift in G. vaginalis biotype. However, 86% of the 30 women with bacterial vaginosis who were treated with an antibiotic at the index visit acquired a different biotype (P = 0.04 compared with the value for untreated women) regardless of treatment success. A trend toward the acquisition of a new biotype was observed among women who had contact with a new sexual partner (81 versus 65%, P = 0.15). These data demonstrate that the lipase-positive isolates of G. vaginalis are associated with bacterial vaginosis. Women who acquire bacterial vaginosis are more likely to have a shift in biotype than women who had normal flora at he follow-up, suggesting that the G. vaginalis isolates

  17. Investigation of Biofield Treatment on Antimicrobial Susceptibility, Biochemical Reaction Pattern and Biotyping of Enteropathogenic Multidrug-Resistant Escherichia coli Isolates

    OpenAIRE

    Trivedi, Mahendra Kumar

    2015-01-01

    Study background: Multidrug resistant Escherichia coli (MDR E. coli) has become a major health concern, and failure of treatment leads to huge health burden. Aim of the present study was to determine the impact of Mr. Trivedi’s biofield treatment on E. coli. Methods: Four MDR clinical lab isolates (LSs) of E. coli (LS 8, LS 9, LS 10, and LS 11) were taken and divided into two groups i.e. control and biofield treated. Control and treated samples were identified with respect...

  18. Complete genome sequences of both biotypes of a virus pair of bovine viral diarrhea virus subgenotype 1k

    OpenAIRE

    Marques Antunes de Oliveira, Adriano; Stalder, Hanspeter; Peterhans, Ernst; Sauter, Kay Sara; Schweizer, Matthias

    2013-01-01

    We determined the complete genome sequences of both biotypes of a virus pair of bovine viral diarrhea virus (BVDV) subgenotype 1k. The viruses were isolated from a persistently infected calf suffering from mucosal disease. Compared to the noncytopathic biotype, the cytopathic biotype contains an insertion of 84 nucleotides and 22 nucleotide changes.

  19. Biotyping of Malassezia pachydermatis strains using the killer system.

    Science.gov (United States)

    Coutinho, S D; Paula, C R

    1998-06-01

    The killer phenomenon has been used as epidemiological marker for Candida albicans, where hundreds of biotypes can be obtained. The objective of this study is to observe the behaviour of 30 strains of Malassezia pachydermatis isolated from dogs with otitis (15) or dermatitis (15) against 9 killer yeasts, which, when grouped in triplets produced a 3 digit code (biotype). The growth inhibition of the 30 strains of M. pachydermatis due to the effect of the killer yeasts used permitted the determination of the following biotypes: 888 (33.3%), 212 (26.7%), 111 (16.7%), 312 (6.7%), 512 (6.7%), 242 (3.3%), 311 (3.3%) and 411 (3.3%). Biotypes 888, 212 and 111 occurred most frequently in both ear canal and skin samples. PMID:17655416

  20. Oleate lipase activity in Gardnerella vaginalis and reconsideration of existing biotype schemes

    Directory of Open Access Journals (Sweden)

    Moncla Bernard J

    2009-04-01

    Full Text Available Abstract Background Gardnerella vaginalis is a facultative gram positive organism that requires subculture every 1–2 days to maintain viability. It has been linked with bacterial vaginosis (BV, a syndrome that has been associated with increased risk for preterm delivery, pelvic inflammatory disease and HIV acquisition. About 10% of the G. vaginalis isolates have been reported to produce sialidase, but there have not been any studies relating sialidase production and biotype. Sialidase activity is dramatically increased in the vaginal fluid of women with BV and bacterial sialidases have been shown to increase the infectivity of HIV in vitro. There are 8 different biotypes of G. vaginalis. Biotypes 1–4 produce lipase and were reported to be associated with BV and the association of these biotypes with BV is under dispute. Other studies have demonstrated that G. vaginalis biotype 1 can stimulate HIV-1 production. Because of the discrepancies in the literature we compared the methods used to biotype G. vaginalis and investigated the relationship of biotype and sialidase production. Results A new medium for maintenance of Gardnerella vaginalis which allows survival for longer than one week is described. Some isolates only grew well under anaerobic conditions. Sialidase producing isolates were observed in 5 of the 6 biotypes tested. Using 4-methylumbelliferyl-oleate to determine lipase activity, instead of egg yolk agar, resulted in erroneous biotypes and does not provide reliable results. Conclusion Previous studies associating G. vaginalis biotype with bacterial vaginosis were methodologically flawed, suggesting there is not an association of G. vaginalis biotypes and bacterial vaginosis. Sialidase activity was observed in 5 of the 8 biotypes.

  1. Effect of low temperature on starvation-survival of the eel pathogen Vibrio vulnificus biotype 2.

    OpenAIRE

    Biosca, E G; Amaro, C; Marco-Noales, E; Oliver, J D

    1996-01-01

    At present, no reports exist on the isolation of the eel pathogen Vibrio vulnificus biotype 2 from water samples. Nevertheless, it has recently been demonstrated that this biotype can use water as a route of infection. In the present study, the survival of this pathogen in artificial seawater (ASW) microcosms at different temperatures (25 and 5 degrees C) was investigated during a 50-day period, with biotype 1 as a control, V. vulnificus biotype 2 was able to survive in the culturable state i...

  2. Genomic DNA fingerprint analysis of biotype 1 Gardnerella vaginalis from patients with and without bacterial vaginosis.

    Science.gov (United States)

    Wu, S R; Hillier, S L; Nath, K

    1996-01-01

    Of the 20 biotype 1 Gardnerella vaginalis isolates analyzed, 10 from patients with bacterial vaginosis and 10 from patients without bacterial vaginosis, none shared the same DNA fingerprint. However, a 1.18-kb HindIII fragment was common among 18 of the 20 biotype 1 isolates in a restriction fragment length polymorphism analysis with a 7.9-kb G. vaginalis DNA probe. PMID:8748302

  3. A modified scheme for biotyping Gardnerella vaginalis.

    Science.gov (United States)

    Benito, R; Vazquez, J A; Berron, S; Fenoll, A; Saez-Neito, J A

    1986-06-01

    A scheme is proposed for biotyping Gardnerella vaginalis, based on detection of hippurate hydrolysis, beta-galactosidase (ONPG) and lipase, and fermentation of arabinose, galactose and xylose. Seventeen biotypes were found among 197 strains from asymptomatic women and patients with bacterial vaginosis (non-specific vaginitis). The distribution of biotypes was similar in both populations but some biotypes were found more frequently in patients. The proposed scheme is compared with those previously described.

  4. Identification of beer spoilage microorganisms using the MALDI Biotyper platform.

    Science.gov (United States)

    Turvey, Michelle Elizabeth; Weiland, Florian; Meneses, Jon; Sterenberg, Nick; Hoffmann, Peter

    2016-03-01

    Beer spoilage microorganisms present a major risk for the brewing industry and can lead to cost-intensive recall of contaminated products and damage to brand reputation. The applicability of molecular profiling using matrix-assisted laser desorption/ionisation time-of-flight mass spectrometry (MALDI-TOF MS) in combination with Biotyper software was investigated for the identification of beer spoilage microorganisms from routine brewery quality control samples. Reference mass spectrum profiles for three of the most common bacterial beer spoilage microorganisms (Lactobacillus lindneri, Lactobacillus brevis and Pediococcus damnosus), four commercially available brewing yeast strains (top- and bottom-fermenting) and Dekkera/Brettanomyces bruxellensis wild yeast were established, incorporated into the Biotyper reference library and validated by successful identification after inoculation into beer. Each bacterial species could be accurately identified and distinguished from one another and from over 5600 other microorganisms present in the Biotyper database. In addition, wild yeast contaminations were rapidly detected and distinguished from top- and bottom-fermenting brewing strains. The applicability and integration of mass spectrometry profiling using the Biotyper platform into existing brewery quality assurance practices within industry were assessed by analysing routine microbiology control samples from a local brewery, where contaminating microorganisms could be reliably identified. Brewery-isolated microorganisms not present in the Biotyper database were further analysed for identification using LC-MS/MS methods. This renders the Biotyper platform a promising candidate for biological quality control testing within the brewing industry as a more rapid, high-throughput and cost-effective technology that can be tailored for the detection of brewery-specific spoilage organisms from the local environment.

  5. Identification of beer spoilage microorganisms using the MALDI Biotyper platform.

    Science.gov (United States)

    Turvey, Michelle Elizabeth; Weiland, Florian; Meneses, Jon; Sterenberg, Nick; Hoffmann, Peter

    2016-03-01

    Beer spoilage microorganisms present a major risk for the brewing industry and can lead to cost-intensive recall of contaminated products and damage to brand reputation. The applicability of molecular profiling using matrix-assisted laser desorption/ionisation time-of-flight mass spectrometry (MALDI-TOF MS) in combination with Biotyper software was investigated for the identification of beer spoilage microorganisms from routine brewery quality control samples. Reference mass spectrum profiles for three of the most common bacterial beer spoilage microorganisms (Lactobacillus lindneri, Lactobacillus brevis and Pediococcus damnosus), four commercially available brewing yeast strains (top- and bottom-fermenting) and Dekkera/Brettanomyces bruxellensis wild yeast were established, incorporated into the Biotyper reference library and validated by successful identification after inoculation into beer. Each bacterial species could be accurately identified and distinguished from one another and from over 5600 other microorganisms present in the Biotyper database. In addition, wild yeast contaminations were rapidly detected and distinguished from top- and bottom-fermenting brewing strains. The applicability and integration of mass spectrometry profiling using the Biotyper platform into existing brewery quality assurance practices within industry were assessed by analysing routine microbiology control samples from a local brewery, where contaminating microorganisms could be reliably identified. Brewery-isolated microorganisms not present in the Biotyper database were further analysed for identification using LC-MS/MS methods. This renders the Biotyper platform a promising candidate for biological quality control testing within the brewing industry as a more rapid, high-throughput and cost-effective technology that can be tailored for the detection of brewery-specific spoilage organisms from the local environment. PMID:26857464

  6. The Discovery of Resistant Sources of Spring Barley, Hordeum vulgare ssp. spontaneum, and Unique Greenbug Biotypes.

    Science.gov (United States)

    Armstrong, J Scott; Mornhinweg, Dolores W; Payton, Mark E; Puterka, Gary J

    2016-02-01

    The genetic sources for host-plant resistance to the greenbug (Schizaphis graminum Rondani) in barley (Hordeum vulgare ssp. spontaneum) are limited in that only two single dominant genes Rsg1 and Rsg2 are available for the complex of greenbug biotypes. We evaluated four new barley lines from the Wild Barley Diversity Collection (WBDC) that previously showed potential for greenbug resistance. Three of those entries, WBDC 53, WBDC 117, WBDC 336, exhibited very dominant sources of resistance to older known biotypes B, C, E, F, H, I, and TX1, which also add to the host-plant differentials used to separate these greenbug biotypes. We also re-evaluated the earlier known set of greenbug biotypes that have been in culture for several years against the known host-plant differentials, and included seven newer greenbug isolates collected from Wyoming to the full complement of small grain differentials. This resulted in the discovery of five new greenbug biotypes, WY10 MC, WY81, WY10 B, WY12 MC, and WY86. Wyoming isolates WY4 A and WY4 B were identical in their phenotypic profile, and should be combined as a single unique greenbug biotype. These barley trials resulted in finding new sources of host-plant resistance, although more research needs to be conducted on what type of resistance was found, and how it can be used. We also document that the Wheatland, Wyoming area serves as a very conducive environment for the development of new greenbug biotypes. PMID:26527793

  7. Cultural Characteristics and Biotype Identification of Isolate RSXJ-1 of Ralstonia solanacearum%烟草青枯病菌分离株RSXJ-1的培养性状及其生物型鉴定

    Institute of Scientific and Technical Information of China (English)

    崔朝宇; 张超群; 周泽科; 蒋军喜

    2012-01-01

      A tobacco plant with typical symptoms of bacterial wilt was collected from Xiajiang county of Jiangxi province. A bacterial isolate was obtained from the plant using gradient dilution isolation method, ant it was named RSXJ-1. With completion of its pathogenicity test, the isolate was identified molecularly as Ralstonia solanacearum. This paper investigated the cultural characteristics of the bacterial isolate on different media. The results showed that cultural characteristics of the bacterial isolate were consistent with the cultural characteristics of R. solanacearum. Experiment of biotype identification of the isolate was also conducted. The results showed that the isolate had the ability of both oxdizing lactose, maltose, cellobiose, mannitol, and sorbitol to produce acid and reducing nitrate. However, it had no ability of oxdizing dulcitol to produce acid. According to the results, the isolate was identified as biotypeⅢ-1 of R. solanacearum.%  从江西省峡江县烟区采集呈典型症状的青枯病烟株,采用平板梯度稀释分离法分离获得一株病原菌分离株,命名为 RSXJ-1.在完成致病性测定的基础上,通过分子生物学方法将该菌株鉴定为茄科劳尔氏菌(Ralstonia solanacearum).本文研究了该菌株在不同培养基上的培养性状,结果表明该菌株的培养性状与R. solanacearum的培养性状相一致;对该菌株进一步进行生物型研究,结果显示该菌株能利用乳糖、麦芽糖、纤维二糖、甘露醇和山梨醇氧化产酸并能还原硝酸盐;而不能利用甜醇氧化产酸,据此将该菌株鉴定为生物型Ⅲ-1.

  8. Longitudinal study of the biotypes of Gardnerella vaginalis.

    OpenAIRE

    Briselden, A M; Hillier, S L

    1990-01-01

    Gardnerella vaginalis is the predominant vaginal microorganism in women with bacterial vaginosis. However, this organism is also frequently isolated from women without signs or symptoms of vaginitis. Earlier studies have not revealed whether certain biotypes of G. vaginalis are more often associated with bacterial vaginosis or are more common in women who acquire bacterial vaginosis. We used a typing scheme based on tests for beta-galactosidase, hippurate hydrolysis, and lipase, using oleate ...

  9. Comparison of Bruker Biotyper system and Vitek MS system in the identification of clinical Gram-negative isolates%Bruker Biotyper和Vitek MS系统质谱分析鉴定革兰阴性菌临床分离株的比较研究

    Institute of Scientific and Technical Information of China (English)

    王璐; 杨柳; 任微; 褚美玲; 孟冬娅; 薛文成

    2014-01-01

    Objective To compare and evaluate the use of two matrix-assisted laser desorption ionization time of flight mass spectrometry (MALDI-TOF-MS) systems, Bruker MALDI Biotyper system (Bruker Biotyper system) and MALDI-TOF Vitek MS sys-tem ( Vitek MS system ) in the identification of Gram-negative clinical isolates. Methods A total of 120 Gram-negative isolates were collected from blood, urine, cerebrospinal fluid, secretion, wound swab and sputum samples from patients treated in General Hos-pital of Shenyang Military Area Command from Mar. 2012 to Jan. 2013. Each isolate was firstly identified to the species by Vitek 2 Compact system, and then identified by Bruker Biotyper system and Vitek MS system. Isolates differently identified by the three sys-tems were finally confirmed by 16S rDNA sequencing as the gold standard. Results Of the 120 isolates, 95.0%were correctly identi-fied to the genus level by Bruker Biotyper system and 92.5%by Vitek MS system, and 89.2%were correctly identified to the species level by Bruker Biotyper system and 86.7%by Vitek MS system, and the differences between them were not significant. Conclusions Bruker Bio-typer system and Vitek MS system were not significantly different in the accuracy rates of identifying clinical Gram-negative isolates. In addition, the identification results of the two systems are closely related to their own databases of pictorial works.%目的:比较并评价两种基质辅助激光解吸电离飞行时间质谱(matrix-assisted laser desorption ionization time of flight mass spectrometry, MALDI-TOF-MS)系统---Bruker MALDI Biotyper系统(以下简称Bruker Biotyper系统)和MALDI-TOF Vitek MS系统(以下简称Vitek MS系统)在革兰阴性菌临床分离株鉴定中的应用。方法收集沈阳军区总医院2012年3月-2013年1月分离自血液、尿液、脑脊液、分泌物、伤口拭子和痰液临床标本的革兰阴性菌共120株。应用Vitek 2 Compact生化鉴定系统将每株细菌

  10. Genetic variation amongst biotypes of Dactylopius tomentosus.

    Science.gov (United States)

    Mathenge, Catherine W; Riegler, Markus; Beattie, G Andrew C; Spooner-Hart, Robert N; Holford, Paul

    2015-03-01

    The tomentose cochineal scale insect, Dactylopius tomentosus (Lamarck) (Hemiptera: Dactylopiidae), is an important biological control agent against invasive species of Cylindropuntia (Caryophyllales: Cactaceae). Recent studies have demonstrated that this scale is composed of host-affiliated biotypes with differential host specificity and fitness on particular host species. We investigated genetic variation and phylogenetic relationships among D. tomentosus biotypes and provenances to examine the possibility that genetic diversity may be related to their host-use pattern, and whether their phylogenetic relationships would give insights into taxonomic relatedness of their host plants. Nucleotide sequence comparison was accomplished using sequences of the mitochondrial cytochrome c oxidase I (COI) gene. Sequences of individuals from the same host plant within a region were identical and characterized by a unique haplotype. Individuals belonging to the same biotype but from different regions had similar haplotypes. However, haplotypes were not shared between different biotypes. Phylogenetic analysis grouped the monophyletic D. tomentosus into 3 well-resolved clades of biotypes. The phylogenetic relationships and clustering of biotypes corresponded with known taxonomic relatedness of their hosts. Two biotypes, Fulgida and Mamillata, tested positive for Wolbachia (α-Proteobacteria), a common endosymbiont of insects. The Wolbachia sequences were serendipitously detected by using insect-specific COI DNA barcoding primers and are most similar to Wolbachia Supergroup F strains. This study is the first molecular characterization of cochineal biotypes that, together with Wolbachia sequences, contribute to the better identification of the biotypes of cochineal insects and to the biological control of cacti using host-specific biotypes of the scale. PMID:24619863

  11. Wild Birds as biological indicators of environmental pollution: biotyping and antimicrobial resistance patterns of Escherichia coli isolated from Audouin's gulls (Larus Audouinii living in the Bay of Gallipoli (Italy

    Directory of Open Access Journals (Sweden)

    Antonio Camarda

    2006-01-01

    Full Text Available E. Coli biotyping and antimicrobial succeptibility tests were performed on fortyeight cloacal swabs collected from a popoulation of Audouin's gulls ((Larus Audouinii living in the Bay of Gallipoli (Lecce, Italy. The aim was to assess the pathogenic potential of the strains the gulls carry and shed into the environment and to gain a better understanding of the microbial pollution of the aera they live in.

  12. Wild Birds as biological indicators of environmental pollution: biotyping and antimicrobial resistance patterns of Escherichia coli isolated from Audouin's gulls (Larus Audouinii living in the Bay of Gallipoli (Italy

    Directory of Open Access Journals (Sweden)

    Egidio Mallia

    2010-01-01

    Full Text Available E. Coli biotyping and antimicrobial succeptibility tests were performed on fortyeight cloacal swabs collected from a popoulation of Audouin's gulls ((Larus Audouinii living in the Bay of Gallipoli (Lecce, Italy. The aim was to assess the pathogenic potential of the strains the gulls carry and shed into the environment and to gain a better understanding of the microbial pollution of the aera they live in.

  13. Characterization of bovine Haemophilus somnus by biotyping, plasmid profiling, REA-patterns and ribotyping

    DEFF Research Database (Denmark)

    Fussing, V.; Wegener, Henrik Caspar

    1993-01-01

    A total of 105 strains of H. somnus isolated from cattle in Denmark and other countries during 1982-1951 were compared with regard to biotypes (fermentation of 8 different sugars), plasmid profiles, Taq1 restriction endonuclease analysis of chromosomal DNA (REA-typing) and EcoRI-generated DNA...... restriction fragment length polymorphisms of rRNA genes (ribotyping). Eighty-four strains originating from cases of pneumonia, and 21 originating from the genitals of bulls were included in this study. Biotyping yielded 21 different types. Twenty-two of the isolates contained plasmids, and these were divided...... into 12 distinct plasmid profiles. Analysis of chromosomal DNA restriction patterns, resulted in 33 different REA patterns and 16 different ribopatterns in the investigated strains. Biotypes, REA-types, and ribotypes generally showed good correlation, whereas plasmid profiles did not correlate with any...

  14. Biotyping of Haemophilus using API 10S—an epidemiological tool?

    OpenAIRE

    Mehtar, S.; Afshar, S Amini

    1983-01-01

    One hundred and ninety-nine strains of Haemophilus isolates were biotyped by Kilian's method1 and a modified API 10S strip and the results compared. One hundred percent correlation was found between the two systems. The ONPG test proved of value in differentiating between Haemophilus influenzae and Haemophilus parainfluenzae when there was growth factor disc failure.

  15. Poultry-Like pA+ Biotype of Staphylococcus aureus CC346/084 Clone in Human Population.

    Science.gov (United States)

    Piechowicz, Lidia; Garbacz, Katarzyna

    2016-07-01

    The aim of the study was (1) to analyse the prevalence of P-like pA+ biotype of S. aureus in material from healthy and diseased individuals, not employed at slaughterhouses or meat processing plants, and (2) to analyse the relatedness of these strains and their genetic variability. The study included 344 strains of Staphylococcus aureus isolated from hospitalized patients with staphylococcal infections and from healthy carriers. The biotypes of S. aureus were determined on the basis of fibrinolysin and β-haemolysin production, coagulation of bovine plasma, and type of growth on crystal violet agar. Additionally, the strains were tested for the synthesis of protein A in order to distinguish between P-like pA+ and poultry biotypes. Fibrinolysin gene (sak) and methicillin resistance (mecA) were detected by means of PCR. The clonal structure of studied strains was analysed using pulsed field gel electrophoresis and sequencing of spa gene. Finally, the strains were typed with a basic set of 23 bacteriophages. The strains belonging to P-like pA+ biotype corresponded to nearly 20 % of all the studied strains. In contrast to the human biotype, they formed one clonal complex, spa-CC346/084. The P-like pA+ biotype strains did not synthesize fibrinolysin, lacked the sak gene, and showed susceptibility to methicillin. In contrast to the human biotype strains, they belonged mostly to phage group II. The P-like pA+ biotype strains, previously described solely in meat products and meat industry workers, can be also present in hospitalized patients and extra-hospital carriers. These strains form a single, fibrinolysin-negative, clonal complex t084/CC346. PMID:27061586

  16. Binding of paraquat to cell walls of paraquat resistant and susceptible biotypes of Hordeum glaucum

    Energy Technology Data Exchange (ETDEWEB)

    Alizadeh, H.M.; Preston, C.; Powles, S.B. [University of Adeilaide, Glen Osmond, SA (Australia). CRC for Weed Management Systems and Department of Crop Protection

    1997-12-31

    Full text: Paraquat is a widely used, non-selective, light activated contact herbicide acting as a photosystem electron acceptor. Resistance to paraquat in weed species has occurred in Australia and world-wide following extensive use of this herbicide. The mechanism of resistance to paraquat in `Hordeum glaucum` is correlated with reduced herbicide translocation and may be due to sequestration of herbicide away from its site of action by either binding to cell walls or other means. We measured paraquat binding to a cell wall fraction in resistant and susceptible biotypes of H. glaucum to determine whether differences in binding of paraquat to cell walls could explain herbicide resistance. The cell wall fraction was isolated from leaves of resistant and susceptible biotypes and incubated with {sup 14}C-labelled paraquat. Of the total paraquat - absorbed by a cell wall preparation, about 80% remains strongly bind to the cell wall and doesn`t readily exchange with solution in the absence of divalent cations. Divalent cations (Ca{sup 2+},putrescine and paraquat) can competitively exchange for paraquat tightly bound to the cell wall. From kinetic experiments it seems that there are two types of binding sites in the cell wall with different affinities for paraquat. No significant differences between cell wall, characteristics of resistant and susceptible biotypes of H. glaucum have been found in any of our experiments. Therefore, increased binding of paraquat to the cell wall appears not to be a mechanism for exclusion of paraquat in resistant biotype

  17. Shigella sonnei biotype g carrying class 2 integrons in southern Italy: a retrospective typing study by pulsed field gel electrophoresis

    Directory of Open Access Journals (Sweden)

    Romani Cristina

    2006-07-01

    Full Text Available Abstract Background Emergence and global dissemination of multiresistant strains of enteric pathogens is a very concerning problem from both epidemiological and Public Health points of view. Shigella sonnei is the serogroup of Shigella most frequently responsible for sporadic and epidemic enteritis in developed countries. The dissemination is associated most often to human to human transmission, but foodborne episodes have also been described. In recent years the circulation of multiresistant strains of S. sonnei biotype g carrying a class 2 integron has been reported in many countries worldwide. In southern Italy a strain with similar properties has been responsible for a large community outbreak occurred in 2003 in Palermo, Sicily. The objective of this study was to date the emergence of the biotype g strain carrying the class 2 integron in southern Italy and to evaluate the genetic heterogeneity of biotype g S. sonnei isolated throughout an extended interval of time. Methods A total of 31 clinical isolates of S. sonnei biotype g identified in southern Italy during the years 1971–2000 were studied. The strains were identified at the serogroup level, characterized by biochemical tests and submitted to antimicrobial susceptibility testing. Molecular typing was performed by pulsed field gel electrophoresis (PFGE after digestion of DNA by XbaI. Carriage of class 2 integrons was investigated by polymerase chain reaction (PCR with specific primers and confirmed by restriction endonuclease analysis of amplicons. Results The 15 isolates of S. sonnei biotype g identified in the decade 1971–1980 showed highly heterogeneous drug resistance profiles and pulsotypes. None of the isolates was simultaneous resistant to streptomycin and trimethoprim and none was class 2 integron positive. On the contrary, this resistance phenotype and class 2 integron carriage were very common among the 16 strains of biotype g identified in the following two decades

  18. Evaluation of MALDI Biotyper and VITEK MS for identifying clinical isolated Streptococcus spp.%MALDI Biotyper和VITEK MS基质辅助激光解析电离飞行时间质谱对链球菌鉴定的比较研究

    Institute of Scientific and Technical Information of China (English)

    顾丹霞; 余涛; 张晓飞; 张嵘

    2015-01-01

    Objective Using 16S rRNA gene sequencing as the gold standard method,to compare the performance of two matrix-assisted laser desorption ionization time of flight mass spectrometry system (MALDI Biotyper and VITEK MS) for identifying clinical isolates of Streptococcus spp.Methods One hundred and sixty two clinical Streptococcus isolates were collected at the Second Affiliated Hospital of Zhejiang University,from April to June,2014,and confirmed by 16S rRNA gene sequencing analysis.MALDI Biotyper and VITEK MS mass spectrometry system were used for identification and further evaluated by performance respectively.Results Of all the isolates tested,155 (155/162,95.68%) Streptococcus isolates were accurately identified to species level by MALDI Biotyper.Besides,MALDI Biotyper identified three Streptococcus mitis group as S.pneumoniae and one S.parasanguinis as S.australis.Another three S.pneumonia isolates were not identified accurately (values < 1.7).Although 156 (156/162,96.30%) isolates were accurately identified to species level (including subspecies) by VITEK MS system,two S.pneumoniae as S.mitis/S.oralis and one S.euinus as S.infantarius ssp.infantarius were misidentified.The two systems showed a 100% (51/51) accuracy in identifying all S.pyogenes and S.agalactiae isolates,and an accuracy higher than 85% for S.pneumoniae.Conclusions Both systems showed potent identification ability for Streptococcus spp.,VITEK MS system showed more clinical significance in accurately identifying some subspecies.Mass spectrometry system can be used as a rapid identification method for Streptococcs spp.in clinical practice.%目的 以16S rRNA基因测序鉴定结果为金标准,研究比较两种基质辅助激光解析电离飞行时间质谱鉴定系统(MALDI Biotyper和VITEK MS)在临床分离链球菌鉴定中的表现.方法 2014年4至6月收集浙江大学医学院附属第二医院临床分离的链球菌162株,经16S rRNA基因测

  19. PCR-based characterization of Yersinia enterocolitica : comparison with biotyping and serotyping

    OpenAIRE

    Odinot, P. T.; Meis, J. F. G. M.; Hurk, P.J.J.C. van den; Hoogkamp-Korstanje, J. A. A.; Melchers, W. J. G.

    1995-01-01

    PCR-based DNA fingerprinting was used to characterize 48 clinical isolates of Yersinia enterocolitica. The samples were examined by random amplified polymorphic DNA (RAPD-PCR) and inter-repeat PCR (IR-PCR). IR-PCR with two enterobacterial repetitive intergenic consensus primers resulted in patterns which were poorly discriminated; 2 of 11 arbitrary primers (RAPD-PCR) provided sufficient discriminatory power. In comparisons with serotyping and biotyping, RAPD-fingerprinting was the most discri...

  20. Oleate lipase activity in Gardnerella vaginalis and reconsideration of existing biotype schemes

    OpenAIRE

    Moncla Bernard J; Pryke Kara M

    2009-01-01

    Abstract Background Gardnerella vaginalis is a facultative gram positive organism that requires subculture every 1–2 days to maintain viability. It has been linked with bacterial vaginosis (BV), a syndrome that has been associated with increased risk for preterm delivery, pelvic inflammatory disease and HIV acquisition. About 10% of the G. vaginalis isolates have been reported to produce sialidase, but there have not been any studies relating sialidase production and biotype. Sialidase activi...

  1. Draft Genome Sequence of Environmental Vibrio cholerae 2012EL-1759 with Similarities to the V. cholerae O1 Classical Biotype

    OpenAIRE

    Katz, Lee S.; Turnsek, Maryann; Kahler, Amy; Hill, Vincent R.; Boyd, E. Fidelma; Tarr, Cheryl L.

    2014-01-01

    Vibrio cholerae 2012EL-1759 is an environmental isolate from Haiti that was recovered in 2012 during a cholera outbreak. The genomic backbone is similar to that of the prototypical V. cholerae O1 classical biotype strain O395, and it carries the Vibrio pathogenicity islands (VPI-1 and VPI-2) and a cholera toxin (CTX) prephage.

  2. Recessive mutations in a distal PTF1A enhancer cause isolated pancreatic agenesis.

    Science.gov (United States)

    Weedon, Michael N; Cebola, Inês; Patch, Ann-Marie; Flanagan, Sarah E; De Franco, Elisa; Caswell, Richard; Rodríguez-Seguí, Santiago A; Shaw-Smith, Charles; Cho, Candy H-H; Lango Allen, Hana; Houghton, Jayne A L; Roth, Christian L; Chen, Rongrong; Hussain, Khalid; Marsh, Phil; Vallier, Ludovic; Murray, Anna; Ellard, Sian; Ferrer, Jorge; Hattersley, Andrew T

    2014-01-01

    The contribution of cis-regulatory mutations to human disease remains poorly understood. Whole-genome sequencing can identify all noncoding variants, yet the discrimination of causal regulatory mutations represents a formidable challenge. We used epigenomic annotation in human embryonic stem cell (hESC)-derived pancreatic progenitor cells to guide the interpretation of whole-genome sequences from individuals with isolated pancreatic agenesis. This analysis uncovered six different recessive mutations in a previously uncharacterized ~400-bp sequence located 25 kb downstream of PTF1A (encoding pancreas-specific transcription factor 1a) in ten families with pancreatic agenesis. We show that this region acts as a developmental enhancer of PTF1A and that the mutations abolish enhancer activity. These mutations are the most common cause of isolated pancreatic agenesis. Integrating genome sequencing and epigenomic annotation in a disease-relevant cell type can thus uncover new noncoding elements underlying human development and disease. PMID:24212882

  3. Improved Biotyping Schemes for Campylobacter jejuni and Campylobacter coli

    OpenAIRE

    1985-01-01

    Campylobacter jejuni (20 strains) and Campylobacter coli (12 strains) were assigned to four biovars for each species based on phenotypic tests that were easy to perform and interpret. The resulting biotyping schemes offer a greater degree of distinction among C. jejuni and C. coli strains than any of the other biotyping schemes previously described for these organisms.

  4. Proteomic-based biotyping reveals hidden diversity within a microalgae culture collection: An example using Dunaliella

    Science.gov (United States)

    Emami, Kaveh; Hack, Ethan; Nelson, Andrew; Brain, Chelsea M.; Lyne, Fern M.; Mesbahi, Ehsan; Day, John G.; Caldwell, Gary S.

    2015-05-01

    Accurate and defendable taxonomic identification of microalgae strains is vital for culture collections, industry and academia; particularly when addressing issues of intellectual property. We demonstrate the remarkable effectiveness of Matrix Assisted Laser Desorption Ionisation Time of Flight Mass Spectrometry (MALDI-TOF-MS) biotyping to deliver rapid and accurate strain separation, even in situations where standard molecular tools prove ineffective. Highly distinctive MALDI spectra were obtained for thirty two biotechnologically interesting Dunaliella strains plus strains of Arthrospira, Chlorella, Isochrysis, Tetraselmis and a range of culturable co-occurring bacteria. Spectra were directly compared with genomic DNA sequences (internal transcribed spacer, ITS). Within individual Dunaliella isolates MALDI discriminated between strains with identical ITS sequences, thereby emphasising and enhancing knowledge of the diversity within microalgae culture collections. Further, MALDI spectra did not vary with culture age or growth stage during the course of the experiment; therefore MALDI presents stable and accurate strain-specific signature spectra. Bacterial contamination did not affect MALDI’s discriminating power. Biotyping by MALDI-TOF-MS will prove effective in situations wherein precise strain identification is vital, for example in cases involving intellectual property disputes and in monitoring and safeguarding biosecurity. MALDI should be accepted as a biotyping tool to complement and enhance standard molecular taxonomy for microalgae.

  5. Isolation and characterization of three cassava elongation factor 1 alpha (MeEF1A promoters.

    Directory of Open Access Journals (Sweden)

    Sony Suhandono

    Full Text Available In plant genetic engineering, the identification of gene promoters leading to particular expression patterns is crucial for the development of new genetically modified plant generations. This research was conducted in order to isolate and characterize several new promoters from cassava (Manihot esculenta Crantz elongation factor 1 alpha (EF1A gene family.Three promoters MeEF1A3, MeEF1A5 and MeEF1A6 were successfully isolated [corrected]. Sequence analyses showed that all of the promoters contain three conserved putative cis-acting elements which are located upstream of the transcription start site. These elements are included a TEF1, a TELO and TATA boxes. In addition, all of the promoters also have the 5'UTR intron but with a different lengths. These promoters were constructed translationally with gusA reporter gene (promoter::gusA fusion in pBI-121 binary vector to build a new binary vector using Overlap Extension PCR Cloning (OEPC technique. Transient expression assay that was done by using agroinfiltration method was used to show functionality of these promoters. Qualitative and quantitative analysis from GUS assay showed that these promoters were functional and conferred a specific activity in tobacco seedlings (Nicotiana tabacum, tomato fruits (Solanum lycopersicum and banana fruits (Musa acuminata. We hypothesized that MeEF1A6 could be categorized as a constitutive promoter because it was able to drive the gene expression in all transformed tissue described in here and also comparable to CaMV35S. On the other hand, MeEF1A3 drove specific expression in the aerial parts of seedlings such as hypocotyl and cotyledon thus MeEF1A5 drove specific expression in fruit tissue. The results obtained from transient analysis showed that these promoters had a distinct activity although they came from same gene family. The DNA sequences identified here are new promoters potentially use for genetic engineering in cassava or other plants.

  6. Heterogeneity in restriction patterns of Gardnerella vaginalis isolates from individuals with bacterial vaginosis.

    Science.gov (United States)

    Nath, K; Devlin, D; Beddoe, A M

    1992-02-01

    This study was undertaken to resolve the genetic make up of Gardnerella vaginalis present in bacterial vaginosis (BV). DNA from several G. vaginalis isolates from within and between individual BV patients were compared by BamHI, ClaI and EcoRI restriction endonuclease analysis (REA) followed by a restriction fragment length polymorphism (RFLP) study, utilizing a 5.7-kb BamHI G. vaginalis ATCC14018 DNA probe. Four G. vaginalis isolates from one patient (GVP-062) were composed of 3 different biotypes (biotypes 3, 5 and 8), and while the REA mirrored the biotype, in RFLP studies at least 3 isolates had DNA fragments in common. All of the isolates from 2 other patients (GVP-063 and GVP-072) represented a single biotype (biotype 2), but under REA and in RFLP studies, the isolates GVP-063 differed from GVP-072. An opposite case existed with the isolates GVP-072 (biotype 2) and GVP-065 (biotype 5), which appeared similar under REA and in RFLP studies. Finally, reisolates after 8 weeks (GVP-080) from a BV patient (isolates GVP-065) representing the same biotype (biotype 5) differed under REA and in RFLP studies. Thus, lacking any unique DNA fingerprint, G. vaginalis occurring in BV represents a (genetically) mixed population.

  7. Immersion vaccination against Yersinia ruckeri O1, biotype 2 confers cross protection against Y. ruckeri O1 biotype 1

    DEFF Research Database (Denmark)

    Raida, Martin Kristian; Neumann, Lukas; Kragelund Strøm, Helene;

    organs (head kidney, spleen, liver, brain, muscle, heart, intestine, skin and gill). Seven days post infection 40% of mock-vaccinated fish were still heavy infected, which corresponds well with overall mortality in this group (35%). In general pro-inflammatory cytokine expression was higher in the mock......A new biotype 2 of Y. ruckeri O1, which lacks motility has proven highly virulent for rainbow trout, and is causing disease in cultured trout even in fish vaccinated with commercial ERM biotype 1 vaccines. Not much is known about immunity against biotype 2, and therefore have we produced a Y...

  8. Distribution of biotypes and leukotoxic activity of Aggregatibacter actinomycetemcomitans isolated from Brazilian patients with chronic periodontitis Distribuição de biótipos e atividade leucotóxica de Aggregatibacter actinomycetemcomitans isolados de pacientes brasileiros com periodontite crônica

    Directory of Open Access Journals (Sweden)

    Elerson Gaetti-Jardim Jr.

    2008-12-01

    Full Text Available Aggregatibacter actinomycetemcomitans is an important etiologic agent of the periodontitis and is associated with extra-oral infections. In this study, the detection of the ltxA gene as well as the ltx promoter region from leukotoxic A. actinomycetemcomitans isolated from 50 Brazilian patients with periodontitis and 50 healthy subjects was performed. The leukotoxic activity on HL-60 cells was also evaluated. Leukotoxic activity was determined using a trypan blue exclusion method. The 530 bp deletion in the promoter region was evaluated by PCR using a PRO primer pair. A. actinomycetemcomitans was detected by culture and directly from crude subgingival biofilm by PCR using specific primers. By culture, A. actinomycetemcomitans was detected in nine (18% of the periodontal patients and one (2% healthy subject. However, by PCR, this organism was detected in 44% of the periodontal patients and in 16% of the healthy subjects. It was verified a great discrepancy between PCR detection of the ltx operon promoter directly from crude subgingival biofilm and from bacterial DNA. Only one periodontal sample harbored highly leukotoxic A. actinomycetemcomitans. Moreover, biotype II was the most prevalent and no correlation between biotypes and leukotoxic activity was observed. The diversity of leukotoxin expression by A. actinomycetemcomitans suggests a role of this toxin in the pathogenesis of periodontal disease and other infectious diseases.Aggregatibacter actinomycetemcomitans é um importante agente etiológico da periodontite e produz infecções extra-bucais. Neste estudo, foram detectados os biótipos, o gene ltxA associado à produção de leucotoxina e o promotor ltx em A. actinomycetemcomitans de pacientes com e sem periodontite. A atividade leucotóxica sobre células HL-60 também foi avaliada. A atividade leucotóxica foi determinada através do método de exclusão do azul de tripam. A deleção de 530 bp no promotor ltx foi avaliada usando-se o

  9. Development of an antibody-based diagnostic method for the identification of Bemisia tabaci biotype B.

    Science.gov (United States)

    Baek, Ji Hyeong; Lee, Hye Jung; Kim, Young Ho; Lim, Kook Jin; Lee, Si Hyeock; Kim, Bum Joon

    2016-07-01

    The whitefly Bemisia tabaci is a very destructive pest. B. tabaci is composed of various morphologically undistinguishable biotypes, among which biotypes B and Q, in particular, draw attention because of their wide distribution in Korea and differential potentials for insecticide resistance development. To develop a biotype-specific protein marker that can readily distinguishes biotypes B from other biotypes in the field, we established an ELISA protocol based on carboxylesterase 2 (COE2), which is more abundantly expressed in biotypes B compared with Q. Recombinant COE2 was expressed, purified and used for antibody construction. Polyclonal antibodies specific to B. tabaci COE2 [anti-COE2 pAb and deglycosylated anti-COE2 pAb (DG anti-COE2 pAb)] revealed a 3-9-fold higher reactivity to biotype B COE2 than biotype Q COE2 by Western blot and ELISA analyses. DG anti-COE2 pAb exhibited low non-specific activity, demonstrating its compatibility in diagnosing biotypes. Western blot and ELISA analyses determined that one of the 11 field populations examined was biotype B and the others were biotype Q, suggesting the saturation of biotype Q in Korea. DG anti-COE2 pAb discriminates B. tabaci biotypes B and Q with high specificity and accuracy and could be useful for the development of a B. tabaci biotype diagnosis kit for on-site field applications. PMID:27265822

  10. Occurrence of Campylobacter jejuni and Campylobacter coli and their biotypes in beef and dairy cattle from the south of Chile

    OpenAIRE

    Heriberto Fernández; Marianne Hitschfeld

    2009-01-01

    The prevalence of Campylobacter jejuni and Campylobacter coli and their biotypes in beef and dairy cattle from the South of Chile was established. Campylobacter were statistically more prevalent among beef cattle (35.9%) than among dairy cattle (21.3%), being C. jejuni the species most frequently isolated.Foi estabelecida a prevalência de Campylobacter jejuni e Campylobacter coli e seus biotipos, em bovinos de corte e de leite do sul do Chile. Campylobacter foi estatisticamente mais prevalent...

  11. Identification of a virulence determinant that is conserved in the Jawetz and Heyl biotypes of [Pasteurella] pneumotropica.

    Science.gov (United States)

    Sasaki, Hiraku; Ishikawa, Hiroki; Terayama, Hayato; Asano, Ryoki; Kawamoto, Eiichi; Ishibashi, Hidetoshi; Boot, Ron

    2016-08-01

    [Pasteurella] pneumotropica is a ubiquitous bacterium frequently isolated from laboratory rodents. Although this bacterium causes various diseases in immunosuppressed animals, little is known about major virulence factors and their roles in pathogenicity. To identify virulence factors, we sequenced the genome of [P.] pneumotropica biotype Heyl strain ATCC 12555, and compared the resulting non-contiguous draft genome sequence with the genome of biotype Jawetz strain ATCC 35149. Among a large number of genes encoding virulence-associated factors in both strains, four genes encoding for YadA-like proteins, which are known virulence factors that function in host cell adherence and invasion in many pathogens. In this study, we assessed YadA distribution and biological activity as an example of one of virulence-associated factor shared, with biotype Jawetz and Heyl. More than half of mouse isolates were found to have at least one of these genes; whereas, the majority of rat isolates did not. Autoagglutination activity, and ability to bind to mouse collagen type IV and mouse fibroblast cells, was significantly higher in YadA-positive than YadA-negative strains. To conclude, we identified a large number of candidate genes predicted to influence [P.] pneumotropica pathogenesis. PMID:27402782

  12. Familial isolated primary pigmented nodular adrenocortical disease associated with a novel low penetrance PRKAR1A gene splice site mutation

    DEFF Research Database (Denmark)

    Storr, Helen L; Metherell, Louise A; Dias, Renuka;

    2010-01-01

    Primary pigmented nodular adrenocortical disease (PPNAD) is associated with inactivating germline protein kinase A regulatory subunit type 1-alpha (PRKAR1A) mutations and loss of heterozygosity at the 17q22-24 locus in approximately 50% patients. PRKAR1A mutations are observed in both isolated PP...

  13. Familial isolated primary pigmented nodular adrenocortical disease associated with a novel low penetrance PRKAR1A gene splice site mutation

    DEFF Research Database (Denmark)

    Storr, Helen L; Metherell, Louise A; Dias, Renuka;

    2010-01-01

    Primary pigmented nodular adrenocortical disease (PPNAD) is associated with inactivating germline protein kinase A regulatory subunit type 1-alpha (PRKAR1A) mutations and loss of heterozygosity at the 17q22-24 locus in approximately 50% patients. PRKAR1A mutations are observed in both isolated...

  14. Modification of Herbicide Binding to Photosystem II in Two Biotypes of Senecio vulgaris L

    Science.gov (United States)

    Pfister, Klaus; Radosevich, Steven R.; Arntzen, Charles J.

    1979-01-01

    The present study compares the binding and inhibitory activity of two photosystem II inhibitors: 3-(3,4-dichlorophenyl)-1,1-dimethylurea (diuron [DCMU]) and 2-chloro-4-(ethylamine)-6-(isopropyl amine)-S-triazene (atrazine). Chloroplasts isolated from naturally occurring triazine-susceptible and triazine-resistant biotypes of common groundsel (Senecio vulgaris L.) showed the following characteristics. (a) Diuron strongly inhibited photosynthetic electron transport from H2O to 2,6-dichlorophenolindophenol in both biotypes. Strong inhibition by atrazine was observed only with the susceptible chloroplasts. (b) Hill plots of electron transport inhibition data indicate a noncooperative binding of one inhibitor molecule at the site of action for both diuron and atrazine. (c) Susceptible chloroplasts show a strong diuron and atrazine binding (14C-radiolabel assays) with binding constants (K) of 1.4 × 10−8 molar and 4 × 10−8 molar, respectively. In the resistant chloroplasts the diuron binding was slightly decreased (K = 5 × 10−8 molar), whereas no specific atrazine binding was detected. (d) In susceptible chloroplasts, competitive binding between radioactively labeled diuron and non-labeled atrazine was observed. This competition was absent in the resistant chloroplasts. We conclude that triazine resistance of both intact plants and isolated chloroplasts of Senecio vulgaris L. is based upon a minor modification of the protein in the photosystem II complex which is responsible for herbicide binding. This change results in a specific loss of atrazine (triazine)-binding capacity. PMID:16661120

  15. Association of plasmid typing to biotyping and antibiotyping in the characterization of outbreaks by Acinetobacter baumannii

    Directory of Open Access Journals (Sweden)

    Maria Cristina Bronharo Tognim

    1999-01-01

    Full Text Available During an outbreak at an University Hospital, from April to September, in 1994, sixteen strains of Acinetobacter baumannii were isolated from patients and one strain from an enteral solution. We afterwards analyzed the outbreak by means of plasmid typing, antibiotic resistance typing and biotyping. Two main plasmid profiles were identified. Twelve strains belonged to biotype 2, and five to biotype 19. Susceptibility to amikacin and to carbenicillin allowed classification of the strains into two groups. The results show that association of those three typing methods allowed the differentiation of what was at first considered as a single outbreak into two apparently unrelated outbreaks.Durante um surto ocorrido de abril a setembro de 1994 em um Hospital Universitário, dezesseis cepas de Acinetobacter baumannii foram isoladas de pacientes e uma de solução enteral. Nós posteriormente analizamos as cepas isoladas durante o surto pelos seguintes métodos de tipagem : perfil de DNA plasmidial, perfil de antibiograma e biotipagem. Dois padrões de tipagem foram identificados pela análise do perfil plasmidial. Doze cepas foram caracterizadas como sendo do biotipo 2, e cinco do biotipo 19. O padrão de sensibilidade a amicacina e a carbenicilina possibilitou a classificação das cepas em dois grupos. Os resultados demonstraram que estes três métodos de tipagem associados possibilitaram a diferenciação do que primeiramente foi considerado como um único surto, em dois surtos aparentemente não relacionados.

  16. Identification of three major Bemisia tabaci biotypes in China based on morphological and DNA polymorphisms

    Institute of Scientific and Technical Information of China (English)

    Baoli Qiu; Yanping Chen; Li Liu; Weilu Peng; Xiaoxi Li; Yuzhou Du; Shunxiang Ren

    2009-01-01

    The sweet potato whitefly, Bemisia tabaci, is a complex species, and many of its biotypes are important agricultural pests. The B and Q biotypes are invasive and coexist with the native Cv biotype on vegetable and ornamental crops in China. In this study, these three bio-types were identified based on their morphological characteristics, RAPD-PCR analysis, and DNA sequences of the COl gene. The ante-rior and posterior wax fringes of the B, Q, and Cv biotypes significantly differed from each other. Based on this morphological characteristic, the three biotypes can easily be distinguished in greenhouses and fields. Genomic DNA RAPD-PCR band patterns also revealed differences between these biotypes using the H16 primer. The B biotype has three bright DNA bands between 250 and 600 bp, the Q biotype only has one bright band at ~300 bp, while the Cv biotype has no band between 250 and 500 bp. Both the Cv and Q biotypes have two bright bands at ~750 and 1000 bp while the B biotype has only one band at ~1000 bp. Based on the COI gene, the genetic identity between B and Cv, B and Q, and Q and CV was 85.8%, 94.7%, and 86.0%, respectively. The MP tree indicated that the phylogenetic relationship between the B and Q biotypes is much closer than that between the B and Cv or the Q and Cv biotypes. The uses of the morphological, RAPD-PCR, and DNA sequencing methods in biotype identification of B. tabaci are discussed.

  17. Studying genetic diversity of whitefly B. tabaci Egyptian isolates in relation to some worldwide isolates

    Directory of Open Access Journals (Sweden)

    Inas Farouk Fahmy

    2015-06-01

    Full Text Available Bemisia tabaci (Gennadius (Hemiptera, Aleyrodidae is considered to be one of the most damaging pests in agriculture, causing severe losses in crops worldwide, affecting the tropical and subtropical regions. Random Amplified Polymorphic DNA-Polymerase Chain Reaction (RAPD-PCR was used to assess the genetic diversity between different isolates collected from different regions in Egypt compared with some other worldwide isolates of this insect pest. Out of 12 primers 8 primers from Operon technology have shown to differentiate between 13 collected B. tabaci samples from all over Egypt and some other samples collected from different countries with two other populations representing biotypes A and B collected from the US used for biotype demarcation. Using 13 insect samples, RAPD analysis has produced a total number of 72 markers; about 68 polymorphic markers were revealed. The total number of bands obtained for each primer ranged from 4 to 14 within an average of 9 bands per primer. Of the pair wise combination among fifteen populations Ismailia population showed the highest similarity index (0.947, while US biotype A scored the lowest similarity index (0.326. Two major clusters were formed from the UPGMA dendrogram, which was constructed based on Dice similarity coefficient. RAPD-PCR screening demarcated the whitefly population based on the host species and genetic biotypes. Two major clusters have been revealed as A and B with two other minor clusters A1, A2, and B1, B2. Most of the samples collected from Egypt were clustered together in a minor cluster named A1. A1 group is divided into two sub-groups. A1a comprises the populations from Beni-Sweif in Upper Egypt, Ismailia, Kalyobia, El-Fayoum, Tanta, Kafr El-Sheikh, Alexandria, and A1b comprises Spain and Sudan. Group A1a is clustered together based on their host which belongs to the Cucurbitaceae family while Alexandria was separated individually based on its host which is cauliflower. Through

  18. Distribution and Diversity of hmw1A Among Invasive Nontypeable Haemophilus influenzae Isolates in Iran

    Science.gov (United States)

    Shahini Shams Abadi, Milad; Siadat, Seyed Davar; Vaziri, Farzam; Davari, Mehdi; Fateh, Abolfazl; Pourazar, Shahin; Abdolrahimi, Farid; Ghazanfari, Morteza

    2016-01-01

    Background: The pathogenesis of nontypeable Haemophilus influenzae (NTHi) begins with adhesion to the rhinopharyngeal mucosa. Almost 38–80% of NTHi clinical isolates produce proteins that belong to the High Molecular Weight (HMW) family of adhesins, which are believed to facilitate colonization. Methods: In the present study, the prevalence of hmwA, which encodes the HMW adhesin, was determined for a collection of 32 NTHi isolates. Restriction Fragment Length Polymorphism (RFLP) was performed to advance our understanding of hmwA binding sequence diversity. Results: The results demonstrated that hmwA was detected in 61% of NTHi isolates. According to RFLP, isolates were divided into three groups. Conclusion: Based on these observations, it is hypothesized that some strains of nontypeable Haemophilus influenzae infect some specific areas more than other parts. PMID:27141269

  19. Isolation and Genetic Analysis of Bovine Viral Diarrhea Virus from Infected Cattle in Indiana

    Directory of Open Access Journals (Sweden)

    Roman M. Pogranichniy

    2011-01-01

    Full Text Available Species and biotype distribution was determined in 44 bovine viral diarrhea virus- (BVDV- positive samples submitted to the Animal Disease Diagnostic Laboratory (ADDL in Indiana during 2006–2008. BVDV RNA was detected in the 5′-untranslated region and Npro region using reverse transcriptase PCR followed by sequencing analysis of the PCR product. Additionally, cases were classified into one of six categories according to history and/or lesions: acute symptomatic, hemorrhagic, respiratory distress, reproductive, persistent infection (PI, and mucosal disease (MD. Of 44 BVDV-positive samples, 33 were noncytopathic (ncp, 10 were cytopathic (cp, and one presented both ncp and cp biotypes. Sequencing analysis demonstrated that all samples belonged to BVDV-1a, BVDV-1b, or BVDV-2. The most common isolate was ncp BVDV-1b, (44% followed by ncp BVDV-2a (24%. Among the six categories, respiratory clinical signs were the most common (36% followed by PI (25% and MD (16%.

  20. Physiology of Glyphosate-Resistant and Glyphosate-Susceptible Palmer Amaranth (Amaranthus palmeri) Biotypes Collected from North Carolina

    OpenAIRE

    Jared R. Whitaker; James D. Burton; Alan C. York; Jordan, David L.; Aman Chandi

    2013-01-01

    Glyphosate-resistant (GR) biotypes of Palmer amaranth are now commonly found across the southern United States. Experiments were conducted to characterize physiological differences between a GR biotype and a glyphosate-susceptible (GS) biotype from North Carolina. The GR biotype had an 18-fold level of resistance based upon rates necessary to reduce shoot fresh weight 50%. Shikimate accumulated in both biotypes following glyphosate application, but greater concentrations were found in GS plan...

  1. 牙龈生物型%Gingival biotype

    Institute of Scientific and Technical Information of China (English)

    林璐

    2015-01-01

    Gingival biotype is used to describe the features of the marginal periodontium and tooth form, and it is one predicting indicator for dental implant and periodontal treatment. It was presumed that the gingival biotype in individuals may be different. Different types of gingival biotype respond to chronic stimulations differently. Current-ly, gingival biotype is clinically classified as thin or thick according to the thickness at a point 2 mm apicaly to gingival margin examined by means of transgingival probing, probe transparency, CBCT and so on. So far, the classification and characteristics of ginvival biotype are still controversial. This paper reviews the definition, classification, character-istics, measurement methods and clinical application of various gingival biotypes.%牙龈生物型泛指牙周围组织及牙体组织的形态特征,是种植、牙周等美学治疗术后成功率的预测参考因素之一. 个体间的牙龈生物型是存在差异的,并且不同的牙龈生物型对外界刺激的反应不同.目前临床上多根据龈缘下2 mm处的牙龈厚度将牙龈生物型分为厚型和薄型,其检测手段主要有直接测量法、牙周探诊法、CBCT扫描法等. 由于牙龈生物型受地域、种族、遗传、牙根位置的影响较大,目前为止,关于牙龈生物型的分型、特征等仍存在争议,尚未达成共识. 本文就牙龈生物型的定义、临床分型和特征、测量方法、临床应用等作一综述.

  2. Isolation and identification among cockle isolates of Vibrio vulnificus isolated from Selangor, Malaysia

    Science.gov (United States)

    Kurdi Al-Dulaimi, Mohammed M.; Mutalib, Sahilah Abd.; Ghani, Ma`aruf Abd.

    2014-09-01

    Vibrio vulnificus infections are worldwide public health problems associated with illnesses resulting from consumption of raw or partially cooked seafood. The aim of this study was to investigate the presence and identification of V. vulnificus in cockles from local wet (40) and supermarkets (38) from Selangor, Malaysia from July 2013 to February 2014. A total of 78(n=78) cockle were examined for the presence of V. vulnificus and at about 32% (25/78) cockle samples were positive to this bacterium. Colonies morphological observation and biochemical characterization for those isolates showed 60% (15/78) of isolates were classified as biotype 1 and 40% (10/78) belong to biotype 2.

  3. Vibrio cholerae O1 isolated in Kenya.

    OpenAIRE

    Iwanaga, M; Mori, K.; Kaviti, J N

    1982-01-01

    Biological and serological analyses of 272 isolates of Vibrio cholerae O1 from six epidemics and from a few sporadic cases in Kenya were carried out. All of the isolates were identified as V. cholerae biotype E1 Tor, and 210 out of 272 isolates were hemolytic as examined by Feeley's method.

  4. Evaluation of culture methods for rapid screening of swine faecal samples for Yersinia enterocolitica O : 3 biotype 4

    DEFF Research Database (Denmark)

    Hoorfar, Jeffrey; Holmvig, C.B.F.

    1999-01-01

    In two studies, seven different culture protocols were compared to test naturally contaminated faecal samples from pigs for isolation of Y. enterocolitica serotype O; 3/biotype 4( n = 70 and n = 79). Four of the protocols were based on the Nordic Committee on Food Analysis (NMKL protocols), while......%) was comparable with the lengthy NMKL-protocols (16% and 11%), while the results of direct plating after 3 h (4%) and the extended enrichment in ITC-broth (4%) were very low. In addition, there was a marked reduction in the number of false positive plates in the short selective protocol (62% vs. 12%). The results...

  5. Differential content of glyphosate and its metabolites in Digitaria insularis biotypes

    Directory of Open Access Journals (Sweden)

    Leonardo Bianco de Carvalho

    2013-07-01

    Full Text Available Experiments were carried out in controlled conditions to analyze the role of metabolism of glyphosate in Digitaria insularis (sourgrass biotypes with differential response to the herbicide. Contents of glyphosate, aminomethylphosphonic acid (AMPA, glyoxylate, and sarcosine was detected in leaf tissues by using reversed-polarity capillarity electrophoresis. Glyphosate content in the A biotype increased from 19.7 up to 65.5 µg g fresh weight-1, whereas decreasing from 19.9 down to 5.0 µg g fresh weight-1 in the B biotype, from 48 up to 168 hours after treatment. At 168 hours after treatment, percentage of the sum of AMPA, glyoxylate, and sarcosine was > 56% in the B biotype, whereas a small percentage of metabolites (< 10% was found in the A biotype. Thus, the faster herbicide degradation in the B biotype is evidence that a differential metabolism of glyphosate can be conferring its lesser susceptibility to the herbicide.

  6. Genetic differentiation of Bemisia tabaci (Gennadius)(Hemiptera: Aleyrodidae) biotype Q based on mitochondrial DNA markers

    Institute of Scientific and Technical Information of China (English)

    Dong Chu; Fang-Hao Wan; Yun-Li Tao; Guo-Xia Liu; Zhong-Xue Fan; Yu-Ping Bi

    2008-01-01

    In the present study, genetic differentiation of Bemisia tabaci (Gennadius)biotype Q was analyzed based on mitochondrial cytochrome oxidase I (mt COI) gene sequence. The results showed that B. tabaci biotype Q could be separated into two subclades,which were labeled as subclades Q1 and Q2. Subclade Q1 was probably indigenous to the regions around the Mediterranean area and subclade Q2 to Israel or Cyprus. It was because B. tabaci was composed of several genetically distinct groups with a strong geographical association between more closely related biotypes. Not all of the B. tabaci biotype Q in the non-Mediterranean countries come from the same regions. Until now, all B. tabaci biotype Q in China were grouped into subclade Q1. The B. tabaci biotype Q introduced into the US included both subclades Q1 and Q2. The genetic structure analysis showed higher genetic variation of subclade Q1 than that of subclade Q2.

  7. Characterization of dental anatomy and gingival biotype in Asian populations.

    Science.gov (United States)

    Lee, Stacey A; Kim, Alexis C; Prusa, Louis A; Kao, Richard T

    2013-01-01

    Gingival and dental characteristics are risk factors for periodontal problems. With short or fused roots, a decreased periodontium results in some attachment loss, compromising periodontal stability. Similarly, with an increased incidence of thin gingival biotype, inflammatory and traumatic insults may result in gingival recession. Anecdotally, Asian dentitions have been described as having short roots with "thin gingiva". This cross-sectional study will utilize clinical data and radiographic interpretation to ascertain whether this clinical impression is valid.

  8. DEVELOPMENT OF A YERSINIA RUCKERI O1 BIOTYPE 2 WATERBORNE CHALLENGE MODEL FOR FUTURE ERM VACCINE TESTING IN RAINBOW TROUT

    DEFF Research Database (Denmark)

    Kragelund Strøm, Helene; Aalbæk, Bent; Otani, Maki;

    Yersinia ruckeri (Y.r.) O1 biotype (bt) 2 causes outbreaks of Enteric Redmouth disease (ERM) in vaccinated, farmed rainbow trout around the world. Y.r. O1 bt 1 has been known since first described from the Hagerman Valley in Idaho in the 1950’s and outbreaks have now been controlled by vaccination...... for more than 35 years. Recent years have shown ERM outbreaks caused by Y.r. O1 bt 2 reported from ERM vaccinated farmed rainbow trout stocks in both Europe and the USA. It has been suggested that Y.r. O1 bt 2 is more virulent than bt 1. In order to test this hypothesis we have collected Y.r. O1 isolates...... from ERM outbreaks in Danish rainbow trout farms during 2011. Some of the isolates were obtained from vaccinated stocks, which subsequently developed ERM disease outbreaks. The Y.r. O1 isolates have been characterized and biotyped according to mobility and hydrolysis of Tween-80, and almost all...

  9. Supracrestal gingival tissue: assessing relation with periodontal biotypes in a healthy periodontium.

    Science.gov (United States)

    Arora, Ritika; Narula, Satish C; Sharma, Rajinder K; Tewari, Shikha

    2013-01-01

    This cross-sectional study assessed the variability in supracrestal gingival tissue (SGT) dimensions in a healthy periodontium. SGT dimensions were evaluated for differences across various locations, tooth types, and periodontal biotypes. All measurements were made with a vernier caliper to the nearest 0.1 mm. A total of 1,932 sites in 366 teeth were statistically analyzed. Median overall SGT was recorded as 3.50 mm with a range from 1.80 to 6.20 mm. The thick-flat biotype exhibited greater median SGT than the thinscalloped biotype. When planning crown lengthening surgery, periodontal biotype may have a significant role in determining SGT dimensions.

  10. Isolation and characterization of YNTC- 1, a novel Alicyclobacillus sendaiensis strain

    Institute of Scientific and Technical Information of China (English)

    DING Jian-nan; HE Huan; ZHANG Cheng-gui; YU Yi-zun; QIU Guan-zhou

    2008-01-01

    A heterotrophic acidothermophilic bacterial strain, YNTC-1, was isolated from an acidic hot spring in Tengchong, Yunan, China. YNTC-1 grows at pH value of 1.5-8.0 and temperature of 40-70℃, with optimal pH and temperature at 3.0 and 55℃,respectively. The cells of the strain are in shape of short rod, with 1.0-1.2 μm in length and 0.7-0.8 μm in diameter, and with distinct spores at both poles of each cell. The predominant fatty acids in cellular membrane of the strain are C18:1ω7c. 16s rRNA gene analysis reveals that this strain is closely related to Alicyclobacillus sendaiensis, with over 99% sequence similarity. Based on phenotypie and genotypic analyses, YNTC-1 is identified as a member ofA. sendaiensis. Considering some important morphological and biochemical differences between strain YNTC-1 and A. sendaiensis ATCC 27009T, YNTC-1 may be proposed to be a novel subspecies of A. sendaiensis. However, this viewpoint has to be confirmed by further studies. Co-bioleaching of pyrite and chalcopyrite with strain YN22, Sulfobacillus thermosulfidooxidans, shows that strain YNTC-1 has no evident influence on bioleaching rates of these two sulphide minerals.

  11. Comparative Analysis of Population Genetic Structure in Bemisia tabaci (Gennadius) Biotypes B and Q Based on ISSR Marker

    Institute of Scientific and Technical Information of China (English)

    CHU Dong; WAN Fang-hao; XU Bao-yun; WU Qing-jun; ZHANG You-jun

    2008-01-01

    Bemisia tabaci (Gennadius) biotypes B and Q are two invasive biotypes in the species complex. The comparison of the population genetic structure of the two biotypes is of significance to show their invasive mechanism and to their control. The intersimple sequence repeats (ISSR) marker was used to analyze the 16 B-biotype populations and 4 Q-biotype populations worldwide with a Trialeurodes vaporariorum population in Shanxi Province, China, and a B. tabaci non-B/Q-biotype population in Zhejiang Province, China, was used as control populations. The analysis of genetic diversity showed that the diversity indexes of biotype Q including Nei's gene diversity index, Shannon informative index, and the percentage of polymorphic loci were higher than those of biotype B. The high genetic diversity of biotype Q might provide the genetic basis for the excellent ecological adaptation. Cluster analysis suggested that the ISSR could not be used in the phylogenetic analysis though it could easily distinguish the biotypes of B. tabaci. The difference of the population genetic structure between the biotype B and the biotype Q exists based on the ISSR marker. Meanwhile, the results suggested that the molecular marker has its limitation in the phylogenetic analysis among the biotypes of B. tabaci.

  12. Interference of Selected Palmer Amaranth (Amaranthus palmeri Biotypes in Soybean (Glycine max

    Directory of Open Access Journals (Sweden)

    Aman Chandi

    2012-01-01

    Full Text Available Palmer amaranth (Amaranthus palmeri S. Wats. has become difficult to control in row crops due to selection for biotypes that are no longer controlled by acetolactate synthase inhibiting herbicides and/or glyphosate. Early season interference in soybean [Glycine max (L. Merr.] for 40 days after emergence by three glyphosate-resistant (GR and three glyphosate-susceptible (GS Palmer amaranth biotypes from Georgia and North Carolina was compared in the greenhouse. A field experiment over 2 years compared season-long interference of these biotypes in soybean. The six Palmer amaranth biotypes reduced soybean height similarly in the greenhouse but did not affect soybean height in the field. Reduction in soybean fresh weight and dry weight in the greenhouse; and soybean yield in the field varied by Palmer amaranth biotypes. Soybean yield was reduced 21% by Palmer amaranth at the established field density of 0.37 plant m−2. When Palmer amaranth biotypes were grouped by response to glyphosate, the GS group reduced fresh weight, dry weight, and yield of soybean more than the GR group. The results indicate a possible small competitive disadvantage associated with glyphosate resistance, but observed differences among biotypes might also be associated with characteristics within and among biotypes other than glyphosate resistance.

  13. Is colonoscopy necessary in cases of infection by Streptococcus bovis biotype II?

    NARCIS (Netherlands)

    Corredoira, J.C.; Alonso, M.P.; Garcia-Pais, M.J.; Rabunal, R.; Garcia-Garrote, F.; Lopez-Roses, L.; Lancho, A.; Coira, A.; Pita, J.; Velasco, D.; Lopez-Alvarez, M.J.; Tjalsma, H.; Varela, J.

    2014-01-01

    The association of colorectal neoplasia (CRN) with Streptococcus bovis biotype I (SBI) infection is well recognized. However, this is not the case for Streptococcus bovis biotype II (SBII). We conducted this study in order to analyze the relationship between SBII and CRN. We analyzed all cases of ba

  14. Target site mutation and reduced translocation are present in a glyphosate-resistant Lolium multiflorum Lam. biotype from Spain.

    Science.gov (United States)

    González-Torralva, Fidel; Gil-Humanes, Javier; Barro, Francisco; Brants, Ivo; De Prado, Rafael

    2012-09-01

    The resistance mechanism of a glyphosate-resistant Lolium multiflorum Lam. biotype collected in Córdoba (Southern Spain) was examined. Resistance Factor values at three different growth stages ranged between 4.77 and 4.91. At 96 hours after treatment (HAT) the S biotype had accumulated seven times more shikimic acid than the R biotype. There were significant differences in translocation of (14)C-glyphosate between biotypes, i.e. at 96 HAT, the R biotype accumulated in the treated leaf more than 70% of the absorbed herbicide, in comparison with 59.21% of the S biotype; the R biotype translocated only 14.79% of the absorbed (14)C-glyphosate to roots, while in the S population this value was 24.79%. Visualization of (14)C-glyphosate by phosphor imaging showed a reduced distribution in the R biotype compared with the S. Glyphosate metabolism was not involved in the resistance mechanism due to both biotypes showing similar values of glyphosate at 96 HAT. Comparison of the EPSPS gene sequences between biotypes indicated that the R biotype has a proline 182 to serine amino acid substitution. In short, the resistance mechanism of the L. multiflorum Lam. biotype is due to an impaired translocation of the herbicide and an altered target site.

  15. Multilocus sequence typing of Cronobacter sakazakii and Cronobacter malonaticus reveals stable clonal structures with clinical significance which do not correlate with biotypes

    Directory of Open Access Journals (Sweden)

    Manning Georgina

    2009-10-01

    Full Text Available Abstract Background The Cronobacter genus (Enterobacter sakazakii has come to prominence due to its association with infant infections, and the ingestion of contaminated reconstituted infant formula. C. sakazakii and C. malonaticus are closely related, and are defined according their biotype. Due to the ubiquitous nature of the organism, and the high severity of infection for the immunocompromised, a multilocus sequence typing (MLST scheme has been developed for the fast and reliable identification and discrimination of C. sakazakii and C. malonaticus strains. It was applied to 60 strains of C. sakazakii and 16 strains of C. malonaticus, including the index strains used to define the biotypes. The strains were from clinical and non-clinical sources between 1951 and 2008 in USA, Canada, Europe, New Zealand and the Far East. Results This scheme uses 7 loci; atpD, fusA, glnS, gltB, gyrB, infB, and pps. There were 12 sequence types (ST identified in C. sakazakii, and 3 in C. malonaticus. A third (22/60 of C. sakazakii strains were in ST4, which had almost equal numbers of clinical and infant formula isolates from 1951 to 2008. ST8 may represent a particularly virulent grouping of C. sakazakii as 7/8 strains were clinical in origin which had been isolated between 1977 - 2006, from four countries. C. malonaticus divided into three STs. The previous Cronobacter biotyping scheme did not clearly correspond with STs nor with species. Conclusion In conclusion, MLST is a more robust means of identifying and discriminating between C. sakazakii and C. malonaticus than biotyping. The MLST database for these organisms is available online at http://pubmlst.org/cronobacter/.

  16. Phospholipase, proteinase and haemolytic activities of Candida albicans isolated from oral cavities of patients with type 2 diabetes mellitus

    OpenAIRE

    Tsang, CSP; Chu, FCS; Leung, WK; Jin, LJ; Samaranayake, LP; Siu, SC

    2007-01-01

    The aim of this study was to biotype and characterize phospholipase, proteinase and haemolytic activities of oral Candida albicans isolates from 210 Chinese patients with type 2 diabetes mellitus (DM) and 210 age- and sex-matched healthy controls. Seventy-six and 50 C. albicans isolates were obtained from type 2 DM patients and controls, respectively, using the oral rinse technique. The isolates were characterized with a biotyping system based on enzyme profiles, carbohydrate assimilation pat...

  17. Emergence of Tetracycline Resistant Vibrio cholerae O1 Biotype El Tor Serotype Ogawa with Classical ctxB Gene from a Cholera Outbreak in Odisha, Eastern India.

    Science.gov (United States)

    Jain, M; Kumar, P; Goel, A K

    2016-01-01

    In September 2010, a cholera outbreak was reported from Odisha, Eastern India. V. cholerae isolated from the clinical samples were biochemically and serologically confirmed as serogroup O1, biotype El Tor, and serotype Ogawa. Multiplex PCR screening revealed the presence of various genes, namely, ompW, ctxB, zot, rfbO1, tcp, ace, hlyA, ompU, rtx, and toxR, in all of the isolates. The isolates were resistant to co-trimoxazole, nalidixic acid, polymyxin B, spectinomycin, streptomycin, sulfamethoxazole, tetracycline, trimethoprim, and vibriostatic agent 2,4-diamino-6,7-diisopropylpteridine (O/129). Minimum inhibitory concentration of tetracycline decreased in the presence of carbonyl cyanide m-chlorophenylhydrazone (CCCP), suggesting the involvement of efflux pumps. PCR analysis confirmed the presence of class I integrons as well as SXT elements harbouring antibiotic resistance genes in all isolates. Sequencing revealed the presence of ctxB gene of classical biotype in all the isolates. The isolates harboured an RS1-CTX prophage array with El Tor type rstR and classical ctxB on the large chromosome. The study indicated that the V. cholerae El Tor variants are evolving in the area with better antibiotic resistance and virulence potential.

  18. Emergence of Tetracycline Resistant Vibrio cholerae O1 Biotype El Tor Serotype Ogawa with Classical ctxB Gene from a Cholera Outbreak in Odisha, Eastern India.

    Science.gov (United States)

    Jain, M; Kumar, P; Goel, A K

    2016-01-01

    In September 2010, a cholera outbreak was reported from Odisha, Eastern India. V. cholerae isolated from the clinical samples were biochemically and serologically confirmed as serogroup O1, biotype El Tor, and serotype Ogawa. Multiplex PCR screening revealed the presence of various genes, namely, ompW, ctxB, zot, rfbO1, tcp, ace, hlyA, ompU, rtx, and toxR, in all of the isolates. The isolates were resistant to co-trimoxazole, nalidixic acid, polymyxin B, spectinomycin, streptomycin, sulfamethoxazole, tetracycline, trimethoprim, and vibriostatic agent 2,4-diamino-6,7-diisopropylpteridine (O/129). Minimum inhibitory concentration of tetracycline decreased in the presence of carbonyl cyanide m-chlorophenylhydrazone (CCCP), suggesting the involvement of efflux pumps. PCR analysis confirmed the presence of class I integrons as well as SXT elements harbouring antibiotic resistance genes in all isolates. Sequencing revealed the presence of ctxB gene of classical biotype in all the isolates. The isolates harboured an RS1-CTX prophage array with El Tor type rstR and classical ctxB on the large chromosome. The study indicated that the V. cholerae El Tor variants are evolving in the area with better antibiotic resistance and virulence potential. PMID:26881083

  19. Polymorphisms in salivary-gland transcripts of Russian wheat aphid biotypes 1 and 2

    Institute of Scientific and Technical Information of China (English)

    Feng Cui; C.Michael Smith; John Reese; Owain Edwards; Gerald Reeck

    2012-01-01

    The Russian wheat aphid (RWA),Diuraphis noxia (Mordvilko) (Homoptera:Aphididae),is a major pest of small grains.As with plant-feeding aphids in general,the interaction between RWA and host plants is governed,on the insect side,by proteins and enzymes in saliva.In this work,we examined sequence variations in transcripts encoding proteins and enzymes of RWA salivary glands.We conducted reverse transcription - polymerase chain reaction in RWA biotypes 1 and 2 using primers derived from pea aphid orthoiogs,and cloned regions of 17 putative salivary gland transcripts.For four of the transcripts,we observed no difference in sequences between the two biotypes.For the other 13 transcripts,for example,the transcripts encoding sucrase,trehalase and protein C002,large amount of variations,both within each biotype and between the two biotypes,were observed.Usually the two biotypes shared only one variant,which was typically the most common variant in both biotypes.Most of the transcripts had more non-synonymous than synonymous codon changes among their variants.Our results offer possible molecular markers for distinguishing the two biotypes and insights into their evolution.

  20. Isolation and survival of Yersinia enterocolitica in ice cream at different pH values, stored at -18°c

    OpenAIRE

    Pederiva Norma B. Barbini de; Guzmán Ana M. Stefanini de

    2000-01-01

    The presence of Yersinia enterocolitica was investigated in 203 samples of industrial (123) and non-industrial ice cream (80). Two Y. enterocolitica strains were isolated from non-industrial ice cream, which suggests the possibility of post-manufacturing contamination. One strain was typed as B:1A, O: 3,50,51; lis Xz, while the other one was biotyped as: B:1A but not serologically typed. Survival of Y. enterocolitica was investigated by inoculating nine samples of industrially manufactured ic...

  1. FolR1: a novel cell surface marker for isolating midbrain dopamine neural progenitors and nascent dopamine neurons

    Science.gov (United States)

    Gennet, Nicole; Tamburini, Claudia; Nan, Xinsheng; Li, Meng

    2016-01-01

    Cell type-specific surface markers offer a powerful tool for purifying defined cell types for restorative therapies and drug screenings. Midbrain dopaminergic neurons (mesDA) are the nerve cells preferentially lost in the brains of Parkinson’s disease patients. Clinical trials of transplantation of fetal neural precursors suggest that cell therapy may offer a cure for this devastating neurological disease. Many lines of preclinical studies demonstrate that neural progenitors committed to dopaminergic fate survive and integrate better than postmitotic DA neurons. We show that the folate-receptor 1 (FolR1), a GPI-anchored cell surface molecule, specifically marks mesDA neural progenitors and immature mesDA neurons. FolR1 expression superimposes with Lmx1a, a bona-fide mesDA lineage marker, during the active phase of mesDA neurogenesis from E9.5 to E14.5 during mouse development, as well as in ESC-derived mesDA lineage. FolR1+ neural progenitors can be isolated by FACS or magnetic sorting (MAC) which give rise to dopamine neurons expressing TH and Pitx3, whilst FolR1 negative cells generate non-dopaminergic neurons and glia cells. This study identifies FolR1 as a new cell surface marker selectively expressed in mesDA progenitors in vivo and in vitro and that can be used to enrich in vitro differentiated TH neurons. PMID:27580818

  2. FolR1: a novel cell surface marker for isolating midbrain dopamine neural progenitors and nascent dopamine neurons.

    Science.gov (United States)

    Gennet, Nicole; Tamburini, Claudia; Nan, Xinsheng; Li, Meng

    2016-01-01

    Cell type-specific surface markers offer a powerful tool for purifying defined cell types for restorative therapies and drug screenings. Midbrain dopaminergic neurons (mesDA) are the nerve cells preferentially lost in the brains of Parkinson's disease patients. Clinical trials of transplantation of fetal neural precursors suggest that cell therapy may offer a cure for this devastating neurological disease. Many lines of preclinical studies demonstrate that neural progenitors committed to dopaminergic fate survive and integrate better than postmitotic DA neurons. We show that the folate-receptor 1 (FolR1), a GPI-anchored cell surface molecule, specifically marks mesDA neural progenitors and immature mesDA neurons. FolR1 expression superimposes with Lmx1a, a bona-fide mesDA lineage marker, during the active phase of mesDA neurogenesis from E9.5 to E14.5 during mouse development, as well as in ESC-derived mesDA lineage. FolR1(+) neural progenitors can be isolated by FACS or magnetic sorting (MAC) which give rise to dopamine neurons expressing TH and Pitx3, whilst FolR1 negative cells generate non-dopaminergic neurons and glia cells. This study identifies FolR1 as a new cell surface marker selectively expressed in mesDA progenitors in vivo and in vitro and that can be used to enrich in vitro differentiated TH neurons. PMID:27580818

  3. The El Tor Biotype of Vibrio cholerae Exhibits a Growth Advantage in the Stationary Phase in Mixed Cultures with the Classical Biotype▿

    OpenAIRE

    Pradhan, Subhra; Baidya, Amit K.; Ghosh, Amalendu; Paul, Kalidas; Chowdhury, Rukhsana

    2009-01-01

    Vibrio cholerae strains of the O1 serogroup that typically cause epidemic cholera can be classified into two biotypes, classical and El Tor. The El Tor biotype emerged in 1961 and subsequently displaced the classical biotype as a cause of cholera throughout the world. In this study we demonstrate that when strains of the El Tor and classical biotypes were cocultured in standard LB medium, the El Tor strains clearly had a competitive growth advantage over the classical biotype starting from th...

  4. Changes in the Russian Wheat Aphid (Hemiptera: Aphididae) Biotype Complex in South Africa.

    Science.gov (United States)

    Jankielsohn, Astrid

    2016-04-01

    Russian wheat aphid Diuraphis noxia (Kurdjumov) has spread from its native area in central Asia to all the major wheat-producing countries in the world to become an international wheat pest. Because the Russian wheat aphid is a serious threat to the wheat industry in South Africa, it is important to investigate the key factors involved in the distribution of Russian wheat aphid biotypes and in the changes of the Russian wheat aphid biotype complex in South Africa. There are currently four known Russian wheat aphid biotypes occurring in South Africa. Russian wheat aphid samples were collected from 2011 to 2014 during the wheat-growing season in spring and summer and these samples were screened to determine the biotype status. RWASA1 occurred predominantly in the Western Cape, while RWASA2 and RWASA3 occurred predominantly in the Eastern Free State. Following the first record of RWASA4 in 2011, this biotype was restricted to the Eastern Free State. The surveys suggest that the Russian wheat aphid bioype complex was more diverse in the Eastern Free State than in the other wheat production areas. There was also a shift in Russian wheat aphid biotype composition over time. The Russian wheat aphid biotype complex is dynamic, influenced by environmental factors such as host plants, altitude, and climate, and it can change and diversify over time causing fluctuation in populations over sites and years. This dynamic nature of the Russian wheat aphid will continue to challenge the development of Russian wheat aphid-resistant wheat cultivars in South Africa, and the continued monitoring of the biotypic and genetic structure, to determine genetic relatedness and variation in different biotypes, of Russian wheat aphid populations is important for protecting wheat.

  5. Changes in the Russian Wheat Aphid (Hemiptera: Aphididae) Biotype Complex in South Africa.

    Science.gov (United States)

    Jankielsohn, Astrid

    2016-04-01

    Russian wheat aphid Diuraphis noxia (Kurdjumov) has spread from its native area in central Asia to all the major wheat-producing countries in the world to become an international wheat pest. Because the Russian wheat aphid is a serious threat to the wheat industry in South Africa, it is important to investigate the key factors involved in the distribution of Russian wheat aphid biotypes and in the changes of the Russian wheat aphid biotype complex in South Africa. There are currently four known Russian wheat aphid biotypes occurring in South Africa. Russian wheat aphid samples were collected from 2011 to 2014 during the wheat-growing season in spring and summer and these samples were screened to determine the biotype status. RWASA1 occurred predominantly in the Western Cape, while RWASA2 and RWASA3 occurred predominantly in the Eastern Free State. Following the first record of RWASA4 in 2011, this biotype was restricted to the Eastern Free State. The surveys suggest that the Russian wheat aphid bioype complex was more diverse in the Eastern Free State than in the other wheat production areas. There was also a shift in Russian wheat aphid biotype composition over time. The Russian wheat aphid biotype complex is dynamic, influenced by environmental factors such as host plants, altitude, and climate, and it can change and diversify over time causing fluctuation in populations over sites and years. This dynamic nature of the Russian wheat aphid will continue to challenge the development of Russian wheat aphid-resistant wheat cultivars in South Africa, and the continued monitoring of the biotypic and genetic structure, to determine genetic relatedness and variation in different biotypes, of Russian wheat aphid populations is important for protecting wheat. PMID:26803815

  6. Proteins of bovine viral diarrhea virus: characterization, biotype-specific differences, and immunological properties

    Energy Technology Data Exchange (ETDEWEB)

    Donis, R.O.

    1987-01-01

    Virus-specific polypeptides in bovine viral diarrhea-mucosal disease (BVD) virus-infected bovine cells were studied by radiolabeling. A total of 12 polypeptides with apparent Mr of 165, 135, 118, 80, 75, 62, 56-58, 48, 37, 32, 25 and 19 kilodaltons (k) were identified in infected cells. Five glycoproteins were detected in infected cells. Two abundant species had apparent Mr of 48 k and 56-58 k while the minor species had masses of 118, 75 and 65 k. When cells were radiolabeled with L-(/sup 35/S)-methionine in the presence of tunicamycin the 56-58 k migrated with apparent masses of 54 k and 48-50 K in PAGE. Endoglycosidase F digestion of virus-induced polypeptides caused a 4-6 K reduction in the apparent molecular mass of the 56-58 k yielding a 52 k digested product. Tunicamycin caused a drastic reduction in the yield of infectious virus indicating that the carbohydrate moieties serve a vital role in the infection cycle of BVD virus. The noncytopathic biotype BVD (NCB-BVD) virus isolates can be consistently differentiated from cytopathic biotype BVD (CB-BVD) isolates on the basis of unique polypeptide profiles they induce in the infected cell: the most abundant polypeptide in CB-BVD infected cells is the 80 kD polypeptide while NCB-BVD lack this polypeptide and induce a predominant 118 k polypeptide. A panel of 25 murine monoclonal antibodies (Mabs) against the two major glycoproteins of BVD virus was produced. Based on their viral polypeptide specificity and on their ability to neutralize viral infectivity the Mabs in the panel were divided into 3 classes: Class 1 Mabs reacted with the 56-58 k glycoprotein and neutralized the virus, Class 2 Mabs recognized the 56-58 k glycoprotein but were not neutralizing and Class 3 Mabs reacted with the 48 k glycoprotein and did not neutralize the virus. These results identify the 56-58 k as one of the envelope glycoproteins of BVD virus.

  7. Proteins of bovine viral diarrhea virus: characterization, biotype-specific differences, and immunological properties

    International Nuclear Information System (INIS)

    Virus-specific polypeptides in bovine viral diarrhea-mucosal disease (BVD) virus-infected bovine cells were studied by radiolabeling. A total of 12 polypeptides with apparent Mr of 165, 135, 118, 80, 75, 62, 56-58, 48, 37, 32, 25 and 19 kilodaltons (k) were identified in infected cells. Five glycoproteins were detected in infected cells. Two abundant species had apparent Mr of 48 k and 56-58 k while the minor species had masses of 118, 75 and 65 k. When cells were radiolabeled with L-[35S]-methionine in the presence of tunicamycin the 56-58 k migrated with apparent masses of 54 k and 48-50 K in PAGE. Endoglycosidase F digestion of virus-induced polypeptides caused a 4-6 K reduction in the apparent molecular mass of the 56-58 k yielding a 52 k digested product. Tunicamycin caused a drastic reduction in the yield of infectious virus indicating that the carbohydrate moieties serve a vital role in the infection cycle of BVD virus. The noncytopathic biotype BVD (NCB-BVD) virus isolates can be consistently differentiated from cytopathic biotype BVD (CB-BVD) isolates on the basis of unique polypeptide profiles they induce in the infected cell: the most abundant polypeptide in CB-BVD infected cells is the 80 kD polypeptide while NCB-BVD lack this polypeptide and induce a predominant 118 k polypeptide. A panel of 25 murine monoclonal antibodies (Mabs) against the two major glycoproteins of BVD virus was produced. Based on their viral polypeptide specificity and on their ability to neutralize viral infectivity the Mabs in the panel were divided into 3 classes: Class 1 Mabs reacted with the 56-58 k glycoprotein and neutralized the virus, Class 2 Mabs recognized the 56-58 k glycoprotein but were not neutralizing and Class 3 Mabs reacted with the 48 k glycoprotein and did not neutralize the virus. These results identify the 56-58 k as one of the envelope glycoproteins of BVD virus

  8. Gardnerella vaginalis isolated from patients with bacterial vaginosis and from patients with healthy vaginal ecosystems.

    Science.gov (United States)

    Aroutcheva, A A; Simoes, J A; Behbakht, K; Faro, S

    2001-10-01

    The differences in the phenotype and genotype of Gardnerella vaginalis isolates from patients with bacterial vaginosis (BV) and from patients without BV are unknown. In our study, 43 isolates of G. vaginalis were examined for biotype (hippurate hydrolysis, lipase, and beta-galactosidase activity), sensitivity to metronidazole, and genotype. Of the 117 women visiting the gynecology clinic at Rush-Presbyterian-St. Luke's Medical Center who were included in the study, 27.4% were found to have BV. G. vaginalis was found in samples from 87.5% of women with BV, from 34.0% of women with intermediate BV, and from 26.4% of women with healthy vaginal ecosystems. Among patients with G. vaginalis, biotypes 7 and 8 were isolated from 32% and 20% of patients, respectively. Biotype 5 was predominantly associated with a healthy vaginal ecosystem (P=.0004). Biotypes 5 and 7 were the most resistant to metronidazole. No specific phenotype or genotype of G. vaginalis causes BV.

  9. Dominant inheritance of isolated hypermethioninemia is associated with a mutation in the human methionine adenosyltransferase 1A gene

    Energy Technology Data Exchange (ETDEWEB)

    Chamberlin, M.E.; Ubagai, Tsuneyuki; Chou, J.Yang [National Inst. of Child Health and Human Development, Bethesda, MD (United States)] [and others

    1997-03-01

    Methionine adenosyltransferase (MAT) I/III deficiency, characterized by isolated persistent hypermethioninemia, is caused by mutations in the MAT1A gene encoding MAT{alpha}1, the subunit of major hepatic enzymes MAT I ([{alpha}1]{sub 4}) and III ([{alpha}1]{sub 2}). We have characterized 10 MAT1A mutations in MAT I/III-deficient individuals and shown that the associated hypermethioninemic phenotype was inherited as an autosomal recessive trait. However, dominant inheritance of hypermethioninemia, also hypothesized to be caused by MAT MU deficiency, has been reported in two families. Here we show that the only mutation uncovered in one of these families, G, is a G{r_arrow}A transition at nt 791 in exon VII of one MAT1A allele that converts an arginine at position 264 to a histidine (R264H). This single allelic R264H mutation was subsequently identified in two hypermethioninemic individuals in an additional family, C. Family C members were also found to inherit hypermethioninemia in a dominant fashion, and the available affected members analyzed carried the single allelic R264H mutation. Substitution of R-264 with histidine (R264H, the naturally occurring mutant), leucine (R264L), aspartic acid (R264D), or glutamic acid (R264E) greatly reduced MAT activity and severely impaired the ability of the MAT{alpha}1 subunits to form homodimers essential for optimal catalytic activity. On the other hand, when lysine was substituted for R-264 (R264K), the mutant {alpha}1 subunit was able to form dimers that retain significant MAT activity, suggesting that amino acid 264 is involved in intersubunit salt-bridge formation. Cotransfection studies show that R264/R264H MAT{alpha}1 heterodimers are enzymatically inactive, thus providing an explanation for the R264H-mediated dominant inheritance of hypermethioninernia. 23 refs., 4 figs., 2 tabs.

  10. Triazine Resistance in Senecio vulgaris Parental and Nearly Isonuclear Backcrossed Biotypes Is Correlated with Reduced Productivity 1

    Science.gov (United States)

    McCloskey, William B.; Holt, Jodie S.

    1990-01-01

    Isonuclear triazine-susceptible and triazine-resistant Senecio vulgaris L. biotypes were developed by making reciprocal crosses between susceptible and resistant biotypes to obtain F1 hybrids and backcrossing the hybrids to the appropriate pollen parent. The electrophoretic isozyme patterns of the enzyme aconitase obtained from leaf extracts of triazine-susceptible parental (S) and backcrossed (S×RBC6) biotypes, and triazine-resistant parental (R) and backcrossed (R×SBC6) biotypes verified that the biotypes had the expected nuclear genomes. Atrazine inhibition of chloroplast whole chain electron transport from water to methyl viologen was measured to verify susceptibility or resistance to triazine herbicides. The photosynthetic rate and biomass accumulation of greenhouse grown susceptible and resistant S. vulgaris biotypes were measured 28, 35, 42, 50, 57, and 64 days after planting to determine the effect of altered chloroplast function. S and S×RBC6 biotypes had CO2 assimilation rates of 16.2 and 16.6 micromoles CO2 per square meter per second, respectively, and I50 values (herbicide concentration producing 50% inhibition) of about 0.49 micromolar atrazine. The corresponding values for the R and R×SBC6 biotypes were 14.7 and 14.6 micromoles CO2 per square meter per second with I50 values of 65.0 micromolar atrazine. The S biotype was larger and more productive than the R biotype at all harvests. At the harvest 57 days after planting, mean shoot dry weight was 33.2 and 8.7 grams for the S and R biotypes, respectively. The growth effect associated with chloroplast differences was shown in comparisons of the S biotype with the R×SBC6 biotype and of the S×RBC6 biotype with the R biotype. The R×SBC6 biotype had 72% of the shoot dry weight of the S biotype while the R biotype had 55% of the shoot dry weight of the S×RBC6 biotype. The R×SBC6 and R biotypes produced about 73 and 62% of the leaf area of the S and S×RBC6 biotypes, respectively. Relative growth

  11. Characterization of a Novel Mesophilic Bacterial Amylase Secreted by ZW2531-1,a Strain Newly Isolated from Soil

    Institute of Scientific and Technical Information of China (English)

    WANG Yang; LI Fan; GAO Chao-hui; ZHANG Ying-Jiu

    2009-01-01

    A novel mesophilic bacterial amylase,named oligosaccharide-producing multifunctional amylase(OPMA),was discovered and characterized.OPMA is an extracellular enzyme secreted by ZW2531-1,a strain newly isolated from Chinese soil.It could be purified to homogeneity from the culture supematant of ZW2531-1 by 30%-60% saturated ammonium sulfate precipitation,followed by twice Sephadex gel filtration chromatography.OPMA is a 66 kDa protein based on SDS-PAGE and has an isoelectric point(p/) at pH=5.3 by Isoelectric focusing electrophoresis(IFE),it only catalyzes the degradation of starch,rather than other alpha-1,4-and/or 1,6-glucan polysaccharides such as β-cyclomaltodextrin and pullulan.OPMA degraded starch to produce several oligosccharides including maltose,maltotriose,and isomaltotriose as the major end-products,and perhaps other oligosaccharides such as isomaltotetraose,rather than glucose.OPMA exhibited optimal catalytic activity at a reaction temperature of 50 ℃ and pH=6.0,as determined by orthogonal test.Under the optimal reaction conditions,purified OPMA had a specific activity of 13.75 U/mg.These findings suggest that OPMA could be used for the production of some oligosaccharides beneficial to the food industry and medicine.

  12. Comparison of virulence of different Actinobacillus pleuropneumoniae serotypes and biotypes using an aerosol infection model

    DEFF Research Database (Denmark)

    Jacobsen, Mariann Juul; Nielsen, Jens Peter; Nielsen, Ragnhild

    1996-01-01

    An aerosol infection model for inoculation of pigs with Actinobacillus pleuropneumoniae is described, With this model the virulence of three A. pleuropneumoniae biotype 1 strains representing serotypes 2, 5b and 6, and one Danish biotype 2 were compared using 13-week-old pigs for inoculation....... The pigs were sacrificed 24 h after aerosol exposure and lung lesions were evaluated. In pigs exposed to aerosols of suspensions containing 10(4) CFU/ml of serotypes 2, 5b and 6, a number of 5-10 lesions of haemorrhagic necrotizing pneumonia were induced, For the biotype 2 strain the dose creating similar...... lesions was 10(9) CFU/ml. Repeated experiments confirmed these results showing similar virulence of serotypes 2, 5b and 6 whereas the biotype 2 strain proved less virulent, The aerosol infection model allowed a comparison of the number of A. pleuropneumoniae CFU/liter air which were necessary to induce...

  13. Clinical Considerations on the Root Coverage of Gingival Recessions in Thin or Thick Biotype.

    Science.gov (United States)

    Kahn, Sergio; Almeida, Renato Alves da Rocha; Dias, Alexandra Tavares; Rodrigues, Walmir Júnior; Barceleiro, Marcos Oliveira; Taba, Mario

    2016-01-01

    Gingival biotype is a clinical term used to describe the thickness of the gingiva. It has been classified as being thick or thin and may be related to the clinical outcome of root coverage procedures. This study evaluated the impact of gingival biotype on the clinical outcome of root coverage procedures following subepithelial connective tissue graft plus coronally positioned flap. A total of 19 patients, 10 with thin and 9 with thick gingival biotype, were treated for localized Miller Class I or II gingival recessions. After 6 months, 14 patients achieved complete root coverage, 7 from each group. The overall mean pooled root coverage rate was 90.93%. The thin biotype cases yielded a reduced mean root coverage of 88.51% compared with 93.63% for patients who had the thick biotype classification. Although the thin gingival biotype may impair the clinical outcome of root coverage procedures, this limitation does not appear to have a strong influence on the success of the root coverage therapy when subepithelial connective tissue graft was associated with the coronal positioning of the flap.

  14. Hybridization between Dactylopius tomentosus (Hemiptera: Dactylopiidae) biotypes and its effects on host specificity.

    Science.gov (United States)

    Mathenge, C W; Holford, P; Hoffmann, J H; Zimmermann, H G; Spooner-Hart, R N; Beattie, G A C

    2010-06-01

    Dactylopius tomentosus is composed of biotypes adapted to different Cylindropuntia species. One biotype is an important biological control agent of C. imbricata in South Africa while another has the potential for the control of C. fulgida var. fulgida. These two weed species occur in sympatry in some areas of South Africa, so the introduction of the second biotype could result in hybridization, which, in turn, could impact on the biological control programs through altered host specificity and fitness of the hybrids. To anticipate what might happen, reciprocal crosses were made between the two biotypes, and the biological performance of the resultant hybrids was compared with that of each parental lineage on C. imbricata and C. f. var. fulgida. The biotypes interbred freely and reciprocally in the laboratory. Comparisons of crawler and adult female traits showed differences in performance that were dependent on the origin of the maternal and paternal genomes. However, when all traits were combined into a 'fitness index', both hybrids clearly outperformed the parental lineages. The increase in fitness shown by the hybrids over their maternal lineage was greater on the alternative host of the maternal parent than on the natural host of the maternal parent. Therefore, in areas where the two cacti occur in sympatry, hybridization between the biotypes is not expected to be detrimental to the biological control of either weed. PMID:20074385

  15. Clinical Considerations on the Root Coverage of Gingival Recessions in Thin or Thick Biotype.

    Science.gov (United States)

    Kahn, Sergio; Almeida, Renato Alves da Rocha; Dias, Alexandra Tavares; Rodrigues, Walmir Júnior; Barceleiro, Marcos Oliveira; Taba, Mario

    2016-01-01

    Gingival biotype is a clinical term used to describe the thickness of the gingiva. It has been classified as being thick or thin and may be related to the clinical outcome of root coverage procedures. This study evaluated the impact of gingival biotype on the clinical outcome of root coverage procedures following subepithelial connective tissue graft plus coronally positioned flap. A total of 19 patients, 10 with thin and 9 with thick gingival biotype, were treated for localized Miller Class I or II gingival recessions. After 6 months, 14 patients achieved complete root coverage, 7 from each group. The overall mean pooled root coverage rate was 90.93%. The thin biotype cases yielded a reduced mean root coverage of 88.51% compared with 93.63% for patients who had the thick biotype classification. Although the thin gingival biotype may impair the clinical outcome of root coverage procedures, this limitation does not appear to have a strong influence on the success of the root coverage therapy when subepithelial connective tissue graft was associated with the coronal positioning of the flap. PMID:27100811

  16. Vaccine Induced Specific Protection Against Enteric Red Mouth Disease (ERM) Caused by Yersinia Ruckeri Serotype 1 Biotype 2

    DEFF Research Database (Denmark)

    Deshmukh, Sidharta; Raida, Martin K.; Dalsgaard, Inger;

    2011-01-01

    In European fish farms there is evidence of enteric red mouth disease (ERM) outbreaks in previously vaccinated farmed fish. It has been suggested that the occurrence of a Yersinia ruckeri variant (biotype 2) may explain this situation. Recent development of commercial vaccines has included both...... biotype 1 and 2. In this study, the specificity of immune protection extended by three commercial vaccines viz; AQUAVAC ERM® Intervet Schering Plough (based on biotype 1 only), ERMOGEN VET® Novartis (based on biotype 1 only) and AQUAVAC RELERA® Intervet Schering Plough (based on both biotype 1and 2......) developed against ERM was investigated following intraperitoneal (IP) challenge with Yersinia ruckeri serotype1 biotype 2. Fish were immersion vaccinated for 30 s and challenged 2, 4 and 6 months post vaccination. The onset and severity of various pathological lesions along with their disappearance during...

  17. Two non-target mechanisms are involved in glyphosate-resistant horseweed (Conyza canadensis L. Cronq.) biotypes.

    Science.gov (United States)

    González-Torralva, Fidel; Rojano-Delgado, Antonia M; Luque de Castro, María D; Mülleder, Norbert; De Prado, Rafael

    2012-11-15

    The physiological and biochemical bases for glyphosate resistance and susceptibility in horseweed (Conyza canadensis L. Cronq.) populations collected from Córdoba, Huelva, Málaga, Jaén and Seville in southern Spain were investigated. Screening 25 populations treated with glyphosate (238gacidequivalentha(-1)) at the rosette stage (BBCH 14-15) revealed reductions in fresh weight (fw) of 9-99%. The resistant biotype (R C004) was 6.1 times more resistant than the susceptible biotype (S). Shikimate accumulation in both biotypes increased until 72h after treatment (HAT), and then continued to increase (to 61.2%) in the S biotype, but decreased by 40% in the R (C004) biotype. Differential glyphosate spray retention and foliar uptake of applied (14)C-glyphosate between the R (C004) and S biotype had no effect on resistance to this herbicide. Quantitative and qualitative tests showed greater (14)C-glyphosate mobility in the S biotype than in the R (C004) biotype. Glyphosate was metabolized faster in the R (C004) biotype than in the S biotype. The herbicide disappeared completely from the R (C004) biotype by conversion into glyoxylate, sarcosine and aminomethylphosphonic acid within 96 HAT. On the other hand, 41.43nmolg(-1)fw of all glyphosate applied remained in the S biotype and glyoxylate was its only non-toxic metabolite. These results suggest that glyphosate resistance in horseweed is due to two different non-target mechanisms, namely: (a) impaired glyphosate translocation and (b) glyphosate metabolism to other compounds.

  18. Predominant porB1A and porB1B genotypes and correlation of gene mutations with drug resistance in Neisseria gonorrhoeae isolates in Eastern China

    Directory of Open Access Journals (Sweden)

    Tang Renxian

    2010-11-01

    Full Text Available Abstract Background Variations of porB1A and porB1B genes and their serotypes exist in Neisseria gonorrhoeae isolates from different geographical areas, and some site mutations in the porB1B gene correlate with drug resistance. Methods The β-lactamase production of N. gonorrhoeae isolates was determined by paper acidometric test and nitrocefin discs. The porB1A and porB1B genes of 315 non-penicillinase-producting N. gonorrhoeae (non-PPNG strains were amplified by PCR for sequencing to determine serotypes and site mutations. A duplex PCR was designed to simultaneously detect both porB1A and porB1B genes. Penicillin and tetracycline resistance was assessed by an in vitro drug sensitivity test. Results Of the N. gonorrhoeae isolates, 31.1% tested positive for porB1A and 68.9% for porB1B genes. All the 98 porB1A+ isolates belonging to IA6 serotype with either no mutation at the 120 and 121 sites (88.8% or a D120G (11.2% mutation and were no resistance to both penicillin and tetracycline. Among the 217 porB1B+ isolates, 26.7%, 22.6% and 11.5% belonged to IB3, IB3/6 and IB4 serotypes, respectively. Particularly, two novel chimeric serotypes, IB3/6-IB2 and IB2-IB4-IB2, were found in 77 and 8 porB1B+ isolates. Two hundred and twelve (97.7% of the porB1B+ isolates were presented G120 and/or A121 mutations with 163 (76.9% at both sites. Interestingly, within the 77 porB1B+ isolates belonging to IB3/6-IB2 serotype, 15 were discovered to possess novel deletions at both A121 and N122 sites. All the replacement mutations at these sites in PorB1B were correlated with resistance and the deletion mutation showed the highest resistance. Conclusion N. gonorrhoeae isolates circulating in Eastern China include a sole PorB1A serotype (IA6 and five PorB1B serotypes. Multiple mutations in porB1B genes, including novel A121 and N122 deletions, are correlated with high levels of penicillin and tetracycline resistance.

  19. Effects of host, temperature and relative humidity on competitive displacement of two invasive Bemisia tabaci biotypes [Q and B

    Institute of Scientific and Technical Information of China (English)

    Dong Chu; Yun-Li Tao; You-Jun Zhang; Fang-Hao Wan; Judith K Brown

    2012-01-01

    Bemisia tabaci shifted unexpectedly in China from a predominance of B biotype to Q biotype during 2005-2008.This observation stimulated an interest in investigating whether environmental factors,including host,temperature and relative humidity (RH) could possibly explain the observed shift in biotypes distribution.Results indicated that all three parameters examined influenced biotype survivability.The percentage of B biotype,when reared together on pepper plants with the Q biotype,decreased significantly from 66.7% in the founder population,to 13.6% and 3.7% in the first and second generations,respectively.When the B (founder at 66.7%) and Q (founder at 33.3%) biotypes were reared together on eggplant alone,or on pepper-plus-eggplant combination,the population size of the B biotype either remained constant,or increased somewhat in the first and second generations.On eggplant,the effects of RH and temperature on the competitiveness between the Q and B biotypes (3 pairs of Q and 6 pairs of B) were not significant.

  20. Potent and rapid antigonococcal activity of the venom peptide BmKn2 and its derivatives against different Maldi biotype of multidrug-resistant Neisseria gonorrhoeae.

    Science.gov (United States)

    Arpornsuwan, Teerakul; Buasakul, Brisana; Jaresitthikunchai, Janthima; Roytrakul, Sittiruk

    2014-03-01

    The emergence of multidrug-resistant strains of Neisseria gonorrhoeae constitutes a serious threat to public health and necessitates the discovery of new types of antimicrobial agents. Among the 18 clinical isolates of N. gonorrhoeae with susceptible to spectinomycin, ceftriaxone and cefixime, 14 isolates were resistance to penicillin, tetracycline and ciprofloxacin, while 2 isolates were susceptible to tetracycline and another was penicillin intermediate isolate. Significant differences between laboratory strain and multidrug resistant strains were revealed by means of matrix-assisted laser desorption/ionization time-of-flight mass spectrometry profiling and bioinformatics examination using the MALDI BioTyper software. However, Maldi Biotyper was not successfully separated ciprofloxacin-penicillin resistance and ciprofloxacin-tetracycline resistance from ciprofloxacin-penicillin-tetracycline resistant N. gonorrhoeae isolates. BmKn2 is a basic, alpha-helical peptide with no disulfide-bridge venom peptides that was first isolated from Buthus martensii Kasch. A panel of BmKn2 scorpion venom peptide and its derivatives of varying length and characteristics were synthesized chemically and evaluated for their ability to inhibit the growth of clinical N. gonorrhoeae isolates. Synthetic BmKn2 displayed potent activity against 18 clinical isolates of N. gonorrhoeae with MIC50 values of 6.9-27.6 μM. BmKn2 exerted its antibacterial activity via a bactericidal mechanism. Cyclic BmKn1 did not show antigonococcal activity. Decreasing the cationicity and helix percentage at the C-terminus of BmKn2 reduced the potency against N. gonorrhoeae. Taken together, the BmKn1 peptide can be developed as a topical therapeutic agent for treating multidrug-resistant strains of N. gonorrhoeae infections. PMID:24184420

  1. Draft Genome Sequence of Bacillus sp. Strain NSP2.1, a Nonhalophilic Bacterium Isolated from the Salt Marsh of the Great Rann of Kutch, India

    Science.gov (United States)

    Pal, Kamal Krishna; Sherathia, Dharmesh; Dalsania, Trupti; Savsani, Kinjal; Patel, Ilaxi; Sukhadiya, Bhoomika; Mandaliya, Mona; Thomas, Manesh; Ghorai, Sucheta; Vanpariya, Sejal; Rupapara, Rupal; Rawal, Priya; Saxena, Anil Kumar

    2013-01-01

    The 5.52-Mbp draft genome sequence of Bacillus sp. strain NSP2.1, a nonhalophilic bacterium isolated from the salt marsh of the Great Rann of Kutch, India, is reported here. An analysis of the genome of this organism will facilitate the understanding of its survival in the salt marsh. PMID:24158559

  2. Draft Genome Sequence of Bacillus sp. Strain NSP9.1, a Moderately Halophilic Bacterium Isolated from the Salt Marsh of the Great Rann of Kutch, India

    Science.gov (United States)

    Pal, Kamal Krishna; Sherathia, Dharmesh; Dalsania, Trupti; Savsani, Kinjal; Patel, Ilaxi; Thomas, Manesh; Ghorai, Sucheta; Vanpariya, Sejal; Rupapara, Rupal; Rawal, Priya; Sukhadiya, Bhoomika; Mandaliya, Mona; Saxena, Anil Kumar

    2013-01-01

    We report the 4.52-Mbp draft genome sequence of Bacillus sp. strain NSP9.1, a moderately halophilic bacterium isolated from the salt marsh of the Great Rann of Kutch, India. Analysis of the genome of this organism will lead to a better understanding of the genes and metabolic pathways involved in imparting osmotolerance. PMID:24115550

  3. Comparative full genome analysis revealed E1: A226V shift in 2007 Indian Chikungunya virus isolates.

    Science.gov (United States)

    Santhosh, S R; Dash, P K; Parida, M M; Khan, M; Tiwari, M; Lakshmana Rao, P V

    2008-07-01

    The resurgence of Chikungunya virus (CHIKV) in the form of unprecedented explosive epidemic after a gap of 32 years in India is a point of major public health concern. In 2007 again there was outbreak in Kerala, India, affecting more than 25,000 cases with many reported mortalities. To understand the molecular basis of this high virulence and its implication in large-scale epidemic, a detailed systematic serological, virological and molecular investigation was undertaken with the epidemic samples of Kerala-2007. The comparative analysis of full genome sequence of Chikungunya virus isolate of 2007 with 2006 revealed three unique substitutions in structural and non-structural genes of 2007 isolate [two in E1 region (V14A and A226V) and one in Nsp1 (M184T)]. Our finding further substantiates the association of A226V shift in E1 gene with evolutionary success possibly due to adaptation in the mosquito vector with progression of epidemic, as observed in Reunion Island. This A226V shift which was absent in all 2006 Indian isolates, is found to be present in the four 2007 isolates, analysed in this study. These unique molecular features of the 2007 isolates with the progression of the epidemic from 2005 to 2007 demonstrate their high evolutionary and epidemic potential and thereby suggesting possible implication in higher magnitude and virulence of this outbreak. PMID:18384900

  4. [Endocrine obesity: bioelectric profiles (biotypes) detected in the body composition].

    Science.gov (United States)

    Miggiano, G A D; Petitti, T

    2004-09-01

    136 patients were selected (16 men and 120 women with non-specific menstrual disturbances) with a BMI (Body Mass Index) between 25 and 45 kg/m2, which were diagnosed with "disendocrinia" (GH deficit, hyperadrenocorticism, hypothyroidsm, hyperandrogenism, menstrual cycle disorders). The proposed approach, based on the visualization of the value distribution of the electric measures in different graphics, is able to immediately explain the bioelectric state of the individual's lean-mass. Subjects with hypothyroidism present, along with their overweight, less bio-conducting mass, with an altered fluid intra/extra-cellular distribution. Patients with hyperadrenocorticism show instead an hyperhydratation of the body mass, especially in the extracellular level. Patients with menstrual disorders (amenorrea, polycystic ovary syndrome, anovulatory cycle etc...) present a lean mass reduction (elevated Rs) and an increase of the intra-cellular compartment (elevated-Xc). Patients with hyper-androgenism (and hirsutism) show a characteristic bioelectric "pattern", with low Rs levels and high Xc levels. Subjects with GH deficit (men and women), has a trend of documenting bioelectric measures with lower lean mass and higher fat-mass. Different electric biotypes seem to characterize the body composition in the several endocrine disorders. PMID:15700636

  5. Bionomics of brown planthopper biotype 2 from field and greenhouse

    Institute of Scientific and Technical Information of China (English)

    2001-01-01

    Two biotype 2 populations of brown planthopper (BPH), Nilaparvata lugens stal, were used in this experiment. One was purified by determining the weight of honeydew excreted on susceptible rice variety TN1 and resistant rice varieties Mudgo (bearing resistant gene Bph1) and ASD7 (bearing resistant gene bph2) by female adult in paddy field in Guangxi Province, south China, and the other was obtained from greenhouse and continuously reared on rice resistant variety Mudgo in IRRI, Philippines. One newly hatched nymph was introduced into the test tube containing two 60 day old rice plants and cultured at 26± 1℃ , L∶ D =12 h∶ 12 h. Sixty replications were set up for each tested rice variety. The number and instar of nymphes were recorded every day. The body weight and honeydew excreted by female adult emerged within 24 h and 72 h, the number of eggs laid, and newly hatched nymph on different resistant rice varieties were measured. The hatchability, net reproductive rate, female adult nutritional indices such as relative growth rate (RGR)and efficiency of conversion of ingested food (ECI) were calculated.

  6. Rickettsia influences thermotolerance in the whitefly Bemisia tabaci B biotype

    Institute of Scientific and Technical Information of China (English)

    Marina Brumin; Svetlana Kontsedalov; Murad Ghanim

    2011-01-01

    The whitefly Bemisia tabaci harbors Portiera aleyrodidarum,an obligatory symbiotic bacterium,as well as several secondary symbionts,including Rickettsia,Hamiltonella,Wolbachia,Arsenophonus,Cardinium and Fritschea,the function of which is unknown.In Israel,Rickettsia is found in both the B and Q of B.tabaci biotypes,and while all other secondary symbionts are located in the bacteriomes,Rickettsia can occupy most of the body cavity of the insect.We tested whether Rickettsia influences the biology of B.tabaci and found that exposing a Rickettsia-containing population to increasing temperatures significantly increases its tolerance to heat shock that reached 40℃,compared to a Rickettsia-free population.This increase in tolerance to heat shock was not associated with specific induction of heat-shock protein gene expression; however,it was associated with eduction in Rickettsia numbers as was assessed by quantitative real-time polymerase chain reaction and fluorescence in situ hybridization analyses.To assess the causes for thermotolerance when ickettsia is reduced,we tested whether its presence is associated with the induction of genes required for thermotolerance.We found that under normal 25℃ rearing temperature,genes associated with response to stress such as cytoskeleton genes are induced in the Rickettsia-containing population.Thus,the presence of Rickettsia in B.tabaci under normal conditions induces the expression of genes required for thermotolerance that under high temperatures indirectly lead to this tolerance.

  7. Seed dormancy is modulated in recently evolved chlorsulfuron-resistant Turkish biotypes of wild mustard (Sinapis arvensis)

    Science.gov (United States)

    Topuz, Muhamet; Nemli, Yildiz; Fatima, Tahira; Mattoo, Autar

    2015-07-01

    Biotypes of the broad-leaved wild mustard (Sinapis arvensis L.) found in wheat fields of Aegean and Marmara region of Turkey were characterized and shown to have developed resistance to sulfonylurea (chlorsulfuron), an inhibitor of acetolactate synthase (ALS). DNA sequence analysis of the ALS genes from two such resistant (‘R’) biotypes, KNF-R1 and KNF-R2, revealed point mutations, CCT (Pro 197) to TCT (Ser 197) in KNF-R1 and CCT (Pro 197) to ACT (Thr 197) in KNF-R2; these substitutions are consistent with the presence of chlorsulfuron-insensitive ALS enzyme activity in the ‘R’ S. arvensis biotypes. An additional phenotype of chlorsulfuron resistance in the Turkish S. arvensis ‘R’ biotypes was revealed in the form of an altered seed dormancy behavior over 4 to 48 months of dry storage (after-ripening) compared to the susceptible (‘S’) biotypes. Seeds of the ‘S’ biotypes dry stored for 4 months had a higher initial germination, which sharply decreased with storage time, while the seeds of the ‘R’ biotypes had lower germination after 4-months storage, rising sharply and peaking thereafter by 24 months’ of dry storage. The ‘R’ biotype seeds continued to maintain a higher germination percentage even after 48 months of after-ripening. The seed weight of ‘R’ and ‘S’ biotypes after-ripened for 4 months was similar but those after-ripened for 48 months differed, ‘R’ seeds were significantly heavier than those of the ‘S’ seeds. Differential seed germinability between ‘S’ and ‘R’ biotypes was found not a case of differential viability, temperature regimen or non-response to pro-germination hormone GA3. These studies are of relevance to ecological fitness of herbicide-resistant biotypes in terms of seed viability and germination.

  8. Suitability changes with host leaf age for Bemisia tabaci B biotype and Trialeurodes vaporariorum.

    Science.gov (United States)

    Zhang, Gui-Fen; Wan, Fang-Hao

    2012-10-01

    The suitability of tomato leaves of different ages for Bemisia tabaci (Gennadius) B biotype and Trialeurodes vaporariorum (Westwood) was characterized by development time, stage-specific survival, sex ratio, longevity, and fecundity. Three categories of leaf ages were tested (young: expanding leaves <2 wk old; mature: fully expanded, 4-5-wk-old leaves; old: fully expanded, 6-7-wk-old leaves). There was no significant variation in the duration of development of the two species among the three classes of leaf ages, but total survival and ratio of females to males on mature and old leaves were higher than on young leaves. For egg hatch, the reverse tendency was found. Longevity of both species was higher on mature than on young leaves, and fecundity during the first 2 wk of adult life was higher on mature than on young or old leaves. The B. tabaci B biotype developed faster through the quiescent fourth nymphal instar, had higher ratio of females to males, survived longer, and produced more eggs (in the first 2 wk of adult life) than T. vaporariorum on leaves of the same age; although on young leaves, B. tabaci B biotype survivorship was lower than that of T. vaporariorum. The index of host suitability of B. tabaci B biotype was higher on mature and old leaves than on young leaves. In T. vaporariorum, no such differences were found among these three leaf ages. The results could provide some cues why B. tabaci B biotype is spreading so vigorously.

  9. Inheritance of Evolved Glyphosate Resistance in a North Carolina Palmer Amaranth (Amaranthus palmeri Biotype

    Directory of Open Access Journals (Sweden)

    Aman Chandi

    2012-01-01

    Full Text Available Inheritance of glyphosate resistance in a Palmer amaranth biotype from North Carolina was studied. Glyphosate rates for 50% survival of glyphosate-resistant (GR and glyphosate-susceptible (GS biotypes were 1288 and 58 g ha−1, respectively. These values for F1 progenies obtained from reciprocal crosses (GR×GS and GS×GR were 794 and 501 g ha−1, respectively. Dose response of F1 progenies indicated that resistance was not fully dominant over susceptibility. Lack of significant differences between dose responses for reciprocal F1 families suggested that genetic control of glyphosate resistance was governed by nuclear genome. Analysis of F1 backcross (BC1F1 families showed that 10 and 8 BC1F1 families out of 15 fitted monogenic inheritance at 2000 and 3000 g ha−1 glyphosate, respectively. These results indicate that inheritance of glyphosate resistance in this biotype is incompletely dominant, nuclear inherited, and might not be consistent with a single gene mechanism of inheritance. Relative 5-enolpyruvylshikimate-3-phosphate synthase (EPSPS copy number varied from 22 to 63 across 10 individuals from resistant biotype. This suggested that variable EPSPS copy number in the parents might be influential in determining if inheritance of glyphosate resistance is monogenic or polygenic in this biotype.

  10. Comparative Morphology and Morphometry of Six Biotypes of Bemisia tabaci (Hemiptera:Aleyrodidae) from China

    Institute of Scientific and Technical Information of China (English)

    LI Jing-jing; TANG Qing-bo; BAI Run-e; LI Xiao-min; JIANG Jin-wei; ZHAI Qing; YAN Feng-ming

    2013-01-01

    Morphology and morphometry of six biotypes (B, Q, Cv, ZHJ-1, ZHJ-2 and ZHJ-3) of Bemisia tabaci (Gennadius) from China on cotton plants were studied by using microscopes. Nymphal body sizes and characters were measured and observed, especially on the 4th instar (pupal case), including the vasiform orifice, operculum, lingula, length and thickness of anterior and posterior wax margins, width of thoracic tracheal combs. Adult characters of both sexes were investigated including the body size, compound eyes, antennal segments, vasiform orifice, hind tarsi and genitals. The results indicated that differences of some morphological characters or morphometrics were significant among the six biotypes of B. tabaci in China:(1) Pupal sizes of the exotic biotypes (B and Q) were significantly larger than the indigenous biotypes with the following order as B>Q>ZHJ-1>Cv>ZHJ-3>ZHJ-2;(2) for both male and female adults, sizes of all characters investigated in the invading biotypes (B and Q), especially B, were much larger than those of the indigenous ones.

  11. Complete Genome Sequence of Lactobacillus oris J-1, a Potential Probiotic Isolated from the Human Oral Microbiome.

    Science.gov (United States)

    Jia, Fang

    2016-01-01

    Lactobacilli can exert health-promoting effects in the human oral microbiome through many mechanisms, including pathogen inhibition, maintenance of microbial balance, immunomodulation, and enhancement of the epithelial barrier function. Here, we present the complete genome sequence of a potential probiotic, Lactobacillus oris J-1, that was isolated from the oral cavity of a health child. PMID:27634996

  12. Genome Sequence of Anoxybacillus flavithermus Strain AK1, a Thermophile Isolated from a Hot Spring in Saudi Arabia

    KAUST Repository

    Khalil, Amjad

    2015-06-04

    Anoxybacillus flavithermus strain AK1 was isolated from Al-Ain Alhara, a thermal hot spring located 50 km southeast of the city of Gazan, Saudi Arabia (16°56ʹN, 43°15ʹE). The sequenced and annotated genome is 2,630,664 bp and encodes 2,799 genes.

  13. Complete Genome Sequence of Lactobacillus oris J-1, a Potential Probiotic Isolated from the Human Oral Microbiome.

    Science.gov (United States)

    Jia, Fang

    2016-01-01

    Lactobacilli can exert health-promoting effects in the human oral microbiome through many mechanisms, including pathogen inhibition, maintenance of microbial balance, immunomodulation, and enhancement of the epithelial barrier function. Here, we present the complete genome sequence of a potential probiotic, Lactobacillus oris J-1, that was isolated from the oral cavity of a health child.

  14. Complete Genome Sequence of Lactobacillus oris J-1, a Potential Probiotic Isolated from the Human Oral Microbiome

    Science.gov (United States)

    2016-01-01

    Lactobacilli can exert health-promoting effects in the human oral microbiome through many mechanisms, including pathogen inhibition, maintenance of microbial balance, immunomodulation, and enhancement of the epithelial barrier function. Here, we present the complete genome sequence of a potential probiotic, Lactobacillus oris J-1, that was isolated from the oral cavity of a health child. PMID:27634996

  15. Activation of cell signaling pathways is dependant on the biotype of bovine viral diarrhea virus type 2

    Science.gov (United States)

    Bovine viral diarrhea virus (BVDV), a pestivirus of the Flaviviridae family, is an economically important cattle pathogen with a world wide distribution. Besides the segregation into two distinct species (BVDV1 / BVDV2) two different biotypes, a cytopathic (cp) and a noncytopathic (ncp) biotype, are...

  16. Physiology of Glyphosate-Resistant and Glyphosate-Susceptible Palmer Amaranth (Amaranthus palmeri Biotypes Collected from North Carolina

    Directory of Open Access Journals (Sweden)

    Jared R. Whitaker

    2013-01-01

    Full Text Available Glyphosate-resistant (GR biotypes of Palmer amaranth are now commonly found across the southern United States. Experiments were conducted to characterize physiological differences between a GR biotype and a glyphosate-susceptible (GS biotype from North Carolina. The GR biotype had an 18-fold level of resistance based upon rates necessary to reduce shoot fresh weight 50%. Shikimate accumulated in both biotypes following glyphosate application, but greater concentrations were found in GS plants. Absorption and translocation of 14C-glyphosate were studied in both biotypes with and without an overspray with commercial glyphosate potassium salt (840 g ae ha−1 immediately prior to 14C-glyphosate application. Greater absorption was noted 6 h after treatment (HAT in GS compared with GR plants, but no differences were observed at 12 to 72 HAT. Oversprayed plants absorbed 33 and 61% more 14C by 48 and 72 HAT, respectively, than plants not oversprayed. 14C distribution (above treated leaf, below treated leaf, roots was similar in both biotypes. Together, these results suggest that resistance in this biotype is not due to an altered target enzyme or translocation but may be in part due to the rate of glyphosate absorption. These results also are consistent with resistance being due to increased gene copy number for the target enzyme.

  17. Differential Light Responses of Photosynthesis by Triazine-resistant and Triazine-susceptible Senecio vulgaris Biotypes 1

    Science.gov (United States)

    Holt, Jodie Sims; Stemler, Alan J.; Radosevich, Steven R.

    1981-01-01

    Studies were conducted to determine a physiological basis for competitive differences between Senecio vulgaris L. biotypes which are either resistant or susceptible to triazine herbicides. Net carbon fixation of intact leaves of mature plants was higher at all light intensities in the susceptible biotype than in the resistant biotype. Quantum yields measured under identical conditions for each biotype were 20% lower in the resistant than in the susceptible biotype. Oxygen evolution in continuous light measured in stroma-free chloroplasts was also higher at all light intensities in the susceptible biotype than in the resistant biotype. Oxygen evolution in response to flashing light was measured in stroma-free chloroplasts of both biotypes. The steady-state yield per flash of resistant chloroplasts was less than 20% that of susceptible chloroplasts. Susceptible chloroplasts displayed oscillations in oxygen yield per flash typically observed in normal chloroplasts, whereas the pattern of oscillations in resistant chloroplasts was noticeably damped. It is suggested that modification of the herbicide binding site which confers s-triazine resistance may also affect the oxidizing side of photosystem II, making photochemical electron transport much less efficient. This alteration has resulted in a lowered capacity for net carbon fixation and lower quantum yields in whole plants of the resistant type. PMID:16661747

  18. Winter Activity and Aboveground Hybridization Between the Two Biotypes of the West Nile Virus Vector Culex pipiens

    NARCIS (Netherlands)

    Vogels, C.B.F.; Peppel, van de L.J.J.; Vliet, van A.J.H.; Westenberg, M.; Ibanez-Justicia, A.; Stroo, A.; Buijs, J.A.; Visser, T.M.; Koenraadt, C.J.M.

    2015-01-01

    Culex (Cx.) pipiens mosquitoes are important vectors of West Nile virus (WNV). In Europe, the species Cx. pipiens consists of two biotypes, pipiens and molestus, which are morphologically identical, but differ in behavior. Typical behavior of the molestus biotype is the ability to remain active duri

  19. Nosema sp. PM-1, a new isolate of microsporidian from infected Papilio machaon Linnaeus, based on ultrastructure and molecular identification.

    Science.gov (United States)

    Liu, Tie; Xu, Jinshan; Luo, Bo; Chen, Jie; Li, Zeng; Li, Tian; Pan, Guoqing; Li, Xueyan; Zhou, Zeyang

    2015-06-01

    A new microsporidium, Nosema sp. PM-1, was first isolated from Papilio machaon Linnaeus. The spore shape of the PM-1 isolate was a long oval with an average size of 3.22 μm × 1.96 μm. Ultrastructure observation showed that PM-1 had a typical Nosema common diplokaryotic nuclei structure with 10-13 polar filament coils, spore wall, plasma membrane, and anchoring disk. The complete rRNA gene sequences were obtained by polymerase chain reaction amplification and each rRNA unit was arrayed as follows: 5'-LSU (2497 bp)-ITS (179 bp)-SSU (1232 bp)-IGS (278 bp)-5S (115 bp)-3', which was the same as typical Nosema. The phylogenetic trees of rRNA, DNA-directed RNA polymerase II subunit, and tubulin genes all show that PM-1 was a sister to the clade comprising Nosema bombycis, Nosema spodopterae, and Nosema sp. PX1. The spore morphology, ultrastructure, and complete rRNA structure indicate that this isolate assigned to the ˝true˝ Nosema group, can parasitized in Papilio machaon Linnaeus, which provides a wider host range for Nosema. PMID:26204003

  20. Serious systemic infection caused by non-encapsulated Haemophilus influenzae biotype III in an adult

    DEFF Research Database (Denmark)

    Lester, Anne; Pedersen, P B

    1991-01-01

    Haemophilus influenzae is the aetiological agent in less than 1% of septic arthritis cases in adults and most often serotype b is involved. We report here a case of severe systemic infection due to non-encapsulated H. influenzae biotype III in a 40-year-old man, previously healthy although alcohol...... abuser. Cholangitis and acute alcoholic hepatitis were diagnosed simultaneously. The organism was grown from blood and from synovial fluid of the left knee, but several other joints were also affected. The close relationship between H. influenzae biotype III and H. aegyptius is mentioned in view...... of recent reports of fatal childhood illness caused by a special clone of H. aegyptius and the importance of reporting both serotype and biotype in severe H. influenzae induced disease is emphasized....

  1. Influence of Additives on the Yield and Pathogenicity of Conidia Produced by Solid State Cultivation of an Isaria javanica Isolate

    OpenAIRE

    Kim, Jeong Jun; Xie, Ling; Han, Ji Hee; Lee, Sang Yeob

    2014-01-01

    Recently, the Q biotype of tobacco whitefly has been recognized as the most hazardous strain of Bemisia tabaci worldwide, because of its increased resistance to some insecticide groups. As an alternative control agent, we selected an Isaria javanica isolate as a candidate for the development of a mycopesticide against the Q biotype of sweet potato whitefly. To select optimal mass production media for solid-state fermentation, we compared the production yield and virulence of conidia between 2...

  2. CHARACTERIZATION OF A NEW BIOTYPE Moringa OF SAUDI ARABIA USING RAPD AND ISSR MARKERS

    Directory of Open Access Journals (Sweden)

    Iyan Robiansyah

    2015-11-01

    Full Text Available Moringa peregrina and M. oleifera are the only Moringa species found in Saudi Arabia. Both species are drought resistant and have very high nutritional and medicinal properties. Detection of genetic diversity is of great value for the improvement of nutritional and medicinal value of these plants. The aim of the present study was to characterize a new biotype Moringa observed in Al Bahah Region, Saudi Arabia. We used 11 RAPD and 15 ISSR primers to characterize and compare the new biotype with M. peregrina and M. oleifera. Level of polymorphism generated by each marker was calculated. We also calculate Nei and Li’s coefficient to measure the genetic distance between the studied species. Level of polymorphism generated by RAPD and ISSR was 46% and 57%, respectively. RAPD and ISSR primers revealed that the new biotype shared 55 amplicons (45.08% with both M. peregrina and M. oleifera, 28 amplicons with M. peregrina (22.95%, 21 amplicons (17.21% with M. oleifera, and displayed 18 unshared amplicons (14.75%. Based on RAPD data, genetic distance between M. oleifera and M. peregrina was 0.32, whereas genetic distance between the new biotype and M. oleifera and M. peregrina was 0.21 and 0.29, respectively. For ISSR data, genetic distance between M. oleifera and M. peregrina was 0.5, whereas genetic distance between the new biotype and M. oleifera and M. peregrina was 0.36 and 0.34, respectively. Based on these results we suggested that the new biotype is a hybrid crossbred between M. peregrina and M. oleifera.

  3. Impact of the safener Mefenpyr-diethyl on herbicide resistance evolution in Alopecurus myosuroides (Huds. biotypes

    Directory of Open Access Journals (Sweden)

    Rosenhauer, Maria

    2016-02-01

    Full Text Available The evolution of herbicide resistance is an important topic in plant protection and agricultural practice. Safeners are commonly used in herbicides to protect crops against herbicidal damage. Although no effect on the weed control is expected, it has been theorized that the rate of evolution of non-target site resistance (NTSR in weeds in cereals may be enhanced by use of herbicide products containing safeners. One of the most important safeners in cereals is mefenpyr-diethyl. Therefore, the possible influence of mefenpyr on herbicide resistance was studied in cooperative trials between Bayer CropScience (BCS, F-Höchst and FH Bingen. The trials tested in parallel different herbicide resistant black-grass (Alopecurus myosuroides (Huds. biotypes under greenhouse conditions. The biotypes where chosen due to known NTSR against Atlantis WG® (4 highly resistant and 5 moderately resistant as well as two susceptible biotypes. The populations were treated with the following three herbicide/safener regimes in six concentrations adjusted according to the anticipated biotype resistance levels. (1 mesosulfuron + iodosulfuron + without safener formulation, (2 mesosulfuron + iodosulfuron + constant mefenpyr concentration (45g/ha, (3 mesosulfuron + iodosulfuron + varying mefenpyr concentrations (ratio 5:1:15. The treatments were applied in post-emergence based on mesosulfuron to iodosulfuron ratios in Atlantis WG® (5:1. The trials were assessed visually (% effect and by fresh weight. Dose-response curves were performed and ED50 values for each treatment and biotype were calculated. Results showed a varying effect of safeners which was in the most cases negligible. Depending on the biotypes mostly no impact on the safener was found for herbicide resistance. In conclusion, the trials from Bingen and F-Höchst gave evidence, that there is no significant and consistent influence of the safener mefenpyr on evolution of NTSR black-grass.

  4. Host plant effects on alkaline phosphatase activity in the whiteflies, Bemisia tabaci Biotype B and Trialeurodes vaporariorum.

    Science.gov (United States)

    Yan, Ying; Peng, Lu; Liu, Wan-Xue; Wan, Fang-Hao; Harris, Marvin K

    2011-01-01

    Bemisia tabaci (Gennadius) B-biotype and Trialeurodes vaporariorum (Westwood) (Hemiptera: Aleyrodidae) often coexist on greenhouse-grown vegetable crops in northern China. The recent spread of B. tabaci B-biotype has largely replaced T. vaporariorum, and B-biotype now overlaps with T. vaporariorum where common hosts occur in most invaded areas. The impact of the B-biotype on the agro eco system appears to be widespread, and involves the ability to compete with and perhaps replace other phytophages like T. vaporariorum. An emerging hypothesis is that the B-biotype is physiologically superior due at least in part to an improved ability to metabolically utilize the alkaline phosphatase pathway. To test this hypothesis, alkaline phosphatase activity was studied in the B-biotype and T. vaporariorum after feeding on a number of different hosts for a range of durations, with and without host switching. Alkaline phosphatase activity in T. vaporariorum was 1.45 to 2.53-fold higher than that of the B-biotype when fed on tomato for 4 and 24 h, or switched from tomato to cotton and cabbage for the same durations. However, alkaline phosphatase activity in the B-biotype was 1.40 to 3.35-fold higher than that of T. vaporariorum when the host switching time was ∼72 and ∼120 h on the same plant. Both short-term (4 h) and long-term (72 h) switching of plant hosts can significantly affect the alkaline phosphatase activity in the two species. After ∼120 h, feeding on tomato and cotton alkaline phosphatase activity in the B-biotype was significantly higher than that of T. vaporariorum. It was shown that alkaline phosphatase aids the species feeding on different plant species, and that the B-biotype is physiologically superior to T. vaporariorum in utilizing the enzyme compared to T. vaporariorum over longer periods of feeding.

  5. Inheritance of Evolved Glyphosate Resistance in a North Carolina Palmer Amaranth (Amaranthus palmeri) Biotype

    OpenAIRE

    Aman Chandi; Susana R. Milla-Lewis; Darci Giacomini; Philip Westra; Christopher Preston; Jordan, David L.; Alan C. York; James D. Burton; Jared R. Whitaker

    2012-01-01

    Inheritance of glyphosate resistance in a Palmer amaranth biotype from North Carolina was studied. Glyphosate rates for 50% survival of glyphosate-resistant (GR) and glyphosate-susceptible (GS) biotypes were 1288 and 58 g ha−1, respectively. These values for F1 progenies obtained from reciprocal crosses (GR×GS and GS×GR were 794 and 501 g ha−1, respectively. Dose response of F1 progenies indicated that resistance was not fully dominant over susceptibility. Lack of significant differences betw...

  6. Records of Natural Enemies of Bemisia tabaci (Genn.) (Hemiptera: Aleyrodidae) Biotype B in Brazil.

    Science.gov (United States)

    Torres, L C; Lourenção, A L; Costa, V A; Souza, B; Costa, M B; Tanque, R L

    2014-04-01

    Collections of natural enemies of Bemisia tabaci biotype B (Genn.) (Hemiptera: Aleyrodidae) were made in Lavras, state of Minas Gerais, Brazil. In the greenhouse, 6,495 predators and 16,628 parasitoids belonging to three families were collected. In the field, 267 predators and 344 parasitoids belonging to five families were found. For the first time in Brazil, five species of predators associated with this whitefly were reported. Because of the diversity of natural enemies of B. tabaci biotype B recorded, this study points out the importance of these data for studies on integrated pest management.

  7. Characterisation of Yersinia pseudotuberculosis isolated from animals with yersiniosis during 1996-2013 indicates the presence of pathogenic and Far Eastern strains in Italy.

    Science.gov (United States)

    Magistrali, C F; Cucco, L; Pezzotti, G; Farneti, S; Cambiotti, V; Catania, S; Prati, P; Fabbi, M; Lollai, S; Mangili, P; Sebastiani, C; Bano, L; Dionisi, A M; Luzzi, I

    2015-10-22

    Yersinia pseudotuberculosis is a pathogen that infects both animals and humans worldwide. The epidemiology of infection caused by Y. pseudotuberculosis is poorly understood; however, its outbreaks have been traced back to a probable source in wildlife. This study aimed to characterise Y. pseudotuberculosis isolates collected from animals with yersiniosis. This study included 90 isolates of Y. pseudotuberculosis collected from different animals with yersiniosis between 1996 and 2013 in Italy. The isolates were tested for antimicrobial susceptibility and were biotyped. Genes associated with virulence plasmid pYV and those encoding O-antigen, high pathogenicity island (HPI), and superantigenic toxin (YPM) were determined by performing PCR. Pulsed-field gel electrophoresis (PFGE) was performed using NotI and SpeI enzymes, and 3 dendrograms were generated. No antibiotic resistance was found. The presence of pYV was shown in 57 out of 90 isolates. Virulence profiles of majority of the isolates indicated that they belonged to O:1a and O:1b serotypes, biotype 1, and genetic type 2. Isolates belonging to O:2a serotype were detected in sheep and cattle and were found to be associated (for the first time) with septicemia in hares. Y. pseudotuberculosis isolates belonging to O:5a and O:12-O13 serotypes were also detected in hares. To our knowledge, this is the first study to detect Y. pseudotuberculosis isolates belonging to the O:12-O13 serotype from a clinical case in Europe. Results of PFGE indicated that it was a reliable method for investigating the genetic relatedness of Y. pseudotuberculosis isolates. Thus, characterisation of Y. pseudotuberculosis infection in animals should be considered a possible tool for the surveillance of pseudotuberculosis.

  8. Synthesis of the (9R,13R)-isomer of LDS1, a flower-inducing oxylipin isolated from Lemna paucicostata.

    Science.gov (United States)

    Takayasu, Yuki; Ogura, Yusuke; Towada, Ryo; Kuwahara, Shigefumi

    2016-08-01

    The first synthesis of the (9R,13R)-stereoisomer of LDS1, a flower-inducing oxylipin isolated from Lemna paucicostata, has been achieved from a known allylic alcohol by a seven-step sequence that involves the Horner-Wadsworth-Emmons olefination to construct its full carbon framework and an enzymatic hydrolysis of a penultimate methyl ester intermediate to provide the target molecule. PMID:27023212

  9. Comparative protection of two different commercial vaccines against Yersinia ruckeri serotype O1 and biotype 2 in rainbow trout (Oncorhynchus mykiss)

    DEFF Research Database (Denmark)

    Deshmukh, S.; Raida, M. K.; Dalsgaard, Inger;

    2012-01-01

    Differentially extended specific protection by two commercial vaccines against Yersinia ruckeri serotype O1 biotype 2 was studied following 30s immersion exposure. Rainbow trout were challenged intra-peritoneally (i.p.) with Y. ruckeri serotype O1, biotype 2 (≈106 to 107CFU/fish) at 4, 6 and 8...... months after vaccination with vaccines containing either biotype 1 (AquaVac® ERM) or both biotypes 1 and 2 (AquaVac® RELERA™). The specific pattern of vaccine-mediated protection was evaluated by relative percentage survival (RPS) analysis at 4 and 6 months post-vaccination and by obtaining gross...... months without any booster vaccination. A specific and adaptive response induced by AquaVac® RELERA™ vaccine against Y. ruckeri biotype 2 was clearly indicated. In addition, some degree of cross protection rendered by AquaVac® ERM containing biotype 1 during infection with Y. ruckeri biotype 2 was also...

  10. Evaluation and reselection of wheat resistance to Russian wheat aphid biotype 2

    Science.gov (United States)

    Russian wheat aphid (RWA, Diuraphis noxia, Mordvilko) biotype 2 (RWA2) is virulent to most known RWA resistance genes and severely threatens wheat production in the hard winter wheat area of the US western Great Plains. We determined RWA2 reactions of 386 cultivars from China, 227 advanced breeding...

  11. Reproduction and Population Dynamics as Biotypic Markers of Russian Wheat Aphid Diuraphis noxia (Kurdjumov

    Directory of Open Access Journals (Sweden)

    Watson Ngenya

    2016-04-01

    Full Text Available Russian wheat aphid Diuraphis noxia (Kurdjumov is widely established in wheat-growing countries where it causes significant economic losses. The development and use of Russian wheat aphid (RWA-resistant wheat varieties has been constrained by the variation in resident RWA populations and the evolution of virulent biotypes. An experiment was set up at the Kenya Agricultural and Livestock Research Organization (KALRO, Njoro, to characterize RWA populations based on phenotypic characteristics of reproduction, development and population dynamics. RWA populations from the regions of Eldoret, Mau Narok and Njoro were used in the study. A factorial experiment was set up in randomized complete block design replicated eleven times. A single day-old nymph was placed on a new, fully-open leaf in a 0.5 cm-diameter clear plastic straw leaf cage and observed daily for its entire lifetime. The results showed that there were variations in aphid lifespan, reproductive longevity and aphid fecundity between populations, indicating that the phenotypic markers used to determine biotypes were good enough to show distinct biotypes among populations of the RWA in Kenya. Further, the study concluded that the use of phenotypic life and reproductive markers was a valid way of characterizing biotypes of RWA worldwide.

  12. Characteristics of periodontal biotype, its dimensions, associations and prevalence: a systematic review

    NARCIS (Netherlands)

    J. Zweers; R.Z. Thomas; D.E. Slot; A.S. Weisgold; G.A. van der Weijden

    2014-01-01

    Aim The objectives of this review were as follows: What are characteristics used to define various forms of periodontal biotypes? What are their anatomic dimensions in relation to the definition? In addition, what is the association between these various characteristics in relation to the periodonta

  13. Reproduction and Population Dynamics as Biotypic Markers of Russian Wheat Aphid Diuraphis noxia (Kurdjumov).

    Science.gov (United States)

    Ngenya, Watson; Malinga, Joyce; Tabu, Isaiah; Masinde, Emily

    2016-01-01

    Russian wheat aphid Diuraphis noxia (Kurdjumov) is widely established in wheat-growing countries where it causes significant economic losses. The development and use of Russian wheat aphid (RWA)-resistant wheat varieties has been constrained by the variation in resident RWA populations and the evolution of virulent biotypes. An experiment was set up at the Kenya Agricultural and Livestock Research Organization (KALRO), Njoro, to characterize RWA populations based on phenotypic characteristics of reproduction, development and population dynamics. RWA populations from the regions of Eldoret, Mau Narok and Njoro were used in the study. A factorial experiment was set up in randomized complete block design replicated eleven times. A single day-old nymph was placed on a new, fully-open leaf in a 0.5 cm-diameter clear plastic straw leaf cage and observed daily for its entire lifetime. The results showed that there were variations in aphid lifespan, reproductive longevity and aphid fecundity between populations, indicating that the phenotypic markers used to determine biotypes were good enough to show distinct biotypes among populations of the RWA in Kenya. Further, the study concluded that the use of phenotypic life and reproductive markers was a valid way of characterizing biotypes of RWA worldwide. PMID:27049398

  14. Agronomical and chemical characterisation of Thymbra capitata (L.) Cav. biotypes from Sicily, Italy.

    Science.gov (United States)

    Tuttolomondo, Teresa; Dugo, Giacomo; Leto, Claudio; Cicero, Nicola; Tropea, Alessia; Virga, Giuseppe; Leone, Raffaele; Licata, Mario; La Bella, Salvatore

    2015-01-01

    In this study, the agronomical and chemical characterisation of 13 Sicilian biotypes of Thymbra capitata (L.) Cav., grown under the same agricultural and environmental condition, are reported. The main morpho-productive parameters and quali-quantitative profile of essential oils (EOs) were determined. The EOs were analysed by gas chromatography-flame ionisation detector and gas chromatography-mass spectrometry. Hierarchical cluster analysis and principal component analysis statistical methods were used to group biotypes according to the EOs chemical composition. The EO yield ranged between 4.6 and 8.1 (v/w). A total of 38 EO compounds have been identified. The compounds mostly represented were α-pinene, myrcene, α-terpinene, p-cymene, γ-terpinene, borneol, carvacrol and β-caryophyllene. In all biotypes, the carvacrol (67.4-79.5%) was the main compound, confirming that T. capitata is a carvacrol chemotype. The results showed that all Sicilian Thymbra biotypes have a good adaptation to the climatic conditions of the test environment. PMID:25600887

  15. The discovery of resistant sources of spring barley, Hordeum vulgare ssp. spontaneum, and unique greenbug biotypes

    Science.gov (United States)

    The genetic sources for host-plant resistance to the greenbug (Schiazphis graminum Ronani) in barley (Hordeum vulgare ssp. spontaneum) are limited in that only two single dominant genes Rsg1 and Rsg2 are available for resistance to greenbug biotypes. We evaluated four new barley lines from the Wild...

  16. An atypical biotype I Actinobacillus pleuropneumoniae serotype 13 is present in North America

    DEFF Research Database (Denmark)

    Perry, Malcolm B.; Angen, Øystein; MacLean, Leann L.;

    2012-01-01

    Atypical Actinobacillus pleuropneumoniae serotype 13 strains present in North America are described here for the first time. Different from serotype 13 strains described in Europe, North America strains are biotype I and antigenically related to both, serotypes 13 and 10. Chemical and structural...

  17. Anti-platelet effect of cumanastatin 1, a disintegrin isolated from venom of South American Crotalus rattlesnake.

    Science.gov (United States)

    Da Silva, Manuel; Lucena, Sara; Aguilar, Irma; Rodríguez-Acosta, Alexis; Salazar, Ana M; Sánchez, Elda E; Girón, Maria E; Carvajal, Zoila; Arocha-Piñango, Carmen L; Guerrero, Belsy

    2009-03-01

    Disintegrins have been previously described in the venom of several snake families inhibiting signal transduction, cell-cell interactions, and cell-matrix interactions and may have therapeutic potential in heart attacks, thrombotic diseases, and cancers. This investigation describes the first disintegrin isolated from South American Crotalus venom (Venezuelan rattlesnake Crotalus durissus cumanensis), which inhibits platelet adhesion to matrix proteins. C. d. cumanensis crude venom was first separated on a Sephadex G-100 column into 4 fractions (SI to SIV). Crude venom and SIII fraction significantly diminished platelet adhesion to fibrinogen (Fg) and to fibronectin (Fn). Anti-adhesive SIII fraction was further separated by DEAE-Sephacel followed by C-18 reverse phase high performance liquid chromatography (HPLC). The platelet anti-adhesive fraction obtained was designated as cumanastatin-1. This disintegrin has a mass of 7.442 kDa as determined by mass spectrometry (MALDI-TOF/TOF) and pI of 8.5. Cumanastatin-1 also inhibited ADP-induced platelet aggregation with an IC(50) of 158 nM. However, it did not significantly inhibit collagen and thrombin-induced platelet aggregation. Cumanastatin-1 considerably inhibited anti-alpha(IIb)beta(3) integrin binding to platelets in a dose-dependent manner; however, it did not present any effect on the alpha(5)beta(1) integrin or on P-selectin.

  18. Isolation, synthesis and characterization of ω-TRTX-Cc1a, a novel tarantula venom peptide that selectively targets L-type Cav channels.

    Science.gov (United States)

    Klint, Julie K; Berecki, Géza; Durek, Thomas; Mobli, Mehdi; Knapp, Oliver; King, Glenn F; Adams, David J; Alewood, Paul F; Rash, Lachlan D

    2014-05-15

    Spider venoms are replete with peptidic ion channel modulators, often with novel subtype selectivity, making them a rich source of pharmacological tools and drug leads. In a search for subtype-selective blockers of voltage-gated calcium (CaV) channels, we isolated and characterized a novel 39-residue peptide, ω-TRTX-Cc1a (Cc1a), from the venom of the tarantula Citharischius crawshayi (now Pelinobius muticus). Cc1a is 67% identical to the spider toxin ω-TRTX-Hg1a, an inhibitor of CaV2.3 channels. We assembled Cc1a using a combination of Boc solid-phase peptide synthesis and native chemical ligation. Oxidative folding yielded two stable, slowly interconverting isomers. Cc1a preferentially inhibited Ba(2+) currents (IBa) mediated by L-type (CaV1.2 and CaV1.3) CaV channels heterologously expressed in Xenopus oocytes, with half-maximal inhibitory concentration (IC50) values of 825nM and 2.24μM, respectively. In rat dorsal root ganglion neurons, Cc1a inhibited IBa mediated by high voltage-activated CaV channels but did not affect low voltage-activated T-type CaV channels. Cc1a exhibited weak activity at NaV1.5 and NaV1.7 voltage-gated sodium (NaV) channels stably expressed in mammalian HEK or CHO cells, respectively. Experiments with modified Cc1a peptides, truncated at the N-terminus (ΔG1-E5) or C-terminus (ΔW35-V39), demonstrated that the N- and C-termini are important for voltage-gated ion channel modulation. We conclude that Cc1a represents a novel pharmacological tool for probing the structure and function of L-type CaV channels. PMID:24561180

  19. Invasive mechanism and management strategy of Bemisia tabaci(Gennadius) biotype B:Progress report of 973 Program on invasive alien species in China

    Institute of Scientific and Technical Information of China (English)

    2009-01-01

    Bemisia tabaci(Gennadius) biotype B,called a "superbug",is one of the most harmful biotypes of this species complex worldwide.In this report,the invasive mechanism and management of B.tabaci biotype B,based on our 5-year studies,are presented.Six B.tabaci biotypes,B,Q,ZHJ1,ZHJ2,ZHJ3 and FJ1,have been identified in China.Biotype B dominates the other biotypes in many regions of the country.Genetic diversity in biotype B might be induced by host plant,geographical conditions,and/or insecticidal application.The activities of CarE(carboxylesterase) and GSTs(glutathione-S-transferase) in biotype B reared on cucumber and squash were greater than on other host plants,which might have increased its resistance to insecticides.The higher activities of detoxification enzymes in biotype B might be induced by the secondary metabolites in host plants.Higher adaptive ability of biotype B adults to adverse conditions might be linked to the expression of heat shock protein genes.The indigenous B.tabaci biotypes were displaced by the biotype B within 225 d.The asymmetric mating interactions and mutualism between biotype B and begomoviruses via its host plants speed up widespread invasion and displacement of other biotypes.B.tabaci biotype B displaced Trialeurodes vaporariorum(Westwood) after 4-7 generations under glasshouse conditions.Greater adaptive ability of the biotype B to adverse conditions and its rapid population increase might be the reasons of its successful displacement of T.vaporariorum.Greater ability of the biotype B to switch to different host plants may enrich its host plants,which might enable it to better compete with T.vaporariorum.Native predatory natural enemies possess greater ability to suppress B.tabaci under field conditions.The kairomones in the 3rd and 4th instars of biotype B may provide an important stimulus in host searching and location by its parasitoids.The present results provide useful information in explaining the mechanisms of genetic diversity

  20. Invasive mechanism and management strategy of Bemisia tabaci (Gennadius) biotype B: progress report of 973 Program on invasive alien species in China.

    Science.gov (United States)

    Wan, FangHao; Zhang, GuiFen; Liu, ShuSheng; Luo, Chen; Chu, Dong; Zhang, YouJun; Zang, LianSheng; Jiu, Min; Lü, ZhiChuang; Cui, XuHong; Zhang, LiPing; Zhang, Fan; Zhang, QingWen; Liu, WanXue; Liang, Pei; Lei, ZhongRen; Zhang, YongJun

    2009-01-01

    Bemisia tabaci (Gennadius) biotype B, called a "superbug", is one of the most harmful biotypes of this species complex worldwide. In this report, the invasive mechanism and management of B. tabaci biotype B, based on our 5-year studies, are presented. Six B. tabaci biotypes, B, Q, ZHJ1, ZHJ2, ZHJ3 and FJ1, have been identified in China. Biotype B dominates the other biotypes in many regions of the country. Genetic diversity in biotype B might be induced by host plant, geographical conditions, and/or insecticidal application. The activities of CarE (carboxylesterase) and GSTs (glutathione-S-transferase) in biotype B reared on cucumber and squash were greater than on other host plants, which might have increased its resistance to insecticides. The higher activities of detoxification enzymes in biotype B might be induced by the secondary metabolites in host plants. Higher adaptive ability of biotype B adults to adverse conditions might be linked to the expression of heat shock protein genes. The indigenous B. tabaci biotypes were displaced by the biotype B within 225 d. The asymmetric mating interactions and mutualism between biotype B and begomoviruses via its host plants speed up widespread invasion and displacement of other biotypes. B. tabaci biotype B displaced Trialeurodes vaporariorum (Westwood) after 4-7 generations under glasshouse conditions. Greater adaptive ability of the biotype B to adverse conditions and its rapid population increase might be the reasons of its successful displacement of T. vaporariorum. Greater ability of the biotype B to switch to different host plants may enrich its host plants, which might enable it to better compete with T. vaporariorum. Native predatory natural enemies possess greater ability to suppress B. tabaci under field conditions. The kairomones in the 3rd and 4th instars of biotype B may provide an important stimulus in host searching and location by its parasitoids. The present results provide useful information in

  1. Invasive mechanism and management strategy of Bemisia tabaci (Gennadius) biotype B: progress report of 973 Program on invasive alien species in China.

    Science.gov (United States)

    Wan, FangHao; Zhang, GuiFen; Liu, ShuSheng; Luo, Chen; Chu, Dong; Zhang, YouJun; Zang, LianSheng; Jiu, Min; Lü, ZhiChuang; Cui, XuHong; Zhang, LiPing; Zhang, Fan; Zhang, QingWen; Liu, WanXue; Liang, Pei; Lei, ZhongRen; Zhang, YongJun

    2009-01-01

    Bemisia tabaci (Gennadius) biotype B, called a "superbug", is one of the most harmful biotypes of this species complex worldwide. In this report, the invasive mechanism and management of B. tabaci biotype B, based on our 5-year studies, are presented. Six B. tabaci biotypes, B, Q, ZHJ1, ZHJ2, ZHJ3 and FJ1, have been identified in China. Biotype B dominates the other biotypes in many regions of the country. Genetic diversity in biotype B might be induced by host plant, geographical conditions, and/or insecticidal application. The activities of CarE (carboxylesterase) and GSTs (glutathione-S-transferase) in biotype B reared on cucumber and squash were greater than on other host plants, which might have increased its resistance to insecticides. The higher activities of detoxification enzymes in biotype B might be induced by the secondary metabolites in host plants. Higher adaptive ability of biotype B adults to adverse conditions might be linked to the expression of heat shock protein genes. The indigenous B. tabaci biotypes were displaced by the biotype B within 225 d. The asymmetric mating interactions and mutualism between biotype B and begomoviruses via its host plants speed up widespread invasion and displacement of other biotypes. B. tabaci biotype B displaced Trialeurodes vaporariorum (Westwood) after 4-7 generations under glasshouse conditions. Greater adaptive ability of the biotype B to adverse conditions and its rapid population increase might be the reasons of its successful displacement of T. vaporariorum. Greater ability of the biotype B to switch to different host plants may enrich its host plants, which might enable it to better compete with T. vaporariorum. Native predatory natural enemies possess greater ability to suppress B. tabaci under field conditions. The kairomones in the 3rd and 4th instars of biotype B may provide an important stimulus in host searching and location by its parasitoids. The present results provide useful information in

  2. Invasive mechanism and manasement stratesy of Bemisia tabaci (Gennadius) biotype B: Progress report of 973 Program on invasive alien species in China

    Institute of Scientific and Technical Information of China (English)

    WAN FangHao; CUI XuHong; ZHANG LiPing; ZHANG Fan; ZHANG QingWen; LIU WanXue; LIANG Pei; LEI ZhongRen; ZHANG YongJun; ZHANG GuiFen; LIU ShuSheng; LUO Chen; CHU Dong; ZHANG YouJun; ZANG LianSheng; JIU Min; Lǖ ZhiChuang

    2009-01-01

    Bemisia tabaci (Gennadius) biotype B, called a "superbug", is one of the most harmful biotypes of this species complex worldwide. In this report, the invasive mechanism and management of B. tabaci bio-type B, based on our 5-year studies, are presented. Six B. tabaci biotypes, B, Q, ZHJ1, ZHJ2, ZHJ3 and FJ1, have been identified in China. Biotype B dominates the other biotypes in many regions of the country. Genetic diversity in biotype B might be induced by host plant, geographical conditions, and/or insecticidal application. The activities of CarE (carboxylesterase) and GSTs (glutathione-S-transferase) in biotype B reared on cucumber and squash were greater than on other host plants, which might have increased its resistance to insecticides. The higher activities of detoxification enzymes in biotype B might be induced by the secondary metabolites in host plants. Higher adaptive ability of biotype B adults to adverse conditions might be linked to the expression of heat shock protein genes. The in-digenous B. tabaci biotypes were displaced by the biotype B within 225 d. The asymmetric mating in-teractions and mutualism between biotype B and begomoviruses via its host plants speed up wide-spread invasion and displacement of other biotypes. B. tabaci biotype B displaced Trialeurodes vapo-rariorum (Westwood) after 4-7 generations under glasshouse conditions. Greater adaptive ability of the biotype B to adverse conditions and its rapid population increase might be the reasons of its suc-cessful displacement of T. vaporariorum. Greater ability of the biotype B to switch to different host plants may enrich its host plants, which might enable it to better compete with T. vaporariorum. Native predatory natural enemies possess greater ability to suppress B. tabaci under field conditions. The kairomones in the 3rd and 4th instars of biotype B may provide an important stimulus in host searching and location by its parasitoids. The present results provide useful information in

  3. Genetic diversity of Gallibacterium anatis isolates from different chicken flocks

    DEFF Research Database (Denmark)

    Bojesen, A.M.; Torpdahl, Mia; Christensen, H.;

    2003-01-01

    of chickens from an organic, egg-producing flock and a layer parent flock. A subset of strains was also characterized by pulsed-field gel electrophoresis and biotyping. The organic flock isolates were characterized by more than 94% genetic similarity, indicating that only a single clone was apparent...

  4. Ozone and Water Stress: Effects on the Behaviour of Two White Clover Biotypes

    Directory of Open Access Journals (Sweden)

    Massimo Fagnano

    Full Text Available ozone pollution, water stress, stomata conductance, ozone uptake, clover, OTC.Ozone is a strong oxidizing pollutant which derives by alteration of the photolytic NOx cycle and it accumulates in the troposphere spreading in rural areas and therefore determining injuries on natural vegetation and crops. Since its penetration occurs mainly through stomata, all factors which alter plant-atmosphere relations could be able to modify plant response to ozone. Interaction between ozone and water stress in Mediterranean environment was studied on ozone resistant and sensitive biotypes of white clover, which were grown in charcoal filtered and notfiltered Open Top Chambers in factorial combination with different levels of water supply. Measurements of biomass, leaf area and stomatal conductance were made during the growth period. Ozone injuries were estimated as not-filtered/filtered OTC yield ratio; the stomatal flux of ozone was estimated multiplying stomata conductance x diffusivity ratio between ozone and water vapour (0.613 x ozone hourly concentrations. The hourly values of ozone uptake were cumulated throughout the cropping periods of the two years. In the sensitive biotype, water stress reduced yield losses due to ozone from 38% to 22%, as well as yield losses due to water stress were reduced by the presence of ozone from 43% to 29%, while no interaction between ozone and water stress was observed in the resistant biotype. Biomass yield losses of the sensitive biotype were strictly correlated to cumulated ozone uptake (R2 = 0.99, while biomass yield losses of the resistant biotype were not affected by the ozone fluxes variations created by the treatments. Flux based models could better estimate yield losses due to ozone in Mediterranean environments in which other stresses could be contemporary present; therefore, the new European directives might replace the actual thresholds based

  5. Genetic Diversity of Gallibacterium anatis Isolates from Different Chicken Flocks

    OpenAIRE

    Bojesen, Anders Miki; Torpdahl, Mia; Christensen, Henrik; Olsen, John Elmerdahl; Bisgaard, Magne

    2003-01-01

    Amplified fragment length polymorphisms (AFLPs) were used to characterize the genotypic diversity of a total of 114 Gallibacterium anatis isolates originating from a reference collection representing 15 biovars from four countries and isolates obtained from tracheal and cloacal swab samples of chickens from an organic, egg-producing flock and a layer parent flock. A subset of strains was also characterized by pulsed-field gel electrophoresis and biotyping. The organic flock isolates were char...

  6. Isolation and Pharmacological Characterization of α-Elapitoxin-Ot1a, a Short-Chain Postsynaptic Neurotoxin from the Venom of the Western Desert Taipan, Oxyuranus temporalis

    Science.gov (United States)

    Barber, Carmel M.; Ahmad Rusmili, Muhamad Rusdi; Hodgson, Wayne C.

    2016-01-01

    Taipans (Oxyuranus spp.) are elapids with highly potent venoms containing presynaptic (β) and postsynaptic (α) neurotoxins. O. temporalis (Western Desert taipan), a newly discovered member of this genus, has been shown to possess venom which displays marked in vitro neurotoxicity. No components have been isolated from this venom. We describe the characterization of α-elapitoxin-Ot1a (α-EPTX-Ot1a; 6712 Da), a short-chain postsynaptic neurotoxin, which accounts for approximately 30% of O. temporalis venom. α-Elapitoxin-Ot1a (0.1–1 µM) produced concentration-dependent inhibition of indirect-twitches, and abolished contractile responses to exogenous acetylcholine and carbachol, in the chick biventer cervicis nerve-muscle preparation. The inhibition of indirect twitches by α-elapitoxin-Ot1a (1 µM) was not reversed by washing the tissue. Prior addition of taipan antivenom (10 U/mL) delayed the neurotoxic effects of α-elapitoxin-Ot1a (1 µM) and markedly attenuated the neurotoxic effects of α-elapitoxin-Ot1a (0.1 µM). α-Elapitoxin-Ot1a displayed pseudo-irreversible antagonism of concentration-response curves to carbachol with a pA2 value of 8.02 ± 0.05. De novo sequencing revealed the main sequence of the short-chain postsynaptic neurotoxin (i.e., α-elapitoxin-Ot1a) as well as three other isoforms found in O. temporalis venom. α-Elapitoxin-Ot1a shows high sequence similarity (i.e., >87%) with other taipan short-chain postsynaptic neurotoxins. PMID:26938558

  7. Isolation and Pharmacological Characterization of α-Elapitoxin-Ot1a, a Short-Chain Postsynaptic Neurotoxin from the Venom of the Western Desert Taipan, Oxyuranus temporalis

    Directory of Open Access Journals (Sweden)

    Carmel M. Barber

    2016-02-01

    Full Text Available Taipans (Oxyuranus spp. are elapids with highly potent venoms containing presynaptic (β and postsynaptic (α neurotoxins. O. temporalis (Western Desert taipan, a newly discovered member of this genus, has been shown to possess venom which displays marked in vitro neurotoxicity. No components have been isolated from this venom. We describe the characterization of α-elapitoxin-Ot1a (α-EPTX-Ot1a; 6712 Da, a short-chain postsynaptic neurotoxin, which accounts for approximately 30% of O. temporalis venom. α-Elapitoxin-Ot1a (0.1–1 µM produced concentration-dependent inhibition of indirect-twitches, and abolished contractile responses to exogenous acetylcholine and carbachol, in the chick biventer cervicis nerve-muscle preparation. The inhibition of indirect twitches by α-elapitoxin-Ot1a (1 µM was not reversed by washing the tissue. Prior addition of taipan antivenom (10 U/mL delayed the neurotoxic effects of α-elapitoxin-Ot1a (1 µM and markedly attenuated the neurotoxic effects of α-elapitoxin-Ot1a (0.1 µM. α-Elapitoxin-Ot1a displayed pseudo-irreversible antagonism of concentration-response curves to carbachol with a pA2 value of 8.02 ± 0.05. De novo sequencing revealed the main sequence of the short-chain postsynaptic neurotoxin (i.e., α-elapitoxin-Ot1a as well as three other isoforms found in O. temporalis venom. α-Elapitoxin-Ot1a shows high sequence similarity (i.e., >87% with other taipan short-chain postsynaptic neurotoxins.

  8. VdTX-1, a reversible nicotinic receptor antagonist isolated from venom of the spider Vitalius dubius (Theraphosidae).

    Science.gov (United States)

    Rocha-E-Silva, Thomaz A A; Rostelato-Ferreira, Sandro; Leite, Gildo B; da Silva, Pedro Ismael; Hyslop, Stephen; Rodrigues-Simioni, Léa

    2013-08-01

    Theraphosid spider venoms can block neurotransmission in vertebrate nerve-muscle preparations in vitro, but few of the components involved have been characterized. In this work, we describe the neuromuscular activity of venom from the Brazilian theraphosid Vitalius dubius and report the purification and pharmacological characterization of VdTX-1, a 728 Da toxin that blocks nicotinic receptors. Neuromuscular activity was assayed in chick biventer cervicis preparations and muscle responses to exogenous ACh and KCl were determined before and after incubation with venom or toxin. Changes in membrane resting potential were studied in mouse diaphragm muscle. The toxin was purified by a combination of filtration through Amicon® filters, cation exchange HPLC and RP-HPLC; toxin purity and mass were confirmed by mass spectrometry. Venom caused progressive neuromuscular blockade and muscle contracture; the blockade but not the contracture was reversible by washing. Venom attenuated contractures to exogenous ACh and KCl. Filtration yielded low (LM, 5 kDa) fractions, with the latter reproducing the contracture seen in venom but with a slight and progressive twitch blockade. The LM fraction caused reversible blockade and attenuated contractures to ACh, but had no effect on contractures to KCl. VdTX-1 (728 Da) purified from the LM fraction was photosensitive and reduced the E(max) to ACh in biventer cervicis muscle without affecting the EC₅₀; VdTX-1 also abolished carbachol-induced depolarizations. V. dubius venom contains at least two components that affect vertebrate neurotransmission. One component, VdTX-1, blocks nicotinic receptors non-competitively to produce reversible blockade without muscle contracture.

  9. Experimental infection of colostrum-deprived calves with bovine viral diarrhea virus type 1a isolated from free-ranging white-tailed deer (Odocoileus virginianus)

    Science.gov (United States)

    Raizman, Eran A.; Pogranichniy, Roman M.; Levy, Michel; Negron, Maria; Van Alstine, William

    2011-01-01

    The objective of this study was to experimentally infect calves with bovine viral diarrhea virus (BVDV) isolated from free-ranging white-tailed deer. Twelve colostrum-deprived male Holstein calves were used. Eight were inoculated intranasally with a BVDV type 1a isolated from free-ranging white-tailed deer, and the other four were inoculated with the cell culture medium only and served as a control group. Whole blood, saliva, and nasal and rectal secretions were collected on days 0, 3, 7, 10, 14, 17, and 21 after inoculation for virus isolation and real-time reverse-transcriptase polymerase chain reaction (RT-PCR). On days 14 and 21, 4 calves in the infected group and 2 in the control group were euthanized; multiple tissue samples were collected for histopathologic study. Histopathologic changes included thymic atrophy and lymphoid depletion of the Peyer’s patches in all 8 infected calves. The RT-PCR gave positive results with the buffy coat of all 8 infected calves, the nasal samples of 7, and the saliva samples of 2. Virus neutralization testing of the serum gave positive results for 4 of the 8 infected calves, and enzyme-linked immunosorbent assay of the serum gave positive results for 3. All of the samples from the control calves yielded negative results. PMID:21461198

  10. Fotossíntese de biótipos de azevém sob condição de competição Photosynthesis of ryegrass biotypes under different competition levels

    Directory of Open Access Journals (Sweden)

    G. Concenço

    2008-01-01

    Full Text Available As características associadas à atividade fotossintética de biótipos de azevém, resistente e suscetível ao herbicida glyphosate, foram avaliadas sob diferentes níveis de competição entre biótipos. O experimento foi realizado em esquema fatorial 2 x 5, com dois biótipos de azevém, resistente e suscetível ao glyphosate, cultivados em planta única no centro da parcela, competindo com zero, um, dois, três ou quatro plantas do biótipo oposto. Cinqüenta dias após a emergência, foram determinadas a taxa de fluxo de gases pelos estômatos (U - µmol s-1, a concentração de CO2 subestomática (Ci - µmol mol-1 e a taxa fotossintética (A - µmol m-2 s-1, sendo calculado ainda o CO2 consumido (ΔC - µmol mol-1 a partir dos valores de CO2 de referência e CO2 na câmara de avaliação. Os dados foram coletados utilizando-se analisador de gases no infravermelho (IRGA, marca ADC, modelo LCA 4. Foi elaborada matriz de correlação entre as variáveis. Os biótipos de azevém resistente e suscetível ao glyphosate não diferiram quanto à atividade fotossintética na ausência de competição. No entanto, a taxa fotossintética foi reduzida com o aumento na intensidade de competição com plantas do biótipo oposto, tanto para o biótipo resistente como para o suscetível, e também para o biótipo resistente quando em competição com plantas do mesmo biótipo. Atribuiu-se tal comportamento ao aumento no sombreamento mútuo e à competição por luz.Characteristics associated with photosynthetic activity of ryegrass biotypes, susceptible and resistant to glyphosate, were evaluated under different competition levels. The experiment was installed in a factorial design, with two ryegrass biotypes, susceptible and resistant to glyphosate, growing in the plot center, surrounded by 0, 1, 2, 3, and 4 plants of the opposite biotype. Fifty days after emergence, stomatal gas flow rate (U µmol s¹, sub-stomatal CO2 concentration (Ci - µmol mol-1

  11. Helicobacter pylori vacA s1a and s1b alleles from clinical isolates from different regions of Chile show a distinct geographic distribution

    Institute of Scientific and Technical Information of China (English)

    MI Díaz; A Kirberg; E Hebel; J Fierro; R Bravo; F Siegel; G Leon; G Klapp; A Venegas; A Valdivia; P Martínez; JL Palacios; P Harris; J Novales; E Garrido; D Valderrama; C Shilling

    2005-01-01

    AIM: To establish the most common vacA alleles in Helicobacter pylori(H pylori) strains isolated from Chilean patients and its relationship with gastritis and gastroduodenal ulcers.METHODS: Two hundred and forty five H pylori clinical isolates were obtained from 79 biopsies from Chilean infected patients suffering from gastrointestinal diseases. An average of 2-3 strains per patient was isolated and the vacA genotype was analyzed by PCR and 3% agarose electrophoresis. Some genotypes were checked by DNA sequencing.RESULTS: The most prevalent vacA genotype inChilean patients was s1b m1 (76%), followed by s1a m1 (21%). In contrast, the s2 m2 genotype was scarcely represented (3%).The s1b m1 genotype was found most frequently linked to gastropathies (P<0.05) rather than ulcers. Ulcers were found more commonly in male and older patients. Curiously, patients living in cities located North and far South of Santiago, the capital and largest Chilean city, carried almost exclusively strains with the s1b m1 genotype. In contrast, patients from Santiago and cities located South of Santiago carried strains with either one or both s1a m1 and s1b m1 genotypes.Regarding the s2 m2 genotype, comparison with GenBank sequences revealed that Chilean s2 sequence was identical to those of Australian, American, and Colombian strains but quite different from those of Alaska and India.CONCLUSION: Differences in geographic distribution of the s and m vaccA alleles in Chile and a relationship of s1b m1 genotype with gastritis were found. Sequence data in part support a hispanic origin for the vacA genotype.Asymmetric distribution of genotypes s1b m1 and s2 m2recedes H Pyloristrain distribution in Spain and Portugal.

  12. Exigências térmicas e estimativa do número de gerações dos biótipos "milho" e "arroz" de Spodoptera frugiperda Thermal requirements and estimate of the number of generations of biotypes "corn" and "rice" of Spodoptera frugiperda

    Directory of Open Access Journals (Sweden)

    Gustavo Rossato Busato

    2005-04-01

    Full Text Available O objetivo deste trabalho foi avaliar o efeito da temperatura sobre a biologia dos biótipos "milho" e "arroz" de Spodoptera frugiperda (J.E. Smith, 1797 (Lepidoptera: Noctuidae e estimar o número de gerações por ano em laboratório e campo. Foram coletadas lagartas de quatro populações de S. frugiperda no Estado do Rio Grande do Sul, identificadas eletroforeticamente como os biótipos "milho" e "arroz", em áreas isoladas, distanciadas entre si em mais de 300 km, produtoras de milho e arroz irrigado e em áreas adjacentes, que produzem milho e arroz irrigado lado a lado. A temperatura mais adequada para o desenvolvimento dos dois biótipos foi 25ºC. Em laboratório, podem ser obtidas 11,0 e 11,3 gerações ano-1 do biótipo "milho" proveniente de áreas isoladas e adjacentes, respectivamente. Foram estimadas 12,1 gerações ano-1 do biótipo "arroz" quando proveniente de áreas isoladas e 12,2 gerações ano-1 quando proveniente de áreas adjacentes. Em campo, estimou-se a ocorrência de 8,3 e 6,1 gerações ano-1 do biótipo "milho", respectivamente, em áreas isoladas e áreas adjacentes e 8,4 e 7,0 gerações ano-1 do biótipo "arroz", respectivamente, em áreas isoladas e áreas adjacentes. Em áreas adjacentes, o biótipo "arroz" apresenta uma geração a mais ao longo de um ano em relação ao biótipo "milho".The objective of this work was to evaluate the effect of the temperature on the biology of the biotypes "corn" and "rice" of Spodoptera frugiperda (J.E. Smith, 1797 (Lepidoptera: Noctuidae and to estimate the number of generations per year in laboratory and field. Caterpillars of four populations of S. frugiperda were collected in Rio Grande do Sul State, Brazil, identified by electrophoresis as the biotypes "corn" and "rice" in isolated areas (spaced for more than 300 km, areas of corn and irrigated rice production, as well as in adjacent areas that produces corn and rice irrigated side by side. The most appropriate

  13. Comparison of Triazine-Resistant and -Susceptible Biotypes of Senecio vulgaris and Their F1 Hybrids 1

    Science.gov (United States)

    Stowe, Amy Elizabeth; Holt, Jodie Sims

    1988-01-01

    The relationship of triazine resistance to decreased plant productivity was investigated in Senecio vulgaris L. F1 reciprocal hybrids were developed from pure-breeding susceptible (S) and resistant (R) lines. The four biotypes (S, S × R, R, R × S) were compared in terms of atrazine response, electron transport, carbon fixation, and biomass production. Atrazine response, carbon fixation rate, and PSII and whole-chain electron transport rates of hybrids were nearly identical to those of their respective maternal parents. Significant differences occurred between the two susceptible (S, S × R) and two resistant (R, R × S) biotypes in atrazine response (I50), carbon fixation rate, and PSII and whole-chain electron transport rates; PSI rates were identical in all four biotypes. Coupled and uncoupled, whole-chain electron transport rates of thylakoids of the two susceptible biotypes were approximately 50% greater than those of the two resistant biotypes at photon flux densities greater than 215 micromoles per square meter per second. Carbon exchange rates of the two susceptible biotypes were 23% greater than those of the two resistant biotypes. Hybrid biotypes (S × R, R × S) were not identical to their maternal parents in biomass production. The S, S × R, and R × S plants all achieved greater biomass than R plants. These results suggest that while the resistance mutation influences thylakoid performance, reduced productivity of triazine-resistant plants cannot be ascribed solely to decreases in electron transport or carbon assimilation rates brought about by the altered binding protein. Since the F1 hybrids differed from their maternal parents only in nuclear genes, it appears that the detrimental effects of the triazine resistance mutation on plant growth may be attenuated by interactions of the plastid and nuclear genomes. PMID:16666100

  14. Effect of Metabolites Produced by Trichoderma harzianum Biotypes and Agaricus bisporus on Their Respective Growth Radii in Culture

    OpenAIRE

    Mumpuni, A.; Sharma, H. S. S.; Brown, Averil E.

    1998-01-01

    Trichoderma harzianum biotypes Th1, Th2, and Th3 produced volatile metabolites in vitro which had similar fungistatic effects on the growth of Agaricus bisporus. Metabolites present in agar colonized by these strains also inhibited mycelial growth of A. bisporus, although the reduction in growth was less in the presence of metabolites produced by biotype Th2 than that in the presence of metabolites produced by Th1 or Th3. A. bisporus produced metabolites in liquid culture that inhibited the g...

  15. Biological traits and Life table parameters A and B biotype of Bemisia tabaci (Genn. on cotton and rapeseed

    Directory of Open Access Journals (Sweden)

    Mohammad Amin Samih

    2014-06-01

    Full Text Available The aim of this work was to construct life table of Bemisia tabaci (Gen. A and B (silverleaf whitefly B. argentifolii Bellows and Perring biotype (Hem.: Aleyrodidae on two host plants; cotton, (Gossypium hirsutum L. and rapeseed, (Brassica napus L.. Experiments were conducted in a growth chamber under 24 ± 2ºC, 55±3% RH and 16:8 (L:D h photoperiod on caged plants of cotton G. hirsutum L. (Varamin 76 variety and rapeseed B. napus L. (global variety. The intrinsic rate of natural increase (r m, net reproductive rate (R0 and mean generation time (T for B. tabaci A biotype was 0.1010 females per female per day, 18.4075 females per female and 30.079 day (d on cotton; 0.1286, 30.6760 and 26.77 d on rapeseed; and for B biotype (B. argentifolii those above respective parameters averaged 0.1033, 27.8426 and 32.74 d on cotton and 0.1750, 40.75 and 21.27 d on rapeseed. The total survival of A and B biotype from the egg to adult on cotton was 22.08 and 22.25, respectively. The results showed significant differences between the two biotype reared on either host plant for gross reproductive rate (GRR, net reproductive rate (R0 or NRR, intrinsic rates of increase (r m, finite rate of increase (λ, doubling time (DT and mean generation times (Tc. To obtain a better understanding of the biology of these biotypes, Stable age distribution (Cx and some other aspects of life history related to their hosts were also studied. Based upon the results, both biotypes showed a greater reproduction capacity on rapeseed than on cotton. Thus, rapeseed was more suitable host than cotton for two biotypes and this was an important factor in host plant selection for optimizing the control strategies of these major pests.

  16. Plasmid mediated antibiotic resistance ofVibrio cholerae O1 biotype El Tor serotype Ogawa associated with an outbreak in Kolkata, India

    Institute of Scientific and Technical Information of China (English)

    Shyamapada Mandal; Manisha DebMandal; Nishith Kumar Pal

    2010-01-01

    Objective:To determine the antibiotic resistance ofVibrio cholerae (V. cholerae)O1 biotype El Tor serotype Ogawa isolates involved in an outbreak of watery diarrhea in Kolkata, and to explore the role of plasmid in mediating antibiotic resistance.Methods: Antibiotic susceptibility and minimum inhibitory concentration(MIC) values of antibiotics for the isolated V. choleraeO1 Ogawa (n=12) were determined by disk diffusion and agar dilution methods, respectively, using ampicillin (Am), chloramphenicol (C), trimethoprim (Tm), tetracycline (T), erythromycine (Er), nalidixic acid (Nx), ciprofloxacin (Cp), amikacin (Ak) and cefotaxime (Cf). Plasmid curing of multidrug resistant(MDR)V. choleraeO1 Ogawa strains was done following ethidium bromide treatment. Following electrophoresis, the plasmidDNAs, extracted from the isolatedMDRV. choleraeO1 Ogawa strains and their cured derivatives, were visualized and documented in‘gel doc’ system.Results: The outbreak causingV. choleraeO1 Ogawa isolates wereMDR as determined by disk diffusion susceptibility test, andMIC determination. The isolates showed three different drug resistance patterns: AmTmTErNx (for6 isolates), TmTErCp (for 5 isolates), and AmTmNx (for one isolate), and showed uniform sensitivity to C, Ak and Cf. The loss of plasmids with the concomitant loss of resistance to Am, Tm, T and Er of the isolates occurred following ethidium bromide treatment.Conclusions: The current findings suggest that theV. choleraeO1Ogawa associated with the cholera outbreak wereMDR, and resistance to Am, Tm, T and Er among the isolates were plasmid mediated.

  17. Putting the pieces into place: Properties of intact zinc metallothionein 1A determined from interaction of its isolated domains with carbonic anhydrase.

    Science.gov (United States)

    Pinter, Tyler B J; Stillman, Martin J

    2015-11-01

    Mammalian metallothioneins (MTs) bind up to seven Zn(2+) using a large number of cysteine residues relative to their small size and can act as zinc-chaperones. In metal-saturated Zn7-MTs, the seven zinc ions are co-ordinated tetrahedrally into two distinct clusters separated by a linker; the N-terminal β-domain [(Zn3Cys9)(3-)] and C-terminal α-domain [(Zn4Cys11)(3-)]. We report on the competitive zinc metalation of apo-carbonic anhydrase [CA; metal-free CA (apo-CA)] in the presence of apo-metallothionein 1A domain fragments to identify domain specific determinants of zinc binding and zinc donation in the intact two-domain Znn-βαMT1A (human metallothionein 1A isoform; n=0-7). The apo-CA is shown to compete effectively only with Zn2-3-βMT and Zn4-αMT. Detailed modelling of the ESI mass spectral data have revealed the zinc-binding affinities of each of the zinc-binding sites in the two isolated fragments. The three calculated equilibrium zinc affinities [log(KF)] of the isolated β-domain were: 12.2, 11.7 and 11.4 and the four isolated α-domain affinities were: 13.5, 13.2, 12.7 and 12.6. These data provide guidance in identification of the location of the strongest-bound and weakest-bound zinc in the intact two-domain Zn7βαMT. The β-domain has the weakest zinc-binding site and this is where zinc ions are donated from in the Zn7-βαMT. The α-domain with the highest affinity binds the first zinc, which we propose leads to an unscrambling of the cysteine ligands from the apo-peptide bundle. We propose that stabilization of the intact Zn6-MT and Zn7-MT, relative to that of the sum of the separated fragments, is due to the availability of additional cysteine ligand orientations (through interdomain interactions) to support the clustered structures.

  18. New Vibrio cholerae O1 Biotype ElTor bacteriophages

    Directory of Open Access Journals (Sweden)

    Sen Anindito

    2005-04-01

    Full Text Available Abstract We report the presence of three new O1 ElTor vibriophages named AS1, AS2 and AS3, isolated from the sewage and pond waters of the outskirts of Kolkata. A few phages, named AS4, with hexagonal heads and abnormally long tails with typical curly projections were also found in the water samples.

  19. Isoquinoline derivatives isolated from the fruit of Annona muricata as 5-HTergic 5-HT1A receptor agonists in rats: unexploited antidepressive (lead) products.

    Science.gov (United States)

    Hasrat, J A; De Bruyne, T; De Backer, J P; Vauquelin, G; Vlietinck, A J

    1997-11-01

    The fruit and the leaves of Annona muricata (Annonaceae) are used in traditional medicine for their tranquillizing and sedative properties. Extracts of the plant have been shown to inhibit binding of [3H]rauwolscine to 5-HTergic 5-HT1A receptors in calf hippocampus, and three alkaloids, annonaine (1), nornuciferine (2) and asimilobine (3), isolated from the fruit have been shown to have IC50 values of 3 microM, 9 microM and 5 microM, respectively, although in ligand-binding studies it was not possible to determine whether interaction of these ligands with the receptor was agonistic or antagonistic. This paper presents the results of functional assays of the alkaloids. The inhibition of cAMP accumulation was tested in NIH-3T3 cells stably transfected with the 5-HT1A receptor from man. None of the alkaloids showed antagonistic properties towards the 5-HT1A receptors because in the antagonistic tests no influence on the forskolin-stimulated increase of cAMP level was detected. Full agonistic properties were measured for all three compounds; the inhibition constants (Ki) for 1, 2 and 3 were Annona muricata possesses anti-depressive effects, possibly induced by compounds 1, 2 and 3, and that in the past potent leads for the development of anti-depressive therapeutics have not been used.

  20. Antimicrobial Susceptibility Pattern, Biochemical Characteristics and Biotyping of Salmonella paratyphi A: An Impact of Biofield Treatment

    OpenAIRE

    Trivedi, Mahendra Kumar

    2015-01-01

    Enteric fever is a major global problem. Emergence of antimicrobial resistance threatens to render current treatments ineffective. The current study was attempted to investigate the effect of biofield treatment on Salmonella paratyphi A (S. paratyphi A) in terms of antimicrobial susceptibility assay, biochemical characteristics and biotyping. S. paratyphi A strain were procured from MicroBioLogics in sealed packs bearing the American Type Culture Collection (ATCC 9150). The study was conducte...

  1. Phenotypic and Biotypic Characterization of Klebsiella oxytoca: An Impact of Biofield Treatment

    OpenAIRE

    Trivedi, Mahendra Kumar

    2015-01-01

    Klebsiella oxytoca (K. oxytoca) is a Gram-negative microbe generally associated with community and hospitalacquired infections. Due to its clinical significance, we evaluated the effect of biofield treatment on phenotype and biotype characteristics of K. oxytoca (ATCC 43165). The study was performed into three groups i.e. C (control), T1 (treatment, revived); and T2 (treatment, lyophilized). Subsequently, groups T1 and T2 were received biofield treatment and control group was remained as untr...

  2. Phenotypic and Biotypic Characterization of Klebsiella oxytoca: An Impact of Biofield Treatment

    OpenAIRE

    Trivedi, Mahendra

    2015-01-01

    Klebsiella oxytoca (K. oxytoca) is a Gram-negative microbe generally associated with community and hospital- acquired infections. Due to its clinical significance, we evaluated the effect of biofield treatment on phenotype and biotype characteristics of K. oxytoca (ATCC 43165). The study was performed into three groups i.e. C (control), T1 (treatment, revived); and T2 (treatment, lyophilized). Subsequently, groups T1 and T2 were received biofield treatment and control group was remained as un...

  3. Biochemical and antigenic properties of Streptococcus bovis isolated from pigeons.

    OpenAIRE

    De Herdt, P; Haesebrouck, F; DEVRIESE, L.A.; Ducatelle, R.

    1992-01-01

    Biochemical and serological properties of 60 strains of Streptococcus bovis isolated from healthy pigeons and from pigeons that died from S. bovis septicemia were determined. On the basis of the hemolysis of bovine erythrocytes, the production of polysaccharides on saccharose-containing media, and the fermentation of mannitol, inulin, trehalose, and L-arabinose, the isolates were classified in five biotypes and two subbiotypes. Slide agglutination and microagglutination tests using monospecif...

  4. Determination of biotypes of Dactylopius tomentosus (Hemiptera: Dactylopiidae) and insights into the taxonomic relationships of their hosts, Cylindropuntia spp.

    Science.gov (United States)

    Mathenge, C W; Holford, P; Hoffmann, J H; Zimmermann, H G; Spooner-Hart, R; Beattie, G A C

    2010-06-01

    Host specialization to form biotypes is common among phytophagous insects, and it has been hypothesised that biotypes of Dactylopius tomentosus L. (Hemiptera: Dactylopiidae) occur. D. tomentosus is an important biological control agent for Cylindropuntia cacti when they occur as weeds. Additionally, there is uncertainty surrounding the taxonomic status of some species of Cylindropuntia. This study aimed to confirm the existence of D. tomentosus biotypes and to assess whether host specialization can help to resolve this systematic uncertainty. For this study, the host specificity and performance of ten provenances of D. tomentosus collected from C. cholla, C. fulgida var. fulgida, C. imbricata, C. f. var. mamillata, C. rosea and C. tunicata and reared on C. cholla, C. fulgida var. fulgida, C. imbricata and C. rosea were investigated. Five life-history parameters were measured including: crawler development time and survival, female development time, and the weight and number of eggs produced by females. Results revealed significant variation in host specificity with provenances either thriving, surviving or dying on the different hosts, thus demonstrating the existence of biotypes. Also, host specificity was related to host species and not to the geographic locality from which either the host or provenance was sourced. These findings suggest that the characteristics of Cylindropuntia species may differ sufficiently, there by presenting different selection pressures that induce and sustain distinct biotypes of D. tomentosus. The observed host use patterns of the biotypes separated the plant species into two groups that accorded with known phylogenetic relationships among Cylindropuntia species, suggesting that biotypes can be used to elucidate their taxonomic relatedness. Besides advancing our knowledge of the ecology and evolution of D. tomentosus, these novel findings have important implications for the biological control of Cylindropuntia species. PMID:20003574

  5. Underlying Resistance Mechanisms in the Cynosurus echinatus Biotype to Acetyl CoA Carboxylase-Inhibiting Herbicides.

    Science.gov (United States)

    Fernández, Pablo; Alcántara-de la Cruz, Ricardo; Cruz-Hipólito, Hugo; Osuna, María D; De Prado, Rafael

    2016-01-01

    Hedgehog dogtail (Cynosurus echinatus) is an annual grass, native to Europe, but also widely distributed in North and South America, South Africa, and Australia. Two hedgehog dogtail biotypes, one diclofop-methyl (DM)-resistant and one DM-susceptible were studied in detail for experimental dose-response resistance mechanisms. Herbicide rates that inhibited shoot growth by 50% (GR50) were determined for DM, being the resistance factor (GR50R/GR50S) of 43.81. When amitrole (Cyt. P450 inhibitor) was applied before treatment with DM, the R biotype growth was significantly inhibited (GR50 of 1019.9 g ai ha(-1)) compared with the GR50 (1484.6 g ai ha(-1)) found for the R biotype without pretreatment with amitrole. However, GR50 values for S biotype do not vary with or without amitrole pretreatment. Dose-response experiments carried out to evaluate cross-resistance, showed resistance to aryloxyphenoxypropionate (APP), cyclohexanedione (CHD) and phenylpyrazoline (PPZ) inhibiting herbicides. Both R and S biotypes had a similar (14)C-DM uptake and translocation. The herbicide was poorly distributed among leaves, the rest of the shoot and roots with unappreciable acropetal and/or basipetal DM translocation at 96 h after treatment (HAT). The metabolism of (14)C-DM, D-acid and D-conjugate metabolites were identified by thin-layer chromatography. The results showed that DM resistance in C. echinatus is likely due to enhanced herbicide metabolism, involving Cyt. P450 as was demonstrated by indirect assays (amitrole pretreatment). The ACCase in vitro assays showed that the target site was very sensitive to APP, CHD and PPZ herbicides in the C. echinatus S biotype, while the R biotype was insensitive to the previously mentioned herbicides. DNA sequencing studies confirmed that C. echinatus cross-resistance to ACCase inhibitors has been conferred by specific ACCase double point mutations Ile-2041-Asn and Cys-2088-Arg. PMID:27148285

  6. A missense mutation in ALDH1A3 causes isolated microphthalmia/anophthalmia in nine individuals from an inbred Muslim kindred.

    Science.gov (United States)

    Mory, Adi; Ruiz, Francesc X; Dagan, Efrat; Yakovtseva, Evgenia A; Kurolap, Alina; Parés, Xavier; Farrés, Jaume; Gershoni-Baruch, Ruth

    2014-03-01

    Nine affected individuals with isolated anophthalmia/microphthalmia from a large Muslim-inbred kindred were investigated. Assuming autosomal-recessive mode of inheritance, whole-genome linkage analysis, on DNA samples from four affected individuals, was undertaken. Homozygosity mapping techniques were employed and a 1.5-Mbp region, homozygous in all affected individuals, was delineated. The region contained nine genes, one of which, aldehyde dehydrogenase 1 (ALDH1A3), was a clear candidate. This gene seems to encode a key enzyme in the formation of a retinoic-acid gradient along the dorsoventral axis during an early eye development and the development of the olfactory system. Sanger sequence analysis revealed a missense mutation, causing a substitution of valine (Val) to methionine (Met) at position 71. Analyzing the p.Val71Met missense mutation using standard open access software (MutationTaster online, PolyPhen, SIFT/PROVEAN) predicts this variant to be damaging. Enzymatic activity, studied in vitro, showed no changes between the mutated and the wild-type ALDH1A3 protein.

  7. The suitability of biotypes Q and B of Bemisia tabaci (Gennadius) (Hemiptera: Aleyrodidae) at different nymphal instars as hosts for Encarsia formosa Gahan (Hymenoptera: Aphelinidae).

    Science.gov (United States)

    Liu, Xin; Zhang, Youjun; Xie, Wen; Wu, Qingjun; Wang, Shaoli

    2016-01-01

    Encarsia formosa Gahan (Hymenoptera: Aphelinidae) is a solitary endoparasitoid that is commercially reared and released for augmentative biological control of whiteflies infesting greenhouse crops. In most areas in China, the invasive and destructive whitefly Bemisia tabaci (Gennadius) (Hemiptera: Aleyrodidae) biotype Q has replaced B. tabaci biotype B and has become dominant between the two. A better understanding of the suitability of different nymphal instars of B. tabaci biotypes Q and B as hosts for E. formosa is needed to improve the use of this parasitoid for biological control. Parasitism of the four nymphal instars of B. tabaci biotypes Q and B by the commercial strain of E. formosa mass reared on Trialeurodes vaporariorum (Westwood) (Hemiptera: Aleyrodidae) was assessed in the laboratory. The results indicated that E. formosa parasitized and successfully developed on all instars of both biotypes but performed best on the 3rd instar of B. tabaci biotype B and on the 2nd, 3rd, and 4th instars of B. tabaci biotype Q. The host-feeding rate of the adult parasitoid was generally higher on nymphal instars of B. tabaci biotype Q than on the corresponding nymphal instars of biotype B and was significantly higher on the 2nd and 3rd instars. For both whitefly biotypes, the parasitoid's immature developmental period was the longest on the 1st instar, intermediate on the 2nd and 3rd instars, and the shortest on the 4th instar. The parasitoid emergence rate was significantly lower on the 1st instar than on the other three instars and did not significantly differ between B. tabaci biotype B and biotype Q. Offspring longevity was greater on the 3rd and 4th instars than on the 1st instar and did not significantly differ between the two B. tabaci biotypes. The results indicate that commercially-produced E. formosa can parasitize all instars of B. tabaci biotypes B and Q, making this parasitoid a promising tool for the management of the two biotypes of B. tabaci present in

  8. The suitability of biotypes Q and B of Bemisia tabaci (Gennadius) (Hemiptera: Aleyrodidae) at different nymphal instars as hosts for Encarsia formosa Gahan (Hymenoptera: Aphelinidae).

    Science.gov (United States)

    Liu, Xin; Zhang, Youjun; Xie, Wen; Wu, Qingjun; Wang, Shaoli

    2016-01-01

    Encarsia formosa Gahan (Hymenoptera: Aphelinidae) is a solitary endoparasitoid that is commercially reared and released for augmentative biological control of whiteflies infesting greenhouse crops. In most areas in China, the invasive and destructive whitefly Bemisia tabaci (Gennadius) (Hemiptera: Aleyrodidae) biotype Q has replaced B. tabaci biotype B and has become dominant between the two. A better understanding of the suitability of different nymphal instars of B. tabaci biotypes Q and B as hosts for E. formosa is needed to improve the use of this parasitoid for biological control. Parasitism of the four nymphal instars of B. tabaci biotypes Q and B by the commercial strain of E. formosa mass reared on Trialeurodes vaporariorum (Westwood) (Hemiptera: Aleyrodidae) was assessed in the laboratory. The results indicated that E. formosa parasitized and successfully developed on all instars of both biotypes but performed best on the 3rd instar of B. tabaci biotype B and on the 2nd, 3rd, and 4th instars of B. tabaci biotype Q. The host-feeding rate of the adult parasitoid was generally higher on nymphal instars of B. tabaci biotype Q than on the corresponding nymphal instars of biotype B and was significantly higher on the 2nd and 3rd instars. For both whitefly biotypes, the parasitoid's immature developmental period was the longest on the 1st instar, intermediate on the 2nd and 3rd instars, and the shortest on the 4th instar. The parasitoid emergence rate was significantly lower on the 1st instar than on the other three instars and did not significantly differ between B. tabaci biotype B and biotype Q. Offspring longevity was greater on the 3rd and 4th instars than on the 1st instar and did not significantly differ between the two B. tabaci biotypes. The results indicate that commercially-produced E. formosa can parasitize all instars of B. tabaci biotypes B and Q, making this parasitoid a promising tool for the management of the two biotypes of B. tabaci present in

  9. Utility of MtCOI polymerase chain reaction-restriction fragment length polymorphism in differentiating between Q and B whitefly Bemisia tabaci biotypes

    Institute of Scientific and Technical Information of China (English)

    Wei-Hua Ma; Xian-Chun Li; Timothy J. Dennehy; Chao-Liang Lei; Mo Wang; Benjamin A. Degain; Robert L. Nichols

    2009-01-01

    The invasive, insecticide-resistant, Q whitefly biotype, has gradually spread to other countries including the US via human-mediated movement of plant materials. We assessed the utility of the VspI-based mtCOl (mitochondrion cytochrome oxidase I) polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP) tech-nique as a rapid, cost-effective, and reliable alternative for differentiating the Q from the dominant B biotype in Arizona. Using the standard mtCOI gene sequencing and mtCOI PCR-RFLP techniques, we biotyped eight whitefly strains of five individuals each collected from poinsettia and cotton at different locations in Arizona. Complete concordance was observed between the two methods, with three strains being identified as the Q biotype and five samples as the B biotype. We also scanned the mtCOI gene sequences for VspI polymorphisms in the B and Q biotype whiteflies currently available in the GenBank database. This global screening revealed the existence of three and four VspI polymorphic types for the Q and B biotypes, respectively. Nevertheless, all three VspI polymorphic Q biotype whiteflies shared a common and unique VspI site that can be used to differentiate Q biotype from the four VspI polymorphic B biotype whiteflies identified. These results demonstrate that the VspI-based mtCOI gene PCR-RFLP provides a reliable diagnostic tool for differentiating the Q and B biotype whiteflies in the US and elsewhere.

  10. Citrus fruit flavor and aroma biosynthesis: isolation, functional characterization, and developmental regulation of Cstps1, a key gene in the production of the sesquiterpene aroma compound valencene.

    Science.gov (United States)

    Sharon-Asa, Liat; Shalit, Moshe; Frydman, Ahuva; Bar, Einat; Holland, Doron; Or, Etti; Lavi, Uri; Lewinsohn, Efraim; Eyal, Yoram

    2003-12-01

    Citrus fruits possess unique aromas rarely found in other fruit species. While fruit flavor is composed of complex combinations of soluble and volatile compounds, several low-abundance sesquiterpenes, such as valencene, nootkatone, alpha-sinensal, and beta-sinensal, stand out in citrus as important flavor and aroma compounds. The profile of terpenoid volatiles in various citrus species and their importance as aroma compounds have been studied in detail, but much is still lacking in our understanding of the physiological, biochemical, and genetic regulation of their production. Here, we report on the isolation, functional expression, and developmental regulation of Cstps1, a sesquiterpene synthase-encoding gene, involved in citrus aroma formation. The recombinant enzyme encoded by Cstps1 was shown to convert farnesyl diphosphate to a single sesquiterpene product identified as valencene by gas chromatography-mass spectrometry (GC-MS). Phylogenetic analysis of plant terpene synthase genes localized Cstps1 to the group of angiosperm sesquiterpene synthases. Within this group, Cstps1 belongs to a subgroup of citrus sesquiterpene synthases. Cstps1 was found to be developmentally regulated: transcript was found to accumulate only towards fruit maturation, corresponding well with the timing of valencene accumulation in fruit. Although citrus fruits are non-climacteric, valencene accumulation and Cstps1 expression were found to be responsive to ethylene, providing further evidence for the role of ethylene in the final stages of citrus fruit ripening. Isolation of the gene encoding valencene synthase provides a tool for an in-depth study of the regulation of aroma compound biosynthesis in citrus and for metabolic engineering for fruit flavor characteristics. PMID:14617067

  11. Tomato yellow leaf curl virus infection of tomato does not affect the performance of the Q and ZHJ2 biotypes of the viral vector Bemisia tabaci

    Institute of Scientific and Technical Information of China (English)

    Meng Li; Jian Liu; Shu-Sheng Liu

    2011-01-01

    To better understand the etiology of begomovirus epidemics in regions under invasion we need to know how indigenous and invasive whitefly vectors respond to virus infection.We investigated both direct and indirect effects of infection with Tomato yellow leaf curl virus(TYLCV)on the performance of the invasive Q biotype and the indigenous Asian ZHJ2 biotype of whitefly Bemisia tabaci.The Q biotype performed better than the ZHJ2 biotype on either uninfected or virus-infected tomato plants.However,virus-infection of host plants did not,or only marginally affected,the performance of either biotype of whiteflies m terms of fecundity,longevity,survival,development and population increase.Likewise,association of the vectors with TYLCV did not affect fecundity and longevity of the Q or ZHJ2 biotypes on cotton,a non-host of TYLCV.These results indicate that the alien Q biotype whitefly,but not the indigenous ZHJ2 biotype,is likely to become the major vector of TYLCV in the field and facilitate virus epidemics.

  12. An Exploratory Study on Assessment of Gingival Biotype and Crown Dimensions as Predictors for Implant Esthetics Comparing Caucasian and Indian Subjects

    NARCIS (Netherlands)

    Patil, Ratnadeep; van Brakel, Ralph; Mahesh, Kavita; de Putter, Cornelius; Cune, Marco S.

    2013-01-01

    Gingival biotype and crown dimensions may be important predictors for the esthetic outcome of surgical procedures. However, the visual distinction between "thick" and "thin" biotype may not be a suitable predictive parameter of surgical outcome. Intraoral photographs of 73 Indian and Dutch subjects

  13. Insights into the extremotolerance of Acinetobacter radioresistens 50v1, a gram-negative bacterium isolated from the Mars Odyssey spacecraft.

    Science.gov (United States)

    McCoy, K B; Derecho, I; Wong, T; Tran, H M; Huynh, T D; La Duc, M T; Venkateswaran, K; Mogul, R

    2012-09-01

    The microbiology of the spacecraft assembly process is of paramount importance to planetary exploration, as the biological contamination that can result from remote-enabled spacecraft carries the potential to impact both life-detection experiments and extraterrestrial evolution. Accordingly, insights into the mechanisms and range of extremotolerance of Acinetobacter radioresistens 50v1, a Gram-negative bacterium isolated from the surface of the preflight Mars Odyssey orbiter, were gained by using a combination of microbiological, enzymatic, and proteomic methods. In summary, A. radioresistens 50v1 displayed a remarkable range of survival against hydrogen peroxide and the sequential exposures of desiccation, vapor and plasma phase hydrogen peroxide, and ultraviolet irradiation. The survival is among the highest reported for non-spore-forming and Gram-negative bacteria and is based upon contributions from the enzyme-based degradation of H(2)O(2) (catalase and alkyl hydroperoxide reductase), energy management (ATP synthase and alcohol dehydrogenase), and modulation of the membrane composition. Together, the biochemical and survival features of A. radioresistens 50v1 support a potential persistence on Mars (given an unintended or planned surface landing of the Mars Odyssey orbiter), which in turn may compromise the scientific integrity of future life-detection missions.

  14. Insights into the extremotolerance of Acinetobacter radioresistens 50v1, a gram-negative bacterium isolated from the Mars Odyssey spacecraft.

    Science.gov (United States)

    McCoy, K B; Derecho, I; Wong, T; Tran, H M; Huynh, T D; La Duc, M T; Venkateswaran, K; Mogul, R

    2012-09-01

    The microbiology of the spacecraft assembly process is of paramount importance to planetary exploration, as the biological contamination that can result from remote-enabled spacecraft carries the potential to impact both life-detection experiments and extraterrestrial evolution. Accordingly, insights into the mechanisms and range of extremotolerance of Acinetobacter radioresistens 50v1, a Gram-negative bacterium isolated from the surface of the preflight Mars Odyssey orbiter, were gained by using a combination of microbiological, enzymatic, and proteomic methods. In summary, A. radioresistens 50v1 displayed a remarkable range of survival against hydrogen peroxide and the sequential exposures of desiccation, vapor and plasma phase hydrogen peroxide, and ultraviolet irradiation. The survival is among the highest reported for non-spore-forming and Gram-negative bacteria and is based upon contributions from the enzyme-based degradation of H(2)O(2) (catalase and alkyl hydroperoxide reductase), energy management (ATP synthase and alcohol dehydrogenase), and modulation of the membrane composition. Together, the biochemical and survival features of A. radioresistens 50v1 support a potential persistence on Mars (given an unintended or planned surface landing of the Mars Odyssey orbiter), which in turn may compromise the scientific integrity of future life-detection missions. PMID:22917036

  15. A new biotype of Fusarium oxysporum f. sp. lycopersici race 2 emerged by a transposon-driven mutation of avirulence gene AVR1.

    Science.gov (United States)

    Kashiwa, Takeshi; Suzuki, Tatsuya; Sato, Akira; Akai, Kotaro; Teraoka, Tohru; Komatsu, Ken; Arie, Tsutomu

    2016-07-01

    Emergence of races in Fusarium oxysporum f. sp. lycopersici (Fol) is caused by loss or mutation of at least one avirulence (AVR) gene. The product of AVR1 is a small protein (Avr1) secreted by Fol in tomato xylem sap during infection. This protein triggers Fol race 1 specific resistance (I) in tomato, indicating that AVR1 is an AVR gene. Deletion of AVR1 in race 1 resulted in the emergence of race 2, and an additional mutation in AVR2 generated race 3. Previously, we reported a new biotype of race 3, KoChi-1, in which AVR1 was truncated by a transposon Hormin, which suggested a new route to evolution of races in Fol However, to date no race 2 isolate carrying Hormin-truncated AVR1 has been reported. In this report, we describe such isolates, represented by Chiba-5, in which Hormin insertion occurred in AVR1 at a position different from that in KoChi-1. AVR1 truncation in both isolates resulted in production of defective Avr1 proteins. Chiba-5 and KoChi-1 belong to different phylogenetic clades, A1 and A2, respectively, suggesting that insertion of Hormin in AVR1 in Chiba-5 and KoChi-1 occurred as independent evolutionary events. PMID:27190160

  16. Human immunodeficiency virus type 1 stimulatory activity by Gardnerella vaginalis: relationship to biotypes and other pathogenic characteristics.

    Science.gov (United States)

    Simoes, J A; Hashemi, F B; Aroutcheva, A A; Heimler, I; Spear, G T; Shott, S; Faro, S

    2001-07-01

    Stimulation of human immunodeficiency virus (HIV) type 1 expression by Gardnerella vaginalis is one possible cause for an increase in the amount of virus in the genital tract. The ability of G. vaginalis to induce HIV expression in chronically infected U1 cells was investigated, along with its possible relationship to biotype, genotype, and resistance to metronidazole and bacteriocin. Significant HIV stimulatory activity was found in 5 (50%) lysates of G. vaginalis. The ability to induce HIV expression in U1 cells was statistically associated with G. vaginalis biotype (P=.048) but not with genotype or resistance to metronidazole and bacteriocin. Further studies to explore the in vivo relevance of HIV activation by G. vaginalis in the female genital tract are warranted, since prevention strategies of bacterial vaginosis and colonization by certain biotypes of G. vaginalis may be valuable in reducing the risk of sexual transmission of HIV.

  17. Resistance of soybean genotypes to Bemisia tabaci (Genn.) Biotype B (Hemiptera: Aleyrodidae).

    Science.gov (United States)

    Vieira, S S; Bueno, A F; Boff, M I C; Bueno, R C O F; Hoffman-Campo, C B

    2011-01-01

    The silverleaf whitefly Bemisia tabaci (Genn.) biotype B has become a serious problem for soybean cultivation because it can significantly reduce soybean productivity. The use of soybean cultivars resistant to whitefly attack is an important strategy in an integrated pest management (IPM) program. This study evaluated the preference for oviposition and colonization by B. tabaci biotype B on different soybean genotypes. In the free-choice test, the genotypes studied were 'IAC 17' and 'IAC 19' as the standards for resistance and 'IAC Holambra Stwart' as the standard for susceptibility, as well as BABR01-0492, BABR01-0173, BABR01-1259, BABR01-1576, BABR99-4021HC, BABR99-4021HP, 'Barreiras', 'Conquista', 'Corisco', 'BRS Gralha', PI274454, PI227687, and PI171451. In the no-choice test, the four best genotypes selected in the free-choice test, in addition to the susceptible and resistant standards were evaluated. Our data indicated 'Barreiras' as the most resistant genotype against B. tabaci biotype B. 'BRS Gralha', which was the least attractive to whitefly adults in the free-choice test, did not show resistance to insect attack when they were confined in cages in the no-choice test. Despite the high number of eggs observed, BABR01-1576 and BABR99-4021HC showed a reduced number of nymphs, indicating antibiosis. The genotypes with a high level of resistance can be used as a tool against B. tabaci in IPM or as a source of resistance in plant-breeding programs.

  18. Potential adaptation of a Q biotype whitefly population from poinsettia to field crops

    Institute of Scientific and Technical Information of China (English)

    Xiangshun Hu; Timothy J. Dennehy; Xinzhi Ni; Huiyan Zhao; Robert L. Nichols; Xianchun Li

    2011-01-01

    The invasive Q biotype whitefly was first detected in the US on poinsettia in 2004 and is still not a pest outside of greenhouse environments in the US.To assess the potential for the establishment of the Q biotype on field crops,population cage experiments were conducted to compare the performance of a poinsettia-derived Q population named P'06 on poinsettia and six field crops (alfalfa,tomato,melon,cotton,cowpea and cabbage).P'06 adults reared on poinsettia as nymphs laid eggs on all six field crops.Significantly more eggs were laid on alfalfa,tomato,melon and cotton than on cabbage,cowpea and poinsettia.These eggs hatched and the nymphs developed to adults on the six field crops.Relative to poinsettia,whitefly survival was similar on cowpea,alfalfa,tomato and cabbage,but significantly higher on cotton and melon.Moreover,P'06 had significantly shorter development times from egg to adult on cotton,melon,cowpea,tomato and alfalfa than they did on poinsettia.However,the F 1 adults raised on the six field crops had significantly shorter lifespans and laid 11- to 18-fold fewer eggs than did the F1 adults raised on poinsettia.Taken together,while P'06 may have some potential to establish on field crops,the shorter lifespans and extremely low fecundities of the F1 adults raised on the six field crops suggests that P'06 is incapable of rapidly adapting to them.Poor adaptation to field crops may explain,at least partially,why the Q biotype has not established in the US field system.

  19. Inflammatory effects of BaP1 a metalloproteinase isolated from Bothrops asper snake venom: leukocyte recruitment and release of cytokines.

    Science.gov (United States)

    Fernandes, Cristina Maria; Zamuner, Stella Regina; Zuliani, Juliana Pavan; Rucavado, Alexandra; Gutiérrez, José Maria; Teixeira, Catarina de Fátima Pereira

    2006-04-01

    The inflammatory events induced by BaP1, a 22.7 kDa metalloproteinase isolated from Bothrops asper snake venom, were studied. BaP1 i.p. injection in mice induced a marked inflammatory cell infiltrate into peritoneal cavity of animals with predominance of neutrophils in the early phase followed by mononuclear cells in the late period. Inhibition of enzymatic activity of BaP1 by chelation with EDTA resulted in a drastic reduction of this effect. In addition, BaP1 induced a significant increase of blood neutrophil numbers before its accumulation in peritoneal cavity, thus suggesting a stimulatory action of BaP1 on mechanisms of cell mobilization from bone marrow reserve compartments. A reduction in the number of neutrophils was observed in the exudate when antibodies against LECAM-1, CD18 and LFA-1 were used, suggesting the involvement of these adhesion molecules in the effects of BaP1. In contrast, there was no effect with antibodies against ICAM-1 and PECAM-1. Moreover, a conspicuous increment in the levels of IL-1 and TNF-alpha, but not of LTB4, was observed in peritoneal washes collected from mice injected with BaP1. It is concluded that BaP1 induces in vivo a marked leukocyte influx, which parallels an increased number of these cells in the blood, and is associated to the expression of specific leukocyte adhesion molecules and release of chemotactic inflammatory cytokines. Since BaP1 is a P-I class metalloproteinase, these results indicate that the proteolytic domain of metalloproteinases per se can trigger specific inflammatory events. PMID:16529786

  20. Effects of selected fertilizers on the life history of Bemisia tabaci (Hemiptera: Aleyrodidae) biotype B.

    Science.gov (United States)

    England, K M; Sadof, C S; Cañnas, L A; Kuniyoshi, C H; Lopez, R G

    2011-04-01

    We tested the effects among a purportedly sustainable water-soluble fertilizer, a conventional water-soluble fertilizer, an alternation of these, a controlled-release fertilizer, and a clear water control on the life-history traits of sweetpotato whitefly, Bemisia tabaci (Gennadius) (Hemiptera: Aleyrodidae; =Bemisia argentifolii Bellows & Perring) biotype B reared on poinsettia (Euphorbia pulcherrima Willdenow ex Klotzch). Free amino acids in petioles were measured to estimate plant nutrient assimilation and phloem nutritional quality for B. tabaci biotype B. The sustainable fertilizer produced plants with the highest concentration of amino acids. In contrast, fecundity of whiteflies was lowest in plants treated with the sustainable fertilizer and the water control. The relationship between total amino acids in phloem and survival was significantly quadratic, with the highest survival at intermediate levels. Fecundity, however, was negatively correlated with total amino acid content of the maternal host plant. Variation in total amino acid concentration in petioles of plants treated within fertilizer treatments makes it difficult to predict whether a particular fertilizer will produce plants with enough amino acids to deleteriously affect both survivorship and fecundity and yet yield a plant of good quality. Despite this limitation, we can conclude that the use of this sustainable fertilizer will not cause increases in whitefly populations relative to plants fertilized with water-soluble and slow-release fertilizers that deliver the same level of nitrogen to the plant. PMID:21510203

  1. Effects of selected fertilizers on the life history of Bemisia tabaci (Hemiptera: Aleyrodidae) biotype B.

    Science.gov (United States)

    England, K M; Sadof, C S; Cañnas, L A; Kuniyoshi, C H; Lopez, R G

    2011-04-01

    We tested the effects among a purportedly sustainable water-soluble fertilizer, a conventional water-soluble fertilizer, an alternation of these, a controlled-release fertilizer, and a clear water control on the life-history traits of sweetpotato whitefly, Bemisia tabaci (Gennadius) (Hemiptera: Aleyrodidae; =Bemisia argentifolii Bellows & Perring) biotype B reared on poinsettia (Euphorbia pulcherrima Willdenow ex Klotzch). Free amino acids in petioles were measured to estimate plant nutrient assimilation and phloem nutritional quality for B. tabaci biotype B. The sustainable fertilizer produced plants with the highest concentration of amino acids. In contrast, fecundity of whiteflies was lowest in plants treated with the sustainable fertilizer and the water control. The relationship between total amino acids in phloem and survival was significantly quadratic, with the highest survival at intermediate levels. Fecundity, however, was negatively correlated with total amino acid content of the maternal host plant. Variation in total amino acid concentration in petioles of plants treated within fertilizer treatments makes it difficult to predict whether a particular fertilizer will produce plants with enough amino acids to deleteriously affect both survivorship and fecundity and yet yield a plant of good quality. Despite this limitation, we can conclude that the use of this sustainable fertilizer will not cause increases in whitefly populations relative to plants fertilized with water-soluble and slow-release fertilizers that deliver the same level of nitrogen to the plant.

  2. Studies on the Host Biotypes and Its Cause of Cotton Aphid in Nanjing, China

    Institute of Scientific and Technical Information of China (English)

    LIU Xiang-dong; ZHAI Bao-ping; ZHANG Xiao-xi

    2002-01-01

    The fitness of cotton aphid, Aphis gossypii Glover, on different host plants was studied. The results showed that the cotton aphid population in Nanjing formed host preference bio-types on cucumber and cotton. The aphids from cotton and cucumber could not inter-transplant successfully between the two host plants. The apterous and alate offspring of stem mother from hibiscus could not survive, reproduce and form population normally when they were transplanted to cucumber and water melon, but they could form normally when transplanted to cotton and muskmelon. There was no significant difference between the stylet length of cotton aphids from cucumber and cotton, so the stylet length was not the cause of the host preference. When the aphids originated on hibiscus were transplanted to cotton, water melon and muskmelon, the stylet could reach host phloem to absorb host plant's nutrients, but it couldn't when transplanted to cucumber. Cotton aphid can feed on muskmelon without secretion of water-soluble saliva. It could be concluded that the two host biotypes of cotton aphid came from different winter host plants.

  3. Are three colonies of Neostromboceros albicomus, a candidate biological control agent for Lygodium microphyllum, the same host biotype?

    Science.gov (United States)

    Three colonies of Neostromboceros albicomus, a candidate biological control agent of Lygodium microphyllum, were barcoded using the D2 expansion domain, to determine which of two biotypes they represented. The first colony, collected in 2005 & 2007, was used for the initial host range testing. Colon...

  4. Do the U.S. Dioecious and Monoecious biotypes of Hydrilla verticillata L.F. Royle hybridize?

    Science.gov (United States)

    This technical note reports the results of two studies to address the question of whether the two hydrilla biotypes present in the U.S. can hybridize. These include whether hybridization can occur under controlled conditions and in field populations where the two hybrids coexist in close proximity ...

  5. Comparative evaluation of administration methods for a vaccine protecting rainbow trout against Yersinia ruckeri O1 biotype 2 infections

    DEFF Research Database (Denmark)

    Chettri, Jiwan Kumar; Deshmukh, Sidhartha; Holten-Andersen, Lars;

    2013-01-01

    Numerous outbreaks of enteric red mouth disease (ERM) caused by Yersinia ruckeri O1 biotype 2 in rainbow trout farms are currently being recorded despite established vaccination procedures against this disease. This could indicate that the currently used application of single immersion vaccination...

  6. The clinical application of non-biotype artificial liver support system to acute liver failure of children

    Institute of Scientific and Technical Information of China (English)

    葛许华

    2014-01-01

    Objective To explore the therapeutic effect of non-biotype artificial liver support system(NBALSS)in acute liver failure(ALF)of children by analyzing the data of16 children with ALF treated with plasma exchange(PE)and continuous venovenous hemodiafiltration(CVVHDF)in the past 2 years.Methods A total of 16 children with ALF in PICU admitted

  7. Improved DNA barcoding method for Bemisia tabaci and related Aleyrodidae: development of universal and Bemisia tabaci biotype-specific mitochondrial cytochrome c oxidase I polymerase chain reaction primers.

    Science.gov (United States)

    Shatters, Robert G; Powell, Charles A; Boykin, Laura M; Liansheng, He; McKenzie, C L

    2009-04-01

    Whiteflies, heteropterans in the family Aleyrodidae, are globally distributed and severe agricultural pests. The mitochondrial cytochrome c oxidase I (mtCOI) sequence has been used extensively in whitefly phylogenetic comparisons and in biotype identification of the agriculturally important Bemisia tabaci (Gennadius) whitefly. Because of the economic importance of several whitefly genera, and the invasive nature of the B and the Q biotypes of Bemisia tabaci, mtCOI sequence data are continually generated from sampled populations worldwide. Routine phylogenetic comparisons and biotype identification is done through amplification and sequencing of an approximately 800-bp mtCOI DNA fragment. Despite its routine use, published primers for amplification of this region are often inefficient for some B. tabaci biotypes and especially across whitefly species. Through new sequence generation and comparison to available whitefly mtCOI sequence data, a set of polymerase chain reaction (PCR) amplification primers (Btab-Uni primers) were identified that are more efficient at amplifying approximately 748 bp of the approximately 800-bp fragment currently used. These universal primers amplify an mtCOI fragment from numerous B. tabaci biotypes and whitefly genera by using a single amplification profile. Furthermore, mtCOI PCR primers specific for the B, Q, and New World biotypes of B. tabaci were designed that allow rapid discrimination among these biotypes. These primers produce a 478-, 405-, and 303-bp mtCOI fragment for the B, New World, and Q biotypes, respectively. By combining these primers and using rapid PCR and electrophoretic techniques, biotype determination can be made within 3 h for up to 96 samples at a time.

  8. Complete Genome Sequence of Bacillus pumilus PDSLzg-1, a Hydrocarbon-Degrading Bacterium Isolated from Oil-Contaminated Soil in China

    Science.gov (United States)

    Hao, Kun; Li, Hongna; Li, Feng

    2016-01-01

    Bacillus pumilus strain PDSLzg-1, an efficient hydrocarbon-degrading bacterium, was isolated from oil-contaminated soil. Here, we present the complete sequence of its circular chromosome and circular plasmid. The genomic information is essential for the study of degradation of oil by B. pumilus PDSLzg-1.

  9. Draft Genome Sequence of Halomonas sp. Strain HAL1, a Moderately Halophilic Arsenite-Oxidizing Bacterium Isolated from Gold-Mine Soil

    OpenAIRE

    Lin, Yanbing; Fan, Haoxin; Hao, Xiuli; Johnstone, Laurel; Hu, Yao; Wei, Gehong; Alwathnani, Hend A.; Wang, Gejiao; Rensing, Christopher

    2012-01-01

    We report the draft genome sequence of arsenite-oxidizing Halomonas sp. strain HAL1, isolated from the soil of a gold mine. Genes encoding proteins involved in arsenic resistance and transformation, phosphate utilization and uptake, and betaine biosynthesis were identified. Their identification might help in understanding how arsenic and phosphate metabolism are intertwined.

  10. Biochemical Characterization of CPS-1, a Subclass B3 Metallo-β-Lactamase from a Chryseobacterium piscium Soil Isolate

    DEFF Research Database (Denmark)

    Gudeta, Dereje Dadi; Pollini, Simona; Docquier, Jean-Denis;

    2016-01-01

    CPS-1 is a subclass B3 metallo-β-lactamase from a Chryseobacterium piscium isolated from soil, showing 68 % amino acid identity to GOB-1 enzyme. CPS-1 was overproduced in Escherichia coli Rosetta (DE3), purified by chromatography and biochemically characterized. This enzyme exhibits a broad...

  11. Complete Genome Sequence of Phodopus sungorus Papillomavirus Type 1 (PsPV1), a Novel Member of the Pipapillomavirus Genus, Isolated from a Siberian Hamster.

    Science.gov (United States)

    Kocjan, Boštjan J; Hošnjak, Lea; Račnik, Joško; Zadravec, Marko; Poljak, Mario

    2014-04-10

    We report the complete genomic sequence of Phodopus sungorus papillomavirus type 1 (PsPV1), isolated from an anogenital lesion of a Siberian hamster. PsPV1 is taxonomically classified in the genus Pipapillomavirus and is most closely related to Mesocricetus auratus papillomavirus 1 (MaPV1).

  12. Interspecific interactions between Bemisia tabaci biotype B and Trialeurodes vaporariorum (Hemiptera: Aleyrodidae).

    Science.gov (United States)

    Zhang, Gui-Fen; Li, Dong-Chao; Liu, Tong-Xian; Wan, Fang-Hao; Wang, Jin-Jun

    2011-02-01

    Bemisia tabaci (Gennadius) biotype B and Trialeurodes vaporariorum (Westwood) are invasive whitefly species that often co-occur on greenhouse-grown vegetables in northern China. Although B. tabaci biotype B has been present in China for a relatively short period of time, it has become dominant over T. vaporariorum. We studied the interspecific competitive interactions between the two species in single or mixed cultures at 24 ± 1 °C, 40 ± 5% RH, and L14:D10 h photoperiod. Female longevity on tomato was not significantly different between species, but B. tabaci reproduced 4.3 to 4.9 fold more progeny. The ratio of female to male progeny in both instances was greater for B. tabaci. When cultured on tomato, cotton, and tobacco, B. tabaci developed 0.8, 3.3, and 4.7 d earlier in single culture, and 1.8, 3.9, and 4.3 d earlier in mixed culture. B. tabaci displaced T. vaporariorum in four, five and six generations when the initial ratios of B. tabaci to T. vaporariorum were 15:15, 20:10, or 10:20 on tomato. Populations of B. tabaci were 2.3 fold higher than that of T. vaporariorum on tomato plants for seven consecutive generations in single culture. B. tabaci performed better in development, survival, fecundity, and female ratio. We conclude that B. tabaci could displace T. vaporariorum in as short as four generations in a controlled greenhouse environment when they start at equal proportions. Warmer greenhouse conditions and an increase in total greenhouse area could be contributing factors in the recent dominance of B. tabaci.

  13. Stable isotope resolved metabolomics revealed the role of anabolic and catabolic processes in glyphosate-induced amino acid accumulation in Amaranthus palmeri biotypes

    Science.gov (United States)

    Using stable isotope resolved metabolomics (SIRM), we characterized the role of anabolic (de novo synthesis) vs catabolic (protein catalysis) processes contributing to free amino acid pools in glyphosate susceptible (S) and resistant (R) Amaranthus palmeri biotypes. Following exposure to glyphosate ...

  14. Isolation and identification of bovine Brucella isolates from Pakistan by biochemical tests and PCR.

    Science.gov (United States)

    Ali, Shahzad; Ali, Qurban; Melzer, Falk; Khan, Iahtasham; Akhter, Shamim; Neubauer, Heinrich; Jamal, Syed M

    2014-01-01

    Brucellosis is endemic in bovines in Pakistan. The Brucella species and biovars involved, however, are unknown. The objectives of the present study were to isolate and characterize brucellae from seropositive milk samples, aborted fetuses, and vaginal swabs of cattle and buffaloes which had recently aborted. The seropositive milk samples, aborted fetuses, and vaginal swabs of cattle and buffaloes were collected from the Potohar Plateau, Pakistan. Isolation of brucellae was done on modified Farrell's serum dextrose agar. Isolates were characterized by conventional biotyping methods, while molecular typing was done by genus (B4/B5) and species-specific (Brucella abortus, Brucella melitensis, Brucella ovis, and Brucella suis) polymerase chain reaction (PCR). A total of 30 isolates were recovered from milk (n = 5), aborted fetuses (n = 13), and vaginal swabs (n = 12). Most isolates were from cattle (56.7 %). All of them were identified as B. abortus biovar 1 based on conventional biotyping methods and genus and species-specific PCR. This preliminary study provides the first report on the prevalence of B. abortus biovar 1 in cattle and buffaloes in Pakistan.

  15. Metabolic Profiling and Enzyme Analyses Indicate a Potential Role of Antioxidant Systems in Complementing Glyphosate Resistance in an Amaranthus palmeri Biotype.

    Science.gov (United States)

    Maroli, Amith S; Nandula, Vijay K; Dayan, Franck E; Duke, Stephen O; Gerard, Patrick; Tharayil, Nishanth

    2015-10-21

    Metabolomics and biochemical assays were employed to identify physiological perturbations induced by a commercial formulation of glyphosate in susceptible (S) and resistant (R) biotypes of Amaranthus palmeri. At 8 h after treatment (HAT), compared to the respective water-treated control, cellular metabolism of both biotypes were similarly perturbed by glyphosate, resulting in abundance of most metabolites including shikimic acid, amino acids, organic acids and sugars. However, by 80 HAT the metabolite pool of glyphosate-treated R-biotype was similar to that of the control S- and R-biotypes, indicating a potential physiological recovery. Furthermore, the glyphosate-treated R-biotype had lower reactive oxygen species (ROS) damage, higher ROS scavenging activity, and higher levels of potential antioxidant compounds derived from the phenylpropanoid pathway. Thus, metabolomics, in conjunction with biochemical assays, indicate that glyphosate-induced metabolic perturbations are not limited to the shikimate pathway, and the oxidant quenching efficiency could potentially complement the glyphosate resistance in this R-biotype.

  16. Metabolic Profiling and Enzyme Analyses Indicate a Potential Role of Antioxidant Systems in Complementing Glyphosate Resistance in an Amaranthus palmeri Biotype.

    Science.gov (United States)

    Maroli, Amith S; Nandula, Vijay K; Dayan, Franck E; Duke, Stephen O; Gerard, Patrick; Tharayil, Nishanth

    2015-10-21

    Metabolomics and biochemical assays were employed to identify physiological perturbations induced by a commercial formulation of glyphosate in susceptible (S) and resistant (R) biotypes of Amaranthus palmeri. At 8 h after treatment (HAT), compared to the respective water-treated control, cellular metabolism of both biotypes were similarly perturbed by glyphosate, resulting in abundance of most metabolites including shikimic acid, amino acids, organic acids and sugars. However, by 80 HAT the metabolite pool of glyphosate-treated R-biotype was similar to that of the control S- and R-biotypes, indicating a potential physiological recovery. Furthermore, the glyphosate-treated R-biotype had lower reactive oxygen species (ROS) damage, higher ROS scavenging activity, and higher levels of potential antioxidant compounds derived from the phenylpropanoid pathway. Thus, metabolomics, in conjunction with biochemical assays, indicate that glyphosate-induced metabolic perturbations are not limited to the shikimate pathway, and the oxidant quenching efficiency could potentially complement the glyphosate resistance in this R-biotype. PMID:26329798

  17. Stable Isotope Resolved Metabolomics Reveals the Role of Anabolic and Catabolic Processes in Glyphosate-Induced Amino Acid Accumulation in Amaranthus palmeri Biotypes.

    Science.gov (United States)

    Maroli, Amith; Nandula, Vijay; Duke, Stephen; Tharayil, Nishanth

    2016-09-21

    Biotic and abiotic stressors often result in the buildup of amino acid pools in plants, which serve as potential stress mitigators. However, the role of anabolic (de novo amino acid synthesis) versus catabolic (proteolytic) processes in contributing to free amino acid pools is less understood. Using stable isotope-resolved metabolomics (SIRM), we measured the de novo amino acid synthesis in glyphosate susceptible (S-) and resistant (R-) Amaranthus palmeri biotypes. In the S-biotype, glyphosate treatment at 0.4 kg ae/ha resulted in an increase in total amino acids, a proportional increase in both (14)N and (15)N amino acids, and a decrease in soluble proteins. This indicates a potential increase in de novo amino acid synthesis, coupled with a lower protein synthesis and a higher protein catabolism following glyphosate treatment in the S-biotype. Furthermore, the ratio of glutamine/glutamic acid (Gln/Glu) in the glyphosate-treated S- and R-biotypes indicated that the initial assimilation of inorganic nitrogen to organic forms is less affected by glyphosate. However, amino acid biosynthesis downstream of glutamine is disproportionately disrupted in the glyphosate treated S-biotype. It is thus concluded that the herbicide-induced amino acid abundance in the S-biotype is contributed by both protein catabolism and de novo synthesis of amino acids such as glutamine and asparagine.

  18. Biological parameters of Bemisia tabaci (Gennadius) biotype B (Hemiptera: Aleyrodidae) on Jatropha gossypiifolia, commercial (Manihot esculenta) and wild cassava (Manihot flabellifolia and M. carthaginensis) (Euphorbiaceae).

    Science.gov (United States)

    Carabalí, Arturo; Belloti, Anthony C; Montoya-Lerma, James

    2010-01-01

    Bemisia tabaci (Gennadius) is one of the most important pests of cassava in Africa and several countries of Asia due to the damage caused by direct feeding, the excretion of honeydew, and its capacity as a vector of cassava mosaic geminivirus. There is a general consensus that B. tabaci is a complex of morphologically indistinguishable populations with different biotypes. In the Americas, the polyphagous biotype B does not appear to feed on cassava. Recent studies indicate that it is possible, however, for biotype B to gradually adapt to cassava using phylogenetically related hosts. Therefore, the possibility that some wild species of cassava constitute intermediate hosts in the adaptation process may lead to the establishment of biotype B on commercial varieties of Manihot esculenta. In here, we evaluated Jatropha gossypiifolia, two wild species of cassava (Manihot flabellifolia and M. carthaginensis) and a commercial cassava variety (MCol 2063) as hosts of biotype B. The highest oviposition rate (2.7 eggs /two days) occurred on M. esculenta, although the development time (44 d) was the longest when compared to M. carthaginensis and J. gossypiifolia. About 60% of the population could reproduce on the wild cassava species vs. 55% on J. gossypiifolia and 27.5% on the commercial variety. Our data suggest that J. gossypiifolia is a suitable host and the wild species M. carthaginensis can constitute a potential intermediate host in the adaptation of biotype B to commercial varieties of cassava.

  19. Stable Isotope Resolved Metabolomics Reveals the Role of Anabolic and Catabolic Processes in Glyphosate-Induced Amino Acid Accumulation in Amaranthus palmeri Biotypes.

    Science.gov (United States)

    Maroli, Amith; Nandula, Vijay; Duke, Stephen; Tharayil, Nishanth

    2016-09-21

    Biotic and abiotic stressors often result in the buildup of amino acid pools in plants, which serve as potential stress mitigators. However, the role of anabolic (de novo amino acid synthesis) versus catabolic (proteolytic) processes in contributing to free amino acid pools is less understood. Using stable isotope-resolved metabolomics (SIRM), we measured the de novo amino acid synthesis in glyphosate susceptible (S-) and resistant (R-) Amaranthus palmeri biotypes. In the S-biotype, glyphosate treatment at 0.4 kg ae/ha resulted in an increase in total amino acids, a proportional increase in both (14)N and (15)N amino acids, and a decrease in soluble proteins. This indicates a potential increase in de novo amino acid synthesis, coupled with a lower protein synthesis and a higher protein catabolism following glyphosate treatment in the S-biotype. Furthermore, the ratio of glutamine/glutamic acid (Gln/Glu) in the glyphosate-treated S- and R-biotypes indicated that the initial assimilation of inorganic nitrogen to organic forms is less affected by glyphosate. However, amino acid biosynthesis downstream of glutamine is disproportionately disrupted in the glyphosate treated S-biotype. It is thus concluded that the herbicide-induced amino acid abundance in the S-biotype is contributed by both protein catabolism and de novo synthesis of amino acids such as glutamine and asparagine. PMID:27469508

  20. Promoter isolation and characterization of GhAO-like1, a Gossypium hirsutum gene similar to multicopper oxidases that is highly expressed in reproductive organs.

    Science.gov (United States)

    Lambret-Frotté, Julia; Artico, Sinara; Muniz Nardeli, Sarah; Fonseca, Fernando; Brilhante Oliveira-Neto, Osmundo; Grossi-de-Sá, Maria Fatima; Alves-Ferreira, Marcio

    2016-01-01

    Cotton is one of the most economically important cultivated crops. It is the major source of natural fiber for the textile industry and an important target for genetic modification for both biotic stress and herbicide tolerance. Therefore, the characterization of genes and regulatory regions that might be useful for genetic transformation is indispensable. The isolation and characterization of new regulatory regions is of great importance to drive transgene expression in genetically modified crops. One of the major drawbacks in cotton production is pest damage; therefore, the most promising, cost-effective, and sustainable method for pest control is the development of genetically resistant cotton lines. Considering this scenario, our group isolated and characterized the promoter region of a MCO (multicopper oxidase) from Gossypium hirsutum, named GhAO-like1 (ascorbate oxidase-like1). The quantitative expression, together with the in vivo characterization of the promoter region reveals that GhAO-like1 has a flower- and fruit-specific expression pattern. The GUS activity is mainly observed in stamens, as expected considering that the GhAO-like1 regulatory sequence is enriched in cis elements, which have been characterized as a target of reproductive tissue specific transcription factors. Both histological and quantitative analyses in Arabidopsis thaliana have confirmed flower (mainly in stamens) and fruit expression of GhAO-like1. In the present paper, we isolated and characterized both in silico and in vivo the promoter region of the GhAO-like1 gene. The regulatory region of GhAO-like1 might be useful to confer tissue-specific expression in genetically modified plants. PMID:26692462

  1. A Synthetic Butenolide Diterpene is now a Natural Product Isolated from Metaporana sericosepala, a Plant from the Madagascar Dry Forest[1a

    Science.gov (United States)

    Presley, Christopher C.; Rakotondraibe, L. Harinantenaina; Brodie, Peggy J.; Callmander, Martin W.; Randrianaivo, Richard; Rasamison, Vincent E.; Rakotobe, Etienne; Kingston, David G. I.

    2015-01-01

    Antiproliferative bioassay-guided fractionation of the ethanolic extract of the endemic Madagascan plant Metaporana sericosepala led to the first natural product isolation of a butenolide diterpene which was synthesized during an anti-inflammatory study in 1988. The structure of the compound was elucidated as 3-homofarnesyl-4-hydroxybutenolide (1) by analysis of its spectroscopic data, including 1D- and 2D-NMR data and chemical evidence. The once synthetic compound can now also be considered as a natural product. Compound 1 had modest antiproliferative activity towards the A2780 ovarian cancer cell line with an IC50 value of 8 μM. PMID:26435765

  2. Lethal and Inhibitory Activities of Plant-Derived Essential Oils Against Bemisia tabaci Gennadius (Hemiptera: Aleyrodidae) Biotype B in Tomato.

    Science.gov (United States)

    Fanela, T L M; Baldin, E L L; Pannuti, L E R; Cruz, P L; Crotti, A E M; Takeara, R; Kato, M J

    2016-04-01

    The silverleaf whitefly Bemisia tabaci (Genn.) biotype B (Hemiptera: Aleyrodidae) is one of the most severe tomato pests in the world. The damage caused by this insect may compromise up to 100% of crop production, and management of this pest has relied on spraying of synthetic insecticides. However, due to the environmental issues associated with this practice, alternative methods such as the use of botanical pesticides are now used as a strategy of integrated pest management (IPM). We evaluated the effects of essential oils of five plant species on B. tabaci biotype B in tomato and demonstrate that the essential oils (0.5%) of Piper callosum (PC-EO), Adenocalymma alliaceum (AA-EO), Pelargonium graveolens (PG-EO), and Plectranthus neochilus (PN-EO) inhibit the settlement and oviposition of B. tabaci biotype B adults in tomato plants. In fumigation tests, A. alliaceum (AA-EO) at 0.4 μL/L of air after 72 h and 0.1 μL/L of air after 6 h was the most effective against nymphs and adults of B. tabaci biotype B, respectively. The major chemical constituents of PC-EO were identified as being safrole (29.3%), α-pinene (19.2%), and β-pinene (14.3%), whereas diallyl trisulfide (66.9%) and diallyl disulfide (23.3%) were the major compounds identified in AA-EO. This is the first report on the reduction of oviposition by the use of P. callosum (PC-EO) and A. alliaceum (AA-EO). In addition, the fumigant effect of A. alliaceum (AA-EO) on nymphs and adults has also been reported here for the first time. PMID:26712319

  3. Effects of host plants on insecticide susceptibility and carboxylesterase activity in Bemisia tabaci biotype B and greenhouse whitefly, Trialeurodes vaporariorum.

    Science.gov (United States)

    Liang, Pei; Cui, Jian-Zhou; Yang, Xiu-Qing; Gao, Xi-Wu

    2007-04-01

    Bemisia tabaci (Gennadius) biotype B and the greenhouse whitefly, Trialeurodes vaporariorum (Westwood), have become serious pests of cotton and vegetable crops in China since the early 1990s. In recent years, however, B. tabaci have broken out more frequently and widely than have T. vaporariorum. The B. tabaci biotype B has also developed higher resistance to several insecticides. Here, the effects of four different host plants on the insecticide susceptibility of B. tabaci biotype B and T. vaporariorum have been compared. The LC(50) values of imidacloprid, abamectin, deltamethrin and omethoate in T. vaporariorum reared on cucumber were significantly higher than those in B. tabaci (the LC(50) values in T. vaporariorum were respectively 3.13, 2.63, 2.78 and 6.67 times higher than those in B. tabaci). On the other hand, the B. tabaci population reared on cotton was more tolerant to all four insecticides tested than the T. vaporariorum population from the same host, especially to abamectin (up to 8.4-fold). The effects of the four host plants on the activity of carboxylesterase (CarE) in B. tabaci biotype B and T. vaporariorum were also compared. The results showed that, although the CarE activity of B. tabaci and T. vaporariorum varied depending on the host plants, the B. tabaci population possessed significantly higher CarE activity than the T. vaporariorum population reared on the same host plant. This was especially so on cucumber and cotton, where the CarE activities of the B. tabaci population were over 1.6 times higher than those of T. varporariorum. The frequency profiles for this activity in B. tabaci and T. vaporariorum populations reared on same host plant were apparently different.

  4. Supportive periodontal therapy and periodontal biotype as prognostic factors in implants placed in patients with a history of periodontitis

    OpenAIRE

    Aguirre Zorzano, Luis Antonio; Vallejo Aisa, Francisco Javier; Estefanía Fresco, Ruth

    2013-01-01

    Objectives: To evaluate bone loss around implants placed in patients with a history of treated chronic periodontitis and who did or did not attend supportive periodontal therapy, after one year in function. Furthermore, the influence of periodontal biotype and level of plaque was also evaluated. Material and Methods: Forty-nine patients participated voluntarily in the study. All subjects had a history of chronic periodontitis, which had been previously treated. After the active treatment, 27 ...

  5. Isolation and Characterization of Plantaricin Produced by Lactobacillus plantarum Strains (IIA-1A5, IIA-1B1, IIA-2B2

    Directory of Open Access Journals (Sweden)

    I. I. Arief

    2013-08-01

    Full Text Available Bacteriocins produced by Indonesian lactic acid bacteria Lactobacillus plantarum IIA-1A5, IIA-1B1, IIA-2B2 were purified and characterized. Plantaricin W gene had been successfully amplified from all strains. This amplicon showed the expected 200 bp size of plantaricin W gene. This bacteriocins purified from L. plantarum IIA-1A5, IIA-1B1, and IIA-2B2 were named plantaricin IIA-1A5, IIA-1B1, and IIA-2B2. Purification by cation exchange chromatography increased the purity (fold and activity of plantaricins. Purity of plantaricin IIA-1A5 was increased by 3.13 fold with specific activity 13.40 AU/mg. Plantaricin IIA-1B1 had 2.98 fold purity with specific activity 5.12 AU/mg, while purity of plantaricin IIA-2B2 was 1.37 fold with specific activity 7.70 AU/mg. All plantaricins could inhibit the growth of pathogenic bacteria, such as Escherichia coli, Salmonella typhimurium, Bacillus cereus, and Staphylococcus aureus. Plantaricins could be digested by trypsin. Stability of plantaricins at 80 oC for 30 min and at 121 oC for 15 min were affected by type of plantaricin and species of pathogenic bacteria. Generally, plantaricin IIA-1A5 was better as antimicrobial agent than plantaricin IIA-1B1 and plantaricin IIA-2B2.

  6. Development and reproduction of ‘B' biotype Bemisia tabaci (Gennadius) (Homoptera: Aleyrodidae) on four ornamentals

    Institute of Scientific and Technical Information of China (English)

    LILIN; SHUN-XIANGREN

    2005-01-01

    Effects of four commercial ornamentals on the development, survivorship and reproduction of the whitefly B biotype Bemisia tabaci (Gennadius) were studied in the laboratory (temperature 26 ±1℃; relative humidity 75%-90%; L: D 14:10). The total survivorship from egg to adult on hibiscus (Hibiscus rosa-sinensis L.), poinsettia (Euphorbia pulcherrima Will), cottonrose hibiscus (Hibiscus mutabilis L.) and variegated leafcroton (Codiaeum variegatum ‘Aucubaefolium') were 33.69%, 40.55%, 79.11%, and 29.39%,respectively. The developmental periods from egg to adult varied from 23.12 days on cottonrose hibiscus to 32.13 days on hibiscus. The average longevity of adult females ranged from 6.87 days on variegated leafcroton to 21.07 days on poinsettia. The average numbers of eggs laid per female were 9.20, 25.13, 54.45, and 26.79 on the above respective hosts. The intrinsic rates of natural increase (rm) for B biotype B. tabaci on cottonrose hibiscus was the highest. Based on life table analyses of whitefly populations, cottonrose hibiscus was the most suitable host for B biotype B. tabaci in this study.

  7. Phospholipase, proteinase and haemolytic activities of Candida albicans isolated from oral cavities of patients with type 2 diabetes mellitus.

    Science.gov (United States)

    Tsang, C S P; Chu, F C S; Leung, W K; Jin, L J; Samaranayake, L P; Siu, S C

    2007-10-01

    The aim of this study was to biotype and characterize phospholipase, proteinase and haemolytic activities of oral Candida albicans isolates from 210 Chinese patients with type 2 diabetes mellitus (DM) and 210 age- and sex-matched healthy controls. Seventy-six and 50 C. albicans isolates were obtained from type 2 DM patients and controls, respectively, using the oral rinse technique. The isolates were characterized with a biotyping system based on enzyme profiles, carbohydrate assimilation patterns and boric acid resistance of the yeasts, and the isolates were further tested for in vitro phospholipase, proteinase and haemolytic activities. The major biotypes of C. albicans isolates from the type 2 DM and control groups were A1R (42.1 %) and J1R (36.0 %), respectively. Significantly higher proteinase and haemolytic activities were found in the isolates from the type 2 DM group (P or =10 years of DM history than those with DM patients than in those from male counterparts (PCandida isolates taken from DM patients.

  8. The Lake Chad Basin, an Isolated and Persistent Reservoir of Vibrio cholerae O1: A Genomic Insight into the Outbreak in Cameroon, 2010.

    Science.gov (United States)

    Kaas, Rolf S; Ngandjio, Antoinette; Nzouankeu, Ariane; Siriphap, Achiraya; Fonkoua, Marie-Christine; Aarestrup, Frank M; Hendriksen, Rene S

    2016-01-01

    The prevalence of reported cholera was relatively low around the Lake Chad basin until 1991. Since then, cholera outbreaks have been reported every couple of years. The objective of this study was to investigate the 2010/2011 Vibrio cholerae outbreak in Cameroon to gain insight into the genomic make-up of the V. cholerae strains responsible for the outbreak. Twenty-four strains were isolated and whole genome sequenced. Known virulence genes, resistance genes and integrating conjugative element (ICE) elements were identified and annotated. A global phylogeny (378 genomes) was inferred using a single nucleotide polymorphism (SNP) analysis. The Cameroon outbreak was found to be clonal and clustered distant from the other African strains. In addition, a subset of the strains contained a deletion that was found in the ICE element causing less resistance. These results suggest that V. cholerae is endemic in the Lake Chad basin and different from other African strains. PMID:27191718

  9. The Lake Chad Basin, an Isolated and Persistent Reservoir of Vibrio cholerae O1: A Genomic Insight into the Outbreak in Cameroon, 2010

    Science.gov (United States)

    Kaas, Rolf S.; Ngandjio, Antoinette; Nzouankeu, Ariane; Siriphap, Achiraya; Fonkoua, Marie-Christine; Aarestrup, Frank M.; Hendriksen, Rene S.

    2016-01-01

    The prevalence of reported cholera was relatively low around the Lake Chad basin until 1991. Since then, cholera outbreaks have been reported every couple of years. The objective of this study was to investigate the 2010/2011 Vibrio cholerae outbreak in Cameroon to gain insight into the genomic make-up of the V. cholerae strains responsible for the outbreak. Twenty-four strains were isolated and whole genome sequenced. Known virulence genes, resistance genes and integrating conjugative element (ICE) elements were identified and annotated. A global phylogeny (378 genomes) was inferred using a single nucleotide polymorphism (SNP) analysis. The Cameroon outbreak was found to be clonal and clustered distant from the other African strains. In addition, a subset of the strains contained a deletion that was found in the ICE element causing less resistance. These results suggest that V. cholerae is endemic in the Lake Chad basin and different from other African strains. PMID:27191718

  10. Isolation and Characterization of GmSTY1, a Novel Gene Encoding a Dual-Specificity Protein Kinase in Soybean (Glycine max L.)

    Institute of Scientific and Technical Information of China (English)

    2006-01-01

    Phosphorylation of protein kinases has profound effects on their activity and interaction with other proteins.Tyrosine phosphorylation was reported to be involved in various physiological processes in plants; however,no typical receptor tyrosine kinase has been isolated from plants thus far. Dual-specificity kinases are potentially responsible for the phosphorylation of both tyrosine and serine/threonine of target proteins. A cDNA clone encoding a putative dual-specificity protein kinase was isolated by screening the cDNA GAL4 activation domain (AD) fusion library of soybean (Glycine max L.), and its entire length was obtained using 5'-rapid amplification of cDNA ends. The predicted polypeptide of 330 amino acid residues, designated as GmSTY1, contains all 11 conserved subdomains, which share common characteristics with both the serine/threonine and tyrosine protein kinases reported thus far. In addition, three potential N-linked glycosylation sites (NXS/T), as well as phosphorylation motifs (SXXXS/T), were observed, suggesting that GmSTY1 may be post-translationally modified. Furthermore, a potential N-myristoylation motif (MGARCSK) was found,suggesting that the GmSTY1 protein could associate with membranes In vivo. Southern blotting analysis revealed a single-copy of GmSTY1 in the genome. Northern blotting analysis showed that this gene was upregulated by drought and salt treatment in a time-dependent manner; however, exogenous abscisic acid (ABA) could not significantly affect the mRNA accumulation of GmSTY1. Interestingly, the transcript of this gene was remarkably downregulated by cold treatment during the early stages of the response, but upregulated later. These results indicate that the protein kinase was possibly regulated by abiotlc stresses in an ABA-independent pathway.

  11. Heterogeneity among isolates of Vibrio vulnificus recovered from eels ( Anguilla anguilla ) in Denmark

    DEFF Research Database (Denmark)

    Høi, L.; Dalsgaard, Inger; DePaola, A.;

    1998-01-01

    The findings of this study demonstrate that Vibrio vulnificus isolates recovered from diseased eels in Denmark are heterogeneous as shown by O serovars, capsule types, ribotyping, phage typing, and plasmid profiling, The study: includes 85 V. vulnificus isolates isolated from the gills, intestina...... to be associated with eel virulence, The subdivision of V. vulnificus into two biotypes based on the indole reaction can no longer be supported, since 82 of 97 isolates in this study mere indole positive, and a subdivision into serovars appears to he more correct....

  12. Genetic and biochemical diversity of Gardnerella vaginalis strains isolated from women with bacterial vaginosis.

    Science.gov (United States)

    Pleckaityte, Milda; Janulaitiene, Migle; Lasickiene, Rita; Zvirbliene, Aurelija

    2012-06-01

    Gardnerella vaginalis is considered a substantial player in the progression of bacterial vaginosis (BV). We analysed 17 G. vaginalis strains isolated from the genital tract of women diagnosed with BV to establish a potential link between genotypes/biotypes and the expression of virulence factors, vaginolysin (VLY) and sialidase, which are assumed to play a substantial role in the pathogenesis of BV. Amplified ribosomal DNA restriction analysis revealed two G. vaginalis genotypes. Gardnerella vaginalis isolates of genotype 2 appeared more complex than genotype 1 and were subdivided into three subtypes. Biochemical typing allowed us to distinguish four different biotypes. A great diversity of the level of VLY production among the isolates of G. vaginalis may be related to a different cytotoxicity level of the strains. We did not find any correlation between VLY production level and G. vaginalis genotype/biotype. In contrast, a link between G. vaginalis genotype and sialidase production was established. Our findings on the diversity of VLY expression level in different clinical isolates and linking sialidase activity with the genotype of G. vaginalis could help to evaluate the pathogenic potential of different G. vaginalis strains.

  13. EPSPS variability, gene expression, and enzymatic activity in glyphosate-resistant biotypes of Digitaria insularis.

    Science.gov (United States)

    Galeano, E; Barroso, A A M; Vasconcelos, T S; López-Rubio, A; Albrecht, A J P; Victoria Filho, R; Carrer, H

    2016-08-12

    Weed resistance to herbicides is a natural phenomenon that exerts selection on individuals in a population. In Brazil, glyphosate resistance was recently detected in Digitaria insularis. The objective of this study was to elucidate mechanisms of weed resistance in this plant, including genetic variability, allelism, amino acid substitutions, gene expression, and enzymatic activity levels. Most of these have not previously been studied in this species. D. insularis DNA sequences were used to analyze genetic variability. cDNA from resistant and susceptible plants was used to identify mutations, alleles, and 5-enolpyruvylshikimate-3-phosphate synthase (EPSPS) expression, using real-time quantitative reverse transcription-polymerase chain reaction. In addition, EPSPS activity was measured. We found a decrease in genetic variability between populations related to glyphosate application. Substitutions from proline to threonine and tyrosine to cysteine led to a decrease in EPSPS affinity for the glyphosate. In addition, the EPSPS enzymatic activity was slightly higher in resistant plants, whereas EPSPS gene expression was almost identical in both biotypes, suggesting feedback regulation at different levels. To conclude, our results suggest new molecular mechanisms used by D. insularis to increase glyphosate resistance.

  14. EPSPS variability, gene expression, and enzymatic activity in glyphosate-resistant biotypes of Digitaria insularis.

    Science.gov (United States)

    Galeano, E; Barroso, A A M; Vasconcelos, T S; López-Rubio, A; Albrecht, A J P; Victoria Filho, R; Carrer, H

    2016-01-01

    Weed resistance to herbicides is a natural phenomenon that exerts selection on individuals in a population. In Brazil, glyphosate resistance was recently detected in Digitaria insularis. The objective of this study was to elucidate mechanisms of weed resistance in this plant, including genetic variability, allelism, amino acid substitutions, gene expression, and enzymatic activity levels. Most of these have not previously been studied in this species. D. insularis DNA sequences were used to analyze genetic variability. cDNA from resistant and susceptible plants was used to identify mutations, alleles, and 5-enolpyruvylshikimate-3-phosphate synthase (EPSPS) expression, using real-time quantitative reverse transcription-polymerase chain reaction. In addition, EPSPS activity was measured. We found a decrease in genetic variability between populations related to glyphosate application. Substitutions from proline to threonine and tyrosine to cysteine led to a decrease in EPSPS affinity for the glyphosate. In addition, the EPSPS enzymatic activity was slightly higher in resistant plants, whereas EPSPS gene expression was almost identical in both biotypes, suggesting feedback regulation at different levels. To conclude, our results suggest new molecular mechanisms used by D. insularis to increase glyphosate resistance. PMID:27525929

  15. Development of Bemisia tabaci (Gennadius,1889 biotype B on Lycopersicon spp. genotypes

    Directory of Open Access Journals (Sweden)

    Marilene Fancelli

    2002-01-01

    Full Text Available Whiteflies are phytophagous insects, whose nymphs and adults suck the phloem sap, causing direct damage due to host plant weakness. In tomato (Lycopersicon spp. crops, they are important vectors of limiting fitoviruses. The objective of this study was to determine the effects of Lycopersicon spp. genotypes on Bemisia tabaci (Gennadius, 1889 biotype B development under greenhouse conditions. The evaluated genotypes were LA462 (L. peruvianum, LA716 (L. pennellii, LA1584 (L. pimpinellifolium, LA1609 (L. peruvianum, LA1739 (L. hirsutum, P25 (L. esculentum, PI134417 (L. hirsutum f. glabratum and Santa Clara (L. esculentum. LA716 was non-preferred for oviposition by the whitefly, which suggests an antixenotic effect. LA1584 showed an antibiotic resistance because nymphal survival was reduced and nymphal developmental time was increased. Antixenotic resistance was observed in LA1739 and PI134417, based on a reduction of oviposition. PI134417 also reduced nymphal survival, which suggests an antibiotic effect, but LA1739 was suitable for insect development. LA1609 was highly preferred for oviposition, however it reduced insect survival. P25 and Santa Clara (L. esculentum were highly preferred for oviposition.

  16. Gamma sensitivity in intergeneric conjugants of vibrio cholerae biotype proteus x serratia marcescens

    Energy Technology Data Exchange (ETDEWEB)

    Sokurova, E.N.; Golovina, V.S.

    Results are presented from experiments to study gamma sensitivity in 33 clones of intergeneric conjugants, with complete survivability curves, and 64 clones with determination of radiosensitivity and survival following a single dose or radiation. Bacterial cultures of Vibrio cholerae biotype Proteus and Serratia marcescens were studied after gamma irradiation at a dose rate of 0.103 Gy/sec. Survivability was determined from the ability of cells to form colonies. The 33 intergeneric conjugants were found to fall into one of four different categories in terms of radiosensitivity: those similar to the donor cells (2 clones), those having radioresistance intermediate between donor and recipient (2 clones), those identical with the recipient cells (18 clones), and those characterized by radioresistance somewhat greater than the recipient (11 clones). Thus, most conjugants were either the same as the recipient cells or slightly more radioresistant to gamma radiation. Another group (64 clones) irradiated with a dose of 115 Gy displayed basically the same spread of radiosensitivity. The findings in the main agree with earlier studies indicating that acquisition of plasmid factors by bacterial cells leads to enhanced UV-resistance and resistance to ionizing radiation. 12 references.

  17. 上海地区烟粉虱生物型的鉴定%The Identification of Biotypes of Bemisia tabaci in Shanghai Area

    Institute of Scientific and Technical Information of China (English)

    史苹香; 王冬生; 滕海媛; 章巧利; 张天澍; 袁永达; 王建国

    2012-01-01

    烟粉虱是一种由许多生物型组成的复合种,是一种世界性的重要害虫.不同生物型的烟粉虱在寄主范围、传毒能力、抗药性等许多生物学特性方面存在差异.利用mtDNA COI基因作标记对上海地区的烟粉虱生物型进行了分析鉴定.结果表明,所测上海10个代表性地区中,闵行区只检测到B型烟粉虱,嘉定、青浦和徐汇区只检测到Q型烟粉虱,其余各地区B型和Q型两种生物型烟粉虱共存.所测上海地区共45个种群中,有31个种群为Q型,占所测种群的68.9%,14个种群为R型,占31.1%.而且,大棚采集种群多为Q型(Q型占87.0%).结果说明Q型烟粉虱已在上海地区广泛存在、大量发生,并有取代R型烟粉虱成为上海地区烟粉虱主要危害类型的可能.%The Bemisia tabaci (Cennadius) species complex is one of the most devastating agricultural pests in the world, which is composed of numerous bieiypes. These biotypes show different biological traits with respect to host range,virus -transmission capabilities and insecticide resistance. In this study, the 45 Bemisia tabaci populations from 10 different regions of Shanghai were collected and analyzed based on the gene sequence of Mitochondrial cytochrome oxidase 1 ( mtDNA COI). The results show that the populations from Jiading, Jinshan and Xuhui districts were only Q biotype, and only B biotypes was found in Minhang district, but B and Q biotypes co - exist in other districts. Moreover, among the total 45 populations of Bemisia tabaci i-dentified in this study, 31 populations were Q biotype, 68. 9% proportion and B biotype 31. 1% respectively. In addition, most populations collected from greenhouse were Q biotype(87. 0% ). The results indicated that Q biotype spreads widely in Shanghai area and may replace the B biotype as a major crop pest in Shanghai area.

  18. Bacteremia with Streptococcus bovis and Streptococcus salivarius: clinical correlates of more accurate identification of isolates.

    Science.gov (United States)

    Ruoff, K L; Miller, S I; Garner, C V; Ferraro, M J; Calderwood, S B

    1989-01-01

    Two biotypes of Streptococcus bovis can be identified by laboratory testing and can be distinguished from the phenotypically similar organism Streptococcus salivarius. We assessed the clinical relevance of careful identification of these organisms in 68 patients with streptococcal bacteremia caused by these similar species. S. bovis was more likely to be clinically significant when isolated from blood (89%) than was S. salivarius (23%). There was a striking association between S. bovis I bacteremia and underlying endocarditis (94%) compared with that of S. bovis II bacteremia (18%). Bacteremia with S. bovis I was also highly correlated with an underlying colonic neoplasm (71% of patients overall, 100% of those with thorough colonic examinations) compared with bacteremia due to S. bovis II or S. salivarius (17% overall, 25% of patients with thorough colonic examinations). We conclude that careful identification of streptococcal bacteremic isolates as S. bovis biotype I provides clinically important information and should be more widely applied. PMID:2915024

  19. Study on Drugs Susceptibility, tetM Gene Determination and Biotypes of Ureaplasma Urealyticum%解脲支原体药敏与tetM基因检测及生物群的研究

    Institute of Scientific and Technical Information of China (English)

    张艳; 吴移谋; 余敏君; 尹卫国

    2001-01-01

    目的 了解泌尿生殖道支原体的耐药性机理,指导临床治疗。方法 采用微量肉汤稀释法测定281株UU对5种抗菌药物的最低抑菌浓度(MIC),用PCR法扩增tetM基因并酶切,用UU MB抗原基因引物对tetM基因阳性UU株进行生物群的研究。结果 281株UU中82株对四环素MIC为16~256μg/ml,39株为8μg/ml,7株为4μg/ml,153株MIC<4μg/ml;121株MIC≥8μg/ml及2株MIC=4μg/ml者均出现377bp tetM基因阳性带;阳性检测率为43.77%。158株UU MIC≤4μg/ml未见类似扩增带。扩增产物用HpaⅡ酶切和电泳分析,均产生279bp和98bp两个特异性片段。281株UU用群特异性PCR分析,生物群1有166株,生物群2有115株;123株tetM阳性UU株,属生物群1、2者分别有54株和69株,分别占32.53%(54/166)和60.0%(69/115)(x2=7.94,P<0.05)。结论 ①PCR技术检测泌尿生殖道感染患者UU耐药性tetM基因具有特异、敏感、快速等优点;②载有tetM基因的UU株可能成为四环素耐药株,应进行监测及随访;③我国衡阳地区UU四环素耐药株以生物群2占优势。%Objective To monitor resistance of urogenital mycoplasma periodically, and to instruct rational application of antibiotics clinically. Methods The minimal inhibitory concentrations(MICs) of 281 strains UU to 5 kinds of antimicrobial a gents were determined using microbroth dilution assay, the tetM gene in the isolates was detected by PCR and the PCR products were digested by Hpa Ⅱ restrictive endonuclease. PCR analysis was used to sutdy the biotypes of UU with tetM gene with primers derived from MB antigen gene. Results Of 281 strains UU tested,82 strains,which MIC were≥16~256μg/ml,39 MIC=8μg/ ml,7MIC= 4μg/ml and 153,MIC<4μg/ml. A 377bp PCR amplified product was found in 121 strains UU which MIC≥8μg/ ml,2 strains, MIC=4μg/ml also gave PCR products of the appropriate size. The positive rate of tetM was 43.77%. 158 strains MIC≤4μg/ml failed

  20. Isolation and molecular characterization of type I and type II feline coronavirus in Malaysia

    OpenAIRE

    Amer Alazawy; Siti Suri Arshad; Abdul Rahman Omar; Mohd Hair Bejo; Faruku Bande; Saeed Sharif; Tengku Azmi Tengku Ibrahim

    2012-01-01

    Abstract Background Feline infectious peritonitis virus (FIPV) and feline enteric coronavirus (FECV) are two important coronaviruses of domestic cat worldwide. Although FCoV is prevalent among cats; the fastidious nature of type I FCoV to grow on cell culture has limited further studies on tissue tropism and pathogenesis of FCoV. While several studies reported serological evidence for FCoV in Malaysia, neither the circulating FCoV isolated nor its biotypes determined. This study for the first...

  1. Characterization of Vibrio cholerae Strains Isolated from the Nigerian Cholera Outbreak in 2010.

    Science.gov (United States)

    Dupke, Susann; Akinsinde, Kehinde A; Grunow, Roland; Iwalokun, Bamidele A; Olukoya, Daniel K; Oluwadun, Afolabi; Velavan, Thirumalaisamy P; Jacob, Daniela

    2016-10-01

    We examined clinical samples from Nigerian patients with acute watery diarrhea for Vibrio cholerae during the 2010 cholera outbreak. A total of 109 suspected isolates were characterized, but only 57 V. cholerae strains could be confirmed using multiplex real-time PCR as well as rpoB sequencing and typed as V. cholerae O:1 Ogawa biotype El Tor. This finding highlighted the need for accurate diagnosis of cholera in epidemic countries to implement life-saving interventions. PMID:27487957

  2. Identification of Two Soybean Aphid Biotypes%两个大豆蚜虫生物型的初步划分

    Institute of Scientific and Technical Information of China (English)

    肖亮; 王彪; 武天龙

    2013-01-01

    Soybean aphid (Aphis glycines Matsmura)is a major pest of soybean (Glycine max).The responses of seven soybean resources to two aphid isolates from Shanghai and Jilin were compared in this study.In choice and no-choice tests,P203,P746 and P574 showed resistance to both of the two aphids.No significant differences in the average number of aphids were observed between Dowling,Jackson and P203,P746,P574 21 days after infected with Shanghai aphid.However,the average number of aphids on plants of the two genotypes were more than three hundred 21 days after infected with Jilin aphid.The results indicated that the biotype of Shanghai aphid was distinct from that of Jilin aphid.%大豆蚜虫(Aphis glycines Matsumura)是危害大豆(Glycine max)的主要害虫之一.本研究比较了7份大豆资源对我国吉林蚜虫和上海蚜虫的反应.在选择性试验和非选择性试验中,P203、P746、P574等资源对两地蚜虫表现抗性.两个试验中,Dowling和Jackson接种上海蚜虫21d后蚜虫平均数量与P203、P746、P574等无显著性差异;但是,接种吉林蚜虫21d后蚜虫平均数量均在300头以上,表现为感蚜虫.以上结果表明上海蚜虫和吉林蚜虫属于不同的生物型.

  3. Herbicidas alternativos para controle de biótipos de Conyza bonariensis e C. canadensis resistentes ao glyphosate Alternative herbicides to control glyphosate-resistant biotypes of Conyza bonariensis and C. canadensis

    Directory of Open Access Journals (Sweden)

    M.S. Moreira

    2010-01-01

    stages. Three trials were developed under field conditions: in citrus orchards under formation, in plants with phenological stages of ten leaves and at pre-flowering. For plants at the ten leaf stage, satisfactory control was reached with applications of glyphosate + bromacil + diuron (1,440 + 1,200 + 1,200 g ha-1, glyphosate + atrazine (1,440 + 1,500 g ha-1 and glyphosate + diuron (1,440 + 1,500 g ha-1. For Conyza spp. plants at the pre-flowering stage, ammonium-glufosinate application, at the rate of 400 g ha-1, isolated or associated to MSMA, bromacil+diuron, metsulfuron, carfentrazone and paraquat, was a viable alternative to control glyphosate-resistant biotypes.

  4. First report and differential colonization of Passiflora species by the B biotype of Bemisia tabaci (Gennadius) (Hemiptera: Aleyrodidae) in Brazil

    Energy Technology Data Exchange (ETDEWEB)

    Nunes, Endson S.; Vieira, Maria L.C. [Escola Superior de Agricultura Luiz de Queiroz (ESALQ-USP), Piracicaba, SP (Brazil). Dept. de Genetica]. E-mail: esnunes@carpa.ciagri.usp.br; mlcvieir@esalq.usp.br; Brown, Judith K. [University of Arizona, Tucson, AZ (United States). Dept. of Plant Sciences]. E-mail: jbrown@Ag.arizona.edu; Moreira, Adriana G.; Rezende, Jorge A.M. [Escola Superior de Agricultura Luiz de Queiroz (ESALQ-USP), Piracicaba, SP (Brazil). Dept. de Entomologia, Fitopatologia e Zoologia Agricola]. E-mails: agmoreir@esalq.usp.br; amrezen@esalq.usp.br; Watson, Gillian [California Dept. of Food and Agriculture, Sacramento, CA (United States)]. E-mail: gwatson@cdfa.ca.gov; Lourencao, Andre L. [Instituto Agronomico, Campinas, SP (Brazil). Centro de Pesquisa e Desenvolvimento de Fitossanidade]. E-mail: andre@iac.sp.gov.br; Piedade, Sonia M.S. [Escola Superior de Agricultura Luiz de Queiroz (ESALQ-USP), Piracicaba, SP (Brazil). Dept. de Ciencias Exatas]. E-mail: jsoniamsp@esalq.usp.br

    2008-11-15

    This note is the first report of Bemisia tabaci (Gennadius) biotype B colonizing passionvine in Brazil. We examined the colonization of nine Passiflora species by a wild B type population under greenhouse conditions. P. amethystina Mikan was the most preferred species for oviposition and colonization, whereas P. suberosa L., P. coriacea Juss. and two commercially cultivated species, P. alata Curtis and P. edulis Sims f. flavicarpa Degener, were mostly uncolonised. P. morifolia Mast., P. cincinnata Mast., P. foetida L. and P. caerulea L. showed intermediate levels of colonization. Such differential colonization might suggest some degree of resistance by certain Passiflora species or oviposition preference by B. tabaci. (author)

  5. Occurrence of Eretmocerus mundus Mercet (Hymenoptera: Aphelinidae parasitizing Bemisia tabaci (Genn. biotype B (Hemiptera: Aleyrodidae in Brazil

    Directory of Open Access Journals (Sweden)

    André Luiz Lourenção

    2014-06-01

    Full Text Available The parasitism of Bemisia tabaci (Genn. biotype B nymphs on cotton plants was observed during a research on resistance of cotton genotypes to this whitefly. The experiment was set in a greenhouse at the Experimental Station of the Instituto Agronômico (IAC, in Campinas, São Paulo State, Brazil. Samples of the parasitized nymphs were collected and maintained in laboratory to monitor the parasitism and obtain the adult parasitoids. A total of 129 adult parasitoids were obtained, including one Encarsia inaron (Walker, 13 En. lutea (Masi, and 115 Eretmocerus mundus Mercet (Hymenoptera: Aphelinidae. This is the first report of Er. mundus in Brazil.

  6. Biotipagem e resistotipagem para o traçado epidemiológico da origem fecal de Klebsiella pneumoniae em infecções urinárias Biotyping and resistotyping for epidemiological tracing of the fecal origin of Klebsiella pneumoniae in urinary infections

    Directory of Open Access Journals (Sweden)

    José Augusto Adler Pereira

    1985-09-01

    there correlation with simultaneous biotyping identity. Simultaneous occurrence of identical biotypes or resistotypes in faeces and urine occurred in only 54.2% of cases. However, there was a significant association between resistance ot mercuric and tellurite ions in fecal and urinary strains isolated from the same patient (p<0.001.

  7. Management Options and Factors Affecting Control of a Common Waterhemp (Amaranthus rudis Biotype Resistant to Protoporphyrinogen Oxidase-Inhibiting Herbicides

    Directory of Open Access Journals (Sweden)

    Dana B. Harder

    2012-01-01

    Full Text Available Repeated use of protox-inhibiting herbicides has resulted in a common waterhemp (Amaranthus rudis Sauer biotype that survived lactofen applied up to 10 times the labeled rate. Field and greenhouse research evaluated control options for this biotype of common waterhemp. In the field, PRE applications of flumioxazin at 72 g ai ha−1, sulfentrazone at 240 g ai ha−1, and isoxaflutole at 70 g ai ha−1 controlled common waterhemp >90% up to 6 weeks after treatment. POST applications of fomesafen at 330 g ai ha−1, lactofen at 220 g ai ha−1, and acifluorfen at 420 g ai ha−1 resulted in <60% visual control of common waterhemp, but differences were detected among herbicides. In the greenhouse, glyphosate was the only herbicide that controlled protox resistant waterhemp. The majority of herbicide activity from POST flumioxazin, fomesafen, acifluorfen, and lactofen was from foliar placement, but control was less than 40% regardless of placement. Control of common waterhemp seeded at weekly intervals after herbicide treatment with flumioxazin, fomesafen, sulfentrazone, atrazine, and isoxaflutole exceeded 85% at 0 weeks after herbicide application (WAHA, while control with isoxaflutole was greater than 60% 6 WAHA. PRE and POST options for protox-resistant common waterhemp are available to manage herbicide resistance.

  8. [Effects of calcium fertilizer on the development, survival, and feeding of B-biotype Bemisia tabaci on Euphorbia pulcherrima].

    Science.gov (United States)

    Huang, Jun; Zhang, Juan; Yu, Yong-Ming; Liu, Jian-Xin; Li, Ming-Jiang; Zhu, Kai-Yuan

    2012-09-01

    This paper studied the development, survival, and feeding of B-biotype Bemisia tabaci on Euphorbia pulcherrima under the conditions of 26 +/- 1 degrees C and 60% - 80% relative humidity after applying calcium fertilizer, taking applying fresh water as the control. There existed significant differences in the developmental duration of B. tabaci between treatment applying calcium fertilizer and the control. After applying calcium fertilizer, the egg stage of B. tabaci shortened significantly, and the development from egg to adult took 20.18 days (for the control, it took 18.72 days). However, there were no significant differences in the survival rates of B. tabaci at different development stages between the two treatments. The feeding of B. tabaci on E. pulcherrima induced the plant leaf chlorophyll fluorescence parameters changed, i. e., the photochemical efficiency (Fv/Fm), photochemical quenching coefficient (q(p)), light use efficiency (alpha), maximum photosynthesis rate (rETRmax), and tolerance to light (I(k)) decreased significantly, while the non-photochemical quenching coefficient (NPQ) had a significant increase. After applying calcium fertilizer, the plant leaf photoinhibition parameter (beta), rETRmax, and I(k) had less difference with th e control. The nail polish blot observation on the lower epidermis structure of plant leaf showed that calcium fertilizer could effectively compensate the decrease in the photosynthesis of E. pulcherrima damaged by B-biotype B. tabaci.

  9. Glyphosate effects on gas exchange and chlorophyll fluorescence responses of two Lolium perenne L. biotypes with differential herbicide sensitivity.

    Science.gov (United States)

    Yanniccari, Marcos; Tambussi, Eduardo; Istilart, Carolina; Castro, Ana María

    2012-08-01

    Despite the extensive use of glyphosate, how it alters the physiology and metabolism of plants is still unclear. Photosynthesis is not regarded to be a primary inhibitory target of glyphosate, but it has been reported to be affected by this herbicide. The aim of the current research was to determine the effects of glyphosate on the light and dark reactions of photosynthesis by comparing glyphosate-susceptible and glyphosate-resistant Lolium perenne biotypes. After glyphosate treatment, accumulation of reduced carbohydrates occurred before a decrease in gas exchange. Stomatal conductance and CO(2) assimilation were reduced earlier than chlorophyll fluorescence and the amount of chlorophyll in susceptible plants. In the glyphosate-resistant biotype, stomatal conductance was the only parameter slightly affected only 5 days post-application. In susceptible plants, the initial glyphosate effects on gas exchange could be a response to a feedback regulation of photosynthesis. Since the herbicide affects actively growing tissues regardless of the inhibition of photosynthesis, the demand of assimilates decreased and consequently induced an accumulation of carbohydrates in leaves. We concluded that stomatal conductance could be a very sensitive parameter to assess both the susceptibility/resistance to glyphosate before the phytotoxic symptoms become evident.

  10. Biotype Characterization, Developmental Profiling, Insecticide Response and Binding Property of Bemisia tabaci Chemosensory Proteins: Role of CSP in Insect Defense

    Science.gov (United States)

    Liu, Guoxia; Ma, Hongmei; Xie, Hongyan; Xuan, Ning; Guo, Xia; Fan, Zhongxue; Rajashekar, Balaji; Arnaud, Philippe; Offmann, Bernard; Picimbon, Jean-François

    2016-01-01

    Chemosensory proteins (CSPs) are believed to play a key role in the chemosensory process in insects. Sequencing genomic DNA and RNA encoding CSP1, CSP2 and CSP3 in the sweet potato whitefly Bemisia tabaci showed strong variation between B and Q biotypes. Analyzing CSP-RNA levels showed not only biotype, but also age and developmental stage-specific expression. Interestingly, applying neonicotinoid thiamethoxam insecticide using twenty-five different dose/time treatments in B and Q young adults showed that Bemisia CSP1, CSP2 and CSP3 were also differentially regulated over insecticide exposure. In our study one of the adult-specific gene (CSP1) was shown to be significantly up-regulated by the insecticide in Q, the most highly resistant form of B. tabaci. Correlatively, competitive binding assays using tryptophan fluorescence spectroscopy and molecular docking demonstrated that CSP1 protein preferentially bound to linoleic acid, while CSP2 and CSP3 proteins rather associated to another completely different type of chemical, i.e. α-pentyl-cinnamaldehyde (jasminaldehyde). This might indicate that some CSPs in whiteflies are crucial to facilitate the transport of fatty acids thus regulating some metabolic pathways of the insect immune response, while some others are tuned to much more volatile chemicals known not only for their pleasant odor scent, but also for their potent toxic insecticide activity. PMID:27167733

  11. Biotype Characterization, Developmental Profiling, Insecticide Response and Binding Property of Bemisia tabaci Chemosensory Proteins: Role of CSP in Insect Defense.

    Science.gov (United States)

    Liu, Guoxia; Ma, Hongmei; Xie, Hongyan; Xuan, Ning; Guo, Xia; Fan, Zhongxue; Rajashekar, Balaji; Arnaud, Philippe; Offmann, Bernard; Picimbon, Jean-François

    2016-01-01

    Chemosensory proteins (CSPs) are believed to play a key role in the chemosensory process in insects. Sequencing genomic DNA and RNA encoding CSP1, CSP2 and CSP3 in the sweet potato whitefly Bemisia tabaci showed strong variation between B and Q biotypes. Analyzing CSP-RNA levels showed not only biotype, but also age and developmental stage-specific expression. Interestingly, applying neonicotinoid thiamethoxam insecticide using twenty-five different dose/time treatments in B and Q young adults showed that Bemisia CSP1, CSP2 and CSP3 were also differentially regulated over insecticide exposure. In our study one of the adult-specific gene (CSP1) was shown to be significantly up-regulated by the insecticide in Q, the most highly resistant form of B. tabaci. Correlatively, competitive binding assays using tryptophan fluorescence spectroscopy and molecular docking demonstrated that CSP1 protein preferentially bound to linoleic acid, while CSP2 and CSP3 proteins rather associated to another completely different type of chemical, i.e. α-pentyl-cinnamaldehyde (jasminaldehyde). This might indicate that some CSPs in whiteflies are crucial to facilitate the transport of fatty acids thus regulating some metabolic pathways of the insect immune response, while some others are tuned to much more volatile chemicals known not only for their pleasant odor scent, but also for their potent toxic insecticide activity. PMID:27167733

  12. Biotype Characterization, Developmental Profiling, Insecticide Response and Binding Property of Bemisia tabaci Chemosensory Proteins: Role of CSP in Insect Defense.

    Directory of Open Access Journals (Sweden)

    Guoxia Liu

    Full Text Available Chemosensory proteins (CSPs are believed to play a key role in the chemosensory process in insects. Sequencing genomic DNA and RNA encoding CSP1, CSP2 and CSP3 in the sweet potato whitefly Bemisia tabaci showed strong variation between B and Q biotypes. Analyzing CSP-RNA levels showed not only biotype, but also age and developmental stage-specific expression. Interestingly, applying neonicotinoid thiamethoxam insecticide using twenty-five different dose/time treatments in B and Q young adults showed that Bemisia CSP1, CSP2 and CSP3 were also differentially regulated over insecticide exposure. In our study one of the adult-specific gene (CSP1 was shown to be significantly up-regulated by the insecticide in Q, the most highly resistant form of B. tabaci. Correlatively, competitive binding assays using tryptophan fluorescence spectroscopy and molecular docking demonstrated that CSP1 protein preferentially bound to linoleic acid, while CSP2 and CSP3 proteins rather associated to another completely different type of chemical, i.e. α-pentyl-cinnamaldehyde (jasminaldehyde. This might indicate that some CSPs in whiteflies are crucial to facilitate the transport of fatty acids thus regulating some metabolic pathways of the insect immune response, while some others are tuned to much more volatile chemicals known not only for their pleasant odor scent, but also for their potent toxic insecticide activity.

  13. Vibrio cholerae Serogroup O139: Isolation from Cholera Patients and Asymptomatic Household Family Members in Bangladesh between 2013 and 2014.

    Directory of Open Access Journals (Sweden)

    Fahima Chowdhury

    2015-11-01

    Full Text Available Cholera is endemic in Bangladesh, with outbreaks reported annually. Currently, the majority of epidemic cholera reported globally is El Tor biotype Vibrio cholerae isolates of the serogroup O1. However, in Bangladesh, outbreaks attributed to V. cholerae serogroup O139 isolates, which fall within the same phylogenetic lineage as the O1 serogroup isolates, were seen between 1992 and 1993 and in 2002 to 2005. Since then, V. cholerae serogroup O139 has only been sporadically isolated in Bangladesh and is now rarely isolated elsewhere.Here, we present case histories of four cholera patients infected with V. cholerae serogroup O139 in 2013 and 2014 in Bangladesh. We comprehensively typed these isolates using conventional approaches, as well as by whole genome sequencing. Phenotypic typing and PCR confirmed all four isolates belonging to the O139 serogroup.Whole genome sequencing revealed that three of the isolates were phylogenetically closely related to previously sequenced El Tor biotype, pandemic 7, toxigenic V. cholerae O139 isolates originating from Bangladesh and elsewhere. The fourth isolate was a non-toxigenic V. cholerae that, by conventional approaches, typed as O139 serogroup but was genetically divergent from previously sequenced pandemic 7 V. cholerae lineages belonging to the O139 or O1 serogroups.These results suggest that previously observed lineages of V. cholerae O139 persist in Bangladesh and can cause clinical disease and that a novel disease-causing non-toxigenic O139 isolate also occurs.

  14. Isolation and molecular characterization of type I and type II feline coronavirus in Malaysia

    Directory of Open Access Journals (Sweden)

    Amer Alazawy

    2012-11-01

    Full Text Available Abstract Background Feline infectious peritonitis virus (FIPV and feline enteric coronavirus (FECV are two important coronaviruses of domestic cat worldwide. Although FCoV is prevalent among cats; the fastidious nature of type I FCoV to grow on cell culture has limited further studies on tissue tropism and pathogenesis of FCoV. While several studies reported serological evidence for FCoV in Malaysia, neither the circulating FCoV isolated nor its biotypes determined. This study for the first time, describes the isolation and biotypes determination of type I and type II FCoV from naturally infected cats in Malaysia. Findings Of the total number of cats sampled, 95% (40/42 were RT-PCR positive for FCoV. Inoculation of clinical samples into Crandell feline kidney cells (CrFK, and Feline catus whole fetus-4 cells (Fcwf-4, show cytopathic effect (CPE characterized by syncytial cells formation and later cell detachment. Differentiation of FCoV biotypes using RT-PCR assay revealed that, 97.5% and 2.5% of local isolates were type I and type II FCoV, respectively. These isolates had high sequence homology and phylogenetic similarity with several FCoV isolates from Europe, South East Asia and USA. Conclusions This study reported the successful isolation of local type I and type II FCoV evident with formation of cytopathic effects in two types of cell cultures namely the CrFK and Fcwf-4 , where the later cells being more permissive. However, the RT-PCR assay is more sensitive in detecting the antigen in suspected samples as compared to virus isolation in cell culture. The present study indicated that type I FCoV is more prevalent among cats in Malaysia.

  15. Significance of buccopalatal implant position, biotype, platform switching, and pre-implant bone augmentation on the level of the midbuccal mucosa

    NARCIS (Netherlands)

    Zuiderveld, Elise G; den Hartog, Laurens; Vissink, Arjan; Raghoebar, Gerry M; Meijer, Henny J A

    2014-01-01

    This study assessed whether buccopalatal implant position, biotype, platform switching, and pre-implant bone augmentation affects the level of the midbuccal mucosa (MBM). Ninety patients with a single-tooth implant in the esthetic zone were included. The level of the MBM was measured on photographs

  16. Dimensional Changes in Alveolar Ridge Following Extraction of Teeth in the Maxillary Premolar Area in Subjects with Thick and Thin Gingival Biotypes: A Pilot Study.

    Science.gov (United States)

    Abdelhafez, Reem S; Alhabashneh, Rola; Khader, Yousef; Hijazi, Mohammed; Jarah, Mohammed

    2016-01-01

    This study investigated changes in residual ridge dimensions after tooth extraction among thin and thick gingival biotypes. Fifteen patients who required extraction of maxillary premolars were classified according to gingival biotypes (10 teeth in 9 participants were included in the thick group, and 6 teeth in 6 participants were included in the thin group). Minimally traumatic extractions were carried out using periotomes and rotational movement of teeth. At the time of extraction an osteometer was used to measure the thickness of the labial plate and the bony alveolar ridge at the extraction site by penetrating the tissues until bone was reached 5 mm, 7 mm, and 10 mm below the midpoint of the crest of the facial and palatal gingival margins. Standardized radiographs were taken immediately and after 3 months. The results of this study show minimal differences in dimensional changes following extraction of premolar teeth in thick and thin gingival biotypes. Significantly greater bone loss was detected in both gingival biotypes when the labial plate thickness was less than 1.5 mm, especially in alveolar ridge height.

  17. 上海地区烟粉虱生物型的最新鉴定%The latest identification of Bemisia tabaci biotype in Shanghai area

    Institute of Scientific and Technical Information of China (English)

    王欢; 李凯

    2015-01-01

    以 mtDNA CO Ⅰ序列标记对上海8个区县的烟粉虱进行了生物型鉴定。序列分析显示,所测33个种群165个样本中,仅发现2种烟粉虱单倍型,即 Q 型与 B 型。B 型仅存于远郊崇明的花椰菜种群与奉贤的南瓜种群,比例为6%;其余各种群均为 Q 型,占94%。结果显示:Q 型烟粉虱已全面取代 B 型烟粉虱,成为上海地区主要优势生物型。%The biotypes of Bemisia tabaci from 8 districts of Shanghai suburbs were identified by mtDNA CO Ⅰ sequence marking.The sequence analysis showed that there were only 2 mtDNA haplotypes(Q and B bio-types)found in the 165 individuals of 33 populations.The B biotype was merely living on both broccoli population in Chongming County and pumpkin population in Fengxian District and accounted for 6%;The Q biotype accoun-ted for 94% and became the major biotype of Bemisia tabaci in Shanghai area.

  18. Metabolic profiling and enzyme analyses indicate a potential role of antioxidant systems in complementing glyphosate resistance in an Amaranthus palmeri biotype

    Science.gov (United States)

    Targeted metabolomic profiling and biochemical assays were employed to identify metabolite-level perturbations induced by glyphosate in susceptible (S) and resistant (R) biotypes of Amaranthus palmeri. Plants were treated with 0.4 kg ae ha-1 glyphosate and tissues were harvested at 8 and 72 hours af...

  19. 西藏发现Q型烟粉虱%New record of theBemisia tabaci Q biotype in Tibet, China

    Institute of Scientific and Technical Information of China (English)

    卢少华; 白润娥; 翟卿; 王保海; 闫凤鸣

    2016-01-01

    Objectives]To determine the biotypes ofBemisia tabaci (Gennadius) found in the Tibet Autonomous Region, China. [Methods] Morphological characteristics of whiteflies were observed under a 3D digital microscope, and the biotype of whiteflies collected from Lhasa, Tibet, identified on the basis of variation in the molecular marker mtCOⅠ. [Results] Analysis of variation in themtCOⅠmolecular marker shows that whiteflies collected in Tibet were of the Q biotype. [Conclusion]The results of both morphological identification and molecular analysis show that the whiteflies collected in Lhasa, Tibet Autonomous Region, were of theBemisia tabaci Q biotype. This is the first report of theBemisia tabaci Q biotype from the Tibet Autonomous Region.%【目的】调查西藏自治区烟粉虱Bemisia tabaci(Gennadius)的发生情况。【方法】从西藏拉萨采集到烟粉虱各个虫态,采用3D数码显微镜观察所采集烟粉虱的形态特征,利用 mtCOⅠ分子标记检测烟粉虱的生物型。【结果】明确并详细描述了烟粉虱各形态特征,mtCOⅠ分子标记检测显示西藏采集到的烟粉虱为Q生物型。【结论】在形态学鉴定的基础上,分子生物学鉴定该粉虱为Q型烟粉虱,这是Q型烟粉虱在西藏自治区发生的首次报道。

  20. Purification, characterization, and amino acid sequencing of a. delta. /sup 5/-3-oxosteroid isomerase from Pseudomonas putida biotype B

    Energy Technology Data Exchange (ETDEWEB)

    Linden, K.G.

    1986-01-01

    Studies were performed on the ..delta../sup 5/-3-oxosteroid isomerase from Pseudomonas putida biotype B. The studies have involved three broad areas: improvement in the purification of the enzyme, further characterization of the purified enzyme, and completion of the amino acid sequence of the enzyme. For the purification of the enzyme, techniques for removing the isomerase from whole cells were studied, the effects of ionic strength on the binding of the isomerase to steroidal affinity resins was explored, and a new affinity resin was developed. Absorption spectra and the proton NMR spectra of the isomerase were obtained. Amino acid sequencing of the oxosteroid isomerase indicates that the enzyme is a dimeric protein consisting of two identical subunits each consisting of a polypeptide chain of 131 residues and a M/sub r/ = 14,536.

  1. The antimicrobial activity of ZnO nanoparticles against Vibrio cholerae: Variation in response depends on biotype.

    Science.gov (United States)

    Sarwar, Shamila; Chakraborti, Soumyananda; Bera, Supriyo; Sheikh, Irshad Ali; Hoque, Kazi Mirajul; Chakrabarti, Pinak

    2016-08-01

    The potency of zinc oxide nanoparticles (NPs), with a core size of ~7-10nm, to inhibit cholera disease was investigated by demonstrating the effect on two biotypes (classical and El Tor) of O1 serogroup of Vibrio cholerae-El Tor was more susceptible both in planktonic and in biofilm forms. Interaction with ZnO NP results in deformed cellular architecture. Increased fluidity and depolarization of membrane, and protein leakage further confirmed the damages inflicted on Vibrio by NP. NP was shown to produce reactive oxygen species (ROS) and induce DNA damage. These results suggest that the antibacterial mechanism of ZnO action is most likely due to generation of ROS and disruption of bacterial membrane. The antimicrobial efficacy of NP has been validated in animal model. The synergistic action of NP and antibiotic suggests an alternative for the treatment of cholera. PMID:26970029

  2. High Ozone (O3) Affects the Fitness Associated with the Microbial Composition and Abundance of Q Biotype Bemisia tabaci

    Science.gov (United States)

    Hong, Yanyun; Yi, Tuyong; Tan, Xiaoling; Zhao, Zihua; Ge, Feng

    2016-01-01

    Ozone (O3) affects the fitness of an insect, such as its development, reproduction and protection against fungal pathogens, but the mechanism by which it does so remains unclear. Here, we compared the fitness (i.e., the growth and development time, reproduction and protection against Beauveria bassiana (B. bassiana) of Q biotype whiteflies fumigated under hO3 (280 ± 20 ppb) and control O3 (50 ± 10 ppb) concentrations. Moreover, we determined that gene expression was related to development, reproduction and immunity to B. bassiana and examined the abundance and composition of bacteria and fungi inside of the body and on the surface of the Q biotype whitefly. We observed a significantly enhanced number of eggs that were laid by a female, shortened developmental time, prolonged adult lifespan, decreased weight of one eclosion, and reduced immunity to B. bassiana in whiteflies under hO3, but hO3 did not significantly affect the expression of genes related to development, reproduction and immunity. However, hO3 obviously changed the composition of the bacterial communities inside of the body and on the surface of the whiteflies, significantly reducing Rickettsia and enhancing Candidatus_Cardinium. Similarly, hO3 significantly enhanced Thysanophora penicillioides from the Trichocomaceae family and reduced Dothideomycetes (at the class level) inside of the body. Furthermore, positive correlations were found between the abundance of Candidatus_Cardinium and the female whitefly ratio and the fecundity of a single female, and positive correlations were found between the abundance of Rickettsia and the weight of adult whiteflies just after eclosion and immunity to B. bassiana. We conclude that hO3 enhances whitefly development and reproduction but impairs immunity to B. bassiana, and our results also suggest that the changes to the microbial environments inside of the body and on the surface could be crucial factors that alter whitefly fitness under hO3.

  3. Characterization of Biofilm Formation in [Pasteurella] pneumotropica and [Actinobacillus] muris Isolates of Mouse Origin.

    Science.gov (United States)

    Sager, Martin; Benten, W Peter M; Engelhardt, Eva; Gougoula, Christina; Benga, Laurentiu

    2015-01-01

    [Pasteurella] pneumotropica biotypes Jawetz and Heyl and [Actinobacillus] muris are the most prevalent Pasteurellaceae species isolated from laboratory mouse. However, mechanisms contributing to their high prevalence such as the ability to form biofilms have not been studied yet. In the present investigation we analyze if these bacterial species can produce biofilms in vitro and investigate whether proteins, extracellular DNA and polysaccharides are involved in the biofilm formation and structure by inhibition and dispersal assays using proteinase K, DNase I and sodium periodate. Finally, the capacity of the biofilms to confer resistance to antibiotics is examined. We demonstrate that both [P.] pneumotropica biotypes but not [A.] muris are able to form robust biofilms in vitro, a phenotype which is widely spread among the field isolates. The biofilm inhibition and dispersal assays by proteinase and DNase lead to a strong inhibition in biofilm formation when added at the initiation of the biofilm formation and dispersed pre-formed [P.] pneumotropica biofilms, revealing thus that proteins and extracellular DNA are essential in biofilm formation and structure. Sodium periodate inhibited the bacterial growth when added at the beginning of the biofilm formation assay, making difficult the assessment of the role of β-1,6-linked polysaccharides in the biofilm formation, and had a biofilm stimulating effect when added on pre-established mature biofilms of [P.] pneumotropica biotype Heyl and a majority of [P.] pneumotropica biotype Jawetz strains, suggesting that the presence of β-1,6-linked polysaccharides on the bacterial surface might attenuate the biofilm production. Conversely, no effect or a decrease in the biofilm quantity was observed by biofilm dispersal using sodium periodate on further biotype Jawetz isolates, suggesting that polysaccharides might be incorporated in the biofilm structure. We additionally show that [P.] pneumotropica cells enclosed in biofilms

  4. A STUDY OF ATYPICAL YERSINIA STRAINS ISOLATED FROM MOSELLE RIVER

    Directory of Open Access Journals (Sweden)

    M. Soltan Dallal

    1988-08-01

    Full Text Available Biotypes, serotypes and lysotypes of 38 Yersinia isolated from 48 water samples were studied. These strains belonged to Y.enterocolitica, Y.frederiksenii, Y.kristensenii and Y. intermedia. Except 23.7% of non-serotypable strains, ten different serotypes were isolated of which 0:6 and 0:10 kl were the most frequent. The serotypes 0:3, 0:8, 0:9 responsible for almost all registered cases of yersiniosis in man were not detected. However, a few types 0:5, 0:6, 0:10 kl isolated rarely from specimens (urine of feces of patients were found. These serotypes can be used for correlation with Yersinia and yersiniosis in man.

  5. Identification and Genetic Analysis of Gall Midge Resistance in Rice Germplasm 91-1A2

    Institute of Scientific and Technical Information of China (English)

    LU Jia-shi; HE Long-fei; XU Jing; XU Chun-yan; LI Chuang-zhen; WEI Su-mei; SU Jian-mu

    2013-01-01

    Resistance to rice gall midge in rice germplasm 91-1A2 was identified and genetically analyzed.F1S of rice population were derived from 91-1A2 which crossed with rice materials Jinggui,TN1,W1263 (Gm1),IET2911 (Gm2),BG404-1 (gm3),OB677 (Gm4),ARC5984 (Gm5) and Duokang 1 (Gm6) as a male parent.The resistance of all parental lines and F1,BC1F1 and F2 populations to rice gall midge was identified.The results showed that 91-1A2 and all F1s were resistant to Chinese rice gall midge biotype Ⅳ.The segregation ratio of resistant plants to susceptible ones in BC1F1 and F2 were accorded with 1:3 and 9:7 rules by X2 test,suggesting that the resistance of 91-1A2 to Chinese rice gall midge biotype Ⅳ was controlled by two dominant genes which were new resistance genes,non-allelic to the known rice gall midge resistance genes.

  6. Serological characterization of Actinobacillus pleuropneumoniae biotype 1 strains antigenically related to both serotypes 2 and 7

    DEFF Research Database (Denmark)

    Nielsen, R.; Andresen, Lars Ole; Plambeck, Tamara

    1996-01-01

    ). Immunodiffusion confirmed the antigenic relationship with serotype 2 and further demonstrated an antigenic relationship with strain WF83 (reference strain of serotype 7). SDS-PAGE with LPS from strains 1536, 4226, WF83 and strain 7317 (representative of the 9 isolates examined) showed that strains WF83 and 7317...

  7. Uso da eletroforese de isoenzimas para avaliação da competitividade de biotipos de tiririca Isoenzyme evaluation of intra-specific competitivity of purple nutsedge biotypes

    Directory of Open Access Journals (Sweden)

    Carlos A. R. Silva

    2000-08-01

    Full Text Available O presente trabalho teve o objetivo de avaliar, por meio de eletroforese de isoenzimas, em casa de vegetação, a competitividade dos biotipos de tiririca (Cyperus rotundus L. mais freqüentes que ocorrem no estado de São Paulo. Dos quatorze sistemas enzimáticos testados, seis apresentaram polimorfismo (a e b-EST, ACP, IDH, MDH e SKDH e foram utilizados para a identificação das 66 amostras coletadas, classificando-as em 10 biotipos de Cyperus rotundus. Durante a amostragem, foram identificadas as espécies C. flavus, C. iria e C. esculentus. Foram identificados diferentes biotipos de C. rotundus, com diferentes freqüências de ocorrência no estado de São Paulo. Houve predominância de dois biotipos, que estiveram presentes em 48,5% e 21,2% dos pontos de amostragem. Os diferentes biotipos de C. rotundus mostraram-se distintos em termos de competitividade intra-específica. Os biotipos mais competitivos foram os mais freqüentes nas avaliações de campo.The objective of this research was to evaluate intra-specific competition ability of purple nutsedge Cyperus rotundus biotypes, using isoenzymes. We sampled weed populations in 66 sites all around São Paulo State - Brazil. Polymorphism was observed in six out of fourteen enzymatic systems studied (aand b-EST, ACP, IDH, MDH, and SKDH. Polymorphism was not observed for ADH, CAT, GDH, AAT, LAP, MADH, PER, and SDH. Using the information of the six polymorphic isoenzymes, it was possible to identify 10 biotypes of Cyperus rotundus and C. flavus, C. iria e C. esculentus species. The two major biotypes were predominant in 48.5% and 21.2% of the sampling sites. The competition ability assay was carried out showing that the most widely spread biotypes were the most competitive ones.

  8. Polymorphism of Merozoite Surface Protein-3α Gene of Plasmo-dium vivax in Isolates of Iran

    Directory of Open Access Journals (Sweden)

    M Asmar

    2008-04-01

    Full Text Available Background: The worldwide distribution of P. vivax has expanded significantly and the number of reported cases has been on the rise. Approximately 88% of malaria cases in Iran are caused by Plasmodium vivax, and in order to management of the disease, understanding the population genetic structure of the parasite is necessary for designing and applying drugs and vaccines. Among many potential candidates, merozoite surface protein-3α gene (PvMSP-3α is promising target to develop an effective vaccine. This study was carried out to determine the variation of this gene, as a genetic marker, in Plasmodium vivax isolates in malarious areas of Iran. Methods: Diversity in PvMSP-3α gene was assessed in 85 Plasmodium vivax isolated from four southern and east-southern provinces of the country by PCR/RFLP method. Amplification was performed with two primer pair sets in a nested PCR format and the products were digested by the enzyme HhaI in RFLP method. Results: Based on the size of the PCR products, we observed three biotypes A (about 1900bp, B (about 1400bp and C (about 1100bp of PvMSP-3α gene. Biotype A was predominant. According to RFLP patterns, 10 allelic groups of the gene were observed, that, 7, 2 and 1 groups correspond to the biotype A, B and C, respectively. Mixed genotype and multiple infections were not seen. Conclusion: RFLP method with HhaI enzyme is a useful method for determining the polymorphism of biotype A of PvMSP-3agene.

  9. Characterization of Campylobacter jejuni and Campylobacter coli strains isolated in the region of Niš, Serbia

    Directory of Open Access Journals (Sweden)

    Miljković-Selimović Biljana

    2010-01-01

    Full Text Available Introduction. Campylobacter jejuni and Campylobacter coli represent one of the main causes of bacterial diarrhoea in humans. Although the disease is usually mild and self-limiting, severe chronic sequelae may occur, such as reactive arthritis, Guillain-Barré and Miller Fisher syndromes. Serotyping is used as an epidemiological marker, while post-infective polyneuropathies are associated with several O serotypes. Objective. Strains of C. jejuni and C. coli were serotyped based on heat stable (HS and heat labile (HL antigens, as well as biotypes to determine strain diversity. Methods. Campylobacter spp. was isolated using selective blood media with antibiotics. Differentiation to the species level was done by a combination of biotyping tests and by a PCR-based RFLP test. The isolates were characterised by Penner and Lior serotyping methods. Results. The serotypes showed diversity without predominant serotypes. 24 HS serotypes were detected among 29 C. jejuni strains, and seven serotypes among nine C. coli strains. HL serotyping method successfully typed 62.5% of strains. Among 16 C. jejuni strains 14 serotypes were detected, and three among four C. coli strains. A C. jejuni strain associated with a patient with Guillain-Barré syndrome was typed as biotype II, O:19. Conclusion. The biotyping and serotyping results have indicated that C. jejuni and C. coli strains in the region of Niš, Serbia are diverse and could be probably of unrelated sources of origin or reservoirs. The strain associated with the Guillain-Barré syndrome patient was serotype O:19, one of the most common in this post-infective complication.

  10. Viridans Group Streptococci clinical isolates: MALDI-TOF mass spectrometry versus gene sequence-based identification.

    Directory of Open Access Journals (Sweden)

    Silvia Angeletti

    Full Text Available Viridans Group Streptococci (VGS species-level identification is fundamental for patients management. Matrix-assisted laser desorption ionization-time of flight mass spectrometry (MALDI-TOF MS has been used for VGS identification but discrimination within the Mitis group resulted difficult. In this study, VGS identifications with two MALDI-TOF instruments, the Biotyper (Bruker and the VITEK MS (bioMérieux have been compared to those derived from tuf, soda and rpoB genes sequencing. VGS isolates were clustered and a dendrogram constructed using the Biotyper 3.0 software (Bruker. RpoB gene sequencing resulted the most sensitive and specific molecular method for S. pneumonia identification and was used as reference method. The sensitivity and the specificity of the VITEK MS in S. pneumonia identification were 100%, while the Biotyper resulted less specific (92.4%. In non pneumococcal VGS strains, the group-level correlation between rpoB and the Biotyper was 100%, while the species-level correlation was 61% after database upgrading (than 37% before upgrading. The group-level correlation between rpoB and the VITEK MS was 100%, while the species-level correlation was 36% and increases at 69% if isolates identified as S. mitis/S. oralis are included. The less accurate performance of the VITEK MS in VGS identification within the Mitis group was due to the inability to discriminate between S. mitis and S. oralis. Conversely, the Biotyper, after the release of the upgraded database, was able to discriminate between the two species. In the dendrogram, VGS strains from the same group were grouped into the same cluster and had a good correspondence with the gene-based clustering reported by other authors, thus confirming the validity of the upgraded version of the database. Data from this study demonstrated that MALDI-TOF technique can represent a rapid and cost saving method for VGS identification even within the Mitis group but improvements of spectra

  11. Identification and characterization of RAPD-SCAR markers linked to glyphosate-susceptible and -resistant biotypes of Eleusine indica (L.) Gaertn.

    Science.gov (United States)

    Cha, Thye San; Anne-Marie, Kaben; Chuah, Tse Seng

    2014-02-01

    Eleusine indica is one of the most common weed species found in agricultural land worldwide. Although herbicide-glyphosate provides good control of the weed, its frequent uses has led to abundant reported cases of resistance. Hence, the development of genetic markers for quick detection of glyphosate-resistance in E. indica population is imperative for the control and management of the weed. In this study, a total of 14 specific random amplified polymorphic DNA (RAPD) markers were identified and two of the markers, namely S4R727 and S26R6976 were further sequence characterized. Sequence alignment revealed that marker S4R727 showing a 12-bp nucleotides deletion in resistant biotypes, while marker S26R6976 contained a 167-bp nucleotides insertion in the resistant biotypes. Based on these sequence differences, three pairs of new sequence characterized amplified region (SCAR) primers were developed. The specificity of these primer pairs were further validated with genomic DNA extracted from ten individual plants of one glyphosate-susceptible and five glyphosate-resistant (R2, R4, R6, R8 and R11) populations. The resulting RAPD-SCAR markers provided the basis for assessing genetic diversity between glyphosate-susceptible and -resistant E. indica biotypes, as well for the identification of genetic locus link to glyphosate-resistance event in the species.

  12. The identification of biotypes of Bemisia tabaci in Hubei Province%湖北省烟粉虱生物型鉴定

    Institute of Scientific and Technical Information of China (English)

    陈冲; 马娟; 王欣茹; 覃春华; 李建洪

    2011-01-01

    Mitochondrial cytochrome oxidase Ⅰ (mtDNA COl) gene sequences were utilized to identify biotypes of Bemisa tabaci ( Gennadius ) in Hubei Province. Of the 720 bp COl sequences examined, those from populations in Dangyang,Xiantao,Tianmen ,Jianli, Yichang and Wuhan had as much as 100% similarity. COl sequences of B. tabaci from these six sites were also 100% similar to those of the Q biotype from the USA and Hubei Province. COl sequences of specimens of a B. tabaci population from Zaoyang were 100% similar to specimens of the B biotype from Israel,Zhejiang and Hubei Province. Ⅰ conclude that B. tabaci from Dang yang, Xiantao, Tianmen, Jianli, Yichang and Wuhan are of the Q biotype where those from Zaoyang are the B biotype.%本研究利用mtDNA COI基因片段作标记,通过序列分析对湖北省烟粉虱Bemisa tabaci(Gennadius)生物型进行了鉴定.结果表明当阳、仙桃、天门、监利、宜昌和武汉6个地理种群烟粉虱的720 bp COI基因序列的同源性高达100%,且该6个地理种群烟粉虱与USA-Q型烟粉虱、湖北Q型烟粉虱的同源性也高达100%.枣阳地区烟粉虱与Israel-B型烟粉虱、我国浙江B型烟粉虱、我国湖北B型烟粉虱的同源性为100%.由此可见当阳、仙桃、天门、监利、宜昌和武汉6个地区烟粉虱生物型属于Q型,仅枣阳地区烟粉虱属于B型.

  13. Fluorescent Pseudomonas isolates from Mississippi Delta oxbow lakes: in vitro herbicide biotransformations.

    Science.gov (United States)

    Zablotowicz, R M; Locke, M A; Hoagland, R E; Knight, S S; Cash, B

    2001-01-01

    Fluorescent pseudomonads were a major component [log (10) 4.2-6.1 colony-forming units mL-1] of the culturable heterotrophic gram-negative bacterioplankton observed in three Mississippi Delta oxbow lakes in this study. Pure cultures of fluorescent pseudomonads were isolated from three Mississippi Delta oxbow lakes (18 per lake), using selective media S-1. Classical physiological tests and Biolog GN plates were used in criteria for taxonomic identification. Most isolates were identified as biotypes of Pseudomonas fluorescens 55% (II), 7% (III), and 25% (V). About 7% of the isolates were identified as P. putida and 7% as non-fluorescent Pseudomonas-like. Cell suspensions of these isolates were tested for their ability to metabolize/co-metabolize six 14C-radiolabeled herbicides (2,4-dichlorophenoxyacetic acid (2,4-D), cyanazine, fluometuron, metolachlor, propanil, and trifluralin) that are commonly used for crop production in this geographical area. Almost all (53 of 54) isolates transformed trifluralin via aromatic nitroreduction. Most isolates (70%) dechlorinated metolachlor to polar metabolites via glutathione conjugation. About 60% of the isolates hydrolyzed the amide bond of propanil (a rice herbicide) to dichloroaniline, with the highest frequency of propanil-hydrolyzing isolates observed in the lake from the watershed with rice cultivation. All propanil-hydrolyzing isolates were identified as P. fluorescens biotype II. No metabolism of cyanazine or fluometuron was observed by any isolates tested, indicating little or no potential for N-dealkylation among this group of bacterioplankton. No mineralization of 2,4-D labeled in either the carboxyl or ring position was observed. These results indicate that reductive and hydrolytic pathways for herbicide co-metabolism (aromatic nitroreduction, aryl acylamidase, and glutathione conjugation) are common in Mississippi Delta aquatic fluorescent pseudomonads; however, the potential for certain oxidative transformations (N

  14. Sustained Local Diversity of Vibrio cholerae O1 Biotypes in a Previously Cholera-Free Country.

    Science.gov (United States)

    Boucher, Yan

    2016-01-01

    Although the current cholera pandemic can trace its origin to a specific time and place, many variants of Vibrio cholerae have caused this disease over the last 50 years. The relative clinical importance and geographical distribution of these variants have changed with time, but most remain in circulation. Some countries, such as Mexico and Haiti, had escaped the current pandemic, until large epidemics struck them in 1991 and 2010, respectively. Cholera has been endemic in these countries ever since. A recent retrospective study in mBio presents the results of more than 3 decades of V. cholerae monitoring from environmental and clinical sources in Mexico (S. Y. Choi et al., mBio 7:e02160-15, 2016, http://dx.doi.org/10.1128/mBio.02160-15). It reveals that multiple V. cholerae variants, including classical strains from the previous pandemic, as well as completely novel biotypes, have been circulating in Mexico. This discovery has important implications for the epidemiology and evolution of V. cholerae. PMID:27143391

  15. Sustained Local Diversity of Vibrio cholerae O1 Biotypes in a Previously Cholera-Free Country

    Directory of Open Access Journals (Sweden)

    Yan Boucher

    2016-07-01

    Full Text Available Although the current cholera pandemic can trace its origin to a specific time and place, many variants of Vibrio cholerae have caused this disease over the last 50 years. The relative clinical importance and geographical distribution of these variants have changed with time, but most remain in circulation. Some countries, such as Mexico and Haiti, had escaped the current pandemic, until large epidemics struck them in 1991 and 2010, respectively. Cholera has been endemic in these countries ever since. A recent retrospective study in mBio presents the results of more than 3 decades of V. cholerae monitoring from environmental and clinical sources in Mexico (S. Y. Choi et al., mBio 7:e02160-15, 2016, http://dx.doi.org/10.1128/mBio.02160-15. It reveals that multiple V. cholerae variants, including classical strains from the previous pandemic, as well as completely novel biotypes, have been circulating in Mexico. This discovery has important implications for the epidemiology and evolution of V. cholerae.

  16. Mating behaviour of host-specialized and migratory biotypes of the cotton aphid%寄主型和迁飞型棉蚜的交配行为

    Institute of Scientific and Technical Information of China (English)

    张帆; 刘向东

    2012-01-01

    Variation in host use and flight ability in the cotton aphid Aphis gossypii Clover is such that some biotypes can be regarded as cotton-specialized, cucurbits-specialized, migratory and sedentary. However, it is not known whether cotton-specialized and cucurbits-specialized biotypes, or migratory (M) and sedentary (S) biotypes, interbreed. The sexual forms of cotton-specialized, cucurbits-specialized, migratory, and sedentary biotypes were induced under reduced temperature and short photoperiod and their mating behavior was investigated. The results indicate that migratory and sedentary biotypes interbred, and the number of males that completed copulation within three hours did not significantly differ between inter-biotype and intra-biotype mating. However, it took significantly longer for males to find a mate of another biotype than one of their own biotype. The duration of copulation of M 9 X S S was also significantly longer than that of M ♀ x M ♂ and S ♀ ×M♂. Mating was more likely to occur when the male and female were of the same biotype than when they were from different biotypes. There was a trend towards assortative mating between migratory and sedentary biotypes. Interbreeding occurred between cotton-specialized (Co) and cucurbits-specialized (Cu) biotypes, and the time required for males to find a mate and complete copulation were similar between Co ♀ × Cu ♂ cross and Cu ♀ × Co ♂ cross.%棉蚜Aphis gossypii Glover种群存在寄主利用和迁飞能力上的明显分化,有棉花型和瓜型、迁飞型和滞留型之分.但是,棉花型与瓜型之间,以及迁飞型与滞留型之间是否能发生交配行为,尚无研究报道.本文在低温和短光照条件下分别诱导棉花型、瓜型、迁飞型和滞留型棉蚜的性蚜,并进行性蚜间的交配行为观察.结果表明,迁飞型和滞留型性蚜间可以发生交配行为,杂交时发生交配行为的个体比率与自交时无显著差异,但是杂交时雄蚜寻

  17. 4株荚膜型流感嗜血杆菌分型情况的比较%Comparison of typing among 4 haemophilus influenzae isolates with capsule

    Institute of Scientific and Technical Information of China (English)

    王复甦; 占利; 杨婷婷; 姚苹苹; 徐宝祥; 叶菊莲

    2012-01-01

    Objective:To provide fundamental information about bacterial typing for Hi - associated diseases control. Methods:Serotypes, biotypes, PFGE types and MLST(Multilocus Sequence Typing) types of 4 Haemophilus influenzae capsule strains isolated from children under 5 years old were analyzed. Results: It was found that the 2 Hib isolates were biotype Ⅰ, the Hie isolate was biotype Ⅲ , and the Hia/f which was cross reacted with antisera a and f capsule types belonged to biotype Ⅰ . The similarity of PFGE pattern among the 4 capsule Hi isolates varied between 48. 8 % ~ 58. 5 % , and the two biotype I Hibs only 48. 8 % . The ST types of 2 Hibs with the same biotype Ⅰ were both ST95 ,while the biotype Ⅲ Hie was ST - 18. The biotype Ⅰ Hia/f maybe a new ST type, waiting for submitting and verification. Conclusion: The association among 4 capsuled Hi is comparatively weak, suggesting thare is no dominant capsuled Hi type among human group. PFGE can be used to identify the source of Hi strains with the same serotype and biotype.%目的:为预防和控制Hi相关疾病提供菌株分型资料.方法:分析比较4株从5岁以下幼儿中分离的荚膜型流感嗜血杆菌(Haemophilus influenzae,Hi)的血清分型、生物分型、脉冲场凝胶电泳(PFGE)和多位点序列分型(MLST)的结果.结果:4株荚膜型Hi中,2株Hib均为生物Ⅰ型;1株Hie为生物Ⅲ型;1株与a、f荚膜型抗血清有交叉凝集的Hia/f为生物Ⅰ型.4株PFGE型的相似度,为48.8% ~ 58.5%,其中,2株Hib菌株之间的相似度仅为48.8%;MLST分型,2株Ⅰ型Hib同为ST-95型,1株生物Ⅲ型的Hie为ST-18型,1株生物Ⅰ型的Hia/f可能为新的ST型,等待提交验证.结论:4株荚膜型Hi彼此间遗传关联度小,提示人群中尚未形成优势荚膜型Hi的聚集.Hi当菌株生物型和血清型相同时,PFGE能较好地区分不同来源的菌株.

  18. [Isolated yeast species in urine samples in a Spanish regional hospital].

    Science.gov (United States)

    Heras-Cañas, Victor; Ros, Luis; Sorlózano, Antonio; Gutiérrez-Soto, Blanca; Navarro-Marí, José María; Gutiérrez-Fernández, José

    2015-01-01

    Candiduria detection in hospitalized or immunocompromised patients is of great clinical significance. The aim of our study was to describe the isolation frequency of significant species of yeasts in urine samples processed in our hospital during the period 2010- 2013, and to analyze their susceptibility to commonly used antifungal agents. Species identification was performed by seeding on a chromogenic medium, the filamentation test and automated systems (ASM Vitek and MALDI Biotyper), while susceptibility was determined using the ASM Vitek system. Of the 632 yeast isolates in urine, 371 were Candida albicans species and 261 non-C. albicans Candida spp. The species with the highest number of resistant isolates were Candida glabrata and Candida krusei. Based on the results obtained, we believe that species identification and the susceptibility study should be current practice in the laboratories when species other than C. albicans are isolated.

  19. Antibiotic resistance of microbial contaminations isolated from husbandry animals and foodstuffs

    Directory of Open Access Journals (Sweden)

    Lukáš Hleba

    2014-05-01

    Full Text Available In this paper the antibiotic resistance of microbial contaminations isolated from husbandry animals and foodstuffs were investigated. Microorganisms isolated from animals and foodstuffs were contaminations of selective media as MacConkey agar for Enterobacteriaceae genera and MRS agar for lactobacilli strains. Microorganisms were isolated and puryfied by agar four ways streak plate method. Identification of isolated microorganisms was done by mass-spectrometry method in MALDI-TOF MS Biotyper. For investigation of antibiotic resistance disc diffusion method by EUCAST was used. In this study Gram-negative and Gram-positive bacteria were identified. The most resistant or multi-resistant bacteria as Pseudomonas aeruginosa, Acinetobacter lwoffi, Lysinibacillus sphaericus, Staphylococcus aureus and Staphylococcus epidermis were determined. Other identified microorganisms were resistant to one antibiotic or not at all.

  20. Permanent Draft Genome Sequence of Frankia sp. Strain AvcI1, a Nitrogen-Fixing Actinobacterium Isolated from the Root Nodules of Alnus viridis subsp. crispa Grown in Canada

    OpenAIRE

    Swanson, Erik; Oshone, Rediet; Simpson, Stephen; Morris, Krystalynne; Abebe-Akele, Feseha; Thomas, W Kelley; Tisa, Louis S.

    2015-01-01

    Frankia strain AvcI1, isolated from root nodules of Alnus viridis subsp. crispa, is a member of Frankia lineage Ia, which is able to reinfect plants of the Betulaceae and Myricaceae families. Here, we report a 7.7-Mbp draft genome sequence with a G+C content of 72.41% and 6,470 candidate protein-encoding genes.

  1. 牙周探诊法判断牙龈生物型的初步研究%Preliminary study on gingival biotype by periodontal probing

    Institute of Scientific and Technical Information of China (English)

    乐迪; 张豪; 胡文杰; 柳登高

    2012-01-01

    目的 检验牙周探诊法判断牙龈生物型的准确性.方法 选择牙龈健康、20~30岁之间的青年14人(男6人,女8人),共66颗上颌前牙.通过判断牙周探针在探入的牙龈组织内轮廓是否清晰定性判断上颌前牙牙龈生物型;使用锥形束CT测量上颌前牙唇侧中央釉质牙骨质界处牙龈厚度,并分析其相互关系.结果 牙周探诊法判断牙龈生物型的方法具有良好的一致性(一致率为80%,Kappa=0.699)和可重复性(一致率为88%,Kappa=0.815);牙周探诊法定性判断牙龈生物型与锥形束CT定量测量牙龈厚度的结果一致,薄型、中间型、厚型3种牙龈的平均厚度分别为(1.02±0.20)、(1.28 ±0.25)和(1.46±0.25) mm,三者间差异有统计学意义(P =0.001).结论 牙周探诊法判断牙龈生物型是一种简便、相对客观、适用于临床的检查方法.%Objective To establish a convenient,objective and applicable method to assess gingival biotype using periodontal probing.Methods A total of 66 maxillary anterior teeth from 14 volunteers (6 males,8 females) with healthy gingiva,aged from 20 to 30 years,were recruited in this study.The gingival biotypes were evaluated by whether or not the outline of the periodontal probe was clear inside the gingiva.Gingival thickness of the cement6-enamel junction(CEJ) in upper anterior teeth was measured by cone-beam CT (CBCT).Results The method of periodontal probing-assessed gingival biotype had good consistency and repeatability. The result of probing-assessed gingival biotype was consistent with that obtained by CBCT. The mean thickness of gingiva in thin,compromised and thick gingival biotype was ( 1.02 ± 0.20),( 1.28 ± 0.25 ) and ( 1.46 ± 0.25 ) mm.These differences were significant for all three comparisons( P =0.001,respectively).Conclusions Periodontal probing-assessed gingival biotype is a simple,relatively objective and suitable method for clinical examination.

  2. From phenotyping to the study of clonal relationship of microbial isolates

    Directory of Open Access Journals (Sweden)

    Carla Fontana

    2014-03-01

    Full Text Available The term “typing” is generally used with two meanings: a methods to establish the correct taxonomic collocation of a genus/specie/biotype, b methods for discriminating different bacterial isolates of the same species in order to establish the genetic relationship among the microorganisms involved in a possible outbreak. In this paper we focus our attention on the second aspect, that represents a relevant epidemiological tools in infection prevention and control. Typing systems are traditionally based on two steps workup: the first is the study of phenotypes such as serotype, biotype, phage-type, or antimicrobial susceptibilities of the isolates and this can be easily performed in every microbiology laboratory; the second, examines the relatedness of isolates at a molecular level. Over the years many molecular methods have been developed and efficiently applied in several hospital settings. The large panorama of methods put the microbiologists in trouble to operate the proper choice. Thus, in the present paper, we have reviewed old as well new molecular typing methods in order to provide a useful guide that can represent an overview on molecular methods and particularly of their specific pro and cons.

  3. Evaluation of an experimental and commercial state-of-the-art vaccine against enteric redmouth disease (ERM) in rainbow trout by waterborne challenge with Y. ruckeri O1 biotype 2

    DEFF Research Database (Denmark)

    Kragelund Strøm, Helene; Otani, Maki; Villumsen, Kasper Rømer;

    In recent years, there has been an increase in reported outbreaks of enteric redmouth disease (ERM) in ERM vaccinated farmed rainbow trout in a number of countries, including the United States and a range of European countries such as Denmark, Spain and the UK, which both affect animal welfare...... strain obtained from an ERM disease outbreak in a Danish trout farm. This waterborne infection model gives us the opportunity to test and evaluate the effect of commercial and experimental vaccines against Y. ruckeri O1 biotype 2. An experimental vaccine containing equal amounts of Y. ruckeri O1 biotype...... has been compared to a state-of-the-art commercial ERM immersion vaccine (AquaVac® ReleraTM). Un-vaccinated and sham vaccinated rainbow trout were included as controls. Two months post vaccination the rainbow trout were challenged in duplicate with Y. ruckeri O1 biotype 2 by bath. No effect...

  4. Tomato pathogenesis-related protein genes are expressed in response to Trialeurodes vaporariorum and Bemisia tabaci biotype B feeding.

    Science.gov (United States)

    Puthoff, David P; Holzer, Frances M; Perring, Thomas M; Walling, Linda L

    2010-11-01

    The temporal and spatial expression of tomato wound- and defense-response genes to Bemisia tabaci biotype B (the silverleaf whitefly) and Trialeurodes vaporariorum (the greenhouse whitefly) feeding were characterized. Both species of whiteflies evoked similar changes in tomato gene expression. The levels of RNAs for the methyl jasmonic acid (MeJA)- or ethylene-regulated genes that encode the basic β-1,3-glucanase (GluB), basic chitinase (Chi9), and Pathogenesis-related protein-1 (PR-1) were monitored. GluB and Chi9 RNAs were abundant in infested leaves from the time nymphs initiated feeding (day 5). In addition, GluB RNAs accumulated in apical non-infested leaves. PR-1 RNAs also accumulated after whitefly feeding. In contrast, the ethylene- and salicylic acid (SA)-regulated Chi3 and PR-4 genes had RNAs that accumulated at low levels and GluAC RNAs that were undetectable in whitefly-infested tomato leaves. The changes in Phenylalanine ammonia lyase5 (PAL5) were variable; in some, but not all infestations, PAL5 RNAs increased in response to whitefly feeding. PAL5 RNA levels increased in response to MeJA, ethylene, and abscisic acid, and declined in response to SA. Transcripts from the wound-response genes, leucine aminopeptidase (LapA1) and proteinase inhibitor 2 (pin2), were not detected following whitefly feeding. Furthermore, whitefly infestation of transgenic LapA1:GUS tomato plants showed that whitefly feeding did not activate the LapA1 promoter, although crushing of the leaf lamina increased GUS activity up to 40 fold. These studies indicate that tomato plants perceive B. tabaci and T. vaporariorum in a manner similar to baterical pathogens and distinct from tissue-damaging insects.

  5. 烟粉虱 B 型和 Q 型竞争能力的室内比较分析%Comparative Analysis of the Competitiveness Between B and Q Biotypes of Bemisia tabaci Under Laboratory Conditions

    Institute of Scientific and Technical Information of China (English)

    卢少华; 李静静; 刘明杨; 白润娥; 汤清波; 闫凤鸣

    2015-01-01

    [Objective]B and Q biotypes of Bemisia tabaci are two invasive cryptic species in China. The field investigation showed that Q biotype is becoming the dominant replacing B biotype in most areas of China in recent years. It is necessary to research the mechanisms and the influencing factor of the B. tabaci biotype replacement. Differences of feeding behaviors and competitiveness between B and Q biotypes of B. tabaci were compared under laboratory conditions, aiming to provide a basis for effective management of whiteflies. [Method] The stylet probing behaviors of B and Q biotypes of B. tabaci on Cucumis sativus were recorded and analyzed by using the electrical penetration graph (EPG) technique. The competitiveness of the two biotypes of B. tabaci was compared by investigating the population dynamics of the two biotypes in six successive generations on C. sativus.[Result] EPG results showed that B biotype B. tabaci had significantly more total number of probes (P=0.020) and longer total duration of probes (P=0.048) than Q biotype, and during the 2nd phase, the percentage of E was mainly lower (P=0.001) in B biotype than Q biotype, but there was no significant difference in percentage of probing duration between the two biotypes. Q biotype had significantly more total number of Pd (potential drop) (P=0.012) and longer total duration of Pd (P=0.016). For comparison of males and females in the same biotype, B biotype females were significantly lower than B biotype males in the percentage of Np (P=0.035) and the percentage of E (P0.05) in the 3rd phase between males and females of B biotype. For Q biotype, females not only had significantly higher percentage of probing duration (P=0.031) in the 2nd phase than Q biotype males, but also had significantly longer total duration of probes (P=0.039). Q biotype females had significantly shorter total duration of Np (P=0.038) than Q biotype males. There were no significant differences between males of B and Q biotypes for all

  6. 微卫星位点在Q型烟粉虱入侵种群中的多态性分析%Polymorphisms of microsatellite loci within invasive populations of Bemisia tabaci biotype Q

    Institute of Scientific and Technical Information of China (English)

    刘国霞; 褚栋

    2011-01-01

    During the past several years, the Bemisia tabaci (Gennadius) Q-biotype has invaded China and become the predominant biotype by replacing the previously established B-biotype in some areas. B. tabaci's genetic polymorphism could be influenced by the invasion process and pesticides used. The polymorphism information content (PIC) of 4 microsatellite loci in Q-biotype populations from Shandong Province was assessed and used to determine the genetic diversity of these populations. The results show that all 4 loci were moderately or highly polymorphic indicating that these loci are informative for determining the genetic diversity of invasive Q-biotype populations. These results provide a foundation for determining the utility of microsatellite markers in the invasive Q-biotype.%近年来烟粉虱Bemisia tabaci(Gennadius) Q 型入侵我国并在部分地区取代B型成为了烟粉虱优势生物型.外来物种的入侵过程及农药使用等因素可影响种群的遗传多样性水平及其遗传结构.本研究分析了4个微卫星位点在Q型烟粉虱入侵种群的多态信息含量(PIC),并在此基础上进行了遗传多样性分析.结果表明这些微卫星位点在Q型烟粉虱入侵种群中具有中度或高度多态性,说明微卫星位点能有效分析Q型入侵种群的遗传多态性.本研究为利用微卫星标记研究Q型入侵种群的遗传结构奠定了基础.

  7. Resposta de biótipos de Euphorbia heterophylla a doses de glyphosate Response of Euphorbia heterophylla biotypes to glyphosate rates

    Directory of Open Access Journals (Sweden)

    L Vargas

    2011-01-01

    Full Text Available A leiteira (Euphorbia heterophylla é uma planta daninha de ciclo anual encontrada com frequência em lavouras de soja na região Sul do Brasil, controlada em lavouras de soja geneticamente modificada (Roundup Ready® - RR com uso do herbicida glyphosate. Entretanto, nos últimos anos, o controle dessa espécie não tem sido satisfatório em alguns locais, provocando a suspeita de que foram selecionados biótipos resistentes ao herbicida. Diante disso, o objetivo deste trabalho foi avaliar, por meio de curvas de dose-resposta, biótipos de leiteira com suspeita de resistência ao glyphosate. O experimento foi realizado em casa de vegetação, em delineamento experimental completamente casualizado, com quatro repetições. Os tratamentos constituíram-se de doses crescentes de glyphosate (0, 90, 180, 360, 720, 1.080, 1.440 e 2.160 g e.a. ha-1, aplicadas sobre cinco biótipos de leiteira, oriundos de lavouras de soja RR do Estado do Rio Grande do Sul. As variáveis avaliadas foram controle e matéria seca da parte aérea. Os resultados evidenciam que os biótipos de leiteira avaliados são suscetíveis ao glyphosate.Wild poinsettia is an annual cycle weed, commonly found in soybean crop in southern Brazil. It is controlled by glyphosate in genetically- modified soybean (Roundup Ready® - RR. The control of this species has not proven to be satisfactory in some places in the last years, leading to the suspicion that biotypes resistant to glyphosate have been selected. The objective this work was to evaluate, by response-dose curve, wild poinsettia biotypes with suspected resistance to glyphosate. The experiment was conducted under greenhouse conditions and the experiment was arranged in a randomized complete block design, with four replications. The treatments consisted of increased application rates of glyphosate (0, 90, 180, 360, 720, 1,080, 1,440 and 2,160 g a.e. ha-1 on five wild poinsettia biotypes, from crop soybean RR in the state of Rio

  8. Permanent Draft Genome Sequence of Frankia sp. Strain AvcI1, a Nitrogen-Fixing Actinobacterium Isolated from the Root Nodules of Alnus viridis subsp. crispa Grown in Canada.

    Science.gov (United States)

    Swanson, Erik; Oshone, Rediet; Simpson, Stephen; Morris, Krystalynne; Abebe-Akele, Feseha; Thomas, W Kelley; Tisa, Louis S

    2015-01-01

    Frankia strain AvcI1, isolated from root nodules of Alnus viridis subsp. crispa, is a member of Frankia lineage Ia, which is able to reinfect plants of the Betulaceae and Myricaceae families. Here, we report a 7.7-Mbp draft genome sequence with a G+C content of 72.41% and 6,470 candidate protein-encoding genes. PMID:26722013

  9. Draft Genome Sequence of Halobacillus sp. Strain KGW1, a Moderately Halophilic and Alkaline Protease-Producing Bacterium Isolated from the Rhizospheric Region of Phragmites karka from Chilika Lake, Odisha, India.

    Science.gov (United States)

    Panda, Ananta Narayan; Mishra, Samir R; Ray, Lopamudra; Sahu, Neha; Acharya, Ankita; Jadhao, Sudhir; Suar, Mrutyunjay; Adhya, Tapan Kumar; Rastogi, Gurdeep; Pattnaik, Ajit Kumar; Raina, Vishakha

    2016-01-01

    Halobacillus sp. strain KGW1 is a moderately halophilic, rod shaped, Gram-positive, yellow pigmented, alkaline protease-producing bacterium isolated from a water sample from Chilika Lake, Odisha, India. Sequencing of bacterial DNA assembled a 3.68-Mb draft genome. The genome annotation analysis showed various gene clusters for tolerance to stress, such as elevated pH, salt concentration, and toxic metals. PMID:27365341

  10. Draft Genome Sequence of Halobacillus sp. Strain KGW1, a Moderately Halophilic and Alkaline Protease-Producing Bacterium Isolated from the Rhizospheric Region of Phragmites karka from Chilika Lake, Odisha, India

    Science.gov (United States)

    Panda, Ananta Narayan; Mishra, Samir R.; Ray, Lopamudra; Sahu, Neha; Acharya, Ankita; Jadhao, Sudhir; Suar, Mrutyunjay; Adhya, Tapan Kumar; Rastogi, Gurdeep; Pattnaik, Ajit Kumar

    2016-01-01

    Halobacillus sp. strain KGW1 is a moderately halophilic, rod shaped, Gram-positive, yellow pigmented, alkaline protease-producing bacterium isolated from a water sample from Chilika Lake, Odisha, India. Sequencing of bacterial DNA assembled a 3.68-Mb draft genome. The genome annotation analysis showed various gene clusters for tolerance to stress, such as elevated pH, salt concentration, and toxic metals. PMID:27365341

  11. Draft Genome Sequence of Halobacillus sp. Strain KGW1, a Moderately Halophilic and Alkaline Protease-Producing Bacterium Isolated from the Rhizospheric Region of Phragmites karka from Chilika Lake, Odisha, India

    OpenAIRE

    Panda, Ananta Narayan; Mishra, Samir R.; Ray, Lopamudra; Sahu, Neha; Acharya, Ankita; Jadhao, Sudhir; Suar, Mrutyunjay; Adhya, Tapan Kumar; Rastogi, Gurdeep; Pattnaik, Ajit Kumar; Raina, Vishakha

    2016-01-01

    Halobacillus sp. strain KGW1 is a moderately halophilic, rod shaped, Gram-positive, yellow pigmented, alkaline protease-producing bacterium isolated from a water sample from Chilika Lake, Odisha, India. Sequencing of bacterial DNA assembled a 3.68-Mb draft genome. The genome annotation analysis showed various gene clusters for tolerance to stress, such as elevated pH, salt concentration, and toxic metals.

  12. Biotypes Identification and Damage Analysis of Bemisia tabaci ( Gennadius)in Shaanxi Area%陕西地区烟粉虱生物型的鉴定及其危害分析

    Institute of Scientific and Technical Information of China (English)

    赵瑞华; 邓振山; 贺晓龙

    2015-01-01

    To evaluate main biotypes and damage of Bemisia tabaci( Gennadius)in Shaanxi area,we analyzed the ex-tent of damage through investigation and identified the variety of biotypes in Shaanxi main host plants by mtDNA COI sequences of Bemisia tabaci. The sequence analysis results indicated that the B and Q biotypes B. tabaci co-existed in Shaanxi area,and B biotype B. tabaci was 78. 85%. The results showed that B biotype still was the main biotype ,but Q biotype spreads widely in Shaanxi area and may replace B biotype as a major crop pest in Shaanxi ar-ea. B. tabaci damaged crops seriously such as tobacco,sweet pepper,tomato of solanaceae and cucumber,pumpkin of cucurbitaceae. But the plants of cruciferae were damaged lightly,and damagous to potato of solanaceae and cow-pea,peas of leguminosae were lightest.%为探明陕西地区烟粉虱的危害及主要生物型,实地调查了陕西地区主要农作物上烟粉虱的危害状况与发生程度,并利用mtDNACOI基因测序方法,对陕西地区烟粉虱的生物型组成进行了分析鉴定.同源性分析结果表明,B型和Q型烟粉虱是陕西地区烟粉虱种群的主要生物型,其中B型占所测总样本的78. 85%,表明陕西省烟粉虱主要生物型仍是B型,但Q型种群比例在增长,不排除有取代B型成为陕西地区烟粉虱主要危害类型的趋势.在陕西地区烟粉虱主要危害的植物是茄科的烟草、甜椒、番茄以及葫芦科的黄瓜、西葫芦,而十字花科植物普遍受害较轻,茄科的马铃薯和豆科的豇豆、豌豆受害最轻.

  13. Molecular Characterisation of Salmonella enterica Serovar Typhi Isolated from Typhoidial Humans

    Directory of Open Access Journals (Sweden)

    Arunava Das

    2012-09-01

    Full Text Available Aims: Salmonella enterica serovar Typhi is the major causative agent for typhoidial fever around the globe among human population reported till date. Present research work was carried out for detection and molecular characterisation of Salmonella enterica serovar Typhi isolated from humans with Typhoidial fever by biochemical, phenotypical and virulence gene based polymerase chain reaction (PCR techniques. The isolated strains were also investigated for antibiotic susceptibility patterns as a control measure. Methodology and Results: A total of 16 clinical samples were collected from the same numbers of patients (7 males and 9 females from Coimbatore, Erode and Salem districts of Tamil Nadu and were processed via broth enrichment methods for isolation and identification of the causative agent S. enterica serovar Typhi. Microbiological and biochemical investigations revealed the presence of S. Typhi from 16 samples. The biotyping of the isolates showed that all the isolates belonged to biotype IV. The PCR analysis confirmed the presence of invA (Invasion gene, 244bp, tyv (Tyveloseepimerase gene, 615 bp, fliC-d (Phage-1 flagellin gene for d-antigen, 750 bp and viaB (Vi antigen gene, 439bp in all 16 clinical samples. The antibiotic susceptibility test that was carried out among the isolates against 12 antimicrobial agents, showed 100 % resistance to only ampicillin and 100 % sensitivity to carbenicillin, chloramphenicol, clindamycin, gentamycin, kanamycin and tetracycline.Conclusion, significance and impact of study: This study confirmed the association of virulent strains of S. enterica serovar Typhi from Typhoidial fever among human population and suggested that PCR based diagnostic could be very useful for the rapid detection of S. Typhi isolates. Present study emphasized the use of antibiotic like chloramphenicol or in combination with other antibiotics for the effective control of S. Typhi.

  14. Clinical significance and evaluation methods of gingival biotype%牙龈生物型的临床意义和评估方法

    Institute of Scientific and Technical Information of China (English)

    张瑞

    2013-01-01

    牙龈组织的形态因人而异,不同形态的牙龈在经过口腔的各种治疗后会有不同的结果和预后.因此在口腔治疗之前,对牙龈形态的评估逐渐为各个学科所重视.Oschenbein等针对牙龈的不同形态提出了“厚”与“薄”牙龈生物型的概念,随后许多学者均对牙龈生物型进行了相应的研究并取得了一定的成果,对牙龈生物型的评估和检测方法已有多种.本文就牙龈生物型的临床意义和评估方法作一综述.%Gingival morphology might be individually different , and it the plays an important role in oral treatments. Attention shoud be paid to the character of gingival form. Oschenbein described the various forms of gingiva and gave the concept of gingival biotypt including two basic types; "thick" and "thin" . Several study obtained various conclusions. The gingival biotype may be related to the methods of periodontal treatment. The clinical significance and evaluation methods of gingival biotype are summarized in this paper.

  15. Characterization of main primary and secondary metabolites and in vitro antioxidant and antihyperglycemic properties in the mesocarp of three biotypes of Pouteria lucuma.

    Science.gov (United States)

    Fuentealba, Claudia; Gálvez, Lena; Cobos, Ariel; Olaeta, José Antonio; Defilippi, Bruno G; Chirinos, Rosana; Campos, David; Pedreschi, Romina

    2016-01-01

    Pouteria lucuma is an Andean fruit from pre-Incas' times highly appreciated due to its characteristic flavor and taste in its homeland. We characterized the primary (e.g., sugars and organic acids), and secondary (e.g., phenolics and carotenoids) and in vitro antioxidant and antihyperglycemic properties of Rosalia, Montero and Leiva 1 lucuma biotypes. Significant differences were found in these metabolites and functional properties related to biotype and ripeness stage. Results showed significant amounts of sugars (119.4-344 mg total sugars g(-1)DW) and organic acids (44.4-30.0 mg g(-1)DW) and functional associated compounds such as ascorbic acid (0.35-1.07 mg g(-1)DW), total phenolics (0.7-61.6 mg GAE g(-1)DW) and total carotenoids (0.22-0.50 mg β-carotene g(-1)DW). Important in vitro antioxidant and antihyperglycemic properties were found and provide the base for the standardization of lucuma harvest and postharvest focused not only on the enhancement of sensory but functional properties. PMID:26212989

  16. Isolation and Classification of Fungal Whitefly Entomopathogens from Soils of Qinghai-Tibet Plateau and Gansu Corridor in China.

    Science.gov (United States)

    Dong, Tingyan; Zhang, Bowen; Jiang, Yanfang; Hu, Qiongbo

    2016-01-01

    Qinghai-Tibet Plateau and Gansu Corridor of China with distinct geographic and climatic conditions are remote and less disturbed by humans, in which are likely to find some new strains of fungal entomopathogens against B-biotype whiteflies that is a very important invading pest worldwide. In this research, nineteen strains among six species of entomogenous fungi were isolated from the soil samples collected from 32 locations in Qinghai-Tibet Plateau and Gansu Corridor. From the data of isolation rates, it was indicated that the good biodiversity of entomogenous fungi was found in the soil covered good vegetations. On the contrary, no strains were isolated from the desert areas. In addition, the dominant species, Isaria fumosorosea and Metarhizium anisopliae var. anisopliae in the Qinghai-Tibet Plateau are different from the strains of other places based on ITS genetic homology analysis. It was verified that the Qinghai-Tibet Plateau area was less disturbed by human, and the fungi in this place exchanged less compared with other regional species. All of these strains showed the pathogenicity against the B-biotype whitefly with the mortality of more than 30%. However, a few strains of Paecilomyces lilacinus, Lecanicillium psalliotae, Aspergillus ustus, I. fumosorosea and M. anisopliae var. anisopliae had better virulence with LC50s of 0.36-26.44×106 spores/mL on post-treatment day 6-7. Especially, the L. psalliotae strain LpTS01 was the greatest virulence with LC50 of 0.36×106spores/mL and LT50 of 4.23d. Our research thus presents some new insights to discover new entomopathogenic fungal strains used for B-biotype whitefly biocontrol.

  17. Isolation and Classification of Fungal Whitefly Entomopathogens from Soils of Qinghai-Tibet Plateau and Gansu Corridor in China.

    Directory of Open Access Journals (Sweden)

    Tingyan Dong

    Full Text Available Qinghai-Tibet Plateau and Gansu Corridor of China with distinct geographic and climatic conditions are remote and less disturbed by humans, in which are likely to find some new strains of fungal entomopathogens against B-biotype whiteflies that is a very important invading pest worldwide. In this research, nineteen strains among six species of entomogenous fungi were isolated from the soil samples collected from 32 locations in Qinghai-Tibet Plateau and Gansu Corridor. From the data of isolation rates, it was indicated that the good biodiversity of entomogenous fungi was found in the soil covered good vegetations. On the contrary, no strains were isolated from the desert areas. In addition, the dominant species, Isaria fumosorosea and Metarhizium anisopliae var. anisopliae in the Qinghai-Tibet Plateau are different from the strains of other places based on ITS genetic homology analysis. It was verified that the Qinghai-Tibet Plateau area was less disturbed by human, and the fungi in this place exchanged less compared with other regional species. All of these strains showed the pathogenicity against the B-biotype whitefly with the mortality of more than 30%. However, a few strains of Paecilomyces lilacinus, Lecanicillium psalliotae, Aspergillus ustus, I. fumosorosea and M. anisopliae var. anisopliae had better virulence with LC50s of 0.36-26.44×106 spores/mL on post-treatment day 6-7. Especially, the L. psalliotae strain LpTS01 was the greatest virulence with LC50 of 0.36×106spores/mL and LT50 of 4.23d. Our research thus presents some new insights to discover new entomopathogenic fungal strains used for B-biotype whitefly biocontrol.

  18. Isolation and Classification of Fungal Whitefly Entomopathogens from Soils of Qinghai-Tibet Plateau and Gansu Corridor in China.

    Science.gov (United States)

    Dong, Tingyan; Zhang, Bowen; Jiang, Yanfang; Hu, Qiongbo

    2016-01-01

    Qinghai-Tibet Plateau and Gansu Corridor of China with distinct geographic and climatic conditions are remote and less disturbed by humans, in which are likely to find some new strains of fungal entomopathogens against B-biotype whiteflies that is a very important invading pest worldwide. In this research, nineteen strains among six species of entomogenous fungi were isolated from the soil samples collected from 32 locations in Qinghai-Tibet Plateau and Gansu Corridor. From the data of isolation rates, it was indicated that the good biodiversity of entomogenous fungi was found in the soil covered good vegetations. On the contrary, no strains were isolated from the desert areas. In addition, the dominant species, Isaria fumosorosea and Metarhizium anisopliae var. anisopliae in the Qinghai-Tibet Plateau are different from the strains of other places based on ITS genetic homology analysis. It was verified that the Qinghai-Tibet Plateau area was less disturbed by human, and the fungi in this place exchanged less compared with other regional species. All of these strains showed the pathogenicity against the B-biotype whitefly with the mortality of more than 30%. However, a few strains of Paecilomyces lilacinus, Lecanicillium psalliotae, Aspergillus ustus, I. fumosorosea and M. anisopliae var. anisopliae had better virulence with LC50s of 0.36-26.44×106 spores/mL on post-treatment day 6-7. Especially, the L. psalliotae strain LpTS01 was the greatest virulence with LC50 of 0.36×106spores/mL and LT50 of 4.23d. Our research thus presents some new insights to discover new entomopathogenic fungal strains used for B-biotype whitefly biocontrol. PMID:27228109

  19. Competitividade de biótipos de capim-arroz resistente e suscetível ao quinclorac Competitiveness of echinochloa biotypes resistant and susceptible to quinclorac

    Directory of Open Access Journals (Sweden)

    G. Concenço

    2008-03-01

    Full Text Available Objetivou-se com este trabalho avaliar a competitividade de dois biótipos de capim-arroz, resistente e suscetível ao quinclorac, coletados em regiões orizícolas do Estado de Santa Catarina. O experimento foi instalado em ambiente protegido, e os tratamentos constaram de diferentes densidades de plantas dos biótipos de capim-arroz comprovadamente resistente (ITJ-13 e suscetível (ITJ-17 ao quinclorac, oriundos da região arrozeira de Itajaí/SC. No centro da unidade experimental, foram semeadas três sementes do biótipo de capim-arroz, considerado como o tratamento da unidade experimental. Na periferia foram semeadas dez sementes do biótipo oposto ao do tratamento (central. Dez dias após a germinação foi efetuado o desbaste, deixando-se apenas uma planta no centro da unidade experimental e um número variável de plantas do biótipo oposto, de acordo com o tratamento (0, 1, 2, 3, 4 ou 5 plantas por vaso. O delineamento experimental utilizado foi o completamente casualizado, em esquema fatorial 2 x 6, com quatro repetições. Aos 40 dias após a emergência, foram avaliados altura de plantas, número de afilhos e de folhas, área foliar, massa fresca e seca e conteúdo de água de colmos e folhas. Os dados foram analisados pelo teste F, sendo efetuado teste de Duncan para comparar o efeito de densidade de plantas e teste da Diferença Mínima Significativa (DMS para avaliar diferenças entre os biótipos resistente e suscetível, além de correlação linear simples entre as variáveis avaliadas. Nas análises, utilizou-se o nível de 5% de probabilidade. Os biótipos estudados de capim-arroz resistente e suscetível ao quinclorac são similares quando sob alta intensidade de competição, com vantagem em algumas variáveis para o biótipo suscetível sob baixa ou moderada intensidade competitiva.The objective of this research was to evaluate the competitive potential of two Echinochloa sp. biotypes, resistant and susceptible to

  20. Resistência ao glyphosate em biótipos de Conyza bonariensis e Conyza canadensis no Estado do Rio Grande do Sul, Brasil Resistance to glyphosate in Conyza bonariensis and Conyza canadensis biotypes in Rio Grande do Sul, Brazil

    Directory of Open Access Journals (Sweden)

    F.P. Lamego

    2008-06-01

    Full Text Available Experimentos de curva de dose-resposta foram conduzidos para avaliar a ocorrência de resistência ao glyphosate em biótipos de Conyza canadensis e Conyza bonariensis oriundos de municípios do Rio Grande do Sul. Para cada espécie foi realizado um experimento com dois biótipos um suscetível e outro com suspeita de resistência. Glyphosate nas doses de 0, 100, 200, 300, 400, 800 e 1.200 g ha-1 foi aplicado em plantas no estádio de 8-10 folhas. Curvas sigmoidais foram ajustadas para todos os biótipos testados. Confirmou-se a resistência ao glyphosate em biótipos de ambas as espécies, com fator de resistência em torno de 2,3.Dose-response experiments were conducted to evaluate the occurrence of resistance to glyphosate in Conyza canadensis and Conyza bonariensis biotypes originated from Rio Grande do Sul counties. For each species, one experiment was conducted with two biotypes, one susceptible and one suspected of resistance. Glyphosate rates of 0, 100, 200, 300, 400, 800 and 1200 g ha-1 were sprayed on the plants after reaching the 8-10 leaf growth stage. Sigmoidal curves were adjusted to each biotype tested. Resistance to glyphosate was confirmed for biotypes of both species with resistance factor of 2.3.

  1. Molecular epidemiology of Vibrio cholerae O1 isolated in Nepal by southern hybridization with a cholera toxin gene probe.

    Science.gov (United States)

    Yamamoto, K; Shrestha, J; Iida, T; Yoh, M; Honda, T

    1995-06-01

    A cholera epidemic broke out in 1992 due to Vibrio cholerae O1 biotype El Tor in the eastern and southern belt of Nepal mainly among the Bhutanese refugees. Restriction fragment profiles (RFP) of DNA fragments of V. cholerae O1 isolates hybridized with an enzyme-labelled oligonucleotide probe for cholera toxin gene (ctx) by Southern Hybridization were compared. The probe hybridized with the 13- and 8-kb fragments of PstI-digested total DNA in all isolates observed in the epidemic. This RFP in the Nepalese strain was not observed in the strains isolated during other epidemics but was observed in the strains isolated from the exported marine products from Taiwan and Thailand. PMID:7594311

  2. Glyphosate translocation in hairy fleabane (Conyza bonariensis biotypes Translocação do glyphosate em biótipos de buva (Conyza bonariensis

    Directory of Open Access Journals (Sweden)

    E.A. Ferreira

    2008-01-01

    Full Text Available The objective of this work was to evaluate the translocation of glyphosate in C. bonariensis plants resistant and susceptible to that herbicide. The 14C-glyphosate was mixed with commercial gyhphosate (800 g ha-1 and applied on the center of the adaxial face of a third node leaf, using a micro syringe, and adding 10 µL of a solution with specific activity of 1,400 Bq, 45 days after plant emergence. The concentration of the glyphosate translocated in the plant was evaluated at time intervals of 6, 12, 36 and 72 hours after being applied on the application leaf, stem, roots and leaves. Ten hours after treatment application, the distribution of the product in the application leaf, divided into base, center and apex, was also evaluated by measuring the radiation emitted by 14C-glyphosate in a liquid scintillation spectrometer. Greater glyphosate retention was observed in the resistant biotype leaf, approximately 90% of the total absorbed up to 72 hours. In the susceptible biotype, this value was close to 70% in the same period. Susceptible biotype leaves, stem and roots showed greater concentration of glyphosate, indicating greater translocation efficiency in this biotype. In the resistant biotype, the herbicide accumulated in greater quantity at the apex and center of the application leaf, while in the susceptible biotype greater accumulation was observed at the base and center leaf. Thus, it can be stated that the resistance mechanism is related to the differential translocation of this herbicide in the biotypes.Objetivou-se com este trabalho avaliar a translocação do glyphosate em plantas de C. bonariensis resistentes e suscetíveis a esse herbicida. Para isso aplicou-se o 14C-glyphosate em mistura com glyphosate comercial (800 g ha-1 sobre o centro da face adaxial da folha do terceiro nó, utilizando-se uma microsseringa, adicionando-se 10 µL da calda com atividade específica de 1.400 Bq, aos 45 dias após a emergência da buva. A concentra

  3. Buva (Conyza bonariensis resistente ao glyphosate na região sul do Brasil Conyza bonariensis biotypes resistant to the glyphosate in southern Brazil

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    L. Vargas

    2007-09-01

    com mecanismo de ação distinto daquele do glyphosate. Entretanto, o biótipo resistente mostra baixa resposta ao herbicida glyphosate, mesmo se este for empregado em doses elevadas, evidenciando ter adquirido resistência a esse produto.Glyphosate is a non-selective herbicide used for over 20 years to control weeds in Rio Grande do Sul. Horseweed (Conyza bonariensis is a common weed in Rio Grande do Sul and traditionally sensitive to glyphosate. However, during the last years, some horseweed plants have not shown significant injury symptoms after treatment with glyphosate, suggesting that they are resistant to this herbicide. Aiming to evaluate the response of a population of horseweed plants to glyphosate, one field and two greenhouse experiments were carried out. The field experiment treatment had increasing rates of glyphosate (0, 360, 720, 1,440, 2,880 and 5,760 g ha-1, and also the herbicides paraquat and 2,4-D as standards. The greenhouse experiments had increasing rates of glyphosate (0, 360, 720, 1,440, 2,880 and 5,760 g ha-1 plus the above listed check herbicides sprayed on biotypes considered resistant and on plants of one susceptible biotype. In the second greenhouse experiment, the treatments were increasing rates of glyphosate (720, 1,440 and 2,880 g ha-1 and herbicides chlorimuron-ethyl, metsulfuron-methyl, 2,4-D, paraquat and diuron + paraquat sprayed on plants of resistant and susceptible biotypes. Horseweed control was accessed at 7, 15 and 30 DAT (days after treatment. Overall results of the field and greenhouse experiments provided evidence that the susceptible biotype is easily controlled by glyphosate and the other tested herbicides. In addition, the results demonstrated that the resistant biotype, as the susceptible biotype, is highly sensitive to herbicides with mode of action that differs from glyphosate. However, the resistant biotype showed low response to glyphosate, even at very high rates, confirming resistance of this horseweed

  4. Isolation and characterization of TgVP1, a type I vacuolar H+-translocating pyrophosphatase from Toxoplasma gondii. The dynamics of its subcellular localization and the cellular effects of a diphosphonate inhibitor.

    Science.gov (United States)

    Drozdowicz, Yolanda M; Shaw, Michael; Nishi, Manami; Striepen, Boris; Liwinski, Helene A; Roos, David S; Rea, Philip A

    2003-01-10

    Here we report the isolation and characterization of a type I vacuolar-type H(+)-pyrophosphatase (V-PPase), TgVP1, from an apicomplexan, Toxoplasma gondii, a parasitic protist that is particularly amenable to molecular and genetic manipulation. The 816-amino acid TgVP1 polypeptide is 50% sequence-identical (65% similar) to the prototypical type I V-PPase from Arabidopsis thaliana, AVP1, and contains all the sequence motifs characteristic of this pump category. Unlike AVP1 and other known type I enzymes, however, TgVP1 contains a 74-residue N-terminal extension encompassing a 42-residue N-terminal signal peptide sequence, sufficient for targeting proteins to the secretory pathway of T. gondii. Providing that the coding sequence for the entire N-terminal extension is omitted from the plasmid, transformation of Saccharomyces cerevisiae with plasmid-borne TgVP1 yields a stable and functional translation product that is competent in aminomethylenediphosphonate (AMDP)-inhibitable K(+)-activated pyrophosphate (PP(i)) hydrolysis and PP(i)-energized H(+) translocation. Immunofluorescence microscopy of both free and intracellular T. gondii tachyzoites using purified universal V-PPase polyclonal antibodies reveals a punctate apical distribution for the enzyme. Equivalent studies of the tachyzoites during host cell invasion, by contrast, disclose a transverse radial distribution in which the V-PPase is associated with a collar-like structure that migrates along the length of the parasite in synchrony with and in close apposition to the penetration furrow. Although treatment of T. gondii with AMDP concentrations as high as 100 microm had no discernible effect on the efficiency of host cell invasion and integration, concentrations commensurate with the I(50) for the inhibition of TgVP1 activity in vitro (0.9 microm) do inhibit cell division and elicit nuclear enlargement concomitant with the inflation and eventual disintegration of acidocalcisome-like vesicular structures. A

  5. Flower-bud formation in explants of photoperiodic and day-neutral Nicotiana biotypes and its bearing on the regulation of flower formation

    Energy Technology Data Exchange (ETDEWEB)

    Rajeevan, M.S.; Lang, A. (Michigan State Univ., East Lansing (United States))

    1993-05-15

    The capacity to form flower buds in thin-layer explants was studied in Nicotiana of several species, cultivars, and lines of differing in their response to photoperiod. This capacity was found in all biotypes examined and could extend into sepals and corolla. It varied depending on genotype, source tissue and its developmental state, and composition of the culture medium, particularly the levels of glucose, auxin, and cytokinin. It was greatest in the two day-neutral plants examined, Samsun tobacco and Nicotiana rustica, where it extended from the inflorescence region down the vegetative stem, in a basipetally decreasing gradient; it was least in the two qualitative photoperiodic plants studied, the long-day plant Nicotiana silvestris and the short-day plant Maryland Mammoth tobacco, the quantitative long-day plant Nicotiana alata and the quantitative short-day plant Nicotiana otophora line 38-G-81, where it was limited to the pedicels (and, in some cases, the sepals). Regardless of the photoperiodic response of the source plants, the response was the same in explants cultured under long and short days. The capacity to form flow buds in explants is present in all Nicotiana biotypes studied supports the idea that it is regulated by the same mechanism(s), regardless of the plant's photoperiodic character. However, flower formation in the explants is not identical with de novo flower formation in a hitherto vegetative plant: it is rather the expression of a floral state already established in the plant, although it can vary widely in extent and spatial distribution. Culture conditions that permit flower-bud formation in an explant are conditions that maintain the floral state and encourage its expression; conditions under which no flower buds are formed reduce this state and/or prevent its expression. 14 refs., 5 figs., 3 tabs.

  6. Distinguishing suitable biotypes of Dactylopius tomentosus (Hemiptera: Dactylopiidae) for biological control of Cylindropuntia fulgida var. fulgida (Caryophyllales: Cactaceae) in South Africa.

    Science.gov (United States)

    Mathenge, C W; Holford, P; Hoffmann, J H; Zimmermann, H G; Spooner-Hart, R; Beattie, G A C

    2009-12-01

    Cylindropuntia fulgida (Engelmann) F.M. Knuth var. fulgida (Engelmann) F.M. Knuth (Cff) (Caryophyllales: Cactaceae) is native to Mexico and Arizona and was introduced into South Africa for ornamental purposes. It subsequently became highly invasive, necessitating control. The cochineal insect, Dactylopius tomentosus (Lamarck) (Hemiptera: Dactylopiidae), was selected as a potential biological control agent based on its restricted host range among Cylindropuntia species and previous success in controlling C. imbricata (DC.) F. Knuth (Ci). Eight D. tomentosus provenances (Cholla, Cholla E, Fulgida, Mamillata, Imbricata, Tunicata U, Tunicata V and Rosea) from Cylindropuntia species in their native ranges were reared on Cff, whilst Cholla and Imbricata were also reared on Ci. Large differences were found in the development and survival of crawlers, and in the reproductive capacity of females. Three subjective categories of provenance interaction with host plants were identified based on a fitness index (FI) calculated from data relating to crawler survival, female development time and fecundity: (i) thriving (FI > or = 1) - insects had shorter developmental times, high crawler survival and highly fecund females (Cholla); (ii) surviving (FI0) - insects had extended development times, low crawler survival and low fecundity (Imbricata, Fulgida and Mamillata); and (iii) dying (FI = 0) - insects died before or at the second instar (Rosea, Tunicata U and Tunicata V). Cholla, therefore, is highly suitable for biological control of Cff in South Africa. In addition, Cholla thrived on Cff but only survived on Ci whilst, in contrast, Imbricata thrived on Ci but only survived on Cff. This differential ability of provenances to thrive or survive on different host plants demonstrated that host adapted biotypes of D. tomentosus exist; therefore, biotypes should be taken into account when considering this species as a biological control agent of cactus weeds. PMID:19302723

  7. Glyphosate no controle de biótipos de azevém e impacto na microbiota do solo Glyphosate application for italian ryegrass biotype control and impact on soil microbiota

    Directory of Open Access Journals (Sweden)

    E.A. Ferreira

    2006-09-01

    Full Text Available Avaliou-se neste trabalho a resistência de azevém (L. multiflorum ao glyphosate e o impacto do controle desses biótipos sobre a respiração e biomassa microbiana do solo. Foram conduzidos dois ensaios: no primeiro foram avaliadas a intoxicação e a massa seca das plantas de biótipos de três populações de azevém: população 1 (reconhecidamente resistente, população 2 (resistência intermediária, e população 3 (sensível ao glyphosate, submetidas a diferentes doses de glyphosate (200, 400, 800, 1.600 e 3.200 g ha-1. No segundo ensaio foram avaliados a massa seca da parte aérea, a altura de plantas, o número de folhas de azevém e a respiração e massa microbiana do solo cultivado com os biótipos resistente e sensível, com e sem aplicação de glyphosate (480 g ha-1. Aos 14 DAT, observou-se morte do biótipo sensível quando tratado com doses a partir de 200 g ha-1 de glyphosate. Nos biótipos resistentes e com nível intermediário de resistência, a toxicidade do glyphosate às plantas de azevém foi de 85% na maior dose avaliada. O biótipo resistente apresentou maior produção de massa seca da parte aérea aos 42 DAT e na rebrota, aos 72 DAT, quando comparado ao biótipo intermediário. O biótipo sensível apresentou maior altura de plantas, número de folhas e massa seca da parte aérea, em comparação ao resistente, quando não tratados com o glyphosate. Não foi observada diferença na atividade microbiana do solo entre os tratamentos avaliados.This study aimed to evaluate the resistance Italian ryegrass (L. multiflorum against glyphosate and the impact of the control of these biotypes on soil respiration and microbial biomass. Two essays were conducted: the first evaluated intoxication and dry mass of the plants of biotypes of three Italian ryegrass population (population 1 - resistant; population 2 - intermediary resistance; and population 3 - sensitive to glyphosate submitted to different glyphosate rates. The

  8. Preliminary study of succession of Bemisia tabaci biotypes in Jiangsu Province, China%江苏地区烟粉虱生物型演替研究初报

    Institute of Scientific and Technical Information of China (English)

    沈媛; 杜予州; 任顺祥; 邱宝利

    2011-01-01

    本文连续5年系统监测了江苏省13个地级市烟粉虱Bemisia tabaci(Gennadius)生物型的发生分布状况,探讨了它们的迁移扩散和演替规律.利用RAPD分子标记和mtDNA COI基因序列进行烟粉虱生物型鉴定,结果表明:江苏地区发生的烟粉虱生物型为B型和Q型.自2005年到2009年,B型烟粉虱在苏南和苏北地区的发生分布频率逐年下降,在苏北地区的发生分布频率由52.58%下降为22.22%,在苏南由56.52%下降为9.37%;而Q型烟粉虱在苏南和苏北的发生分布频率逐年升高,在苏北由47.42%上升至77.78%,在苏南由43.48%上升为90.63%.B型烟粉虱的发生分布范围由全省逐渐向苏北地区缩小,而Q型烟粉虱的发生分布范围逐渐扩大遍及全省;此外,Q型烟粉虱在江苏是由苏中和苏南地区向苏北地区扩散,并逐步取代B型烟粉虱成为江苏地区农作物的主要害虫.%The occurrence and distribution of Bemisia tabaci(Gennadius) biotypes in 13 cities in Jiangsu Province was surveyed systematically from 2005 to 2009 and biotypes identified on the basis of RAPD marks and mtDNA COI gene sequence. The results showed that the B. tabaci B and Q biotypes co-exist in Jiangsu Province but that the distribution of the B biotype has decreased while that of the Q biotype has increased. The frequency of the B biotype ranged from 52.58% to 22. 22% in Northern Jiangsu and from 56. 52% to 9. 37% in Southern Jiangsu. The distribution of the Q biotype ranged from 47.42% to 77.78% in Northern Jiangsu and from 43.48% to 90. 63% in Southern Jiangsu. The Q biotype has spread from Southern and Central Jiangsu to Northern Jiangsu and has gradually replaced the B biotype as a major crop pest in Jiangsu Province.

  9. Salmonella typhi: lisotipia VI e biotipificação em amostras oriundas de algumas regiões do Brasil Salmonella typhi: lysotype VI and biotyping in sample from some regions of Brazil

    Directory of Open Access Journals (Sweden)

    Ernesto Hofer

    1984-03-01

    Full Text Available Fez-se uma análise da distribuicão da frequência dos lisotipos VI e dos tipos fermentativos segundo o esquema de Kristensen, em 1.150 amostras de Salmonella typhi, isoladas de diferentes regiões do Brasil (Pará, Pernambuco, Bahia, Minas Gerais, Rio de Janeiro, São Paulo e Rio Grande do Sul. No computo geral, observou-se a prevalência dos lisotipos A (38,1%; Ela (18,9%; amostras VI negativas (16,6%; D6 (8,7% I + IV (4,6%; T (2,3% e C1 (2,1% e a ocorrência de alguns tipos fágicos característicos para determinadas áreas (B3, C4 e 40 na Bahia; E1b, F2, G1 e L1 em São Paulo; E4 e 28 no Rio de Janeiro. Quanto a classificacão bioquímica, 55,2% das amostras caracterizaram-se no biotipo II (xilose e arabinose negativas, 44,2% no tipo fermentativo I (xilose positiva e arabinose negativas e 0,52% no tipo III (xilose e arabinose positivas, respectivamente.The frequency of Vi-phage types and fermentative types according to Kristensen's scheme was studied among 1,150 strains of Salmonella typhi isolated from different areas in Brazil (states of Pará, Pernambuco, Bahia, Minas Gerais, Rio de Janeiro, São Paulo and Rio Grande do Sul. The most prevalent phage types encountered in this study were: A (38.1%; Ela (18.9%, D6 (8.7%, T (2.3% and C1 (2.1%, including categories of untypable strains (group I + IV-4.6%, and Vi negative (16.6%. There was,however, some types characteristics of particular areas (B3, C4, 40 from Bahia; Elb, F2,G1, L1 from São Paulo; E4 and 28 from Rio de Janeiro. In respect to the biochemical classification, 55.2% of the strains were classified as a biotype II (xylose and arabinose negative, 44,2% as of type I (xylose positive and negative0 and 0.52% as a type III (xylose and arabinose positive, respectively.

  10. Identification of Haemophilus influenzae Type b Isolates by Use of Matrix-Assisted Laser Desorption Ionization–Time of Flight Mass Spectrometry

    Science.gov (United States)

    Månsson, Viktor; Kostrzewa, Markus; Nilson, Bo; Riesbeck, Kristian

    2015-01-01

    Haemophilus influenzae type b (Hib) is, in contrast to non-type b H. influenzae, associated with severe invasive disease, such as meningitis and epiglottitis, in small children. To date, accurate H. influenzae capsule typing requires PCR, a time-consuming and cumbersome method. Matrix-assisted laser desorption ionization–time of flight mass spectrometry (MALDI-TOF MS) provides rapid bacterial diagnostics and is increasingly used in clinical microbiology laboratories. Here, MALDI-TOF MS was evaluated as a novel approach to separate Hib from other H. influenzae. PCR-verified Hib and non-Hib reference isolates were selected based on genetic and spectral characteristics. Mass spectra of reference isolates were acquired and used to generate different classification algorithms for Hib/non-Hib differentiation using both ClinProTools and the MALDI Biotyper software. A test series of mass spectra from 33 Hib and 77 non-Hib isolates, all characterized by PCR, was used to evaluate the algorithms. Several algorithms yielded good results, but the two best were a ClinProTools model based on 22 separating peaks and subtyping main spectra (MSPs) using MALDI Biotyper. The ClinProTools model had a sensitivity of 100% and a specificity of 99%, and the results were 98% reproducible using a different MALDI-TOF MS instrument. The Biotyper subtyping MSPs had a sensitivity of 97%, a specificity of 100%, and 93% reproducibility. Our results suggest that it is possible to use MALDI-TOF MS to differentiate Hib from other H. influenzae. This is a promising method for rapidly identifying Hib in unvaccinated populations and for the screening and surveillance of Hib carriage in vaccinated populations. PMID:25926500

  11. Reduced Susceptibility to Rifampicin and Resistance to Multiple Antimicrobial Agents among Brucella abortus Isolates from Cattle in Brazil

    Science.gov (United States)

    Barbosa Pauletti, Rebeca; Reinato Stynen, Ana Paula; Pinto da Silva Mol, Juliana; Seles Dorneles, Elaine Maria; Alves, Telma Maria; de Sousa Moura Souto, Monalisa; Minharro, Silvia; Heinemann, Marcos Bryan; Lage, Andrey Pereira

    2015-01-01

    This study aimed to determine the susceptibility profile of Brazilian Brucella abortus isolates from cattle to eight antimicrobial agents that are recommended for the treatment of human brucellosis and to correlate the susceptibility patterns with origin, biotype and MLVA16-genotype of the strains. Screening of 147 B. abortus strains showed 100% sensitivity to doxycycline and ofloxacin, one (0.68%) strain resistant to ciprofloxacin, two strains (1.36%) resistant to streptomycin, two strains (1.36%) resistant to trimethoprim-sulfamethoxazole and five strains (3.40%) resistant to gentamicin. For rifampicin, three strains (2.04%) were resistant and 54 strains (36.73%) showed reduced sensitivity. Two strains were considered multidrug resistant. In conclusion, the majority of B. abortus strains isolated from cattle in Brazil were sensitive to the antimicrobials commonly used for the treatment of human brucellosis; however, a considerable proportion of strains showed reduced susceptibility to rifampicin and two strains were considered multidrug resistant. Moreover, there was no correlation among the drug susceptibility pattern, origin, biotype and MLVA16-genotypes of these strains. PMID:26181775

  12. 牙周生物型对前牙美学区口腔治疗影响的研究进展%Advances of the effects of periodontal biotype on oral therapy in anterior dental aesthetic area

    Institute of Scientific and Technical Information of China (English)

    陈晨; 孙颖

    2016-01-01

    Periodontal biotype is very important for oral therapy, especially in anterior dental aesthetic area. It is related with period-ontology, implantology, prosthodontics, orthodontics and so on, and has attracted attentions from more and more researchers and clini-cians. This paper reviewed the classifications, characteristics, measurement methods and effects of periodontal biotype on oral therapy in anterior dental aesthetic area.%牙周生物型对口腔治疗,尤其是前牙美学区治疗具有重要意义,涉及牙周、种植、修复、正畸等多个临床领域,近年来已受到越来越多学者的关注.该文拟就牙周生物型的分型、特点、常用测量方法 及对前牙美学区治疗的影响作一综述.

  13. Resistência ao glyphosate em biótipos de buva (Conyza spp. das regiões oeste e sudoeste do Paraná Resistance to glyphosate in Conyza spp. biotypes in western and southwestern Parana, Brazil

    Directory of Open Access Journals (Sweden)

    M.M Trezzi

    2011-01-01

    Full Text Available A resistência ao glyphosate em biótipos de Conyza spp. em áreas de lavoura das regiões oeste e sudoeste do Paraná causa grandes dificuldades ao manejo e, consequentemente, problemas econômicos e ambientais. Este experimento objetivou determinar a existência de resistência ao herbicida glyphosate em biótipos de buva (Conyza spp. suspeitos, coletados em lavouras das regiões oeste e sudoeste do Paraná, comparando-os com biótipos suscetíveis. O delineamento experimental utilizado foi inteiramente casualizado, em esquema fatorial 12 x 8 x 3. Os fatores consistiram de 12 biótipos de buva, doses de glyphosate (0, 100, 180, 324, 583, 1.050, 1.888 e 3.345 g ha-1 e épocas de avaliação para a variável controle (7, 14 e 21 dias após a aplicação. Para as variáveis matéria verde e matéria seca, o esquema fatorial utilizado foi o 12 x 8. As variáveis avaliadas foram controle visual, matéria verde, matéria seca, C50, GR50 e fator de resistência. A dose de 3.345 g glyphosate ha-1 foi a que apresentou maior nível de controle dos biótipos, porém o controle dos biótipos suspeitos não foi efetivo, necessitando de doses mais altas. Todos os biótipos de buva suspeitos de resistência ao glyphosate tiveram essa característica confirmada. Entretanto, constatou-se grande amplitude de fatores de resistência, o que caracteriza a variabilidade entre os biótipos resistentes. Essas informações poderão ser utilizadas no planejamento de estratégias de manejo das populações resistentes e na prevenção da ocorrência de novas áreas com buva resistente ao glyphosate.Glyphosate-resistant biotypes of Conyza spp. (hairy fleabane, horseweed in crop areas in the western and southwestern regions of the state of Paraná, Brazil, cause great management, economic, and environmental problems. This experiment aimed to determine the existence of horseweed biotypes resistant to glyphosate in the suspected populations collected from farms in western

  14. Crescimento diferencial de biótipos de Conyza SPP. resistente e suscetível ao herbicida glifosato Differential growth of glyphosate-resistant and susceptible biotypes of Conyza SPP

    Directory of Open Access Journals (Sweden)

    Murilo Sala Moreira

    2010-01-01

    Full Text Available Este trabalho foi realizado com o objetivo de comparar, em condição controlada e não-competitiva, o crescimento de biótipos de Conyza canadensis e C. bonariensis resistente e suscetível ao herbicida glifosato, a fim de quantificar os efeitos da pressão de seleção para resistência nos biótipos. Dois experimentos foram desenvolvidos com tratamentos organizados em esquema fatorial 9 x 2, com nove avaliações periódicas de crescimento e dois biótipos de cada espécie. As variáveis avaliadas por planta foram: área foliar; massa seca da parte aérea, das raízes e total, obtendo-se, a partir desta última, a taxa de crescimento absoluto. O biótipo de C. canadensis resistente ao glifosato possui crescimento mais lento, menor acúmulo de área foliar e de massa seca que o biótipo suscetível. Menores áreas foliar e massa seca também foram registradas para o biótipo de C. bonariensis resistente ao glifosato quando comparado ao suscetível, porém com diferenças mais sutis que aquelas constatadas para C. canadensis. O crescimento absoluto do biótipo suscetível foi superior ao do resistente em ambas as espécies. A pressão de seleção para resistência ao glifosato teve impactos negativos na habilidade de crescimento dos biótipos.This work was carried out with the objective of comparing, under controlled and non-competitive condition, the growth of glyphosate-resistant and susceptible biotypes of Conyza canadensis and C. bonariensis; to quantify the effects of resistance selection pressure on the biotypes. Two trials were developed with treatments organized according to a factorial scheme 9 x 2, where nine were periodical growth evaluations and two were biotypes of each species. The variables evaluated per plant were: leaf area and dry mass (shoot, root and total; to determine absolute growth rate from the total dry mass. The glyphosate-resistant biotype of C. canadensis exhibits slower growth and smaller accumulation of leaf area

  15. Genotyping of Clostridium perfringens isolated from healthy and diseased ostriches (Struthio camelus.

    Directory of Open Access Journals (Sweden)

    Jamshid Razmyar

    2014-02-01

    Full Text Available Clostridium perfringens is more prevalent type of clostridia genus isolated from the intestinal tract of ostrich (Struthio camelus. Necrotic enteritis (NE is a potentially fatal gastrointestinal (GI disease of poultry and other avian species, which produces marked destruction of intestinal lining in digestive tract caused by C. perfringens. Pathogenicity and lesions are correlated with the toxins produced, thus toxin typing of the bacterium has diagnostic and epidemiological significance. The aims of the present study were to determine the biotypes of C. perfringens among ostrich's farms either diseased and healthy ones and to screen the isolates for major toxin genes (cpa, cpb, etx, and iA, cpb2, and cpe.Thirty isolates of C. perfringens were obtained from NE-positive and NE-negative ostrich flocks in Khorasan-e-Razavi porvince and analyzed by multiplex PCR assay.All isolates were positive for alpha toxin gene (cpa and five of those were positive for beta toxin gene (cpb. The presence of cpb2 gene was detected in a high percentage of isolates originating from both healthy (93.3% and diseased flocks (80%. None of the isolate carried enterotoxin gene (cpe.The results suggest that types A and C of C. perfringens are the most prevalent types in ostrich in Iran. Due to detection of beta2 toxin gene in isolates from both healthy and diseased birds, it appears that the presence of cpb2 is not considered a risk by itself.

  16. MALDI-TOF mass spectrometry proteomic based identification of clinical bacterial isolates

    Directory of Open Access Journals (Sweden)

    Ashutosh Panda

    2014-01-01

    Full Text Available Background & objectives: Pathogenic bacteria often cause life threatening infections especially in immunocompromised individuals. Therefore, rapid and reliable species identification is essential for a successful treatment and disease management. We evaluated a rapid, proteomic based technique for identification of clinical bacterial isolates by protein profiling using matrix-assisted laser desorption-ionization time - of - flight mass spectrometry (MALDI-TOF MS. Methods: Freshly grown bacterial isolates were selected from culture plates. Ethanol/formic acid extraction procedure was carried out, followed by charging of MALDI target plate with the extract and overlaying with α-cyano-4 hydroxy-cinnamic acid matrix solution. Identification was performed using the MALDI BioTyper 1.1, software for microbial identification (Bruker Daltonik GmbH, Bremen, Germany. Results: A comparative analysis of 82 clinical bacterial isolates using MALDI -TOF MS and conventional techniques was carried out. Amongst the clinical isolates, the accuracy at the species level for clinical isolates was 98.78%. One out of 82 isolates was not in accordance with the conventional assays because MALDI-TOF MS established it as Streptococcus pneumoniae and conventional methods as Streptococcus viridans. Interpretation & conclusions: MALDI - TOF MS was found to be an accurate, rapid, cost-effective and robust system for identification of clinical bacterial isolates. This innovative approach holds promise for earlier therapeutic intervention leading to better patient care.

  17. 随州地区阴道加德纳菌生物型分布及药敏结果分析%Biotype distribution and drug sensitivity of gardnerella vaginalis in suizhou

    Institute of Scientific and Technical Information of China (English)

    谢明水; 刘杨; 李玲

    2011-01-01

    OBJECTIVE To observe the current situation of infection and biotypes of Gardnerella vaginalis in suizhou area. METHODS Gardnerella vaginalis strains were isolated and cultured from vaginal secretions of Obstetrics and gynecology patients, either inpatients or outpatients. The isolated strains were typed by Piot. Susceptibility test was performed by K-B method. RESULTS The overall detection rate of GV in 326 patients suffered vaginopathy was 35.9%, all types were detected with the exception of 7 types. The sensitivity of ciprofloxacin, gentamycin,ampicillin, cefazolin, cefuroxime, cefotaxime, cefepime, azithromycin, arilin, SMZ-TMP, tazocin, and sulperazonewere49.6%, 21.4%, 35.0%, 56.4%, 66.7%, 59.0%, 87.2%, 54.7%, 46.2%,84.6%, 96.6%and 86.3% respectively. CONCLUSION The majority of types of GV isolated from BV suffers in the suizhou area are type 1,5,6 which are comparatively susceptive to cefepime, SMZ-TMP, tazocin, and sulperazone while are more resistant to ampicillin, arilin and aminoglycosides antibacterials.%目的 了解随州地区阴道加德纳菌(GV)的感染情况及生物型分布情况,分析药敏结果 为临床提供有价值的参考依据. 方法 对妇产科门诊和住院患者的宫颈或阴道分泌物进行分离培养,对分离的菌株进行鉴定并采用Piot分型法分型,再采用K-B法检测抗菌药物敏感性. 结果 326例细菌性阴道病(BV)患者GV的总检出率为35.9%,除7型外其余各型均检测到;GV对环丙沙星、庆大霉素、氨苄西林、头孢唑林、头孢呋辛、头孢噻肟、头孢吡肟、阿奇霉素、甲硝唑、磺胺甲噁唑/甲氧苄啶、哌拉西林/他唑巴坦、头孢哌酮/舒巴坦的敏感率分别为49.6%、21.4%、35.0%、56.4%、66.7%、59.0%、87.2%、54.7%、46.2%、84.6%、96.6%、86.3%. 结论 随州地区BV患者分离出的GV主要为1、5、6型,对头孢吡肟、磺胺甲噁唑/甲氧苄啶以及哌拉西林/他唑巴坦、头孢哌酮/舒巴坦有

  18. USING RAPD-PCR TO DISTINGUISH BIOTYPES OF BEMISIA TABACI ( HOMOPTERA: ALEYRODIDAE) IN CHINA%RAPD方法用于区分中国烟粉虱的生物型

    Institute of Scientific and Technical Information of China (English)

    吴杏霞; 胡敦孝; 李正西; 沈佐锐

    2002-01-01

    应用RAPD-PCR技术研究了中国大陆10个烟粉虱种群的生物型情况.聚类分析表明:这10个种群中包含了3种生物型:烟粉虱B型、广西型(南宁南瓜寄主)和福建型(福州地瓜).值得注意的是,在福建并存着两种烟粉虱生物型,即甘蓝上的B型烟粉虱和甘薯上的福建福州型.研究表明烟粉虱B型已经传入中国,至少在北京、山东、新疆、福建、广东等地都有发生和分布.广西型和福建型是否中国的本土种群还需进一步研究.%Ten populations of the whitefly Bemisia tabaci (Gennadius) collected from eight fieed and ornamentalcrops from seven provinces/cities in China were determined using RAPD-PCR. Results showed that the 10 populations ofB. tabaci could be classified into three distinct groups: a Biotype B group, a Guangxi group, and a Fujian group. Thewhiteflies in the Biotype B group were collected from sweetpotato and cotton in Beijing, tomato in Shandong, poinsettiain Shanghai and Guangdong, cabbage in Fujian, and hemp and eggplant in Xinjiang. The Guangxi group were collectedfrom pumpkin in Nanning, Guangxi, and the Fujian group, from sweetpotato in Fujian. It was notable that B. tabacispecimens collected on cabbage in Fujian belonged to the Biotype B group. It is clear that Biotype B does now occur inChina, in Beijing, Shandong, Xinjiang, Shanghai, Fujian and Guangdong. It is likely that the Guangxi and Fujiangroups are native to China.

  19. Use of Monoclonal Antibodies for the Identification of Leishmania spp. Isolated from Humans and Wild Rodents in the State of Campeche, Mexico

    Directory of Open Access Journals (Sweden)

    Silvia B CantoLara

    1999-05-01

    Full Text Available The genus Leishmania includes 30 described species which infect a wide variety of mammalian hosts. The precise identification of leishmanial parasites at the species level is very important in order to determine whether an organism, causing the disease in a given area, is of the same biotype as that found in suspected mammalian reservoirs. The objectives of the present study were (1 to identify leishmanial parasites isolated from humans and wild rodents from the State of Campeche, an endemic focus of localized cutaneous leishmaniasis (LCL in southern Mexico, using an indirect immunofluorescent assay (IFA with monoclonal antibodies (Mabs; and (2 to determine if the parasites of the two types of hosts were of the same biotype. All the wild rodents (six Ototylomys phyllotis, eight Oryzomys melanotis, five Peromyscus yucatanicus and two Sigmodon hispidus and 96% (24/25 of the human isolates were identified as Leishmania (L. mexicana confirming that this specific LCL focus is a wild zoonosis. The presence of one human isolate of L. (Viannia braziliensis in the State of Campeche, confirmed the importance of an accurate taxonomic identification at species level.

  20. Potencial competitivo de biótipos de azevém (Lolium multiflorum Competitive potential of ryegras (Lolium multiflorum biotypes

    Directory of Open Access Journals (Sweden)

    E.A. Ferreira

    2008-06-01

    Full Text Available Objetivou-se com este trabalho avaliar a capacidade competitiva entre biótipos de azevém resistente e suscetível ao glyphosate, bem como a interferência deles, em diferentes densidades, sobre o crescimento de plantas de trigo. No momento da colheita, aos 50 dias após a emergência do azevém, avaliaram-se o número de perfilhos, a altura de plantas e a área foliar. Nessa mesma ocasião, coletou-se a parte aérea e as raízes das plantas de trigo e de azevém resistente e suscetível, determinando-se a seguir a massa seca desse material em partes separadas (raiz, caule e folhas. Com base nos dados avaliados, as seguintes variáveis para o trigo e para os biótipos de azevém foram calculadas: taxa de crescimento da cultura (TCC = MS A/Ndias, em que MS A é a massa seca da parte aérea e Ndias é o período em dias entre a emergência e a colheita das plantas; área foliar específica (SLA = Af/MSf, em que Af é a área foliar e MSf é a massa seca foliar; e o índice de área (IAF = Af/St, sendo St a superfície de solo, indicando qual a área de folhas por m² de solo. As características avaliadas altura de planta, massa seca e área foliar dos biótipos de azevém suscetível apresentaram menor tendência de redução e maior plasticidade fenotípica, com o incremento da densidade de plantas por área em relação aos biótipos resistentes. Com relação à competição dos biótipos de azevém com plantas de trigo, efeito negativo sobre a cultura também foi observado quando esta se encontrava sob interferência do biótipo suscetível. Conclui-se que o biótipo suscetível de azevém é mais competitivo que o resistente.The objective of this work was to evaluate the competitiveness of ryegrass biotypes resistant and susceptible to glyphosate, as well as their interference in wheat growth at different densities. At harvesting, 50 days after emergence, tillering, height, and leaf area of ryegrass plants were evaluated and shoot and roots

  1. Diuraphis noxia (Hemiptera: Aphididae: Identificación de los biotipos presentes en poblaciones argentinas Diuraphis noxia (Hemiptera: Aphididae: Identification of biotypes present in populations of Argentina

    Directory of Open Access Journals (Sweden)

    Mónica Ricci

    2012-06-01

    Full Text Available El objetivo del trabajo fue evaluar el comportamiento de líneas de trigo y cultivares diferenciales, portadores de genes de resistencia, a fin de determinar la composición biotípica del áfido Diuraphis noxia Kurdjumov, "Pulgón Ruso del Trigo" (PRT, en Argentina; y se identifican aquellos hospederos con resistencia genética al PRT. Los 18 cultivares diferenciales y líneas Novel, se sembraron en invernáculo, en un diseño aleatorio con 2 repeticiones. Las observaciones se realizaron a los 21 y 51 días de la infestación, se determinó el grado de clorosis y de enrollamiento foliar. Los resultados se analizaron con ANOVA y el Test de Tuckey (a=0,05. A los 21 días, las líneas 14 y 1 (Noveles presentaron el mejor comportamiento, pero se desconocen sus genes de resistencia. Los cultivares portadores de Dn2 y Dn7 resultaron con un alto nivel de tolerancia, mientras que Dn1 y dn3 fueron moderadamente tolerantes y las portadoras de Dn4 y Dn5, muy dañados por las poblaciones Argentinas de PRT. A los 51 días, solo Dn7 y las líneas 14 y 1 mantuvieron un comportamiento de tolerancia al áfido. Se infiere que en el país se encontrarían los biotipos 1, 2* y 5*, estos dos últimos con características diferentes a los identificados en EE.UU. Se concluye que los cultivares mejorados en otros países, pueden comportarse como susceptibles frente a las poblaciones locales.The aim of the current research was to assess the plant responses of wheat lines and differential cultivars carrying Diuraphis noxia Kurdjumov resistance genes when subjected to aphid infestation, in order to determine the biotypic composition of RWA populations in Argentina. Eighteen lines and differential cultivars were sown in a greenhouse in a randomized design with two replicates. Two recordings of the chlorotic damage and the level of leaf rolling were made after 21 and 51 days from the infestation onset. The results were analyzed with an ANOVA and Tuckey Test (a=0.05. After

  2. Isolated dextrogastria

    Energy Technology Data Exchange (ETDEWEB)

    Cha, Kyung Soo; Kim, Soo Ryun; Lee, Yong Chul; Park, Soo Soung [Chung Ang University College of Medicine, Seoul (Korea, Republic of); Sim, Young Soo [Seoul National University College of Medicine, Seoul (Korea, Republic of)

    1982-06-15

    Isolated situs inversus of the stomach with otherwise normal position of the thoracic and abdominal viscera is an extremely rare anomaly occurring in two district forms. Majority of cases are associated with eventration of the diphragm and are reported as being confused with spontaneous pneumothorax or pyopneumothorax at base of the right lung. The right sided stomach may produce interesting and confusing changes in liver scan. We have experienced 2 cases of the isolated dextrogastria.

  3. Isolated dextrogastria

    International Nuclear Information System (INIS)

    Isolated situs inversus of the stomach with otherwise normal position of the thoracic and abdominal viscera is an extremely rare anomaly occurring in two district forms. Majority of cases are associated with eventration of the diphragm and are reported as being confused with spontaneous pneumothorax or pyopneumothorax at base of the right lung. The right sided stomach may produce interesting and confusing changes in liver scan. We have experienced 2 cases of the isolated dextrogastria

  4. Control effects and toxicities of six insecticides against Bemisia tabaci Q biotype%6种杀虫剂对Q型烟粉虱的田间防治效果及抗性测定

    Institute of Scientific and Technical Information of China (English)

    边海霞; 穆常青; 郭晓军; 罗晨; 郅军锐

    2011-01-01

    Impacts of six common insecticides on Bemisia tabaci Q-biotype in field efficiency trials and bioassays were tested with cucumber. The results showed that the corrected mortality of Q-biotype whiteflies was 78. 8% three days after abamectin was used. The corrected mortality by oxymatrine ? Prosuler was 65.1%, and the others were less than 45%. The mortality gradually decreased and had no significant differences between different insecticides tested after seven days. Compared with the B-biotype whitefly, Q-biotype developed higher resistance level to abamectin, matrine, acetamiprid, imidacloprid, oxymatrine ? Prosuler and cypermethrin. Attention should be paid to selecting appropriate pesticides to prevent Q-Biotype whiteflies on cucumber. The six insecticides used at present induced different levels of resistance.%本文测试了6种常用杀虫剂对黄瓜上Q型烟粉虱的田间防治效果,并进行室内毒力测定,以确定Q型烟粉虱对不同药剂的抗性.结果表明,施药后第3天,阿维菌素防治效果达78.8%,其次为苦参·内酯,防效达65.1%,其他药剂防效低于45%;施药7d后,6种供试杀虫剂防效均下降到45%以下,且药剂间的差异不显著.毒力测定显示,Q型烟粉虱对6种常用杀虫剂均产生不同程度的抗性,且抗性水平高于B型.其中,Q型对高效氯氰菊酯抗性(抗性倍数47.69)显著高于B型(抗性倍数7.19);对阿维菌素抗性则相对较低,抗性指数仅为4.40;对苦参碱、啶虫脒和吡虫啉的抗性居中(抗性倍数4.57~9.44).

  5. Aspectos morfofisiológicos de biótipos de azevém (Lolium multiflorum sensíveis e resistentes ao glyphosate Morphophysiological aspects of ryegrass biotypes (Lolium multiflorum sensitive and resistant to glyphosate

    Directory of Open Access Journals (Sweden)

    J Galvan

    2011-01-01

    Full Text Available O azevém é uma gramínea com elevado potencial de infestação em lavouras e pomares, e seu controle com glyphosate tem sido limitado devido à existência de biótipos resistentes a esse herbicida. Objetivou-se comparar quatro biótipos de azevém coletados em diferentes regiões do Rio Grande do Sul, com o intuito de testar a hipótese de que aspectos morfofisiológicos e fenológicos estejam vinculados à resistência. O experimento foi conduzido em casa de vegetação, onde um biótipo suscetível (B1S, Passo Fundo e três resistentes ao glyphosate (B2R, Santa Maria; B3R, Júlio de Castilhos; e B4R, Vacaria foram colhidos aos 126, 147, 168 e 189 dias de idade. O biótipo B1S mostrou 21 dias de antecipação no florescimento em relação aos demais biótipos. O biótipo B4R produziu significativamente mais folhas (43 por planta, afilhos (14 por planta, espigas (14 por planta, sementes (3.484 por planta e matéria seca total (raízes + parte aérea = 13,8 g por planta. Conclui-se que biótipos sensíveis não podem ser diferidos de biótipos resistentes apenas por aspectos morfológicos relacionados ao vigor.Ryegrass has a high potential for infestation in crops and orchads and its control with glyphosate has been limited due to the existence of herbicide-resistant biotypes. The objective of this work was to compare four ryegrass biotypes collected from different regions in the state of Rio Grande do Sul, Brazil, to test the hypothesis that morphophysiological aspects and phenology are linked to resistance. The experiment was conducted in a greenhouse, where four biotypes, one susceptible (B1S, Passo Fundo and three resistant to glyphosate (B2R, Santa Maria; B3R, Julio de Castillos; B4R, Vacaria were collected at 126, 147, 168 and 189 days of age. Biotype B1S showed 21 days in advance of flowering in relation to the other biotypes. Biotype B4R produced significantly more leaves (43 per plant, tillers (14 per plant, ears (14 per plant, seeds

  6. Suscetibilidade de biótipos de arroz-vermelho e de cultivares de arroz irrigado ao herbicida imazethapyr Susceptibility of red rice biotypes and commercial rice cultivars to imazethapyr

    Directory of Open Access Journals (Sweden)

    S.H.B. Dornelles

    2010-01-01

    Full Text Available Para avaliar a suscetibilidade de biótipos de arroz-vermelho(Oryza sativa e cultivares comerciais de arroz ao herbicida imazethapyr, realizou-se um ensaio em casa de vegetação com cinco biótipos de arroz-vermelho (acessos Santa Maria 5, Pelotas 3, Rio Pardo 1, Manoel Viana 2 e Catuçaba 1, dois cultivares comerciais de arroz: Clearfield® (IRGA 422 CL e Puitá INTA CL e um cultivar convencional (IRGA 417. Utilizou-se a metodologia de curvas de dose-resposta proposta por Seefeldt et al. (1995. A metodologia de curvas de resposta foi gerada a partir dos parâmetros do modelo logístico e dos valores de I50. Os biótipos de arroz-vermelho e os cultivares foram submetidos a seis doses do herbicida imazethapyr (0; 33,12; 66,25; 132,5; 265,0; e 530,0 g i.a. ha-1. As plantas de arroz foram contadas e coletadas no 20º dia após a aplicação dos tratamentos. A análise do percentual de dano foi realizada através de avaliação visual da fitointoxicação (%, massa verde e massa seca das plantas. Analisando as curvas e os resultados da análise da variância, pode-se inferir que os cultivares Clearfield Irga 422 CL e Puitá INTA CL foram significativamente iguais ao biótipo de arroz-vermelho Catuçaba 1, resistindo a doses de imazethapyr superiores à recomendada em campo para o sistema Clearfield®. Os biótipos Manoel Viana 2, Santa Maria 5 e Pelotas 3 agruparam-se com o cultivar convencional IRGA 417, sendo suscetíveis à dose comercial do herbicida. O biótipo Rio Pardo 1 também é resistente ao herbicida imazethapyr, porém menos resistente que o biótipo Catuçaba 1.To evaluate the susceptibility of biotypes of red rice (Oryza sativa and commercial rice cultivars to the herbicide imazethapyr, a greenhouse assay was conducted with five red rice biotypes (accesses Santa Maria 5, Pelotas 3, Rio Pardo 1, 2 and Manoel Viana Catuçaba 1, two commercial rice cultivars: Clearfield ® (Irga CL 422 and CL Puit INTA, and a conventional cultivar (Irga

  7. Monitoring of biotypes and occurrence of Bemisia tabaci in Jiangsu Province, China%江苏地区烟粉虱发生危害及其生物型监测

    Institute of Scientific and Technical Information of China (English)

    蔡力; 许丽丽; 杜以梅; 杜予州

    2015-01-01

    [Objectives] Biotypes Q and B are two of the most prevalent cryptic species of Bemisia tabaci (Gennadius) (Hemiptera: Aleypdidae) and have consequently been the focus of considerable research as this pest has spread rapidly around the world. In an extensive field survey of the B. tabaci complex throughout Jiangsu Province from 2010 to 2013, we investigated the occurrence and distribution of these two whiteflies in Jiangsu Province. [Methods] Microscopic examination was used to detect crop damage caused by B.tabaci, and a rapid test for identifying biotypes was conducted based on the mtCOⅠgene. [Results] Crop damage first increased in 2011 then decreased in 2013. Similarly, damage also first increased then declined in South and North Jiangsu, but in the Central Jiangsu the opposite trend was apparent. Moreover, damage to eggplant, cucumber and pumpkin crops was relatively high. [Conclusion] The results show that the abundance of B. tabaci differs from year to year in different regions and on different hosts. The resultant differences in crop damage have no direct relationship to the population dynamics of the two whitefly biotypes. Although biotype Q has replaced biotype B as the dominant biotype in Jiangsu Province, we still could detect a small, but gradually increasing, proportion of biotype B in southern and northern Jiangsu.%【目的】随着 Q 型和 B 型烟粉虱 Bemisia tabaci (Gennadius)在全世界范围内的传播和入侵,两种入侵烟粉虱的发生危害和种群扩张越来越受到人们的关注。本文对2010—2013年江苏省内烟粉虱的发生危害程度及其生物型的分布进行了全面的调查研究。【方法】应用室内镜检鉴定烟粉虱的发生危害程度,同时结合 mtCOⅠ分子标记快速检测法鉴定烟粉虱的生物型。【结果】从时间来看,烟粉虱的发生危害程度在2011年最严重,而在2013年最低,呈“先上升后下降”的趋势。从不同地区来

  8. Novos acessos de tomateiro resistentes à mosca-branca biótipo B New accessions of tomato resistant to whitefly biotype B

    Directory of Open Access Journals (Sweden)

    Maria Elisa de Sena Fernandes

    2009-11-01

    Full Text Available O objetivo deste trabalho foi selecionar novas fontes de resistência a Bemisia tabaci biótipo B, entre 34 acessos de tomateiro (Lycopersicon esculentum, do Banco de Germoplasma de Hortaliças da UFV. Avaliaram-se os números de adultos, ovos e ninfas por planta, além da densidade de tricomas. Detectaram-se diferenças entre os acessos nas variáveis avaliadas. Os acessos BGH-166, BGH-616, BGH-850, BGH-990, BGH-2102 e BGH-2125 apresentaram menor número de adultos, ovos e ninfas por planta e tiveram menor densidade de tricomas. A resistência dos acessos de tomate à mosca-branca foi associada a uma menor densidade de tricomas.The objective of this work was to evaluate resistance to Bemisia tabaci biotype B in 34 tomato (Lycopersicon esculentum accessions from the Banco de Germoplasma de Hortaliças of UFV. The number of adults, eggs and nymphs per plant besides of trichome density were evaluated. Differences between accessions were found for the evaluated variables. Accessions BGH-166, BGH-616, BGH-850, BGH-990, BGH-2102 and BGH-2125 presented less infestation of adults, eggs and nymphs per plant and showed lower trichome density. The resistance of these tomato accessions to whitefly was associated to a lower trichome density.

  9. 牙龈生物型的特点及其临床意义%Characteristics and Clinical Significance of Gingival Biotypes

    Institute of Scientific and Technical Information of China (English)

    朱妍菲

    2015-01-01

    牙龈生物型(gingival biotype,GB)有薄型及厚型之分,不同的牙龈形态有不同的组织学特征,产生不同的生物学行为.厚龈生物型受外界侵犯后更易牙龈增生,最终形成深牙周袋;薄龈生物型则更易出现牙龈退缩.临床上,牙龈生物型很大程度上影响了牙周治疗、修复、正畸及种植术后的预后效果,尤其是在美学治疗方面,因而备受关注.本文就牙龈生物型的特点及其对于临床治疗的指导意义作一综述.

  10. In vitro isolation and characterization of a calicivirus causing a vesicular disease of the hands and feet.

    Science.gov (United States)

    Smith, A W; Berry, E S; Skilling, D E; Barlough, J E; Poet, S E; Berke, T; Mead, J; Matson, D O

    1998-02-01

    We report that a calicivirus of oceanic origin, San Miguel sea lion virus serotype 5 (SMSV-5), is a human pathogen. This biotype was isolated originally from blisters on the flippers of northern fur seals (Callorhinus ursinus) and replicates readily in primate and human cell lines. It infects a phylogenetically diverse array of hosts (poikilotherms to primates) and induces type-specific neutralizing antibodies in exposed humans. Group antibody against a pooled antigen of SMSV-5 and two other serotypes was also observed in 18% of 300 blood donors from a population in the northwestern United States. The human calicivirus isolate designated SMSV-5 Homosapien-1 (SMSV-5 Hom-1) was recovered from a laboratory worker with systemic illness, including vesicular lesions on all four extremities. We believe this newly described human disease represents a paradigmatic shift in calicivirus disease recognition. PMID:9502467

  11. Characterisation of Brucella abortus strain 19 cultures isolated from vaccinated cattle.

    Science.gov (United States)

    Thomas, E L; Bracewell, C D; Corbel, M J

    1981-01-31

    Thirty-four cultures recovered from material of bovine origin in England, Scotland and Wales were identified unequivocally as Brucella abortus strain 19 (S19). All had the properties of carbon dioxide-independent B abortus biotype 1 strains, were inhibited by penicillin G and thionin blue at standard concentrations and behaved in oxidative metabolism and guinea pig virulence tests as typical S19. Their sensitivity to i-erythritol varied somewhat between cultures as did reference subcultures of S19. Of the total number of isolates, 11 were recovered from abortion material or cyetic products, 10 were from calves which died from a hypersensitivity reaction within 24 hours of S19 vaccination and the remainder were from milk or internal organs. From the evidence available, there is little to suggest that calfhood vaccination with S19 has resulted in persistent systemic infection in other than a very small proportion of the animals inoculated. PMID:6789543

  12. Isoler nu

    DEFF Research Database (Denmark)

    Andersen, N.E.; Ankerstjerne, P.; Jørgensen, B.;

    Omfattende vejledning, der angiver, hvordan energiforbruget i eksisterende huse kan nedbringes ved isolering, tætning og forbedring af varmeanlægget, og hvor meget det koster. Anvisningen indeholder detaljerede eksempler på efterisolering af ydervægge, tage, gulve og vinduer. Henvender sig til ej...

  13. Matrix-assisted laser desorption ionization-time of flight mass spectrometry based identification of Edwardsiella ictaluri isolated from Vietnamese striped catfish (Pangasius hypothalamus)

    Science.gov (United States)

    Nhu, Truong Quynh; Park, Seong Bin; Kim, Si Won; Lee, Jung Seok; Im, Se Pyeong; Lazarte, Jassy Mary S.; Seo, Jong Pyo; Lee, Woo-Jai; Kim, Jae Sung

    2016-01-01

    Edwardsiella (E.) ictaluri is a major bacterial pathogen that affects commercially farmed striped catfish (Pangasius hypothalamus) in Vietnam. In a previous study, 19 strains of E. ictaluri collected from striped catfish were biochemically identified with an API-20E system. Here, the same 19 strains were used to assess the ability of matrix-assisted laser desorption ionization-time of flight mass spectrometry (MALDI-TOF MS; applied using a MALDI Biotyper) to conduct rapid, easy and accurate identification of E. ictaluri. MALDI-TOF MS could directly detect the specific peptide patterns of cultured E. ictaluri colonies with high (> 2.0, indicating species-level identification) scores. MALDI Biotyper 3.0 software revealed that all of the strains examined in this study possessed highly similar peptide peak patterns. In addition, electrophoresis (SDS-PAGE) and subsequent immuno-blotting using a specific chicken antibody (IgY) against E. ictaluri revealed that the isolates had highly similar protein profiles and antigenic banding profiles. The results of this study suggest that E. ictaluri isolated from striped catfish in Vietnam have homologous protein compositions. This is important, because it indicates that MALDI-TOF MS analysis could potentially outperform the conventional methods of identifying E. ictaluri. PMID:26726022

  14. Characterization of Staphylococcus aureus Isolated from Clinical Specimens by Matrix Assisted Laser Desorption/Ionization Time-of-flight Mass Spectrometry

    Institute of Scientific and Technical Information of China (English)

    WANG Ye Ru; CHEN Qian; CUI Sheng Hui; LI Feng Qin

    2013-01-01

    Objective To develop a matrix assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF-MS) approach to identify Staphylococcus aureus (S. aureus) and differentiate methicillin-resistant S. aureus (MRSA) from methicillin-sensitive S. aureus (MSSA). Methods A total of 100 S. aureus strains isolated from clinical specimens and farm workers were collected and analyzed by MALDI-TOF-MS. And data obtained were interpreted with biotyper software. Results Ninety-two strains were identified by MALDI-TOF-MS as S. aureus at a level of secure genus and probable species, and 4 strains were identified at probable genus after their cultivation, spectral collection and data preprocessing. One strain was identified as S. aureus with lower score. It was revealed that identification of S. aureus by MALDI-TOF-MS was highly correlated with typing by biochemical and serological methods with an accuracy as high as 97%. The biotyper cluster analysis showed that 100 isolates were divided into 2 types at the distance level of 400. Higher peak intensity in the mass of both 3784 Da and 5700 Da was observed in MRSA, whereas that was absent from MSSA. Conclusion MALDI-TOF-MS is considered as a simple, rapid and highly reproducible technique with high-throughput and accuracy for the identification of S. aureus and it can reliably differentiate MRSA from MSSA.

  15. Potential Role of Yeast Strains Isolated from Grapes in the Production of Taurasi DOCG

    Science.gov (United States)

    Aponte, Maria; Blaiotta, Giuseppe

    2016-01-01

    Twelve samples of Aglianico grapes, collected in different locations of the Taurasi DOCG (Appellation of Controlled and Guaranteed Origin) production area were naturally fermented in sterile containers at room temperature. A total of 70 yeast cultures were isolated from countable WL agar plates: 52 in the middle of the fermentation and 18 at the end. On the basis of ITS-RFLP analysis and ITS sequencing, all cultures collected at the end of fermentations were identified as Saccharomyces (S.) cerevisiae; while, the 52 isolates, collected after 1 week, could be referred to the following species: Metschnikowia (M.) pulcherrima; Starmerella (Star.) bacillaris; Pichia (P.) kudriavzevii; Lachancea (L.) thermotolerans; Hanseniaspora (H.) uvarum; Pseudozyma (Pseud.) aphidis; S. cerevisiae. By means of Interdelta analysis, 18 different biotypes of S. cerevisiae were retrieved. All strains were characterized for ethanol production, SO2 resistance, H2S development, β-glucosidasic, esterasic and antagonistic activities. Fermentation abilities of selected strains were evaluated in micro-fermentations on Aglianico must. Within non-Saccharomyces species, some cultures showed features of technological interest. Antagonistic activity was expressed by some strains of M. pulcherrima, L. thermotolerans, P. kudriavzevii, and S. cerevisiae. Strains of M. pulcherrima showed the highest β-glucosidase activity and proved to be able to produce high concentrations of succinic acid. L. thermotolerans produced both succinic and lactic acids. The lowest amount of acetic acid was produced by M. pulcherrima and L. thermotolerans; while the highest content was recorded for H. uvarum. The strain of Star. bacillaris produced the highest amount of glycerol and was able to metabolize all fructose and malic acid. Strains of M. pulcherrima and H. uvarum showed a low fermentation power (about 4%), while, L. thermotolerans, Star. Bacillaris, and P. kudriavzevii of about 10%. Significant differences were

  16. Potential Role of Yeast Strains Isolated from Grapes in the Production of Taurasi DOCG.

    Science.gov (United States)

    Aponte, Maria; Blaiotta, Giuseppe

    2016-01-01

    Twelve samples of Aglianico grapes, collected in different locations of the Taurasi DOCG (Appellation of Controlled and Guaranteed Origin) production area were naturally fermented in sterile containers at room temperature. A total of 70 yeast cultures were isolated from countable WL agar plates: 52 in the middle of the fermentation and 18 at the end. On the basis of ITS-RFLP analysis and ITS sequencing, all cultures collected at the end of fermentations were identified as Saccharomyces (S.) cerevisiae; while, the 52 isolates, collected after 1 week, could be referred to the following species: Metschnikowia (M.) pulcherrima; Starmerella (Star.) bacillaris; Pichia (P.) kudriavzevii; Lachancea (L.) thermotolerans; Hanseniaspora (H.) uvarum; Pseudozyma (Pseud.) aphidis; S. cerevisiae. By means of Interdelta analysis, 18 different biotypes of S. cerevisiae were retrieved. All strains were characterized for ethanol production, SO2 resistance, H2S development, β-glucosidasic, esterasic and antagonistic activities. Fermentation abilities of selected strains were evaluated in micro-fermentations on Aglianico must. Within non-Saccharomyces species, some cultures showed features of technological interest. Antagonistic activity was expressed by some strains of M. pulcherrima, L. thermotolerans, P. kudriavzevii, and S. cerevisiae. Strains of M. pulcherrima showed the highest β-glucosidase activity and proved to be able to produce high concentrations of succinic acid. L. thermotolerans produced both succinic and lactic acids. The lowest amount of acetic acid was produced by M. pulcherrima and L. thermotolerans; while the highest content was recorded for H. uvarum. The strain of Star. bacillaris produced the highest amount of glycerol and was able to metabolize all fructose and malic acid. Strains of M. pulcherrima and H. uvarum showed a low fermentation power (about 4%), while, L. thermotolerans, Star. Bacillaris, and P. kudriavzevii of about 10%. Significant differences were

  17. Apparent seroprevalence, isolation and identification of risk factors for brucellosis among dairy cattle in Goa, India.

    Science.gov (United States)

    Pathak, Ajay D; Dubal, Z B; Karunakaran, M; Doijad, Swapnil P; Raorane, Abhay V; Dhuri, R B; Bale, M A; Chakurkar, Eaknath B; Kalorey, Dewanand R; Kurkure, Nitin V; Barbuddhe, Sukhadeo B

    2016-08-01

    Brucellosis is a highly contagious zoonotic infection affecting livestock and human beings. The disease has been reported worldwide except in few countries where it has been eradicated. The prevalence of brucellosis among cattle from 11 farms having a history of abortions was studied. A total of 481 samples comprising of blood, milk, vaginal swabs, vaginal discharges, placental tissues and fetal tissues were collected from 296 animals. Clinical samples were processed for the isolation of Brucella. Serum samples (n=296) were tested by Rose Bengal Plate Test (RBPT) and indirect ELISA. A total of 90 (30.40%) and 123 (41.55%) samples were positive by RBPT and indirect ELISA, respectively. Also 27.02% samples were positive by both the tests. Brucella isolates (n= 8) were recovered from clinical samples using Brucella selective media. All the isolates demonstrated PCR amplification for the bcsp31 and IS711 genes. Amplification of Brucella abortus specific primer was demonstrated by all the isolates in AMOS PCR indicating isolates to be of either B. abortus biotype 1, 2 or 4. Risk factors for transmission of brucellosis among cattle population were studied by field surveys. It was observed that lack of awareness about brucellosis (OR=8.739, P=0.138) and inadequate floor space (OR=0.278, P=0.128) were crucial risk factors for transmission of bovine brucellosis. PMID:27477501

  18. Eksistentiel Isolation

    OpenAIRE

    Matikainen, Oliver Albert; Andersen, Kian Alexander; Thorup, Johannes Hoff; Slotsager, Christian Knud; Jensen, Mette Ingersholm; Bachmann, Zenia Gruhl; Razga, Pauline Marie

    2015-01-01

    This study examines whether or not isolation can lead to personal growth. In order to answer this question we distinguish between loneliness and aloneness. We explain the theory of existential psychotherapist Irvin D. Yalom and on the basis of this examination, we analyze a conducted interview through the theory. Based on the theory, interview and analysis, we discuss the validity of Yalom’s theory. Considering the examination, the analysis and the distinction between the two types of isolati...

  19. In vitro adhesiveness and biotype of Gardnerella vaginalis strains in relation to the occurrence of clue cells in vaginal discharges.

    Science.gov (United States)

    Scott, T G; Smyth, C J; Keane, C T

    1987-01-01

    Haemagglutination and tissue culture adherence tests using a McCoy cell line were used to examine the adherence characteristics of 105 strains of Gardnerella vaginalis. Each strain represented one isolate per patient. For each patient, a direct smear of vaginal discharge was examined for clue cells. The relation between in vitro adherence and the presence of clue cells was examined. There seemed to be no appreciable relation between the presence of clue cells in smears and the haemagglutinating activity of strains. In contrast, adherence as judged by the McCoy tissue culture system showed a significant relation to the presence of clue cells (p less than 0.001). Though both adhesive characteristics were not inhibited by mannose, the mechanism of haemagglutination of human red cells appeared to differ from that of adherence of tissue culture cells. The findings imply that the clue cell phenomenon is due to attachment of adherent strains of G vaginalis to epithelial cells. Adherent strains of G vaginalis may play a part in the pathogenesis of bacterial vaginosis. Images PMID:3493202

  20. Candida spp. biotypes in the oral cavity of school children from different socioeconomic categories in Piracicaba - SP, Brazil

    Directory of Open Access Journals (Sweden)

    MOREIRA Daniella

    2001-01-01

    Full Text Available Two hundred and thirty-nine (239 Brazilian children, distributed into five distinct socioeconomic categories (A to E were studied. Saliva samples were analyzed as to flow rate, pH, buffer capacity and microbial parameters. The results revealed the presence of Candida spp. in 47.3% of the samples. The most commonly isolated species was C. albicans, in all socioeconomic categories, followed by C. tropicalis, C. krusei and C. parapsilosis. There was no statistical correlation between secretion rate, buffer capacity and Candida spp. CFU/ml. The prevalence of Candida spp. did not differ substantially among the groups; however the microorganisms were more detected in categories B and C. Among all species, C. albicans was the most prevalent. Only 5% of the sample presented more than one species - C. albicans associated with C. tropicalis, C. parapsilosis or C. krusei. It was possible to detect a significant correlation between caries indices and the socioeconomic categories. All categories presented increased caries indices; however the studied population was considered of low caries risk. There was no positive correlation between the presence of Candida and caries risk in the analyzed population.

  1. Toxicities of five insecticides to Bemisia tabaci B-biotype%5种杀虫剂对B型烟粉虱的毒力测定

    Institute of Scientific and Technical Information of China (English)

    胡彧娴; 郑栋辉; 肖志浩; 刘长明

    2012-01-01

    采用浸叶法分别测定了苦参碱、阿维菌素、氯氰菊酯、灭多威和吡虫啉对B型烟粉虱不同虫态的毒力.结果表明:苦参碱对烟粉虱卵的毒力最高,LC50为0.802 mg·L-1,其毒力是吡虫啉的323.8倍;阿维菌素、苦参碱和吡虫啉对1龄和3龄若虫的毒力均较高,但对1龄若虫的毒力高于3龄若虫;阿维菌素和苦参碱对成虫的毒力较高,分别是吡虫啉的111.6和77.4倍;而灭多威和氯氰菊酯对烟粉虱各虫态均表现出较低的毒力.%Toxicities of raatrine, abamectin, cypermethrin, methomyl and imidacloprid to different development stages of Bemisia tabaci B-biotype were determined using leaf-dipping method. The results showed that matrine had the highest toxicity to eggs of B. tabaci, the LC50 value was 0.802 mg·L-1, which was 323.8 times as high as imidacloprid; abamectin, matrine and imidacloprid showed high toxicities to 1st and 3rd instar nymphs, and the toxicity to 1st instar nymphs was higher than to 3rd instar nymphs; abamectin and matrine had high toxicities to adults, which were 111.6 and 77.4 times as high as imidacloprid respectively; methomyl and cypermethrin had lower toxicities to all development stages of whitellies.

  2. A SURVEY OF SIZES AND WEIGHTS OF BEMISIA TABACI(HOMOPTERA: ALEYRODIDAE)B BIOTYPE LIFE STAGES FROM FIELD GROWN COTTON AND CANTALOUPES

    Institute of Scientific and Technical Information of China (English)

    Chang-chiChu; JamesS.Buckner; KamilKarut; ThomasP.Freeman; DennisR.Nelson; ThomasJ.Henneberryl

    2003-01-01

    Size and weight measurements were made for all the life stages of Bemisia tabaci (Gennadius) B biotype from field grown cotton ( Gossypium hirsutum L. ) and cantaloupe ( Cucumis melo L., var. cantalupensis )in Phoenix, AZ and Fargo, ND, USA in 2000 and 2001. Nymphal volumes were derived from the measurements.The average nymphal volume increase for settled 1 st to the late 4th instar was exponential. The greatest increase in body volume occurred during development from the 3rd to early 4th instar. Nymphs on cotton leaves were wider,but not longer compared with those on cantaloupe. Ventral and dorsal depth ratios of nymphal bodies from 1st tolate 4th instars from cantaloupe leaves were significantly greater compared with those from cotton leaves. During nymphal development from 1st to 4th instar, the average (from the two host species) ventral body half volume in-creased by nearly 51 times compared with an increase of 28 times for the dorsal body half volume. Adult female and male average lengths, from heads to wing tips, were 1 126 μm and 953 μm, respectively. Average adult fe-male and male weights were 39 and 17 μg, respectively. Average widths, lengths, and weights of eggs from cottonand cantaloupe were, 99 μm, 197 μm, and 0.8 μg, respectively. Average widths, lengths, and weights for exu-viae of non-parasitized nymphs from both cotton and cantaloupe were 492 μm, 673 μm, and 1.20 μg, respective-ly; and widths, lengths, and weights of parasitized nymph exuviae were 452 μm, 665 μm, and 3.62 μg, respec-tively. Both exuviae from non-parasitized and parasitized nymphs from cotton leaves were wider, longer, and heavier than those from cantaloupe leaves.

  3. 非洲紫罗兰两侧与辐射对称花中两个CYC-类完整基因的分离和序列分析%Isolation and sequence analysis of two CYC-like genes, SiCYC1A and SiCYC1B, from zygomorphic and actinomorphic cultivars of Saintpaulia ionantha (Gesneriaceae)

    Institute of Scientific and Technical Information of China (English)

    王磊; 高秋; 王印政; 林启冰

    2006-01-01

    Using the mTAIL-PCR method, we have isolated the two CYC-like genes, SiCYC1A and SiCYC1B, from zygomorphic and actinomorphic cultivars of Saintpaulia ionantha respectively in Gesneriaceae. The two genes, SiCYC1A and SiCYC1B, from the zygomorphic cultivar both contain the whole regulation domain, i.e. TCP and R domains. Therefore, they should be functional in the floral symmetry establishment, homologous with CYC in Antirrhinum majus. Unexpectedly, the two genes from the actinomorphic cultivar are identical to those from the zygomorphic in DNA sequence, respectively. Based on comparative analysis of the molecular alteration at CYC-like genes, which are responsible for the morphological transformation from zygomorphy to actinomorphy, we suggest that the two closely related genes SiCYC1A and SiCYC1B might be regulated by a common upstream regulator, whose change would result in silence of both SiCYC1A and SiCYC1B in controlling the development of the adaxial and lateral organs in a flower. In addition, an mTAIL-PCR method was shown to have the technological advantages of the unknown sequence for isolation.%在已知GCYC基因部分序列基础上, 通过改进的mTAIL-PCR方法克隆非洲紫罗兰Saintpaulia ionantha两侧对称栽培种中CYC类基因的5′未知序列, 并进而从两侧与辐射对称栽培种中分离得到苦苣苔科Gesneriaceae中第一组完整基因: SiCYC1A与SiCYC1B.对以上基因的核酸和氨基酸序列比较发现, SiCYC1A与SiCYC1B序列同源性很高, 均含有完整的功能调控区域(即TCP domain和R domain)并与模式植物金鱼草Antirrhinum majus中CYC基因同源.因此, 这两个基因应具有正常功能, 是功能上互补的冗余基因.令人意外的是在辐射对称花栽培品种中的这两个基因和两侧对称花栽培品种中对应基因的序列完全相同.经过对金鱼草以及相关类群辐射对称花突变体中CYC类基因序列的比较分析, 推论在非洲紫罗兰中, SiCYC1A与SiCYC1B

  4. Distribuição de glyphosate e acúmulo de nutrientes em biótipos de azevém Glyphosate distribution and nutrient accumulation in ryegrass biotypes

    Directory of Open Access Journals (Sweden)

    E.A. Ferreira

    2008-03-01

    produto.This work aimed to evaluate nutrient accumulation and glyphosate translocation in ryegrass biotypes. Two trials were conducted: in the first, 10 uL of 14C-glyphosate ware applied on the upper side of the first leaf showing completely visible ligule, with ryegrass plants at the three-tiller stage. The amount of glyphosate absorbed, translocated and exudated was evaluated 64 hours after application, by using a liquid scintillation spectrometer. Glyphosate was quantified in the leaf it had been applied, in the tillers, roots and in the nutritive solution the plants were grown. In the second trial, glyphosate was applied on the resistant and the susceptible biotypes at the rate of 480 g L-1. Ten days after application, the shoot and roots were collected and oven-dried and the levels of macronutrients were determined. In the first trial, root exudation was observed in both biotypes, in which the amount of exudated glyphosate was similar and not greater than 5% of the absorbed glyphosate. In the main tiller of the susceptible biotype, a higher concentration of 14C-glyphosate was observed, compared to the resistant one. The resistant biotype showed more glyphosate accumulation in the leaf it had been applied and in the susceptible biotype; most 14-C glyphosate was found in the root system. In the second trial, the susceptible biotype showed less P accumulation than the resistant one. Both the resistant and susceptible biotypes tended to accumulate more total N and inorganic N in the shoot and in the whole plant in the absence of glyphosate, compared to the applied treatments. Both biotypes presented the same absorption capacity and macronutrients accumulation in the absence of the glyphosate.

  5. Effect of dose and application site on quinclorac absorption by barnyardgrass biotypes Efeito de dose e local de aplicação na absorção de quinclorac em biótipos de capim-arroz

    Directory of Open Access Journals (Sweden)

    G. Concenço

    2009-01-01

    Full Text Available This work aimed to evaluate the uptake and translocation of quinclorac in function of application sites (shoot or roots by Echinochloa crusgalli biotypes resistant and susceptible to this herbicide. The treatments consisted of quinclorac doses (0; 0.5; 1; 2; 4; 16 and 64 ppm, applied on the shoot or roots of seedlings of barnyardgrass biotypes. The experimental units consisted of plastic cups containing 250 cm³ of sand. The treatments were applied 10 days after emergence, when barnyardgrass plants reached a 2- to 3- leaf growth stage. The barnyardgrass biotypes were irrigated with nutritive solution weekly and maintained for 40 days after emergence, when length, fresh and dry matter of shoot and roots were evaluated. Variance analysis was carried out using the F test at 5% probability, and in case of significance, a non-linear regression analysis was also carried out using a three-parameter logistic model. In the susceptible biotype, quinclorac was more absorbed by the roots than by the shoot. Comparing dry mass production of the different plant parts of the susceptible biotype per application site, it was verified that quinclorac action is higher when applied to the plant roots. However, for the resistant biotype, it was not possible to determine the dose causing 50% reduction in dry mass accumulation (GR50 and in the resistance index (RI between both biotypes, due to its high resistance to quinclorac (128 times the recommended dosage. The results showed that quinclorac resistance by the evaluated biotype is not due to differences in the absorption site, strongly suggesting that the resistance acquired by the biotype may result from alteration in the target site.Objetivou-se com este trabalho avaliar a absorção e a translocação do quinclorac em função dos locais de aplicação (parte aérea ou raiz em biótipos de capim-arroz (Echinochloa crusgalli resistente e suscetível a esse herbicida. Os tratamentos foram compostos por doses de

  6. Toxicity of neem oil to Bemisia tabaci biotype B nymphs reared on dry bean Toxicidade de óleo de nim para ninfas de Bemisia tabaci biótipo B criadas em feijoeiro

    OpenAIRE

    Patricia Valle Pinheiro; Eliane Dias Quintela; Jaison Pereira de Oliveira; José Carlos Seraphin

    2009-01-01

    The objective of this work was to determine the most susceptible nymphal stage of Bemisia tabaci biotype B to neem (Azadirachta indica A. Juss.) oil applied to dry bean (Phaseolus vulgaris L.) in a screenhouse. A solution of commercial oil (Dalneem) extracted from neem seeds was sprayed directly on each nymphal instar at 0, 0.1, 0.25, 0.5, 1 and 2% concentrations for lethal concentration (LC) determination, and at 0, 0.5 and 1% concentrations for lethal time (LT) determination. The number of ...

  7. Habilidade competitiva de plantas de arroz com biótipos de capim-arroz resistente ou suscetível ao quinclorac Competitive ability of rice plants with barnyardgrass biotypes resistant or susceptible to quinclorac

    Directory of Open Access Journals (Sweden)

    S.P. Tironi

    2009-06-01

    Full Text Available Objetivou-se com este trabalho avaliar a habilidade competitiva de plantas de arroz cultivar BRS Pelota com biótipos de capim-arroz resistente ou suscetível ao herbicida quinclorac. Para isso, foi instalado experimento em casa de vegetação, em delineamento completamente casualizado com quatro repetições, sendo os tratamentos dispostos em esquema fatorial 2 x 6. As unidades experimentais constaram de vasos plásticos contendo 10 dm³ de solo, cujo pH e nível de nutrientes foram previamente corrigidos. Os tratamentos consistiram na competição entre uma planta de arroz, cultivar BRS Pelota, com populações (0, 1, 2, 3, 4 ou 5 plantas por vaso dos biótipos de capim-arroz resistente (ECH-13 ou suscetível (ECH-12 ao herbicida quinclorac. As avaliações foram realizadas aos 40 dias após emergência, sendo avaliados; massa seca da parte aérea (MSPA, taxa de crescimento (TC, área foliar específica (AFE, razão de massa foliar (RMF, razão de área foliar (RAF e índice de área foliar (IAF. A interferência no desenvolvimento do cultivar de arroz BRS Pelota foi proporcionalmente maior com o aumento da população de ambos os biótipos de capim-arroz. Os biótipos apresentaram, em geral, habilidade competitiva similar.The objective of this study was to evaluate the competitive ability of the rice cultivar BRS Pelota with biotypes resistant or susceptible to the herbicide Quinclorac. The experiment was conducted under greenhouse conditions in a completely randomized design with four replications, with the treatments arranged in a 2 x 6 factorial. The experimental units consisted of plastic pots containing 10 dm³ of soil, with pH and nutrient level being previously corrected. The treatments consisted of a competition between a rice plant, BRS Pelota cultivar, with populations (0, 1, 2, 3, 4 or 5 plants per pot of the barnyardgrass biotypes resistant (ECH-13 or susceptible (ECH -12 to the herbicide Quinclorac. The evaluations were performed

  8. Plasmids in Mycoplasma species isolated from goats and sheep and their preliminary typing

    Directory of Open Access Journals (Sweden)

    Nascimento Elmiro R.

    1999-01-01

    Full Text Available One-hundred-five (105 clinical isolates of mycoplasma from caprine origin and one isolate from ovine were surveyed for plasmids, which were present in thirty-three (31% of them. These mycoplasmas originated from 13 herds. Ten of them were symptomatic for mycoplasmal disease (mastitis, polyarthritis, septicemia and three herds were asymptomatic, i.e., clinically normal. Twenty-eight isolates were Mycoplasma mycoides subspecies mycoides LC (large colony or caprine biotype, four were Mycoplasma capricolum subsp. capricolum and one was Mycoplasma cottewii. The isolated plasmids were linearized by EcoRI, EcoRV, EcoRI and EcoRV or BamHI and EcoRV, and were of five sizes (1.1, 1.6, 1.7, 1.8, and 1.9 Kbp. Based on restriction enzyme digestion and size of the linearized supercoiled extrachromosomal DNA, five plasmid types were recovered (p1II, p2III, p2V, p3I, and p4IV. The small size of these DNA elements probably exclude replicative forms of DNA virus, which are equal or larger than 8.0 Kbp.

  9. Composição química da cera epicuticular de biótipos de azevém resistente e suscetível ao glyphosate Chemical composition of the epicuticular wax of Italian ryegrass biotypes resistant and susceptible to glyphosate

    Directory of Open Access Journals (Sweden)

    A.A. Guimarães

    2009-03-01

    Full Text Available Objetivou-se com este trabalho determinar a composição química da cera epicuticular dos biótipos de azevém (Lolium multiflorum resistente e suscetível ao glyphosate, buscando relações entre suas características e a resistência dos biótipos ao herbicida. A cera epicuticular foi extraída e quantificada e os seus constituintes analisados por cromatografia em fase gasosa, acoplada a espectrômetro de massa (CG-EM. Para determinação da composição química, amostras de lâmina foliar foram retiradas 30 dias após a emergência das plantas, coletando-se a primeira folha com lígula totalmente visível. A quantidade de cera epicuticular extraída não diferiu entre os biótipos. Entre os compostos que constituem a cera epicuticular, os álcoois são os mais abundantes, sendo representados por apenas um composto: o hexacosan-1-ol (46,80% no biótipo resistente e 52,20% no biótipo suscetível. Ao comparar a polaridade da cera epicuticular dos biótipos de azevém, constatou-se que tanto no biótipo resistente quanto no suscetível a cera epicuticular apresentou mais de 50% de componentes polares (álcoois e aldeídos em sua constituição, sendo esse valor igual a 69,80% no biótipo resistente e 64,94% no biótipo suscetível. Por meio da caracterização apresentada, pode-se afirmar que existem pequenas diferenças na cera epicuticular dos biótipos de azevém resistente e suscetível ao glyphosate; o biótipo resistente apresentou grau de polaridade pouco superior ao do biótipo suscetível, porém essa diferença não pode ser considerada marcante a ponto de determinar maior ou menor tolerância de um biótipo ou outro ao herbicida glyphosate.The objective of this work was to determine the chemical composition of epicuticular wax of Italian ryegrass (Lolium multiflorum biotypes resistant and susceptible to glyphosate, searching for relationships between their characteristics and the resistance of the biotypes to the product. The

  10. Isolation and characterisation of lactic acid bacteria from donkey milk.

    Science.gov (United States)

    Soto Del Rio, Maria de Los Dolores; Andrighetto, Christian; Dalmasso, Alessandra; Lombardi, Angiolella; Civera, Tiziana; Bottero, Maria Teresa

    2016-08-01

    During the last years the interest in donkey milk has increased significantly mainly because of its compelling functional elements. Even if the composition and nutritional properties of donkey milk are known, its microbiota is less studied. This Research Communication aimed to provide a comprehensive characterisation of the lactic acid bacteria in raw donkey milk. RAPD-PCR assay combined with 16S rDNA sequencing analysis were used to describe the microbial diversity of several donkey farms in the North West part of Italy. The more frequently detected species were: Lactobacillus paracasei, Lactococcus lactis and Carnobacterium maltaromaticum. Less abundant genera were Leuconostoc, Enterococcus and Streptococcus. The yeast Kluyveromyces marxianus was also isolated. The bacterial and biotype distribution notably diverged among the farms. Several of the found species, not previously detected in donkey milk, could have an important probiotic activity and biotechnological potential. This study represents an important insight to the ample diversity of the microorganisms present in the highly selective ecosystem of raw donkey milk. PMID:27600975

  11. Novos biótipos pentaplóides do grupo Dilatata de Paspalum L. (Gramineae no Sul do Brasil New pentaploid biotypes of the Dilatata group of Paspalum L. (Gramineae from Southern Brazil

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    Ana Caroline de Carvalho Machado

    2005-02-01

    , cytological and reproductive types have been cited for the species. "Common" P. dilatatum is the biotype of greatest agronomic interest. The assessment of the species importance as a component of good quality forage production in natural pastures has resulted in continuous interest for the possibility of its enhanced use in cultivation. Among materials of the Dilatata group analyzed here, six accessions of uncertain taxonomic classification showed a distinct morphology. We believe they result from natural hybridization processes in yet unknown combinations. Mitotic analysis showed they all have 2n=50 chromosomes. Three of these accessions showed intermediate morphological features between "Virasoro" (4x, sexual and "Uruguaiana" (6x, apomitic biotypes. Confirmation of close geographic occurrence stresses the hybridization hypothesis, and broadens the known area of occurrence of the sexual biotype involved in this cross. The other accessions are, most probably, natural hybrids between the "Torres" biotype of P. dilatatum and P. urvillei. Such accessions have inflorescences with a larger axis and more branches than typical plants of "Torres" biotype. Morphological and cytological characterization of this different materials may lead to the establishment of reliable parameters for their differentiation and possible assignment to an adequate taxonomic category. We suggest that these new pentaploid biotypes, distinct from the "Common" biotype, derived from crosses that occurred in Southern Brazil between other biotypes and species of the group.

  12. Biological aspects of Bemisia tabaci (Genn.) B biotype (Hemiptera: Aleyrodidae) on six bean genotypes; Aspectos biologicos de Bemisia tabaci (Genn.) biotipo B (Hemiptera: Aleyrodidae) em seis genotipos de feijoeiro

    Energy Technology Data Exchange (ETDEWEB)

    Oriani, Maria A. de G. [Universidade Federal de Sao Carlos (UFSCAR), SP (Brazil). Dept. de Ecologia e Biologia Evolutiva; Vendramin, Jose D. [Universidade de Sao Paulo (USP), Piracicaba, SP (Brazil). Escola Superior de Agricultura Luiz de Queiroz (ESALQ). Dept. de Entomologia, Fitopatologia e Zoologia Agricola; Brunherotto, Rogerio [Fundacao Municipal de Ensino Superior de Braganca Paulista, SP (Brazil)

    2008-03-15

    The silverleaf whitefly is one of the most harmful pests that attack bean crops, mainly for extracting large quantities of phloem sap and transmitting the bean golden mosaic virus. Resistant germplasm plants can be an important method for controlling this pest. The biological aspects of Bemisia tabaci B biotype on bean (Phaseolus vulgaris) genotypes were evaluated. The tests were conducted under laboratory conditions, with the following genotypes: Arc 1, Arc 3s, Arc 5s, G13028, G11056 and Porrillo 70. The bean plants in a stage IV-1 were infested during one day with silverleaf white flies. Afterwards the eggs and nymphs were observed until adult emergence. Longevity and fecundity of emerged insects were also evaluated. The longest development time occurred for nymphs fed on Arc 3s genotype (26.5 days), following by G11056 (25.9 days) and G13028 (25.3 days). The development period was 5.5 days longer in Arc 3s when compared with Porrillo 70. Also, the wild genotypes Arc 3s and G11056 showed higher mortality rates (94.7% and 83.1%, respectively), which may suggest antibiosis and/or feeding non preference resistance type. For this reason, although longevity and fecundity were not influenced when the whitefly fed on resistant genotypes (Arc 3s, G11056, G13028 and Arc 5s), those genotypes can be used for bean breeding program towards B. tabaci B biotype. (author)

  13. 生物型自锁式人工髋关节假体的改良设计%Modified design of biotype self-locking hip joint prosthesis

    Institute of Scientific and Technical Information of China (English)

    黄伟韬; 李彩华; 蒋托; 杨俊

    2016-01-01

    体的推荐指标。%BACKGROUND:Hip prosthesis needs to meet the good structural compatibility with femoral bone marrow cavity and the biomechanical properties of the original bone tissue. However, the difference of individual anatomical characteristics and the stress concentration in the local area after replacement directly affect postoperative combination of femoral prosthesis stem, force flow transfer and femoral reconstruction, and finaly result in aseptic loosening of hip joint in some patients. OBJECTIVE:To analyze the biomechanical characteristics of modified biotype self-locking hip prosthesis by the method of finite element analysis, and to provide the reference for the application of self-locking hip prosthesis in hip replacement. METHODS:Experimental design contained traditional biotype hip joint prosthesis group and self-locking hip joint prosthesis group. In accordance with the finite element models of self-locking hip prosthesis, 28 kinds of screw fixation were established. Three-dimensional models were generated in the Minics system. After the optimization of prosthesis, prosthesis was designed. In the Solidworks software, the femur was re-positioned and set for contacting set in Ansys to analyze the stress distribution and displacement distribution of the femoral-prosthesis-screw by Ansys. We compared the peak of stress and displacement of the femur and prosthesis, and analyzed the biomechanical stability of prosthesis. RESULTS AND CONCLUSION:(1) By using the Ansys finite element method, we analyzed the stress and displacement distribution of the femoral-prosthesis-screw. The minimum stress peak value of the femur was 15.698 MPa. The minimum stress peak value of prosthesis was 45.491 MPa. The minimum stress peak value of screw was 8.359 MPa. The minimum displacement peak value of femur was 1.125 3 mm. The minimum displacement peak value of prosthesis was 1.039 6 mm. The minimum displacement peak value of screw was 0.566 4 mm. (2) Compared with the traditional biotype hip joint prosthesis group

  14. Uso da água em biótipos de azevém (Lolium multiflorum em condição de competição Water use in italian ryegrass (Lolium multiflorum biotypes under competition

    Directory of Open Access Journals (Sweden)

    G. Concenço

    2007-09-01

    Full Text Available Objetivou-se com este trabalho avaliar as características associadas à eficiência de uso da água em biótipos de azevém resistente e suscetível ao glyphosate, em diferentes níveis de competição. O experimento foi realizado em esquema fatorial 2 x 5, com os dois biótipos de azevém, suscetível e resistente, em planta única no centro da parcela, competindo com 0, 1, 2, 3 e 4 plantas do biótipo oposto. Todas as características matéria seca da parte aérea (MSPA, condutância estomática (Gs, pressão de vapor na câmara subestomática (Ean, gradiente entre temperatura da folha e do ar (deltaT e taxa de transpiração (E foram avaliadas 50 dias após a emergência das plantas, sendo calculada também a eficiência do uso da água (WUE pela relação entre a quantidade de CO2 fixado pela fotossíntese e a quantidade de água transpirada. Foi elaborada ainda uma matriz de correlação entre as variáveis. O biótipo suscetível apresentou maior acúmulo de MSPA, comparado ao biótipo resistente ao glyphosate, quando cultivado livre ou em competição, porém foi menos eficiente quanto ao uso da água.The objective of this work was to evaluate the characteristics associated to water use efficiency in ryegrass biotypes resistant and susceptible to glyphosate, under different competition levels. The trial was installed in factorial scheme (2 x 5, with one plant of the studied biotype alone at the center of the plot, under competition against 0, 1, 2, 3 and 4 plants of the opposite biotype. The variables (shoot dry matter (MSPA, water vapor stomatal conductance (Gs, water vapor pressure from the leaf chamber (Ean, leaf and air temperature difference (deltaT and transpiration rate (E were evaluated 50 days after emergence, with water use efficiency (WUE being obtained by the relation between the amount of CO2 fixed by photosynthesis and the corresponding transpired water. A correlation table was built between all evaluated variables. The

  15. Resistência de genótipos de feijoeiro a Bemisia tabaci biótipo B Resistance of bean genotypes to Bemisia tabaci biotype B

    Directory of Open Access Journals (Sweden)

    Lucas Castro Torres

    2012-01-01

    Full Text Available O estudo de genótipos de feijoeiro resistentes à mosca-branca Bemisia tabaci (Genn. biótipo B (Hemiptera: Aleyrodidae é de grande importância devido aos danos ocasionados por essa praga à cultura. Neste trabalho, foram estudados a atratividade para adultos, a preferência para oviposição em testes com e sem chance de escolha, o ciclo ovo-adulto e o tipo e número de tricomas presentes nos folíolos. Os experimentos foram realizados em casa de vegetação avaliando-se, inicialmente, cem genótipos de feijoeiro. A resistência do tipo não-preferência para alimentação e/ou antibiose foi observada nos genótipos ARC-3, IAC-Alvorada e Canário 101, sendo a emergência de adultos fortemente influenciada pelos genótipos. Também se observou correlação negativa moderada entre o número de ovos e o número de tricomas glandulares, e correlação positiva muito forte entre o número de ovos e o número de tricomas tectores unciformes.The study of bean genotypes resistant to the whitefly Bemisia tabaci (Genn. B biotype (Hemiptera: Aleyrodidae has been of great importance due to the damage caused by this pest. In this research, bean genotypes were evaluated regarding attractiveness to whitefly adults, the preference for oviposition in free-choice and non choice tests, egg-to-adult development time and characterized for the presence, type and number of trichomes. The experiments were carried out under greenhouse conditions initially evaluating 100 bean genotypes. The non-preference type of resistance for feeding and/or antibiosis was observed in the genotypes ARC-3, IAC-Alvorada and Canário 101, and the emergence of adults was strongly influenced by the genotypes. It was also observed a moderate negative correlation between the number of eggs and the number of glandular trichomes, as well as a very strong positive correlation between the number of eggs and the number of unciform non-glandular trichomes.

  16. 耐水星、农得时雨久花生物型杂草的发生及防治%The occurrence and prevention of tolerant biotype Monochoria Korsakowii Regel et Maacket to pyrazosulfuron-ethyl and bensulfuron-methyl

    Institute of Scientific and Technical Information of China (English)

    朴仁哲; 金玉姬; 蔡春鹏; 姜成

    2004-01-01

    研究了不同生物型雨久花对水星和农得时的耐性差异.耐性生物型的GR50比感性生物型高2.42和2.80倍.禾大壮和西草净的配合使用对耐性雨久花的鲜重防效达95%以上,丁草胺和扑草净、西草净、扑草净的鲜重防效达80%以上.%The different tolerances to pyrazosulfuron-ethyl and bensulfuron-methyl of different biotypes of Monochoria Korsakowii Regel et Maacket were researched. The tolerant Monochoria Korsakowii Regel et Maacket to pyrazosulfuron-ethyl and bensulfuron-methyl was discovered in Longjing City in Jilin Province. The GRs0 of tolerant biotype was 2.42 times and 2.80 times higher than that of susceptible biotype . The controlling effect on the fresh weight of tolerant biotype of mixture of molinate and simetryne could reach more than 95 %. The controlling effect of the mixture of butachlor and prometryne, simetryne, and prometryne could reach more than80%.

  17. Utility of mtCOI PCR-RFLP in differentiating invasive and local whitefly biotypes of China%mtCOI PCR-RFLP技术鉴别中国入侵型和土著型烟粉虱种群的有效性分析

    Institute of Scientific and Technical Information of China (English)

    周新改; 刘美刚; 杨小红; 林克剑; 马伟华; 王沫

    2012-01-01

    Bemisia tabaci (Gennadius) is one of the most important invasive pests in China. The mtCOI PCR - RFLP technique is currently widely used to identify different whitefly biotypes worldwide. In this paper, we compared the utility and efficiency of five commonly reported mtCOI based PCR - RFLP techniques in differentiating invasive and local B. tabaci biotypes (B, Q, ZHJ1, ZHJ2 and ZHJ3) in China. Our results show that the Alul enzyme fails to differentiate between the B and ZHJ2 biotypes, the TaqI enzyme cannot effectively differentiate between the ZHJ3 and Q biotypes, the Vspl enzyme is not effective in differentiating between either the B and ZHJ2 biotypes or the Q and ZHJ1 biotypes, and the Msel and Tru9I enzymes are completely unable to identify any of the five biotypes found in China.%烟粉虱Bemisia tabaci( Gennadius)是世界范围内最重要的入侵生物之一,准确地鉴别烟粉虱入侵生物型和土著生物型具有十分重要的现实意义.mtCOI PCR-RFLP技术具有快速、高效的特点,是当前应用最广泛的烟粉虱生物型鉴定技术,但是,不同限制性内切酶为基础的mtCOI PCR-RFLP技术在鉴定我国烟粉虱种群中的有效性仍不明了.本文比较了已报导的5种mtCOI PCR-RFLP技术在鉴别中国烟粉虱种群入侵生物型和土著生物型(B型、Q型,ZHJ1型、ZHJ2型、ZHJ3型)的有效性.结果表明,内切酶AluI不能区分B型和ZHJ2型烟粉虱;内切酶TaqI不能准确区分ZHJ3型和Q型烟粉虱个体;而内切酶VspI不仅不能准确区分ZHJ1型和Q型烟粉虱个体,也不能准确区分B型和ZHJ2型烟粉虱;内切酶MseI和Tru9I则不能有效鉴别上述5种烟粉虱生物型,因此不适宜推广使用.

  18. Study of Corynebacterium diphtheriae strains isolated in Romania, northwestern Russia and the Republic of Moldova.

    Science.gov (United States)

    Damian, Maria; Grimont, Francine; Narvskaya, Olga; Straut, Monica; Surdeanu, Maria; Cojocaru, Radu; Mokrousov, Igor; Diaconescu, Angela; Andronescu, Constantin; Melnic, Anatol; Mutoi, Ludmila; Grimont, Patrick A D

    2002-03-01

    A selection of 167 Corynebacterium diphtheriae strains isolated in Romania, the Russian Federation and the Republic of Moldova were analysed by biotyping, phage typing, the toxin production test and by molecular techniques such as ribotyping, pulsed field gel electrophoresis and random amplified polymorphic DNA, in order to establish the epidemiological relatedness, genetic divergence and strain circulation within and between the bordering countries. Using a set of five digoxigenin-labeled oligonucleotides and BstEII digestion, 34 ribotypes were identified. The strains isolated in the epidemic areas (Russia and Moldova) were very closely related but different from those isolated in Romania. C1 and C5 were the main ribotypes identified in these areas. Neither ribotype was found in Romania, where the main circulating types were C3 and C7. Field inversion gel electrophoresis was more discriminative than ribotyping and revealed 54 macrorestriction profiles after SfiI restriction. Both methods showed a significant homogeneity of the strains from epidemic areas and a large diversity among the Romanian strains. Random amplification was useful as an identification method for the epidemic strains, but not for the Romanian ones which displayed a large number of amplification profiles. The phenotypic methods associated with molecular typing techniques enabled distinguishing between strains, detecting the epidemic clone, and sustaining the absence of transmission across borders.

  19. High-frequency rugose exopolysaccharide production by Vibrio cholerae strains isolated in Haiti.

    Directory of Open Access Journals (Sweden)

    Mustafizur Rahman

    Full Text Available In October, 2010, epidemic cholera was reported for the first time in Haiti in over 100 years. Establishment of cholera endemicity in Haiti will be dependent in large part on the continued presence of toxigenic V. cholerae O1 in aquatic reservoirs. The rugose phenotype of V. cholerae, characterized by exopolysaccharide production that confers resistance to environmental stress, is a potential contributor to environmental persistence. Using a microbiologic medium promoting high-frequency conversion of smooth to rugose (S-R phenotype, 80 (46.5% of 172 V. cholerae strains isolated from clinical and environmental sources in Haiti were able to convert to a rugose phenotype. Toxigenic V. cholerae O1 strains isolated at the beginning of the epidemic (2010 were significantly less likely to shift to a rugose phenotype than clinical strains isolated in 2012/2013, or environmental strains. Frequency of rugose conversion was influenced by incubation temperature and time. Appearance of the biofilm produced by a Haitian clinical rugose strain (altered biotype El Tor HC16R differed from that of a typical El Tor rugose strain (N16961R by confocal microscopy. On whole-genome SNP analysis, there was no phylogenetic clustering of strains showing an ability to shift to a rugose phenotype. Our data confirm the ability of Haitian clinical (and environmental strains to shift to a protective rugose phenotype, and suggest that factors such as temperature influence the frequency of transition to this phenotype.

  20. High-frequency rugose exopolysaccharide production by Vibrio cholerae strains isolated in Haiti.

    Science.gov (United States)

    Rahman, Mustafizur; Jubair, Mohammad; Alam, Meer T; Weppelmann, Thomas A; Azarian, Taj; Salemi, Marco; Sakharuk, Ilya A; Rashid, Mohammed H; Johnson, Judith A; Yasmin, Mahmuda; Morris, J Glenn; Ali, Afsar

    2014-01-01

    In October, 2010, epidemic cholera was reported for the first time in Haiti in over 100 years. Establishment of cholera endemicity in Haiti will be dependent in large part on the continued presence of toxigenic V. cholerae O1 in aquatic reservoirs. The rugose phenotype of V. cholerae, characterized by exopolysaccharide production that confers resistance to environmental stress, is a potential contributor to environmental persistence. Using a microbiologic medium promoting high-frequency conversion of smooth to rugose (S-R) phenotype, 80 (46.5%) of 172 V. cholerae strains isolated from clinical and environmental sources in Haiti were able to convert to a rugose phenotype. Toxigenic V. cholerae O1 strains isolated at the beginning of the epidemic (2010) were significantly less likely to shift to a rugose phenotype than clinical strains isolated in 2012/2013, or environmental strains. Frequency of rugose conversion was influenced by incubation temperature and time. Appearance of the biofilm produced by a Haitian clinical rugose strain (altered biotype El Tor HC16R) differed from that of a typical El Tor rugose strain (N16961R) by confocal microscopy. On whole-genome SNP analysis, there was no phylogenetic clustering of strains showing an ability to shift to a rugose phenotype. Our data confirm the ability of Haitian clinical (and environmental) strains to shift to a protective rugose phenotype, and suggest that factors such as temperature influence the frequency of transition to this phenotype.

  1. Identificação de biótipos de azevém (Lolium multiflorum resistentes ao herbicida glyphosate em pomares de maçã Identification of glyphosate-resistant ryegrass (Lolium multiflorum biotypes in apple orchards

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    L. Vargas

    2004-12-01

    geral, evidenciam que o biótipo sensível é facilmente controlado com o herbicida glyphosate e pelos demais herbicidas pós-emergentes avaliados, independentemente do estádio vegetativo. Demonstram, ainda, que o biótipo resistente apresenta-se, igualmente ao biótipo sensível, altamente suscetível aos herbicidas com mecanismo de ação distinto daquele do glyphosate. No entanto, o biótipo resistente apresenta baixa resposta ao herbicida glyphosate, mesmo se este for empregado em altas doses, evidenciando ter adquirido resistência a esse produto.Glyphosate is a wide spectrum herbicide used for over 15 years in apple orchards in Vacaria-RS for weed control in rows of trees. Usually, 3 to 4 applications per year are made at a rate of 720 to 1080 g a.e. glyphosate ha-1 (2 to 3 L ha-1 of commercial product. Ryegrass (Lolium multiflorum is a common weed in orchards and traditionally sensitive to glyphosate. However, in the last years, some ryegrass plants have not been found to show significant toxicity symptoms after treatment with glyphosate, suggesting that they acquired resistance to this product. To evaluate the response of a ryegrass plant population to glyphosate, one field and two greenhouse experiments were carried out. The field experiment treatments had increasing rates of glyphosate (0; 360; 720; 1,440; 2,880; 5,760 and 11,520 g a.e. ha-1, in addition to the herbicides paraquat, glufosinate-ammonium, haloxyfop and diclofop-methyl as standards, sprayed at two different vegetative growth stages of ryegrass. The greenhouse experiments had increasing rates of glyphosate (0; 360; 720; 1,440; 2,880 and 5,760 g a.e. ha-1 plus the above listed check herbicides sprayed on biotypes considered resistant and on plants of one susceptible biotype. In the second greenhouse experiment, glyphosate rates (720; 1,440; 2,880; 720 + 720 and 720 + 1,440 g a.e. ha-1 were sprayed in single and sequential applications, in addition to the herbicides paraquat, glufosinate

  2. Research progress on biotypes and genetic diversity of grape phylloxera%葡萄根瘤蚜生物型和遗传多样性研究进展

    Institute of Scientific and Technical Information of China (English)

    孙庆华; 杜远鹏; 王兆顺; 翟衡

    2012-01-01

    Grape phylloxera (Daktulosphaira vitifoliae Fitch.) feeding only on Vitis is one of the quaran- tine pests in the word, it devasted viticulture throughout the word during the latter half of the 19th century. Resistant grape rootstocks are the only effective control tool, however, because of the coevolution of phyl- loxera and grape, the intrinsic virulence of grape phylloxera strains has been observed on roots of some rootstocks, of which a typical example was that rootstock AxR#1 was overcomed by phylloxera biotype B identified in California. These findings stimulated molecular studies to analyze genetic diversity of grape phylloxera. In this review, the studies about biotype and genetic diversity of grape phylloxera were briefly summarized, meanwhile, the significance of those studies on grape phylloxera biotypes was also discussed.%葡萄根瘤蚜(Daktulosphaira vitifoliae Fitch.)是世界检疫性葡萄专性寄生害虫,19世纪末20世纪初根瘤蚜的大发生给世界葡萄产业造成了灭顶之灾,选育和利用抗性砧木成为葡萄生产的唯一选择。然而随着害虫的协同进化.一些强致病性类型不断出现.致使一些砧木的抗性正在丧失,如加卅I所使用的砧木AXR#1的抗性被强致病生物型B所克服;SO4、5C、104—14Mgt等强抗性砧木在一些地区也受到了根瘤蚜的侵染。根瘤蚜新生物型和强致病基因型的出现.推动了对根瘤蚜遗传多样性的研究。我们对葡萄根瘤蚜生物型及其鉴定方法、根瘤蚜的遗传变异研究进展进行了介绍.并讨论了根瘤蚜生物型研究的意义。

  3. 混合型与生物型人工全髋关节置换术后并发异位骨化的比较%Comparison of Incidence of Heterotopic Ossification in Combination Versus Biotype Total Hip Arthroplasty

    Institute of Scientific and Technical Information of China (English)

    黄伟敏; 于秀淳; 付志厚; 孙海宁

    2011-01-01

    Objective To compare the frequency of heterotopic ossification in patients with a vascular necrosis of femoral head who underwent combination or biotype total hip arthroplasty. Methods Seventy six patients who underwent combination prosthesis (cohort A) individually matched 76 patients with biotype prosthesis (cohort B). The match parameters were age (±5 years), sex and weight (±10 kg). The radiographs at 3 months and 12 months after the operation were used to evaluate the heterotopic ossification by Brooker classification. Results There were 21 cases of HO in cohort A, while 30 cases in cohort B. The ratio of HO was 27.63% and 39.47% respectively. Conclusion There are no significant statistic differences in the prevalence of heterotopic ossification between combination and biotype total hip arthroplasty in patients with avascular necrosis of femoral head. Fear of heterotopic ossification should not be a factor in the choice of fixation for THA.%目的 研究使用混合型与生物型假体的全髋关节置换术(THA)术后异位骨化(H0)的情况.方法 回顾性研究自2004年1月~2010年1月行初次单侧人工THA患者,从中配对选取76对,配对的参数为年龄、性别、体重.A组患者行混合型人工THA,B组患者行生物型人工THA.HO诊断依据术后3个月和12个月的髋关节前后位X线片,按Brooker分级记录.结果 A组发生HO的例数为21例,总发生率27.63%,B组发生HO例数为30例,总发生率为39.47%,两者差异无统计学意义.结论 混合型与生物型人工THA术后HO的发生率没有明显差异.

  4. Adequação de uma dieta artificial para os biótipos "milho" e "arroz" de Spodoptera frugiperda (Lepidoptera: Noctuidae Adaptation of an artificial diet for the biotypes "corn" and "rice" of Spodoptera frugiperda (Lepidoptera: Noctuidae

    Directory of Open Access Journals (Sweden)

    Gustavo Rossato Busato

    2006-01-01

    Full Text Available Spodoptera frugiperda é considerada uma das principais pragas da cultura do milho (lagarta-do-cartucho e do arroz irrigado (lagarta-da-folha, ocasionando altos índices de desfolhamento. O objetivo do estudo foi obter uma dieta artificial adequada para criar os biótipos "milho" e "arroz" de S. frugiperda (J.E. Smith, em laboratório. Os insetos foram coletados em áreas cultivadas com milho e arroz irrigado no ecossistema de várzea e a identificação foi realizada pela análise do DNA genômico. O desenvolvimento dos dois biótipos foi acompanhado sobre a dieta de Greene e a mesma dieta modificada a 25 ± 1ºC, UR de 70 ± 10% e fotofase de 14 horas. O estudo foi realizado com 150 lagartas por dieta, individualizadas em tubos de vidro e contendo dieta artificial. Por ocasião da emergência, 20 casais foram individualizados e alimentados com solução aquosa de mel a 10%. A dieta Greene possibilitou melhor desenvolvimento dos dois biótipos, proporcionando maior velocidade de desenvolvimento, maior massa de lagartas no máximo desenvolvimento, massa de pupas e fecundidade total, além de valores mais elevados da taxa líquida de reprodução, taxa intrínseca de crescimento e taxa finita de aumento.Spodoptera frugiperda is considered one of the main pest in corn and irrigated rice (fall armyworm crops, causing high leaf losses. The objective of this study was to obtain an appropriate artificial diet to rear the biotypes "corn" and "rice" of S. frugiperda in laboratory. The insects were collected in areas cultivated with corn and irrigated rice in the meadow ecosystem and the identification was accomplished by the analysis of the DNA genomic. The development of the two biotypes was accompanied on Greene's diet and the same diet modified to 25 ± 1ºC, UR of 70 10% and fotofase of 14 hours. The study was accomplished with 150 larvae by diet individualized in glass tubes containing artificial diet. At emergency 20 couples were individualized

  5. Gingiva biotype affects the soft tissue esthetic outcomes of immediate implant in the asthetic zone%在美学区即刻种植中牙龈生物型对红色美学效果的影响

    Institute of Scientific and Technical Information of China (English)

    王文君; 刘聪慧

    2015-01-01

    Objective:To analysis the influence of gingival biotype on pink esthetic of single-tooth immediate implant restorations in the anterior maxilla. Methods: 32 patients with single tooth immediate implant in the aesthetic zone were included. All patients were followed up 1 year after implant restorations, and divided into three groups (thin, compromised and thick gingival biotype) with different gingival biotypes by using periodontal probing. An intra-oral digital photograph was obtained and pink esthetic score (PES) were calculated for three groups. A non-parametric statistical analysis of the data was performed by software SPSS11.0. Results:There was statistical differences in PES between compromised and thick (P0.05). Conclusion: the gingival biotype may affect the soft tissue esthetic out-comes of single-tooth implant restorations in the asthetic zone, especially the mesial and distal papilla of the implants.%目的:分析在上前牙区单颗即刻种植治疗中,不同牙龈生物型对种植的红色美学效果影响。方法:选择上颌前牙区单颗牙即刻种植修复的患者32例,在种植修复完成一年后复查。用牙周探诊法判断牙龈生物型进行分组(薄型、中间型、厚型),每组患牙进行口内像拍照记录,做红色美学指数分析,采用SPSS11.0统计软件将结果进行非参数统计学分析。结果:红色美学指数总分比较时,中-厚之间有差别(P<0.05),薄-厚之间差别更明显(P<0.01),近中和远中龈乳头评分时,薄-厚之间有差别(P<0.05),其它各指标的差异无统计学意义(P>0.05)。结论:不同牙龈生物型患者前牙区即刻种植治疗时,红色美学效果不同,尤其是近远中牙龈乳头的美学效果区别明显。

  6. New biotypes of Metarhizium anisopliae var. anisopliae E9 strain with altered conidial germination, obtained by exposition to gamma radiation; Novos biotipos de Metarhizium anisopliae var. anisopliae (Metsch.) Sorokin com germinacao alterada de conidios, obtidos pela exposicao a radiacao gama

    Energy Technology Data Exchange (ETDEWEB)

    Oliveira, M.G.; Oliveira, N.T.; Luna Alves Lima, E.A. [Pernambuco Univ., Recife, PE (Brazil). Centro de Ciencias Biologicas. Dept. de Micologia

    1997-12-31

    Conidia produced by a wild strain (E9) of the entomopathogenic fungus M. anisopliae var anisopliae were exposed to gamma radiation in order to obtain new biotypes. At the 390 Gy dose there were obtained 48 colonies (MaE). On complete medium, 5 colonies (MaE 01, MaE 10, MaE 15, MaE 40) presented morphological changes in color while the colony MaE 24 lost its esporulation capacity. Twenty six colonies presented mycelial growth significantly different from the wild strain, after 12 days of incubation. Twelve colonies showed average of conidial germination different from the wild strain, after 12 days of incubation on liquid minimum medium at 25 deg C. The colony MaE started germination precociously after 5 hours of incubation. (author) 31 refs., 1 fig., 4 tabs.

  7. A comparative study of the removal of endosymbionts in Bemisia tabaci biotypes B and Q using three antibiotics%三种抗生素对B型和Q型烟粉虱内共生菌的去除效果比较研究

    Institute of Scientific and Technical Information of China (English)

    苏奇; 潘慧鹏; 王少丽; 吴青君; 徐宝云; 张友军

    2012-01-01

    利用烟粉虱Bemisia tabaci (Gennadius)内共生菌特异性引物,研究了内共生菌在B、Q型烟粉虱种群中的分布和感染率,同时评价了3种不同的抗生素利福平、氨苄青霉素和硫酸卡那霉素分别在3种不同的浓度下(100.0、50.0及25.0 μg/mL)对烟粉虱内共生菌的去除效果.结果表明:B、Q型烟粉虱原生内共生细菌Portiera 的带菌率均为100.0%;B、Q型烟粉虱次生内共生菌Hamiltonella的带菌率分别为91.7%和100.0%;B型烟粉虱次生内共生菌Rickettsia的带菌率为87.5%,Q型为0;其它次生内共生菌在B、Q型烟粉虱中均未检测到.利福平、氨苄青霉素和硫酸卡那霉素在3种不同的浓度下均不能去除B、Q型烟粉虱Portiera;利福平、氨苄青霉素在3种不同的浓度下均能完全去除B型烟粉虱Rickettsia,硫酸卡那霉素在不同浓度下去除Rickettsia的效果不同;3种抗生素去除Hamiltonella的能力受抗生素种类以及浓度的影响.同一抗生素在不同浓度下去除Hamiltonella的效果均是100.0 μg/mL >50.0 μg/mL >25.0 μg/mL;不同浓度的抗生素去除Hamiltonella的效果均是利福平>氨苄青霉素>硫酸卡那霉素,各浓度与各抗生素之间的去除Hamiltonella的效果均具有显著性差异.%A PCR survey of endosymbionts in one B and one Q Bemisia tabaci biotype was conducted. Kanamycin sulfate, ampicillin trihydrate, and rifampicin were used to investigate the sensitivity of endosymbionts in the two biotypes to antibiotics. The results show that 100% of all individuals of the both biotypes had Portiera. Hamiltonella was also found in both biotypes, with an infection frequency of 91. 7% and 100.0%, respectively. Rickettsia was only detected in 87.5% of the B biotype. Other endosymbionts including Wolbachia, Fritschea, Arsenophonus, and Cardinium were not detected in either biotype. The three antibiotics failed to eliminated Portiera from any individual of the B and Q biotypes

  8. Bioensaios para identificação de biótipos de Euphorbia heterophylla com resistência múltipla a inibidores da ALS e da PROTOX Greenhouse and laboratory bioassays for identification of Euphorbia heterophylla biotypes with multiple resistance to PROTOX and ALS-inhibiting herbicides

    Directory of Open Access Journals (Sweden)

    M.M. Trezzi

    2006-09-01

    Full Text Available Quatro bioensaios, dois em casa de vegetação e dois em laboratório, foram conduzidos com o objetivo de identificar biótipos de Euphorbia heterophylla (EPHHL com resistência múltipla a inibidores da ALS e da PROTOX. Em casa de vegetação, plantas do biótipo suscetível (S e dos biótipos 4 e 23, suspeitos de resistência múltipla, foram aspergidas com diferentes doses de imazethapyr e fomesafen. Nos bioensaios em laboratório, sementes dos biótipos S e 4 foram depositadas em placas de Petri contendo diferentes concentrações dos mesmos herbicidas. Curvas de dose-resposta foram ajustadas, utilizando os modelos logístico e polinomial, respectivamente, para os dados obtidos em casa de vegetação e em laboratório. Em casa de vegetação, o fator de resistência (FR a imazethapyr para o biótipo 4 foi superior a 24, enquanto para o biótipo 23 ele foi de 15. Os FRs a fomesafen foram, respectivamente, de 62 e 39, para os mesmos biótipos. Em um período de 144 horas, concentrações de imazethapyr e fomesafen no bioensaio em laboratório foram capazes de discriminar os crescimentos da parte aérea e radicular dos biótipos de EPHHL com resistência múltipla e S. Os resultados confirmam ser tanto os testes em casa de vegetação quanto os laboratoriais, utilizando placas de Petri, metodologias apropriadas para discriminar biótipos de EPHHL S daqueles com resistência múltipla.Four bioassays were developed under greenhouse and laboratory conditions to identify Euphorbia heterophylla (EPHHL biotypes with multiple resistance to PROTOX and ALS-inhibiting herbicides. In the greenhouse bioassays, plants of a susceptible (S biotype and of two biotypes suspected of multiple resistance (#4 and #23 were sprayed using different levels of the herbicides imazethapyr and fomesafen. The laboratory bioassays consisted of a comparative test between biotypes S and #4, exposed to germination in imazethapyr and fomesafen solutions. Dose

  9. Clinical isolates of Vibrio cholerae O1 El Tor Ogawa of 2009 from Kolkata, India: preponderance of SXT element and presence of Haitian ctxB variant.

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    Braj M R N S Kutar

    Full Text Available BACKGROUND: Increase in the number of multidrug resistant pathogens and the accompanied rise in case fatality rates has hampered the treatment of many infectious diseases including cholera. Unraveling the mechanisms responsible for multidrug resistance in the clinical isolates of Vibrio cholerae would help in understanding evolution of these pathogenic bacteria and their epidemic potential. This study was carried out to identify genetic factors responsible for multiple drug resistance in clinical isolates of Vibrio cholerae O1, serotype Ogawa, biotype El Tor isolated from the patients admitted to the Infectious Diseases Hospital, Kolkata, India, in 2009. METHODOLOGY/PRINCIPAL FINDINGS: One hundred and nineteen clinical isolates of V. cholerae were analysed for their antibiotic resistance phenotypes. Antibiogram analysis revealed that majority of the isolates showed resistance to co-trimoxazole, nalidixic acid, polymixin B and streptomycin. In PCR, SXT integrase was detected in 117 isolates and its sequence showed 99% identity notably to ICEVchInd5 from Sevagram, India, ICEVchBan5 from Bangladesh and VC1786ICE sequence from Haiti outbreak among others. Antibiotic resistance traits corresponding to SXT element were transferred from the parent Vibrio isolate to the recipient E. coli XL-1 Blue cells during conjugation. Double-mismatch-amplification mutation assay (DMAMA revealed the presence of Haitian type ctxB allele of genotype 7 in 55 isolates and the classical ctxB allele of genotype 1 in 59 isolates. Analysis of topoisomerase sequences revealed the presence of mutation Ser83 → Ile in gyrA and Ser85→ Leu in parC. This clearly showed the circulation of SXT-containing V. cholerae as causative agent for cholera in Kolkata. CONCLUSIONS: There was predominance of SXT element in these clinical isolates from Kolkata region which also accounted for their antibiotic resistance phenotype typical of this element. DMAMA PCR showed them to be a mixture

  10. Influence of Additives on the Yield and Pathogenicity of Conidia Produced by Solid State Cultivation of an Isaria javanica Isolate.

    Science.gov (United States)

    Kim, Jeong Jun; Xie, Ling; Han, Ji Hee; Lee, Sang Yeob

    2014-12-01

    Recently, the Q biotype of tobacco whitefly has been recognized as the most hazardous strain of Bemisia tabaci worldwide, because of its increased resistance to some insecticide groups. As an alternative control agent, we selected an Isaria javanica isolate as a candidate for the development of a mycopesticide against the Q biotype of sweet potato whitefly. To select optimal mass production media for solid-state fermentation, we compared the production yield and virulence of conidia between 2 substrates (barley and brown rice), and we also compared the effects of various additives on conidia production and virulence. Barley was a better substrate for conidia production, producing 3.43 × 10(10) conidia/g, compared with 3.05 × 10(10) conidia/g for brown rice. The addition of 2% CaCO3 + 2% CaSO4 to barley significantly increased conidia production. Addition of yeast extract, casein, or gluten also improved conidia production on barley. Gluten addition (3% and 1.32%) to brown rice improved conidia production by 14 and 6 times, respectively, relative to brown rice without additives. Conidia cultivated on barley produced a mortality rate of 62% in the sweet potato whitefly after 4-day treatment, compared with 53% for conidia cultivated on brown rice. The amendment of solid substrate cultivation with additives changed the virulence of the conidia produced; the median lethal time (LT50) was shorter for conidia produced on barley and brown rice with added yeast extract (1.32% and 3%, respectively), KNO3 (0.6% and 1%), or gluten (1.32% and 3%) compared with conidia produced on substrates without additives. PMID:25606006

  11. Biochemical and full genome sequence analyses of clinical Vibrio cholerae isolates in Mexico reveals the presence of novel V. cholerae strains.

    Science.gov (United States)

    Díaz-Quiñonez, José Alberto; Hernández-Monroy, Irma; Montes-Colima, Norma Angélica; Moreno-Pérez, María Asunción; Galicia-Nicolás, Adriana Guadalupe; López-Martínez, Irma; Ruiz-Matus, Cuitláhuac; Kuri-Morales, Pablo; Ortíz-Alcántara, Joanna María; Garcés-Ayala, Fabiola; Ramírez-González, José Ernesto

    2016-05-01

    The first week of September 2013, the National Epidemiological Surveillance System identified two cases of cholera in Mexico City. The cultures of both samples were confirmed as Vibrio cholerae serogroup O1, serotype Ogawa, biotype El Tor. Initial analyses by PFGE and by PCR-amplification of the virulence genes, suggested that both strains were similar, but different from those previously reported in Mexico. The following week, four more cases were identified in a community in the state of Hidalgo, located 121 km northeast of Mexico City. Thereafter a cholera outbreak started in the region of La Huasteca. Genomic analyses of the four strains obtained in this study confirmed the presence of Pathogenicity Islands VPI-1 and -2, VSP-1 and -2, and of the integrative element SXT. The genomic structure of the 4 isolates was similar to that of V. cholerae strain 2010 EL-1786, identified during the epidemic in Haiti in 2010. PMID:26828665

  12. 两种体色生物型桃蚜对杀虫剂敏感性差异及其与酶活力的关系%The sensitivity of two body colour bio-types of the green peach aphid Myzus persicae (Sulzer) (Hemiptera: Aphididae) to the pesticides and its correlation to enzyme activity

    Institute of Scientific and Technical Information of China (English)

    宫亚军; 王泽华; 石宝才; 姜春燕; 康总江; 金桂华; 魏书军

    2013-01-01

    In order to survey the difference of sensitivity to insecticides between the two body colour bio -types of the green peach aphid Myzus persicae (Sulzer) (Hemiptera:Aphididae),the bioassay was conducted in the laboratory,and three detoxifying enzymes and acetylcholinesterase activities of the two colour bio-types were tested.The results showed that the green bio-type was more sensitive to the insecticides than the red bio-type.There was a significant difference in the sensitivity to the imidacloprid between the red bio-type and green bio-type.The LC50 of red bio-type was 23.88 times higher than that of the green bio-type with the value was 679.6648 and 28.4597 mg/L,respectively.The difference of the sensitivity to chlorpyrifos between two body colour bio-types was moderate.The LC50 of red bio-type was 6.35 times higher than that of the green bio-type with the value was 1229.5798 and 193.6816 mg/L,respectively.There was a little difference in the sensitivity to the abamectin between the two body colour bio-types.The LC50 of red bio-type was 1.07 times as much as that of the green bio-type with the value was 31.1678 and 29.0966 mg/L,respectively.The esterase,glutathione-S-transferase and mixed function oxidase specific activity of red bio-type was extraordinarily higher than that of the green bio-type.The esterase,glutathione-S-transferase and mixed function oxidase specific activity of the red bio-type were 3.1,4.1 and 1.5 times as much as that of the green bio-type,respectively,whereas there was no difference in the acetylcholinesterase specific activity between the two body colour bio-types of M.persicae,indicating that the acetylcholinesterase specific activity was not correlate with the sensitivity to the insecticides.%为了明确不同体色生物型桃蚜Myzus persicae(Suizer)对药剂的敏感性差异,本文采用室内生物测定和酶活力测定法检测不同体色生物型桃蚜对杀虫剂的敏感性以及与3种解毒酶和1种靶标酶活力关

  13. Aislamiento de Yersinia enterocolitica y de Yersinia kristensenii en fecas de ovinos Isolation of Yersinia enterocolitica and Yersinia kristensenii from ovine faeces

    Directory of Open Access Journals (Sweden)

    J. ZAMORA

    1997-01-01

    Full Text Available Se analizaron 237 muestras de contenido intestinal de ovinos, de las cuales 147 correspondían a corderos muertos que habían presentado un cuadro diarreico, 48 a corderos vivos sin trastornos entéricos y 42 ovejas sanas. Las muestras se mantuvieron en PBS a 4° C durante un mes, sembrándolas semanalmente en medio para Yersinia, incubándolas a 25° C por 48 h. Unicamente de los corderos que habían presentado diarrea se aislaron 3 cepas de Y. enterocolitica, dos de las cuales pertenecían al biotipo 1 y una al biotipo 2, no se detectó fenotípicamente plásmido de virulencia y no reaccionaron con los antisueros utilizados para su serotipificación. Además, se aislaron 2 cepas de Y. kristensenii. Se discute la eventual importancia que podían tener en patologías entéricas y la conveniencia de investigar la presencia de Y. enterocolitica en casos de aborto ovinoTwo-hundred and thirty seven samples obtained from sheep bowel contents were examined. One hundred and fourty seven samples belonged to diarrhoeic lambs with neonatal death, 40 to clinically healthy lambs and 42 to clinically healthy ewes. Samples were kept in PBS at 4° C during one month and cultured weekly in a Yersinia medium, incubating at 25° C for 48 hours. Three strains of Y. enterocolitica, two of the biotype 1 and one of the biotype 2 were isolated from sick lamb samples. Phenotipically it was not possible to identify the virulent plasmids and no positive reaction to the antiseras used was observed. Two strains of Y. kristensenii were isolated. The importance of Y. enterocolitica in causing enteric pathologies and its importance as a cause of ovine abortion is discussed

  14. Potential Role of Yeast Strains Isolated from Grapes in the Production of Aglianico of Taurasi DOCG

    Directory of Open Access Journals (Sweden)

    Maria eAponte

    2016-05-01

    Full Text Available Twelve samples of Aglianico grapes, collected in different locations of the Taurasi DOCG (Appellation of Controlled and Guaranteed Origin production area were naturally fermented in sterile containers at room temperature. A total of 70 yeast cultures were isolated from countable WL agar plates: 52 in the middle of the fermentation and 18 at the end. On the basis of ITS-RFLP analysis and ITS sequencing, all cultures collected at the end of fermentations were identified as Saccharomyces (S. cerevisiae; while, the 52 isolates, collected after one week, could be referred to the following species: Metschnikowia (M. pulcherrima; Starmerella (Star. bacillaris; Pichia (P. kudriavzevii; Lachancea (L. thermotolerans; Hanseniaspora (H. uvarum; Pseudozyma (Pseud. aphidis; S. cerevisiae. By means of Interdelta analysis, 18 different biotypes of S. cerevisiae were retrieved. All strains were characterized for ethanol production, SO2 resistance, H2S development, β-glucosidasic, esterasic and antagonistic activities. Fermentation abilities of selected strains were evaluated in micro-fermentations on Aglianico must. Within non-Saccharomyces species, some cultures showed features of technological interest. Antagonistic activity was expressed by some strains of M. pulcherrima, L. thermotolerans, P. kudriavzevii and S. cerevisiae. Strains of M. pulcherrima showed the highest β-glucosidase activity and proved to be able to produce high concentrations of succinic acid. L. thermotolerans produced both succinic and lactic acids. The lowest amount of acetic acid was produced by M. pulcherrima and L. thermotolerans; while the highest content was recorded for H. uvarum. The strain of Star. bacillaris produced the highest amount of glycerol and was able to metabolize all fructose and malic acid. Strains of M. pulcherrima and H. uvarum showed a low fermentation power (about 4%, while, L. thermotolerans, Star. bacillaris and P. kudriavzevii of about 10%. Significant

  15. Development of species-specific PCR primers and polyphasic characterization of Lactobacillus sanfranciscensis isolated from Korean sourdough.

    Science.gov (United States)

    Lee, Hyeongrho; Baek, Hyunwook; Lim, Sae Bom; Hur, Jin Soo; Shim, Sangmin; Shin, So-Yeon; Han, Nam Soo; Seo, Jin-Ho

    2015-05-01

    Lactobacillus sanfranciscensis is a bacterium used in sourdough that provides desirable properties such as better flavor and texture to the sourdough bread. Here, the intra-species diversity of L. sanfranciscensis strains isolated from Korean sourdough was studied using genotypic (multiplex-RAPD-PCR: multiplex-Randomly Amplified Polymorphic DNA-polymerase chain reaction) and phenotypic (VITEK2 Compact system) analyses. For this, a novel species-specific set of PCR primers was developed to identify L. sanfranciscensis using the recently published genome database. The primers were able to detect L. sanfranciscensis isolated from Korean sourdough with 100% accuracy. Genotyping and phenotyping analyses at the strain level demonstrated that Korean sourdough possesses various biotypes of L. sanfranciscensis strains. These strains were clustered into 5 subtypes (genotyping) or 7 subtypes (phenotyping). In summary, this strategy to construct novel primers reduced the chance of cross amplification and was able to identify the desired strain. The various strains isolated in this study can be used to develop a sourdough starter after the analysis of their fermentation characteristics.

  16. Development of species-specific PCR primers and polyphasic characterization of Lactobacillus sanfranciscensis isolated from Korean sourdough.

    Science.gov (United States)

    Lee, Hyeongrho; Baek, Hyunwook; Lim, Sae Bom; Hur, Jin Soo; Shim, Sangmin; Shin, So-Yeon; Han, Nam Soo; Seo, Jin-Ho

    2015-05-01

    Lactobacillus sanfranciscensis is a bacterium used in sourdough that provides desirable properties such as better flavor and texture to the sourdough bread. Here, the intra-species diversity of L. sanfranciscensis strains isolated from Korean sourdough was studied using genotypic (multiplex-RAPD-PCR: multiplex-Randomly Amplified Polymorphic DNA-polymerase chain reaction) and phenotypic (VITEK2 Compact system) analyses. For this, a novel species-specific set of PCR primers was developed to identify L. sanfranciscensis using the recently published genome database. The primers were able to detect L. sanfranciscensis isolated from Korean sourdough with 100% accuracy. Genotyping and phenotyping analyses at the strain level demonstrated that Korean sourdough possesses various biotypes of L. sanfranciscensis strains. These strains were clustered into 5 subtypes (genotyping) or 7 subtypes (phenotyping). In summary, this strategy to construct novel primers reduced the chance of cross amplification and was able to identify the desired strain. The various strains isolated in this study can be used to develop a sourdough starter after the analysis of their fermentation characteristics. PMID:25702881

  17. Resistência de biótipos de Euphorbia heterophylla l. Aos herbicidas inibidores da enzima ALS utilizados na cultura de soja Resistance of Euphorbia heterophylla l. Biotypes to ALS enzyme inhibitor herbicides used in soybean crop

    Directory of Open Access Journals (Sweden)

    GERSON AUGUSTO GELMINI

    2001-01-01

    induce selection of resistant biotypes, such as occurred to Euphorbia heterophylla L. in relation to ALS enzyme inhibitors, in areas of the Paraná and Rio Grande do Sul States, in Brazil. In order to verify possible new cases of resistant populations and to test alternative herbicide treatments to manage this population, seeds of E. heterophylla were collected in the Assis region, State of São Paulo, Brazil, in areas where plants of this species had survived to continuous herbicides application. The trial was carried out in glasshouse conditions where biotypes with a history of suspected resistance were compared with a known susceptible biotype. The study used several post-emergence herbicides sprayed at zero, one, two, four and eight times the recommended field application rates of these products. Twenty days after application, the plants were harvested and the percentage of control and the fresh weight were determined to establish the dose-response curves, to get the resistance factor using data of DL50 and GR50 and to verify if there was a multiple resistance. The resistant biotype showed different resistance levels to chlorimuron-ethyl and imazethapyr, showing cross-resistance to sulfonylurea and imidazolinone groups. Nevertheless, this biotype was efficiently controlled by fomesafen (250 g.ha-1, lactofen (120 g.ha-1, flumiclorac-pentil (40 g.ha-1, ammonium-gluphosinate (150 g.ha-1 and glyphosate (360 g.ha-1.

  18. Differential reactions of soybean isolines with combinations of aphid resistance genes Rag1, Rag2, and Rag3 to four soybean aphid biotypes

    Science.gov (United States)

    With the discovery of the soybean aphid (Aphis glycines Matsumura) as a devastating insect pest of soybean (Glycine max (L.) Merr.) in the United States, host resistance was recognized as an important management option. However, the identification of soybean aphid isolates exhibiting strong virulenc...

  19. Efficiency of neem oil nanoformulations to Bemisia tabaci (GENN.) Biotype B (Hemiptera: Aleyrodidae)
    Eficiência de nanoformulações a base de óleo de nim sobre Bemisia tabaci (GENN.) Biótipo B (Hemiptera: Aleyrodidae)

    OpenAIRE

    Sheila Salles de Carvalho; José Djair Vendramim; Rafael Major Pitta; Moacir Rossi Forim

    2012-01-01

    The nanotechnology, through encapsulation of active ingredients, has showed an important way to avoid problems with quickly degradation of the pesticide molecules. Thus, neem (Azadirachta indica) oil nanoformulations containing ?-ciclodextrin and poli-?-caprolactone (PCL) were tested as to their control efficiency against eggs and nymphs of Bemisia tabaci (Genn.) biotype B reared in soybean. The Lethal Concentration (LC50) was estimated using a commercial neem oil (Organic Neem®) on first-ins...

  20. Understand Quarantine and Isolation

    Science.gov (United States)

    ... Social Media What CDC is Doing Blog: Public Health Matters What's New Preparation & Planning Emergency Preparedness and Response Understand Quarantine and Isolation Recommend on Facebook Tweet Share Compartir Isolation and quarantine help protect the public by ...

  1. Toxicity of spirotetramat to Bemisia tabaci biotype B and the impact on the biological parameters%螺虫乙酯对B型烟粉虱毒力及部分生物学参数的影响

    Institute of Scientific and Technical Information of China (English)

    戈大庆; 姜兴印; 王燕; 李俊虎; 段强

    2011-01-01

    In order to value the bioactivity and impact on the biology of spirotetramat against Bemisia tabaci biotype B, the toxicity of spirotetramat and imidacloprid (control agent) to different instar nymphs of B. tabaci biotype B and the effects of the longevity, fecundity and eggs hatchability were measured in the laboratory by using egg-dipping and leaf-dipping. The toxicity of the 2nd instar nymph is high after treatment by spirotetramat, the LCso was 4.07 mg/L, it was 2.73 times to the toxicity of imidacloprid, toxicity was low to the eggs and adults, and lower than that of imidacloprid. Longevity of the B. tabaci biotype B was 17.3 days after treatment with 12.5 mg/L spirotetramat, it was significantly shorted compared with the contrast experiment (treatment without pesticides), while imidacloprid was insignificant. The fecundity was 5 and the eggs hatching rate was 3.23% after treatment with 12.5 mg/L spirotetramat, which has significantly inhibition to the fecundity and the eggs hatching, and it was significantly lower than those treated with imidacloprid and the contrast experiment. It was no significant differences between imidacloprid and the contrast experiment. The repellent action was 52% to the adults of spirotetramat after 24 h treated with 100 mg/L spirotetramat, and the repellent action was not very good.%为系统评价新药剂螺虫乙酯(spirotetramat)对B型烟粉虱(Bem isia tabacibiotype B)的生物活性及生物学参数的影响,采用浸渍法测定了螺虫乙酯及对照药剂吡虫啉对B型烟粉虱各个虫态的室内毒力、成虫寿命、产卵量及所产卵孵化率的影响。结果表明,螺虫乙酯对2龄若虫毒力最高,LC50为4.07mg/L,为吡虫啉的2.73倍,对卵及成虫毒力较低,且显著低于吡虫啉;12.5 mg/L螺虫乙酯处理后,成虫寿命为17.3天,较空白对照显著缩短,吡虫啉与空白对照无显著差异;12.5mg/L螺虫乙酯处理后平均产卵量为5.0粒,所

  2. Main: PYRIMIDINEBOXOSRAMY1A [PLACE

    Lifescience Database Archive (English)

    Full Text Available PYRIMIDINEBOXOSRAMY1A S000259 19-August-2004 (last modified) kehi Pyrimidine box fo...und in rice (O.s.) alpha-amylase (RAmy1A) gene; Gibberellin-respons cis-element of GARE and pyrimidine box a...ically to this site; See S000265; alpha-amylase; sugar repression; GARE; pyrimidine box; feed-back metabolic

  3. [Morphological and biochemical features of fungi isolated from patients with renal failure].

    Science.gov (United States)

    Drozdowska, Agata

    2007-01-01

    Patients with renal failure are more frequently at risk of fungal infections than the healthy individuals. The aim of the study was: (1) Evaluation of the prevalence of fungi in biological materials obtained from different ontocenoses from patients with end-stage and chronic renal failure undergoing haemodialysis and conservative treatment, respectively. (2) Species determining of isolated fungal strains and evaluation their morphological and biochemical features with regard to biotyping. (3) Examining the connection between intraspecies features of fungal strains isolated from different ontocenoses of the same patient. The study group comprised 136 persons, including 56 patients with end-stage renal failure dialysed for the mean period of 36.2 (+/- 1.62) months--all patients were on chronic haemodialysis therapy (4 hours sessions, 3 times per week), 50 patients with chronic renal failure undergoing conservative treatment and 30 persons with the negative history of any renal disease--control group. At the moment of the evaluation and collection of samples all patients were in good condition, none of the patients revealed symptoms suggesting possible fungal infection. Material for mycological examinations included washings from the oral cavity and samples of urine and faeces. In order to evaluate morphological and biochemical features of fungi the following methods were applied: (1) macrocultures in solid Sabouraud medium, (2) direct microscopic slides, (3) API 20 C AUX test and (4) API ZYM test (bioMérieux). Totally 385 samples for mycological examinations were collected from different ontocenoses, from which 161 fungal strains were isolated and classified to 17 species from 5 genera. Most strains belonged to the genus Candida 96.9% and the most frequently occurring species was C. albicans (60.3%). Other species from this genus composed 39.7%, among which in 11.8% of cases C. parapsilosis was determined, and the following were: C. guilliermondii and C. humicola

  4. Análisis de la sensibilidad de biotipos de Lolium multiflorum a herbicidas inhibidores de la enzima ALS, ACCasa y Glifosato Sensitivity analysis of Lolium multiflorum biotypes to Glyphosate, ACCase and ALS-inhibiting herbicides

    Directory of Open Access Journals (Sweden)

    P. Diez De Ulzurrun

    2012-09-01

    . multiflorum of Loberia (Buenos Aires, Argentina. Bioassays were conducted in Petri dishes and the GR50 was determined by the length of coleoptile. Curves dose-response were obtained using the log-logistic equation. The LmR biotype survived under multiple herbicides of three different modes of action, glyphosate, ALS and ACCase inhibitors. This test showed the appearance of a biotype of L. multiflorum with resistance to multiple active ingredients.

  5. Controle químico de ovos e ninfas de Bemisia tabaci biótipo B (Hemiptera: aleyrodidae Chemical control of Bemisia tabaci B biotype (Hemiptera: aleyrodidae eggs and nymphs

    Directory of Open Access Journals (Sweden)

    Giuliana Etore do Valle

    2002-06-01

    Full Text Available Moscas brancas são pragas de diversas culturas, causam redução na produção e na qualidade do produto. Inseticidas, com diferentes modos de ação vêm sendo utilizados, sem muito sucesso. Neste trabalho avaliou-se a eficiência de inseticidas sobre ovos de diferentes idades (1, 3 e 5 dias e de ninfas de 1° ínstar da mosca branca Bemisia tabaci biótipo B. Os experimentos foram realizados em condições de laboratório, sob temperatura de 25 ± 2°C e fotofase de 12 horas. Piriproxifem (75 mg L-1 atuou como excelente ovicida, sendo altamente eficiente, 3 dias de idade. Cartape (500 mg L-1 não teve efeito satisfatório, mas a 1000 mg L-1 foi eficiente em ovos com até 5 dias de idade. Quanto à ação sobre ninfas de 1° ínstar, para pulverizações na face superior das folhas, piriproxifem, a 75 mg L-1, apresentou eficiência na supressão da emergência de adultos, caracterizando presença de ação translaminar; buprofezim, cartape, acefato e fempiroximate não apresentaram eficiência no controle de ninfas. Quando aplicado na face inferior das folhas, buprofezim (375 mg L-1 apresentou eficiência comparável à de piriproxifem, impedindo a emergência de adultos.Whiteflies are pests of many crops, cause severe yield losses and reduce crop quality. Insecticides of different modes of action have been used without success. In this work, the efficiency of five insecticides on Bemisia tabaci B biotype (= B. argentifolii eggs and nymphs was evaluated under laboratory conditions (T = 25 ± 2°C; 12 h photophase. In relation to the ovicidal effect, pyriproxyfen (75 mg L-1 caused egg hatching inhibition up to three day old eggs. Cartap showed efficiency only at the concentration of 1000 mg L-1, supressing the viability of eggs up to five days. Soybean leaves with first instar nymphs were treated in the upper surface with pyriproxyfen (75 mg L-1, buprofezin (375 mg L-1, cartap (1000 mg L-1, acephate (750 mg L-1 and fenpyroximate (100 mg L-1; in

  6. Cholera outbreak caused by drug resistant Vibrio cholerae serogroup O1 biotype ElTor serotype Ogawa in Nepal; a cross-sectional study

    OpenAIRE

    Gupta, Pappu Kumar; Pant, Narayan Dutt; Bhandari, Ramkrishna; Shrestha, Padma

    2016-01-01

    Background Cholera is a major cause of mortality and morbidity in underdeveloped countries including Nepal. Recently drug resistance in Vibrio cholerae has become a serious problem mainly in developing countries. The main objectives of our study were to investigate the occurrence of Vibrio cholerae in stool samples from patients with watery diarrhea and to determine the antimicrobial susceptibility patterns of V. cholerae isolates. Methods A total of 116 stool samples from patients suffering ...

  7. 农药胁迫对2种体色型麦长管蚜生长发育和繁殖的影响%Effect of pesticide stress on the development and reproduction of different body-color biotypes of Sitobion avenae (Fab.)

    Institute of Scientific and Technical Information of China (English)

    亢菊侠; 惠凯凯; 胡祖庆

    2011-01-01

    【Objective】 Effects of pesticide stress on different body-color biotypes of colors of aphids were studied to provide theoretical basis for genetic inheritance and evolution.【Method】 Under strict controlled conditions in artificial bioclimatic chamber,new-born nymph of red and green biotypes of Sitobion avenae were placed on wheat treated under pesticide stress.Their impacts on biological characteristics of aphids(development duration(T),weight difference,mean relative growth rate(MRGR),mean generation time,net reproduction rate and intrinsic rate of increase) were subsequently measured.【Result】 The results illustrated that under pesticide stress,as the dose of omethoate and imidacloprid increased,the two body-color biotype of wheat aphid developmental duration and the mean generation time were increased,but the weight differences,the relative growth rate of average daily body weight,net reproductive rate and intrinsic growth rate were reduced.【Conclusion】 Under pesticide stress,the two body-color biotypes reproduction of aphid was reduced,and the green biotype was more sensitive than the red one.%【目的】研究农药胁迫对不同体色型麦长管蚜生长发育和繁殖的影响,为蚜虫生态遗传与进化提供理论依据。【方法】在不同剂量氧化乐果、吡虫啉农药胁迫下,于人工气候箱中饲养2种不同体色型(红色型和绿色型)麦长管蚜(Sitobion avenae Fab.)初生若蚜,分别测定各处理麦长管蚜的发育历期、体质量差、相对日均体质量增长率、种群平均世代周期、净增殖率及内禀增长率等生长发育和繁殖生物学参数。【结果】随着氧化乐果和吡虫啉施用剂量的增加,2种体色型麦长管蚜的发育历期、种群平均世代周期均增加,且绿色型麦长管蚜增加幅度比

  8. Biotype distribution and phylogenetic analysis of Bemisia tabaci populations in main cotton planting areas in Hubei Province%湖北省棉花主产区烟粉虱生物型分布及系统发育分析

    Institute of Scientific and Technical Information of China (English)

    周新改; 马伟华; 刘美刚; 杨小红; 王沫

    2011-01-01

    [Objective] To understand the biotypes of Bemisia tabaci of cotton in main planting areas of Wuhan, Jingzhou, Xiaogan, Suizhou and Wuxue in Hubei Province. [Method] In this study, PCR-RFLP of mtCOI and gene sequencing method were used to identify the biotypes of whitefly field populations from main cotton planting areas in Hubei Province, and phylogenetic analysis of them was also conducted. [Result] The Q biotype was dominant in the field populations, while the B biotype was dominant in greenhouse populations. In addition, ZHJ1 biotype was also identified in Wuxue population. Phylogenetic analysis showed that populations from main cotton planting areas in Hubei Province were always homologous with populations from most other provinces in China. [Conclusion] The results may provide a reference for the control of B. Tabaci in Hubei Province.%[目的]明确武汉、荆州、孝感、随州、武穴5个棉花主产区烟粉虱生物型组成.[方法]通过以线粒体细胞色素氧化酶Ⅰ(mitochondrial cytochrome oxidase I,mtCOI)为基础的PCR-RFLP和基因测序的方法,鉴定湖北5个棉花主产区烟粉虱地理种群的生物型组成,并分析5个地理种群与其他省种群的系统发育关系.[结果]Q型烟粉虱为湖北省棉花主产区的优势种群,而武汉温室种群则均为B型烟粉虱,土著生物型ZHJ1型在大田中略有分布;系统发育分析表明,湖北省棉花主产区B型和Q型烟粉虱种群均与中国其他多个省的烟粉虱种群亲缘关系较近.[结论]本文研究结果可以为湖北省5个棉花主产区烟粉虱的有效防治提供参考.

  9. Major Shift of Toxigenic V. cholerae O1 from Ogawa to Inaba Serotype Isolated from Clinical and Environmental Samples in Haiti

    Science.gov (United States)

    Alam, Meer T.; Ray, Shrestha S.; Chun, Camille N.; Chowdhury, Zahara G.; Rashid, Mohammed H.; Madsen Beau De Rochars, Valery E.; Ali, Afsar

    2016-01-01

    In October of 2010, an outbreak of cholera was confirmed in Haiti for the first time in more than a century. A single clone of toxigenic Vibrio cholerae O1 biotype El Tor serotype Ogawa strain was implicated as the cause. Five years after the onset of cholera, in October, 2015, we have discovered a major switch (ranging from 7 to 100%) from Ogawa serotype to Inaba serotype. Furthermore, using wbeT gene sequencing and comparative sequence analysis, we now demonstrate that, among 2013 and 2015 Inaba isolates, the wbeT gene, responsible for switching Ogawa to Inaba serotype, sustained a unique nucleotide mutation not found in isolates obtained from Haiti in 2012. Moreover, we show that, environmental Inaba isolates collected in 2015 have the identical mutations found in the 2015 clinical isolates. Our data indicate that toxigenic V. cholerae O1 serotype Ogawa can rapidly change its serotype to Inaba, and has the potential to cause disease in individuals who have acquired immunity against Ogawa serotype. Our findings highlight the importance of monitoring of toxigenic V. cholerae O1 and cholera in countries with established endemic disease. PMID:27716803

  10. Laboratory characterization of invasive Haemophilus influenzae isolates from Nunavut, Canada, 2000–2012

    Science.gov (United States)

    Tsang, Raymond S. W.; Li, Y. Anita; Mullen, Angie; Baikie, Maureen; Whyte, Kathleen; Shuel, Michelle; Tyrrell, Gregory; Rotondo, Jenny A. L.; Desai, Shalini; Spika, John

    2016-01-01

    Background With invasive Haemophilus influenzae serotype b (Hib) disease controlled by vaccination with conjugate Hib vaccines, there is concern that invasive disease due to non-serotype b strains may emerge. Objective This study characterized invasive H. influenzae (Hi) isolates from Nunavut, Canada, in the post-Hib vaccine era. Methods Invasive H. influenzae isolates were identified by conventional methods at local hospitals; and further characterized at the provincial and federal public health laboratories, including detection of serotype antigens and genes, multi-locus sequence typing and antibiotic susceptibility. Results Of the 89 invasive H. influenzae cases identified from 2000 to 2012, 71 case isolates were available for study. There were 43 serotype a (Hia), 12 Hib, 2 Hic, 1 Hid, 1 Hie, 2 Hif and 10 were non-typeable (NT). All 43 Hia were biotype II, sequence type (ST)-23. Three related STs were found among the Hib isolates: ST-95 (n=9), ST-635 (n=2) and ST-44 (n=1). Both Hif belonged to ST-124 and the 2 Hic were typed as ST-9. The remaining Hid (ST-1288) and Hie (ST-18) belonged to 2 separate clones. Of the 10 NT strains, 3 were typed as ST-23 and the remaining 7 isolates each belonged to a unique ST. Eight Hib and 1 NT-Hi were found to be resistant to ampicillin due to β-lactamase production. No resistance to other antibiotics was detected. Conclusion During the period of 2000–2012, Hia was the predominant serotype causing invasive disease in Nunavut. This presents a public health concern due to an emerging clone of Hia as a cause of invasive H. influenzae disease and the lack of published guidelines for the prophylaxis of contacts. The clonal nature of Hia could be the result of spread within an isolated population, and/or unique characteristics of this strain to cause invasive disease. Further study of Hia in other populations may provide important information on this emerging pathogen. No antibiotic resistance was detected among Hia isolates; a

  11. 两种MALDI-TOF质谱仪对临床分离细菌鉴定结果的比较%Evaluation of two MALDI-TOF MS systems for the identification of clinically relevent isolated bacteria

    Institute of Scientific and Technical Information of China (English)

    孟冬娅; 任微; 罗艳萍; 任晓庆; 杨继勇; 褚美玲; 盛翔宇; 薛文成

    2014-01-01

    Objective Two commercially available MALDI-TOF MS systems, Bruker MS (Bruker Daltonics, Bremen, Germany) and Vitek-MS (bioMérieux, Marcy-l’Etoile, France) were compared for the identiifcation of clinically relevant bacteria. Methods A selection of 238 clinical isolates tested in this study, representing 40 different genus and 81 different species, were isolated between January 2011 and June 2013 from General Hospital of Shenyang Military Area Command and grouped into common group (149 cases) and infrequent group (89 cases) isolates according to their relative frequency of yearly occurrence in our routine laboratory identification. All isolates were analyzed in parallel by two MALDI-TOF-MS systems, which was compared with the identiifcation by traditional biochemical test system (compact Vitek2, bioMérieux). Discordant results among the three systems were resolved with 16 S rDNA gene sequencing. Results For the 238 isolates, correct genus identiifcation was achieved for 95%of isolates by Bruker Biotype and for 90%by Vitek-MS, correct species identiifcation were provided for 91%and 87%, respectively, absence of identification occurred in 11 and 21 isolates, respectively. For the 149 common isolates, Bruker Biotyper achieved a correct genus and species identification for 98% and 96%, respectively, Vitek-MS generated a correct genus and species identification for 97% and 95% isolates, respectively. For the 89 infrequent isolates, Bruker Biotyper and Vitek-MS generated accurate genus level identification for 90% and 79%isolates, respectively, accurate species level identiifcation for 83%and 73%isolates, respectively, and absent identiifcation for 8 and 16 isolates, respectively. Conclusions Bruker Biotyper system performed slightly better than Vitek-MS for genus level identification of these isolates. There was no significant difference between the two systems for species level identification. However, the Bruker Biotyper outperformed the Vitek-MS for genue level

  12. Monetarism Beyond M1A

    OpenAIRE

    Pablo García; Rodrigo O. Valdés

    2004-01-01

    This work analyzes, from an empirical standpoint, the information contained in the M1A aggregate in Chile and compares it with other aggregates. The findings reveal that, at least for now, the M1A aggregate does not seem to have particularly valuable information that would make it a better indicator of inflationary pressures within the monetary policy decision horizon. This is consistent with the practice that central banks followed in the past, when they used quantitative targets for money a...

  13. 短时高温暴露对Q型烟粉虱成虫存活和生殖适应性的影响%Effects of Brief Exposure to High Temperature on Survival and Fecundity of Bemisia tabaci Q-biotype(Homoptera: Aleyrodidae)

    Institute of Scientific and Technical Information of China (English)

    崔旭红; 徐建信; 李晓宇; 蔡冲

    2011-01-01

    The effects of brief exposure to high temperature on survival and fecundity of Bemisia tabaci Q-biotype, (Homoptera: Aleyrodidae) were studied in the laborary condition to understand occasional changes in the biological characteristic of whitefly species encountered high temperature stress. The survival rate,reproduction and survival rate from egg to adult of F1 progeny of B. tabaci Q-biotype were evaluated after the adults were exposed to five degrees of temperature, 37, 39, 41, 43, 45℃, for 1 hour. The survival rates of adults of B. tabaci Q-biotype decreased with the increase of temperature. Within the range of 37℃ to 45℃, the survival rate of B. tsbaci Q-Biotype adults decreased from 100% to 21.4%,. Adult survival was significantiy affected when they were exposed at 41℃ or higher temperature. Female oviposition was not significantly different when adults were heat-exposured at all temperatures. However, the total survival rate from egg to adult of F1 progeny that produced by heated adults of B. tabaci Q-biotype decreased from 71.3% to 31.3%.The percentages of F1 offspring developing to adults were significantly affected when temperature increased to 41℃.The adults of B. tabaci Q-biotype has strong adaptability to high temperature, which could facilitate the population of B. tabaci Q-Biotype development in hot seasons%为了明确短时高温暴露对Q型烟粉虱成虫存活及生殖适应性的影响,将Q型烟粉虱成虫在不同温度(37、39、41、43、45℃)下暴露l h后研究了成虫存活率、产卵量及F1代存活率的变化.结果表明,Q型烟粉虱在37~45℃范围内暴露1 h后,成虫存活率由100%下降到21.4%,41℃及以上高温对Q型烟粉虱成虫存活率有显著影响;高温暴露后Q型烟粉虱成虫产卵量与对照相比没有显著差异,但F1代的存活率随着暴露温度的升高由71.3%下降到31.3%,在41℃及以上高温下暴露1 h后Q型烟粉虱F1的存活率显著下降.Q型烟粉虱对高

  14. Oviposition behavior of the silver leaf whitefly Bemisia tabaci biotype B on tomato; Comportamento de oviposicao da mosca-branca Bemisia tabaci (Genn.) (Hemiptera: Aleyrodidae) biotipo B em tomateiro

    Energy Technology Data Exchange (ETDEWEB)

    Vendramim, Jose D. [Universidade de Sao Paulo (USP), Piracicaba, SP (Brazil). Escola Superior de Agricultura Luiz de Queiroz (ESALQ). Dept. de Entomologia, Fitopatologia e Zoologia Agricola]. E-mail: jdvendra@esalq.usp.br; Souza, Antonio P. de [Universidade Federal de Mato Grosso do Sul (UFMS), Campo Grande, MS (Brazil). Dept. de Morfofisiologia. Lab. de Anatomia Humana]. E-mail: apsouza@nin.ufms.br; Ongarelli, Maria das G. [Universidade de Sao Paulo (USP), Piracicaba, SP (Brazil). Escola Superior de Agricultura Luiz de Queiroz (ESALQ). Lab. de Fisiologia e Bioquimica Pos-Colheita]. E-mail: mgong@esalq.usp.br

    2009-01-15

    The objective of this work was to evaluate the influence of the leaf surface, the insect geotropic behavior and the type of foliar trichome on Bemisia tabaci (Genn.) biotype B oviposition on tomato leaves. Bemisia tabaci females were confined in acrylic boxes in which tomato leaflets were fixed at the bottom and top part of the boxes to allow insects to access the leaf surface to be tested (adaxial and/or abaxial) in both no-choice and free choice tests. Oviposition was always higher when the leaf was offered at the top of the box and preferably at the abaxial leaf surface. The effects of leaf trichomes (glandular and non glandular) on B. tabaci oviposition was evaluated by offering the abaxial surface of tomato leaflets to females after a 70% ethanol wash to remove glandular exsudates against a control treatment (without a ethanol wash). Oviposition was concentrated mostly near to non glandular trichomes, showing whitefly females can discriminate among the trichomes. (author)

  15. Factors affecting oviposition of Bemisia tabaci (Genn.) biotype B (Hemiptera: Aleyrodidae) in sweet pepper; Fatores que afetam a oviposicao de Bemisia tabaci (Genn.) biotipo B (Hemiptera: Aleyrodidae) em pimentao

    Energy Technology Data Exchange (ETDEWEB)

    Lima, Larissa C. de; Campos, Alcebiades R. [UNESP, Ilha Solteira, SP (Brazil). Dept. de Fitossanidade, Engenharia Rural e Solos]. E-mail: lclima@aluno.feis.unesp.br; campos@bio.feis.unesp.br

    2008-03-15

    Bemisia tabaci (Gen.) biotype B is considered a pest of economical importance for several vegetables. The oviposition behaviour of the while fly was evaluated in sweet pepper plants. The trials were carried out under greenhouse condition and in the Laboratory of Entomology of DEFERS/ UNESP, Campus of Ilha Solteira-SP, with the sweet pepper Magali-R genotype. The effect of plant age on the whitefly oviposition was evaluated in free-choice tests, in plants, 25, 30, 35, 40 and 45- day-old, as egg distribution in the plant and on the leaf blade was evaluated in 35-days-old plants. In a no-choice tests, 35-day-old plants were used to evaluate the effect of the densities of 50, 100, 150, 200 and 250 adults per plant on the number of eggs laid by insects. The silver leaf whitefly preferred to oviposition the third to sixth leaflets, of the medium and superior part of plants of sweet pepper; the leaf blade areas, located in the lobes right and left close the base of the leaf were the preferential site for whitefly oviposition. Older plants, 40- and 45-day-old, were preferentially used for oviposition, and 200 and 250 adults per plant were both enough to lay a number of eggs that allowed to differentiate among sweet pepper genotypes with different whitefly resistance levels. (author)

  16. Mutation and premating isolation.

    Science.gov (United States)

    Woodruff, R C; Thompson, J N

    2002-11-01

    While premating isolation might be traceable to different genetic mechanisms in different species, evidence supports the idea that as few as one or two genes may often be sufficient to initiate isolation. Thus, new mutation can theoretically play a key role in the process. But it has long been thought that a new isolation mutation would fail, because there would be no other individuals for the isolation-mutation-carrier to mate with. We now realize that premeiotic mutations are very common and will yield a cluster of progeny carrying the same new mutant allele. In this paper, we discuss the evidence for genetically simple premating isolation barriers and the role that clusters of an isolation mutation may play in initiating allopatric, and even sympatric, species divisions.

  17. Use of Posttranscription Gene Silencing in Squash to Induce Resistance against the Egyptian Isolate of the Squash Leaf Curl Virus.

    Science.gov (United States)

    Taha, Omnia; Farouk, Inas; Abdallah, Abdelhadi; Abdallah, Naglaa A

    2016-01-01

    Squash leaf curl virus (SqLCV) is a bipartite begomovirus affecting squash plants. It is transmitted by whitefly Bemisia tabaci biotype B causing severe leaf curling, vein banding, and molting ending by stunting. In this study full-length genomic clone of SqLCV Egyptian isolated and posttranscriptional gene silencing (PTGS) has been induced to develop virus resistance. The Noubaria SqLCV has more than 95% homology with Jordon, Israel, Lebanon, Palestine, and Cairo isolates. Two genes fragment from SqLCV introduced in sense and antisense orientations using pFGC5049 vector to be expressed as hairpin RNA. The first fragment was 348 bp from replication associated protein gene (Rep). The second fragment was 879 bp representing the full sequence of the movement protein gene (BC1). Using real-time PCR, a silencing record of 97% has been recorded to Rep/TrAP construct; as a result it has prevented the appearance of viral symptoms in most tested plants up to two months after infection, while construct containing the BC1 gene scored a reduction in the accumulation of viral genome expression as appearing in real-time PCR results 4.6-fold giving a silencing of 79%, which had a positive effect on symptoms development in most tested plants. PMID:27034922

  18. Genetics Home Reference: isolated growth hormone deficiency

    Science.gov (United States)

    ... deficiency dwarfism, pituitary growth hormone deficiency dwarfism isolated GH deficiency isolated HGH deficiency isolated human growth hormone deficiency isolated somatotropin deficiency isolated somatotropin deficiency disorder ...

  19. MALDI-TOF MS as a Tool To Detect a Nosocomial Outbreak of Extended-Spectrum-β-Lactamase- and ArmA Methyltransferase-Producing Enterobacter cloacae Clinical Isolates in Algeria.

    Science.gov (United States)

    Khennouchi, Nour Chems el Houda; Loucif, Lotfi; Boutefnouchet, Nafissa; Allag, Hamoudi; Rolain, Jean-Marc

    2015-10-01

    Enterobacter cloacae is among the most important pathogens responsible for nosocomial infections and outbreaks. In this study, 77 Enterobacter isolates were collected: 27 isolates from Algerian hospitals (in Constantine, Annaba, and Skikda) and 50 isolates from Marseille, France. All strains were identified by matrix-assisted laser desorption ionization-time of flight mass spectrometry (MALDI-TOF MS). Antibiotic susceptibility testing was performed by the disk diffusion method. PCR was used to detect extended-spectrum-beta-lactamase (ESBL)-encoding, fluoroquinolone resistance-encoding, and aminoglycoside-modifying enzyme (AME) genes. Epidemiological typing was performed using MALDI-TOF MS with data mining approaches, along with multilocus sequence typing (MLST). Sixty-eight isolates (27 from Algeria, 41 from Marseille) were identified by MALDI-TOF MS as E. cloacae. Resistance to antibiotics in the Algerian isolates was significantly higher than that in the strains from Marseille, especially for beta-lactams and aminoglycosides. Eighteen of the 27 Algerian isolates and 11 of the 41 Marseille isolates possessed at least one ESBL-encoding gene: blaCTX-M and/or blaTEM. AME genes were detected in 20 of the 27 Algerian isolates and 8 of the 41 Marseille isolates [ant(2″)-Ia, aac(6')-Ib-cr, aadA1, aadA2, and armA]. Conjugation experiments showed that armA was carried on a transferable plasmid. MALDI-TOF typing showed three separate clusters according to the geographical distribution and species level. An MLST-based phylogenetic tree showed a clade of 14 E. cloacae isolates from a urology unit clustering together in the MALDI-TOF dendrogram, suggesting the occurrence of an outbreak in this unit. In conclusion, the ability of MALDI-TOF to biotype strains was confirmed, and surveillance measures should be implemented, especially for Algerian patients hospitalized in France. PMID:26239991

  20. Alternativ isolering i bygninger

    DEFF Research Database (Denmark)

    Andersen, T.; Skibstrup Eriksen, S.

    Denne SBI-meddelelse beskriver resultaterne af en undersøgelse af bygninger, hvor der er anvendt alternativ isolering. Undersøgelsen omfatter termografering og fugtmåling af udvendige bygningsdele isoleret med alternativ isolering. Endvidere rapporteres resultaterne af målinger af indholdet af tu...

  1. Physical and transcriptional map in the CMT 1A region

    Energy Technology Data Exchange (ETDEWEB)

    Chevillard, C.; Passage, E.; Cudrey, C. [INSERM Marseille (France)] [and others

    1994-09-01

    The Charcot-Marie-Tooth disease type 1A (CMT1A) has been mapped to the proximal short arm of chromosome 17. CMT1A is the most frequent of the motor and sensory peripheral neuropathies and is associated with a duplication of a 1.5 Mb fragment in proximal 17p12. Several groups have proposed that the gene coding for peripheral myelin protein-22 (PMP-22) as the candidate gene for CMT1A. We have recently published a {open_quote}MegaYAC{close_quote} contig of 6 Mb which covers the CMT1A critical region. In order to isolate new genes localized in this region, we used a {open_quote}physical trapping {close_quote} strategy derived from the direct cDNA selection technique developed by Parimoo et al. This approach has allowed us to construct cDNA {open_quotes}minilibraries{close_quotes} using YAC DNA from the CMT1A region. One of the clones in these minilibraries has been mapped back to the CMT1A duplication. Other potentially interesting clones are in the process of further characterization. Furthermore, we have mapped several Genethon microsatellites in the 6 Mb YAC contig and some are located in the CMT1A duplicated region. These highly polymorphic markers should prove useful for diagnostic testing in CMT1A.

  2. Caracterização de biótipos de arroz-vermelho em lavouras de arroz no estado do Rio Grande do Sul Characterization of red rice biotypes in rice fields in the State of Rio Grande do Sul - Brazil

    Directory of Open Access Journals (Sweden)

    V.G. Menezes

    2002-08-01

    Full Text Available O presente trabalho teve por objetivo avaliar características morfofisiológicas de alguns biótipos de arroz-vermelho ocorrentes em lavouras de arroz no Estado do Rio Grande do Sul. Para isso, conduziu-se um experimento na Estação Experimental do Arroz do Instituto Rio-Grandense do Arroz, durante a estação de crescimento 1996/97. Os tratamentos constituíram-se dos seguintes biótipos de arroz-vermelho, segundo características de grãos: grãos longo-finos, de casca clara, com ou sem arista; grãos longo-finos, de casca preta; grãos médios, de casca clara, provenientes de dois locais (Santo Antônio da Patrulha e Cachoeira do Sul; e grãos curtos, de casca clara ou de casca preta. Como padrões comparativos foram utilizados os cultivares de arroz BR-IRGA 410 e IRGA 416. As variáveis avaliadas foram: estatura de planta, afilhamento, área foliar da folha bandeira, área foliar por planta, comprimento da panícula, números de espiguetas e de grãos por panícula, esterilidade de espiguetas, relação comprimento/largura de grão, peso médio de grãos, produção de grãos por planta e germinação de sementes. Os biótipos de arroz-vermelho avaliados diferiram dos cultivares de arroz para as características morfofisiológicas investigadas. De modo geral, para essas características, não se verificaram diferenças acentuadas entre biótipos possuidores de grãos curtos, entre biótipos com grãos médios e entre aqueles com grãos longo-finos, de casca clara. Características assemelhadas de dormência apresentadas pelos biótipos de arroz-vermelho com grãos longo-finos e de casca clara, com os cultivares de arroz, permitem inferir que aqueles sofreram cruzamentos com genótipos de arroz cultivado.This study was conducted to evaluate morphological and physiological characteristics of red rice biotypes in rice fields in the state of Rio Grande do Sul. An experiment was carried out at the Rice Experimental Station of Instituto Rio

  3. The effects of potassium levels in tobacco plants on the development, survival and host selectivity of Q-biotype Bemisia tabaci (Gennadius)%烟草钾营养对Q型烟粉虱发育、存活和寄主选择性的影响

    Institute of Scientific and Technical Information of China (English)

    金鹏; 林华峰; 李毅; 李茂业; 陈德鑫

    2014-01-01

    Objectives In order to provide a theoretical foundation for the control of Q-biotype Bemisia tabaci by regulating the nutrition of its host plant, the effects of potassium levels in tobacco plants on host selection, development and survival rate of Q-biotype B. tabaci were examined. [Methods] The host selection, development and survival rate of Q-biotype B. tabaci were investigated on water-cultured tobacco plants provided with five different concentrations of potassium:K1 (0 mmol/L), K2 (3 mmol/L), K3 (6 mmol/L), K4 (9 mmol/L) and K5 (12 mmol/L). [Results] Host preference, developmental duration and survival rate of Q-biotype B. tabaci on tobacco plants treated with different concentrations of potassium were significantly different. Relative feeding and oviposition preferences were K2>K1>K3>K4>K5, while the length of developmental duration from egg to adult on different plants was K5 (22.54 d)>K4 (21.96 d)>K1 (20.92 d)>K2 (20.32 d)>K3 (20.23 d). Survival rates from egg to adult on different plants were K3 (88.72%)>K2 (85.05%)>K1 (82.03%)>K4 (77.02%)> K5 (69.92%). [Conclusion] Q-biotype B. tabaci populations can be managed by regulating the potassium content of tobacco plants.%明确烟草钾营养对Q型烟粉虱Q-biotype Bemisia tabaci(Gennadius)的寄主选择性、发育和存活的影响,旨在为通过调节寄主植物营养控制Q型烟粉虱种群数量提供理论依据。水培法培养经K1(0 mmol/L)、K2(3 mmol/L)、K3(6 mmol/L)、K4(9 mmol/L)及K5(12 mmol/L)5个不同钾浓度处理的烟草,研究Q型烟粉虱在不同处理烟草上的寄主选择性、发育历期和存活率。Q型烟粉虱在不同钾浓度处理烟草上的寄主选择性、发育历期和存活率均有显著差异,取食和产卵偏好性顺序为K2>K1>K3>K4>K5,卵到成虫羽化发育历期顺序为K5(22.54 d)>K4(21.96 d)>K1(20.92 d)>K2(20.32 d)>K3(20.23 d),卵到成虫羽化存活率顺序为K3(88.72%)>K2(85.05%

  4. Interaction between resistant tomato genotypes and plant extracts on Bemisia tabaci (Genn. biotype B Interação de genótipos resistentes de tomateiro e extratos vegetais sobre Bemisia tabaci (Genn. biótipo B

    Directory of Open Access Journals (Sweden)

    Edson Luiz Lopes Baldin

    2007-10-01

    Full Text Available The tomato (Lycopersicon spp. productivity is severely reduced by attack of several insects and microorganisms. It is economically one of the most important crops that has been extensively cultivated in the Americas. Therefore, assays were performed in the greenhouse and the laboratory to evaluate the possible interaction between resistant tomato genotypes and plant extracts on the control of the pest Bemisia tabaci Gennadius (Hemiptera: Aleyrodidae biotype B. This evaluation was performed for genotypes IAC-Santa Clara, PI-134417, LA-716, PI-134418, and PI-127826, and aqueous extracts from seeds of Azadirachta indica A. de Jussieu (Rutales: Meliaceae, branches and leaves of Trichilia pallida Swartz (Rutales: Meliaceae. In the greenhouse, spraying with extracts from seeds of A. indica, and leaves and branches of T. pallida reduced whitefly attraction with IAC-Santa Clara; on PI-134417, LA-716, PI-134418, and PI-127826 the extracts did not affect the attractiveness to the B. tabaci biotype B. Extracts from A. indica seeds and T. pallida leaves and branches reduced oviposition on IAC-Santa Clara; extracts from T. pallida branches reduced oviposition on PI-134417, PI-134418, and PI-127826, while the extract from A. indica seeds reduced oviposition in PI-127826. The extracts did not affect oviposition on LA-716. In the laboratory, the extracts increased the mortality of nymphs on the genotypes. The "genotype × extract" interaction was significant, indicating an addictive effect between resistant genotypes and plant extracts on whitefly control.O tomate (Lycopersicon spp. é uma das hortaliças mais importantes do mundo em termos econômicos e tem sido extensivamente cultivado nas Américas há séculos. Entretanto, a produtividade poderia ser mais alta se ela não fosse suscetível a ataques de insetos e microorganismos. Foram realizados ensaios em casa-de-vegetação e laboratório visando avaliar a possível interação de genótipos de tomateiro

  5. Efficiency of neem oil nanoformulations to Bemisia tabaci (GENN. Biotype B (Hemiptera: AleyrodidaeEficiência de nanoformulações a base de óleo de nim sobre Bemisia tabaci (GENN. Biótipo B (Hemiptera: Aleyrodidae

    Directory of Open Access Journals (Sweden)

    Sheila Salles Carvalho

    2012-04-01

    Full Text Available The nanotechnology, through encapsulation of active ingredients, has showed an important way to avoid problems with quickly degradation of the pesticide molecules. Thus, neem (Azadirachta indica oil nanoformulations containing ?-ciclodextrin and poli-?-caprolactone (PCL were tested as to their control efficiency against eggs and nymphs of Bemisia tabaci (Genn. biotype B reared in soybean. The Lethal Concentration (LC50 was estimated using a commercial neem oil (Organic Neem® on first-instar nymphs to establish the adequate volume of the nanoformulations per treatment. After that, they were sprayed on eggs and first-instar nymphs in laboratory and greenhouse and on third-instar nymphs in greenhouse. The commercial neem oil and distilled water were used as controls. Egg viability was not affected by any treatment. Among six nanoformulations, only one was efficient against the first-instar nymphs in laboratory conditions. However, its effective period was not increased as expected. In greenhouse, first-instar nymphs were more affected by two nanoformulations which were significantly different of the commercial neem oil - the most effective one. No mortality differences among the formulations in the third-instar test were observed. The nanoformulations were less efficient to control the B. tabaci biotype B nymphs than the commercial neem oil. A nanotecnologia, através do encapsulamento de ingredientes ativos, tem-se revelado uma importante estratégia para evitar problemas com a rápida degradação de moléculas inseticidas. Assim, nanoformulações à base de óleo de nim (Azadirachta indica utilizando os polímeros ?-ciclodextrina e poli-?-caprolactona (PCL foram testadas quanto a sua eficiência de controle de ovos e ninfas de Bemisia tabaci (Genn. biótipo B mantidas em soja. Foi estimada a CL50 utilizando uma formulação comecial de óleo de nim (Organic Neem® sobre ninfas em 1º ínstar da qual se estipulou o volume das nanoformula

  6. Oviposição e dispersão de ninfas de Bemisia tabaci biótipo B em genótipos de tomateiro Oviposition and nymphal dispersion of Bemisia tabaci biotype B on tomato genotypes

    Directory of Open Access Journals (Sweden)

    Marilene Fancelli

    2008-12-01

    Full Text Available Diversos métodos têm sido empregados para avaliar a resistência de plantas a moscas-brancas. Todavia, poucos trabalhos têm sido realizados visando determinar a dispersão de ninfas desses insetos sobre as plantas. O objetivo do presente trabalho foi avaliar a oviposição de B. tabaci biótipo B e a dispersão de suas ninfas em folíolos com e sem exsudatos de genótipos de tomateiro. Foram utilizados sete genótipos de tomateiro: LA716, LA1739, PI134417, LA462, LA1584, 'Santa Clara' e P25 (controle suscetível. A oviposição de B. tabaci biótipo B foi avaliada em gaiolas plásticas (2,8 cm² fixadas na face abaxial dos folíolos, nas quais foram inseridos dez casais do inseto. Para avaliação da dispersão das ninfas, considerou-se o deslocamento dos insetos além do limite da área ocupada pelas gaiolas. As variáveis observadas foram: mortalidade de adultos 24 horas após a liberação, número de ovos, viabilidade da fase de ovo, período de incubação, número de ninfas e dispersão. Em folíolos com exsudato, LA716, LA1739 e PI134417 provocaram as maiores mortalidades. Adultos mortos nos folíolos desses genótipos ficaram aderidos aos tricomas glandulares, o que provocou redução na oviposição do inseto. Para dispersão, nos folíolos com exsudato, os máximos valores ocorreram nos genótipos LA716, LA462 e P25. Na condição sem exsudato, LA716 promoveu a menor dispersão das ninfas. A presença do exsudato influencia negativamente a sobrevivência e oviposição do inseto. A dispersão das ninfas também é afetada pelo exsudato, embora outros fatores possam ser importantes para o deslocamento do inseto.Several methods have been employed for evaluating plant resistance to whiteflies. Although, a few researches have been conducted aiming to determine the whitefly nymphal dispersion on crops. The objective of this work was to evaluate the oviposition of B. tabaci biotype B and nymphal dispersion in leaflets with and without

  7. Effects of calcium fertilizer on the development, survival, and feeding of B-biotype Bemisia tabaci on Euphorbia pulcherrima%钙肥对B型烟粉虱发育、存活及取食为害的影响

    Institute of Scientific and Technical Information of China (English)

    黄俊; 张娟; 郁永明; 刘建新; 李明江; 朱开元

    2012-01-01

    This paper studied the development, survival, and feeding of B-biotype Bemisia tabaci on Euphorbia pulcherrima under the conditions of 26±1 ℃ and 60% -80% relative humidity after applying calcium fertilizer, taking applying fresh water as the control. There existed significant differences in the developmental duration of B. tabaci between treatment applying calcium fertilizer and the control. After applying calcium fertilizer, the egg stage of B. tabaci shortened significantly, and the development from egg to adult took 20. 18 days (for the control, it took 18.72 days). However , there were no significant differences in the survival rates of B. tabaci at different development stages between the two treatments. The feeding of B. tabaci on E. pulcherrima induced the plant leaf chlorophyll fluorescence parameters changed, i. e. , the photochemical efficiency (Fv/Fm ) , photochemical quenching coefficient (qp) , light use efficiency (α) , maximum photosynthesis rate (rETRmax ) , and tolerance to light (Ik) decreased significantly, while the non-photochemical quenching coefficient (NPQ) had a significant increase. After applying calcium fertilizer, the plant leaf photoinhibition parameter (β) , rETRmax,and Ik had less difference with the control. The nail polish blot observation on the lower epidermis structure of plant leaf showed that calcium fertilizer could effectively compensate the decrease in the photosynthesis of E. pulcherrima damaged by B-biotype B. tabaci.%以清水为对照,研究了施用钙肥后一品红植株对B型烟粉虱发育、存活和取食为害的影响.结果表明:在温度(26±1)℃、相对湿度60%~80%条件下,钙肥处理的一品红植株上的B型烟粉虱在发育历期上与对照存在显著差异,卵期明显缩短,各龄若虫期延长,从卵到成虫的发育时间为20.18 d,而对照为18.72 d;但钙肥处理对B型烟粉虱各虫态的存活率无显著影响.B型烟粉虱的取食为害诱导了一品红叶片叶

  8. Tomato yellow vein streak virus: relationship with Bemisia tabaci biotype B and host range Tomato yellow vein streak virus: interação com a Bemisia tabaci biótipo B e gama de hospedeiros

    Directory of Open Access Journals (Sweden)

    Ana Carolina Firmino

    2009-12-01

    Full Text Available The Tomato yellow vein streak virus (ToYVSV is a putative species of begomovirus, which was prevalent on tomato crops in São Paulo State, Brazil, until 2005. The objectives of this study were to evaluate the interaction between ToYVSV and its vector Bemisia tabaci biotype B and to identify alternative hosts for the virus. The minimum acquisition and inoculation access periods of ToYVSV by B. tabaci were 30 min and 10 min, respectively. Seventy five percent of tomato-test plants were infected when the acquisition and inoculation access periods were 24 h. The latent period of the virus in the insect was 16 h. The ToYVSV was retained by B. tabaci until 20 days after acquisition. First generation of adult whiteflies obtained from viruliferous females were virus free as shown by PCR analysis and did not transmit the virus to tomato plants. Out of 34 species of test-plants inoculated with ToYVSV only Capsicum annuum, Chenopodium amaranticolor, C. quinoa, Datura stramonium, Gomphrena globosa, Nicotiana clevelandii and N. tabacum cv. TNN were susceptible to infection. B. tabaci biotype B was able to acquire the virus from all these susceptible species, transmitting it to tomato plants.O Tomato yellow vein streak virus (ToYVSV é uma espécie putativa de begomovirus que infecta o tomateiro (Solanum lycopersicon em diversas regiões do Brasil onde se cultiva essa solanácea, sendo a espécie prevalente no estado de São Paulo até 2005. Estudou-se a interação do ToYVSV com a Bemisia tabaci biótipo B e identificaram-se hospedeiras alternativas deste vírus. Os períodos de acesso mínimo de aquisição (PAA e de inoculação (PAI foram de 30 min e 10 min, respectivamente. A porcentagem de plantas infectadas chegou até cerca de 75% após um PAA e PAI de 24 h. O período de latência do vírus no vetor foi de 16 horas. O ToYVSV foi retido pela B. tabaci até 20 dias após a aquisição do vírus. Não foi detectada transmissão do vírus para prog

  9. Extremely Isolated Elliptical Galaxies

    Science.gov (United States)

    Fuse, Christopher R.; Marcum, P.; Fanelli, M.; Aars, C.

    2006-06-01

    Isolated galaxies provide a means of assessing the evolution of galactic systems. Extremely isolated galaxies define a zero-interaction baseline for comparative studies of galaxy evolution. We present results of a search for isolated elliptical galaxies (IEGs). We utilize the optical imaging data produced by the Sloan Digital Sky Survey (SDSS) to identify candidate galaxies from Release 1-4 of the SDSS. Candidate IEGs meet strict isolation criteria: Any IEG must be separated by at least 2.5 Mpc from any neighboring non-dwarf galaxy having a MV fainter than -16.5 mag. The candidate isolated systems have no non-dwarf neighbors within a distance such that we can insure that the IEGs have never interacted with another existing galaxy since formation.In order to increase the signal-to-noise ratio, we have used the SDSS images in the u,g,r filters to create combined sets of images for each IEG. The stacked images permit a more robust determination of the morphology of the candidate galaxies. Verification that these are spheroidal systems is achieved through a bulge/disk decomposition technique using standard surface photometry. Our preliminary sample of 51 isolated systems defines a complete volume-limited population of extremely isolated early-type galaxies within a distance of 72Mpc

  10. 不同温度下吡虫啉对B型烟粉虱毒杀活性的研究%Influence of temperature on the toxicity of imidacloprid on the different stages of Bemisia tabaci B -biotype (Hemiptera: Aleyrodidae)

    Institute of Scientific and Technical Information of China (English)

    黄俊; 韦茂兔; 张娟; 沈福泉; 李明江; 陈常理

    2011-01-01

    The effects of imidacloprid on the different stages of Bemisia tabaci B - biotype at the temperatures of22℃, 25℃, 28℃, 31℃ and 34℃ were detected using the dipping egg, impregnation and dipping leaf methods. The results showed that the control effects of imidacloprid on the different stages of B. Tabaci gradually increased with the increasing of temperature, and the 60 mg/L imidacloprid treatment was the most evident. Besides, compared with the treatment of 22% and 34℃, the control effects of 60 mg/L imidacloprid on B. Tabaci eggs, low - instar nymphs, high - instar nymphs and adults rose by 20. 89% , 33. 52% , 33.37% and 17.86% respectively. Consequently, the increasing of temperature has positive effect on the control of B. Tabaci by imidacloprid.%分别采用浸卵法、浸渍法和浸叶法测定了22、25、28、31和34℃下吡虫啉对B型烟粉虱Bemisia tabaci B - biotype不同虫态的控制效果.结果表明,随着温度的升高,吡虫啉对B型烟粉虱不同虫态的控制效果也逐渐上升,当温度上升至34℃时,60 mg/L浓度药液处理下卵、低龄若虫、高龄若虫及成虫死亡率分别较22℃时升高了20.89%、33.52%、33.37%及17.86%.因此,温度提高对吡虫啉防治B型烟粉虱起到了正面效应.

  11. Aqueous extracts and oil of neem combined with neonicotinoid insecticides against Bemisia tabaci biotype B in melon Extratos aquosos e óleo de nim associados com inseticidas neonicotinóides sobre Bemisia tabaci biótipo B em meloeiro

    OpenAIRE

    Maria Santana de Araújo Trindade; Adalberto Hipólito de Sousa; Patrício Borges Maracajá; Rui Sales Júnior; Wilson Galdino de Andrade

    2007-01-01

    This research was aimed at evaluating nymph population density of whitefly (Bemisia tabaci biotype B) in melon plants after treatment with neem-dry-leaf aqueous extracts and neem-oil ( A. Juss.) applied alternately with neonicotinoid insecticides under field conditions. The experimental design was a randomized block, with 6 treatments and 4 replications. The treatments were control (only water); neem-dry-leaf extract at 5% (neem-dry-leaf powder 50g L-1 of water); neem oil (5.0mL L-1 water); c...

  12. Análise comparativa do crescimento de biótipos de picão-preto (Bidens pilosa resistente e suscetível aos herbicidas inibidores da ALS Growth analysis of Bidens pilosa biotypes resistant and susceptible to ALS inhibitor herbicides

    Directory of Open Access Journals (Sweden)

    P.J. Christoffoleti

    2001-04-01

    , TCA, TCR e TAL maiores que o suscetível. Dessa forma, concluiu-se que o biótipo de Bidens pilosa resistente aos herbicidas inibidores da ALS apresenta a mesma eficiência de produção de biomassa no final do ciclo. É provável que, quando em competição entre si e com as culturas, possua a mesma competitividade, sendo a dominância numérica de um biótipo sobre o outro decorrente apenas da pressão de seleção causada pelo herbicida.The resistance of weed biotypes to acetolactate synthase (ALS inhibitor herbicides is due to this enzyme's lack of sensitivity to ALS inhibitor herbicides, which inhibit its catalytic activity. ALS insensitivity results from a structural change in the aminoacid sequence, exactly in the site of action of these herbicides. Eventually this modification in the enzyme may result in a reduced plant growth rate. Such reduction was also observed in biotypes resistant to Photosystem II inhibitor herbicides. The possibility of a lower growth rate of the resistant plant may directly affect biotype competitiveness, its population dynamics and, as a consequence, resistance management strategies. The objective of this research was to compare the growth rates of both resistant and susceptible Bidens pilosa biotypes to ALS inhibitor herbicides. The experiment was conducted in a greenhouse, using one plant per pot of 5 L capacity. Four plants per biotype were harvested weekly, starting 14 days after planting, and the leaf area and dry biomass were measured. The Richards function fitted to the data enabled the derivation of absolute growth rate, relative growth rate and net assimilation rate. The susceptible biotype had a higher biomass accumulation during the early stages, with both biotypes having the same size, afterwards. The higher net assimilation rate of the resistant biotype during the early stages of growth was balanced by its lower size during the first four weeks of growth. It was concluded that both biotypes have the same size, being very

  13. Alternativ isolering i bygninger

    DEFF Research Database (Denmark)

    Hansen, Ernst Jan de Place

    2001-01-01

    Resume af rapport om målinger på alternative isoleringsmaterialer i bygninger, udgivet af Statens Byggeforskningsinstitut (SBI meddelelse 128) under Energistyrelsens udviklingsprogram "Miljø- og arbejdsmiljøvenlig isolering"...

  14. Base isolation: Fresh insight

    Energy Technology Data Exchange (ETDEWEB)

    Shustov, V.

    1993-07-15

    The objective of the research is a further development of the engineering concept of seismic isolation. Neglecting the transient stage of seismic loading results in a widespread misjudgement: The force of resistance associated with velocity is mostly conceived as a source of damping vibrations, though it is an active force at the same time, during an earthquake type excitation. For very pliant systems such as base isolated structures with relatively low bearing stiffness and with artificially added heavy damping mechanism, the so called `damping`` force may occur even the main pushing force at an earthquake. Thus, one of the two basic pillars of the common seismic isolation philosophy, namely, the doctrine of usefulness and necessity of a strong damping mechanism, is turning out to be a self-deception, sometimes even jeopardizing the safety of structures and discrediting the very idea of seismic isolation. There is a way out: breaking with damping dependancy.

  15. Isolation of Human Eosinophils

    OpenAIRE

    Akuthota, Praveen; Shamri, Revital; Weller, Peter F.

    2012-01-01

    Highly purified eosinophils can be isolated from peripheral blood by negative selection using an antibody-based magnetic negative selection protocol. The basic protocol describes a sequential fractionation of peripheral blood in which CD16+ granulocytes are enriched first from whole blood, followed by isolation of eosinophils. This technique is easy to use, fast, and highly reproducible. Support protocols describe a staining methods that can be used to evaluate the purity of eosinophils and d...

  16. Isolated sleep paralysis

    OpenAIRE

    Sawant, Neena S.; Shubhangi R Parkar; Tambe, Ravindra

    2005-01-01

    Sleep paralysis (SP) is a cardinal symptom of narcolepsy. However, little is available in the literature about isolated sleep paralysis. This report discusses the case of a patient with isolated sleep paralysis who progressed from mild to severe SP over 8 years. He also restarted drinking alcohol to be able to fall asleep and allay his anxiety symptoms. The patient was taught relaxation techniques and he showed complete remission of the symptoms of SP on follow up after 8 months.

  17. Isolation of cellulose microfibrils - An enzymatic approach

    Directory of Open Access Journals (Sweden)

    Sain, M.

    2006-11-01

    Full Text Available Isolation methods and applications of cellulose microfibrils are expanding rapidly due to environmental benefits and specific strength properties, especially in bio-composite science. In this research, we have success-fully developed and explored a novel bio-pretreatment for wood fibre that can substantially improve the microfibril yield, in comparison to current techniques used to isolate cellulose microfibrils. Microfibrils currently are isolated in the laboratory through a combination of high shear refining and cryocrushing. A high energy requirement of these procedures is hampering momentum in the direction of microfibril isolation on a sufficiently large scale to suit potential applications. Any attempt to loosen up the microfibrils by either complete or partial destruction of the hydrogen bonds before the mechanical process would be a step forward in the quest for economical isolation of cellulose microfibrils. Bleached kraft pulp was treated with OS1, a fungus isolated from Dutch Elm trees infected with Dutch elm disease, under different treatment conditions. The percentage yield of cellulose microfibrils, based on their diameter, showed a significant shift towards a lower diameter range after the high shear refining, compared to the yield of cellulose microfibrils from untreated fibres. The overall yield of cellulose microfibrils from the treated fibres did not show any sizeable decrease.

  18. The roles of CC2D1A and HTR1A gene expressions in autism spectrum disorders.

    Science.gov (United States)

    Sener, Elif Funda; Cıkılı Uytun, Merve; Korkmaz Bayramov, Keziban; Zararsiz, Gokmen; Oztop, Didem Behice; Canatan, Halit; Ozkul, Yusuf

    2016-06-01

    Classical autism belongs to a group of heterogeneous disorders known as autism spectrum disorders (ASD). Autism is defined as a neurodevelopmental disorder, characterized by repetitive stereotypic behaviors or restricted interests, social withdrawal, and communication deficits. Numerous susceptibility genes and chromosomal abnormalities have been reported in association with autism but the etiology of this disorder is unknown in many cases. CC2D1A gene has been linked to mental retardation (MR) in a family with a large deletion before. Intellectual disability (ID) is a common feature of autistic cases. Therefore we aimed to investigate the expressions of CC2D1A and HTR1A genes with the diagnosis of autism in Turkey. Forty-four autistic patients (35 boys, 9 girls) and 27 controls were enrolled and obtained whole blood samples to isolate RNA samples from each participant. CC2D1A and HTR1A gene expressions were assessed by quantitative Real-Time PCR (qRT-PCR) in Genome and Stem Cell Center, Erciyes University. Both expressions of CC2D1A and HTR1A genes studied on ASD cases and controls were significantly different (p < 0.001). The expression of HTR1A was undetectable in the ASD samples. Comparison of ID and CC2D1A gene expression was also found statistically significant (p = 0.028). CC2D1A gene expression may be used as a candidate gene for ASD cases with ID. Further studies are needed to investigate the potential roles of these CC2D1A and HTR1A genes in their related pathways in ASD.

  19. IBD-associated TL1A gene (TNFSF15 haplotypes determine increased expression of TL1A protein.

    Directory of Open Access Journals (Sweden)

    Kathrin S Michelsen

    Full Text Available BACKGROUND: The recently identified member of the TNF superfamily TL1A (TNFSF15 increases IFN-gamma production by T cells in peripheral and mucosal CCR9+ T cells. TL1A and its receptor DR3 are up-regulated during chronic intestinal inflammation in ulcerative colitis and Crohn's disease (CD. TL1A gene haplotypes increase CD susceptibility in Japanese, European, and US cohorts. METHODOLOGY AND PRINCIPAL FINDINGS: Here we report that the presence of TL1A gene haplotype B increases risk in Jewish CD patients with antibody titers for the E. coli outer membrane porin C (OmpC+ (Haplotype B frequency in Jewish CD patients: 24.9% for OmpC negative and 41.9% for OmpC positive patients, respectively, P< or =0.001. CD14+ monocytes isolated from Jewish OmpC+ patients homozygous for TL1A gene haplotype B express higher levels of TL1A in response to FcgammaR stimulation, a known inducing pathway of TL1A, as measured by ELISA. Furthermore, the membrane expression of TL1A is increased on peripheral monocytes from Jewish but not non-Jewish CD patients with the risk haplotype. CONCLUSIONS AND SIGNIFICANCE: These findings suggest that TL1A gene variation exacerbates induction of TL1A in response to FcgammaR stimulation in Jewish CD patients and this may lead to chronic intestinal inflammation via overwhelming T cell responses. Thus, TL1A may provide an important target for therapeutic intervention in this subgroup of IBD patients.

  20. IDENTIFICATION AND ANTIBIOTIC RESISTANCE PROFILE OFENTEROBACTERIACEAE SPECIES AND LACTOBACILLUS SPP. ISOLATED FROM HONEY BEES (APIS MELLIFERA DIGESTIVE TRACT

    Directory of Open Access Journals (Sweden)

    Lukáš Hleba

    2014-02-01

    Full Text Available Honey bees play important role in agricultural environment as main pollinators. Its important for many agricultural and wild plants. Also honey bee are producers of honey, which is consumed directly and it should be not a heat treatment. Many bacteria can be survive in honey for long time. Some of these bacteria are human and animal facultative pathogens, including Enterobactericaeae genera. If these bacteria contain antibiotic resistant genes than it can to leads to troubles in healing of some of bacterial infections. Lactobacillus spp. can be a reservoir of resistant genes for pathogenic bacterial strains. In this study we isolated Enterobacteriaceae strains from digestive tracts of honey bees. These strains was tested to the eight selected antibiotics by disc diffusion method and strains were indentified by MALDI TOF MS Biotyper. From this study we determined resistance to piperacillin in the highest level. Equally, we determined that Citrobacter gillenii was resistant to three antibiotics (piperacillin, chloramphenicol and levofloxacin from eight. Resistance to other antibiotics were determined in low levels and other indentified bacteria were resistant to one antibiotic, if any. Also we detected resistance in Lactobacillus spp. and determined MICs distribution for some selected antibiotics. For absence of similar studies we could not to discuss our results and we think that further experiments and studies are needed.

  1. Effects of host plants on the growth and development, trehalose content and two enzyme activities of Q-biotype Bemisia tabaci%寄主植物对Q型烟粉虱生长发育、海藻糖含量及2种酶活性的影响

    Institute of Scientific and Technical Information of China (English)

    谭永安; 肖留斌; 孙洋; 柏立新

    2012-01-01

    This experiment was conducted to determine the sizes of nymph, developmental durations, survival rates, content of trehalose and two enzyme activities for Q-biotype Bemisia tabaci fed on tomato, cucumber, cotton, pi-emarker. The sizes of Q-biotype B. tabaci nymphs on tomato and cucumbe were bigger than those on cotton and piemarker. The duration of Q-biotype B. tabaci nymphs on tomato was the shortest (17. 01 d) , followed by cucumber (18. 25 d ) , piemarker (20.31 d), cotton (20.57 d). The survival rates of Q-biotype B. tabaci on tomato, cucumber, cotton, and piemarker were 63. 71% , 61. 33% , 53. 77% and 51. 76% respectively. Tomato and cucumber were in favor of the Q-biotype populations breeding compared to cotton and piemarker, and adult longevity and single female spawning quantity on tomato , cucumber, cotton, and piemarker were respectively 24. 55 d and 268. 20 grains, 24.65 d and 202. 65 grains, 23.30 d and 173. 45 grains, 17. 10 d and 146. 70 grains. The trehalose content of the Q-biotype Bemisia tabaci fed on tomato was the highest (9. 38 (μg per nymph) , and that fed on cotton was the lowest (7. 15 μg per nymph) , but there was no positive correlation between trehalase activity and trehalose content. The alkaline phosphatase activity of the Q-biotype Bemisia tabaci fed on tomato was the highest [ 58. 57 OD/( min · ml) ]. In a word, tomato was the best host plant for Q-biotype B. tabaci.%以番茄、黄瓜、棉花及苘麻为供试寄主,测定了取食这4种寄主后的Q型烟粉虱的体型、发育历期、存活率等生物学参数与海藻糖含量及2种酶活性.结果表明:Q型烟粉虱若虫在番茄和黄瓜上的体型大于棉花和苘麻上的;在番茄上的若虫历期最短(17.01 d),其余依次为黄瓜(18.25 d)、苘麻(20.31 d)、棉花(20.57 d);Q型烟粉虱在番茄、黄瓜、棉花及苘麻上存活率分别为63.71%、61.33%、53.77%和51.76%;与棉花和苘麻相比,番茄和黄瓜明显有利于Q型烟粉虱

  2. Translation elongation factor-1A1 (eEF1A1 localizes to the spine by domain III

    Directory of Open Access Journals (Sweden)

    Sun-Jung Cho

    2012-04-01

    Full Text Available In vertebrates, there are two variants of eukaryotic peptideelongation factor 1A (eEF1A; formerly eEF-1α, eEF1A1 andeEF1A2, which have three well-conserved domains (DI, DII,and DIII. In neurons, eEF1A1 is the embryonic type, which isexpressed during embryonic development as well as the firsttwo postnatal weeks. In the present study, EGFP-tagged eEF1A1truncates were expressed in cortical neurons isolated from ratembryo (E18-19. Live cell images of transfected neurons showedthat DIII-containing EGFP-fusion proteins (EGFP-DIII, -DII-III,-DI-III formed clusters that were confined within somatodendriticdomains, while DIII-missing ones (EGFP-DI, -DII, -DI-II andcontrol EGFP were homogeneously dispersed throughout theneuron including axons. In dendrites, EGFP-DIII was targeted tothe heads of spine- and filopodia-like protrusions, where it wascolocalized with SynGAPα, a postsynaptic marker. Our dataindicate that DIII of eEF1A1 mediates formation of clusters andlocalization to spines. [BMB reports 2012; 45(4: 227-232

  3. Alteração das características biológicas dos biótipos de azevém (Lolium multiflorum ocasionada pela resistência ao herbicida glyphosate Change in the biological characteristics of ryegrass (Lolium multiflorum biotypes caused by resistance to the herbicide glyphosate

    Directory of Open Access Journals (Sweden)

    L. Vargas

    2005-03-01

    Full Text Available A resistência de biótipos de azevém ao herbicida glyphosate está alterando o manejo da vegetação de cobertura do solo em pomares de maçã. O objetivo deste trabalho foi determinar a dose de glyphosate necessária para reduzir 50% do acúmulo de matéria seca (GR50, a resposta do biótipo resistente e sensível a herbicidas graminicidas e o acúmulo de matéria seca destes biótipos durante o ciclo. Para isso, foram conduzidos três experimentos. No primeiro, os tratamentos constaram de doses crescentes de glyphosate aplicadas sobre plantas dos biótipos resistente e sensível para determinar o GR50. No segundo experimento, os tratamentos constaram de doses dos herbicidas glyphosate, haloxyfop-r, diclofop, fluazifop-p, fenoxaprop-p e paraquat. No terceiro experimento, sementes dos biótipos resistente e sensível foram semeadas em recipientes com capacidade para 10 L e as plantas originadas delas foram colhidas quinzenalmente, para determinação da matéria seca da parte aérea, radicular e total. Como resultados, foi obtido GR50 de 287,5 e de 4.833,5 g e.a. ha-1 de glyphosate para os biótipos sensível e resistente, respectivamente, e verificou-se que existem diferenças significativas na resposta dos biótipos aos herbicidas graminicidas, dependendo da dose utilizada. Além disso, o biótipo sensível evidenciou maior capacidade de acúmulo de matéria seca e produção de sementes. Constatouse, assim, fator de resistência (FR de 16,8 e que o mecanismo de resistência provoca alterações nas características biológicas do biótipo resistente e afeta a sensibilidade deste aos herbicidas graminicidas.The identification of ryegrass biotypes resistant to glyphosate is causing changes in weed management in apple orchards. Three experiments were carried out to determine the GR50 of the biotypes, to grass herbicides and dry matter accumulation. The first experiment tested different rates of glyphosate. Their effects on GR50 dry matter

  4. Relationship between Resistance of Rice Varieties to Rice Gall Midge (Orseolia oryzae) Biotype China Ⅳ and Total Phenol Contents%水稻品种对稻瘿蚊中国Ⅳ型的抗性及其与总酚含量关系

    Institute of Scientific and Technical Information of China (English)

    农春莲; 吴碧球; 黄所生; 黄凤宽

    2011-01-01

    To clarify resistance and the mechanism of rice varieties to rice gall midge (CM) biotype China IV, antibiosis of 11 rice varieties to CM biotype China IV were tested, and the correlation between total phenol content and the resistance of rice varieties to CM was studied. The results indicated that ARC5984, 570011, ARCS833, RP1976-18-64-2 and RNR3070 were highly resistant to GM biotype China IV, and there were no preference in opposition and incursion of CM biotype China IV to resistant and susceptible rice varieties. A majority of larvae died, and the survival ones developed very slowly, most of them stayed in first instar larvae in high resistance rice varieties. The total phenol contents in high resistance variety 570011 (2.63 mg/g) were the highest, and the total phenol contents in susceptible variety W1263 (1.23 mg/g) were the lowest. The total phenol contents in resistant varieties 570011, ARC5984, ARC5833, RP1976-18-6-4-2, RNR3070 and Duokangl were significantly higher than the susceptible varieties TNI, W1263. There were obvious positive correlations between the total phenol contents in rice varieties leaves and the resistance of rice varieties to CM biotype China IV.%为明确水稻品种对稻瘿蚊中国Ⅳ型的抗性及其机制,研究了11个水稻品种对稻瘿蚊中国Ⅳ型的抗生性,并探讨总酚含量与水稻品种抗稻瘿蚊中国Ⅳ型的关系.结果表明,ARC5984、570011、ARC5833、RP1976 -18-6 -4-2、RNR3070高抗稻瘿蚊中国Ⅳ型;稻瘿蚊中国Ⅳ型对抗感水稻品种无产卵和入侵偏嗜性;在高抗水稻品种稻株内大部分幼虫死亡,存活幼虫发育缓慢,多数停留在一龄虫态阶段.高抗品种570011的总酚含量最高,达2.63 mg/g,感虫品种W1263的总酚含量最低,仅有1.23 mg/g;抗虫品种570011、ARC5984、ARC5833、RP1976-18-6-4-2、RNR3070和Duokangl的总酚含量极显著高于感虫品种TN1和W1263.水稻品种对稻瘿蚊中国Ⅳ型的抗性与稻叶总酚含量呈显著正相关.

  5. Isolated Fallopian Tube Torsion

    Directory of Open Access Journals (Sweden)

    S. Kardakis

    2013-01-01

    Full Text Available Isolated torsion of the Fallopian tube is a rare gynecological cause of acute lower abdominal pain, and diagnosis is difficult. There are no pathognomonic symptoms; clinical, imaging, or laboratory findings. A preoperative ultrasound showing tubular adnexal masses of heterogeneous echogenicity with cystic component is often present. Diagnosis can rarely be made before operation, and laparoscopy is necessary to establish the diagnosis. Unfortunately, surgery often is performed too late for tube conservation. Isolated Fallopian tube torsion should be suspected in case of acute pelvic pain, and prompt intervention is necessary.

  6. Antimicrobial Efficacy of a Lactic Acid and Citric Acid Blend against Shiga Toxin-Producing Escherichia coli, Salmonella, and Nonpathogenic Escherichia coli Biotype I on Inoculated Prerigor Beef Carcass Surface Tissue.

    Science.gov (United States)

    Scott, Brittney R; Yang, Xiang; Geornaras, Ifigenia; Delmore, Robert J; Woerner, Dale R; Adler, Jeremy M; Belk, Keith E

    2015-12-01

    Studies were conducted to (i) determine whether inoculants of nonpathogenic Escherichia coli biotype I effectively served as surrogates for E. coli O157:H7, non-O157 Shiga toxin-producing E. coli, and Salmonella when prerigor beef carcass tissue was treated with a commercially available blend of lactic acid and citric acid (LCA) at a range of industry conditions of concentration, temperature, and pressure; (ii) determine the antimicrobial efficacy of LCA; and (iii) investigate the use of surrogates to validate a hot water and LCA sequential treatment as a carcass spray intervention in a commercial beef harvest plant. In an initial laboratory study, beef brisket tissue samples were left uninoculated or were inoculated (∼6 log CFU/cm(2)) on the adipose side with E. coli O157:H7 (5-strain mixture), non-O157 Shiga toxin-producing E. coli (12-strain mixture), Salmonella (6-strain mixture), or nonpathogenic E. coli (5-strain mixture). Samples were left untreated (control) or were treated with LCA, in a spray cabinet, at one of eight combinations of solution concentration (1.9 and 2.5%), solution temperature (43 and 60°C), and application pressure (15 and 30 lb/in(2)). In a second study, the E. coli surrogates were inoculated (∼6 log CFU/cm(2)) on beef carcasses in a commercial facility to validate the use of a hot water treatment (92.2 to 92.8°C, 13 to 15 lb/in(2)) followed by an LCA treatment (1.9%, 50 to 51.7°C, 13 to 15 lb/in(2), 10 s). In the in vitro study, surrogate and pathogen bacteria did not differ in their response to the tested LCA treatments. Treatment with LCA reduced (P < 0.05) inoculated populations by 0.9 to 1.5 log CFU/cm(2), irrespective of inoculum type. The hot water and LCA sequential treatments evaluated in the commercial facility reduced (P < 0.05) the inoculated nonpathogenic E. coli surrogates on carcasses by 3.7 log CFU/cm(2). This study therefore provides the meat industry with data for this sequential multiple hurdle system for the

  7. Assesing Bemisia tabaci (Genn. biotype B resistance in soybean genotypes: Antixenosis and antibiosis Evaluación de la resistencia de genotipos de soya a Bemisia tabaci (Genn. biotipo B: Antixenosis y antibiosis

    Directory of Open Access Journals (Sweden)

    José Paulo Gonçalves Franco da Silva

    2012-12-01

    Full Text Available Since it was first reported in Brazil in the 1990s, the B biotype of silverleaf whitefly (Bemisia tabaci Genn., Hemiptera: Aleyrodidae has been recognized as an important pest in soybeans (Glycine max L., reducing the productivity of this legume species in some areas of the country. As an alternative to chemical control, the use of resistant genotypes represents an important tool for integrated pest management (IPM. This study evaluated the performance of 10 soybean genotypes prior to whitefly infestation, by testing attractiveness and preference for oviposition in the greenhouse and antibiosis in the laboratory. In a multiple-choice test, 'IAC-17' was the least attractive to insects. In a no-choice test, 'IAC-17' was the least attractive for egg deposition, indicating the occurrence of non-preference for oviposition on this genotype. Trichome density was positively correlated with the oviposition site and may be associated with the resistance of 'IAC-17' to infestation. The genotypes 'IAC-PL1', 'IAC-19', 'Conquista', 'IAC-24' and 'IAC-17' extended the insect's life cycle, indicating the occurrence of a small degree of antibiosis and/or non-preference for feeding.Desde que se registró por primera vez en Brasil en la década de 1990, el biotipo B de la mosca-blanca (Bemisia tabaci Genn., Hemiptera: Aleyrodidae, se reconoce como una importante plaga de la soya (Glycine max L. y es lo que reduce la productividad de estas especies de leguminosas en algunas zonas del pais. Como una alternativa al control químico, el uso de genotipos resistentes representa una herramienta importante para la gestión integrada de plagas (MIP. Este trabajo evaluó el comportamiento de 10 genotipos de soya frente al ataque de la mosca-blanca, por medio de ensayos de atractividad y preferencia para ovipostura en invernaderos y antibiosis en laboratorio. En una prueba de elección multiple, 'IAC-17' fue el menos atractivo para los insectos. En una prueba sin elecci

  8. Motion of isolated bodies

    Energy Technology Data Exchange (ETDEWEB)

    Choquet-Bruhat, Yvonne [Academie des Sciences, 23 Quai de Conti, 75270 Paris Cedex 06 (France); Friedrich, Helmut [Max-Planck-Institut fuer Gravitationsphysik, Am Muehlenberg 1, 14476 Golm (Germany)

    2006-10-21

    It is shown that sufficiently smooth initial data for the Einstein-dust or the Einstein-Maxwell-dust equations with non-negative density of compact support develop into solutions representing isolated bodies in the sense that the matter field has spatially compact support and is embedded in an exterior vacuum solution.

  9. Motion of Isolated bodies

    CERN Document Server

    Choquet-Bruhat, Y; Choquet-Bruhat, Yvonne; Friedrich, Helmut

    2006-01-01

    It is shown that sufficiently smooth initial data for the Einstein-dust or the Einstein-Maxwell-dust equations with non-negative density of compact support develop into solutions representing isolated bodies in the sense that the matter field has spatially compact support and is embedded in an exterior vacuum solution.

  10. Chiral fiber optical isolator

    Science.gov (United States)

    Kopp, Victor I.; Zhang, Guoyin; Zhang, Sheng; Genack, Azriel Z.; Neugroschl, Dan

    2009-02-01

    We propose an in-fiber chiral optical isolator based on chiral fiber polarizer technology and calculate its performance by incorporating the magnetic field into the scattering matrix. The design will be implemented in a special preform, which is passed through a miniature heat zone as it is drawn and twisted. The birefringence of the fiber is controlled by adjusted the diameter of a dual-core optical fiber. By adjusting the twist, the fiber can convert linear to circular polarization and reject one component of circular polarization. In the novel central portion of the isolator, the fiber diameter is large. The effective birefringence of the circular central core with high Verdet constant embedded in an outer core of slightly smaller index of refraction is small. The central potion is a non-reciprocal polarization converter which passes forward traveling left circularly polarized (LCP) light as LCP, while converting backward propagating LCP to right circularly polarized (RCP) light. Both polarizations of light traveling backwards are scattered out of the isolator. Since it is an all-glass structure, we anticipate that the isolator will be able to handle several watts of power and will be environmentally robust.

  11. Isolated fructose malabsorption.

    OpenAIRE

    Wales, J. K.; Primhak, R A; Rattenbury, J; Taylor, C J

    1990-01-01

    A patient with isolated fructose malabsorption presented with diarrhoea and colic during the first year of life and subsequently responded to a fructose free diet. Fructose malabsorption has been implicated in some cases of irritable bowel syndrome in adults and may also be an infrequently recognised cause of gastrointestinal symptoms in children.

  12. Isolated jejunal varices.

    Directory of Open Access Journals (Sweden)

    Bhagwat S

    1995-04-01

    Full Text Available Isolated jejunal varices are an uncommon manifestation of portal hypertension. A one and a half year old boy presented with recurrent, massive gastrointestinal bleeding from jejunal varices. The bleeding site was identified at exploratory laparotomy. Jejunal resection and anastomosis resulted in complete resolution of the bleeding and there has been no recurrent bleeding over an eight month follow-up period.

  13. Proteoglycan isolation and analysis

    DEFF Research Database (Denmark)

    Woods, A; Couchman, J R

    2001-01-01

    Proteoglycans can be difficult molecules to isolate and analyze due to large mass, charge, and tendency to aggregate or form macromolecular complexes. This unit describes detailed methods for purification of matrix, cell surface, and cytoskeleton-linked proteoglycans. Methods for analysis...

  14. Studies in benzimidazo [2,1-a] isoquinoline chemistry

    OpenAIRE

    Donaghy, Michael

    2001-01-01

    Studies in Benzimidazo[2,1-a]isoquinoline Chemistry by Michael John Donaghy B. Sc. (Hons.) Ellipticine, a member of the pyrido[4,3-b]carbazole alkaloid family first isolated in 1959 from the leaves of the plant Ochrosia Elliptica has been shown to possess anti-cancer activity against various tumours. Ellipticine is thought to undergo biological oxidation to give the more active 9-hydroxyellipticine that is subsequently converted to a highly reactive quinone-imine intermediate. The quinone-imi...

  15. Method for isolating nucleic acids

    Science.gov (United States)

    Hurt, Jr., Richard Ashley; Elias, Dwayne A.

    2015-09-29

    The current disclosure provides methods and kits for isolating nucleic acid from an environmental sample. The current methods and compositions further provide methods for isolating nucleic acids by reducing adsorption of nucleic acids by charged ions and particles within an environmental sample. The methods of the current disclosure provide methods for isolating nucleic acids by releasing adsorbed nucleic acids from charged particles during the nucleic acid isolation process. The current disclosure facilitates the isolation of nucleic acids of sufficient quality and quantity to enable one of ordinary skill in the art to utilize or analyze the isolated nucleic acids for a wide variety of applications including, sequencing or species population analysis.

  16. Isolated lung perfusion.

    Science.gov (United States)

    Cypel, Marcelo; Keshavjee, Shaf

    2012-01-01

    Isolated lung perfusion (ILP) has been historically used as a method to study basic lung physiologic concepts using animal models. More recently, ILP has been applied in lung transplantation and thoracic oncology. In lung transplantation, ILP has been used to assess physiological integrity of donor lungs after the organ is removed from the donor. This procedure is called Ex vivo Lung Perfusion (EVLP), and it has also been proposed as a method for active treatment and repair of injured unsuitable donor organs ex vivo. In oncology, ILP is an attractive method to deliver high dose chemotherapy to treat pulmonary metastatic disease. Since the lung vasculature is isolated in vivo, this technique is called in vivo lung perfusion (IVLP). This review will focus on the rationale, technical aspects, experimental and clinical experience of EVLP and IVLP. A perspective on the future use of these techniques is described. PMID:22202033

  17. Ultrasonic thermometer isolation standoffs

    International Nuclear Information System (INIS)

    A method is provided for minimizing sticking of the transmission line to the protective sheath and preventing noise echoes from interfering with signal echoes in an improved high temperature ultrasonic thermometer which includes an ultrasonic transmission line surrounded by a protective sheath. Small isolation standoffs are mounted on the transmission line to minimize points of contact between the transmission line and the protective sheath, the isolation standoffs serving as discontinuities mounted on the transmission line at locations where a signal echo is desired or where an echo can be tolerated. Consequently any noise echo generated by the sticking of the standoff to the protective sheath only adds to the amplitude of the echo generated at the standoff and does not interfere with the other signal echoes. 6 claims, 3 figures

  18. High voltage isolation transformer

    Science.gov (United States)

    Clatterbuck, C. H.; Ruitberg, A. P. (Inventor)

    1985-01-01

    A high voltage isolation transformer is provided with primary and secondary coils separated by discrete electrostatic shields from the surfaces of insulating spools on which the coils are wound. The electrostatic shields are formed by coatings of a compound with a low electrical conductivity which completely encase the coils and adhere to the surfaces of the insulating spools adjacent to the coils. Coatings of the compound also line axial bores of the spools, thereby forming electrostatic shields separating the spools from legs of a ferromagnetic core extending through the bores. The transformer is able to isolate a high constant potential applied to one of its coils, without the occurrence of sparking or corona, by coupling the coatings, lining the axial bores to the ferromagnetic core and by coupling one terminal of each coil to the respective coating encasing the coil.

  19. Electron isolation at ATLAS

    International Nuclear Information System (INIS)

    The ATLAS experiment at the Large Hadron Collider (LHC) will face the challenge of efficiently selecting interesting candidate events in pp collisions at 14 TeV centre-of-mass energy, whilst rejecting the enormous number of background events. Many of these interesting candidate events have isolated leptons in the final state, like for example events with a gauge boson or SUSY. On top of the standard ATLAS electron identification an isolation criterion has been developed using a likelihood as multivariate approach with several discriminating variables. The likelihood is constructed by selecting electrons from Z decays for the signal and for the background electrons from b quark jets. Results for the example of the associated Higgs boson production with top quarks and subsequent decay into a pair of W bosons are presented. In addition first results of a likelihood to discriminate against jets are given and a possible extension for muons is discussed

  20. Brown Fat Cell Isolation

    OpenAIRE

    sprotocols

    2014-01-01

    Author: C.R. Kahn ### 1.) ISOLATION AND PRIMARY CULTURE OF BROWN FAT PREADIPOCYTES ### Rationale: To prepare primary brown preadipocytes for immortalization: useful for metabolic studies from knockout mice. This consists of the following five protocols. References: Fasshauer, M., J. Klein, K M. Kriauciunas, K. Ueki, M.Benito, and C.R. Kahn. 2001. Essential role of insulin substrate 1 in differentiation of brown adipocytes. *Mol Cell Biol* 21: 319-329. Fasshauer, M....

  1. Napoleon in isolation

    OpenAIRE

    Calegari, Danny

    1999-01-01

    Napoleon's theorem in elementary geometry describes how certain linear operations on plane polygons of arbitrary shape always produce regular polygons. More generally, certain triangulations of a polygon that tiles R^2 admit deformations which keep fixed the symmetry group of the tiling. This gives rise to isolation phenomena in cusped hyperbolic 3-manifolds, where hyperbolic Dehn surgeries on some collection of cusps leaves the geometric structure at some other collection of cusps unchanged.

  2. Isolated unilateral disk edema

    OpenAIRE

    Varner P

    2011-01-01

    Paul VarnerJohn J Pershing VAMC, Poplar Bluff, MO, USAAbstract: Isolated unilateral disk edema is a familiar clinical presentation with myriad associations. Related, non-consensus terminology is a barrier to understanding a common pathogenesis. Mechanisms for the development of disk edema are reviewed, and a new framework for clinical differentiation of medical associations is presented.Keywords: disk edema, axoplasmic flow, clinical multiplier, optic neuritis, ischemic optic neuropathy, papi...

  3. Isolated Pulmonary Valve Endocarditis

    Directory of Open Access Journals (Sweden)

    Mohammad Ali Hatamizadeh

    2009-06-01

    Full Text Available Infective endocarditis is one of the most severe complications of parenteral drug abuse. The outstanding clinical feature of infective endocarditis in intravenous drug abusers is the high incidence of right-sided valve infection, and the tricuspid valve is involved in 60% to 70% of the cases. We herein report a case of isolated pulmonic valve infective endocarditis with a native pulmonary valve.

  4. Mechanical beam isolator

    International Nuclear Information System (INIS)

    Back-reflections from a target, lenses, etc. can gain energy passing backwards through a laser just like the main beam gains energy passing forwards. Unless something blocks these back-reflections early in their path, they can seriously damage the laser. A Mechanical Beam Isolator is a device that blocks back-reflections early, relatively inexpensively, and without introducing aberrations to the laser beam

  5. Competição entre plantas de arroz e biótipos de capim-arroz (Echinochloa spp. resistente e suscetível ao quinclorac Competition between rice plants and Echinochloa spp. biotypes resistant or susceptible to quinclorac

    Directory of Open Access Journals (Sweden)

    L. Galon

    2009-01-01

    Full Text Available Objetivou-se com este trabalho avaliar a competitividade interespecífica de biótipos de capim-arroz resistente (R e suscetível (S ao herbicida quinclorac com a cultura do arroz irrigado. O experimento foi instalado em casa de vegetação e os tratamentos consistiram em manter uma planta de arroz cv. BRS Pelota no centro da unidade experimental, variando-se na periferia as densidades de capim-arroz em: 0, 1, 2, 3, 4 ou 5 plantas do biótipo R (ITJ-13 ou S (ITJ-17 oriundos da região de Itajaí-SC. O delineamento experimental utilizado foi o completamente casualizado, em esquema fatorial 2 x 6 com quatro repetições. Aos 40 dias após a emergência, foram avaliados as massas fresca e seca e o conteúdo de água de folhas, colmos e total da parte aérea do arroz e do capim-arroz. Houve efeito significativo dos tratamentos para todas as variáveis estudadas quando a cultura do arroz foi cultivada na presença de biótipos de capim-arroz R ou S. Esse efeito foi aditivo na proporção de 1 planta m-2. Entretanto, a capacidade competitiva dos biótipos de capim-arroz resistente e suscetível ao quinclorac, com as plantas de arroz, apresentou comportamento similar quando se variou a densidade de plantas por área.This work aimed to evaluate the interspecific competitiveness of Echinochloa spp. biotypes resistant or susceptible to the herbicide quinclorac. The trial was installed under greenhouse conditions, with the biotypes resistant (ITJ-13 and susceptible (ITJ-17 to quinclorac under competition with the rice plants. The treatments consisted of maintaining one rice plant at the center of the experimental unit, surrounded by 0, 1, 2, 3, 4 or 5 Echinochloa plants, according to the treatment. The trial was arranged in a completely randomized blocks design and factorial scheme 2 x 6, with four replications. Forty days after emergence, fresh dry weights and water content of the shoots were evaluated. There was a significant effect for all the variables

  6. Características morfofisiológicas de biótipos de Euphorbia heterophylla com resistência a diferentes mecanismos de ação herbicida Morphophysiological characteristics of Euphorbia heterophylla biotypes resistant to different herbicide action mechanisms

    Directory of Open Access Journals (Sweden)

    M.M Trezzi

    2009-12-01

    Full Text Available A resistência de plantas daninhas aos herbicidas é um dos maiores entraves da agricultura mundial. No Brasil, Euphorbia heterophylla (EPHHL obtém destaque devido ao fato de apresentar resistência a mais de um mecanismo de ação de herbicidas. O presente trabalho foi conduzido com o objetivo de identificar características morfofisiológicas e a adaptabilidade ecológica entre biótipos de Euphorbia heterophylla com resistência múltipla a inibidores da ALS e Protox e com resistência apenas a inibidores da ALS e suscetível, oriundos da região sudoeste do Paraná. O experimento foi desenvolvido em casa de vegetação. O delineamento utilizado foi o completamente casualizado, com quatro repetições. As características morfofisiológicas avaliadas foram: matéria seca de folhas+cotilédones, de raízes, de caule+pecíolos e total, estatura, número de ramificações por planta, área foliar e número de folhas por planta. Nas determinações efetuadas mais tardiamente, plantas do biótipo S apresentaram menores matérias secas de folhas+cotilédones, caules+pecíolos e total. Plantas do biótipo S também apresentaram menores área foliar, número de ramificações e estatura em avaliações mais tardias, comparativamente aos biótipos R a ALS e R a Protox.Weed resistance to herbicides is one of the major barriers to agriculture worldwide. In Brazil, Euphorbia heterophylla (EPHHL is especially known for presenting resistance to more than one herbicide action mechanism. This work was carried out to identify morphophysiological characteristics and ecological adaptability between Euphorbia heterophylla biotypes with multiple resistance to ALS inhibitors and PROTOX, and with resistance only to ALS inhibitors and susceptible from Southwestern Paraná. The experiment was conducted in a greenhouse and arranged in a completely randomized design, with four replications. The morphophysiological characteristics evaluated were: dry matter of leaves

  7. Bovine viral diarrhea virus: biotypes and disease.

    OpenAIRE

    Deregt, D; Loewen, K G

    1995-01-01

    Bovine viral diarrhea virus continues to produce significant economic losses for the cattle industry and challenges investigators with the complexity of diseases it produces and the mechanisms by which it causes disease. This paper updates and attempts to clarify information regarding the roles of noncytopathic and cytopathic bovine viral diarrhea viruses in persistent infections and mucosal disease. It also covers, in brief, what is known of the new diseases: thrombocytopenia and hemorrhagic...

  8. Genetic traits of Vibrio cholerae O1 Haitian isolates that are absent in contemporary strains from Kolkata, India.

    Directory of Open Access Journals (Sweden)

    Priyanka Ghosh

    Full Text Available The world's worst cholera epidemic in Haiti (2010 coerced to trace the origin and dissemination of the causative agent Vibrio cholerae O1 for proper management of cholera. Sequence analysis of the Haitian strain showed several variations in the genes encoding cholera toxin B subunit (ctxB; toxin-co-regulated pilus (tcpA, repeat in toxins (rtxA, quinolone resistance-determining region (QRDR of gyrase A (gyrA, rstB of RS element along with the change in the number of repeat sequences at the promoter region of ctxAB. Our earlier studies showed that variant tcpA (tcpA CIRS and ctxB (ctxB7 first appeared in Kolkata during 2003 and 2006, respectively. The present study revealed that a variant rtxA was first isolated in Kolkata during 2004 and probably formed the genetic background for the emergence of the ctxB7 allele as we were unable to detect a single strain with the combination of El Tor rtxA and ctxB7. The variant gyrA was first time detected in Kolkata during 1994. The Kolkata strains contained four heptad repeats (TTTTGAT in their CT promoter regions whereas Haitian strains carried 5 heptad repeats. Haitian strains had 3 nucleotide deletions at the rstB gene, which is a unique feature of the classical biotype strains. But the Kolkata strains did not have such deletion mutations in the rstB. Our study demonstrated the existence of some Haitian genetic traits in Kolkata isolates along with the dissimilarities in genomic content with respect to rstB and ctxAB promoter region. Finally, we conclude that Haitian variant strain may be evolved due to sequential event in the Indian subcontinent strain with some cryptic modification in the genome.

  9. Plantaricin IIA-1A5 from Lactobacillus plantarum IIA-1A5 displays bactericidal activity against Staphylococcus aureus.

    Science.gov (United States)

    Arief, I Isnafia; Budiman, C; Jenie, B Sri Laksmi; Andreas, E; Yuneni, A

    2015-01-01

    Plantaricin IIA-1A5 is a bacteriocin produced by Lactobacillus plantarum IIA-1A5 isolated from Indonesian beef. This research aimed to identify the genes involved in plantaricin IIA-1A5 production and examine its mode of action against Staphylococcus aureus. It has been reported that a bacteriocin structural gene, plnW, is present in genome of L. plantarum IIA-1A5. Here, we reported the presence of additional genes responsible for plantaricin precursor (plnA and plnEF) and a gene encoding the quorum sensor of histidine kinase (plnB). It indicates that genes involved in production of plantaricin IIA-1A5 are organized in at least two bacteriocin operons (plnABCD, plnEFI) and a structural plnW gene. Purified plantaricin IIA-1A5 yielded a single band in SDS-PAGE with apparent size of 6.4 kDa. Amino acid composition of purified plantaricin IIA-1A5 was mainly composed of cationic glutamic acid and cysteine that allowed the formation of disulphide bonds, suggesting plantaricin IIA-1A5 belongs to the pediocin-subclass of class II bacteriocins. Plantaricin IIA-1A5 displayed remarkable antibacterial activity against S. aureus, which was initiated by the adsorption of plantaricin IIA-1A5 onto the cell membrane of S. aureus. The adsorption is hypothesised to be facilitated by non-ionic interactions as it is reduced by the presence of organic solvents or detergents. This adsorption promoted leakage of cellular metabolites through the cell membrane of S. aureus, as indicated by the release of genetic and proteinaceous material of S. aureus observed at 260 and 280 nm, respectively. The leakage also promoted the release of divalent (Ca(2+), Mg(2+)) and monovalent (K(+)) cations. The release of these intracellular components might be due to pores formed in the cell membrane of S. aureus by plantaricin IIA-1A5 as shown by scanning electron microscopy. Altogether, the mode of action of plantaricin IIA-1A5 against S. aureus seems to be bactericidal as indicated by lysis of the cell

  10. Toxicity of neem oil to Bemisia tabaci biotype B nymphs reared on dry bean Toxicidade de óleo de nim para ninfas de Bemisia tabaci biótipo B criadas em feijoeiro

    Directory of Open Access Journals (Sweden)

    Patricia Valle Pinheiro

    2009-04-01

    Full Text Available The objective of this work was to determine the most susceptible nymphal stage of Bemisia tabaci biotype B to neem (Azadirachta indica A. Juss. oil applied to dry bean (Phaseolus vulgaris L. in a screenhouse. A solution of commercial oil (Dalneem extracted from neem seeds was sprayed directly on each nymphal instar at 0, 0.1, 0.25, 0.5, 1 and 2% concentrations for lethal concentration (LC determination, and at 0, 0.5 and 1% concentrations for lethal time (LT determination. The number of living and dead nymphs was recorded five days after spraying for LC determination, and daily during six days for LT determination. The LC50 estimated for fourth instar nymphs occurred at 0.56% concentration. For all instars, LC50 and LC95 were estimated at 0.32 and 2.78% concentrations, respectively. The estimated values of LT50 at 1% concentration were 2.46, 4.45, 3.02 and 6.98 days for the first to fourth instars, respectively. The LT50 occurred at five days for 0.5% and at four days for 1% concentration in all instars. A mortality rate of over 80% was observed on the 6th day for the first to third instars at 1% concentration. The first three nymphal stages were more susceptible to neem oil when compared to the fourth nymphal stage.O objetivo deste trabalho foi determinar o estágio ninfal de Bemisia tabaci biótipo B mais suscetível ao óleo de nim (Azadirachta indica A. Juss. aplicado em feijoeiro (Phaseolus vulgaris L., em casa telada. Foram avaliados o tempo letal (TL e concentração letal (CL do óleo comercial de sementes de nim Dalneem. Para CL, concentrações de 0, 0,1, 0,25, 0,5, 1 e 2% do produto foram pulverizadas diretamente sobre as ninfas em cada ínstar. Para TL, o produto foi avaliado a 0, 0,5 e 1% de óleo de nim em cada ínstar. Ninfas vivas e mortas foram contadas cinco dias após a pulverização para CL e diariamente para TL durante seis dias. Para o quarto ínstar, a CL50 foi de 0,56% de óleo de nim. Considerando todos os ínstares, CL

  11. Indutores de resistência à mosca-branca Bemisia tabaci Biótipo B (GENN., 1889 (Hemiptera: Aleyrodidae em soja Resistance inducers to the whitefly Bemisia tabaci Biotype B (GENN., 1889 (Hemiptera: Aleyrodidae in soybeans

    Directory of Open Access Journals (Sweden)

    Jair Campos Moraes

    2009-10-01

    Full Text Available Objetivou-se, neste trabalho, avaliar o efeito da aplicação de indutores na resistência de duas cultivares de soja à mosca-branca Bemisia tabaci biótipo B. O experimento foi conduzido no Departamento de Entomologia - UFLA. As sementes de soja, cultivar IAC-19 e MONSOY-8001, foram previamente tratadas com o fungicida captan. Foram testados os seguintes tratamentos: T1- irrigação no solo, ao redor das plantas de cada vaso, de 250 mL de solução de ácido silícico a 1%; T2- pulverização das plantas, até o ponto de escorrimento, com solução a 0,3% de acibenzolar-s-methyl; T3- pulverização das plantas, até o ponto de escorrimento, com calda a 0,24% de pyraclostrobin+epoxiconazole e T4- testemunha. As plantas foram infestadas com 100 adultos da mosca-branca por vaso que liberados oito dias após a aplicação dos tratamentos. Avaliaram-se o número de ovos na face abaxial de cada folha, que foi marcada para posterior avaliação de ninfas; teores de taninos e de lignina; peso seco das raízes e da parte aérea. Não houve diferença para número de ovos e ninfas entre as cultivares de soja, porém, a viabilidade média de B. tabaci foi menor a cultivar IAC-19. O cultivar de soja IAC-19 demonstrou moderada resistência ao biótipo B de B. tabaci. A aplicação de silício ou acibenzolar-s-methyl induz um aumento no teor de lignina na cultivar de soja IAC-19.The objective of this paper was to evaluate the effect of the application of inducers on the resistance of two soybean cultivars to the whitefly B. tabaci Biotype B. The experiment was carried out at the Entomology Department - UFLA. The soybean seeds of cultivars IAC-19 and MONSOY-8001 were previously treated with Captan fungicide. The following treatments were tested: T1- irrigating the soil around the plants of each pot with 250 mL of solution of 1% silicic acid; T2- spraying of the plants, to the 'point of dripping', with a solution of 0.3% acibenzolar-s-methyl; T3- spraying of

  12. Minimum Data Set Q1a Report

    Data.gov (United States)

    U.S. Department of Health & Human Services — The MDS Q1a report summarizes, by state and county, percentages of residents that answered Yes to Q1a - Residents expresses or indicates preference to return to the...

  13. Efecto del glifosato sobre el crecimiento y acumulación de azúcares libres en dos biotipos de lolium perenne de distinta sensibilidad al herbicida Glyphosate effects on the growth and free sugar accumulation of two lolium perenn e biotypes with different herbicide sensitivity

    Directory of Open Access Journals (Sweden)

    M. Yanniccari

    2012-03-01

    glyphosate on the growth and free sugar accumulation of two Lolium perenne biotypes of low and high glyphosate sensitivity. It was worked with clones of both types, in tillering, sprayed with 1,440 g a.e. ha-1 of glyphosate as treatments and without herbicide as controls. The glyphosate effects on the regrowth of leaves was studied until 50 hours post-application and on total free sugar, reducing free sugar and nonreducing free sugar from leaves to 1, 2, 3 and 5 days post-application were periodically evaluated. From 25 hours after glyphosate application, it caused on the susceptible biotype a growth decrease of 58% and an accumulation of free sugar above 90% compared to controls. In susceptible biotypes, growth inhibition does not depend on a reduced photoassimilate translocation from the overground part. Therefore, the free sugar accumulation in leaves could be explained by the fall in the rate of growth. These effects are limited in the low sensitivity biotype, where growth inhibition has not been detected.

  14. Susceptibilidade de lagartas dos biótipos milho e arroz de Spodoptera frugiperda (J.E. Smith, 1797 (Lepidoptera: Noctuidae a inseticidas com diferentes modos de ação Susceptibility of caterpillars of the biotypes corn and rice of Spodoptera frugiperda (J.E. Smith, 1797 (Lepidoptera: Noctuidae to insecticides with different action manners

    Directory of Open Access Journals (Sweden)

    Gustavo Rossato Busato

    2006-02-01

    Full Text Available O objetivo do trabalho foi avaliar a susceptibilidade de lagartas dos biótipos milho e arroz de Spodoptera frugiperda, a inseticidas com diferentes modos de ação. Os insetos foram coletados em milho e em arroz irrigado no agroecossistema de várzea, município de Pelotas, região que produz milho e arroz irrigado (lado a lado. Os experimentos foram realizados, em condições controladas de temperatura (25 ± 1°C, umidade relativa (70 ± 10% e fotofase (14 horas, utilizando-se folhas do híbrido de milho Pionner 30F33 (40 dias após a emergência. As folhas pulverizadas em torre de Potter calibrada para aplicação de um volume de calda de 1,7 ± 0,305mg cm-2, foram colocadas em recipientes de plásticos com tampa, sendo individualizadas 25 lagartas de 3° ínstar de cada biótipo de S. frugiperda. Os inseticidas e concentrações avaliados foram: clorpirifós [Lorsban 480 BR, 0,960g i.a. L-1 (Organofosforado], lambda-cialotrina [Karate Zeon 50 CE, 0,003g i.a. L-1 (Piretróide sintético], lufenuron [Match CE, 0,006g i.a. L-1 (Aciluréia], methoxifenozide [Intrepid 240 SC, 0,158g i.a. L-1 (Diacilhidrazina] e spinosad [Tracer, 0,960g i.a. L-1 (Naturalyte]. A avaliação da mortalidade foi realizada 24, 48, 72, 96 e 120 horas após o tratamento. O biótipo milho de S. frugiperda foi menos suscetível aos inseticidas lambda-cialotrina, lufenuron e methoxifenozide. Os inseticidas clorpirifós e spinosad foram eficientes no controle das lagartas dos biótipos milho e arroz de S. frugiperda.The objective of this work was to evaluate the susceptibility of caterpillars of the biotypes corn and rice of Spodoptera frugiperda, to insecticides with different action manners. The insects were collected in corn and in irrigated rice in the lowland, county of Pelotas, area that produces corn and irrigated rice (side by side. The experiments were conducted, in controlled conditions of temperature (25 ± 1°C, relative humidity (70 ± 10% and photophase (14

  15. Effect of bean genotypes, insecticides, and natural products on the control of Bemisia tabaci (Gennadius biotype B (Hemiptera: Aleyrodidae and Caliothrips phaseoli (Hood (Thysanoptera: Thripidae = Efeito de genótipos de feijoeiro, inseticida e produtos naturais no controle Bemisia tabaci (Gennadius biotipo B (Hemiptera: Aleyrodidae e Caliothrips phaseoli (Hood (Thysanoptera: Thripidae

    Directory of Open Access Journals (Sweden)

    Júlio Cesar Janini

    2011-07-01

    Full Text Available Effect of bean genotypes, insecticides, and natural products on the control of Bemisia tabaci (Gennadius biotype B (Hemiptera: Aleyrodidae and Caliothrips phaseoli (Hood (Thysanoptera: Thripidae. The influence of bean genotypes associated with neem oil as insecticide was evaluated to control B. tabaci (Gennadius biotype B and C. phaseoli (Hood during the wet season sowing. The experimental design used was the randomized block arrangement in a 4x4x3 factorial scheme, represented by genotypes, neem oil and insecticides respectively, with three replications. The genotypes Carioca, IAC Harmonia, IAC Centauro and Pérola were used. The evaluations were done at 14 and 42 days after seedling emergence, bycounting B. tabaci biotype B eggs and nymphs and C. phaseoli nymphs in the genotypes leaf. Conclusion: The B. tabaci biotype B eggs and nymphs number were smaller in IAC Centauro and higher in IAC Harmonia. The tested genotypes were similarly infested by C. phaseoli. IAC Centauro and IAC Harmonia genotypes associated with neem oil (highlighting the full dose – 1% provided lower number of whitefly eggs and thrips nymphs. Neem oil at the full dose alsoreduced whitefly nymph number. In the tested genotypes the insecticide provided reduction in the number of whitefly eggs and nymphs as well in the thrips nymphs, with increase in therecommend dose. Avaliou-se a influência de genótipos de feijoeiro associado à aplicação de óleo de nim e inseticida no controle de B. tabaci (Gennadius biótipo B e C. phaseoli (Hood na época de semeadura “das águas”. O delineamento experimental utilizados foi o de blocos casualizados dispostos em um esquema fatorial 4 x 3 x 3, representado por variedades, óleo de nim e inseticidas, respectivamente, com três repetições. Utilizaram-se os genótipos Carioca, IAC Harmonia, IAC Centauro e Pérola. As avaliações foram realizadas dos 14 aos 42 dias após a emergência das plantas, contando-se o número de ovos e

  16. Comparison of electrophoretic protein profiles of Campylobacter jejuni subsp. jejuni isolated from different animal species Comparação dos perfis eletroforéticos de proteínas de Campylobacter jejuni subsp. jejuni isoladas de diferentes espécies animais

    Directory of Open Access Journals (Sweden)

    Eliana Scarcelli

    2001-12-01

    Full Text Available Electrophoretic protein profiles of Campylobacter jejuni subsp. jejuni strains isolated from feces of seven animal species, including man, were compared. Fourteen strains (two from each species plus two human strains and the reference one, were ruptured by ultrasound and their total soluble proteins were analyzed by SDS-PAGE technique in a 12% polyacrylamide gel with computerized densitometric reading by the molecular analyst software. All the strains had bands in common that correspond to 45 and 66 Kda molecular weight. The disagreement corresponded to a 97 to 200 Kda molecular weight region. From the 17 strains, 13 (76.5%, were classified as biotype I, three (17.6% as biotype II and one (5.8% as biotype III. Since protein extracts were obtained from cells grown under identical conditions, and thus, able to express the same phenotype, this disagreement region could be related to different genotypes or serotypes.Perfis eletroforéticos de proteínas de cepas Campylobacter jejuni subsp. jejuni isoladas de fezes de diferentes espécies animais, inclusive o homem, foram comparados. Quatorze cepas (duas de cada espécie mais duas cepas de origem humana e a cepa de referência foram rompidas por ultra-som e suas proteínas solúveis totais analisadas através das técnicas de SDS-PAGE em gel de poliacrilamida a 12% e análise densitométrica. Todas as cepas tinham em comum bandas que migraram em regiões que correspondiam ao peso molecular de 45 e 66 Kda. As regiões discordantes correspondiam principalmente às regiões entre 97 e 200 Kda. Das 17 cepas, 13 (76.5%, foram classificadas como biotipo I, três (17.6% como biotipo II e uma (5.8% como biotipo III. Uma vez que os extratos de proteínas foram obtidos de células que se desenvolveram sob condições idênticas, possibilitando a expressão do mesmo fenótipo, estas regiões protéicas discordantes poderiam estar relacionadas a diferentes sorotipos ou genótipos.

  17. Beyond Insulation and Isolation

    DEFF Research Database (Denmark)

    Højlund, Marie Koldkjær

    2016-01-01

    insulation and isolation strategies to reduce measurable and perceptual noise levels. However, these strategies are unsuited to support the need to feel as an integral part of the shared hospital environment. This article suggests that the gap is intimately linked to a reductionist framework underlying the......Most research on the acoustic environment in the Western modern hospital identifies raised noise levels as the main causal explanation for the ranking of noise as critical stressors for patients, relatives and staffs. Therefore the most widely used strategies to tackle the problem in practice are...

  18. NORMOLIPEMIC ISOLATED XANTHOMA

    Directory of Open Access Journals (Sweden)

    Gowri Sankar

    2013-10-01

    Full Text Available ABSTRACT: Xanthomas are often a manifestation of underlying lipid abnormalities.A 17 - year - old female presented to our hospital with pain and swelling over t he left knee joint.Routine investigations and lipid profile were normal. Dermatological examination and Psychiatric examination were done and found to be normal. Histopathology from the lesion revealed macrophages and Touton type of giant cells. We present a case of normolipemic isolated xanthoma, which not only is an an uncommon occurrence but also needs a regular follow up because a high association with reticuloendothelial malignancies has also been reported.

  19. Diabetes in Population Isolates

    DEFF Research Database (Denmark)

    Grarup, Niels; Moltke, Ida; Albrechtsen, Anders;

    2016-01-01

    Type 2 diabetes (T2D) is an increasing health problem worldwide with particularly high occurrence in specific subpopulations and ancestry groups. The high prevalence of T2D is caused both by changes in lifestyle and genetic predisposition. A large number of studies have sought to identify...... on glucose-stimulated plasma glucose, serum insulin levels, and T2D. The variant defines a specific subtype of non-autoimmune diabetes characterized by decreased post-prandial glucose uptake and muscular insulin resistance. These and other recent findings in population isolates illustrate the value...

  20. Isolation of RNP granules

    DEFF Research Database (Denmark)

    Jønson, Lars; Nielsen, Finn Cilius; Christiansen, Jan

    2011-01-01

    be regarded as a supramolecular assembly of RNA and protein, probably representing several overlapping post-transcriptional operons. The present protocol describes how RNP granules may be isolated by the transgenic expression of a 3X FLAG version of an RNA-binding protein under tetracycline control...... via the tetracycline receptor/operator complex. In this way, inclusion of an appropriate tetracycline concentration ensures expression of the tagged version at the endogenous level, and the 3X FLAG tag is a convenient "handle" for the subsequent immunoprecipitation by immobilized anti-FLAG antibody....

  1. Journey from isolation

    Directory of Open Access Journals (Sweden)

    Wim A. Dreyer

    2011-06-01

    Full Text Available Since the Ottawa Consultation in 1982, the relationship between the Nederduitsch Hervormde Kerk van Afrika (NHKA and the World Alliance of Reformed Churches (WARC was nonexistent. In the NHKA it became progressively clear that it would be impossible to travel the road of faith alone. This article examined the factors which contributed to the growing isolation of the NHKA, especially nationalism, a particularistic ecclesiology and the rejection of Apartheid by international ecumenical bodies. It also reflected on efforts of the NHKA to return to the international ecumenical movement.

  2. How isolated is Antarctica?

    Science.gov (United States)

    Clarke, Andrew; Barnes, David K A; Hodgson, Dominic A

    2005-01-01

    The traditional view of Antarctica and the surrounding Southern Ocean as an isolated system is now being challenged by the recent discovery at the Antarctic Peninsula of adult spider crabs Hyas areneus from the North Atlantic and of larvae of subpolar marine invertebrates. These observations question whether the well described biogeographical similarities between the benthic fauna of the Antarctic Peninsula and the Magellan region of South America result from history (the two regions were once contiguous), or from a previously unrecognized low level of faunal exchange. Such exchange might be influenced by regional climate change, and also exacerbated by changes in human impact. PMID:16701330

  3. Schizosaccharomyces isolation method

    Directory of Open Access Journals (Sweden)

    Benito Santiago

    2014-01-01

    Full Text Available This study discusses the optimization of a selective and differential medium which would facilitate the isolation of Schizosaccharomyces (a genus with a low incidence compared to other microorganisms to select individuals from this genus for industrial purposes, especially in light of the recent recommendation of the use of yeasts from this genus in the wine industry by the International Organisation of Vine and Wine, or to detect the presence of such yeasts, for those many authors who consider them food spoilers. To this end, we studied various selective differential agents based on the main physiological characteristics of these species, such as their high resistances to high concentrations of sugar, sulfur dioxide, sorbic acid, benzoic acid, acetic acid or malo ethanolic fermentation. This selective medium is based on the genus resistance to the antibiotic actidione and its high resistance to inhibitory agents such as benzoic acid. Malic acid was used as a differential factor due to the ability of this genus to metabolise it to ethanol, which allows detecting of the degradation of this compound. Lastly, the medium was successfully used to isolate strains of Schizosaccharomyces pombe from honey and honeycombs.

  4. Genetic and antigenic characterization of bovine viral diarrhea viruses isolated from cattle in Hokkaido, Japan.

    Science.gov (United States)

    Abe, Yuri; Tamura, Tomokazu; Torii, Shiho; Wakamori, Shiho; Nagai, Makoto; Mitsuhashi, Kazuya; Mine, Junki; Fujimoto, Yuri; Nagashima, Naofumi; Yoshino, Fumi; Sugita, Yukihiko; Nomura, Takushi; Okamatsu, Masatoshi; Kida, Hiroshi; Sakoda, Yoshihiro

    2016-01-01

    In our previous study, we genetically analyzed bovine viral diarrhea viruses (BVDVs) isolated from 2000 to 2006 in Japan and reported that subgenotype 1b viruses were predominant. In the present study, 766 BVDVs isolated from 2006 to 2014 in Hokkaido, Japan, were genetically analyzed to understand recent epidemics. Phylogenetic analysis based on nucleotide sequences of the 5'-untranslated region of viral genome revealed that 766 isolates were classified as genotype 1 (BVDV-1; 544 isolates) and genotype 2 (BVDV-2; 222). BVDV-1 isolates were further divided into BVDV-1a (93), 1b (371) and 1c (80) subgenotypes, and all BVDV-2 isolates were grouped into BVDV-2a subgenotype (222). Further comparative analysis was performed with BVDV-1a, 1b and 2a viruses isolated from 2001 to 2014. Phylogenetic analysis based on nucleotide sequences of the viral glycoprotein E2 gene, a major target of neutralizing antibodies, revealed that BVDV-1a, 1b and 2a isolates were further classified into several clusters. Cross-neutralization tests showed that BVDV-1b isolates were antigenically different from BVDV-1a isolates, and almost BVDV-1a, 1b and 2a isolates were antigenically similar among each subgenotype and each E2 cluster. Taken together, BVDV-1b viruses are still predominant, and BVDV-2a viruses have increased recently in Hokkaido, Japan. Field isolates of BVDV-1a, 1b and 2a show genetic diversity on the E2 gene with antigenic conservation among each subgenotype during the last 14 years.

  5. Genetic and antigenic characterization of bovine viral diarrhea viruses isolated from cattle in Hokkaido, Japan.

    Science.gov (United States)

    Abe, Yuri; Tamura, Tomokazu; Torii, Shiho; Wakamori, Shiho; Nagai, Makoto; Mitsuhashi, Kazuya; Mine, Junki; Fujimoto, Yuri; Nagashima, Naofumi; Yoshino, Fumi; Sugita, Yukihiko; Nomura, Takushi; Okamatsu, Masatoshi; Kida, Hiroshi; Sakoda, Yoshihiro

    2016-01-01

    In our previous study, we genetically analyzed bovine viral diarrhea viruses (BVDVs) isolated from 2000 to 2006 in Japan and reported that subgenotype 1b viruses were predominant. In the present study, 766 BVDVs isolated from 2006 to 2014 in Hokkaido, Japan, were genetically analyzed to understand recent epidemics. Phylogenetic analysis based on nucleotide sequences of the 5'-untranslated region of viral genome revealed that 766 isolates were classified as genotype 1 (BVDV-1; 544 isolates) and genotype 2 (BVDV-2; 222). BVDV-1 isolates were further divided into BVDV-1a (93), 1b (371) and 1c (80) subgenotypes, and all BVDV-2 isolates were grouped into BVDV-2a subgenotype (222). Further comparative analysis was performed with BVDV-1a, 1b and 2a viruses isolated from 2001 to 2014. Phylogenetic analysis based on nucleotide sequences of the viral glycoprotein E2 gene, a major target of neutralizing antibodies, revealed that BVDV-1a, 1b and 2a isolates were further classified into several clusters. Cross-neutralization tests showed that BVDV-1b isolates were antigenically different from BVDV-1a isolates, and almost BVDV-1a, 1b and 2a isolates were antigenically similar among each subgenotype and each E2 cluster. Taken together, BVDV-1b viruses are still predominant, and BVDV-2a viruses have increased recently in Hokkaido, Japan. Field isolates of BVDV-1a, 1b and 2a show genetic diversity on the E2 gene with antigenic conservation among each subgenotype during the last 14 years. PMID:26400674

  6. The Alpha-1A Adrenergic Receptor in the Rabbit Heart.

    Directory of Open Access Journals (Sweden)

    R Croft Thomas

    Full Text Available The alpha-1A-adrenergic receptor (AR subtype is associated with cardioprotective signaling in the mouse and human heart. The rabbit is useful for cardiac disease modeling, but data on the alpha-1A in the rabbit heart are limited. Our objective was to test for expression and function of the alpha-1A in rabbit heart. By quantitative real-time reverse transcription PCR (qPCR on mRNA from ventricular myocardium of adult male New Zealand White rabbits, the alpha-1B was 99% of total alpha-1-AR mRNA, with <1% alpha-1A and alpha-1D, whereas alpha-1A mRNA was over 50% of total in brain and liver. Saturation radioligand binding identified ~4 fmol total alpha-1-ARs per mg myocardial protein, with 17% alpha-1A by competition with the selective antagonist 5-methylurapidil. The alpha-1D was not detected by competition with BMY-7378, indicating that 83% of alpha-1-ARs were alpha-1B. In isolated left ventricle and right ventricle, the selective alpha-1A agonist A61603 stimulated a negative inotropic effect, versus a positive inotropic effect with the nonselective alpha-1-agonist phenylephrine and the beta-agonist isoproterenol. Blood pressure assay in conscious rabbits using an indwelling aortic telemeter showed that A61603 by bolus intravenous dosing increased mean arterial pressure by 20 mm Hg at 0.14 μg/kg, 10-fold lower than norepinephrine, and chronic A61603 infusion by iPRECIO programmable micro Infusion pump did not increase BP at 22 μg/kg/d. A myocardial slice model useful in human myocardium and an anthracycline cardiotoxicity model useful in mouse were both problematic in rabbit. We conclude that alpha-1A mRNA is very low in rabbit heart, but the receptor is present by binding and mediates a negative inotropic response. Expression and function of the alpha-1A in rabbit heart differ from mouse and human, but the vasopressor response is similar to mouse.

  7. Patients experience of source isolation

    DEFF Research Database (Denmark)

    Johansen, Kamilla; Pedersen, Didde; Kragbak, Nina;

    2013-01-01

    to the patients, and it is important to gain insight in the patients perspectives of being isolated, to develop treatment and caring strategies that may reduce the negative side effects of isolation. Aim: To make a systematic literature review, and analyse the literature to describe the state of the art knowledge...... and older and articles were peer reviewed. 11 articles were included and analysed by means of systematic text condensation. Results: Five themes were found; (1) Insufficient information, (2) Quality of care, (3) Physical environment, (4) Importance of relatives and (5) Psychological consequence....... The design of the ward with a balance between source isolation and visual and communicative opening to the outside is important to reduce the negative impact from isolation. Keywords: literature review, isolation, source isolation, patients experiences, patients perspectives, depression, coping, information...

  8. Candiduria in a public hospital of São Paulo (1999-2004: characteristics of the yeast isolates Candiduria em hospital público de São Paulo (1999-2004: características das leveduras isoladas

    Directory of Open Access Journals (Sweden)

    Elza Helena da Silva

    2007-12-01

    Full Text Available The study involved 100 yeast isolates, obtained from urine samples provided by a Public Pediatric Hospital of São Paulo, Brazil, from 1999 to 2004. The most frequent species was Candida albicans, followed by C. tropicalis, C. glabrata and C. parapsilosis. In regard to virulence, 97% of the isolates showed index 3 for proteinase and 63% index 2 for phospholipase. The most frequent killer biotypes were 511 and 888.Estudou-se 100 amostras de leveduras, isoladas de urina, provenientes de Hospital Público Infantil de São Paulo Brasil, no período de 1999-2004. A espécie mais freqüente foi Candida albicans, seguida de C. tropicalis, C. glabrata e C. parapsilosis. Em relação à virulência, 97% dos isolados apresentaram índice 3 para proteinase e, 63% índice 2 para fosfolipase. Os biótipos "killer" mais freqüentes foram o 511 e 888.

  9. Isolation and the parish ministry

    OpenAIRE

    Irvine, Andrew R.

    1989-01-01

    The purpose of this thesis was to examine the concept of isolation as it occurs within the profession of ministry. Isolation, for the purpose of this thesis, is defined social-psychologically. Within the field research isolation is considered as evidenced professionally, socially and spiritually. This study utilized as its sample base 200 hundred Church of Scotland ministers (15% of total population) which provided 159 usable responses to an extensive mail survey. The mai...

  10. A hybrid base isolation system

    Energy Technology Data Exchange (ETDEWEB)

    Hart, G.C. [Univ. of California, Los Angeles, CA (United States); Lobo, R.F.; Srinivasan, M. [Hart Consultant Group, Santa Monica, CA (United States); Asher, J.W. [kpff Engineers, Santa Monica, CA (United States)

    1995-12-01

    This paper proposes a new analysis procedure for hybrid base isolation buildings when considering the displacement response of a base isolated building to wind loads. The system is considered hybrid because of the presence of viscous dampers in the building above the isolator level. The proposed analysis approach incorporates a detailed site specific wind study combined with a dynamic nonlinear analysis of the building response.

  11. Structure-function elucidation of a new alpha-Conotoxin, Lo1a, from Conus longurionis.

    Digital Repository Service at National Institute of Oceanography (India)

    Lebbe, E.K.M.; Peigneur, S.; Maiti, M.; PrabhaDevi; Ravichandran, S.; Lescrinier, E.; Ulens, C.; Waelkens, E.; DeSouza, L.; Herdewijn, P.; Tytgat, J.

    such as epilepsy, myasthenic syndromes, schizophrenia, Parkinson disease, and Alzheimer disease. To expand the knowledge concerning cone snail toxins, we examined the venom of Conus longurionis. We isolated an 18-amino acid peptide named Alpha-conotoxin Lo1a, which...

  12. Isolated Pelvic Hyperthermochemotherapeutic Perfusion -An Experimental Study on Isolating Efficacy

    Institute of Scientific and Technical Information of China (English)

    2000-01-01

    Hyperthermochemotherapeutic perfusion model through isolated pelvic vessels was developed to evaluate the leakage of hyperthermia and drugs (such as adriamycin) from the isolated pelvic circulation to systemic circulation and its associated side/toxic effects. The isolated pelvic circulation was perfused through a femoral artery catheter with hyperthermic (48 ℃ to 55 ℃) adriamycin solution (50 μg/ml) for 30 min. The efflux was drained through a femoral vein catheter. And the pelvic temperature was kept at the level of 43±0.5 ℃. The temperature of pelvic circulation was kept at 4 ℃ to 5 ℃ greater than the systemic/core temperature. The adriamycin concentration of pelvic efflux was 12 to 46 folds of that of systemic serum. The difference between them was very significant (P<0.001). As the perfusion pressure was increased, which kept lower than the mean systemic artery pressure, the leakage of the adriamycin from the isolated pelvic circulation to systemic circulation was increased, but there was no significant difference between them (P>0.05). During isolated perfusion, the systemic blood dynamics remained stable and there were no organic injuries on the important organs. It was suggested that the isolating efficacy of the modality of isolated pelvic hyperthermochemotherapeutic perfusion through vessels was rather high. The hyperthermia and drugs could be effectively limited in the isolated pelvic region with minor side effects on the systemic circulation and important organs.

  13. Main: PE2FNTRNR1A [PLACE

    Lifescience Database Archive (English)

    Full Text Available PE2FNTRNR1A S000455 29-November-2004 (last modified) kehi pE2F (proximal E2F elemen...of the cell cycle; Important for regulating specific RNR1a (ribonucleotide reductase large subunit) gene exp

  14. Catalogues of isolated galaxies, isolated pairs, and isolated triplets in the local Universe

    CERN Document Server

    Argudo-Fernández, M; Bergond, G; Puertas, S Duarte; Carmona, E Ramos; Sabater, J; Lorenzo, M Fernández; Espada, D; Sulentic, J; Ruiz, J E; Leon, S

    2015-01-01

    The construction of catalogues of galaxies and the posterior study of galaxy properties in relation to their environment, have been hampered by the scarce redshift information. The new 3-dimensional (3D) surveys permits to distinguish small, faint, physically bound satellites from a background projected galaxy population, giving a more comprehensive 3D picture of the surroundings. We aim to provide representative samples of isolated galaxies, isolated pairs, and isolated triplets for testing galaxy evolution and secular processes in low density regions of the local Universe, as well as to characterise their local and large-scale environments. We use spectroscopic data from the SDSS to automatically and homogeneously compile catalogues of 3,702 isolated galaxies, 1,240 isolated pairs, and 315 isolated triplets in the local Universe. To quantify the effects of their local and large-scale environments, we compute the projected density and the tidal strength for the brightest galaxy in each sample. We find eviden...

  15. Seismic isolation for Advanced LIGO

    CERN Document Server

    Abbott, R; Allen, G; Cowley, S; Daw, E; Debra, D; Giaime, J; Hammond, G; Hammond, M; Hardham, C; How, J; Hua, W; Johnson, W; Lantz, B; Mason, K; Mittleman, R; Nichol, J; Richman, S; Rollins, J; Shoemaker, D; Stapfer, G; Stebbins, R

    2002-01-01

    The baseline design concept for a seismic isolation component of the proposed 'Advanced LIGO' detector upgrade has been developed with proof-of-principle experiments and computer models. It consists of a two-stage in-vacuum active isolation platform that is supported by an external hydraulic actuation stage. Construction is underway for prototype testing of a full-scale preliminary design.

  16. Improved Active Vibration Isolation Systems

    Institute of Scientific and Technical Information of China (English)

    2007-01-01

    The control force, feedback gain, and actuator stroke of several active vibration isolation systems were analyzed based on a single-layer active vibration isolation system. The analysis shows that the feedback gain and actuator stroke cannot be selected independently and the active isolation system design must make a compromise between the feedback gain and actuator stroke. The performance of active isolation systems can be improved by the joint vibration reduction using an active vibration isolation system with an adaptive dynamic vibration absorber. The results show that the joint vibration reduction method can successfully avoid the compromise between the feedback gain and actuator stroke. The control force and the object vibration amplitude are also greatly reduced.

  17. Evaluation of phenotypic and genotypic methods for epidemiological typing of Staphylococcus aureus isolates from bovine mastitis in Denmark

    DEFF Research Database (Denmark)

    Aarestrup, Frank Møller; Wegener, H. C.; Rosdahl, V. T.

    1995-01-01

    The value of five different typing methods (antibiogram typing, biotyping, phage typing, plasmid profiling and restriction fragment length polymorphism of the gene encoding 16S and 23S ribosomal RNA (ribotyping)), in discriminating 105 Staphylococcus aureus strains from bovine milk samples obtained...... (75%) of the 20 antibiotic resistant strains. Biotyping assigned the strains to 14 different types, with the most common type accounting for 25.7% of the strains. Ninety eight (93.3%) strains could be typed by phages, assigning them to 19 different phage types. The predominant phage type accounted...... for 31.4% of the strains. Eight different plasmid profiles was observed among 24 (23%) strains harbouring plasmids. Ribotyping yielded 30 different types, with the most common accounting far 29.5% of the strains. The single most discriminatory typing method was ribotyping (0.863) followed by biotyping (0...

  18. RNA1-Independent Replication and GFP Expression from Tomato marchitez virus Isolate M Cloned cDNA.

    Science.gov (United States)

    Ferriol, I; Turina, M; Zamora-Macorra, E J; Falk, B W

    2016-05-01

    Tomato marchitez virus (ToMarV; synonymous with Tomato apex necrosis virus) is a positive-strand RNA virus in the genus Torradovirus within the family Secoviridae. ToMarV is an emergent whitefly-transmitted virus that causes important diseases in tomato (Solanum lycopersicum) in Mexico. Here, the genome sequence of the ToMarV isolate M (ToMarV-M) was determined. We engineered full-length cDNA clones of the ToMarV-M genomic RNA (RNA1 and RNA2), separately, into a binary vector. Coinfiltration of both triggered systemic infections in Nicotiana benthamiana, tomato, and tomatillo (Physalis philadelphica) plants and recapitulated the biological activity of the wild-type virus. The viral progeny generated from tomato and tomatillo plants were transmissible by the whitefly Bemisia tabaci biotype B. Also, we assessed whether these infectious clones could be used for screening tomato cultivars for resistance to ToMarV and our results allowed us to differentiate resistant and susceptible tomato lines. We demonstrated that RNA1 of ToMarV-M is required for the replication of RNA2, and it can replicate independently of RNA2. From this, ToMarV-M RNA2 was used to express the green fluorescent protein in N. benthamiana plants, which allowed us to track cell-to-cell movement. The construction of full-length infectious cDNA clones of ToMarV-M provides an excellent tool to investigate virus-host-vector interactions and elucidate the functions of torradovirus-encoded proteins or the mechanisms of replication of torradovirus genomic RNA. PMID:26756828

  19. Relationship between panicle differentiation and main stem leaf number in rice genotypes and red rice biotypes Relação entre diferenciação da panícula e número de folhas no colmo principal em genótipos de arroz e biótipos de arroz vermelho

    Directory of Open Access Journals (Sweden)

    Nereu Augusto Streck

    2009-04-01

    Full Text Available Panicle differentiation (DP is a key developmental stage in rice (Oryza sativa L. because at this stage plant switches from vegetative to reproductive development and source-sink relation changes to allocate part of the photoassimilates for growing spikelets and kernels. The objective of this study was to determine the main stem Haun Stage (HS and the number of leaves that still have to emerge until flag leaf at PD in several cultivated rice genotypes and red rice biotypes in different sowing dates. A two-year field experiment was conducted in Santa Maria, Rio Grande do Sul State, Brazil, during the 2005-2006 and 2006-2007 growing seasons, and three sowing dates each year. Nine cultivated rice genotypes and two red rice biotypes were used. PD was identified as the R1 stage of the COUNCE scale, by sampling four plants from each genotype on a daily basis. When 50% of the sampled plants were at R1, the main stem HS was measured in 20 plants per genotype. The main stem final leaf number (FLN was measured in these 20 plants when the collar of the flag leaf was visible. HS at PD is related to FLN in many cultivated rice genotypes and red rice biotypes, and that at PD, the number of leaves still to emerge until flag leaf is not constant for all the rice genotypes. These findings are not in agreement with reports in the literature.A diferenciação da panícula (DP é um importante estágio do desenvolvimento em arroz (Oryza sativa L., pois é nesse estágio que a planta passa do desenvolvimento vegetativo para o desenvolvimento reprodutivo e a relação fone-dreno muda para alocar parte dos fotoassimilados para crescimento de espiguetas e grãos. O objetivo deste estudo foi determinar o Estágio de Haun (EH no colmo principal e o número de folhas que ainda faltam emergir até o aparecimento da folha bandeira por ocasião da DP em vários genótipos de arroz cultivado e biótipos de arroz vermelho, em diferentes datas de semeadura. Um experimento de

  20. Repelência e deterrência na oviposição de Bemisia tabaci biótipo B pelo uso de extratos vegetais em Cucurbita pepo L Repellence and deterrence on oviposition of Bemisia tabaci biotype B by the use of vegetal extracts in Cucurbita pepo L

    Directory of Open Access Journals (Sweden)

    J.P.G.F. Silva

    2012-01-01

    Full Text Available Bemisia tabaci biótipo B é um dos principais insetos-praga na cultura da abobrinha (Cucurbita pepo L.. O manejo dessa mosca-branca tornou-se grande desafio aos agricultores, uma vez que esta apresenta rápida capacidade de desenvolver resistência a diferentes classes de inseticidas. Como alternativa vem sendo investigado o uso de extratos vegetais com atividades inseticida e/ou insetistática, os quais têm revelado resultados promissores no combate a inseto. O presente trabalho teve por objetivo avaliar os possíveis efeitos de sete extratos provenientes de cinco espécies vegetais, Ruta graveolens L. (folhas, Azadirachta indica A. Juss. (folhas + ramos, Trichilia pallida Swartz (ramos, T. pallida (folhas, A. indica (amêndoas, Chenopodium ambrosioides L. (inflorescências + ramos+ folhas e Mentha pulegium L. (folhas, sobre Bemisia tabaci biótipo B em abobrinha, por meio de testes de repelência e deterrência para oviposição. Em teste com chance de escolha, avaliou-se a atratividade e determinou-se o índice de repelência após 6, 24 e 48 horas da aplicação dos extratos. A oviposição foi verificada após a terceira contagem do número de adultos. O extrato à base de folhas de M. pulegium mostrou repelência e deterrência à oviposição de B. tabaci biótipo B, podendo ser recomendado como alternativa para o manejo do inseto.Bemisia tabaci biotype B is one of the main pests in squash (Cucurbita pepo L.. The management of this whitefly has become a major challenge to growers, since they have the ability to quickly develop resistance to different classes of insecticides. Alternatively, the use of plant extracts with insecticide and/or insectistatic activities has been investigated, showing promising results for the whitefly control. The present study evaluated the possible effects of seven extracts from five plant species, Ruta graveolens L. (leaves, Azadirachta indica A. Juss. (leaves + branches, Trichilia pallida Swartz (branches

  1. μ-Theraphotoxin-An1a

    DEFF Research Database (Denmark)

    Rates, Breno; Prates, Maura V; Verano-Braga, Thiago;

    2013-01-01

    Tarantulas are included in the mygalomorph spider family Theraphosidae. Although the pharmacological diversity of theraphosid toxins (theraphotoxins) is broad, studies dedicated to the characterization of biologically active molecules from the theraphosid genus Acanthoscurria have been restricted...... to the investigation of antimicrobial peptides and polyamines produced by the hemocytes of Acanthoscurria gomesiana. The present study reports the purification, primary structure determination and electrophysiological effects of an anti-insect toxin, named μ-theraphotoxin-An1a (μ-TRTX-An1a), from the venom...

  2. SN1a Supernova Red Shifts

    OpenAIRE

    Collins, R. L.

    2001-01-01

    Recent SN1a data have probed deeper into space than ever before. Plotted as distance vs. recession speed, a disturbing non-linearity is found which has led to speculations about "dark energy" which somehow acts like anti-gravity. This study finds a full explanation in relativity theory. The metric of space shrinks, in the presence of a gravitational potential, V, by exp(V/c^2). Early in the big bang, when the SN1a's sent their signals, V was larger than now. By fitting the data to a relativis...

  3. Isolation of rat adrenocortical mitochondria

    International Nuclear Information System (INIS)

    Highlights: ► A method for isolation of adrenocortical mitochondria from the adrenal gland of rats is described. ► The purified isolated mitochondria show excellent morphological integrity. ► The properties of oxidative phosphorylation are excellent. ► The method increases the opportunity of direct analysis of adrenal mitochondria from small animals. -- Abstract: This report describes a relatively simple and reliable method for isolating adrenocortical mitochondria from rats in good, reasonably pure yield. These organelles, which heretofore have been unobtainable in isolated form from small laboratory animals, are now readily accessible. A high degree of mitochondrial purity is shown by the electron micrographs, as well as the structural integrity of each mitochondrion. That these organelles have retained their functional integrity is shown by their high respiratory control ratios. In general, the biochemical performance of these adrenal cortical mitochondria closely mirrors that of typical hepatic or cardiac mitochondria.

  4. Isolation of methylglyoxal from liver.

    Science.gov (United States)

    Fodor, G; Mujumdar, R; Szent-Gyorgyi, A

    1978-01-01

    Acetaldehyde and methylglyoxal were shown to be present in liver bound to protein. They were isolated in the form of 2,4-dinitrophenylhydrazones and osazones, respectively. The NMR spectrum of pure methylglyoxal was recorded. PMID:279916

  5. Isolation of rat adrenocortical mitochondria

    Energy Technology Data Exchange (ETDEWEB)

    Solinas, Paola [Department of Pharmacology, School of Medicine, Case Western Reserve University, Cleveland, OH 44106 (United States); Department of Medicine, Center for Mitochondrial Disease, School of Medicine, Case Western Reserve University, Cleveland, OH 44106 (United States); Fujioka, Hisashi [Electron Microscopy Facility, Department of Pharmacology, Center for Mitochondrial Disease, School of Medicine, Case Western Reserve University, Cleveland, OH 44106 (United States); Tandler, Bernard [Department of Biological Sciences, School of Dental Medicine, Center for Mitochondrial Disease, School of Medicine, Case Western Reserve University, Cleveland, OH 44106 (United States); Hoppel, Charles L., E-mail: charles.hoppel@case.edu [Department of Pharmacology, School of Medicine, Case Western Reserve University, Cleveland, OH 44106 (United States); Department of Medicine, Center for Mitochondrial Disease, School of Medicine, Case Western Reserve University, Cleveland, OH 44106 (United States)

    2012-10-12

    Highlights: Black-Right-Pointing-Pointer A method for isolation of adrenocortical mitochondria from the adrenal gland of rats is described. Black-Right-Pointing-Pointer The purified isolated mitochondria show excellent morphological integrity. Black-Right-Pointing-Pointer The properties of oxidative phosphorylation are excellent. Black-Right-Pointing-Pointer The method increases the opportunity of direct analysis of adrenal mitochondria from small animals. -- Abstract: This report describes a relatively simple and reliable method for isolating adrenocortical mitochondria from rats in good, reasonably pure yield. These organelles, which heretofore have been unobtainable in isolated form from small laboratory animals, are now readily accessible. A high degree of mitochondrial purity is shown by the electron micrographs, as well as the structural integrity of each mitochondrion. That these organelles have retained their functional integrity is shown by their high respiratory control ratios. In general, the biochemical performance of these adrenal cortical mitochondria closely mirrors that of typical hepatic or cardiac mitochondria.

  6. Isolated tubercles of some Palaeoscolecida

    NARCIS (Netherlands)

    Boogaard, van den M.

    1989-01-01

    Tubercles of Palaeoscolex? tenensis Kraft & Mergl, 1989 found as isolated phosphatic microfossils in Ordovician limestones are described. The probability that the phosphatic microfossils assigned to the genera Hadimopanella Gedik, 1977 and Milaculum Müller, 1973 represent tubercles of palaeoscolecid

  7. Missed isolated posterior malleolar fractures

    OpenAIRE

    Ozler, Turhan; Guven, Melih; Onal, Ayberk; Ulucay, Cagatay; Beyzadeoglu, Tahsin; Altintas, Faik

    2014-01-01

    Objective:The aim of this study was to evaluate the injury mechanism and clinical and radiological results of the patients with isolated posterior malleolar fracture.Methods: Seven patients (5 male, 2 female; mean age: 32 years; range: 23-40) with a missed isolated posterior malleolar fracture were included in the study. All patients had initially been examined for an ankle sprain in the emergency room, where the initial plain radiographs did not show any abnormality. Due to the long lasting ...

  8. Pneumothorax complicating isolated clavicle fracture.

    Science.gov (United States)

    Hani, Redouane; Ennaciri, Badr; Jeddi, Idriss; El Bardouni, Ahmed; Mahfoud, Mustapha; Berrada, Mohamed Saleh

    2015-01-01

    Isolated clavicle fractures are among the commonest of traumatic fractures in the emergency department. Complications of isolated clavicle fractures are rare. Pneumothorax has been described as a complication of a fractured clavicle only rarely in English literature. In all the reported cases, the pneumothorax was treated by a thoracostomy and the clavicle fracture was treated conservatively. In our case, the pneumothorax required a chest drain insertion and the clavicle fracture was treated surgically with good result.

  9. Base isolation of fluid containers

    Energy Technology Data Exchange (ETDEWEB)

    Kim, S. [Cygna Group Inc./ICF Kaiser International, Oakland, CA (United States)

    1995-12-01

    Fluid containers often constitute critical internal equipment in power plants. However, due to possible structure-equipment interaction effect they are particularly vulnerable during strong earthquake events. An effective technique for protecting fluid containers is base isolation. By deflecting the possible seismic input energy into the superstructure, base isolation can substantially reduce seismic demand on the containers, making it more cost effective than equivalent conventional design.

  10. Base isolation of fluid containers

    International Nuclear Information System (INIS)

    Fluid containers often constitute critical internal equipment in power plants. However, due to possible structure-equipment interaction effect they are particularly vulnerable during strong earthquake events. An effective technique for protecting fluid containers is base isolation. By deflecting the possible seismic input energy into the superstructure, base isolation can substantially reduce seismic demand on the containers, making it more cost effective than equivalent conventional design

  11. 2006 Johnston Site 1A-P

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — Underwater Site 1A-P was established at Johnston Atoll by Dr. James Maragos, U.S. Fish & Wildlife Service, on June 29, 2000. With a start point (meter 0) at...

  12. 2000 Johnston Site 1A-P

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — Underwater Site 1A-P was established at Johnston Atoll by Dr. James Maragos, U.S. Fish & Wildlife Service, on June 29, 2000. With a start point (meter 0) at...

  13. Geomorphology of Minnesota - Isolated Landform Structures

    Data.gov (United States)

    Minnesota Department of Natural Resources — Geomorphology of Minnesota - Isolated Landform Structures are essentially cartographic arcs representing isolated glacial features that were mapped in conjunction...

  14. Efficient cell culture system for hepatitis C virus genotype 1a and 1b

    DEFF Research Database (Denmark)

    2013-01-01

    reference strain J4. Sequence analysis of recovered 1a/2a and 1b/2a recombinants from 2 serial passages and subsequent reverse genetic studies revealed adaptive mutations in e.g. p7, NS2 and/or NS3. In addition, the inventors demonstrate the possibility of using adaptive mutations identified for one HCV...... isolate in generating efficient cell culture systems for other isolates by transfer of mutations across isolates, subtypes or major genotypes. Furthermore neutralization studies showed that viruses of e.g. genotype 1 were efficiently neutralized by genotype Ia, 4a and 5a serum, an effect that could be...... utilized e.g. in vaccine development and immunological prophylaxis. The inventors in addition demonstrate the use of the developed systems for screening of antiviral substances in vitro and functional studies of the virus, e.g. identification of receptors required for HCV entry...

  15. Isolation and identification of local Bacillus isolates for xylanase biosynthesis.

    Directory of Open Access Journals (Sweden)

    Hassan Ammoneh

    2014-04-01

    Full Text Available Bacillus species are attractive industrial organisms due to their rapid growth rates leading to a short fermentation cycle and for their capacity to secrete important enzymes and proteins such as xylanase into the extracellular medium. Considering the industrial importance of xylanase, in this current study, Bacillus spp. were isolated from different soils and were screened for their xylanase production.Bacillus isolates used in this study were obtained from a national screening program carried out during 2006-2007 in which soil samples that covered areas throughout the interior of Syria were collected. The prepared inoculum from each of Bacillus isolates was aliquoted onto xylan agar plates, incubated at 30°C for 72 h and screened for xylanase synthesis.Xylanolytic isolates were selected depending on the clear zones of xylan hydrolysis. Fifteen isolates having the highest clearing zone were determined and grown in a solid state fermentation. Of the 15 isolates, three bacilli namely SY30A, SY185C and SY190E that showed maximum xylanase production, were identified using the 16S rDNA sequencing method. According to 16S rDNA gene sequence data, the closest phylogenetic neighbor for SY30A was Bacillus pumilus and for SY185C and SY190E isolates was Bacillus subtilis. Optimal pH and temperature for xylanase activity was 7.0 and 55ºC for SY30A and 6.0 and 60ºC for SY185C and SY190E, respectively. Under these conditions, the following activities were found to be around 1157 ± 58, 916 ± 46 and 794 ± 39 (U/g for SY30A, SY185C and SY190E, respectivly.Selected local Bacillus isolates were found to be a potential source of xylanase which was proven to be quite suitable for multiple biotechnological applications. These isolates might after extensive optimization steps be an alternative to commercially available strains.

  16. Catalogues of isolated galaxies, isolated pairs, and isolated triplets in the local Universe

    Science.gov (United States)

    Argudo-Fernández, M.; Verley, S.; Bergond, G.; Duarte Puertas, S.; Ramos Carmona, E.; Sabater, J.; Fernández Lorenzo, M.; Espada, D.; Sulentic, J.; Ruiz, J. E.; Leon, S.

    2015-06-01

    Context. The construction of catalogues of galaxies and the a posteriori study of galaxy properties in relation to their environment have been hampered by scarce redshift information. The new 3-dimensional (3D) surveys permit small, faint, physically bound satellites to be distinguished from a background-projected galaxy population, giving a more comprehensive 3D picture of the surroundings. Aims: We aim to provide representative samples of isolated galaxies, isolated pairs, and isolated triplets for testing galaxy evolution and secular processes in low density regions of the local Universe, as well as to characterise their local and large-scale environments. Methods: We used spectroscopic data from the tenth data release of the Sloan Digital Sky Survey (SDSS-DR10) to automatically and homogeneously compile catalogues of 3702 isolated galaxies, 1240 isolated pairs, and 315 isolated triplets in the local Universe (z ≤ 0.080). To quantify the effects of their local and large-scale environments, we computed the projected density and the tidal strength for the brightest galaxy in each sample. Results: We find evidence of isolated pairs and isolated triplets that are physically bound at projected separations up to d ≤ 450 kpc with radial velocity difference Δν ≤ 160 km s-1, where the effect of the companion typically accounts for more than 98% of the total tidal strength affecting the central galaxy. For galaxies in the catalogues, we provide their positions, redshifts, and degrees of relation with their physical and large-scale environments. The catalogues are publicly available to the scientific community. Conclusions: For isolated galaxies, isolated pairs, and isolated triplets, there is no difference in their degree of interaction with the large-scale structure (up to 5 Mpc), which may suggest that they have a common origin in their formation and evolution. We find that most of them belong to the outer parts of filaments, walls, and clusters, and generally

  17. Yilmaz Theory of SNe 1a Redshift

    OpenAIRE

    Robertson, Stanley L.

    2015-01-01

    A redshift-luminosity distance relation in excellent agreement with observations is calculated here for SNe 1a using the Yilmaz gravitational theory. In contrast to the current conventional explanation based on general relativity, the Yilmaz theory does not require a cosmological constant term that implies the existence of "dark energy". The Yilmaz theory requires only one parameter; a mean mass-energy density of the cosmos. The required value is essentially the same as the critical density f...

  18. Uso da água por plantas de arroz em competição com biótipos de Echinochloa crusgalli resistente e suscetível ao herbicida quinclorac Water use by rice plants under competition with Echinochloa crusgalli biotypes resistant and susceptible to quinclorac

    Directory of Open Access Journals (Sweden)

    G. Concenço

    2009-06-01

    de arroz quando em interação com outros fatores.The objective of this work was to evaluate the characteristics related to water use efficiency of rice plants, under competition with different densities of Echinochloa crusgalli plants. The trial was installed under greenhouse conditions, in a completely randomized block design, and factorial scheme 2 x 6 (two biotypes and six infestation densities, with four replications. The treatments consisted of one rice plant at the center of the plot, under competition with 0, 1, 2, 3, 4 or 5 plants of Echinochloa crusgalli, resistant or susceptible to quinclorac, at the periphery of the plot. Fifty days after emergence, water vapor stomatal conductance, sub-stomatal water pressure, leaf temperature and transpiration rate were evaluated, as well as water use efficiency. The plants were cut at the soil level and put into paper bags and dried at 70 ± 1 ºC until dry mass stabilization. Data were analyzed by the F-test and, in case of significance, submitted to the DMRT test to evaluate the effect of increasing competition with Echinochloa over the rice plants, and to DMS test to compare the rice plants submitted to the biotypes at each competition level. Rice plants were more affected as the barnyardgrass density increased, but differences related to the biotype were not observed. Important variables, such as water use efficiency, were more affected when rice plants were under competition with plants of the susceptible biotype. Under field conditions, this characteristic may not be relevant to rice plant development, when interacted with other factors.

  19. MALDI Biotyper与API20E对克罗诺杆菌(阪崎肠杆菌)的鉴定结果比较%Comparison of MALDI-TOF MS biotyper with the phenotyping methods API20E for identification of Cronobacter spp.

    Institute of Scientific and Technical Information of China (English)

    赵贵明; 杨海荣; 赵勇胜; 袁飞; 陈颖

    2010-01-01

    目的:评价MALDI-TOF MS Biotyper鉴定克罗诺杆菌的效果.方法:应用MALDI-TOF MS Biotyper与API20E分别对32株克罗诺杆菌(28株分离株,4株参考菌株)与相近菌株阴沟肠杆菌、产气肠杆菌进行鉴定,并对鉴定结果分析比较.结果:MALDI-TOF MS Biotyper2.0将32株克罗诺杆菌鉴定到种、属水平分别为56.2%和37.5%;API20E为75%、21.9%.3株菌未获得鉴定结果,其余29株菌的鉴定结果相符.结论:MALDI-TOF MS Biotyper作为一种新的细菌鉴定手段,可用于克罗诺杆菌的鉴定.

  20. Structure of adducts of isoindolo[2,1-a]benzimidazole derivatives with maleimides

    Science.gov (United States)

    Korolev, Oleksandr; Yegorova, Tatyana; Levkov, Igor; Malytskyy, Volodymyr; Shishkin, Oleg; Zubatyuk, Roman; Palamarchuk, Genadiy; Vedrenne, Marc; Baltas, Michel; Voitenko, Zoia

    2015-03-01

    The selectivity of formation and some mechanistic insights during the synthesis of substituted isoindolo[2,1-a]benzimidazoles are discussed. Furthermore, the reactions of the obtained products with maleimides were carried out. Two types rearrangement adducts together with intermediate Michael type adducts were isolated. The influence of the reaction conditions and reagents ratio is discussed. Specific spectral criteria for the identification of the Michael type adducts are indicated.