Effect of environmental quality and mesohabitat structure on a Biotic Integrity Index based on fish assemblages of cerrado streams from Rio Cuiabá basin, Brazil

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NG Machado

Full Text Available Over the last 30 years, the Cerrado has been experiencing various antropic impacts that have brought about alterations to species composition, structure and functioning of aquatic habitats. Therefore, studies on negative impacts are useful to prevent future damage and restore environmental quality. The objectives of our study were: i to adapt an index of biotic integrity of streams in the Rio Cuiabá Basin and ii to analyze if the Index of Biotic Integrity (IBI correlated with the environmental quality measured by the Index of Environmental Quality (IEQ and with the mesohabitat structure. We sampled 26 streams in sub-basins of the Cuiabá River. In each stream, we closed a stretch of 50 m with blockage nets and used electrofishing to capture fish. To obtain a measure of environmental quality in sampled units, we characterized the stream and its micro basin. For the analyses, we used the Spearman Correlation, Kruskal-Wallis test and Analysis of Multiple Regression. We collected 697 individuals distributed into 6 orders, 15 families and 49 species. The IBI followed changes on environmental quality measured by IEQ when we removed streams that present natural barriers from the analysis (r² = 0.4; r² = 0.58. Types of land use did not affect the biotic integrity (n = 26; df = 4; H = 4,860; p = 0.302, but natural and artificial barriers affected it (n = 26; df = 4; H = 11,027; p = 0.026. The IBI was not sensitive to variations in mesohabitat structure (F2,23 = 0.373; r² = 0.031; Axe 1 p = 0.620; Axe 2 p = 0.490. The IBI is certainly a reasonable instrument for evaluating changes in the environment, but we cannot ignore the fact that we were able to obtain the same result with any combinations of metrics. This makes its analysis and interpretation difficult.

Biotic interactions overrule plant responses to climate, depending on the species' biogeography.

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Astrid Welk

Full Text Available This study presents an experimental approach to assess the relative importance of climatic and biotic factors as determinants of species' geographical distributions. We asked to what extent responses of grassland plant species to biotic interactions vary with climate, and to what degree this variation depends on the species' biogeography. Using a gradient from oceanic to continental climate represented by nine common garden transplant sites in Germany, we experimentally tested whether congeneric grassland species of different geographic distribution (oceanic vs. continental plant range type responded differently to combinations of climate, competition and mollusc herbivory. We found the relative importance of biotic interactions and climate to vary between the different components of plant performance. While survival and plant height increased with precipitation, temperature had no effect on plant performance. Additionally, species with continental plant range type increased their growth in more benign climatic conditions, while those with oceanic range type were largely unable to take a similar advantage of better climatic conditions. Competition generally caused strong reductions of aboveground biomass and growth. In contrast, herbivory had minor effects on survival and growth. Against expectation, these negative effects of competition and herbivory were not mitigated under more stressful continental climate conditions. In conclusion we suggest variation in relative importance of climate and biotic interactions on broader scales, mediated via species-specific sensitivities and factor-specific response patterns. Our results have important implications for species distribution models, as they emphasize the large-scale impact of biotic interactions on plant distribution patterns and the necessity to take plant range types into account.

The role of biotic interactions in shaping distributions and realised assemblages of species: implications for species distribution modelling.

Science.gov (United States)

Wisz, Mary Susanne; Pottier, Julien; Kissling, W Daniel; Pellissier, Loïc; Lenoir, Jonathan; Damgaard, Christian F; Dormann, Carsten F; Forchhammer, Mads C; Grytnes, John-Arvid; Guisan, Antoine; Heikkinen, Risto K; Høye, Toke T; Kühn, Ingolf; Luoto, Miska; Maiorano, Luigi; Nilsson, Marie-Charlotte; Normand, Signe; Öckinger, Erik; Schmidt, Niels M; Termansen, Mette; Timmermann, Allan; Wardle, David A; Aastrup, Peter; Svenning, Jens-Christian

2013-02-01

Predicting which species will occur together in the future, and where, remains one of the greatest challenges in ecology, and requires a sound understanding of how the abiotic and biotic environments interact with dispersal processes and history across scales. Biotic interactions and their dynamics influence species' relationships to climate, and this also has important implications for predicting future distributions of species. It is already well accepted that biotic interactions shape species' spatial distributions at local spatial extents, but the role of these interactions beyond local extents (e.g. 10 km(2) to global extents) are usually dismissed as unimportant. In this review we consolidate evidence for how biotic interactions shape species distributions beyond local extents and review methods for integrating biotic interactions into species distribution modelling tools. Drawing upon evidence from contemporary and palaeoecological studies of individual species ranges, functional groups, and species richness patterns, we show that biotic interactions have clearly left their mark on species distributions and realised assemblages of species across all spatial extents. We demonstrate this with examples from within and across trophic groups. A range of species distribution modelling tools is available to quantify species environmental relationships and predict species occurrence, such as: (i) integrating pairwise dependencies, (ii) using integrative predictors, and (iii) hybridising species distribution models (SDMs) with dynamic models. These methods have typically only been applied to interacting pairs of species at a single time, require a priori ecological knowledge about which species interact, and due to data paucity must assume that biotic interactions are constant in space and time. To better inform the future development of these models across spatial scales, we call for accelerated collection of spatially and temporally explicit species data. Ideally

A literature review on biotic homogenization

OpenAIRE

Guangmei Wang; Jingcheng Yang; Chuangdao Jiang; Hongtao Zhao; Zhidong Zhang

2009-01-01

Biotic homogenization is the process whereby the genetic, taxonomic and functional similarity of two or more biotas increases over time. As a new research agenda for conservation biogeography, biotic homogenization has become a rapidly emerging topic of interest in ecology and evolution over the past decade. However, research on this topic is rare in China. Herein, we introduce the development of the concept of biotic homogenization, and then discuss methods to quantify its three components (...

Expected Future Conditions for Secure Power Operation with Large Scale of RES Integration

International Nuclear Information System (INIS)

Majstrovic, G.; Majstrovic, M.; Sutlovic, E.

2015-01-01

EU energy strategy is strongly focused on the large scale integration of renewable energy sources. The most dominant part here is taken by variable sources - wind power plants. Grid integration of intermittent sources along with keeping the system stable and secure is one of the biggest challenges for the TSOs. This part is often neglected by the energy policy makers, so this paper deals with expected future conditions for secure power system operation with large scale wind integration. It gives an overview of expected wind integration development in EU, as well as expected P/f regulation and control needs. The paper is concluded with several recommendations. (author).

Environmental clustering of lakes to evaluate performance of a macrophyte index of biotic integrity

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Vondracek, Bruce C.; Vondracek, Bruce; Hatch, Lorin K.

2013-01-01

Proper classification of sites is critical for the use of biological indices that can distinguish between natural and human-induced variation in biological response. The macrophyte-based index of biotic integrity was developed to assess the condition of Minnesota lakes in relation to anthropogenic stressors, but macrophyte community composition varies naturally across the state. The goal of the study was to identify environmental characteristics that naturally influence macrophyte index response and establish a preliminary lake classification scheme for biological assessment (bioassessment). Using a comprehensive set of environmental variables, we identified similar groups of lakes by clustering using flexible beta classification. Variance partitioning analysis of IBI response indicated that evaluating similar lake clusters could improve the ability of the macrophyte index to identify community change to anthropogenic stressors, although lake groups did not fully account for the natural variation in macrophyte composition. Diagnostic capabilities of the index could be improved when evaluating lakes with similar environmental characteristics, suggesting the index has potential for accurate bioassessment provided comparable groups of lakes are evaluated.

Development of a Macroinvertebrate - based Index of Biotic Integrity (M-IBI for Colombo-Sri Jayawardhanapura Canal System (A new approach to assess stream/ wetland health

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N. Nilakarawasam

2012-05-01

Full Text Available Macroinvertebrates have been identified as excellent indicators of stream (wetland health as they respond rapidly to environmental changers and provide short to medium term pollution history records. Current study was aimed to develop a Macroinvertebrate-based Index of Biotic Integrity (M-IBI to monitor stream health of Colombo-Sri Jayawardhanapura canal system. Macroinvertebrates were sampled using a D-framed kick net from ten stations during the period of Nov 2008 to June 2009. Habitat characteristics and some water quality parameters also recorded. For the index development, those ten stations were grouped into two as ’Reference’ and ‘Degraded’ based on their habitat characteristics and some water quality parameters. Then 41vcandidate metrics were nominated for statistical analysis process. After considering their sensitivity to stream impairment, ability of showing exceptionally strong discrimination between reference and degraded sites and less redundancy, ten candidate metrics were selected for M-IBI development. Validity of the index was tested with a new independent data set. Scores acquired for these data set were positively correlated with DO values (r = 0.578. That concluded the potential of using M-IBI developed for biological monitoring and improving biotic integrity of streams and wetlands.

Time Varying Market Integration and Expected Rteurns in Emerging Markets

NARCIS (Netherlands)

de Jong, F.C.J.M.; de Roon, F.A.

2001-01-01

We use a simple model in which the expected returns in emerging markets depend on their systematic risk as measured by their beta relative to the world portfolio as well as on the level of integration in that market.The level of integration is a time-varying variable that depends on the market value

Biotic elements of NPP techno-ecosystem

International Nuclear Information System (INIS)

Protasov, A.A.; Silaeva, A.A.

2013-01-01

Specific features of biotic elements in the NPP techno-ecosystems were considered and compared with natural ecosystems. Relationships between biotic communities and environmental factors that are specific to the techno-ecosystems were discussed, and the problems of limitation of biological hindrances in operation of equipment, principles of hydrobiological and environmental monitoring were considered.

Developing a Phytoplankton Biotic Index as an Indicator of Freshwater Inflow within a Subtropical Estuary

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Steichen, J. L.; Quigg, A.; Lucchese, A.; Preischel, H.

2016-02-01

Freshwater inflows drive the water and sediment quality in coastal bays and estuaries influencing the ecosystem and health of the biological community. Phytoplankton accessory pigments (used as a proxy for major taxonomic groups) have been utilized to develop a biotic index of physical, chemical and biotic disturbances in Chesapeake Bay (USA) and other estuarine systems. In this study we have used the Chesapeake Bay - Phytoplankton Index of Biotic Integrity model as a guide in developing an index for Galveston Bay, TX (USA) as an indicator of sufficient freshwater inflow to a subtropical estuary. Multivariate statistical analyses were run using PRIMER-E+PERMANOVA to determine the correlations between phytoplankton accessory pigment concentrations and a suite of abiotic factors associated with freshwater inflow (salinity, DIN, PO4, secchi). Phytoplankton pigment concentrations and water quality parameters were collected across Galveston Bay on a monthly basis from 2008-2013. In the upper region of the bay nearest the river source Dinophyceae, Cryptophyceae (winter (Dec-Feb)) and Chlorophyceae (winter and spring (Mar-May)) were significantly correlated to freshwater inflow and nutrient concentrations PO4 (p<0.05). Increased concentrations of Bacillariophyceae and Cyanophyceae (summer (Jun-Aug)) were significantly correlated to lower concentrations of DIN (p<0.05). Near the mouth of the estuary there was a significant correlation between the increase in Bacillariophyceae, Cyanophyceae, Cryptophyceae and Dinophyceae with decreasing PO4 (p<0.05). Within the dynamic system of Galveston Bay we are working to apply a Phytoplankton Index of Biotic Integrity as a means of monitoring the biological health of this ecologically and economically important estuarine ecosystem.

High performance bio-integrated devices

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Kim, Dae-Hyeong; Lee, Jongha; Park, Minjoon

2014-06-01

In recent years, personalized electronics for medical applications, particularly, have attracted much attention with the rise of smartphones because the coupling of such devices and smartphones enables the continuous health-monitoring in patients' daily life. Especially, it is expected that the high performance biomedical electronics integrated with the human body can open new opportunities in the ubiquitous healthcare. However, the mechanical and geometrical constraints inherent in all standard forms of high performance rigid wafer-based electronics raise unique integration challenges with biotic entities. Here, we describe materials and design constructs for high performance skin-mountable bio-integrated electronic devices, which incorporate arrays of single crystalline inorganic nanomembranes. The resulting electronic devices include flexible and stretchable electrophysiology electrodes and sensors coupled with active electronic components. These advances in bio-integrated systems create new directions in the personalized health monitoring and/or human-machine interfaces.

Coevolutionary aesthetics in human and biotic artworlds.

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Prum, Richard O

2013-01-01

This work proposes a coevolutionary theory of aesthetics that encompasses both biotic and human arts. Anthropocentric perspectives in aesthetics prevent the recognition of the ontological complexity of the aesthetics of nature, and the aesthetic agency of many non-human organisms. The process of evaluative coevolution is shared by all biotic advertisements. I propose that art consists of a form of communication that coevolves with its own evaluation. Art and art history are population phenomena. I expand Arthur Danto's Artworld concept to any aesthetic population of producers and evaluators. Current concepts of art cannot exclusively circumscribe the human arts from many forms of non-human biotic art. Without assuming an arbitrarily anthropocentric perspective, any concept of art will need to engage with biodiversity, and either recognize many instances of biotic advertisements as art, or exclude some instances of human art. Coevolutionary aesthetic theory provides a heuristic account of aesthetic change in both human and biotic artworlds, including the coevolutionary origin of aesthetic properties and aesthetic value within artworlds. Restructuring aesthetics, art criticism, and art history without human beings at the organizing centers of these disciplines stimulate new progress in our understanding of art, and the unique human contributions to aesthetics and aesthetic diversity.

THE INFLUENCE OF BIOTIC FACTORS ON THE AESTHETIC, FUNCTIONAL AND ECONOMIC ISSUES OF GREEN SPACES IN PITESTI

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Mihaela Ileana Oprea

2017-07-01

Full Text Available This case study aims to highlight the influence of some direct biotic factors (dogs, man, birds on the integrity of green spaces in the Pitesti city centre during three consecutive years: 2014, 2015 and 2016. Observations on the appearance of the affected areas were carried out, as well as determinations on: the number of destroyed/stolen floral plants (units and the degraded/destroyed area of green space (sqm, by the biotic factors studied. The total percentage of losses was determined and the costs generated by the restoration of affected areas were assessed.

Biotic interactions in the face of climate change: a comparison of three modelling approaches.

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Anja Jaeschke

Full Text Available Climate change is expected to alter biotic interactions, and may lead to temporal and spatial mismatches of interacting species. Although the importance of interactions for climate change risk assessments is increasingly acknowledged in observational and experimental studies, biotic interactions are still rarely incorporated in species distribution models. We assessed the potential impacts of climate change on the obligate interaction between Aeshna viridis and its egg-laying plant Stratiotes aloides in Europe, based on an ensemble modelling technique. We compared three different approaches for incorporating biotic interactions in distribution models: (1 We separately modelled each species based on climatic information, and intersected the future range overlap ('overlap approach'. (2 We modelled the potential future distribution of A. viridis with the projected occurrence probability of S. aloides as further predictor in addition to climate ('explanatory variable approach'. (3 We calibrated the model of A. viridis in the current range of S. aloides and multiplied the future occurrence probabilities of both species ('reference area approach'. Subsequently, all approaches were compared to a single species model of A. viridis without interactions. All approaches projected a range expansion for A. viridis. Model performance on test data and amount of range gain differed depending on the biotic interaction approach. All interaction approaches yielded lower range gains (up to 667% lower than the model without interaction. Regarding the contribution of algorithm and approach to the overall uncertainty, the main part of explained variation stems from the modelling algorithm, and only a small part is attributed to the modelling approach. The comparison of the no-interaction model with the three interaction approaches emphasizes the importance of including obligate biotic interactions in projective species distribution modelling. We recommend the use of

Time-Varying Market Integration and Expected Returns in Emerging Markets

OpenAIRE

de Jong, Frank; de Roon, Frans

2001-01-01

We use a simple model in which the expected returns in emerging markets depend on their systematic risk as measured by their beta relative to the world portfolio as well as on the level of integration in that market. The level of integration is a time-varying variable that depends on the market value of the assets that can be held by domestic investors only versus the market value of the assets that can be traded freely. Our empirical analysis for 30 emerging markets shows that there are stro...

Time Varying Market Integration and Expected Rteurns in Emerging Markets

OpenAIRE

Jong, F.C.J.M. de; Roon, F.A. de

2001-01-01

We use a simple model in which the expected returns in emerging markets depend on their systematic risk as measured by their beta relative to the world portfolio as well as on the level of integration in that market.The level of integration is a time-varying variable that depends on the market value of the assets that can be held by domestic investors only versus the market value of the assets that can be traded freely.Our empirical analysis for 30 emerging markets shows that there are strong...

Time-varying market integration and expected returns in emerging mrkets

NARCIS (Netherlands)

de Jong, F.C.J.M.; de Roon, F.

2001-01-01

We use a simple model in which the expected returns in emerging markets depend on their systematicrisk as measured by their beta relative to the world portfolio as well as on the level ofintegration in that market. The level of integration is a time-varying variable that depends on themarket value

The interactions of ants with their biotic environment.

Science.gov (United States)

Chomicki, Guillaume; Renner, Susanne S

2017-03-15

This s pecial feature results from the symposium 'Ants 2016: ant interactions with their biotic environments' held in Munich in May 2016 and deals with the interactions between ants and other insects, plants, microbes and fungi, studied at micro- and macroevolutionary levels with a wide range of approaches, from field ecology to next-generation sequencing, chemical ecology and molecular genetics. In this paper, we review key aspects of these biotic interactions to provide background information for the papers of this s pecial feature After listing the major types of biotic interactions that ants engage in, we present a brief overview of ant/ant communication, ant/plant interactions, ant/fungus symbioses, and recent insights about ants and their endosymbionts. Using a large molecular clock-dated Formicidae phylogeny, we map the evolutionary origins of different ant clades' interactions with plants, fungi and hemiptera. Ants' biotic interactions provide ideal systems to address fundamental ecological and evolutionary questions about mutualism, coevolution, adaptation and animal communication. © 2017 The Author(s).

An Index of Biotic Integrity for shallow streams of the Hondo River basin, Yucatan Peninsula

Energy Technology Data Exchange (ETDEWEB)

Schmitter-Soto, Juan J., E-mail: jschmitt@ecosur.mx; Ruiz-Cauich, Lissie E.; Herrera, Roberto L.; Gonzalez-Solis, David

2011-01-15

An Index of Biotic Integrity (IBI) is proposed, based on the fish communities and populations in streams of the Hondo River basin, Mexico-Belize. Freshwater environments in this area are threatened by exotic fishes, eutrophication, and pesticide pollution, among other problems. This IBI should allow to identify the most vulnerable sites and eventually guide rehabilitation efforts. Data on composition, structure, and function of fish communities were evaluated. Twenty-three sites in the Mexican part of the basin were explored; a stratified sample of 13 sites was used to design the IBI, and the rest were used to test and refine the index. Thirty-four candidate indicator metrics were scanned for their correlation with an index of water and habitat quality (IWHQ), as well as for the possible influence of stream width and altitude or distance to the Hondo River mainstem. Twelve variables were selected to constitute the IBI: relative abundances of Astyanax aeneus, 'Cichlasoma' urophthalmus, Poecilia mexicana, Poecilia sp. (a new species, probably endemic to the upper Hondo River basin), Xiphophorus hellerii, and X. maculatus; relative abundances of bentholimnetic, herbivore, and sensitive species; percentage of native and tolerant species; and Pielou's evenness index. Most of the sites have a low-medium quality and integrity, showing impact due to partial channelization or to suboptimal water quality, reflected in scarcity or absence of sensitive species, frequent excess of tolerant species, occasional presence of exotics, dominance of herbivores (perhaps due to proliferation of filamentous algae), or dominance of the opportunistic species P. mexicana. The streams with better water and habitat quality are those farthest away from the river mainstem, probably because of lower human population and economical production. - Research Highlights: {yields} An Index of Biotic Integrity based on fishes is proposed for streams of the Hondo River basin. {yields

Development and evaluation of the Lake Multi-biotic Integrity Index for Dongting Lake, China

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Xing Wang

2015-06-01

Full Text Available A Lake Multi-biotic Integrity Index (LMII for the China’s second largest interior lake (Dongting Lake was developed to assess the water quality status using algal and macroinvertebrate metrics. Algae and benthic macroinvertebrate assemblages were sampled at 10 sections across 3 subregions of Dongting Lake. We used a stepwise process to evaluate properties of candidate metrics and selected ten for the LMII: Pampean diatom index, diatom quotient, trophic diatom index, relative abundance diatoms, Margalef index of algae, percent sensitive diatoms, % facultative individuals, % Chironomidae individuals, % predators individuals, and total number of macroinvertebrate taxa. We then tested the accuracy and feasibility of the LMII by comparing the correlation with physical-chemical parameters. Evaluation of the LMII showed that it discriminated well between reference and impaired sections and was strongly related to the major chemical and physical stressors (r = 0.766, P<0.001. The re-scored results from the 10 sections showed that the water quality of western Dongting Lake was good, while that of southern Dongting Lake was relatively good and whereas that of eastern Dongting Lake was poor. The discriminatory biocriteria of the LMII are suitable for the assessment of the water quality of Dongting Lake. Additionally, more metrics belonging to habitat, hydrology, physics and chemistry should be considered into the LMII, so as to establish comprehensive assessment system which can reflect the community structure of aquatic organisms, physical and chemical characteristics of water environment, human activities, and so on.

Biotic indices for assessing the status of coastal waters: a review of strengths and weaknesses.

Science.gov (United States)

Martínez-Crego, Begoña; Alcoverro, Teresa; Romero, Javier

2010-05-01

Biotic indices have become key assessment tools in most recent national and trans-national policies aimed at improving the quality of coastal waters and the integrity of their associated ecosystems. In this study we analyzed 90 published biotic indices, classified them into four types, and analyzed the strengths and weaknesses of each type in relation to the requirements of these policies. We identified three main type-specific weaknesses. First, the problems of applicability, due to practical and conceptual difficulties, which affect most indices related to ecosystem function. Second, the failure of many indices based on structural attributes of the community (e.g. taxonomic composition) to link deterioration with causative stressors, or to provide an early-detection capacity. Third, the poor relevance to the ecological integrity of indices based on attributes at the sub-individual level (e.g. multi-biomarkers). Additionally, most indices still fail on two further aspects: the broad-scale applicability and the definition of reference conditions. Nowadays, the most promising approach seems to be the aggregation of indices with complementary strengths, and obtained from different biological communities.

An Index of Biotic Integrity for shallow streams of the Hondo River basin, Yucatan Peninsula.

Science.gov (United States)

Schmitter-Soto, Juan J; Ruiz-Cauich, Lissie E; Herrera, Roberto L; González-Solís, David

2011-01-15

An Index of Biotic Integrity (IBI) is proposed, based on the fish communities and populations in streams of the Hondo River basin, Mexico-Belize. Freshwater environments in this area are threatened by exotic fishes, eutrophication, and pesticide pollution, among other problems. This IBI should allow to identify the most vulnerable sites and eventually guide rehabilitation efforts. Data on composition, structure, and function of fish communities were evaluated. Twenty-three sites in the Mexican part of the basin were explored; a stratified sample of 13 sites was used to design the IBI, and the rest were used to test and refine the index. Thirty-four candidate indicator metrics were scanned for their correlation with an index of water and habitat quality (IWHQ), as well as for the possible influence of stream width and altitude or distance to the Hondo River mainstem. Twelve variables were selected to constitute the IBI: relative abundances of Astyanax aeneus, 'Cichlasoma' urophthalmus, Poecilia mexicana, Poecilia sp. (a new species, probably endemic to the upper Hondo River basin), Xiphophorus hellerii, and X. maculatus; relative abundances of bentholimnetic, herbivore, and sensitive species; percentage of native and tolerant species; and Pielou's evenness index. Most of the sites have a low-medium quality and integrity, showing impact due to partial channelization or to suboptimal water quality, reflected in scarcity or absence of sensitive species, frequent excess of tolerant species, occasional presence of exotics, dominance of herbivores (perhaps due to proliferation of filamentous algae), or dominance of the opportunistic species P. mexicana. The streams with better water and habitat quality are those farthest away from the river mainstem, probably because of lower human population and economical production. Copyright © 2010 Elsevier B.V. All rights reserved.

Biotic soil crusts in relation to topography, cheatgrass, and fire in the Columbia Basin, Washington

Science.gov (United States)

Ponzetti, Jeanne; McCune, B.; Pyke, David A.

2007-01-01

We studied lichen and bryophyte soil crust communities in a large public grazing allotment within a sagebrush steppe ecosystem in which the biotic soil crusts are largely intact. The allotment had been rested from grazing for 12 years, but experienced an extensive series of wildfires. In the 350, 4 ?? 0.5 m plots, stratified by topographic position, we found 60 species or species groups that can be distinguished in the field with a hand lens, averaging 11.5 species groups per plot. Lichen and bryophyte soil crust communities differed among topographic positions. Draws were the most disturbed, apparently from water erosion in a narrow channel and mass wasting from the steepened sides. Presumably because of this disturbance, draws had the lowest average species richness of all the topographic strata we examined. Biotic crust species richness and cover were inversely related to cover of the invasive annual, cheatgrass (Bromus tectorum), and positively related to cover of native bunchgrasses. Integrity of the biotic crust was more strongly related to cheatgrass than to fire. In general, we observed good recovery of crusts following fire, but only in those areas dominated by perennial bunchgrasses. We interpret the resilience of the biotic crust, in this case, to the low abundance of cheatgrass, low amounts of soil disturbance and high moss cover. These fires have not resulted in an explosion of the cheatgrass population, perhaps because of the historically low levels of livestock grazing.

An unified framework to integrate biotic, abiotic processes and human activities in spatially explicit models of agricultural landscapes

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Fabrice eVinatier

2016-02-01

Full Text Available Recent concern over possible ways to sustain ecosystem services has triggered important research worldwide on ecosystem processes at the landscape scale. Understanding this complexity of landscape functioning calls for coupled and spatially-explicit modelling approaches. However, disciplinary boundaries have limited the number of multi-process studies at the landscape scale, and current progress in coupling processes at this scale often reveals strong imbalance between biotic and abiotic processes, depending on the core discipline of the modellers. We propose a spatially-explicit, unified conceptual framework that allows researchers from different fields to develop a shared view of agricultural landscapes. In particular,we distinguish landscape elements that are mobile in space and represent biotic or abiotic objects (for example water, fauna or flora populations, and elements that are immobile and represent fixed landscape elements with a given geometry (for example ditch section or plot. The shared representation of these elements allows setting common objects and spatio-temporal process boundaries that may otherwise differ between disciplines. We present guidelines and an assessment of the applicability of this framework to a virtual landscape system with realistic properties. This framework allows the complex system to be represented with a limited set of concepts but leaves the possibility to include current modelling strategies specific to biotic or abiotic disciplines. Future operational challenges include model design, space and time discretization, and the availability of both landscape modelling platforms and data.

Transcriptomic responses to biotic stresses in Malus x domestica: a meta-analysis study.

Science.gov (United States)

Balan, Bipin; Marra, Francesco Paolo; Caruso, Tiziano; Martinelli, Federico

2018-01-31

RNA-Seq analysis is a strong tool to gain insight into the molecular responses to biotic stresses in plants. The objective of this work is to identify specific and common molecular responses between different transcriptomic data related to fungi, virus and bacteria attacks in Malus x domestica. We analyzed seven transcriptomic datasets in Malus x domestica divided in responses to fungal pathogens, virus (Apple Stem Grooving Virus) and bacteria (Erwinia amylovora). Data were dissected using an integrated approach of pathway- and gene- set enrichment analysis, Mapman visualization tool, gene ontology analysis and inferred protein-protein interaction network. Our meta-analysis revealed that the bacterial infection enhanced specifically genes involved in sugar alcohol metabolism. Brassinosteroids were upregulated by fungal pathogens while ethylene was highly affected by Erwinia amylovora. Gibberellins and jasmonates were strongly repressed by fungal and viral infections. The protein-protein interaction network highlighted the role of WRKYs in responses to the studied pathogens. In summary, our meta-analysis provides a better understanding of the Malus X domestica transcriptome responses to different biotic stress conditions; we anticipate that these insights will assist in the development of genetic resistance and acute therapeutic strategies. This work would be an example for next meta-analysis works aiming at identifying specific common molecular features linked with biotic stress responses in other specialty crops.

A biotic video game smart phone kit for formal and informal biophysics education

Science.gov (United States)

Kim, Honesty; Lee, Seung Ah; Riedel-Kruse, Ingmar

2015-03-01

Novel ways for formal and informal biophysics education are important. We present a low-cost biotic game design kit that incorporates microbial organisms into an interactive gaming experience: A 3D-printable microscope containing four LEDs controlled by a joystick enable human players to provide directional light stimuli to the motile single-celled organism Euglena gracilis. These cellular behaviors are displayed on the integrated smart phone. Real time cell-tracking couples these cells into interactive biotic video game play, i.e., the human player steers Euglena to play soccer with virtual balls and goals. The player's learning curve in mastering this fun game is intrinsically coupled to develop a deeper knowledge about Euglena's cell morphology and the biophysics of its phototactic behavior. This kit is dual educational - via construction and via play - and it provides an engaging theme for a formal biophysics devices class as well as to be presented in informal outreach activities; its low cost and open soft- and hardware should enable wide adoption.

The Gap between Expectations and Reality: Integrating Computers into Mathematics Classrooms

Science.gov (United States)

Guven, Bulent; Cakiroglu, Unal; Akkan, Yasar

2009-01-01

As a result of dramatic changes in mathematics education around the world, in Turkey both elementary and secondary school mathematics curriculums have changed in the light of new demands since 2005. In order to perform the expected change in newly developed curriculum, computer should be integrated into learning and teaching process. Teachers'…

Instruments used in the assessment of expectation toward a spine surgery: an integrative review

Directory of Open Access Journals (Sweden)

Eliane Nepomuceno

Full Text Available Abstract OBJECTIVE To identify and describe the instruments used to assess patients' expectations toward spine surgery. METHOD An integrative review was carried out in the databases PubMed, CINAHL, LILACS and PsycINFO. RESULTS A total of 4,402 publications were identified, of which 25 met the selection criteria. Of the studies selected, only three used tools that had confirmed validity and reliability to be applied; in five studies, clinical scores were used, and were modified for the assessment of patients' expectations, and in 17 studies the researchers developed scales without an adequate description of the method used for their development and validation. CONCLUSION The assessment of patients' expectations has been methodologically conducted in different ways. Until the completion of this integrative review, only two valid and reliable instruments had been used in three of the selected studies.

Regulation of abiotic and biotic stress responses by plant hormones

DEFF Research Database (Denmark)

Grosskinsky, Dominik Kilian; van der Graaff, Eric; Roitsch, Thomas Georg

2016-01-01

Plant hormones (phytohormones) are signal molecules produced within the plant, and occur in very low concentrations. In the present chapter, the current knowledge on the regulation of biotic and biotic stress responses by plant hormones is summarized with special focus on the novel insights...... into the complex hormonal crosstalk of classical growth stimulating plant hormones within the naturally occurring biotic and abiotic multistress environment of higher plants. The MAPK- and phytohormone-cascades which comprise a multitude of single molecules on different signalling levels, as well as interactions...

Carbon trading and carbon taxation: how to consider biotic sources and sinks

International Nuclear Information System (INIS)

Madlener, Reinhard; Schlamadinger, Bernhard

1999-01-01

The Kyoto Protocol (KP) to the UNFCCC includes land-use change and forestry in the carbon accounting process, limited to afforestation, reforestation and deforestation since 1990, and explicitly provides for the option of using a variety of flexibility mechanisms to meet the greenhouse gas (GHG) reduction targets stipulated in a more cost-efficient manner. Domestically, different countries might adopt different approaches to achieve their emission reduction objectives, such as carbon trading or carbon taxation, and it is not clear to date what the implications for bioenergy use, forestry, and land-use change can be expected to be. With respect to national GHG emissions trading, the main issues studied in this paper are: Should trading of fossil fuel emissions allowances be coupled with trading of biotic credits and debits? Should credits for carbon sequestration in forests be auctioned or grandfathered? Should there be a distinction between a carbon permit issued for an additional biotic sink and those issued for fossil fuel carbon emissions? Is there a difference for biotic carbon sinks and sources between one-time permits and permits that allow a continued release of GHG over some pre-specified time? Should permits be issued only for the carbon-stock changes that count under the KP? With respect to national carbon taxation schemes, two questions are investigated: Should a tax credit be given for afforestation/reforestation (and a tax debit for deforestation)? Should tax credits also be given for projects that sequester carbon but do not count under the KP (such as forest protection rather than forest management)? For both schemes a crucial point is that by the formulation chosen in the KP two different classes of forest are created (i.e. those counted and those not counted under the KP), so that the implications for land prices might be significant. From a conceptual point of view this paper addresses the above-mentioned questions and contrasts some of the major

Pro biotic as Alternative to Antibiotic for Broiler Chicken fed Food Industrial Residual Oil

International Nuclear Information System (INIS)

EL-Faramawy, A.A.; El-Maghraby, A.F.; El-Danasoury, M.M.; Hussien, H.A.; Hegazy, E.S.

2016-01-01

This study aimed to evaluate the effect of pro biotic (some lactic acid bacteria) with different levels of food industrial residual oil in broiler commercial diets on growth performance, meat yield, internal organs, economical efficiency and performance index. One hundred and eighty one day old Cobb chicks (45 ± 0.4 g) were equally and randomly divided into 6 groups namely; the antibiotic with fresh oil (FO), the antibiotic with mixed oil (MO) [FO+RO ( 1:1 w/w)], the antibiotic with food industrial residual oil (RO), the pro biotic with FO, the pro biotic with MO and the pro biotic with RO. Virginiamycin, Phibro, USA (15 ppm), was the antibiotic, while a mixture of lactic acid bacteria is chosen as pro biotic. Both were added to the water. During the experiment which lasted for 42 days, the body weight, the feed intake and the mortality rate were recorded at 2, 4 and 6 weeks of age then the body weight gain, feed conversion ratio, economical efficiency and performance index were calculated. The results revealed that the average body weight, body weight gain and feed consumption significantly (P 0.05) while liver increased significantly (P<0.05) in pro biotic FO and gizzard in all pro biotic group and antibiotic MO. The highest performance index was observed in groups of birds treated with pro biotic with MO followed by birds treated with pro biotic FO without significant difference. It could be concluded that supplementation of pro biotic in broiler diet containing different levels of RO was economically more beneficial than antibiotic

Early Triassic marine biotic recovery: the predators' perspective.

Science.gov (United States)

Scheyer, Torsten M; Romano, Carlo; Jenks, Jim; Bucher, Hugo

2014-01-01

Examining the geological past of our planet allows us to study periods of severe climatic and biological crises and recoveries, biotic and abiotic ecosystem fluctuations, and faunal and floral turnovers through time. Furthermore, the recovery dynamics of large predators provide a key for evaluation of the pattern and tempo of ecosystem recovery because predators are interpreted to react most sensitively to environmental turbulences. The end-Permian mass extinction was the most severe crisis experienced by life on Earth, and the common paradigm persists that the biotic recovery from the extinction event was unusually slow and occurred in a step-wise manner, lasting up to eight to nine million years well into the early Middle Triassic (Anisian) in the oceans, and even longer in the terrestrial realm. Here we survey the global distribution and size spectra of Early Triassic and Anisian marine predatory vertebrates (fishes, amphibians and reptiles) to elucidate the height of trophic pyramids in the aftermath of the end-Permian event. The survey of body size was done by compiling maximum standard lengths for the bony fishes and some cartilaginous fishes, and total size (estimates) for the tetrapods. The distribution and size spectra of the latter are difficult to assess because of preservation artifacts and are thus mostly discussed qualitatively. The data nevertheless demonstrate that no significant size increase of predators is observable from the Early Triassic to the Anisian, as would be expected from the prolonged and stepwise trophic recovery model. The data further indicate that marine ecosystems characterized by multiple trophic levels existed from the earliest Early Triassic onwards. However, a major change in the taxonomic composition of predatory guilds occurred less than two million years after the end-Permian extinction event, in which a transition from fish/amphibian to fish/reptile-dominated higher trophic levels within ecosystems became apparent.

Early Triassic marine biotic recovery: the predators' perspective.

Directory of Open Access Journals (Sweden)

Torsten M Scheyer

Full Text Available Examining the geological past of our planet allows us to study periods of severe climatic and biological crises and recoveries, biotic and abiotic ecosystem fluctuations, and faunal and floral turnovers through time. Furthermore, the recovery dynamics of large predators provide a key for evaluation of the pattern and tempo of ecosystem recovery because predators are interpreted to react most sensitively to environmental turbulences. The end-Permian mass extinction was the most severe crisis experienced by life on Earth, and the common paradigm persists that the biotic recovery from the extinction event was unusually slow and occurred in a step-wise manner, lasting up to eight to nine million years well into the early Middle Triassic (Anisian in the oceans, and even longer in the terrestrial realm. Here we survey the global distribution and size spectra of Early Triassic and Anisian marine predatory vertebrates (fishes, amphibians and reptiles to elucidate the height of trophic pyramids in the aftermath of the end-Permian event. The survey of body size was done by compiling maximum standard lengths for the bony fishes and some cartilaginous fishes, and total size (estimates for the tetrapods. The distribution and size spectra of the latter are difficult to assess because of preservation artifacts and are thus mostly discussed qualitatively. The data nevertheless demonstrate that no significant size increase of predators is observable from the Early Triassic to the Anisian, as would be expected from the prolonged and stepwise trophic recovery model. The data further indicate that marine ecosystems characterized by multiple trophic levels existed from the earliest Early Triassic onwards. However, a major change in the taxonomic composition of predatory guilds occurred less than two million years after the end-Permian extinction event, in which a transition from fish/amphibian to fish/reptile-dominated higher trophic levels within ecosystems became

Considerations in forecasting the demand for carbon sequestration and biotic storage technologies

Energy Technology Data Exchange (ETDEWEB)

Trexler, M.C. [Trexler and Associates, Inc., Portland, OR (United States)

1997-12-31

The Intergovernmental Panel on Climate Change (IPCC) has identified forestry and other land-use based mitigation measures as possible sources and sinks of greenhouse gases. An overview of sequestration and biotic storage is presented, and the potential impacts of the use of carbon sequestration as a mitigation technology are briefly noted. Carbon sequestration is also compare to other mitigation technologies. Biotic mitigation technologies are concluded to be a legitimate and potentially important part of greenhouse gas mitigation due to their relatively low costs, ancillary benefits, and climate impact. However, not all biotic mitigation techniques perfectly match the idealized definition of a mitigation measure, and policies are becoming increasingly biased against biotic technologies.

Integrating technology readiness into the expectation-confirmation model: an empirical study of mobile services.

Science.gov (United States)

Chen, Shih-Chih; Liu, Ming-Ling; Lin, Chieh-Peng

2013-08-01

The aim of this study was to integrate technology readiness into the expectation-confirmation model (ECM) for explaining individuals' continuance of mobile data service usage. After reviewing the ECM and technology readiness, an integrated model was demonstrated via empirical data. Compared with the original ECM, the findings of this study show that the integrated model may offer an ameliorated way to clarify what factors and how they influence the continuous intention toward mobile services. Finally, the major findings are summarized, and future research directions are suggested.

Experimental reduction in interaction intensity strongly affects biotic selection.

Science.gov (United States)

Sletvold, Nina; Ågren, Jon

2016-11-01

The link between biotic interaction intensity and strength of selection is of fundamental interest for understanding biotically driven diversification and predicting the consequences of environmental change. The strength of selection resulting from biotic interactions is determined by the strength of the interaction and by the covariance between fitness and the trait under selection. When the relationship between trait and absolute fitness is constant, selection strength should be a direct function of mean population interaction intensity. To test this prediction, we excluded pollinators for intervals of different length to induce five levels of pollination intensity within a single plant population. Pollen limitation (PL) increased from 0 to 0.77 across treatments, accompanied by a fivefold increase in the opportunity for selection. Trait-fitness covariance declined with PL for number of flowers, but varied little for other traits. Pollinator-mediated selection on plant height, corolla size, and spur length increased by 91%, 34%, and 330%, respectively, in the most severely pollen-limited treatment compared to open-pollinated plants. The results indicate that realized biotic selection can be predicted from mean population interaction intensity when variation in trait-fitness covariance is limited, and that declines in pollination intensity will strongly increase selection on traits involved in the interaction. © 2016 by the Ecological Society of America.

Regional consequences of a biotic interchange: insights from the Lessepsian invasion

Science.gov (United States)

Nawrot, Rafal; Albano, Paolo G.; Chattopadhyay, Devapriya; Zuschin, Martin

2016-04-01

The fossil record provides ample evidence of large-scale biotic interchanges and their pervasive effects on regional biotas, but mechanisms controlling such events are difficult to decipher in deep time. Massive invasion of Indo-Pacific species into the Mediterranean Sea triggered by the opening of the Suez Canal offers a unique opportunity to examine the ecological consequences of breaking down biogeographic barriers. We developed an extensive database of taxonomic composition, body size and ecological characteristics of the Red Sea and Mediterranean bivalve fauna in order to link biotic selectivity of the invasion process with its effects on the recipient biota. Shallow-water occurrence and presence outside the tropical zone in other regions are the strongest predictors of the successful transition through the Suez Canal. Subsequent establishment of alien species in the Mediterranean Sea correlates with early arrival and preference for hard substrates. Finally, large-bodied species and hard-bottom dwellers are over-represented among the invasive aliens that have reached the spread stage and impose a strong impact on native communities. Although body size is important only at the last invasion stage, alien species are significantly larger compared to native Mediterranean bivalves. This reflects biogeographic difference in the body-size distributions of the source and recipient species pools related to the recent geological history of the Mediterranean Sea. Contrary to the general expectations on the effects of temperature on average body size, continued warming of the Mediterranean Sea accelerates the entry of tropical aliens and thus indirectly leads to increase in the proportion of large-bodied species in local communities and the regional biota. Invasion-driven shifts in species composition are stronger in hard-substrate communities, which host a smaller pool of incumbent species and are more susceptible to the establishment of newcomers. Analogous differences

Integrated nursery pest management

Science.gov (United States)

R. Kasten Dumroese

2012-01-01

What is integrated pest management? Take a look at the definition of each word to better understand the concept. Two of the words (integrated and management) are relatively straightforward. Integrated means to blend pieces or concepts into a unified whole, and management is the wise use of techniques to successfully accomplish a desired outcome. A pest is any biotic (...

A Fish-Based Index of Biotic Integrity for the Assessment of Streams Located in a Sugarcane-Dominated Landscape in Southeastern Brazil

Science.gov (United States)

dos Santos, Fernanda Bastos; Esteves, Katharina Eichbaum

2015-08-01

A multimetric, fish-based Index of Biotic Integrity (IBI) was developed and tested to assess the ecological status of streams with different riparian conditions in the Piracicaba River Basin. Nine streams with three categories of riparian zone preservation were selected: native forest (NF) with preserved forest, secondary forest (SF) with forest in an advanced state of regeneration and surrounded by sugarcane plantations, and sugarcane (SC) without riparian vegetation and surrounded by SC crops. A continuous scoring system was employed, and candidate metrics were tested for range, responsiveness, and redundancy, resulting in the selection of eight metrics to compose the index. The final IBI score was positively correlated with an Environmental Index both in the dry (Spearman's rho = 0.76; P = 0.01) and rainy seasons (Spearman's rho = 0.66; P = 0.04), suggesting that this IBI is a suitable tool for the assessment of the biological conditions of these streams. The highest IBI values were observed in the rainy season at the NF and SF sites, with significant differences between the NF and SC sites (Kruskal-Wallis test: P = 0.03). The results indicated some variability in the biological integrity at SF and SC sites, suggesting a relationship with the intensity of the management of this crop. Patterns were consistent with other studies that have shown the effects of agriculture on the environmental quality of streams, which indicate the importance of the riparian zone to the maintenance of ecosystem integrity and supports the use of the IBI for biological monitoring in similar regions.

A Fish-Based Index of Biotic Integrity for the Assessment of Streams Located in a Sugarcane-Dominated Landscape in Southeastern Brazil.

Science.gov (United States)

dos Santos, Fernanda Bastos; Esteves, Katharina Eichbaum

2015-08-01

A multimetric, fish-based Index of Biotic Integrity (IBI) was developed and tested to assess the ecological status of streams with different riparian conditions in the Piracicaba River Basin. Nine streams with three categories of riparian zone preservation were selected: native forest (NF) with preserved forest, secondary forest (SF) with forest in an advanced state of regeneration and surrounded by sugarcane plantations, and sugarcane (SC) without riparian vegetation and surrounded by SC crops. A continuous scoring system was employed, and candidate metrics were tested for range, responsiveness, and redundancy, resulting in the selection of eight metrics to compose the index. The final IBI score was positively correlated with an Environmental Index both in the dry (Spearman's rho = 0.76; P = 0.01) and rainy seasons (Spearman's rho = 0.66; P = 0.04), suggesting that this IBI is a suitable tool for the assessment of the biological conditions of these streams. The highest IBI values were observed in the rainy season at the NF and SF sites, with significant differences between the NF and SC sites (Kruskal-Wallis test: P = 0.03). The results indicated some variability in the biological integrity at SF and SC sites, suggesting a relationship with the intensity of the management of this crop. Patterns were consistent with other studies that have shown the effects of agriculture on the environmental quality of streams, which indicate the importance of the riparian zone to the maintenance of ecosystem integrity and supports the use of the IBI for biological monitoring in similar regions.

Biotic and a-biotic Mn and Fe cycling in deep sediments across a gradient of sulfate reduction rates along the California margin

Science.gov (United States)

Schneider-Mor, A.; Steefel, C.; Maher, K.

2011-12-01

The coupling between the biological and a-biotic processes controlling trace metals in deep marine sediments are not well understood, although the fluxes of elements and trace metals across the sediment-water interface can be a major contribution to ocean water. Four marine sediment profiles (ODP leg 167 sites 1011, 1017, 1018 and 1020)were examined to evaluate and quantify the biotic and abiotic reaction networks and fluxes that occur in deep marine sediments. We compared biogeochemical processes across a gradient of sulfate reduction (SR) rates with the objective of studying the processes that control these rates and how they affect major elements as well as trace metal redistribution. The rates of sulfate reduction, methanogenesis and anaerobic methane oxidation (AMO) were constrained using a multicomponent reactive transport model (CrunchFlow). Constraints for the model include: sediment and pore water concentrations, as well as %CaCO3, %biogenic silica, wt% carbon and δ13C of total organic carbon (TOC), particulate organic matter (POC) and mineral associated carbon (MAC). The sites are distinguished by the depth of AMO: a shallow zone is observed at sites 1018 (9 to 19 meters composite depth (mcd)) and 1017 (19 to 30 mcd), while deeper zones occur at sites 1011 (56 to 76 mcd) and 1020 (101 to 116 mcd). Sulfate reduction rates at the shallow AMO sites are on the order 1x10-16 mol/L/yr, much faster than rates in the deeper zone sulfate reduction (1-3x10-17 mol/L/yr), as expected. The dissolved metal ion concentrations varied between the sites, with Fe (0.01-7 μM) and Mn (0.01-57 μM) concentrations highest at Site 1020 and lowest at site 1017. The highest Fe and Mn concentrations occurred at various depths, and were not directly correlated with the rates of sulfate reduction and the maximum alkalinity values. The main processes that control cycling of Fe are the production of sulfide from sulfate reduction and the distribution of Fe-oxides. The Mn distribution

Early biotic stress detection in tomato ( Solanum lycopersicum ) by BVOC emissions

NARCIS (Netherlands)

Kasal-Slavik, Tina; Eschweiler, Julia; Kleist, Einhard; Mumm, Roland; Goldbach, Heiner E.; Schouten, Sander; Wildt, Jürgen

2017-01-01

We investigated impacts of early and mild biotic stress on Biogenic Volatile Organic Compounds (BVOC) emissions from tomato in order to test their potential for early (biotic) stress detection. Tomato plants were exposed to two common fungal pathogens, Botrytis cinerea and Oidium neolycopesici and

Potential role of biotic transport models in low-level-waste management

International Nuclear Information System (INIS)

Kennedy, W.E. Jr.; Soldat, J.K.; Cadwell, L.L.; McKenzie, D.H.

1982-01-01

This paper is a summary of the initial results of a study being conducted for the US Nuclear Regulatory Commission (NRC) to determine the relevance of biotic pathways to the regulation of nuclear waste disposal. Biotic transport is defined as the actions of plants and animals that result in the transport of radioactive materials from a LLW burial ground to a location where they can enter exposure pathways to man. A critical review of the role of modeling in evaluating biotic transport is given. Both current applications and the need for future modeling development are discussed

Presence of riparian vegetation increases biotic condition of fish assemblages in two Brazilian reservoirs

Directory of Open Access Journals (Sweden)

Fabio Cop Ferreira

2015-09-01

Full Text Available Abstract The riparian vegetation in lakes and reservoirs is source of course wood structures such as trunks and branches and is used as sheltering, spawning and foraging habitats for fishes. The reduction of these submerged structures can thus, affect the composition and structure of fish assemblages in reservoirs. Aim To evaluate the influence of riparian vegetation on the biotic condition of fish assemblage by adapting the Reservoir Fish Assemblage Index (RFAI to two reservoirs in the Upper Paranapanema river basin, São Paulo State, Brazil. Methods The RFAI was adapted from metrics related to the functional characteristics and composition of fish assemblages through a protocol of metric selection and validation, and to its response to the presence of riparian vegetation. Results The final RFAI was composed by nine metrics, been lower in sites without riparian vegetation as consequence of the predominance of larger individuals and the percent of piscivorous and detritivorous fishes. Conclusions These results suggest that increasing shore habitat complexity in reservoirs by maintaining riparian vegetation increases fish biotic integrity.

Expectation values of local fields for a two-parameter family of integrable models and related perturbed conformal field theories

International Nuclear Information System (INIS)

Baseilhac, P.; Fateev, V.A.

1998-01-01

We calculate the vacuum expectation values of local fields for the two-parameter family of integrable field theories introduced and studied by Fateev (1996). Using this result we propose an explicit expression for the vacuum expectation values of local operators in parafermionic sine-Gordon models and in integrable perturbed SU(2) coset conformal field theories. (orig.)

Biotic turnover rates during the Pleistocene-Holocene transition

Science.gov (United States)

Stivrins, Normunds; Soininen, Janne; Amon, Leeli; Fontana, Sonia L.; Gryguc, Gražyna; Heikkilä, Maija; Heiri, Oliver; Kisielienė, Dalia; Reitalu, Triin; Stančikaitė, Miglė; Veski, Siim; Seppä, Heikki

2016-11-01

The Northern Hemisphere is currently warming at the rate which is unprecedented during the Holocene. Quantitative palaeoclimatic records show that the most recent time in the geological history with comparable warming rates was during the Pleistocene-Holocene transition (PHT) about 14,000 to 11,000 years ago. To better understand the biotic response to rapid temperature change, we explore the community turnover rates during the PHT by focusing on the Baltic region in the southeastern sector of the Scandinavian Ice Sheet, where an exceptionally dense network on microfossil and macrofossil data that reflect the biotic community history are available. We further use a composite chironomid-based summer temperature reconstruction compiled specifically for our study region to calculate the rate of temperature change during the PHT. The fastest biotic turnover in the terrestrial and aquatic communities occurred during the Younger Dryas-Holocene shift at 11,700 years ago. This general shift in species composition was accompanied by regional extinctions, including disappearance of mammoth (Mammuthus primigenius) and reindeer (Rangifer tarandus) and many arctic-alpine plant taxa, such as Dryas octopetala, Salix polaris and Saxifraga aizoides, from the region. This rapid biotic turnover rate occurred when the rate of warming was 0.17 °C/decade, thus slightly lower than the current Northern Hemisphere warming of 0.2 °C/decade. We therefore conclude that the Younger Dryas-Holocene shift with its rapid turnover rates and associated regional extinctions represents an important palaeoanalogue to the current high latitude warming and gives insights about the probable future turnover rates and patterns of the terrestrial and aquatic ecosystem change.

Biotic and abiotic stress tolerance in transgenic tomatoes by constitutive expression of S-adenosylmethionine decarboxylase gene.

Science.gov (United States)

Hazarika, Pranjal; Rajam, Manchikatla Venkat

2011-04-01

Recent findings have implicated the role of polyamines (putrescine, spermidine and spermine) in stress tolerance. Therefore, the present work was carried out with the goal of generating transgenic tomato plants with human S-adenosylmethionine decarboxylase (samdc) gene, a key gene involved in biosynthesis of polyamines, viz. spermidine and spermine and evaluating the transgenic plants for tolerance to both biotic and abiotic stresses. Several putative transgenic tomato plants with normal phenotype were obtained, and the transgene integration and expression was validated by PCR, Southern blot analysis and RT-PCR analysis, respectively. The transgenic plants exhibited high levels of polyamines as compared to the untransformed control plants. They also showed increased resistance against two important fungal pathogens of tomato, the wilt causing Fusarium oxysporum and the early blight causing Alternaria solani and tolerance to multiple abiotic stresses such as salinity, drought, cold and high temperature. These results suggest that engineering polyamine accumulation can confer tolerance to both biotic and abiotic stresses in plants.

Natural biotic resources in LCA: Towards an impact assessment model for sustainable supply chain management.

Science.gov (United States)

Crenna, Eleonora; Sozzo, Sara; Sala, Serenella

2018-01-20

Natural resources, biotic and abiotic, are fundamental from both the ecological and socio-economic point of view, being at the basis of life-support. However, since the demand for finite resources continues to increase, the sustainability of current production and consumption patterns is questioned both in developed and developing countries. A transition towards an economy based on biotic renewable resources (bio-economy) is considered necessary in order to support a steady provision of resources, representing an alternative to an economy based on fossil and abiotic resources. However, to ensure a sustainable use of biotic resources, there is the need of properly accounting for their use along supply chains as well as defining a robust and comprehensive impact assessment model. Since so far naturally occurring biotic resources have gained little attention in impact assessment methods, such as life cycle assessment, the aim of this study is to enable the inclusion of biotic resources in the assessment of products and supply chains. This paper puts forward a framework for biotic resources assessment, including: i) the definition of system boundaries between ecosphere and technosphere, namely between naturally occurring and man-made biotic resources; ii) a list of naturally occurring biotic resources which have a commercial value, as basis for building life cycle inventories (NOBR, e.g. wild animals, plants etc); iii) an impact pathway to identify potential impacts on both resource provision and ecosystem quality; iv) a renewability-based indicator (NOBRri) for the impact assessment of naturally occurring biotic resources, including a list of associated characterization factors. The study, building on a solid review of literature and of available statistical data, highlights and discusses the critical aspects and paradoxes related to biotic resource inclusion in LCA: from the system boundaries definition up to the resource characterization.

Biotic homogenization of three insect groups due to urbanization.

Science.gov (United States)

Knop, Eva

2016-01-01

Cities are growing rapidly, thereby expected to cause a large-scale global biotic homogenization. Evidence for the homogenization hypothesis is mostly derived from plants and birds, whereas arthropods have so far been neglected. Here, I tested the homogenization hypothesis with three insect indicator groups, namely true bugs, leafhoppers, and beetles. In particular, I was interested whether insect species community composition differs between urban and rural areas, whether they are more similar between cities than between rural areas, and whether the found pattern is explained by true species turnover, species diversity gradients and geographic distance, by non-native or specialist species, respectively. I analyzed insect species communities sampled on birch trees in a total of six Swiss cities and six rural areas nearby. In all indicator groups, urban and rural community composition was significantly dissimilar due to native species turnover. Further, for bug and leafhopper communities, I found evidence for large-scale homogenization due to urbanization, which was driven by reduced species turnover of specialist species in cities. Species turnover of beetle communities was similar between cities and rural areas. Interestingly, when specialist species of beetles were excluded from the analyses, cities were more dissimilar than rural areas, suggesting biotic differentiation of beetle communities in cities. Non-native species did not affect species turnover of the insect groups. However, given non-native arthropod species are increasing rapidly, their homogenizing effect might be detected more often in future. Overall, the results show that urbanization has a negative large-scale impact on the diversity specialist species of the investigated insect groups. Specific measures in cities targeted at increasing the persistence of specialist species typical for the respective biogeographic region could help to stop the loss of biodiversity. © 2015 John Wiley & Sons Ltd.

Enhanced effects of biotic interactions on predicting multispecies spatial distribution of submerged macrophytes after eutrophication.

Science.gov (United States)

Song, Kun; Cui, Yichong; Zhang, Xijin; Pan, Yingji; Xu, Junli; Xu, Kaiqin; Da, Liangjun

2017-10-01

Water eutrophication creates unfavorable environmental conditions for submerged macrophytes. In these situations, biotic interactions may be particularly important for explaining and predicting the submerged macrophytes occurrence. Here, we evaluate the roles of biotic interactions in predicting spatial occurrence of submerged macrophytes in 1959 and 2009 for Dianshan Lake in eastern China, which became eutrophic since the 1980s. For the four common species occurred in 1959 and 2009, null species distribution models based on abiotic variables and full models based on both abiotic and biotic variables were developed using generalized linear model (GLM) and boosted regression trees (BRT) to determine whether the biotic variables improved the model performance. Hierarchical Bayesian-based joint species distribution models capable of detecting paired biotic interactions were established for each species in both periods to evaluate the changes in the biotic interactions. In most of the GLM and BRT models, the full models showed better performance than the null models in predicting the species presence/absence, and the relative importance of the biotic variables in the full models increased from less than 50% in 1959 to more than 50% in 2009 for each species. Moreover, co-occurrence correlation of each paired species interaction was higher in 2009 than that in 1959. The findings suggest biotic interactions that tend to be positive play more important roles in the spatial distribution of multispecies assemblages of macrophytes and should be included in prediction models to improve prediction accuracy when forecasting macrophytes' distribution under eutrophication stress.

Impacts of agricultural land use on biological integrity: A causal analysis

Science.gov (United States)

Riseng, C.M.; Wiley, M.J.; Black, R.W.; Munn, M.D.

2011-01-01

Agricultural land use has often been linked to nutrient enrichment, habitat degradation, hydrologic alteration, and loss of biotic integrity in streams. The U.S. Geological Survey's National Water Quality Assessment Program sampled 226 stream sites located in eight agriculture-dominated study units across the United States to investigate the geographic variability and causes of agricultural impacts on stream biotic integrity. In this analysis we used structural equation modeling (SEM) to develop a national and set of regional causal models linking agricultural land use to measured instream conditions. We then examined the direct, indirect, and total effects of agriculture on biotic integrity as it acted through multiple water quality and habitat pathways. In our nation-wide model, cropland affected benthic communities by both altering structural habitats and by imposing water quality-related stresses. Regionspecific modeling demonstrated that geographic context altered the relative importance of causal pathways through which agricultural activities affected stream biotic integrity. Cropland had strong negative total effects on the invertebrate community in the national, Midwest, and Western models, but a very weak effect in the Eastern Coastal Plain model. In theWestern Arid and Eastern Coastal Plain study regions, cropland impacts were transmitted primarily through dissolved water quality contaminants, but in the Midwestern region, they were transmitted primarily through particulate components of water quality. Habitat effects were important in the Western Arid model, but negligible in the Midwest and Eastern Coastal Plain models. The relative effects of riparian forested wetlands also varied regionally, having positive effects on biotic integrity in the Eastern Coastal Plain andWestern Arid region models, but no statistically significant effect in the Midwest. These differences in response to cropland and riparian cover suggest that best management practices and

The Role of Silicon under Biotic and Abiotic Stress Conditions

Directory of Open Access Journals (Sweden)

İlkay YAVAŞ

2017-06-01

Full Text Available Biotic and abiotic stress factors can adversely affect the agricultural productivity leading to physiological and biochemical damage to crops. Therefore, the most effective way is to increase the resistance to stresses. Silicon plays a ro le in reducing the effects of abiotic and biotic stresses (drought, salt stress, disease and insect stress etc. on plants. Silicon is accumulated in the cell walls and intercellular spaces and thus it has beneficial effects on disease infestations in especially small grains. The application of silicon may reduce the effects of environmental stresses on plants while making effective use of plant nutrients such as nitrogen and phosphorous. Also, silicon may reduce the toxic effects of heavy metals in soil. I t may protect the foliage and increase light uptake and reduce respiration. Therefore, in this review, we discussed the effects of silicon on abiotic and biotic stresses in especially field crops.

Does prescribed burning result in biotic homogenization of coastal heathlands?

Science.gov (United States)

Velle, Liv Guri; Nilsen, Liv Sigrid; Norderhaug, Ann; Vandvik, Vigdis

2014-05-01

Biotic homogenization due to replacement of native biodiversity by widespread generalist species has been demonstrated in a number of ecosystems and taxonomic groups worldwide, causing growing conservation concern. Human disturbance is a key driver of biotic homogenization, suggesting potential conservation challenges in seminatural ecosystems, where anthropogenic disturbances such as grazing and burning are necessary for maintaining ecological dynamics and functioning. We test whether prescribed burning results in biotic homogenization in the coastal heathlands of north-western Europe, a seminatural landscape where extensive grazing and burning has constituted the traditional land-use practice over the past 6000 years. We compare the beta-diversity before and after fire at three ecological scales: within local vegetation patches, between wet and dry heathland patches within landscapes, and along a 470 km bioclimatic gradient. Within local patches, we found no evidence of homogenization after fire; species richness increased, and the species that entered the burnt Calluna stands were not widespread specialists but native grasses and herbs characteristic of the heathland system. At the landscapes scale, we saw a weak homogenization as wet and dry heathland patches become more compositionally similar after fire. This was because of a decrease in habitat-specific species unique to either wet or dry habitats and postfire colonization by a set of heathland specialists that established in both habitat types. Along the bioclimatic gradient, species that increased after fire generally had more specific environmental requirements and narrower geographical distributions than the prefire flora, resulting in a biotic 'heterogenisation' after fire. Our study demonstrates that human disturbance does not necessarily cause biotic homogenization, but that continuation of traditional land-use practices can instead be crucial for the maintenance of the diversity and ecological

Compartment specific importance of glutathione during abiotic and biotic stress

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Bernd eZechmann

2014-10-01

Full Text Available The tripeptide thiol glutathione (γ-L-glutamyl-L-cysteinyl-glycine is the most important sulfur containing antioxidant in plants and essential for plant defense against abiotic and biotic stress conditions. It is involved in the detoxification of reactive oxygen species, redox signaling, the modulation of defense gene expression and important for the regulation of enzymatic activities. Even though changes in glutathione contents are well documented in plants and its roles in plant defense are well established, still too little is known about its compartment specific importance during abiotic and biotic stress conditions. Due to technical advances in the visualization of glutathione and the redox state of plants through microscopical methods some progress was made in the last few years in studying the importance of subcellular glutathione contents during stress conditions in plants. This review summarizes the data available on compartment specific importance of glutathione in the protection against abiotic and biotic stress conditions such as high light stress, exposure to cadmium, drought, and pathogen attack (Pseudomonas, Botrytis, Tobacco Mosaic Virus. The data will be discussed in connection with the subcellular accumulation of ROS during these conditions and glutathione synthesis which are both highly compartment specific (e.g. glutathione synthesis takes place in chloroplasts and the cytosol. Thus this review will reveal the compartment specific importance of glutathione during abiotic and biotic stress conditions.

Locus of Control and Academic Achievement: Integrating Social Learning Theory and Expectancy-Value Theory

Science.gov (United States)

Youse, Keith Edward

2012-01-01

The current study examines predictors of math achievement and college graduation by integrating social learning theory and expectancy-value theory. Data came from a nationally-representative longitudinal database tracking 12,144 students over twelve years from 8th grade forward. Models for math achievement and college graduation were tested…

Do Karst Rivers “deserve” their own biotic index? A ten years study on macrozoobenthos in Croatia

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Rađa Biljana

2010-07-01

Full Text Available In this study we present the results of a ten year survey of the aquatic macroinvertebrate fauna along four karst rivers: Jadro, Žrnovnica, Grab and Ruda, all of them situated in the Middle Dalmatia region of Croatia, in an attempt to construct the Iliric Biotic Index, which will be more applicable for the water quality analysis than the most frequently applied biotic index in Croatia, the Italian Modification of Extended Biotic Index. The rivers geologically belong to the Dinaric karst, unique geological phenomena in Europe. Benthic macroinvertebrates were collected along each river at 15 sites by standard methods of sampling along with several physicochemical parameters, including: temperature, dissolved oxygen, carbon dioxide, alkalinity, hardness and pH. Univariate and multivariate techniques revealed differences in the macroinvertebrate community structure as well as in physicochemical parameters between the Karst rivers and continental rivers. Based on those differences, the Iliric Biotic Index was proposed as the standard of karst river water quality in Croatia in accordance with the EU Water Framework Directive. Differences between the Iliric Biotic Index and the most commonly used biotic indices in the European Community and the USA (The Biological Monitoring Working Party (B.M.W.P. scores, i.e. Extended Biotic Index, Indice Biotique, Family Biotic Index suggest that karst rivers need a new biotic index.

Abiotic and Biotic Formation of Amino Acids in the Enceladus Ocean.

Science.gov (United States)

Steel, Elliot L; Davila, Alfonso; McKay, Christopher P

2017-09-01

The active plume at Enceladus' south pole makes the indirect sampling of its global ocean possible. The partially resolved chemistry of the plume, which points to conditions that are seemingly compatible with life, has made orbital sampling missions a priority. We present a conceptual model of energy flux, hydrothermal H 2 production, and both abiotic and biotic production of amino acids. Based on the energy flux observed at the south pole and the inferred internal hydrothermal activity, we estimate an H 2 production of 0.6-34 mol/s from serpentinization, sufficient to sustain abiotic and biotic amino acid synthesis of 1.6-87 and 1-44 g/s, respectively. Two-dimensional (2D) numerical simulations of the hydrothermal vent suggest that the vent fluids could reach the ice-water boundary in less than 11-55 days for a 50 km deep ocean diluted by ambient ocean water 10 to 1. Concentrations of glycine, alanine, α-amino isobutyric acid, and glutamic acid in the plume and in the ambient ocean could all be above 0.01 μM just due to abiotic production. Biological synthesis, if occurring, could produce a maximum of 90 μM concentrations of amino acids based on a methanogenic ecosystem consuming H 2 and CO 2 . Racemization timescales in the ocean are short compared with production timescales. Thus, no enantiomeric excess is expected in the ambient ocean, and if biology is present, enantiomeric excess at the vent fluids is expected to be less than 10% in the plume. From vent H 2 concentrations of 7.8 mM (e.g., Lost City) and assuming complete H 2 use and conversion to chemical energy by methanogens, cell production is estimated. Annual biomass production in the methanogenic-based biology model is 4 × 10 4 -2 × 10 6 kg/year. This corresponds to cell concentrations ∼10 9 cells/cm 3 in the vents and ∼10 8 cells/cm 3 in the plume, and when diluted into the ambient ocean, we predict cell concentrations of 80-4250 cells/cm 3 . Key Words: Abiotic organic

Physico-chemical and biotic factors influencing microalgal seed ...

African Journals Online (AJOL)

Physico-chemical and biotic factors influencing microalgal seed culture propagation for inoculation of a ... African Journal of Biotechnology ... used to inoculate an open raceway pond for large scale biomass production for biodiesel production.

Quantitative patterns between plant volatile emissions induced by biotic stresses and the degree of damage

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Ülo eNiinemets

2013-07-01

Full Text Available Plants have to cope with a plethora of biotic stresses such as herbivory and pathogen attacks throughout their life cycle. The biotic stresses typically trigger rapid emissions of volatile products of lipoxygenase pathway (LOX products, various C6 aldehydes, alcohols and derivatives, also called green leaf volatiles associated with oxidative burst. Further a variety of defense pathways is activated, leading to induction of synthesis and emission of a complex blend of volatiles, often including methyl salicylate, indole, mono-, homo- and sesquiterpenes. The airborne volatiles are involved in systemic responses leading to elicitation of emissions from non-damaged plant parts. For several abiotic stresses, it has been demonstrated that volatile emissions are quantitatively related to the stress dose. The biotic impacts under natural conditions vary in severity from mild to severe, but it is unclear whether volatile emissions also scale with the severity of biotic stresses in a dose-dependent manner. Furthermore, biotic impacts are typically recurrent, but it is poorly understood how direct stress-triggered and systemic emission responses are silenced during periods intervening sequential stress events. Here we review the information on induced emissions elicited in response to biotic attacks, and argue that biotic stress severity vs. emission rate relationships should follow principally the same dose-response relationships as previously demonstrated for several abiotic stresses. Analysis of several case studies investigating the elicitation of emissions in response to chewing herbivores, aphids, rust fungi, powdery mildew and Botrytis, suggests that induced emissions do respond to stress severity in dose-dependent manner. Bi-phasic emission kinetics of several induced volatiles have been demonstrated in these experiments, suggesting that next to immediate stress-triggered emissions, biotic stress elicited emissions typically have a secondary

Column study of enhanced Cr(VI) removal and longevity by coupled abiotic and biotic processes using Fe⁰ and mixed anaerobic culture

DEFF Research Database (Denmark)

Zhong, Jiawei; Yin, Weizhao; Li, Yongtao

2017-01-01

In this study, Fe(0) and mixed anaerobic culture were integrated in one column to investigate the coupled abiotic and biotic effects on hexa-valent chromium (Cr(VI)) removal and column longevity with an abiotic Fe(0) column in the control experiments. According to the breakthrough study, a slower...

Linking macroecology and community ecology: refining predictions of species distributions using biotic interaction networks.

Science.gov (United States)

Staniczenko, Phillip P A; Sivasubramaniam, Prabu; Suttle, K Blake; Pearson, Richard G

2017-06-01

Macroecological models for predicting species distributions usually only include abiotic environmental conditions as explanatory variables, despite knowledge from community ecology that all species are linked to other species through biotic interactions. This disconnect is largely due to the different spatial scales considered by the two sub-disciplines: macroecologists study patterns at large extents and coarse resolutions, while community ecologists focus on small extents and fine resolutions. A general framework for including biotic interactions in macroecological models would help bridge this divide, as it would allow for rigorous testing of the role that biotic interactions play in determining species ranges. Here, we present an approach that combines species distribution models with Bayesian networks, which enables the direct and indirect effects of biotic interactions to be modelled as propagating conditional dependencies among species' presences. We show that including biotic interactions in distribution models for species from a California grassland community results in better range predictions across the western USA. This new approach will be important for improving estimates of species distributions and their dynamics under environmental change. © 2017 The Authors. Ecology Letters published by CNRS and John Wiley & Sons Ltd.

Changes in biotic and abiotic processes following mangrove clearing

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Granek, Elise; Ruttenberg, Benjamin I.

2008-12-01

Mangrove forests, important tropical coastal habitats, are in decline worldwide primarily due to removal by humans. Changes to mangrove systems can alter ecosystem properties through direct effects on abiotic factors such as temperature, light and nutrient supply or through changes in biotic factors such as primary productivity or species composition. Despite the importance of mangroves as transitional habitats between land and sea, little research has examined changes that occur when they are cleared. We examined changes in a number of biotic and abiotic factors following the anthropogenic removal of red mangroves ( Rhizophora mangle) in the Panamanian Caribbean, including algal biomass, algal diversity, algal grazing rates, light penetration, temperature, sedimentation rates and sediment organic content. In this first study examining multiple ecosystem-level effects of mangrove disturbance, we found that areas cleared of mangroves had higher algal biomass and richness than intact mangrove areas. This increase in algal biomass and richness was likely due to changes in abiotic factors (e.g. light intensity, temperature), but not biotic factors (fish herbivory). Additionally the algal and cyanobacterial genera dominating mangrove-cleared areas were rare in intact mangroves and included a number of genera that compete with coral for space on reefs. Interestingly, sedimentation rates did not differ between intact and cleared areas, but the sediments that accumulated in intact mangroves had higher organic content. These findings are the first to demonstrate that anthropogenic clearing of mangroves changes multiple biotic and abiotic processes in mangrove forests and that some of these changes may influence adjacent habitats such as coral reefs and seagrass beds. Additional research is needed to further explore the community and ecosystem-level effects of mangrove clearing and their influence on adjacent habitats, but it is clear that mangrove conservation is an

Development of a new biotic index to assess freshwater pollution

International Nuclear Information System (INIS)

Jiang Jianguo

2006-01-01

We developed a new biotic index of species pollution value (SPV) and community pollution value (CPV) based on the correlation of protozoan communities with chemical water quality to assess freshwater pollution. Five hundred and twenty-three species of protozoa SPV were established based on the data of River Hangjiang and Lake Donghu. The present research was conducted in order to further consummate the biotic index. Protozoa of the water system in Changde City were collected from 16 stations using the PFU method and the water chemical parameters of the stations were analyzed. The results showed that CPV calculated from SPV had a close correlation with the degree of water pollution (p < 0.00001), which indicated that the method is reliable. By combining the data of River Hangjiang, Lake Donghu and Changde City, the final form of SPV was accomplished and the SPV list increased to 757. The ultimate water standard evaluated by CPV calculated from SPV was proposed. - A new biotic index of water quality based on protozoa is described

Development of a new biotic index to assess freshwater pollution

Energy Technology Data Exchange (ETDEWEB)

Jiang Jianguo [College of Food and Bioengineering, South China University of Technology, Guangzhou 510640 (China)]. E-mail: jgjiang@scut.edu.cn

2006-01-15

We developed a new biotic index of species pollution value (SPV) and community pollution value (CPV) based on the correlation of protozoan communities with chemical water quality to assess freshwater pollution. Five hundred and twenty-three species of protozoa SPV were established based on the data of River Hangjiang and Lake Donghu. The present research was conducted in order to further consummate the biotic index. Protozoa of the water system in Changde City were collected from 16 stations using the PFU method and the water chemical parameters of the stations were analyzed. The results showed that CPV calculated from SPV had a close correlation with the degree of water pollution (p < 0.00001), which indicated that the method is reliable. By combining the data of River Hangjiang, Lake Donghu and Changde City, the final form of SPV was accomplished and the SPV list increased to 757. The ultimate water standard evaluated by CPV calculated from SPV was proposed. - A new biotic index of water quality based on protozoa is described.

Calcium Signalling in Plant Biotic Interactions

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Didier Aldon

2018-02-01

Full Text Available Calcium (Ca2+ is a universal second messenger involved in various cellular processes, leading to plant development and to biotic and abiotic stress responses. Intracellular variation in free Ca2+ concentration is among the earliest events following the plant perception of environmental change. These Ca2+ variations differ in their spatio-temporal properties according to the nature, strength and duration of the stimulus. However, their conversion into biological responses requires Ca2+ sensors for decoding and relaying. The occurrence in plants of calmodulin (CaM but also of other sets of plant-specific Ca2+ sensors such as calmodulin-like proteins (CMLs, Ca2+-dependent protein kinases (CDPKs and calcineurin B-like proteins (CBLs indicate that plants possess specific tools and machineries to convert Ca2+ signals into appropriate responses. Here, we focus on recent progress made in monitoring the generation of Ca2+ signals at the whole plant or cell level and their long distance propagation during biotic interactions. The contribution of CaM/CMLs and CDPKs in plant immune responses mounted against bacteria, fungi, viruses and insects are also presented.

Early biotic stress detection in tomato (Solanum lycopersicum) by BVOC emissions.

Science.gov (United States)

Kasal-Slavik, Tina; Eschweiler, Julia; Kleist, Einhard; Mumm, Roland; Goldbach, Heiner E; Schouten, Alexander; Wildt, Jürgen

2017-12-01

We investigated impacts of early and mild biotic stress on Biogenic Volatile Organic Compounds (BVOC) emissions from tomato in order to test their potential for early (biotic) stress detection. Tomato plants were exposed to two common fungal pathogens, Botrytis cinerea and Oidium neolycopesici and the sap-sucking aphid Myzus persicae. Furthermore, plants were exposed to methyl jasmonate (MeJA) in order to identify BVOC emissions related to activation of jasmonic acid (JA) signalling pathway. These emissions where then used as a reference for identifying active JA signalling pathway in plants at early stages of biotic stress. After infection by the necrotrophic fungus B. cinerea, changes in BVOC emissions indicated that tomato plants had predominantly activated the jasmonic acid (JA) signalling pathway. The plants were able to modify their defence pathways in order to overcome fungal infection. When tomato plants were infected with the biotrophic fungus O. neolycopersici, only minor changes in BVOC emissions were observed with additional emissions of the sesquiterpene α-copaene. α-copaene emissions allowed the identification of general biotic stress in the plants, without pinpointing the actual triggered defence pathway. BVOC emissions during M. persicae attack had changed before the occurrence of visual symptoms. Despite low infestation rates, plants emitted methyl salicylate indicating activation of the SA-mediated defence pathway. Copyright © 2017 Elsevier Ltd. All rights reserved.

Effect of Temperature on the Biotic Potential of Honeybee Microsporidia▿

Science.gov (United States)

Martín-Hernández, Raquel; Meana, Aránzazu; García-Palencia, Pilar; Marín, Pilar; Botías, Cristina; Garrido-Bailón, Encarna; Barrios, Laura; Higes, Mariano

2009-01-01

The biological cycle of Nosema spp. in honeybees depends on temperature. When expressed as total spore counts per day after infection, the biotic potentials of Nosema apis and N. ceranae at 33°C were similar, but a higher proportion of immature stages of N. ceranae than of N. apis were seen. At 25 and 37°C, the biotic potential of N. ceranae was higher than that of N. apis. The better adaptation of N. ceranae to complete its endogenous cycle at different temperatures clearly supports the observation of the different epidemiological patterns. PMID:19233948

Climate change and the past, present, and future of biotic interactions.

Science.gov (United States)

Blois, Jessica L; Zarnetske, Phoebe L; Fitzpatrick, Matthew C; Finnegan, Seth

2013-08-02

Biotic interactions drive key ecological and evolutionary processes and mediate ecosystem responses to climate change. The direction, frequency, and intensity of biotic interactions can in turn be altered by climate change. Understanding the complex interplay between climate and biotic interactions is thus essential for fully anticipating how ecosystems will respond to the fast rates of current warming, which are unprecedented since the end of the last glacial period. We highlight episodes of climate change that have disrupted ecosystems and trophic interactions over time scales ranging from years to millennia by changing species' relative abundances and geographic ranges, causing extinctions, and creating transient and novel communities dominated by generalist species and interactions. These patterns emerge repeatedly across disparate temporal and spatial scales, suggesting the possibility of similar underlying processes. Based on these findings, we identify knowledge gaps and fruitful areas for research that will further our understanding of the effects of climate change on ecosystems.

Application of Irradiated Pro biotic Microorganism in Black Tiger Shrimp (Penaeus monodon Fabricius) Culture

International Nuclear Information System (INIS)

Areechon, Nontawith; Purivrojkul, Watchariya; Srisapoome, Prapansak; Piadiang, Nattaya

2006-09-01

Marine shrimp culture in Thailand has been developed continuously for the past two decades. This development will ensure the highest level of shrimp quality that will be suitable for the consumption of the people in the country and also aboard. The trend of culture system emphasizes on disease prevention more than treatment which will consequently limit the application of drug and chemicals. Application of pro biotic has been one means of this prevention that are commonly practiced by shrimp farmers. This research was conducted to compare the efficacy of normal Bacillus subtilis isolate from shrimp intestine and an irradiated B. subtilis as a pro biotic in shrimp feed. It was found that overall results were quite the same. These included the broth Co-culture assay. Effects on immune functions were conducted with Penaeus monodon with initial average weight of 17 gms by feeding with 3 gms/kg feed of spore of these two pro biotic for two mouths. The results indicated that both pro biotic caused significant improvement on percent phagocytosis only at the forth week of feeding trial and the overall enhancement of bactericidal activity. However, total haemocyte count and phenoloxidase activity were not altered. Total bacterial count in shrimp intestine was also conducted during the two month trial. the results indicated significant reduction of Vibrio spp. of both pro biotic groups when compared with the control. Number of Bacillus spp. in intestine were continuously high even after pro biotic treatment had been stopped Growth rate of experiment and control shrimp was not significantly different.

The Importance of Biotic vs. Abiotic Drivers of Local Plant Community Composition Along Regional Bioclimatic Gradients.

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Kari Klanderud

Full Text Available We assessed if the relative importance of biotic and abiotic factors for plant community composition differs along environmental gradients and between functional groups, and asked which implications this may have in a warmer and wetter future. The study location is a unique grid of sites spanning regional-scale temperature and precipitation gradients in boreal and alpine grasslands in southern Norway. Within each site we sampled vegetation and associated biotic and abiotic factors, and combined broad- and fine-scale ordination analyses to assess the relative explanatory power of these factors for species composition. Although the community responses to biotic and abiotic factors did not consistently change as predicted along the bioclimatic gradients, abiotic variables tended to explain a larger proportion of the variation in species composition towards colder sites, whereas biotic variables explained more towards warmer sites, supporting the stress gradient hypothesis. Significant interactions with precipitation suggest that biotic variables explained more towards wetter climates in the sub alpine and boreal sites, but more towards drier climates in the colder alpine. Thus, we predict that biotic interactions may become more important in alpine and boreal grasslands in a warmer future, although more winter precipitation may counteract this trend in oceanic alpine climates. Our results show that both local and regional scales analyses are needed to disentangle the local vegetation-environment relationships and their regional-scale drivers, and biotic interactions and precipitation must be included when predicting future species assemblages.

Effect of abiotic and biotic stress factors analysis using machine learning methods in zebrafish.

Science.gov (United States)

Gutha, Rajasekar; Yarrappagaari, Suresh; Thopireddy, Lavanya; Reddy, Kesireddy Sathyavelu; Saddala, Rajeswara Reddy

2018-03-01

In order to understand the mechanisms underlying stress responses, meta-analysis of transcriptome is made to identify differentially expressed genes (DEGs) and their biological, molecular and cellular mechanisms in response to stressors. The present study is aimed at identifying the effect of abiotic and biotic stress factors, and it is found that several stress responsive genes are common for both abiotic and biotic stress factors in zebrafish. The meta-analysis of micro-array studies revealed that almost 4.7% i.e., 108 common DEGs are differentially regulated between abiotic and biotic stresses. This shows that there is a global coordination and fine-tuning of gene regulation in response to these two types of challenges. We also performed dimension reduction methods, principal component analysis, and partial least squares discriminant analysis which are able to segregate abiotic and biotic stresses into separate entities. The supervised machine learning model, recursive-support vector machine, could classify abiotic and biotic stresses with 100% accuracy using a subset of DEGs. Beside these methods, the random forests decision tree model classified five out of 8 stress conditions with high accuracy. Finally, Functional enrichment analysis revealed the different gene ontology terms, transcription factors and miRNAs factors in the regulation of stress responses. Copyright © 2017 Elsevier Inc. All rights reserved.

Development of a Wireless Computer Vision Instrument to Detect Biotic Stress in Wheat

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Joaquin J. Casanova

2014-09-01

Full Text Available Knowledge of crop abiotic and biotic stress is important for optimal irrigation management. While spectral reflectance and infrared thermometry provide a means to quantify crop stress remotely, these measurements can be cumbersome. Computer vision offers an inexpensive way to remotely detect crop stress independent of vegetation cover. This paper presents a technique using computer vision to detect disease stress in wheat. Digital images of differentially stressed wheat were segmented into soil and vegetation pixels using expectation maximization (EM. In the first season, the algorithm to segment vegetation from soil and distinguish between healthy and stressed wheat was developed and tested using digital images taken in the field and later processed on a desktop computer. In the second season, a wireless camera with near real-time computer vision capabilities was tested in conjunction with the conventional camera and desktop computer. For wheat irrigated at different levels and inoculated with wheat streak mosaic virus (WSMV, vegetation hue determined by the EM algorithm showed significant effects from irrigation level and infection. Unstressed wheat had a higher hue (118.32 than stressed wheat (111.34. In the second season, the hue and cover measured by the wireless computer vision sensor showed significant effects from infection (p = 0.0014, as did the conventional camera (p < 0.0001. Vegetation hue obtained through a wireless computer vision system in this study is a viable option for determining biotic crop stress in irrigation scheduling. Such a low-cost system could be suitable for use in the field in automated irrigation scheduling applications.

The Role of Tomato WRKY Genes in Plant Responses to Combined Abiotic and Biotic Stresses

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Yuling Bai

2018-06-01

Full Text Available In the field, plants constantly face a plethora of abiotic and biotic stresses that can impart detrimental effects on plants. In response to multiple stresses, plants can rapidly reprogram their transcriptome through a tightly regulated and highly dynamic regulatory network where WRKY transcription factors can act as activators or repressors. WRKY transcription factors have diverse biological functions in plants, but most notably are key players in plant responses to biotic and abiotic stresses. In tomato there are 83 WRKY genes identified. Here we review recent progress on functions of these tomato WRKY genes and their homologs in other plant species, such as Arabidopsis and rice, with a special focus on their involvement in responses to abiotic and biotic stresses. In particular, we highlight WRKY genes that play a role in plant responses to a combination of abiotic and biotic stresses.

Biotic and Climatic Velocity Identify Contrasting Areas of Vulnerability to Climate Change

Science.gov (United States)

Carroll, Carlos; Lawler, Joshua J.; Roberts, David R.; Hamann, Andreas

2015-01-01

Metrics that synthesize the complex effects of climate change are essential tools for mapping future threats to biodiversity and predicting which species are likely to adapt in place to new climatic conditions, disperse and establish in areas with newly suitable climate, or face the prospect of extirpation. The most commonly used of such metrics is the velocity of climate change, which estimates the speed at which species must migrate over the earth’s surface to maintain constant climatic conditions. However, “analog-based” velocities, which represent the actual distance to where analogous climates will be found in the future, may provide contrasting results to the more common form of velocity based on local climate gradients. Additionally, whereas climatic velocity reflects the exposure of organisms to climate change, resultant biotic effects are dependent on the sensitivity of individual species as reflected in part by their climatic niche width. This has motivated development of biotic velocity, a metric which uses data on projected species range shifts to estimate the velocity at which species must move to track their climatic niche. We calculated climatic and biotic velocity for the Western Hemisphere for 1961–2100, and applied the results to example ecological and conservation planning questions, to demonstrate the potential of such analog-based metrics to provide information on broad-scale patterns of exposure and sensitivity. Geographic patterns of biotic velocity for 2954 species of birds, mammals, and amphibians differed from climatic velocity in north temperate and boreal regions. However, both biotic and climatic velocities were greatest at low latitudes, implying that threats to equatorial species arise from both the future magnitude of climatic velocities and the narrow climatic tolerances of species in these regions, which currently experience low seasonal and interannual climatic variability. Biotic and climatic velocity, by approximating

Column study of enhanced Cr(VI) removal and longevity by coupled abiotic and biotic processes using Fe0 and mixed anaerobic culture.

Science.gov (United States)

Zhong, Jiawei; Yin, Weizhao; Li, Yongtao; Li, Ping; Wu, Jinhua; Jiang, Gangbiao; Gu, Jingjing; Liang, Hao

2017-10-01

In this study, Fe 0 and mixed anaerobic culture were integrated in one column to investigate the coupled abiotic and biotic effects on hexa-valent chromium (Cr(VI)) removal and column longevity with an abiotic Fe 0 column in the control experiments. According to the breakthrough study, a slower Cr(VI) breakthrough rate of 0.19 cm/PV was observed in the biotic Fe 0 column whereas the value in the abiotic Fe 0 column was 0.30 cm/PV, resulting in 64% longer life-span and 62% higher Cr(VI) removal capacity in the biotic Fe 0 column than the abiotic one. The solid phase characterization by scanning electron microscopy (SEM), energy dispersive X-ray (EDX) and X-ray diffraction (XRD) confirmed that this enhancement was attributed to the higher consumption of iron and greater production of diverse reactive minerals (e.g., green rust, magnetite and lepidocrocite) induced by the synergistic interaction of Fe 0 and anaerobic culture, providing more reactive sites for Cr(VI) adsorption, reduction and co-precipitation. Furthermore, the decreasing breakthrough rates and growing iron corrosion along the biotic Fe 0 column demonstrated an inhomogeneous distribution of reactive zones in the column and its latter 3/5 section was considered to be the most reactive area for Cr(VI) removal. These results indicate that the inoculation of microorganisms in Fe 0 -based permeable reactive barriers will enable this technology a higher removal capacity and longer life-span for the remediation of Cr(VI)-contaminated groundwater. Copyright © 2017 Elsevier Ltd. All rights reserved.

Biotic interactions mediate soil microbial feedbacks to climate change

Czech Academy of Sciences Publication Activity Database

Crowther, T. W.; Thomas, S.M.; Maynard, D.S.; Baldrian, Petr; Covey, K.; Frey, S. D.; van Diepen, L. T. A.; Bradford, M.A.

2015-01-01

Roč. 112, č. 22 (2015), s. 7033-7038 ISSN 0027-8424 Institutional support: RVO:61388971 Keywords : global change * soil feedback * biotic interaction Subject RIV: EE - Microbiology, Virology Impact factor: 9.423, year: 2015

Assessment of derelict soil quality: Abiotic, biotic and functional approaches.

Science.gov (United States)

Vincent, Quentin; Auclerc, Apolline; Beguiristain, Thierry; Leyval, Corinne

2018-02-01

The intensification and subsequent closing down of industrial activities during the last century has left behind large surfaces of derelict lands. Derelict soils have low fertility, can be contaminated, and many of them remain unused. However, with the increasing demand of soil surfaces, they might be considered as a resource, for example for non-food biomass production. The study of their physico-chemical properties and of their biodiversity and biological activity may provide indications for their potential re-use. The objective of our study was to investigate the quality of six derelict soils, considering abiotic, biotic, and functional parameters. We studied (i) the soil bacteria, fungi, meso- and macro-fauna and plant communities of six different derelict soils (two from coking plants, one from a settling pond, two constructed ones made from different substrates and remediated soil, and an inert waste storage one), and (ii) their decomposition function based on the decomposer trophic network, enzyme activities, mineralization activity, and organic pollutant degradation. Biodiversity levels in these soils were high, but all biotic parameters, except the mycorrhizal colonization level, discriminated them. Multivariate analysis showed that biotic parameters co-varied more with fertility proxies than with soil contamination parameters. Similarly, functional parameters significantly co-varied with abiotic parameters. Among functional parameters, macro-decomposer proportion, enzyme activity, average mineralization capacity, and microbial polycyclic aromatic hydrocarbon degraders were useful to discriminate the soils. We assessed their quality by combining abiotic, biotic, and functional parameters: the compost-amended constructed soil displayed the highest quality, while the settling pond soil and the contaminated constructed soil displayed the lowest. Although differences among the soils were highlighted, this study shows that derelict soils may provide a

Potential for biotic resistance from herbivores to tropical and subtropical plant invasions in aquatic ecosystems

NARCIS (Netherlands)

Petruzella, A.; Grutters, B.M.C.; Thomaz, S.M.; Bakker, E.S.

2017-01-01

Invasions of tropical and subtropical aquatic plants threaten biodiversity and cause ecological and economic impacts worldwide. An urgent question is whether native herbivores are able to inhibit the spread of these alien species thus providing biotic resistance. The potential for biotic resistance

Patient-centredness in integrated healthcare delivery systems - needs, expectations and priorities for organised healthcare systems.

Science.gov (United States)

Juhnke, Christin; Mühlbacher, Axel C

2013-01-01

Patient-centred healthcare is becoming a more significant success factor in the design of integrated healthcare systems. The objective of this study is to structure a patient-relevant hierarchy of needs and expectations for the design of organised healthcare delivery systems. A questionnaire with 84 items was conducted with N = 254 healthcare experts and N = 670 patients. Factor analyses were performed using SPSS©18. The number of factors retained was controlled by Kaiser's criterion, validation of screeplots and interpretability of the items. Cronbach's α was used to assess the internal consistency of the subscales. Exploratory factor analysis led to 24 factors in the expert sample and 20 in the patient sample. After analysing the screeplots, confirmatory factor analyses were computed for 7-factor solutions accounting for 42.963% of the total variance and Kaiser-Meyer-Olkin of 0.914 for the patients (experts: 38.427%, Kaiser-Meyer-Olkin = 0.797). Cronbach's α ranged between 0.899 and 0.756. Based on the analysis, coordinated care could be differentiated into seven dimensions: access, data and information, service and infrastructure, professional care, interpersonal care, individualised care, continuity and coordination. The study provides insight into patient and experts expectations towards the organisation of integrated healthcare delivery systems. If providers and payers can take into account patient needs and expectations while implementing innovative healthcare delivery systems, greater acceptance and satisfaction will be achieved. In the best case, this will lead to better adherence resulting in better clinical outcomes.

Electrode impedance analysis of chronic tungsten microwire neural implants: understanding abiotic vs. biotic contributions

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Viswanath eSankar

2014-05-01

Full Text Available Changes in biotic and abiotic factors can be reflected in the complex impedance spectrum of the microelectrodes chronically implanted into the neural tissue. The recording surface of the tungsten electrode in vivo undergoes abiotic changes due to recording site corrosion and insulation delamination as well as biotic changes due to tissue encapsulation as a result of the foreign body immune response. We reported earlier that large changes in electrode impedance measured at 1 kHz were correlated with poor electrode functional performance, quantified through electrophysiological recordings during the chronic lifetime of the electrode. There is a need to identity the factors that contribute to the chronic impedance variation. In this work, we use numerical simulation and regression to equivalent circuit models to evaluate both the abiotic and biotic contributions to the impedance response over chronic implant duration. COMSOL® simulation of abiotic electrode morphology changes provide a possible explanation for the decrease in the electrode impedance at long implant duration while biotic changes play an important role in the large increase in impedance observed initially.

Music and language perception: expectations, structural integration, and cognitive sequencing.

Science.gov (United States)

Tillmann, Barbara

2012-10-01

Music can be described as sequences of events that are structured in pitch and time. Studying music processing provides insight into how complex event sequences are learned, perceived, and represented by the brain. Given the temporal nature of sound, expectations, structural integration, and cognitive sequencing are central in music perception (i.e., which sounds are most likely to come next and at what moment should they occur?). This paper focuses on similarities in music and language cognition research, showing that music cognition research provides insight into the understanding of not only music processing but also language processing and the processing of other structured stimuli. The hypothesis of shared resources between music and language processing and of domain-general dynamic attention has motivated the development of research to test music as a means to stimulate sensory, cognitive, and motor processes. Copyright © 2012 Cognitive Science Society, Inc.

Effects of biotic interactions and dispersal on the presence-absence of multiple species

International Nuclear Information System (INIS)

Mohd, Mohd Hafiz; Murray, Rua; Plank, Michael J.; Godsoe, William

2017-01-01

One of the important issues in ecology is to predict which species will be present (or absent) across a geographical region. Dispersal is thought to have an important influence on the range limits of species, and understanding this problem in a multi-species community with priority effects (i.e. initial abundances determine species presence-absence) is a challenging task because dispersal also interacts with biotic and abiotic factors. Here, we propose a simple multi-species model to investigate the joint effects of biotic interactions and dispersal on species presence-absence. Our results show that dispersal can substantially expand species ranges when biotic and abiotic forces are present; consequently, coexistence of multiple species is possible. The model also exhibits ecologically interesting priority effects, mediated by intense biotic interactions. In the absence of dispersal, competitive exclusion of all but one species occurs. We find that dispersal reduces competitive exclusion effects that occur in no-dispersal case and promotes coexistence of multiple species. These results also show that priority effects are still prevalent in multi-species communities in the presence of dispersal process. We also illustrate the existence of threshold values of competitive strength (i.e. transcritical bifurcations), which results in different species presence-absence in multi-species communities with and without dispersal.

Can we trace biotic dispersals back in time? Introducing backward flow connectivity

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Alessandro Ferrarini

2014-06-01

Full Text Available Connectivity in ecology deals with the problem of how species dispersal will happen given actual landscape and species presence/absence over such landscape. Hence it can be considered a forward (ahead in time scientific problem. I observe here that a backward theory of connectivity could be of deep interest as well: given the actual species presence/absence on the landscape, where with the highest probability such species is coming from? In other words, can we trace biotic dispersals back in time? Recently I have introduced a modelling and theoretical approach to ecological connectivity that is alternative to circuit theory and is able to fix the weak point of the "from-to" connectivity approach. The proposed approach holds also for mountain and hilly landscapes. In addition, it doesn't assume any intention for a species to go from source points to sink ones, because the expected path for the species is determined locally (pixel by pixel by landscape features. In this paper, I introduce a new theoretical and modelling approach called "backward flow connectivity". While flow connectivity predicts future species dispersal by minimizing at each step the potential energy due to fictional gravity over a frictional landscape, backward flow connectivity does exactly the opposite, i.e. maximizes potential energy at each step sending back the species to higher levels of potential energy due to fictional gravity on the frictional landscape. Using backward flow connectivity, one has at hand a new tool to revert timeline of species dispersal, hence being able to trace backward biotic dispersals. With few modifications, the applications of backward flow connectivity can be countless, for instance tracing back-in-time not only plants and animals but also ancient human migrations and viral paths.

Patient-centeredness in Integrated healthcare delivery systems - Needs, expectations and priorities for organized healthcare systems

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Christin Juhnke

2013-11-01

Full Text Available Introduction: Patient-centred healthcare is becoming a more significant success factor in the design of integrated healthcare systems. The objective of this study is to structure a patient-relevant hierarchy of needs and expectations for the design of organised healthcare delivery systems. Methods: A questionnaire with 84 items was conducted with N = 254 healthcare experts and N = 670 patients. Factor analyses were performed using SPSS©18. The number of factors retained was controlled by Kaiser's criterion, validation of screeplots and interpretability of the items. Cronbach's α was used to assess the internal consistency of the subscales. Results: Exploratory factor analysis led to 24 factors in the expert sample and 20 in the patient sample. After analysing the screeplots, confirmatory factor analyses were computed for 7-factor solutions accounting for 42.963% of the total variance and Kaiser–Meyer–Olkinof 0.914 for the patients (experts: 38.427%, Kaiser–Meyer–Olkin = 0.797. Cronbach's α ranged between 0.899 and 0.756. Based on the analysis, coordinated care could be differentiated into seven dimensions: access, data and information, service and infrastructure, professional care, interpersonal care, individualised care, continuity and coordination. Conclusion and Discussion: The study provides insight into patient and experts expectations towards the organisation of integrated healthcare delivery systems. If providers and payers can take into account patient needs and expectations while implementing innovative healthcare delivery systems, greater acceptance and satisfaction will be achieved. In the best case, this will lead to better adherence resulting in better clinical outcomes.

Patient-centeredness in Integrated healthcare delivery systems - Needs, expectations and priorities for organized healthcare systems

Directory of Open Access Journals (Sweden)

Christin Juhnke

2013-11-01

Full Text Available Introduction: Patient-centred healthcare is becoming a more significant success factor in the design of integrated healthcare systems. The objective of this study is to structure a patient-relevant hierarchy of needs and expectations for the design of organised healthcare delivery systems.Methods: A questionnaire with 84 items was conducted with N = 254 healthcare experts and N = 670 patients. Factor analyses were performed using SPSS©18. The number of factors retained was controlled by Kaiser's criterion, validation of screeplots and interpretability of the items. Cronbach's α was used to assess the internal consistency of the subscales.Results: Exploratory factor analysis led to 24 factors in the expert sample and 20 in the patient sample. After analysing the screeplots, confirmatory factor analyses were computed for 7-factor solutions accounting for 42.963% of the total variance and Kaiser–Meyer–Olkinof 0.914 for the patients (experts: 38.427%, Kaiser–Meyer–Olkin = 0.797. Cronbach's α ranged between 0.899 and 0.756. Based on the analysis, coordinated care could be differentiated into seven dimensions: access, data and information, service and infrastructure, professional care, interpersonal care, individualised care, continuity and coordination.Conclusion and Discussion: The study provides insight into patient and experts expectations towards the organisation of integrated healthcare delivery systems. If providers and payers can take into account patient needs and expectations while implementing innovative healthcare delivery systems, greater acceptance and satisfaction will be achieved. In the best case, this will lead to better adherence resulting in better clinical outcomes.

Pattern and process of biotic homogenization in the New Pangaea.

Science.gov (United States)

Baiser, Benjamin; Olden, Julian D; Record, Sydne; Lockwood, Julie L; McKinney, Michael L

2012-12-07

Human activities have reorganized the earth's biota resulting in spatially disparate locales becoming more or less similar in species composition over time through the processes of biotic homogenization and biotic differentiation, respectively. Despite mounting evidence suggesting that this process may be widespread in both aquatic and terrestrial systems, past studies have predominantly focused on single taxonomic groups at a single spatial scale. Furthermore, change in pairwise similarity is itself dependent on two distinct processes, spatial turnover in species composition and changes in gradients of species richness. Most past research has failed to disentangle the effect of these two mechanisms on homogenization patterns. Here, we use recent statistical advances and collate a global database of homogenization studies (20 studies, 50 datasets) to provide the first global investigation of the homogenization process across major faunal and floral groups and elucidate the relative role of changes in species richness and turnover. We found evidence of homogenization (change in similarity ranging from -0.02 to 0.09) across nearly all taxonomic groups, spatial extent and grain sizes. Partitioning of change in pairwise similarity shows that overall change in community similarity is driven by changes in species richness. Our results show that biotic homogenization is truly a global phenomenon and put into question many of the ecological mechanisms invoked in previous studies to explain patterns of homogenization.

Quantitative XRD analysis of {110} twin density in biotic aragonites.

Science.gov (United States)

Suzuki, Michio; Kim, Hyejin; Mukai, Hiroki; Nagasawa, Hiromichi; Kogure, Toshihiro

2012-12-01

{110} Twin densities in biotic aragonite have been estimated quantitatively from the peak widths of specific reflections in powder X-ray diffraction (XRD) patterns, as well as direct confirmation of the twins using transmission electron microscopy (TEM). Influence of the twin density on the peak widths in the XRD pattern was simulated using DIFFaX program, regarding (110) twin as interstratification of two types of aragonite unit layers with mirrored relationship. The simulation suggested that the twin density can be estimated from the difference of the peak widths between 111 and 021, or between 221 and 211 reflections. Biotic aragonite in the crossed-lamellar microstructure (three species) and nacreous microstructure (four species) of molluscan shells, fish otoliths (two species), and a coral were investigated. The XRD analyses indicated that aragonite crystals in the crossed-lamellar microstructure of the three species contain high density of the twins, which is consistent with the TEM examination. On the other hand, aragonite in the nacre of the four species showed almost no difference of the peak widths between the paired reflections, indicating low twin densities. The results for the fish otoliths were varied between the species. Such variation of the twin density in biotic aragonites may reflect different schemes of crystal growth in biomineralization. Copyright © 2012 Elsevier Inc. All rights reserved.

Environmental Maternal Effects Mediate the Resistance of Maritime Pine to Biotic Stress

Science.gov (United States)

Vivas, María; Zas, Rafael; Sampedro, Luis; Solla, Alejandro

2013-01-01

The resistance to abiotic stress is increasingly recognised as being impacted by maternal effects, given that environmental conditions experienced by parent (mother) trees affect stress tolerance in offspring. We hypothesised that abiotic environmental maternal effects may also mediate the resistance of trees to biotic stress. The influence of maternal environment and maternal genotype and the interaction of these two factors on early resistance of Pinus pinaster half-sibs to the Fusarium circinatum pathogen was studied using 10 mother genotypes clonally replicated in two contrasting environments. Necrosis length of infected seedlings was 16% shorter in seedlings grown from favourable maternal environment seeds than in seedlings grown from unfavourable maternal environment seeds. Damage caused by F. circinatum was mediated by maternal environment and maternal genotype, but not by seed mass. Mechanisms unrelated to seed provisioning, perhaps of epigenetic nature, were probably involved in the transgenerational plasticity of P. pinaster, mediating its resistance to biotic stress. Our findings suggest that the transgenerational resistance of pines due to an abiotic stress may interact with the defensive response of pines to a biotic stress. PMID:23922944

Environmental maternal effects mediate the resistance of maritime pine to biotic stress.

Directory of Open Access Journals (Sweden)

María Vivas

Full Text Available The resistance to abiotic stress is increasingly recognised as being impacted by maternal effects, given that environmental conditions experienced by parent (mother trees affect stress tolerance in offspring. We hypothesised that abiotic environmental maternal effects may also mediate the resistance of trees to biotic stress. The influence of maternal environment and maternal genotype and the interaction of these two factors on early resistance of Pinus pinaster half-sibs to the Fusarium circinatum pathogen was studied using 10 mother genotypes clonally replicated in two contrasting environments. Necrosis length of infected seedlings was 16% shorter in seedlings grown from favourable maternal environment seeds than in seedlings grown from unfavourable maternal environment seeds. Damage caused by F. circinatum was mediated by maternal environment and maternal genotype, but not by seed mass. Mechanisms unrelated to seed provisioning, perhaps of epigenetic nature, were probably involved in the transgenerational plasticity of P. pinaster, mediating its resistance to biotic stress. Our findings suggest that the transgenerational resistance of pines due to an abiotic stress may interact with the defensive response of pines to a biotic stress.

Abiotic and biotic controls on local spatial distribution and performance of Boechera stricta

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KUSUM J NAITHANI

2014-07-01

Full Text Available This study investigates the relative influence of biotic and abiotic factors on community dynamics using an integrated approach and highlights the influence of space on genotypic and phenotypic traits in plant community structure. We examined the relative influence of topography, environment, spatial distance, and intra- and interspecific interactions on spatial distribution and performance of Boechera stricta (rockcress, a close perennial relative of model plant Arabidopsis. First, using Bayesian kriging, we mapped the topography and environmental gradients and explored the spatial distribution of naturally occurring rockcress plants and two neighbors, Taraxacum officinale (dandelion and Solidago missouriensis (goldenrod found in close proximity within a typical diverse meadow community across topographic and environmental gradients. We then evaluated direct and indirect relationships among variables using Mantel path analysis and developed a network displaying abiotic and biotic interactions in this community. We found significant spatial autocorrelation among rockcress individuals, either because of common microhabitats as displayed by high density of individuals at lower elevation and high soil moisture area, or limited dispersal as shown by significant spatial autocorrelation of naturally occurring inbred lines, or a combination of both. Goldenrod and dandelion density around rockcress does not show any direct relationship with rockcress fecundity, possibly due to spatial segregation of resources. However, dandelion density around rockcress shows an indirect negative influence on rockcress fecundity via herbivory, indicating interspecific competition. Overall, we suggest that common microhabitat preference and limited dispersal are the main drivers for spatial distribution. However, intra-specific interactions and insect herbivory are the main drivers of rockcress performance in the meadow community.

Evaluation of stream ecological integrity using litter decomposition and benthic invertebrates

Energy Technology Data Exchange (ETDEWEB)

Castela, Jose [Departamento de Zoologia and IMAR-CIC, Universidade de Coimbra, Largo Marques de Pombal, 3004-517 Coimbra (Portugal)], E-mail: jcccastela@gmail.com; Ferreira, Veronica [Departamento de Zoologia and IMAR-CIC, Universidade de Coimbra, Largo Marques de Pombal, 3004-517 Coimbra (Portugal)], E-mail: veronica@ci.uc.pt; Graca, Manuel A.S. [Departamento de Zoologia and IMAR-CIC, Universidade de Coimbra, Largo Marques de Pombal, 3004-517 Coimbra (Portugal)], E-mail: mgraca@ci.uc.pt

2008-05-15

Biomonitoring programs to access the ecological integrity of freshwaters tend to rely exclusively on structural parameters. Here we evaluated stream ecological integrity using (a) benthic macroinvertebrate derived metrics and a biotic index as measures of structural integrity and (b) oak litter decomposition and associated fungal sporulation rates as measures of functional integrity. The study was done at four sites (S1, S2, S3 and S4) along a downstream increasing phosphorus and habitat degradation gradient in a small stream. The biotic index, invertebrate metrics, invertebrate and fungal communities' structure and sporulation rates discriminated upstream and downstream sites. Decomposition rates classified sites S4 and S2 as having a compromised ecosystem functioning. Although both functional and structural approaches gave the same results for the most impacted site (S4), they were complementary for moderately impacted sites (S2 and S3), and we therefore support the need for incorporating functional measures in evaluations of stream ecological integrity. - This study supports the need for incorporating functional measures in evaluations of stream ecological integrity.

Evaluation of stream ecological integrity using litter decomposition and benthic invertebrates

International Nuclear Information System (INIS)

Castela, Jose; Ferreira, Veronica; Graca, Manuel A.S.

2008-01-01

Biomonitoring programs to access the ecological integrity of freshwaters tend to rely exclusively on structural parameters. Here we evaluated stream ecological integrity using (a) benthic macroinvertebrate derived metrics and a biotic index as measures of structural integrity and (b) oak litter decomposition and associated fungal sporulation rates as measures of functional integrity. The study was done at four sites (S1, S2, S3 and S4) along a downstream increasing phosphorus and habitat degradation gradient in a small stream. The biotic index, invertebrate metrics, invertebrate and fungal communities' structure and sporulation rates discriminated upstream and downstream sites. Decomposition rates classified sites S4 and S2 as having a compromised ecosystem functioning. Although both functional and structural approaches gave the same results for the most impacted site (S4), they were complementary for moderately impacted sites (S2 and S3), and we therefore support the need for incorporating functional measures in evaluations of stream ecological integrity. - This study supports the need for incorporating functional measures in evaluations of stream ecological integrity

How do Humans interact with the Biotic Pump of South America?

Science.gov (United States)

Sharma, Ajar; Pande, Saket; Renata Cordeiro Ortigara, Angela; Uhlenbrook, Stefan

2017-04-01

The negative effects of the deforestation have been both advertised and down played. However, the effects are far more tangible than what they seem to be. It has been shown that the change in forest cover causes the rainfall patterns to change as the forests work as so-called Biotic Pumps. This changes the water availability in the area by modifying the water balance. Local water balances affect the changes that may take longer to be visible on the larger scales. The Amazon rain forest, one of the most bio-diverse areas worldwide, is an essential part of the biosphere of South America. However, there are clear links between deforestation carried out for agricultural purposes, specifically, Soybean and Sugarcane and the variability in global food prices. Here we analyse the anthropogenic actions that may influence the biotic pump. Variables such as volatility in commodity prices, risk taking capacities, land availability, government subsidies are used to drive the decision making of farmers. These variables are embedded in a lumped biotic pump model made for Brazil, utilizing data from different sources including MODIS, Centro de Previsão do Tempo e Estudos Climáticos (CPTEC), European Centre for Medium-Range Weather Forecasts (ECMWF). The biotic pump model essentially transports atmospheric moisture downwind, part of which falls as rain. The atmospheric moisture 'upwind' accounts for evaporation, incorporating land cover changes in response to land use decisions made by farmers and rainfall. The model is run for scenarios to demonstrate how rain downwind is affected by upwind land cover and provides first insights in to how much rain and productivity (agriculture) downwind is caused by the Amazonian rain forest upwind We then discuss the value of environmental conservation based on marginal productivity analysis, i.e., finding harmony between the conservation of rainforest and the economic growth of the country.

Integration of multiple, excess, backup, and expected covering models

OpenAIRE

M S Daskin; K Hogan; C ReVelle

1988-01-01

The concepts of multiple, excess, backup, and expected coverage are defined. Model formulations using these constructs are reviewed and contrasted to illustrate the relationships between them. Several new formulations are presented as is a new derivation of the expected covering model which indicates more clearly the relationship of the model to other multi-state covering models. An expected covering model with multiple time standards is also presented.

STRESS ECOLOGY IN FUCUS : ABIOTIC, BIOTIC AND GENETIC INTERACTIONS

NARCIS (Netherlands)

Wahl, Martin; Jormalainen, Veijo; Eriksson, Britas Klemens; Coyer, James A.; Molis, Markus; Schubert, Hendrik; Dethier, Megan; Karez, Rolf; Kruse, Inken; Lenz, Mark; Pearson, Gareth; Rohde, Sven; Wikstrom, Sofia A.; Olsen, Jeanine L.; Lesser, M

2011-01-01

Stress regimes defined as the synchronous or sequential action of abiotic and biotic stresses determine the performance and distribution of species. The natural patterns of stress to which species are more or less well adapted have recently started to shift and alter under the influence of global

Above- and Belowground Trophic Interactions on Creeping Thistle (Cirsium arvense) in High- and Low-Diversity Plant Communities: Potential for Biotic Resistance?

NARCIS (Netherlands)

Bezemer, T.M.; Graça, O.; Rousseau, P.; Van der Putten, W.H.

2004-01-01

The capacity of local communities to control introduced plants is called biotic resistance. Biotic resistance has been almost exclusively tested for plant competition and aboveground herbivores and pathogens, while neglecting root herbivores and soil pathogens. Here, we present biotic resistance by

Above- and Belowground Trophic Interactions on Creeping Thistle (Cirsium arvense) in High- and Low-Diversity Plant Communities: Potential for Biotic Resistance?

NARCIS (Netherlands)

Bezemer, T.M.; Graça, O.; Rousseau, P.; Putten, van der W.H.

2004-01-01

The capacity of local communities to control introduced plants is called biotic resistance. Biotic resistance has been almost exclusively tested for plant competition and above-ground herbivores and pathogens, while neglecting root herbivores and soil pathogens. Here, we present biotic resistance by

Disturbance metrics predict a wetland Vegetation Index of Biotic Integrity

Science.gov (United States)

Stapanian, Martin A.; Mack, John; Adams, Jean V.; Gara, Brian; Micacchion, Mick

2013-01-01

Indices of biological integrity of wetlands based on vascular plants (VIBIs) have been developed in many areas in the USA. Knowledge of the best predictors of VIBIs would enable management agencies to make better decisions regarding mitigation site selection and performance monitoring criteria. We use a novel statistical technique to develop predictive models for an established index of wetland vegetation integrity (Ohio VIBI), using as independent variables 20 indices and metrics of habitat quality, wetland disturbance, and buffer area land use from 149 wetlands in Ohio, USA. For emergent and forest wetlands, predictive models explained 61% and 54% of the variability, respectively, in Ohio VIBI scores. In both cases the most important predictor of Ohio VIBI score was a metric that assessed habitat alteration and development in the wetland. Of secondary importance as a predictor was a metric that assessed microtopography, interspersion, and quality of vegetation communities in the wetland. Metrics and indices assessing disturbance and land use of the buffer area were generally poor predictors of Ohio VIBI scores. Our results suggest that vegetation integrity of emergent and forest wetlands could be most directly enhanced by minimizing substrate and habitat disturbance within the wetland. Such efforts could include reducing or eliminating any practices that disturb the soil profile, such as nutrient enrichment from adjacent farm land, mowing, grazing, or cutting or removing woody plants.

QTLs for tolerance of drought and breeding for tolerance of abiotic and biotic stress: an integrated approach.

Directory of Open Access Journals (Sweden)

Shalabh Dixit

Full Text Available BACKGROUND: The coupling of biotic and abiotic stresses leads to high yield losses in rainfed rice (Oryza sativa L. growing areas. While several studies target these stresses independently, breeding strategies to combat multiple stresses seldom exist. This study reports an integrated strategy that combines QTL mapping and phenotypic selection to develop rice lines with high grain yield (GY under drought stress and non-stress conditions, and tolerance of rice blast. METHODOLOGY: A blast-tolerant BC2F3-derived population was developed from the cross of tropical japonica cultivar Moroberekan (blast- and drought-tolerant and high-yielding indica variety Swarna (blast- and drought-susceptible through phenotypic selection for blast tolerance at the BC2F2 generation. The population was studied for segregation distortion patterns and QTLs for GY under drought were identified along with study of epistatic interactions for the trait. RESULTS: Segregation distortion, in favour of Moroberekan, was observed at 50 of the 59 loci. Majority of these marker loci co-localized with known QTLs for blast tolerance or NBS-LRR disease resistance genes. Despite the presence of segregation distortion, high variation for DTF, PH and GY was observed and several QTLs were identified under drought stress and non-stress conditions for the three traits. Epistatic interactions were also detected for GY which explained a large proportion of phenotypic variance observed in the population. CONCLUSIONS: This strategy allowed us to identify QTLs for GY along with rapid development of high-yielding purelines tolerant to blast and drought with considerably reduced efforts. Apart from this, it also allowed us to study the effects of the selection cycle for blast tolerance. The developed lines were screened at IRRI and in the target environment, and drought and blast tolerant lines with high yield were identified. With tolerance to two major stresses and high yield potential, these

Biotic Iron Precipitation in Sand Filtration Systems by Gallionella ferruginea: Morphology and content of Exopolymers

DEFF Research Database (Denmark)

Søgaard, Erik Gydesen; Simonsen, Charlotte

conditions for principally biotic or abiotic iron precipitation is not well defined. An rH2 greater than 14 e.g. corresponding to an Eh a little above zero at slightly acidic pH is stated to be the best condition for biotic iron precipitation (Degremont, 1991). Abiotic iron precipitation is performed at a p...... are built with the purpose of biotic iron precipitation in order to reduce frequency of backwashing filtration systems. This is possibly due to the fact that biologically precipitated iron has a much denser structure than the corresponding abiotic precipitates (Søgaard et al. 2000). Both kinds of iron......-Peskir J. (2000) Conditions and rates of biotic and abiotic iron precipitation in selected Danish freshwater plants and microscopic analysis of precipitate morphology. Water Research, 34, 10, 2675-2682 Søgaard E.G., Aruna R., Abraham-Peskir, J. and Bender Koch, C. (2001) Conditions for iron precipitation...

Characterization and comparison of iron oxyhydroxide precipitates from biotic and abiotic groundwater treatments

DEFF Research Database (Denmark)

Arturi, Katarzyna R.; Bender Koch, Christian; Søgaard, Erik G.

2017-01-01

Removal of iron is an important step in groundwater treatment for drinking water production. It is performed to prevent organoleptic issues and clogging in water supply systems. Iron can be eliminated with a purely physico-chemical (abiotic) method or biotically with the help of iron......-oxidizing bacteria (FeOB). Each of the purification methods requires different operating conditions and results in formation of iron oxyhydroxide (FeOOH) precipitates. Knowledge about the differences in composition and properties of the biotic and abiotic precipitates is desirable from a technical, but also...

Biotic Interactions Shape the Ecological Distributions of Staphylococcus Species.

Science.gov (United States)

Kastman, Erik K; Kamelamela, Noelani; Norville, Josh W; Cosetta, Casey M; Dutton, Rachel J; Wolfe, Benjamin E

2016-10-18

Many metagenomic sequencing studies have observed the presence of closely related bacterial species or genotypes in the same microbiome. Previous attempts to explain these patterns of microdiversity have focused on the abiotic environment, but few have considered how biotic interactions could drive patterns of microbiome diversity. We dissected the patterns, processes, and mechanisms shaping the ecological distributions of three closely related Staphylococcus species in cheese rind biofilms. Paradoxically, the most abundant species (S. equorum) is the slowest colonizer and weakest competitor based on growth and competition assays in the laboratory. Through in vitro community reconstructions, we determined that biotic interactions with neighboring fungi help resolve this paradox. Species-specific stimulation of the poor competitor by fungi of the genus Scopulariopsis allows S. equorum to dominate communities in vitro as it does in situ Results of comparative genomic and transcriptomic experiments indicate that iron utilization pathways, including a homolog of the S. aureus staphyloferrin B siderophore operon pathway, are potential molecular mechanisms underlying Staphylococcus-Scopulariopsis interactions. Our integrated approach demonstrates that fungi can structure the ecological distributions of closely related bacterial species, and the data highlight the importance of bacterium-fungus interactions in attempts to design and manipulate microbiomes. Decades of culture-based studies and more recent metagenomic studies have demonstrated that bacterial species in agriculture, medicine, industry, and nature are unevenly distributed across time and space. The ecological processes and molecular mechanisms that shape these distributions are not well understood because it is challenging to connect in situ patterns of diversity with mechanistic in vitro studies in the laboratory. Using tractable cheese rind biofilms and a focus on coagulase-negative staphylococcus (CNS

Application of radiation processing to produce biotic elicitor for sugarcane in Vietnam

International Nuclear Information System (INIS)

Nguyen, Quoc Hien; Tran, Tich Canh; Truong, Thi Hanh; Vo, Thi Kim Lang; Dang, Van Phu; Cao, Anh Duong

2007-01-01

Sugarcane is the main raw material for production of sugar and ethanol. In Vietnam, it was reported in 1998 that the area for sugarcane growth was about 257,000ha. Up to now, the biotic elicitor, oligosaccharide has not been used for sugarcane yet. This study has been carried out to investigate the elicitation and the growth promotion effect of irradiated chitosan (oligochitosan) for sugarcane. The field test results indicated that alpha chitosan (shrimp shell) and beta chitosan (squid pen) samples with the content of water soluble oligomer of about 70% were the most effective. The disease ratio of sugarcane tree-trunk treated with irradiated chitosan before harvesting time decreased to 30-40% compared to non-treated one (100%). In addition, the productivity of sugarcane increased to about 20%. The combination of metal ion (Zn ++ , Cu ++ ) with oligochitosan did not show the synergic elicitation effect. The results revealed that biotic elicitor made from chitosan by radiation degradation method is very promising for field application not only for protection of disease infection but also for growth promotion of plants. It is believed that this biotic elicitor could be largely used for safe and sustainable development of agriculture. (author)

Can plant-natural enemy communication withstand disruption by biotic and abiotic factors?

Science.gov (United States)

Clavijo McCormick, Andrea

2016-12-01

The attraction of natural enemies towards herbivore-induced plant volatiles is a well-documented phenomenon. However, the majority of published studies are carried under optimal water and nutrient regimes and with just one herbivore. But what happens when additional levels of ecological complexity are added? Does the presence of a second herbivore, microorganisms, and abiotic stress interfere with plant-natural enemy communication? or is communication stable enough to withstand disruption by additional biotic and abiotic factors?Investigating the effects of these additional levels of ecological complexity is key to understanding the stability of tritrophic interactions in natural ecosystems and may aid to forecast the impact of environmental disturbances on these, especially in climate change scenarios, which are often associated with modifications in plant and arthropod species distribution and increased levels of abiotic stress.This review explores the literature on natural enemy attraction to herbivore-induced volatiles when, besides herbivory, plants are challenged by additional biotic and abiotic factors.The aim of this review was to establish the impact of different biotic and abiotic factors on plant-natural enemy communication and to highlight critical aspects to guide future research efforts.

Benefits of Biotic Pollination for Non-Timber Forest Products and Cultivated Plants

Directory of Open Access Journals (Sweden)

Rehel Shiny

2009-01-01

Full Text Available Biodiversity supplies multiple goods and services to society and is critical for the support of livelihoods across the globe. Many indigenous people depend upon non-timber forest products (NTFP and crops for a range of goods including food, medicine, fibre and construction materials. However, the dependency of these products on biotic pollination services is poorly understood. We used the biologically and culturally diverse Nilgiri Biosphere Reserve in India to characterise the types of NTFP and crop products of 213 plant species and asses their degree of dependency on animal pollination. We found that 80 per cent of all species benefited from animal pollination in their reproduction, and that 62 per cent of crop products and 40 per cent of NTFP benefited from biotic pollination in their production. Further we identified the likely pollinating taxa documented as responsible for the production of these products, mainly bees and other insects. A lower proportion of indigenous plant products (39 per cent benefited from biotic pollination than products from introduced plants (61 per cent. We conclude that pollinators play an important role in the livelihoods of people in this region.

River Quality Investigations, Part 1: Some Diversity and Biotic Indices.

Science.gov (United States)

Hewitt, G.

1991-01-01

The following indices for assessing river water quality are described: Shannon-Weiner Diversity Index, Sorenson Quotient of Similarity, Czekanowski's Index of Similarity, Trent Biotic Index, Chandler Score, and Biological Monitoring Working Party Score. Their advantages and disadvantages are outlined. (Author)

Legumes affect alpine tundra community composition via multiple biotic interactions

NARCIS (Netherlands)

Soudzilovskaia, N.A.; Aksenova, A.A.; Makarov, M.I.; Onipchenko, V.G.; Logvinenko, O.A.; Braak, ter C.J.F.; Cornelissen, J.H.C.

2012-01-01

The soil engineering function of legumes in natural ecosystems is paramount but associated solely with soil nitrogen (N) subsidies, ignoring concomitant biotic interactions such as competitive or inhibitory effects and exchange between mycorrhizas and rhizobia. We aim to (1) disentangle legume

Relevance of biotic pathways to the long-term regulation of nuclear-waste disposal. Topical report on reference western arid low-level sites

International Nuclear Information System (INIS)

McKenzie, D.H.; Cadwell, L.L.; Eberhardt, L.E.; Kennedy, W.E. Jr.; Peloquin, R.A.; Simmons, M.A.

1982-10-01

The purpose of the work reported here was to develop an order of magnitude estimate for the potential dose to man resulting from biotic transport mechanisms at a reference western arid low-level waste site. A description of the reference site is presented that includes the waste inventories, site characteristics and biological communities. Parameter values for biotic transport processes are based on data reported in current literature. Transport and exposure scenarios are developed for assessing biotic transport during 100 years following site closure. Calculations of radionuclide decay and waste container decomposition are made to estimate the quantities available for biotic transport. Dose to a man occupying the reference site following the 100 years of biotic transport are calculated. These dose estimates are compared to dose estimates for the intruder-agricultural scenario reported in the DEIS for 10 CFR 61 (NRC). Dose to man estimates as a result of biotic transport are estimated to be of the same order of magnitude as the dose resulting from the more commonly evaluated human intrusion scenario. The reported lack of potential importance of biotic transport at low-level waste sites in earlier assessment studies is not confirmed by the findings presented in this report. These results indicate that biotic transport has the potential to influence low-level waste site performance. Through biotic transport, radionuclides may be moved to locations where they can enter exposure pathways to man

A zone-specific fish-based biotic index as a management tool for the Zeeschelde estuary (Belgium).

Science.gov (United States)

Breine, Jan; Quataert, Paul; Stevens, Maarten; Ollevier, Frans; Volckaert, Filip A M; Van den Bergh, Ericia; Maes, Joachim

2010-07-01

Fish-based indices monitor changes in surface waters and are a valuable aid in communication by summarising complex information about the environment (Harrison and Whitfield, 2004). A zone-specific fish-based multimetric estuarine index of biotic integrity (Z-EBI) was developed based on a 13 year time series of fish surveys from the Zeeschelde estuary (Belgium). Sites were pre-classified using indicators of anthropogenic impact. Metrics showing a monotone response with pressure classes were selected for further analysis. Thresholds for the good ecological potential (GEP) were defined from references. A modified trisection was applied for the other thresholds. The Z-EBI is defined by the average of the metric scores calculated over a one year period and translated into an ecological quality ratio (EQR). The indices integrate structural and functional qualities of the estuarine fish communities. The Z-EBI performances were successfully validated for habitat degradation in the various habitat zones. Copyright 2010 Elsevier Ltd. All rights reserved.

Diagnosis of abiotic and biotic stress factors using the visible symptoms in foliage

International Nuclear Information System (INIS)

Vollenweider, P.; Guenthardt-Goerg, Madeleine S.

2005-01-01

Visible symptoms in the foliage of trees are recorded to monitor the effects of abiotic and biotic stress. Difficulties are reported in diagnosing the origin of stress. The present paper discusses several diagnostic criteria which are usable in different species for a better determination of the stress factor type. A new diagnosis scheme to differentiate between classes of abiotic and biotic stress factors is supplied. Abiotic stress generates gradients of symptoms. The symptom specificity is determined by the degree of interaction between the stress factor and plant defense system. Symptoms caused by abiotic stress and natural autumnal senescence can be morphologically different or undistinguishable according to the stress and plant species. With biotic stress, the class of parasitic is generally recognizable on the basis of the visible symptoms. Structurally and physiologically based explanations of the symptom morphology are still missing for many stress factors. - The morphology and distribution of visible stress symptoms in tree foliage provides diagnostic tools to identify plant defense responses and differentiate stress from natural senescence symptoms

Linking biotic homogenization to habitat type, invasiveness and growth form of naturalized alien plants in North America

Science.gov (United States)

Hong Qian; Qinfeng. Guo

2010-01-01

Aim Biotic homogenization is a growing phenomenon and has recently attracted much attention. Here, we analyse a large dataset of native and alien plants in North America to examine whether biotic homogenization is related to several ecological and biological attributes. Location North America (north of Mexico). Methods We assembled...

Hydrolysis and biotic transformation in water in the pesticide model

NARCIS (Netherlands)

Horst, ter M.M.S.; Beltman, W.H.J.; Adriaanse, P.I.; Mulder, H.M.

2017-01-01

The TOXSWA model has been extended with the functionality to simulate hydrolysis and biotic transformation in water. TOXSWA simulates the fate of pesticides in water bodies to calculate exposure calculations for aquatic organisms or sediment-dwelling organisms as part of the aquatic risk assessment

Relevance of biotic pathways to the long-term regulation of nuclear waste disposal. Phase I. Final report. Vol. 4

International Nuclear Information System (INIS)

McKenzie, D.H.; Cadwell, L.L.; Eberhardt, L.E.; Kennedy, W.E. Jr.; Peloquin, R.A.; Simmons, M.A.

1984-05-01

Licensing and regulation of commercial low-level waste (CLLW) burial facilities require that anticipated risks associated with burial sites be evaluated for the life of the facility. This work reviewed the existing capability to evaluate dose to man resulting from the potential redistribution of buried radionuclides by plants and animals that we have termed biotic transport. Through biotic transport, radionuclides can be moved to locations where they can enter exposure pathways to man. We found that predictive models currently in use did not address the long-term risks resulting from the cumulative transport of radionuclides. Although reports in the literature confirm that biotic transport phenomena are common, assessments routinely ignore the associated risks or dismiss them as insignificant without quantitative evaluation. To determine the potential impacts of biotic transport, we made order-of-magnitude estimates of the dose to man for biotic transport processes at reference arid and humid CLLW disposal sites. Estimated doses to site residents after assumed loss of institutional control were comparable to dose estimates for the intruder-agricultural scenario defined in the DEIS for 10 CFR 61 (NRC). The reported lack of potential importance of biotic transport at low-level waste sites in earlier assessment studies is not confirmed by order of magnitude estimates presented in this study. 17 references, 10 figures, 8 tables

Proposal for adaptive management to conserve biotic integrity in a regulated segment of the Tallapoosa River, Alabama, U.S.A

Science.gov (United States)

Irwin, Elise R.; Freeman, Mary C.

2002-01-01

Conserving river biota will require innovative approaches that foster and utilize scientific understanding of ecosystem responses to alternative river-management scenarios. We describe ecological and societal issues involved in flow management of a section of the Tallapoosa River (Alabama, U.S.A.) in which a species-rich native fauna is adversely affected by flow alteration by an upstream hydropower dam. We hypothesize that depleted Iow flows, flow instability and thermal alteration resulting from pulsed flow releases at the hydropower dam are most responsible for changes in the Tallapoosa River biota. However, existing data are insufficient to prescribe with certainty minimum flow levels or the frequency and duration of stable flow periods that would be necessary or sufficient to protect riverine biotic integrity. Rather than negotiate a specific change in the flow regime, we propose that stakeholders--including management agencies, the power utility, and river advocates--engage in a process of adaptive-flow management. This process would require that stakeholders (1) develop and agree to management objectives; (2) model hypothesized relations between dam operations and management objectives; (3) implement a change in dam operations; and (4) evaluate biological responses and other stakeholder benefits through an externally reviewed monitoring program. Models would be updated with monitoring data and stakeholders would agree to further modify flow regimes as necessary to achieve management objectives. A primary obstacle to adaptive management will be a perceived uncertainty of future costs for the power utility and other stakeholders. However, an adaptive, iterative approach offers the best opportunity for improving flow regimes for native biota while gaining information critical to guiding management decisions in other flow-regulated rivers.

Relevance of biotic pathways to the long-term regulation of nuclear waste disposal. A report on Tasks 1 and 2 of Phase I

International Nuclear Information System (INIS)

McKenzie, D.H.; Cadwell, L.L.; Cushing, C.E. Jr.; Harty, R.; Kennedy, W.E. Jr.; Simmons, M.A.; Soldat, J.K.; Swartzman, B.

1982-07-01

The purpose of the work reported here was to evaluate the relevance of biotic transport to the assessment of impacts and licensing of low-level waste disposal sites. Available computer models and their recent applications at low-level waste disposal sites are considered. Biotic transport mechanisms and processes for both terrestrial and aquatic systems are presented with examples from existing waste disposal sites. Following a proposed system for ranking radionuclides by their potential for biotic transport, recommendations for completing Phase I research are presented. To evaluate the long-term importance of biotic transport at low-level waste sites, scenarios for biotic pathways and mechanisms need to be developed. Scenarios should begin with a description of the waste form and should include a description of biotic processes and mechanisms, approximations of the magnitude of materials transported, and a linkage to processes or mechanisms in existing models. Once these scenarios are in place, existing models could be used to evaluate impacts resulting from biotic transport and to assess the relevance to site selection and licensing of low-level waste disposal sites

Exploring biotic vs. abiotic controls on syngenetic carbonate and clay mineral precipitation

Science.gov (United States)

Nascimento, Gabriela S.; McKenzie, Judith A.; Martinez Ruiz, Francisca; Bontognali, Tomaso R. R.; Vasconcelos, Crisogono

2016-04-01

A possible syngenetic relationship between carbonate and clay mineral precipitation has been reported for sedimentary rocks deposited in both lacustrine and marine sedimentary environments throughout the geological record. In particular, the mineral dolomite is often found associated with Mg-rich clays, such as stevensite. It is notable that this carbonate/clay association has been recorded in numerous samples taken from modern dolomite precipitating environments; for example, the Coorong lakes, South Australia, coastal sabkhas, Abu Dhabi, UAE and coastal hypersaline lagoons (Lagoa Vermelha and Brejo do Espinho) east of Rio de Janeiro, Brazil. An HRTEM study of samples from these three locations indicates a possible physical/chemical association between the Ca-dolomite and Mg-rich clays, demonstrating a probable co-precipitation. To test this hypothesis, we have conducted a series of biotic and abiotic laboratory experiments. If this syngenesis actually occurs in nature, what, if any, are the biogeochemical processes controlling these precipitation reactions? Our experiments were designed to determine the extent of the biotic versus abiotic component influencing the mineral precipitation and, in the case of a biotic influence, to understand the mechanism through which microorganisms might mediate the formation of clay minerals. The experiments were carried out in the Geomicrobiology Laboratory of ETH Zürich using cultures of living microbes and artificial organic compounds that simulate functional groups present in natural biofilms formed under both aerobic and anaerobic conditions. In addition, pure inorganic experiments were designed to understand possible physico-chemical conditions for diagenetic processes that could induce dissolution of Mg-carbonates and precipitation of Mg-rich clays. Our results show a remarkable biotic influence during the formation of clay minerals. Specifically, extracellular polymeric substances (EPS), released by microbes in their

A cosmopolitan late Ediacaran biotic assemblage: new fossils from Nevada and Namibia support a global biostratigraphic link

Science.gov (United States)

Smith, E. F.; Nelson, L. L.; Tweedt, S. M.; Zeng, H.; Workman, Jeremiah B.

2017-01-01

Owing to the lack of temporally well-constrained Ediacaran fossil localities containing overlapping biotic assemblages, it has remained uncertain if the latest Ediacaran (ca 550–541 Ma) assemblages reflect systematic biological turnover or environmental, taphonomic or biogeographic biases. Here, we report new latest Ediacaran fossil discoveries from the lower member of the Wood Canyon Formation in Nye County, Nevada, including the first figured reports of erniettomorphs, Gaojiashania, Conotubus and other problematic fossils. The fossils are spectacularly preserved in three taphonomic windows and occur in greater than 11 stratigraphic horizons, all of which are below the first appearance of Treptichnus pedum and the nadir of a large negative δ13C excursion that is a chemostratigraphic marker of the Ediacaran–Cambrian boundary. The co-occurrence of morphologically diverse tubular fossils and erniettomorphs in Nevada provides a biostratigraphic link among latest Ediacaran fossil localities globally. Integrated with a new report of Gaojiashania from Namibia, previous fossil reports and existing age constraints, these finds demonstrate a distinctive late Ediacaran fossil assemblage comprising at least two groups of macroscopic organisms with dissimilar body plans that ecologically and temporally overlapped for at least 6 Myr at the close of the Ediacaran Period. This cosmopolitan biotic assemblage disappeared from the fossil record at the end of the Ediacaran Period, prior to the Cambrian radiation.

Induced Systemic Tolerance to Multiple Stresses Including Biotic and Abiotic Factors by Rhizobacteria

Directory of Open Access Journals (Sweden)

Sung-Je Yoo

2017-06-01

Full Text Available Recently, global warming and drastic climate change are the greatest threat to the world. The climate change can affect plant productivity by reducing plant adaptation to diverse environments including frequent high temperature; worsen drought condition and increased pathogen transmission and infection. Plants have to survive in this condition with a variety of biotic (pathogen/pest attack and abiotic stress (salt, high/low temperature, drought. Plants can interact with beneficial microbes including plant growth-promoting rhizobacteria, which help plant mitigate biotic and abiotic stress. This overview presents that rhizobacteria plays an important role in induced systemic resistance (ISR to biotic stress or induced systemic tolerance (IST to abiotic stress condition; bacterial determinants related to ISR and/or IST. In addition, we describe effects of rhizobacteria on defense/tolerance related signal pathway in plants. We also review recent information including plant resistance or tolerance against multiple stresses (bioticabiotic. We desire that this review contribute to expand understanding and knowledge on the microbial application in a constantly varying agroecosystem, and suggest beneficial microbes as one of alternative environment-friendly application to alleviate multiple stresses.

Separating the role of biotic interactions and climate in determining adaptive response of plants to climate change.

Science.gov (United States)

Tomiolo, Sara; Van der Putten, Wim H; Tielbörger, Katja

2015-05-01

Altered rainfall regimes will greatly affect the response of plant species to climate change. However, little is known about how direct effects of changing precipitation on plant performance may depend on other abiotic factors and biotic interactions. We used reciprocal transplants between climatically very different sites with simultaneous manipulation of soil, plant population origin, and neighbor conditions to evaluate local adaptation and possible adaptive response of four Eastern Mediterranean annual plant species to climate change. The effect of site on plant performance was negligible, but soil origin had a strong effect on fecundity, most likely due to differential water retaining ability. Competition by neighbors strongly reduced fitness. We separated the effects of the abiotic and biotic soil properties on plant performance by repeating the field experiment in a greenhouse under homogenous environmental conditions and including a soil biota manipulation treatment. As in the field, plant performance differed among soil origins and neighbor treatments. Moreover, we found plant species-specific responses to soil biota that may be best explained by the differential sensitivity to negative and positive soil biota effects. Overall, under the conditions of our experiment with two contrasting sites, biotic interactions had a strong effect on plant fitness that interacted with and eventually overrode climate. Because climate and biotic interactions covary, reciprocal transplants and climate gradient studies should consider soil biotic interactions and abiotic conditions when evaluating climate change effects on plant performance.

Regulation of Translation Initiation under Biotic and Abiotic Stresses

Directory of Open Access Journals (Sweden)

Ana B. Castro-Sanz

2013-02-01

Full Text Available Plants have developed versatile strategies to deal with the great variety of challenging conditions they are exposed to. Among them, the regulation of translation is a common target to finely modulate gene expression both under biotic and abiotic stress situations. Upon environmental challenges, translation is regulated to reduce the consumption of energy and to selectively synthesize proteins involved in the proper establishment of the tolerance response. In the case of viral infections, the situation is more complex, as viruses have evolved unconventional mechanisms to regulate translation in order to ensure the production of the viral encoded proteins using the plant machinery. Although the final purpose is different, in some cases, both plants and viruses share common mechanisms to modulate translation. In others, the mechanisms leading to the control of translation are viral- or stress-specific. In this paper, we review the different mechanisms involved in the regulation of translation initiation under virus infection and under environmental stress in plants. In addition, we describe the main features within the viral RNAs and the cellular mRNAs that promote their selective translation in plants undergoing biotic and abiotic stress situations.

Hydrologic, abiotic and biotic interactions: plant density, windspeed, leaf size and groundwater all affect oak water use efficiency

Science.gov (United States)

Darin J. Law; Deborah M. Finch

2011-01-01

Plant water use in drylands can be complex due to variation in hydrologic, abiotic and biotic factors, particularly near ephemeral or intermittent streams. Plant use of groundwater may be important but is usually uncertain. Disturbances like fire contribute to complex spatiotemporal heterogeneity. Improved understanding of how such hydrologic, abiotic, and biotic...

Elucidating the Role of Carbon Sources on Abiotic and Biotic Release of Arsenic into Cambodian Aquifers

Science.gov (United States)

Koeneke, M.

2017-12-01

Arsenic (As) is a naturally occurring contaminant in Cambodia that has been contaminating well-water sources of millions of people. Commonly, studies look into the biotic factors that cause the arsenic to be released from aquifer sediments to groundwater. However, abiotic release of As from sediments, though little studied, may also play key roles in As contamination of well water. The goal of this research is to quantitatively compare organic-carbon mediated abiotic and biotic release of arsenic from sediments to groundwater. Batch anaerobic incubation experiments under abiotic (sodium azide used to immobilize microbes) and biotic conditions were conducted using Cambodian aquifer sediments, four different organic carbon sources (sodium lactate, sodium citrate, sodium oxalate, and humic acid), and six different carbon concentrations (0, 1, 2.5, 5, 10, 25mg C/L). Dissolved arsenic, iron(Fe), and manganese(Mn) concentrations in the treatments were measured 112 days . In addition, sediment and solution carbon solution was measured . Collectively, these show how different carbon sources, different carbon concentrations, and how abiotic and biotic factors impact the release of arsenic from Cambodian sediments into aquifers. Overall, an introduction of organic carbon to the soil increases the amount of As released from the sediment. The biotic + abiotic and abiotic conditions seemed to play a minimal role in the amount of As released. Dissolved species analysis showed us that 100% of the As was As(V), Our ICP-MS results vary due to the heterogeneity of samples, but when high levels are Fe are seen in solution, we also see high levels of As. We also see higher As concentrations when there is a smaller amount of Mn in solution.

Relevance of biotic pathways to the long-term regulation of nuclear waste disposal. Topical report on reference eastern humid low-level sites

International Nuclear Information System (INIS)

McKenzie, D.H.; Cadwell, L.L.; Eberhardt, L.E.; Kennedy, W.E. Jr.; Peloquin, R.A.; Simmons, M.A.

1983-01-01

The purpose of the work reported here was to develop an order-of-magnitude estimate for the potential dose to man resulting from biotic transport mechanisms at a humid reference low-level waste site in the eastern US. A description of the reference site is presented that includes the waste inventories, site characteristics and biological communites. Parameter values for biotic transport processes are based on data reported in current literature. Transport and exposure scenarios are developed for assessing biotic transport during 500 years following site closure. Calculations of radionuclide decay and waste container decomposition are made to estimate the quantities available for biotic transport. Doses to man are calculated for the biological transport of radionucludes at the reference site after loss of institutional control. These dose estimates are compared to dose estimates we calculated for the intruder-agricultural scenarios reported in the DEIS for 10 CFR 61 (NRC). Dose to man estimates as a result of cumulative biotic transport are calculated to be of the same order-of-magnitude as the dose resulting from the more commonly evaluated human intrusion scenario. The reported lack of potential importance of biotic transport at low-level waste sites in earlier assessment studies is not confirmed by findings presented in this report. Through biotic transport, radionuclides can be moved to locations where they can enter exposure pathways to man

Cross-tolerance to biotic and abiotic stresses in plants: a focus on resistance to aphid infestation.

Science.gov (United States)

Foyer, Christine H; Rasool, Brwa; Davey, Jack W; Hancock, Robert D

2016-03-01

Plants co-evolved with an enormous variety of microbial pathogens and insect herbivores under daily and seasonal variations in abiotic environmental conditions. Hence, plant cells display a high capacity to respond to diverse stresses through a flexible and finely balanced response network that involves components such as reduction-oxidation (redox) signalling pathways, stress hormones and growth regulators, as well as calcium and protein kinase cascades. Biotic and abiotic stress responses use common signals, pathways and triggers leading to cross-tolerance phenomena, whereby exposure to one type of stress can activate plant responses that facilitate tolerance to several different types of stress. While the acclimation mechanisms and adaptive responses that facilitate responses to single biotic and abiotic stresses have been extensively characterized, relatively little information is available on the dynamic aspects of combined biotic/abiotic stress response. In this review, we consider how the abiotic environment influences plant responses to attack by phloem-feeding aphids. Unravelling the signalling cascades that underpin cross-tolerance to biotic and abiotic stresses will allow the identification of new targets for increasing environmental resilience in crops. © The Author 2016. Published by Oxford University Press on behalf of the Society for Experimental Biology. All rights reserved. For permissions, please email: journals.permissions@oup.com.

Environmental conditions and biotic communities in Foz de Almargem and Salgados coastal lagoons, Algarve (South Portugal)

OpenAIRE

Coelho, Susana Isabel Eusébio

2013-01-01

The present study intended to compare environmental conditions and biotic communities of two choked coastal lagoons located in the Algarve region, Foz de Almargem and Salgados, with the purpose of evaluating the effects of organic pollution from wastewater discharges in water quality and biotic communities from different levels of the food chain, namely phytoplankton and benthic macroinvertebrates. Both lagoons were seasonally connected to the sea, but most of the year they were isolated r...

Ecosystem development in roadside grasslands: biotic control, plant–soil interactions and dispersal limitations

Science.gov (United States)

García-Palacios, Pablo; Bowker, Matthew A.; Maestre, Fernando T.; Soliveres, Santiago; Valladares, Fernando; Papadopoulos, Jorge; Escudero, Adrián

2015-01-01

Roadside grasslands undergoing secondary succession are abundant, and represent ecologically meaningful examples of novel, human-created ecosystems. Interactions between plant and soil communities (hereafter plant–soil interactions) are of major importance in understanding the role of biotic control in ecosystem functioning, but little is known about these links in the context of ecosystem restoration and succession. The assessment of the key biotic communities and interactions driving ecosystem development will help practitioners to better allocate the limited resources devoted to roadside grassland restoration. We surveyed roadside grasslands from three successional stages (0–2, 7–9 and > 20 years) in two Mediterranean regions of Spain. Structural equation modeling was used to evaluate how interactions between plants, biological soil crusts [BSCs], and soil microbial functional diversity [soil microorganisms] affect indicators of ecosystem development and restoration: plant similarity to the reference ecosystem, erosion control and soil C storage and N accumulation. Changes in plant community composition along the successional gradient exerted the strongest influence on these indicators. High BSC cover was associated with high soil stability, and high soil microbial functional diversity from late-successional stages was associated with high soil fertility. Contrary to our expectations, the indirect effects of plants, mediated by either BSCs or soil microorganisms, were very weak in both regions, suggesting a minor role for plant–soil interactions upon ecosystem development indicators over long periods. Our results suggest that natural vegetation dynamics effectively improved ecosystem development within a time frame of 20 years in the grasslands evaluated. They also indicate that this time could be shortened if management actions focus on: 1) maintain well-conserved natural areas close to roadsides to enhance plant compositional changes towards late

Ecosystem development in roadside grasslands: Biotic control, plant-soil interactions, and dispersal limitations

Science.gov (United States)

Garcia-Palacios, P.; Bowker, M.A.; Maestre, F.T.; Soliveres, S.; Valladares, F.; Papadopoulos, J.; Escudero, A.

2011-01-01

Roadside grasslands undergoing secondary succession are abundant, and represent ecologically meaningful examples of novel, human-created ecosystems. Interactions between plant and soil communities (hereafter plant-soil interactions) are of major importance in understanding the role of biotic control in ecosystem functioning, but little is known about these links in the context of ecosystem restoration and succession. The assessment of the key biotic communities and interactions driving ecosystem development will help practitioners to better allocate the limited resources devoted to roadside grassland restoration. We surveyed roadside grasslands from three successional stages (0-2, 7-9, and > 20 years) in two Mediterranean regions of Spain. Structural equation modeling was used to evaluate how interactions between plants, biological soil crusts (BSCs), and soil microbial functional diversity (soil microorganisms) affect indicators of ecosystem development and restoration: plant similarity to the reference ecosystem, erosion control, and soil C storage and N accumulation. Changes in plant community composition along the successional gradient exerted the strongest influence on these indicators. High BSC cover was associated with high soil stability, and high soil microbial functional diversity from late-successional stages was associated with high soil fertility. Contrary to our expectations, the indirect effects of plants, mediated by either BSCs or soil microorganisms, were very weak in both regions, suggesting a minor role for plant-soil interactions upon ecosystem development indicators over long periods. Our results suggest that natural vegetation dynamics effectively improved ecosystem development within a time frame of 20 years in the grasslands evaluated. They also indicate that this time could be shortened if management actions focus on: (1) maintaining wellconserved natural areas close to roadsides to enhance plant compositional changes towards late

Investigation of road salts and biotic stressors on freshwater wetland communities.

Science.gov (United States)

Jones, Devin K; Mattes, Brian M; Hintz, William D; Schuler, Matthew S; Stoler, Aaron B; Lind, Lovisa A; Cooper, Reilly O; Relyea, Rick A

2017-02-01

The application of road deicing salts has led to the salinization of freshwater ecosystems in northern regions worldwide. Increased chloride concentrations in lakes, streams, ponds, and wetlands may negatively affect freshwater biota, potentially threatening ecosystem services. In an effort to reduce the effects of road salt, operators have increased the use of salt alternatives, yet we lack an understanding of how these deicers affect aquatic communities. We examined the direct and indirect effects of the most commonly used road salt (NaCl) and a proprietary salt mixture (NaCl, KCl, MgCl 2 ), at three environmentally relevant concentrations (150, 470, and 780 mg Cl - /L) on freshwater wetland communities in combination with one of three biotic stressors (control, predator cues, and competitors). The communities contained periphyton, phytoplankton, zooplankton, and two tadpole species (American toads, Anaxyrus americanus; wood frogs, Lithobates sylvaticus). Overall, we found the two road salts did not interact with the natural stressors. Both salts decreased pH and reduced zooplankton abundance. The strong decrease in zooplankton abundance in the highest NaCl concentration caused a trophic cascade that resulted in increased phytoplankton abundance. The highest NaCl concentration also reduced toad activity. For the biotic stressors, predatory stress decreased whereas competitive stress increased the activity of both tadpole species. Wood frog survival, time to metamorphosis, and mass at metamorphosis all decreased under competitive stress whereas toad time to metamorphosis increased and mass at metamorphosis decreased. Road salts and biotic stressors can both affect freshwater communities, but their effects are not interactive. Copyright © 2016 Elsevier Ltd. All rights reserved.

Relevance of biotic pathways to the long-term regulation of nuclear waste disposal: Phase 2, Final report

International Nuclear Information System (INIS)

McKenzie, D.H.; Cadwell, L.L.; Kennedy, W.E. Jr.; Prohammer, L.A.; Simmons, M.A.

1986-11-01

The results reported here establish the relevance and propose a method for including biotic transport in the assessment and licensing process for commercial low-level waste disposal sites. Earlier work identified the biotic transport mechanisms and process scenarios linking biotic transport with dose to man, and developed models for assessment of impacts. Model modification and improvement efforts in enhancing the ability to represent soil erosion and soil transport within the trench cover. Two alternative hypotheses on plant root uptake were incorporated into the model to represent transport of radionuclides by roots that penetrate the buried waste. Enhancements were also made to the scenario for future site intruder activities. Representation of waste package decomposition in the model was confirmed as the best available alternative. Results from sensitivity analyses indicate that additional information is needed to evaluate the alternative hypotheses for plant root uptake of buried wastes. Site-specific evaluations of the contribution from biotic transport to the potential dose to man establish the relevance in the assessment process. The BIOPORT/MAXI1 computer software package is proposed for dose assessments of commercial low-level waste disposal sites

Relevance of biotic pathways to the long-term regulation of nuclear waste disposal: Phase 2, Final report

Energy Technology Data Exchange (ETDEWEB)

McKenzie, D.H.; Cadwell, L.L.; Kennedy, W.E. Jr.; Prohammer, L.A.; Simmons, M.A.

1986-11-01

The results reported here establish the relevance and propose a method for including biotic transport in the assessment and licensing process for commercial low-level waste disposal sites. Earlier work identified the biotic transport mechanisms and process scenarios linking biotic transport with dose to man, and developed models for assessment of impacts. Model modification and improvement efforts in enhancing the ability to represent soil erosion and soil transport within the trench cover. Two alternative hypotheses on plant root uptake were incorporated into the model to represent transport of radionuclides by roots that penetrate the buried waste. Enhancements were also made to the scenario for future site intruder activities. Representation of waste package decomposition in the model was confirmed as the best available alternative. Results from sensitivity analyses indicate that additional information is needed to evaluate the alternative hypotheses for plant root uptake of buried wastes. Site-specific evaluations of the contribution from biotic transport to the potential dose to man establish the relevance in the assessment process. The BIOPORT/MAXI1 computer software package is proposed for dose assessments of commercial low-level waste disposal sites.

Biotic development comparisons of a wetland constructed to treat mine water drainage with a natural wetland system

International Nuclear Information System (INIS)

Webster, H.J.; Hummer, J.W.; Lacki, M.J.

1994-01-01

Using 5-yr of baseline data from a constructed wetland, the authors compared the biotic changes in this wetland to conditions in a natural wetland to determine if biotic development patterns were similar. The constructed wetland was built in 1985 to treat a coal mine discharge and was planted with broadleaf cattail (Typha latifolia) within the three-cell, 0.26 ha wetland. Species richness in permanent quadrants of the constructed wetland declined over the study period, while cattail coverage increased. Plant species composition diversified at the edges, with several species becoming established. The constructed wetland deepened and expanded slightly in area coverage during the study period. The constructed wetland supported herptofaunal communities that appeared more stable through time than those of the natural wetland and sustained a rudimentary food chain dependent upon autotrophic algal populations. Despite fundamental differences in substrate base, morphology, and water flow patterns, biotic trends for the constructed wetland coincided with succession-like patterns at the natural wetland. They suggest that further shifts in the biotic composition of the constructed wetland are likely, but the system should continue to persist if primary production meets or exceeds the microbial metabolic requirements necessary to treat mine drainage

Local biotic adaptation of trees and shrubs to plant neighbors

Science.gov (United States)

Grady, Kevin C.; Wood, Troy E.; Kolb, Thomas E.; Hersch-Green, Erika; Shuster, Stephen M.; Gehring, Catherine A.; Hart, Stephen C.; Allan, Gerard J.; Whitham, Thomas G.

2017-01-01

Natural selection as a result of plant–plant interactions can lead to local biotic adaptation. This may occur where species frequently interact and compete intensely for resources limiting growth, survival, and reproduction. Selection is demonstrated by comparing a genotype interacting with con- or hetero-specific sympatric neighbor genotypes with a shared site-level history (derived from the same source location), to the same genotype interacting with foreign neighbor genotypes (from different sources). Better genotype performance in sympatric than allopatric neighborhoods provides evidence of local biotic adaptation. This pattern might be explained by selection to avoid competition by shifting resource niches (differentiation) or by interactions benefitting one or more members (facilitation). We tested for local biotic adaptation among two riparian trees, Populus fremontii and Salix gooddingii, and the shrub Salix exigua by transplanting replicated genotypes from multiple source locations to a 17 000 tree common garden with sympatric and allopatric treatments along the Colorado River in California. Three major patterns were observed: 1) across species, 62 of 88 genotypes grew faster with sympatric neighbors than allopatric neighbors; 2) these growth rates, on an individual tree basis, were 44, 15 and 33% higher in sympatric than allopatric treatments for P. fremontii, S. exigua and S. gooddingii, respectively, and; 3) survivorship was higher in sympatric treatments for P. fremontiiand S. exigua. These results support the view that fitness of foundation species supporting diverse communities and dominating ecosystem processes is determined by adaptive interactions among multiple plant species with the outcome that performance depends on the genetic identity of plant neighbors. The occurrence of evolution in a plant-community context for trees and shrubs builds on ecological evolutionary research that has demonstrated co-evolution among herbaceous taxa, and

Citrus flush shoot ontogeny modulates biotic potential of Diaphorina citri.

Science.gov (United States)

Cifuentes-Arenas, Juan Camilo; de Goes, António; de Miranda, Marcelo Pedreira; Beattie, George Andrew Charles; Lopes, Silvio Aparecido

2018-01-01

The biology and behaviour of the psyllid Diaphorina citri Kuwayama (Hemiptera: Sternorrhyncha: Liviidae), the major insect vector of bacteria associated with huanglongbing, have been extensively studied with respect to host preferences, thermal requirements, and responses to visual and chemical volatile stimuli. However, development of the psyllid in relation to the ontogeny of immature citrus flush growth has not been clearly defined or illustrated. Such information is important for determining the timing and frequency of measures used to minimize populations of the psyllid in orchards and spread of HLB. Our objective was to study how flush ontogeny influences the biotic potential of the psyllid. We divided citrus flush growth into six stages within four developmental phases: emergence (V1), development (V2 and V3), maturation (V4 and V5), and dormancy (V6). Diaphorina citri oviposition and nymph development were assessed on all flush stages in a temperature controlled room, and in a screen-house in which ambient temperatures varied. Our results show that biotic potential of Diaphorina citri is not a matter of the size or the age of the flushes (days after budbreak), but the developmental stage within its ontogeny. Females laid eggs on flush V1 to V5 only, with the time needed to commence oviposition increasing with the increasing in flush age. Stages V1, V2 and V3 were most suitable for oviposition, nymph survival and development, and adult emergence, which showed evidence of protandry. Flush shoots at emerging and developmental phases should be the focus of any chemical or biological control strategy to reduce the biotic potential of D. citri, to protect citrus tree from Liberibacter infection and to minimize HLB dissemination.

Ecosystem services in grassland associated with biotic and abiotic soil parameters

NARCIS (Netherlands)

Eekeren, van N.J.M.; Boer, de Herman; Hanegraaf, M.C.; Bokhorst, J.; Nierop, D.; Bloem, J.; Schouten, T.; Goede, de R.G.M.; Brussaard, L.

2010-01-01

Biotic soil parameters have so far seldom played a role in practical soil assessment and management of grasslands. However, the ongoing reduction of external inputs in agriculture would imply an increasing reliance on ecosystem self-regulating processes. Since soil biota play an important role in

Impacts of Professional Development in Integrated STEM Education on Teacher Self-Efficacy, Outcome Expectancy, and Stem Career Awareness

Science.gov (United States)

Knowles, J. Geoff

This research analyzed the effects of teacher professional development and lesson implementation in integrated Science, Technology, Engineering, and Math (STEM) on: 1.) Teacher self-efficacy and their confidence to teach specific STEM subjects; 2.) Teaching outcome expectancy beliefs concerning the impact of actions by teachers on student learning; and 3.) Teacher awareness of STEM careers. High school science and technology education teachers participating in the Teachers and Researchers Advancing Integrated Lessons in STEM (TRAILS) project experimental group attended a ten-day summer professional development institute designed to educate teachers in using an integrated STEM education model to implement integrated STEM lessons. The research design utilized a quasi-experimental nonequivalent comparison group design that incorporated an experimental group and an untreated comparison group with both pretest, posttest, and delayed posttest assessments on non-randomized participants. Teacher self-efficacy has been identified as a key factor in effective teaching and student learning, and teacher awareness of STEM careers impacts students as they consider career choices. The T-STEM Survey for teachers was given for the pretest and posttest assessments to measure attitudes and beliefs toward the specific constructs of this study. Significant effects of the TRAILS professional development were found in the teacher group (experimental or comparison) and teacher subject (technology or science) in pretest and posttest scores using cumulative link models for the constructs of teacher self-efficacy and beliefs to teach STEM subjects, teacher outcome expectancy beliefs, and teacher awareness of STEM careers. Effect sizes ranged from small to large varying by construct and assessment time. Highly significant p-values and effect sizes revealed impacts on science teachers were greater when teacher subject groups were analyzed separately.

Stable carbon isotope analysis to distinguish biotic and abiotic degradation of 1,1,1-trichloroethane in groundwater sediments

DEFF Research Database (Denmark)

Broholm, Mette Martina; Hunkeler, Daniel; Tuxen, Nina

2014-01-01

not appear to be reductive dechlorination via 1,1-DCA. In the biotic microcosms, the degradation of 1,1,1-TCA occurred under iron and sulfate reducing conditions. Biotic reduction of iron and sulfate likely resulted in formation of FeS, which can abiotically degrade 1,1,1-TCA. Hence, abiotic degradation of 1...

The application of biotic elicitor on Artemisia annua L. to increase artemisinin content

Science.gov (United States)

Darwati, I.; Manohara, D.; Rohimatun; Nurhayati, H.

2018-01-01

Artemisinin-based Combination Therapy (ACT) has been recommended by WHO as an alternative to treat malaria overcoming drug resistance. The secondary metabolic products in plants, including artemisinin, can be increased by utilizing biotic elicitor from fungi. The research was conducted in Gunung Putri Research Installation, Cipanas, West Java from 2010 to 2011. Phytophthora sp. from eggplant and Colletotrichum sp. from Artemisia annua were applied as biotic elicitor. The types of biotic elicitor applied to the plants were 1) the medium of potato dextrose broth were inoculated with fungi and harvested after 10 days (filtrate), 2) powdery mycelium of both fungi. There were 16 treatments: control negative, control positive (uninoculated medium) 1%, 2%, 3% (v/v)], Phytophthora sp. filtrate [1, 2% and 3% (v/v)], Colletotrichum sp. filtrate [1, 2% and 3% (v/v)], Phytophthora sp. mycelium [1%, 2% and 3% (w/v)], Colletotrichum sp mycelium [1%, 2% and 3% (w/v)]. The elicitor application increased plant production by 26.21% and artemisinin yield by 72% compared to control. Furthermore, the artemisinin production of the plants treated with medium inoculated with 2% filtrate of Phytophthora sp (FP2) (25.19 kg/ha) and 1% powdery mycelium of Colletotrichum sp (MC1) (26.42 kg/ha) were higher than control (K) (11.17 kg/ha).

White-tailed deer are a biotic filter during community assembly, reducing species and phylogenetic diversity.

Science.gov (United States)

Begley-Miller, Danielle R; Hipp, Andrew L; Brown, Bethany H; Hahn, Marlene; Rooney, Thomas P

2014-06-09

Community assembly entails a filtering process, where species found in a local community are those that can pass through environmental (abiotic) and biotic filters and successfully compete. Previous research has demonstrated the ability of white-tailed deer (Odocoileus virginianus) to reduce species diversity and favour browse-tolerant plant communities. In this study, we expand on our previous work by investigating deer as a possible biotic filter altering local plant community assembly. We used replicated 23-year-old deer exclosures to experimentally assess the effects of deer on species diversity (H'), richness (SR), phylogenetic community structure and phylogenetic diversity in paired browsed (control) and unbrowsed (exclosed) plots. Additionally, we developed a deer-browsing susceptibility index (DBSI) to assess the vulnerability of local species to deer. Deer browsing caused a 12 % reduction in H' and 17 % reduction in SR, consistent with previous studies. Furthermore, browsing reduced phylogenetic diversity by 63 %, causing significant phylogenetic clustering. Overall, graminoids were the least vulnerable to deer browsing based on DBSI calculations. These findings demonstrate that deer are a significant driver of plant community assembly due to their role as a selective browser, or more generally, as a biotic filter. This study highlights the importance of knowledge about the plant tree of life in assessing the effects of biotic filters on plant communities. Application of such knowledge has considerable potential to advance our understanding of plant community assembly. Published by Oxford University Press on behalf of the Annals of Botany Company.

Biotic diversity interfaces with urbanization in the Lake Tahoe basin

Science.gov (United States)

Patricia N. Manley; Dennis D. Murphy; Lori A. Campbell; Kirsten E. Heckmann; Susan Merideth; Sean A. Parks; Monte P. Sanford; Matthew D. Schlesinger

2006-01-01

In the Lake Tahoe Basin, the retention of native ecosystems within urban areas may greatly enhance the landscape’s ability to maintain biotic diversity. Our study of plant, invertebrate and vertebrate species showed that many native species were present in remnant forest stands in developed areas; however, their richness and abundance declined in association with...

Expected value analysis for integrated supplier selection and inventory control of multi-product inventory system with fuzzy cost

Science.gov (United States)

Sutrisno, Widowati, Tjahjana, R. Heru

2017-12-01

The future cost in many industrial problem is obviously uncertain. Then a mathematical analysis for a problem with uncertain cost is needed. In this article, we deals with the fuzzy expected value analysis to solve an integrated supplier selection and supplier selection problem with uncertain cost where the costs uncertainty is approached by a fuzzy variable. We formulate the mathematical model of the problems fuzzy expected value based quadratic optimization with total cost objective function and solve it by using expected value based fuzzy programming. From the numerical examples result performed by the authors, the supplier selection problem was solved i.e. the optimal supplier was selected for each time period where the optimal product volume of all product that should be purchased from each supplier for each time period was determined and the product stock level was controlled as decided by the authors i.e. it was followed the given reference level.

Abiotic and biotic drivers of biomass change in a Neotropical forest

NARCIS (Netherlands)

Sande, van der M.T.; Pena Claros, M.; Ascarrunz, Nataly; Arets, E.J.M.M.; Licona, J.C.; Toledo, Marisol; Poorter, L.

2017-01-01

Summary
1. Tropical fores ts play an important role in the global carbon cycle, but the drivers of net forest biomass change (i.e. net carbon sequestration) are poorly understood. Here, we evaluate how abiotic factors (soil co nditions and disturbance) and biotic factors (forest structure,

Identification of Arabidopsis candidate genes in response to biotic and abiotic stresses using comparative microarrays.

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Arjun Sham

Full Text Available Plants have evolved with intricate mechanisms to cope with multiple environmental stresses. To adapt with biotic and abiotic stresses, plant responses involve changes at the cellular and molecular levels. The current study was designed to investigate the effects of combinations of different environmental stresses on the transcriptome level of Arabidopsis genome using public microarray databases. We investigated the role of cyclopentenones in mediating plant responses to environmental stress through TGA (TGACG motif-binding factor transcription factor, independently from jasmonic acid. Candidate genes were identified by comparing plants inoculated with Botrytis cinerea or treated with heat, salt or osmotic stress with non-inoculated or non-treated tissues. About 2.5% heat-, 19% salinity- and 41% osmotic stress-induced genes were commonly upregulated by B. cinerea-treatment; and 7.6%, 19% and 48% of genes were commonly downregulated by B. cinerea-treatment, respectively. Our results indicate that plant responses to biotic and abiotic stresses are mediated by several common regulatory genes. Comparisons between transcriptome data from Arabidopsis stressed-plants support our hypothesis that some molecular and biological processes involved in biotic and abiotic stress response are conserved. Thirteen of the common regulated genes to abiotic and biotic stresses were studied in detail to determine their role in plant resistance to B. cinerea. Moreover, a T-DNA insertion mutant of the Responsive to Dehydration gene (rd20, encoding for a member of the caleosin (lipid surface protein family, showed an enhanced sensitivity to B. cinerea infection and drought. Overall, the overlapping of plant responses to abiotic and biotic stresses, coupled with the sensitivity of the rd20 mutant, may provide new interesting programs for increased plant resistance to multiple environmental stresses, and ultimately increases its chances to survive. Future research

End-Triassic nonmarine biotic events

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Spencer G. Lucas

2015-10-01

Full Text Available The Late Triassic was a prolonged interval of elevated extinction rates and low origination rates that manifested themselves in a series of extinctions during Carnian, Norian and Rhaetian time. Most of these extinctions took place in the marine realm, particularly affecting radiolarians, conodonts, bivalves, ammonoids and reef-building organisms. On land, the case for a Late Triassic mass extinction is much more tenuous and has largely focused on tetrapod vertebrates (amphibians and reptiles, though some workers advocate a sudden end-Triassic (TJB extinction of land plants. Nevertheless, an extensive literature does not identify a major extinction of land plants at the TJB, and a comprehensive review of palynological records concluded that TJB vegetation changes were non-uniform (different changes in different places, not synchronous and not indicative of a mass extinction of land plants. Claims of a substantial perturbation of plant ecology and diversity at the TJB in East Greenland are indicative of a local change in the paleoflora largely driven by lithofacies changes resulting in changing taphonomic filters. Plant extinctions at the TJB were palaeogeographically localized events, not global in extent. With new and more detailed stratigraphic data, the perceived TJB tetrapod extinction is mostly an artifact of coarse temporal resolution, the compiled correlation effect. The amphibian, archosaur and synapsid extinctions of the Late Triassic are not concentrated at the TJB, but instead occur stepwise, beginning in the Norian and extending into the Hettangian. There was a disruption of the terrestrial ecosystem across the TJB, but it was more modest than generally claimed. The ecological severity of the end-Triassic nonmarine biotic events are relatively low on the global scale. Biotic turnover at the end of the Triassic was likely driven by the CAMP (Central Atlantic Magmatic Province eruptions, which caused significant environmental

Pollinator-independent orchid attracts biotic pollinators due the production of lipoidal substances.

Science.gov (United States)

Pansarin, E R; Bergamo, P J; Ferreira-Caliman, M J

2018-03-01

Flowering plants often depend on the attraction of biotic pollinators for sexual reproduction. Consequently, the emergence and maintenance of selected floral attributes related to pollinator attraction and rewarding are driven by pollinator pressure. In this paper we explore the effect of pollinators, rainfall, temperature and air humidity on the reproduction of a Brazilian terrestrial orchid, Cranichis candida based on data of phenology, flower resources, olfactory and visual attraction cues, pollinators and breeding system. The flowers of C. candida are strongly protandrous and pollinated by workers of the social native bee Tetragonisca angustula. The bees collect labellar lipoidal substances (wax scales), which are transported to the nest. The lipoidal substance is composed of sterols, hydrocarbons and terpenes. The last presumably protects the bees and their nests against pathogens and other arthropods. C. candida sets fruits through biotic self- and cross-pollination, and spontaneously due the action of raindrops on flowers. Our results indicate that in C. candida, although rain-mediated spontaneous self-pollination happens, fructification mediated by biotic pollinations also occurs, which may result in fruit set by cross-pollination. A mixed pollination system must result in higher genetic variability when compared to species whose fruits are produced entirely by self-pollination. On the other hand, autogamy is a form of reproductive assurance, and has commonly evolved where pollination services are rare or absent. © 2017 German Society for Plant Sciences and The Royal Botanical Society of the Netherlands.

Utilizing Genetic Resources and Precision Agriculture to Enhance Resistance to Biotic and Abiotic Stress in Watermelon

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Mihail KANTOR

2018-03-01

Full Text Available Originally from Africa, watermelon is a staple crop in South Carolina and rich source of important phytochemicals that promote human health. As a result of many years of domestication and selection for desired fruit quality, modern watermelon cultivars are susceptible to biotic and abiotic stress. The present review discusses how genetic selection and breeding combined with geospatial technologies (precision agriculture may help enhance watermelon varieties for resistance to biotic and abiotic stress. Gene loci identified and selected in undomesticated watermelon accessions are responsible for resistance to diseases, pests and abiotic stress. Vegetable breeding programs use traditional breeding methodologies and genomic tools to introduce gene loci conferring biotic or abiotic resistance into the genome background of elite watermelon cultivars. This continuous approach of collecting, evaluating and identifying useful genetic material is valuable for enhancing genetic diversity and tolerance and combined with precision agriculture could increase food security in the Southeast.

Development and Validation of an Aquatic Fine Sediment Biotic Index

Science.gov (United States)

Relyea, Christina D.; Minshall, G. Wayne; Danehy, Robert J.

2012-01-01

The Fine Sediment Biotic Index (FSBI) is a regional, stressor-specific biomonitoring index to assess fine sediment (Plecoptera (5), Trichoptera (3), and Ephemeroptera (2) contained all but one of the species or species groups classified as extremely sensitive. Index validation with an independent data set of 255 streams found FSBI scores to accurately predict both high and low levels of measured fine sediment.

Biotic and abiotic variables show little redundancy in explaining tree species distributions

DEFF Research Database (Denmark)

Meier, Elaine S.; Kienast, Felix; Pearman, Peter B.

2010-01-01

Abiotic factors such as climate and soil determine the species fundamental niche, which is further constrained by biotic interactions such as interspecific competition. To parameterize this realized niche, species distribution models (SDMs) most often relate species occurrence data to abiotic var...

Using biotechnology and genomics to improve biotic and abiotic stress in apple

Science.gov (United States)

Genomic sequencing, molecular biology, and transformation technologies are providing valuable tools to better understand the complexity of how plants develop, function, and respond to biotic and abiotic stress. These approaches should complement but not replace a solid understanding of whole plant ...

Genetics and regulation of combined abiotic and biotic stress tolerance in tomato

NARCIS (Netherlands)

Kissoudis, C.

2016-01-01

Projections on the impact of climate change on agricultural productivity foresee prolonged and/or increased stress intensities and enlargement of a significant number of pathogens habitats. This significantly raises the occurrence probability of (new) abiotic and biotic stress combinations. With

Performance of biotic indices in comparison to chemical-based Water Quality Index (WQI) in evaluating the water quality of urban river.

Science.gov (United States)

Wan Abdul Ghani, Wan Mohd Hafezul; Abas Kutty, Ahmad; Mahazar, Mohd Akmal; Al-Shami, Salman Abdo; Ab Hamid, Suhaila

2018-04-19

In order to evaluate the water quality of one of the most polluted urban river in Malaysia, the Penchala River, performance of eight biotic indices, Biomonitoring Working Party (BMWP), BMWP Thai , BMWP Viet , Average Score Per Taxon (ASPT), ASPT Thai , BMWP Viet , Family Biotic Index (FBI), and Singapore Biotic Index (SingScore), was compared. The water quality categorization based on these biotic indices was then compared with the categorization of Malaysian Water Quality Index (WQI) derived from measurements of six water physicochemical parameters (pH, BOD, COD, NH 3 -N, DO, and TSS). The river was divided into four sections: upstream section (recreational area), middle stream 1 (residential area), middle stream 2 (commercial area), and downstream. Abundance and diversity of the macroinvertebrates were the highest in the upstream section (407 individual and H' = 1.56, respectively), followed by the middle stream 1 (356 individual and H' = 0.82). The least abundance was recorded in the downstream section (214 individual). Among all biotic indices, BMWP was the most reliable in evaluating the water quality of this urban river as their classifications were comparable to the WQI. BMWPs in this study have strong relationships with dissolved oxygen (DO) content. Our results demonstrated that the biotic indices were more sensitive towards organic pollution than the WQI. BMWP indices especially BMWP Viet were the most reliable and could be adopted along with the WQI for assessment of water quality in urban rivers.

Land Use in LCIA: an absolute scale proposal for Biotic Production Potential

DEFF Research Database (Denmark)

Saez de Bikuna Salinas, Koldo; Ibrom, Andreas; Hauschild, Michael Zwicky

, the present study proposes a single absolute scale for the midpoint impact category (MIC) of Biotic Production Potential (BPP). It is hypothesized that, for an ecosystem in equilibrium (where NPP equals decay), such an ecosystem has reached the maximum biotic throughput subject to site-specific conditions...... and no externally added inputs. The original ecosystem (or Potential Natural Vegetation) of a certain land gives then the maximum BPP with no additional, downstream or upstream, impacts. This Natural BPP is proposed as the maximum BPP in a hypothetical Absolute Scale for LCA’s Land Use framework. It is argued...... that this maximum BPP is Nature’s optimal solution through evolution-adaptation mechanisms, which provides the maximum matter throughput subject to the rest of environmental constraints (without further impacts). As a consequence, this scale rises a Land Use Optimality Point that suggests the existence of a limit...

Behavior, Expectations and Status

Science.gov (United States)

Webster, Jr, Murray; Rashotte, Lisa Slattery

2010-01-01

We predict effects of behavior patterns and status on performance expectations and group inequality using an integrated theory developed by Fisek, Berger and Norman (1991). We next test those predictions using new experimental techniques we developed to control behavior patterns as independent variables. In a 10-condition experiment, predictions…

Recommended Reference Genes for Quantitative PCR Analysis in Soybean Have Variable Stabilities during Diverse Biotic Stresses.

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Raman Bansal

Full Text Available For real-time reverse transcription-PCR (qRT-PCR in soybean, reference genes in different tissues, developmental stages, various cultivars, and under stress conditions have been suggested but their usefulness for research on soybean under various biotic stresses occurring in North-Central U.S. is not known. Here, we investigated the expression stabilities of ten previously recommended reference genes (ABCT, CYP, EF1A, FBOX, GPDH, RPL30, TUA4, TUB4, TUA5, and UNK2 in soybean under biotic stress from Bean pod mottle virus (BPMV, powdery mildew (PMD, soybean aphid (SBA, and two-spotted spider mite (TSSM. BPMV, PMD, SBA, and TSSM are amongst the most common pest problems on soybean in North-Central U.S. and other regions. Reference gene stability was determined using three software algorithms (geNorm, NormFinder, BestKeeper and a web-based tool (RefFinder. Reference genes showed variability in their expression as well as stability across various stressors and the best reference genes were stress-dependent. ABCT and FBOX were found to be the most stable in soybean under both BPMV and SBA stress but these genes had only minimal to moderate stability during PMD and TSSM stress. Expression of TUA4 and CYP was found to be most stable during PMD stress; TUB4 and TUA4 were stable under TSSM stress. Under various biotic stresses on soybean analyzed, GPDH expression was found to be consistently unstable. For all biotic stressors on soybean, we obtained pairwise variation (V2/3 values less than 0.15 which suggested that combined use of the two most stable reference genes would be sufficient for normalization. Further, we demonstrated the utility of normalizing the qRT-PCR data for target genes using the most stable reference genes validated in current study. Following of the recommendations from our current study will enable an accurate and reliable normalization of qRT-PCR data in soybean under biotic stress.

Partitioning controls on Amazon forest photosynthesis between environmental and biotic factors at hourly to interannual timescales.

Science.gov (United States)

Wu, Jin; Guan, Kaiyu; Hayek, Matthew; Restrepo-Coupe, Natalia; Wiedemann, Kenia T; Xu, Xiangtao; Wehr, Richard; Christoffersen, Bradley O; Miao, Guofang; da Silva, Rodrigo; de Araujo, Alessandro C; Oliviera, Raimundo C; Camargo, Plinio B; Monson, Russell K; Huete, Alfredo R; Saleska, Scott R

2017-03-01

Gross ecosystem productivity (GEP) in tropical forests varies both with the environment and with biotic changes in photosynthetic infrastructure, but our understanding of the relative effects of these factors across timescales is limited. Here, we used a statistical model to partition the variability of seven years of eddy covariance-derived GEP in a central Amazon evergreen forest into two main causes: variation in environmental drivers (solar radiation, diffuse light fraction, and vapor pressure deficit) that interact with model parameters that govern photosynthesis and biotic variation in canopy photosynthetic light-use efficiency associated with changes in the parameters themselves. Our fitted model was able to explain most of the variability in GEP at hourly (R 2  = 0.77) to interannual (R 2  = 0.80) timescales. At hourly timescales, we found that 75% of observed GEP variability could be attributed to environmental variability. When aggregating GEP to the longer timescales (daily, monthly, and yearly), however, environmental variation explained progressively less GEP variability: At monthly timescales, it explained only 3%, much less than biotic variation in canopy photosynthetic light-use efficiency, which accounted for 63%. These results challenge modeling approaches that assume GEP is primarily controlled by the environment at both short and long timescales. Our approach distinguishing biotic from environmental variability can help to resolve debates about environmental limitations to tropical forest photosynthesis. For example, we found that biotically regulated canopy photosynthetic light-use efficiency (associated with leaf phenology) increased with sunlight during dry seasons (consistent with light but not water limitation of canopy development) but that realized GEP was nonetheless lower relative to its potential efficiency during dry than wet seasons (consistent with water limitation of photosynthesis in given assemblages of leaves). This work

Biotic games and cloud experimentation as novel media for biophysics education

Science.gov (United States)

Riedel-Kruse, Ingmar; Blikstein, Paulo

2014-03-01

First-hand, open-ended experimentation is key for effective formal and informal biophysics education. We developed, tested and assessed multiple new platforms that enable students and children to directly interact with and learn about microscopic biophysical processes: (1) Biotic games that enable local and online play using galvano- and photo-tactic stimulation of micro-swimmers, illustrating concepts such as biased random walks, Low Reynolds number hydrodynamics, and Brownian motion; (2) an undergraduate course where students learn optics, electronics, micro-fluidics, real time image analysis, and instrument control by building biotic games; and (3) a graduate class on the biophysics of multi-cellular systems that contains a cloud experimentation lab enabling students to execute open-ended chemotaxis experiments on slimemolds online, analyze their data, and build biophysical models. Our work aims to generate the equivalent excitement and educational impact for biophysics as robotics and video games have had for mechatronics and computer science, respectively. We also discuss how scaled-up cloud experimentation systems can support MOOCs with true lab components and life-science research in general.

Asymmetric biotic interactions and abiotic niche differences revealed by a dynamic joint species distribution model.

Science.gov (United States)

Lany, Nina K; Zarnetske, Phoebe L; Schliep, Erin M; Schaeffer, Robert N; Orians, Colin M; Orwig, David A; Preisser, Evan L

2018-05-01

A species' distribution and abundance are determined by abiotic conditions and biotic interactions with other species in the community. Most species distribution models correlate the occurrence of a single species with environmental variables only, and leave out biotic interactions. To test the importance of biotic interactions on occurrence and abundance, we compared a multivariate spatiotemporal model of the joint abundance of two invasive insects that share a host plant, hemlock woolly adelgid (HWA; Adelges tsugae) and elongate hemlock scale (EHS; Fiorina externa), to independent models that do not account for dependence among co-occurring species. The joint model revealed that HWA responded more strongly to abiotic conditions than EHS. Additionally, HWA appeared to predispose stands to subsequent increase of EHS, but HWA abundance was not strongly dependent on EHS abundance. This study demonstrates how incorporating spatial and temporal dependence into a species distribution model can reveal the dependence of a species' abundance on other species in the community. Accounting for dependence among co-occurring species with a joint distribution model can also improve estimation of the abiotic niche for species affected by interspecific interactions. © 2018 by the Ecological Society of America.

How Biotic Differentiation of Human Impacted Nutrient Poor Deciduous Forests Can Affect the Preservation Status of Mountain Forest Vegetation

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Tomasz Durak

2016-10-01

Full Text Available A significant loss of biodiversity resulting from human activity has caused biotic homogenisation to become the dominant process shaping forest communities. In this paper, we present a rare case of biotic differentiation in European temperate deciduous forest herb layer vegetation. The process is occurring in nutrient poor oak-hornbeam forests in mountain areas (Polish Eastern Carpathians, Central Europe where non-timber use was converted into conventional forest management practice. This change contributed to increases in the nitrogen content and pH reaction of the soil that, contrary to predominant beliefs on the negative impact of habitat eutrophication on diversity, did not result in a decrease in the latter. We discuss possible reasons for this phenomenon that indicate the important role of tree stand composition (an increasing admixture of beech worsening the trophic properties of the soil. The second issue considered involves the effect of the changes in herb species composition of oak-hornbeam forest on its distinctiveness from the beech forest predominating in the Polish Eastern Carpathians. Unfortunately, despite the increase in the species compositional dissimilarity of oak-hornbeam forest, a reduction in their distinctiveness in relation to the herb species composition of beech forest was found. Such a phenomenon is an effect of the major fragmentation of oak-hornbeam forests, a spread of beech forest-type species, and forest management that gives preference to beech trees. Consequently, it can be expected that changes occurring in oak-hornbeam forest vegetation will contribute to a decrease in the forest vegetation variability at the regional scale.

Development and validation of a bacteria-based index of biotic integrity for assessing the ecological status of urban rivers: A case study of Qinhuai River basin in Nanjing, China.

Science.gov (United States)

Li, Jie; Li, Yi; Qian, Bao; Niu, Lihua; Zhang, Wenlong; Cai, Wei; Wu, Hainan; Wang, Peifang; Wang, Chao

2017-07-01

With the increasing human disturbance to urban rivers, the extinction and biodiversity losses of some macroorganism species decreased the accuracy of bioassessment. In this study, a novel index of biotic integrity based on bacteria (Ba-IBI) was first developed for Qinhuai River in Nanjing city, China. Thirty-two biofilm samples were collected along the river bank and the bacterial communities were identified by high-throughput sequencing. By the range, responsive, and redundancy tests, four core metrics were selected from the dataset of 78 candidate metrics, including Pielou's evenness index, proportion of Paenibacillus, proportion of OTUs tolerant to organic pollution and proportion of Nitrosomonas. The results showed that the Ba-IBI was able to effectively discriminate different impaired site groups, and had a good correlation with the index of water quality (r = 0.79, p river. Our study revealed that the Ba-IBI is an effective and reliable approach for assessing the ecological status of Qinhuai River basin, which can complement the existing ecological assessment approaches for urban rivers. Meanwhile, repeted surveys and field validations are still needed to further improve the applicability of the index in future studies. Copyright © 2017 Elsevier Ltd. All rights reserved.

Environmental and biotic controls over aboveground biomass throughout a tropical rainforest

Science.gov (United States)

G.P. Asner; R.F. Hughes; T.A. Varga; D.E. Knapp; T. Kennedy-Bowdoin

2009-01-01

The environmental and biotic factors affecting spatial variation in canopy three-dimensional (3-D) structure and aboveground tree biomass (AGB) are poorly understood in tropical rain forests. We combined field measurements and airborne light detection and ranging (lidar) to quantify 3-D structure and AGB across a 5,016 ha rain forest reserve on the...

The relationship between metal toxicity and biotic ligand binding affinities in aquatic and soil organisms: a review.

Science.gov (United States)

Ardestani, Masoud M; van Straalen, Nico M; van Gestel, Cornelis A M

2014-12-01

The biotic ligand model (BLM) is a theoretical, potentially mechanistic approach to assess metal bioavailability in soil and aquatic systems. In a BLM, toxicity is linked to the fraction of biotic ligand occupied, which in turn, depends on the various components of the solution, including activity of the metal. Bioavailability is a key factor in determining toxicity and uptake of metals in organisms. In this study, the present status of BLM development for soil and aquatic organisms is summarized. For all species and all metals, toxicity was correlated with the conditional biotic ligand binding constants. For almost all organisms, values for Ag, Cu, and Cd were higher than those for Zn and Ni. The constants derived for aquatic systems seem to be equally valid for soil organisms, but in the case of soils, bioavailability from the soil solution is greatly influenced by the presence of the soil solid phase. Copyright © 2014 Elsevier Ltd. All rights reserved.

Temperature, precipitation and biotic interactions as determinants of tree seedling recruitment across the tree line ecotone.

Science.gov (United States)

Tingstad, Lise; Olsen, Siri Lie; Klanderud, Kari; Vandvik, Vigdis; Ohlson, Mikael

2015-10-01

Seedling recruitment is a critical life history stage for trees, and successful recruitment is tightly linked to both abiotic factors and biotic interactions. In order to better understand how tree species' distributions may change in response to anticipated climate change, more knowledge of the effects of complex climate and biotic interactions is needed. We conducted a seed-sowing experiment to investigate how temperature, precipitation and biotic interactions impact recruitment of Scots pine (Pinus sylvestris) and Norway spruce (Picea abies) seedlings in southern Norway. Seeds were sown into intact vegetation and experimentally created gaps. To study the combined effects of temperature and precipitation, the experiment was replicated across 12 sites, spanning a natural climate gradient from boreal to alpine and from sub-continental to oceanic. Seedling emergence and survival were assessed 12 and 16 months after sowing, respectively, and above-ground biomass and height were determined at the end of the experiment. Interestingly, very few seedlings were detected in the boreal sites, and the highest number of seedlings emerged and established in the alpine sites, indicating that low temperature did not limit seedling recruitment. Site precipitation had an overall positive effect on seedling recruitment, especially at intermediate precipitation levels. Seedling emergence, establishment and biomass were higher in gap plots compared to intact vegetation at all temperature levels. These results suggest that biotic interactions in the form of competition may be more important than temperature as a limiting factor for tree seedling recruitment in the sub- and low-alpine zone of southern Norway.

The Genetics Underlying Natural Variation in the Biotic Interactions of Arabidopsis thaliana: The Challenges of Linking Evolutionary Genetics and Community Ecology.

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Roux, F; Bergelson, J

2016-01-01

In the context of global change, predicting the responses of plant communities in an ever-changing biotic environment calls for a multipronged approach at the interface of evolutionary genetics and community ecology. However, our understanding of the genetic basis of natural variation involved in mediating biotic interactions, and associated adaptive dynamics of focal plants in their natural communities, is still in its infancy. Here, we review the genetic and molecular bases of natural variation in the response to biotic interactions (viruses, bacteria, fungi, oomycetes, herbivores, and plants) in the model plant Arabidopsis thaliana as well as the adaptive value of these bases. Among the 60 identified genes are a number that encode nucleotide-binding site leucine-rich repeat (NBS-LRR)-type proteins, consistent with early examples of plant defense genes. However, recent studies have revealed an extensive diversity in the molecular mechanisms of defense. Many types of genetic variants associate with phenotypic variation in biotic interactions, even among the genes of large effect that tend to be identified. In general, we found that (i) balancing selection rather than directional selection explains the observed patterns of genetic diversity within A. thaliana and (ii) the cost/benefit tradeoffs of adaptive alleles can be strongly dependent on both genomic and environmental contexts. Finally, because A. thaliana rarely interacts with only one biotic partner in nature, we highlight the benefit of exploring diffuse biotic interactions rather than tightly associated host-enemy pairs. This challenge would help to improve our understanding of coevolutionary quantitative genetics within the context of realistic community complexity. © 2016 Elsevier Inc. All rights reserved.

Gompertz-Makeham Life Expectancies: Expressions and Applications

DEFF Research Database (Denmark)

Missov, Trifon; Lenart, Adam

2013-01-01

In a population of individuals, whose mortality is governed by a Gompertz–Makeham hazard, we derive closed-form solutions to the life-expectancy integral, corresponding to the cases of homogeneous and gamma-heterogeneous populations, as well as in the presence/absence of the Makeham term. Derived...... expressions contain special functions that aid constructing high-accuracy approximations, which can be used to study the elasticity of life expectancy with respect to model parameters. Knowledge of Gompertz–Makeham life expectancies aids constructing life-table exposures....

Evolution and Adaptation of Wild Emmer Wheat Populations to Biotic and Abiotic Stresses.

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Huang, Lin; Raats, Dina; Sela, Hanan; Klymiuk, Valentina; Lidzbarsky, Gabriel; Feng, Lihua; Krugman, Tamar; Fahima, Tzion

2016-08-04

The genetic bottlenecks associated with plant domestication and subsequent selection in man-made agroecosystems have limited the genetic diversity of modern crops and increased their vulnerability to environmental stresses. Wild emmer wheat, the tetraploid progenitor of domesticated wheat, distributed along a wide range of ecogeographical conditions in the Fertile Crescent, has valuable "left behind" adaptive diversity to multiple diseases and environmental stresses. The biotic and abiotic stress responses are conferred by series of genes and quantitative trait loci (QTLs) that control complex resistance pathways. The study of genetic diversity, genomic organization, expression profiles, protein structure and function of biotic and abiotic stress-resistance genes, and QTLs could shed light on the evolutionary history and adaptation mechanisms of wild emmer populations for their natural habitats. The continuous evolution and adaptation of wild emmer to the changing environment provide novel solutions that can contribute to safeguarding food for the rapidly growing human population.

WATER QUALITY ANALYSIS OF LOTIC ECOSYSTEMS FROM UPPER MUREŞ RIVER CATCHMENT AREA USING DIFFERENT BIOTIC INDICES

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Milca PETROVICI

2012-01-01

Full Text Available Present paper approach the issue of assessing the water quality of tributaries located in the upper basin of the river Mureş, taking into account changes in the value of biotic indices. In this sense, have been selected the next five biotic indices: Ephemeroptera Plecoptera Trichoptera index (EPT, Total Invertebrates index (T, Chironomidae index (Ch, EPT / Total invertebrates index (EPT / T, EPT / Chironomidae index (EPT / Ch and % Chironomidae index (% Chironomidae. Considering all these indices, it was found existence of a medium to best quality water in Mureş tributaries from Harghita Mountains and a good quality water which comes from the Maramureş Mountains and Transylvania Plateau.

DEVELOPMENT OF A STREAM BENTHIC MACROINVERTEBRATE INTEGRITY INDEX (SBMII) FOR WADEABLE STREAMS IN THE MID-ATLANTIC HIGHLANDS REGION

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The Stream Benthic Macroinvertebrate Integrity Index (SBMII), a multimetric biotic index for assessing biological conditions of wadeable streams, was developed using seven macroinvertebrate metrics (Ephemeroptera richness, Plecoptera richness, Trichoptera richness, Collector-Filt...

Habitat selection, facilitation, and biotic settlement cues affect distribution and performance of coral recruits in French Polynesia.

Science.gov (United States)

Price, Nichole

2010-07-01

Habitat selection can determine the distribution and performance of individuals if the precision with which sites are chosen corresponds with exposure to risks or resources. Contrastingly, facilitation can allow persistence of individuals arriving by chance and potentially maladapted to local abiotic conditions. For marine organisms, selection of a permanent attachment site at the end of their larval stage or the presence of a facilitator can be a critical determinant of recruitment success. In coral reef ecosystems, it is well known that settling planula larvae of reef-building corals use coarse environmental cues (i.e., light) for habitat selection. Although laboratory studies suggest that larvae can also use precise biotic cues produced by crustose coralline algae (CCA) to select attachment sites, the ecological consequences of biotic cues for corals are poorly understood in situ. In a field experiment exploring the relative importance of biotic cues and variability in habitat quality to recruitment of hard corals, pocilloporid and acroporid corals recruited more frequently to one species of CCA, Titanoderma prototypum, and significantly less so to other species of CCA; these results are consistent with laboratory assays from other studies. The provision of the biotic cue accurately predicted coral recruitment rates across habitats of varying quality. At the scale of CCA, corals attached to the "preferred" CCA experienced increased survivorship while recruits attached elsewhere had lower colony growth and survivorship. For reef-building corals, the behavioral selection of habitat using chemical cues both reduces the risk of incidental mortality and indicates the presence of a facilitator.

Biotic potential and reproductive parameters of Spodoptera eridania (Stoll (Lepidoptera, Noctuidae in the laboratory

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Débora Goulart Montezano

2013-09-01

Full Text Available Biotic potential and reprodutcive parameters of Spodoptera eridania (Stoll (Lepidoptera, Noctuidae in the laboratory: This study aimed to evaluate the biotic potential and reproductive parameters of Spodoptera eridania (Stoll, 1782 under controlled conditions (25 ± 1ºC, 70 ± 10% RH and 14 hour photophase. The longevity, pre-, post- and oviposition periods, fecundity and fertility of 15 couples was evaluated. The longevity of females (10.80 days was not significantly higher than those of males (9.27 days. The mean durations of the pre, post and oviposition periods were 2.067, 0.600 and 8.133 days, respectively. The mean fecundity per female was 1,398 eggs and the mean fertility was 1,367.50 larvae. On average, females copulated 1.133 times. A strong positive correlation was observed between the number of mating and fecundity (r = 0.881, P <0.001. However a strong negative correlation was observed between the number of copulations and the duration of the pre-oviposition period (r = -0.826, P = 0.002 and longevity (r = -0.823, P = 0.001. The biotic potential of S. eridania was estimated at 1.894 x 10(25 individuals/female/year. The net reproductive rate (Ro was 560.531 times per generation and the mean generation time (T was 35.807 days. The intrinsic rate of increase (rm was 0.177, with a finite rate of increase (l of 1.193, per week

Identifying Watershed, Landscape, and Engineering Design Factors that Influence the Biotic Condition of Restored Streams

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Barbara Doll

2016-04-01

Full Text Available Restored stream reaches at 79 sites across North Carolina were sampled for aquatic macroinvertebrates using a rapid bioassessment protocol. Morphological design parameters and geographic factors, including watershed and landscape parameters (e.g., valley slope, substrate, were also compiled for these streams. Principal component regression analyses revealed correlations between design and landscape variables with macroinvertebrate metrics. The correlations were strengthened by adding watershed variables. Ridge regression was used to find the best-fit model for predicting dominant taxa from the “pollution sensitive” orders of Ephemeroptera (mayflies, Plecoptera (stoneflies, and Trichoptera (caddisflies, or EPT taxa, resulting in coefficient weights that were most interpretable relative to site selection and design parameters. Results indicate that larger (wider streams located in the mountains and foothills where there are steeper valleys, larger substrate, and undeveloped watersheds are expected to have higher numbers of dominant EPT taxa. In addition, EPT taxa numbers are positively correlated with accessible floodplain width and negatively correlated with width-to-depth ratio and sinuosity. This study indicates that both site selection and design should be carefully considered in order to maximize the resulting biotic condition and associated potential ecological uplift of the stream.

The plant cell wall integrity maintenance mechanism--a case study of a cell wall plasma membrane signaling network.

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Hamann, Thorsten

2015-04-01

Some of the most important functions of plant cell walls are protection against biotic/abiotic stress and structural support during growth and development. A prerequisite for plant cell walls to perform these functions is the ability to perceive different types of stimuli in both qualitative and quantitative manners and initiate appropriate responses. The responses in turn involve adaptive changes in cellular and cell wall metabolism leading to modifications in the structures originally required for perception. While our knowledge about the underlying plant mechanisms is limited, results from Saccharomyces cerevisiae suggest the cell wall integrity maintenance mechanism represents an excellent example to illustrate how the molecular mechanisms responsible for stimulus perception, signal transduction and integration can function. Here I will review the available knowledge about the yeast cell wall integrity maintenance system for illustration purposes, summarize the limited knowledge available about the corresponding plant mechanism and discuss the relevance of the plant cell wall integrity maintenance mechanism in biotic stress responses. Copyright © 2014 Elsevier Ltd. All rights reserved.

Biotic transformation of anticoccidials in soil using a lab-scale bio-reactor as a precursor-tool

DEFF Research Database (Denmark)

Hansen, Martin; Björklund, Erland; Krogh, Kristine A

2012-01-01

incubated for 200 h with a mixed culture of soil bacteria. Samples were analyzed by LC-MS/MS and potential transformation products were tentatively identified. Salinomycin was degraded under aerobic conditions and traces could be found after 200 h, however, seems more persistent under anaerobic conditions....... Four transformation products of salinomycin were discovered. Robenidine was degraded under aerobic and anaerobic conditions, however, traces of robenidine were observed after 200 h. Five biotic transformation products of robenidine were discovered.......Two anticoccidial agents, salinomycin and robenidine, heavily used in the worldwide veterinary meat production, were investigated for their potential biotic degradation by cultured soil bacteria. The degradation-study was performed in lab-scale bio-reactors under aerobic and anaerobic conditions...

Transcriptome Analysis of Sunflower Genotypes with Contrasting Oxidative Stress Tolerance Reveals Individual- and Combined- Biotic and Abiotic Stress Tolerance Mechanisms.

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Vemanna S Ramu

Full Text Available In nature plants are often simultaneously challenged by different biotic and abiotic stresses. Although the mechanisms underlying plant responses against single stress have been studied considerably, plant tolerance mechanisms under combined stress is not understood. Also, the mechanism used to combat independently and sequentially occurring many number of biotic and abiotic stresses has also not systematically studied. From this context, in this study, we attempted to explore the shared response of sunflower plants to many independent stresses by using meta-analysis of publically available transcriptome data and transcript profiling by quantitative PCR. Further, we have also analyzed the possible role of the genes so identified in contributing to combined stress tolerance. Meta-analysis of transcriptomic data from many abiotic and biotic stresses indicated the common representation of oxidative stress responsive genes. Further, menadione-mediated oxidative stress in sunflower seedlings showed similar pattern of changes in the oxidative stress related genes. Based on this a large scale screening of 55 sunflower genotypes was performed under menadione stress and those contrasting in oxidative stress tolerance were identified. Further to confirm the role of genes identified in individual and combined stress tolerance the contrasting genotypes were individually and simultaneously challenged with few abiotic and biotic stresses. The tolerant hybrid showed reduced levels of stress damage both under combined stress and few independent stresses. Transcript profiling of the genes identified from meta-analysis in the tolerant hybrid also indicated that the selected genes were up-regulated under individual and combined stresses. Our results indicate that menadione-based screening can identify genotypes not only tolerant to multiple number of individual biotic and abiotic stresses, but also the combined stresses.

Spatially dependent biotic and abiotic factors drive survivorship and physical structure of green roof vegetation.

Science.gov (United States)

Aloisio, Jason M; Palmer, Matthew I; Giampieri, Mario A; Tuininga, Amy R; Lewis, James D

2017-01-01

Plant survivorship depends on biotic and abiotic factors that vary at local and regional scales. This survivorship, in turn, has cascading effects on community composition and the physical structure of vegetation. Survivorship of native plant species is variable among populations planted in environmentally stressful habitats like urban roofs, but the degree to which factors at different spatial scales affect survivorship in urban systems is not well understood. We evaluated the effects of biotic and abiotic factors on survivorship, composition, and physical structure of two native perennial species assemblages, one characterized by a mixture of C 4 grasses and forbs (Hempstead Plains, HP) and one characterized by a mixture of C 3 grasses and forbs (Rocky Summit, RS), that were initially sown at equal ratios of growth forms (5:1:4; grass, N-fixing forb and non-N-fixing forb) in replicate 2-m 2 plots planted on 10 roofs in New York City (New York, USA). Of 24 000 installed plants, 40% survived 23 months after planting. Within-roof factors explained 71% of variation in survivorship, with biotic (species identity and assemblage) factors accounting for 54% of the overall variation, and abiotic (growing medium depth and plot location) factors explaining 17% of the variation. Among-roof factors explained 29% of variation in survivorship and increased solar radiation correlated with decreased survivorship. While growing medium properties (pH, nutrients, metals) differed among roofs there was no correlation with survivorship. Percent cover and sward height increased with increasing survivorship. At low survivorship, cover of the HP assemblage was greater compared to the RS assemblage. Sward height of the HP assemblage was about two times greater compared to the RS assemblage. These results highlight the effects of local biotic and regional abiotic drivers on community composition and physical structure of green roof vegetation. As a result, initial green roof plant

Effects of native biodiversity on grape loss of four castes: testing the biotic resistance hypothesis

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M. Nereu

2018-02-01

Full Text Available Management of agricultural landscapes can influence the biodiversity and the ecological services provided by these ecosystems, such as natural biological pest control. Viticulture is a very important economic activity in most countries with Mediterranean climate, often shaping their landscapes and culture. Grape production is affected by a number of pests and diseases, and farmers use prophylactic and response-driven pesticides to control these pests. Here we quantified the main biotic causes of crop losses in four grape castes, two red (Touriga Nacional and Baga and two white (Arinto and Chardonnay, and evaluated the potential effect of native biodiversity to provide biotic resistance to pest outbreaks and grape losses. Specifically, the diversity and abundance of bird and insect communities in these vineyards were quantified and divided into functional guilds (pest, neutral or auxiliary, to test whether these natural communities hold the potential to naturally control grape pests (biotic resistance hypothesis under normal vineyard management (including pesticide application regimes. A potential association between distance to the vineyard edge and grape losses was also evaluated. We recorded a very small proportion of grape losses (mean  =  0.6 %; max  =  7.5 %, with insect pests showing a preference for the castes Baga (red and Chardonnay (white, while bird pests avoided the caste Arinto (white. Grape color did not influence losses caused by insect pests, but birds showed a preference for red castes. The caste Baga was also more vulnerable to losses caused by fungi. Despite their low impact on grape production, most insects and birds detected in the six vineyards were pests, which entails a potentially low level of biotic resistance in this highly managed agricultural ecosystem. Further research is necessary to fully evaluate the role of functional biodiversity in vineyards, particularly if alternative production processes

Slowing global warming biotically - Options for the United States

International Nuclear Information System (INIS)

Anon.

1991-01-01

Each of the five biotic approaches introduced in Chapter 2 is applicable to some extent in the US. Taking US land-use characteristics into account, a menu of policy options tailored to US carbon storage opportunities is presented. Several of the options are capable of significantly reducing net US carbon emissions; several offer corollary benefits in areas other than global warming mitigation. The time frame and costs of the different options vary widely, although in most cases some level of implementation appears economically justified even without considering global warming. The approach, projected costs, and advantages of seven different policy options are profiled

Prior expectations facilitate metacognition for perceptual decision.

Science.gov (United States)

Sherman, M T; Seth, A K; Barrett, A B; Kanai, R

2015-09-01

The influential framework of 'predictive processing' suggests that prior probabilistic expectations influence, or even constitute, perceptual contents. This notion is evidenced by the facilitation of low-level perceptual processing by expectations. However, whether expectations can facilitate high-level components of perception remains unclear. We addressed this question by considering the influence of expectations on perceptual metacognition. To isolate the effects of expectation from those of attention we used a novel factorial design: expectation was manipulated by changing the probability that a Gabor target would be presented; attention was manipulated by instructing participants to perform or ignore a concurrent visual search task. We found that, independently of attention, metacognition improved when yes/no responses were congruent with expectations of target presence/absence. Results were modeled under a novel Bayesian signal detection theoretic framework which integrates bottom-up signal propagation with top-down influences, to provide a unified description of the mechanisms underlying perceptual decision and metacognition. Copyright © 2015 Elsevier Inc. All rights reserved.

Hydro-chemical study of the evolution of interstellar pre-biotic molecules during the collapse of molecular clouds

International Nuclear Information System (INIS)

Majumdar, Liton; Das, Ankan; Chakrabarti, Sandip K.; Chakrabarti, Sonali

2012-01-01

One of the stumbling blocks for studying the evolution of interstellar molecules is the lack of adequate knowledge about the rate coefficients of various reactions which take place in the interstellar medium and molecular clouds. Some theoretical models of rate coefficients do exist in the literature for computing abundances of complex pre-biotic molecules. So far these have been used to study the abundances of these molecules in space. However, in order to obtain more accurate final compositions in these media, we have calculated the rate coefficients for the formation of some of the most important interstellar pre-biotic molecules by using quantum chemical theory. We use these rates inside our hydro-chemical model to examine the chemical evolution and final abundances of pre-biotic species during the collapsing phase of a proto-star. We find that a significant amount of various pre-biotic molecules could be produced during the collapse phase of a proto-star. We thoroughly study the formation of these molecules via successive neutral-neutral and radical-radical/radical-molecular reactions. We present the time evolution of the chemical species with an emphasis on how the production of these molecules varies with the depth of a cloud. We compare the formation of adenine in interstellar space using our rate-coefficients and using those obtained from existing theoretical models. Formation routes of the pre-biotic molecules are found to be highly dependent on the abundances of the reactive species and the rate coefficients involved in the reactions. The presence of grains strongly affects the abundances of the gas phase species. We also carry out a comparative study between different pathways available for the synthesis of adenine, alanine, glycine and other molecules considered in our network. Despite the huge abundances of the neutral reactive species, production of adenine is found to be strongly dominated by the radical-radical/radical-molecular reaction pathways

Spatial variability of biotic and abiotic tree establishment constraints across a treeline ecotone in the Alaska range.

Science.gov (United States)

Stueve, Kirk M; Isaacs, Rachel E; Tyrrell, Lucy E; Densmore, Roseann V

2011-02-01

Throughout interior Alaska (U.S.A.), a gradual warming trend in mean monthly temperatures occurred over the last few decades (approximatlely 2-4 degrees C). The accompanying increases in woody vegetation at many alpine treeline (hereafter treeline) locations provided an opportunity to examine how biotic and abiotic local site conditions interact to control tree establishment patterns during warming. We devised a landscape ecological approach to investigate these relationships at an undisturbed treeline in the Alaska Range. We identified treeline changes between 1953 (aerial photography) and 2005 (satellite imagery) in a geographic information system (GIS) and linked them with corresponding local site conditions derived from digital terrain data, ancillary climate data, and distance to 1953 trees. Logistic regressions enabled us to rank the importance of local site conditions in controlling tree establishment. We discovered a spatial transition in the importance of tree establishment controls. The biotic variable (proximity to 1953 trees) was the most important tree establishment predictor below the upper tree limit, providing evidence of response lags with the abiotic setting and suggesting that tree establishment is rarely in equilibrium with the physical environment or responding directly to warming. Elevation and winter sun exposure were important predictors of tree establishment at the upper tree limit, but proximity to trees persisted as an important tertiary predictor, indicating that tree establishment may achieve equilibrium with the physical environment. However, even here, influences from the biotic variable may obscure unequivocal correlations with the abiotic setting (including temperature). Future treeline expansion will likely be patchy and challenging to predict without considering the spatial variability of influences from biotic and abiotic local site conditions.

Advancing the expectancy concept via the interplay between theory and research.

Science.gov (United States)

Del Boca, Frances K; Darkes, Jack; Goldman, Mark S; Smith, Gregory T

2002-06-01

Four papers from a 2001 Research Society on Alcoholism symposium on expectancy theory and research are summarized. The symposium contributors describe recent advances in expectancy theory and discuss their implications for assessment and for understanding the processes of development and change in the behavioral domain of alcohol use. First, findings are integrated across the diverse domains in which the expectancy concept has been applied. Second, the implications of expectancy theory for the measurement of expectancy structure and process are examined. Third, research and theory regarding alcohol expectancy development and change are presented, with an emphasis on the role of expectancies as mediators of known antecedents of drinking. Finally, an experimental procedure for investigating the causal role of expectancies is described, together with its implications for theory testing and prevention or intervention programming. Collectively, the symposium contributions demonstrate the utility of an integrated expectancy theory for the generation of innovative research operations and new insights regarding behavior development and change. Consistent with the notion of consilience, expectancy theory has demonstrated a convergence of findings across different levels of analysis, as well as across different operations, methods, and research designs.

A Theory of False Cognitive Expectancies in Airline Pilots

Science.gov (United States)

Cortes, Antonio I.

The Theory of False Cognitive Expectancies was developed by studying high reliability flight operations. Airline pilots depend extensively on cognitive expectancies to perceive, understand, and predict actions and events. Out of 1,363 incident reports submitted by airline pilots to the National Aeronautics and Space Administration Aviation Safety Reporting System over a year's time, 110 reports were found to contain evidence of 127 false cognitive expectancies in pilots. A comprehensive taxonomy was developed with six categories of interest. The dataset of 127 false expectancies was used to initially code tentative taxon values for each category. Intermediate coding through constant comparative analysis completed the taxonomy. The taxonomy was used for the advanced coding of chronological context-dependent visualizations of expectancy factors, known as strands, which depict the major factors in the creation and propagation of each expectancy. Strands were mapped into common networks to detect highly represented expectancy processes. Theoretical integration established 11 sources of false expectancies, the most common expectancy errors, and those conspicuous factors worthy of future study. The most prevalent source of false cognitive expectancies within the dataset was determined to be unconscious individual modeling based on past events. Integrative analyses also revealed relationships between expectancies and flight deck automation, unresolved discrepancies, and levels of situation awareness. Particularly noteworthy were the findings that false expectancies can combine in three possible permutations to diminish situation awareness and examples of how false expectancies can be unwittingly transmitted from one person to another. The theory resulting from this research can enhance the error coding process used during aircraft line oriented safety audits, lays the foundation for developing expectancy management training programs, and will allow researchers to proffer

Biotic and Biogeochemical Feedbacks to Climate Change

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Torn, M. S.; Harte, J.

2002-12-01

Feedbacks to paleoclimate change are evident in ice core records showing correlations of temperature with carbon dioxide, nitrous oxide, and methane. Such feedbacks may be explained by plant and microbial responses to climate change, and are likely to occur under impending climate warming, as evidenced by results of ecosystem climate manipulation experiments and biometeorological observations along ecological and climate gradients. Ecosystems exert considerable influence on climate, by controlling the energy and water balance of the land surface as well as being sinks and sources of greenhouse gases. This presentation will focus on biotic and biogeochemical climate feedbacks on decadal to century time scales, emphasizing carbon storage and energy exchange. In addition to the direct effects of climate on decomposition rates and of climate and CO2 on plant productivity, climate change can alter species composition; because plant species differ in their surface properties, productivity, phenology, and chemistry, climate-induced changes in plant species composition can exert a large influence on the magnitude and sign of climate feedbacks. We discuss the effects of plant species on ecosystem carbon storage that result from characteristic differences in plant biomass and lifetime, allocation to roots vs. leaves, litter quality, microclimate for decomposition and the ultimate stabilization of soil organic matter. We compare the effect of species transitions on transpiration, albedo, and other surface properties, with the effect of elevated CO2 and warming on single species' surface exchange. Global change models and experiments that investigate the effect of climate only on existing vegetation may miss the biggest impacts of climate change on biogeochemical cycling and feedbacks. Quantification of feedbacks will require understanding how species composition and long-term soil processes will change under global warming. Although no single approach, be it experimental

Biotic resistance: Exclusion of native rodent consumers releases populations of a weak invader

Science.gov (United States)

Dean E. Pearson; Teal Potter; John L. Maron

2012-01-01

Biotic resistance is a commonly invoked hypothesis to explain why most exotic plant species naturalize at low abundance. Although numerous studies have documented negative impacts of native consumers on exotic plant performance, longer-term multi-generation studies are needed to understand how native consumer damage to exotics translates to their population-level...

Interactive Biophysics with Microswimmers: Education, Cloud Experimentation, Programmed Swarms, and Biotic Games

Science.gov (United States)

Riedel-Kruse, Ingmar

Modern biotechnology gets increasingly powerful to manipulate and measure microscopic biophysical processes. Nevertheless, no platform exists to truly interact with these processes, certainly not with the convenience that we are accustomed to from our electronic smart devices. In my talk I will provide the rational for such Interactive Biotechnology and conceptualize its core component, the BPU (biotic processing unit), which is then connected to an according user interface. The biophysical phenomena currently featured on these platforms utilize the phototactic response of motile microorganisms, e.g., Euglena gracilis, resulting in spatio-temporal dynamics from the single cell to the self-organized multi-cellular scale. I will demonstrate multiple platforms, such as scalable biology cloud experimentation labs, tangible museum exhibits, biotic video games, low-cost interactive DIY kits using smartphones, and programming languages for swarm robotics. I will discuss applications for education as well as for professional and citizen science. Hence, we turn traditionally observational microscopy into an interactive experience. I was told that presenting in the educational section does not count against the ''one author - one talk policy'' - so I submit two abstracts. In case of conflict - please contact me: ingmar@stanford.edu.

Ectopic overexpression of WsSGTL1, a sterol glucosyltransferase gene in Withania somnifera, promotes growth, enhances glycowithanolide and provides tolerance to abiotic and biotic stresses.

Science.gov (United States)

Saema, Syed; Rahman, Laiq Ur; Singh, Ruchi; Niranjan, Abhishek; Ahmad, Iffat Zareen; Misra, Pratibha

2016-01-01

Overexpression of sterol glycosyltransferase (SGTL1) gene of Withania somnifera showing its involvement in glycosylation of withanolide that leads to enhanced growth and tolerance to biotic and abiotic stresses. Withania somnifera is widely used in Ayurvedic medicines for over 3000 years due to its therapeutic properties. It contains a variety of glycosylated steroids called withanosides that possess neuroregenerative, adaptogenic, anticonvulsant, immunomodulatory and antioxidant activities. The WsSGTL1 gene specific for 3β-hydroxy position has a catalytic specificity to glycosylate withanolide and sterols. Glycosylation not only stabilizes the products but also alters their physiological activities and governs intracellular distribution. To understand the functional significance and potential of WsSGTL1 gene, transgenics of W. somnifera were generated using Agrobacterium tumefaciens-mediated transformation. Stable integration and overexpression of WsSGTL1 gene were confirmed by Southern blot analysis followed by quantitative real-time PCR. The WsGTL1 transgenic plants displayed number of alterations at phenotypic and metabolic level in comparison to wild-type plants which include: (1) early and enhanced growth with leaf expansion and increase in number of stomata; (2) increased production of glycowithanolide (majorly withanoside V) and campesterol, stigmasterol and sitosterol in glycosylated forms with reduced accumulation of withanolides (withaferin A, withanolide A and withanone); (3) tolerance towards biotic stress (100 % mortality of Spodoptera litura), improved survival capacity under abiotic stress (cold stress) and; (4) enhanced recovery capacity after cold stress, as indicated by better photosynthesis performance, chlorophyll, anthocyanin content and better quenching regulation of PSI and PSII. Our data demonstrate overexpression of WsSGTL1 gene which is responsible for increase in glycosylated withanolide and sterols, and confers better growth and

Local shifts in floral biotic interactions in habitat edges and their effect on quantity and quality of plant offspring

Science.gov (United States)

Fenu, Giuseppe; Bernardo, Liliana

2017-01-01

Abstract Spatial shifts in insect fauna due to ecological heterogeneity can severely constrain plant reproduction. Nonetheless, data showing effects of insect visit patterns and intensity of mutualistic and/or antagonistic plant–insect interactions on plant reproduction over structured ecological gradients remain scarce. We investigated how changes in flower-visitor abundance, identity and behaviour over a forest-open habitat gradient affect plant biotic interactions, and quantitative and qualitative fitness in the edge-specialist Dianthus balbisii. Composition and behaviour of the insects visiting flowers of D. balbisii strongly varied over the study gradient, influencing strength and patterns of plant biotic interactions (i.e. herbivory and pollination likelihood). Seed set comparison in free- and manually pollinated flowers suggested spatial variations in the extent of quantitative pollen limitation, which appeared more pronounced at the gradient extremes. Such variations were congruent to patterns of flower visit and plant biotic interactions. The analyses on seed and seedling viability evidenced that spatial variation in amount and type of pollinators, and frequency of herbivory affected qualitative fitness of D. balbisii by influencing selfing and outcrossing rates. Our work emphasizes the role of plant biotic interactions as a fine-scale mediator of plant fitness in ecotones, highlighting that optimal plant reproduction can take place into a restricted interval of the ecological gradients occurring at forest edges. Reducing the habitat complexity typical of such transition contexts can threat edge-adapted plants. PMID:28775831

Rodent seed predation as a biotic filter influencing exotic plant abundance and distribution

Science.gov (United States)

D. E. Pearson; J. L. Hierro; M. Chiuffo; D. Villarreal

2014-01-01

Biotic resistance is commonly invoked to explain why many exotic plants fail to thrive in introduced ranges, but the role of seed predation as an invasion filter is understudied. Abiotic conditions may also influence plant populations and can interact with consumers to determine plant distributions, but how these factors jointly influence invasions is poorly understood...

Forest calcium depletion and biotic retention along a soil nitrogen gradient

Science.gov (United States)

Perakis, Steven S.; Sinkhorn, Emily R.; Catricala, Christina; Bullen, Thomas D.; Fitzpatrick, John A.; Hynicka, Justin D.; Cromack, Kermit

2013-01-01

High nitrogen (N) accumulation in terrestrial ecosystems can shift patterns of nutrient limitation and deficiency beyond N toward other nutrients, most notably phosphorus (P) and base cations (calcium [Ca], magnesium [Mg], and potassium [K]). We examined how naturally high N accumulation from a legacy of symbiotic N fixation shaped P and base cation cycling across a gradient of nine temperate conifer forests in the Oregon Coast Range. We were particularly interested in whether long-term legacies of symbiotic N fixation promoted coupled N and organic P accumulation in soils, and whether biotic demands by non-fixing vegetation could conserve ecosystem base cations as N accumulated. Total soil N (0–100 cm) pools increased nearly threefold across the N gradient, leading to increased nitrate leaching, declines in soil pH from 5.8 to 4.2, 10-fold declines in soil exchangeable Ca, Mg, and K, and increased mobilization of aluminum. These results suggest that long-term N enrichment had acidified soils and depleted much of the readily weatherable base cation pool. Soil organic P increased with both soil N and C across the gradient, but soil inorganic P, biomass P, and P leaching loss did not vary with N, implying that historic symbiotic N fixation promoted soil organic P accumulation and P sufficiency for non-fixers. Even though soil pools of Ca, Mg, and K all declined as soil N increased, only Ca declined in biomass pools, suggesting the emergence of Ca deficiency at high N. Biotic conservation and tight recycling of Ca increased in response to whole-ecosystem Ca depletion, as indicated by preferential accumulation of Ca in biomass and surface soil. Our findings support a hierarchical model of coupled N–Ca cycling under long-term soil N enrichment, whereby ecosystem-level N saturation and nitrate leaching deplete readily available soil Ca, stimulating biotic Ca conservation as overall supply diminishes. We conclude that a legacy of biological N fixation can increase N

A Big Bang or small bangs? Effects of biotic environment on hatching

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Marina MANCA

2008-08-01

Full Text Available The beginning and end of diapause are two important transition points in cladoceran life history. The influence of environmental variables on the dynamics of these processes still deserves attention, especially as concerns the role of biotic factors. In this paper we focus on emergence from diapause, testing (1 whether ephippia of Daphnia obtusa Kurz can assess the presence in the water of typical planktivorous fish or ostracods, and (2 whether such an assessment results in changes in hatching strategy. Total number of hatchlings from D. obtusa ephippial eggs did not differ between the control and the treatments in which the presence of fish or ostracods could be detected (ANOVA, P = 0.884. However, hatching dynamics were different: most of the eggs hatched synchronously at day 4 (83.3% of the total hatchlings number in the control, while only a low proportion of eggs hatched on day 4 in the fish (38.3%, and ostracod treatments (24.0% of the total. Mean hatching time was longer, and variability larger, in the treatments than in the control; differences resulted statistically significant (ANOVA, P = 0.005. With respect to the control, representing a simple microcosm controlled by abiotic variables only, the treatments may be regarded as relatively complex environments, in which Daphnia is also exposed to biotic cues. Under these more complex conditions, the same number of hatchlings is obtained through different hatching dynamics. In the treatments, the first hatchlings appeared later and the hatching rate was more variable than in the control. These observations confirm previously observed patterns from laboratory experiments which tested the effect of competition and fluctuating environmental conditions (light:dark, temperature regimes on D. obtusa reproductive and demographic parameters. They are also in agreement with recently obtained evidence concerning the importance of biotic cues for hatching of ephippial eggs. Overall, the evidence

Beliefs and expectations of Canadian parents who bring febrile children for medical care.

Science.gov (United States)

Enarson, Mark C; Ali, Samina; Vandermeer, Ben; Wright, Robert B; Klassen, Terry P; Spiers, Judith A

2012-10-01

The purpose of this survey was to study the beliefs, expectations, and satisfaction of Canadian parents regarding fever and the treatment of their febrile children. A survey was developed exploring caregiver beliefs and treatment strategies, as well as expectations and satisfaction with medical care. Some items were modeled after previous studies to allow comparison. Caregivers with febrile children were recruited from 2005 to 2007 at 3 urgent care centers and emergency departments in Edmonton, Canada: a pediatric emergency department (n = 376), an urban urgent care center (n = 227), and a suburban urgent care clinic (n = 173). High and rapidly rising temperature, as well as physical symptoms associated with fever, caused concern in most parents surveyed. Seventy-four percent of parents felt that the elevated temperature from fever was dangerous and 90.3% always try to treat it. Forty degrees Celsius was the most commonly sited threshold for danger. Identifying the cause (80.6%) and seriousness (87.4%) of fever were the most com-mon stressors identified. Caregivers expected to receive information about the child's illness and appropriate treatment. The parents most often wanted information about febrile seizures and the potential dangers of febrile illness. Only 16.7% of caregivers expected anti-biotics. Nearly 92% of subjects were usually satisfied with medical care. Fever phobia continues to be a significant issue for Canadian parents. As a result, they treat fever aggressively and often seek medical attention. Good communication is important for medical staff caring for febrile children and typically leads to satisfied parents.

MANAGEMENT OF THE WHITE-CLAWED CRAYFISH (AUSTROPOTAMOBIUS PALLIPES IN WESTERN FRANCE: ABIOTIC AND BIOTIC FACTORS STUDY

Directory of Open Access Journals (Sweden)

TROUILHE M. C.

2003-04-01

Full Text Available In France, the distribution of the white-clawed crayfish, Austropotamobius pallipes (Lereboullet, 1858, is restricted, fragmented and mainly located in headwaters. To preserve this indigenous species, it is necessary to characterize its ecological requirements (water and habitat quality. With this aim in view, a two-year study is being conducted in the Deux-Sèvres department (Western France since November 2002. Nine brooks from four different catchments are monitored regularly; eight of the nine brooks harbour whiteclawed crayfish populations. Two sampling sites are surveyed per brook, the first being where the crayfish population is located and the second 2 to 3 km downstream. Physicochemical parameters (18 are measured twice monthly and biotic factors are estimated twice yearly. In this study, the I.B.G.N. (Indice Biologique Global Normalisé protocol based on the determination of macroinvertebrates was used as a biotic index of biological water quality. Results of this preliminary study on two brooks (Thouet and Verdonnière show that physico-chemical and biological data considered separately do not provide reliable information about A. pallipes ecological requirements. However, the use of multivariate analyses (Principal Component Analysis to combine abiotic and biotic factors highlights a good correlation between these parameters. Organic matter appears to be a better discriminating factor than mineral matter affecting presence or absence of the whiteclawed crayfish.

Integrated assessment of river health based on the conditions of water quality,aquatic life and physical habitat

Institute of Scientific and Technical Information of China (English)

MENG Wei; ZHANG Nan; ZHANG Yuan; ZHENG Binghui

2009-01-01

The health conditions of Liao River were assessed using 25 sampling sites in April 2005, with water quality index, biotic index and physical habitat quality index.Based on the method of cluster analysis (CA) for water quality indices, it reveals that heavily polluted sites of Liao River are located at estuary and mainstream.The aquatic species surveyed were attached algae and benthic invertebrates.The result shows that the diversity and biomass of attached algae and benthic index of biotic integrity (B-IBI) are degrading as the chemical and physical quality of water bodies deteriorating.Physiochemical parameters, BOD5, CODCr, TN, TP, NH3-N, DO, petroleum hydrocarbon and conductivity, were statistically analyzed with principal component analysis and correlation analysis.The statistical results were incorporated into the integrated assessing water quality index, combining fecal coliform count, attached algae diversity, B-IBI and physical habitat quality score, a comprehensive integrated assessing system of river ecological health was established.Based on the systimetic assesment, the assessed sites are categorized into 9 "healthy" and "sub-healthy" sites and 8 "sub-sick" and "sick" sites.

Quantifying biological integrity by taxonomic completeness: its utility in regional and global assessments.

Science.gov (United States)

Hawkins, Charles P

2006-08-01

Water resources managers and conservation biologists need reliable, quantitative, and directly comparable methods for assessing the biological integrity of the world's aquatic ecosystems. Large-scale assessments are constrained by the lack of consistency in the indicators used to assess biological integrity and our current inability to translate between indicators. In theory, assessments based on estimates of taxonomic completeness, i.e., the proportion of expected taxa that were observed (observed/expected, O/E) are directly comparable to one another and should therefore allow regionally and globally consistent summaries of the biological integrity of freshwater ecosystems. However, we know little about the true comparability of O/E assessments derived from different data sets or how well O/E assessments perform relative to other indicators in use. I compared the performance (precision, bias, and sensitivity to stressors) of O/E assessments based on five different data sets with the performance of the indicators previously applied to these data (three multimetric indices, a biotic index, and a hybrid method used by the state of Maine). Analyses were based on data collected from U.S. stream ecosystems in North Carolina, the Mid-Atlantic Highlands, Maine, and Ohio. O/E assessments resulted in very similar estimates of mean regional conditions compared with most other indicators once these indicators' values were standardized relative to reference-site means. However, other indicators tended to be biased estimators of O/E, a consequence of differences in their response to natural environmental gradients and sensitivity to stressors. These results imply that, in some cases, it may be possible to compare assessments derived from different indicators by standardizing their values (a statistical approach to data harmonization). In situations where it is difficult to standardize or otherwise harmonize two or more indicators, O/E values can easily be derived from existing

Invasion by native tree species prevents biotic homogenization in novel forests of Puerto Rico

Science.gov (United States)

Oscar J. Abelleira Martinez

2010-01-01

There is concern that secondary forests dominated by introduced species, known as novel forests, increase taxonomical similarity between localities and lead to biotic homogenization in human dominated landscapes. In Puerto Rico, agricultural abandonment has given way to novel forests dominated by the introduced African tulip tree Spathodea campanulata Beauv. (...

Leadership emergence over time in short-lived groups: Integrating expectations states theory with temporal person-perception and self-serving bias.

Science.gov (United States)

Kalish, Yuval; Luria, Gil

2016-10-01

Research into leadership emergence typically focuses on the attributes of the emergent leader. By considering also the attributes of perceivers and the passage of time, we develop a more complete theory of leadership emergence in short-lived groups. Using expectation states theory as an overarching theoretical framework, and integrating it with the surface- and deep-level diversity literature and with theories of self-serving biases, we examine the predictors of leadership emergence in short timeframes. We conduct a field study in a military assessment boot camp (a pilot study, n = 60; and a main study, n = 89). We use cross-sectional and longitudinal exponential random graph models to analyze data on participants' abilities and on their perceptions of who, in their respective groups, were "leaders." We find that the criteria by which people perceive leadership in others change over time, from easily noticeable attributes to covert leadership-relevant attributes, and that people also rely on leadership-relevant attributes that they possess at high levels to inform their perceptions of leadership in others. The integration of expectation states theory, attribute salience over time and theories of self-serving bias is needed for a full understanding of leadership emergence in groups, because perceivers' own abilities are instrumental in shaping their perceptions of emergent leadership over time. Theoretical and practical implications are discussed. (PsycINFO Database Record (c) 2016 APA, all rights reserved).

Spring integration essentials

CERN Document Server

Pandey, Chandan

2015-01-01

This book is intended for developers who are either already involved with enterprise integration or planning to venture into the domain. Basic knowledge of Java and Spring is expected. For newer users, this book can be used to understand an integration scenario, what the challenges are, and how Spring Integration can be used to solve it. Prior experience of Spring Integration is not expected as this book will walk you through all the code examples.

The role of biotic interactions in plant community assembly: What is the community species pool?

Science.gov (United States)

Švamberková, Eva; Vítová, Alena; Lepš, Jan

2017-11-01

Differences in plant species composition between a community and its species pool are considered to reflect the effect of community filters. If we define the species pool as a set of species able to reach a site and form a viable population in a given abiotic environment (i.e. to pass the dispersal and abiotic filter), the difference in species composition should correspond to the effect of biotic interactions. However, most of the operational definitions of the species pool are based on co-occurrence patterns and thus also reflect the effect of biotic relationships, including definitions based on functional plant traits, Ellenberg indicator values or Beals index. We conducted two seed introduction experiments in an oligotrophic wet meadow with the aim of demonstrating that many species excluded, according to the above definitions, from a species pool are in fact able to establish there successfully if competition is removed. In sowing experiments, we studied the establishment and survival of species after the removal of competition (i.e. in artificial gaps) and in intact vegetation. We also investigated inter-annual variability of seed germination and seedling establishment and competitive exclusion of sown species. The investigated species also included those from very different habitats (i.e. species with very low corresponding Beals index or Ellenberg indicator values that were different from the target community weighted mean). Many of these species were able to grow in the focal wet meadow if competition was removed, but they did not establish and survive in the intact community. These species are thus not limited by abiotic conditions, but by the biotic filter. We also recorded a great inter-annual variability in seed germination and seedling establishment. Competitive exclusion of species with different ecological requirements could be quite fast (one and half seasons) in some species, but some non-resident species were able to survive several seasons; the

Abiotic and biotic controls over biogeochemical cycles in drylands: Insights from climate change and nitrogen deposition experiments on the Colorado Plateau

Science.gov (United States)

Reed, S.; Ferrenberg, S.; Tucker, C.; Rutherford, W. A.; Wertin, T. M.; McHugh, T. A.; Morrissey, E.; Kuske, C.; Mueller, R.; Belnap, J.

2016-12-01

As for all ecosystems, biogeochemical cycling in drylands represents numerous intricate connections between biotic and abiotic controls. However, patterns of many fundamental ecosystem processes that generally hold across global gradients fall apart at the arid and semiarid end of the spectrum, and data point to an exceptionally strong role for abiotic controls in explaining these patterns. Further, there are multiple dryland characteristics - such as extreme aridity and high UV radiation, as well as specialized biological communities - which can point to a conclusion that "drylands are different". Indeed, drylands are often characterized by their harsh environment, by the diverse classes of biota representing a range of traits aimed at surviving such harsh conditions, and, more recently, by the suggestion of dramatic biotic responses to seemingly subtle changes in abiotic factors. In this talk, we will explore a range of biotic and abiotic controls over fundamental biogeochemical cycling in drylands using data from a suite of manipulation experiments on the Colorado Plateau, USA. We will present results from field treatments that speak to the effects of increasing temperature, altered precipitation regimes, increased nitrogen availability via deposition, and the effects of altered litterfall inputs. Biogeochemical processes we explore will include plant photosynthesis, soil photosynthesis and respiration (with a focus on biological soil crusts), litter decomposition, and nutrient cycling. In addition, we will assess how treatments alter dryland community composition, as well as the resultant feedbacks of community shifts to environmental change. Taken together we will use these diverse datasets to ask questions about what makes drylands different or, instead, if a holistic joining of biotic and abiotic perspectives suggests they are not so different after all. These data will not only lend insight into the partitioning of and balance between biotic and abiotic

Carbonate-platform response to the Toarcian Oceanic Anoxic Event in the southern hemisphere: Implications for climatic change and biotic platform demise

Science.gov (United States)

Han, Zhong; Hu, Xiumian; Kemp, David B.; Li, Juan

2018-05-01

The Toarcian Oceanic Anoxic Event (T-OAE, ∼183 Ma) was a profound short-term environmental perturbation associated with the large-scale release of 13C-depleted carbon into the global ocean-atmosphere system, which resulted in a significant negative carbon-isotope excursion (CIE). The general lack of characteristic T-OAE records outside of the northern hemisphere means that the precise environmental effects and significance of this event are uncertain. Many biotic carbonate platforms of the northern hemisphere western Tethys drowned or shifted to non-skeletal platforms during the early Toarcian. However, southern hemisphere records of Toarcian carbonate platforms are rare, and thus the extent and significance of biotic platform demise during the T-OAE is unclear. Here we present high-resolution geochemical and sedimentological data across two Pliensbachian-Toarcian shallow-water carbonate-platform sections exposed in the Tibetan Himalaya. These sections were located paleogeographically on the open southeastern tropical Tethyan margin in the southern hemisphere. The T-OAE in the Tibetan Himalaya is marked by a negative CIE in organic matter. Our sedimentological analysis of the two sections reveals an abundance of storm deposits within the T-OAE interval, which emphasizes a close link between warming and tropical storms during the T-OAE event, in line with evidence recently provided from western Tethyan sections of the northern hemisphere. In addition, our analysis also reveals extensive biotic carbonate-platform demise by drowning or changing to non-skeletal carbonates coincident with the onset of the CIE. Taken together, our results suggest that rapid and pervasive seawater warming in response to carbon release likely played a significant role in sudden biotic carbonate platform demise, and suppression/postponement of biotic platform re-development along the whole tropical/subtropical Tethyan margin.

Expected value based fuzzy programming approach to solve integrated supplier selection and inventory control problem with fuzzy demand

Science.gov (United States)

Sutrisno; Widowati; Sunarsih; Kartono

2018-01-01

In this paper, a mathematical model in quadratic programming with fuzzy parameter is proposed to determine the optimal strategy for integrated inventory control and supplier selection problem with fuzzy demand. To solve the corresponding optimization problem, we use the expected value based fuzzy programming. Numerical examples are performed to evaluate the model. From the results, the optimal amount of each product that have to be purchased from each supplier for each time period and the optimal amount of each product that have to be stored in the inventory for each time period were determined with minimum total cost and the inventory level was sufficiently closed to the reference level.

Rapid biotic homogenization of marine fish assemblages

Science.gov (United States)

Magurran, Anne E.; Dornelas, Maria; Moyes, Faye; Gotelli, Nicholas J.; McGill, Brian

2015-01-01

The role human activities play in reshaping biodiversity is increasingly apparent in terrestrial ecosystems. However, the responses of entire marine assemblages are not well-understood, in part, because few monitoring programs incorporate both spatial and temporal replication. Here, we analyse an exceptionally comprehensive 29-year time series of North Atlantic groundfish assemblages monitored over 5° latitude to the west of Scotland. These fish assemblages show no systematic change in species richness through time, but steady change in species composition, leading to an increase in spatial homogenization: the species identity of colder northern localities increasingly resembles that of warmer southern localities. This biotic homogenization mirrors the spatial pattern of unevenly rising ocean temperatures over the same time period suggesting that climate change is primarily responsible for the spatial homogenization we observe. In this and other ecosystems, apparent constancy in species richness may mask major changes in species composition driven by anthropogenic change. PMID:26400102

Abiotic and Biotic Factors Regulating Inter-Kingdom Engagement between Insects and Microbe Activity on Vertebrate Remains

Science.gov (United States)

Jordan, Heather R.; Tomberlin, Jeffery K.

2017-01-01

A number of abiotic and biotic factors are known to regulate arthropod attraction, colonization, and utilization of decomposing vertebrate remains. Such information is critical when assessing arthropod evidence associated with said remains in terms of forensic relevance. Interactions are not limited to just between the resource and arthropods. There is another biotic factor that has been historically overlooked; however, with the advent of high-throughput sequencing, and other molecular techniques, the curtain has been pulled back to reveal a microscopic world that is playing a major role with regards to carrion decomposition patterns in association with arthropods. The objective of this publication is to review many of these factors and draw attention to their impact on microbial, specifically bacteria, activity associated with these remains as it is our contention that microbes serve as a primary mechanism regulating associated arthropod behavior. PMID:28538664

Abiotic versus biotic drivers of ocean pH variation under fast sea ice in McMurdo Sound, Antarctica.

Directory of Open Access Journals (Sweden)

Paul G Matson

Full Text Available Ocean acidification is expected to have a major effect on the marine carbonate system over the next century, particularly in high latitude seas. Less appreciated is natural environmental variation within these systems, particularly in terms of pH, and how this natural variation may inform laboratory experiments. In this study, we deployed sensor-equipped moorings at 20 m depths at three locations in McMurdo Sound, comprising deep (bottom depth>200 m: Hut Point Peninsula and shallow environments (bottom depth ∼25 m: Cape Evans and New Harbor. Our sensors recorded high-frequency variation in pH (Hut Point and Cape Evans only, tide (Cape Evans and New Harbor, and water mass properties (temperature and salinity during spring and early summer 2011. These collective observations showed that (1 pH differed spatially both in terms of mean pH (Cape Evans: 8.009±0.015; Hut Point: 8.020±0.007 and range of pH (Cape Evans: 0.090; Hut Point: 0.036, and (2 pH was not related to the mixing of two water masses, suggesting that the observed pH variation is likely not driven by this abiotic process. Given the large daily fluctuation in pH at Cape Evans, we developed a simple mechanistic model to explore the potential for biotic processes--in this case algal photosynthesis--to increase pH by fixing carbon from the water column. For this model, we incorporated published photosynthetic parameters for the three dominant algal functional groups found at Cape Evans (benthic fleshy red macroalgae, crustose coralline algae, and sea ice algal communities to estimate oxygen produced/carbon fixed from the water column underneath fast sea ice and the resulting pH change. These results suggest that biotic processes may be a primary driver of pH variation observed under fast sea ice at Cape Evans and potentially at other shallow sites in McMurdo Sound.

Abiotic versus biotic drivers of ocean pH variation under fast sea ice in McMurdo Sound, Antarctica.

Science.gov (United States)

Matson, Paul G; Washburn, Libe; Martz, Todd R; Hofmann, Gretchen E

2014-01-01

Ocean acidification is expected to have a major effect on the marine carbonate system over the next century, particularly in high latitude seas. Less appreciated is natural environmental variation within these systems, particularly in terms of pH, and how this natural variation may inform laboratory experiments. In this study, we deployed sensor-equipped moorings at 20 m depths at three locations in McMurdo Sound, comprising deep (bottom depth>200 m: Hut Point Peninsula) and shallow environments (bottom depth ∼25 m: Cape Evans and New Harbor). Our sensors recorded high-frequency variation in pH (Hut Point and Cape Evans only), tide (Cape Evans and New Harbor), and water mass properties (temperature and salinity) during spring and early summer 2011. These collective observations showed that (1) pH differed spatially both in terms of mean pH (Cape Evans: 8.009±0.015; Hut Point: 8.020±0.007) and range of pH (Cape Evans: 0.090; Hut Point: 0.036), and (2) pH was not related to the mixing of two water masses, suggesting that the observed pH variation is likely not driven by this abiotic process. Given the large daily fluctuation in pH at Cape Evans, we developed a simple mechanistic model to explore the potential for biotic processes--in this case algal photosynthesis--to increase pH by fixing carbon from the water column. For this model, we incorporated published photosynthetic parameters for the three dominant algal functional groups found at Cape Evans (benthic fleshy red macroalgae, crustose coralline algae, and sea ice algal communities) to estimate oxygen produced/carbon fixed from the water column underneath fast sea ice and the resulting pH change. These results suggest that biotic processes may be a primary driver of pH variation observed under fast sea ice at Cape Evans and potentially at other shallow sites in McMurdo Sound.

A promising future for integrative biodiversity research: an increased role of scale-dependency and functional biology

Science.gov (United States)

Schmitz, L.

2016-01-01

Studies into the complex interaction between an organism and changes to its biotic and abiotic environment are fundamental to understanding what regulates biodiversity. These investigations occur at many phylogenetic, temporal and spatial scales and within a variety of biological and geological disciplines but often in relative isolation. This issue focuses on what can be achieved when ecological mechanisms are integrated into analyses of deep-time biodiversity patterns through the union of fossil and extant data and methods. We expand upon this perspective to argue that, given its direct relevance to the current biodiversity crisis, greater integration is needed across biodiversity research. We focus on the need to understand scaling effects, how lower-level ecological and evolutionary processes scale up and vice versa, and the importance of incorporating functional biology. Placing function at the core of biodiversity research is fundamental, as it establishes how an organism interacts with its abiotic and biotic environment and it is functional diversity that ultimately determines important ecosystem processes. To achieve full integration, concerted and ongoing efforts are needed to build a united and interactive community of biodiversity researchers, with education and interdisciplinary training at its heart. PMID:26977068

A promising future for integrative biodiversity research: an increased role of scale-dependency and functional biology.

Science.gov (United States)

Price, S A; Schmitz, L

2016-04-05

Studies into the complex interaction between an organism and changes to its biotic and abiotic environment are fundamental to understanding what regulates biodiversity. These investigations occur at many phylogenetic, temporal and spatial scales and within a variety of biological and geological disciplines but often in relative isolation. This issue focuses on what can be achieved when ecological mechanisms are integrated into analyses of deep-time biodiversity patterns through the union of fossil and extant data and methods. We expand upon this perspective to argue that, given its direct relevance to the current biodiversity crisis, greater integration is needed across biodiversity research. We focus on the need to understand scaling effects, how lower-level ecological and evolutionary processes scale up and vice versa, and the importance of incorporating functional biology. Placing function at the core of biodiversity research is fundamental, as it establishes how an organism interacts with its abiotic and biotic environment and it is functional diversity that ultimately determines important ecosystem processes. To achieve full integration, concerted and ongoing efforts are needed to build a united and interactive community of biodiversity researchers, with education and interdisciplinary training at its heart. © 2016 The Author(s).

Alcohol dehydrogenase 1 (ADH1) confers both abiotic and biotic stress resistance in Arabidopsis.

Science.gov (United States)

Shi, Haitao; Liu, Wen; Yao, Yue; Wei, Yunxie; Chan, Zhulong

2017-09-01

Although the transcriptional regulation and upstream transcription factors of AtADH1 in response to abiotic stress are widely revealed, the in vivo roles of AtADH1 remain unknown. In this study, we found that the expression of AtADH1 was largely induced after salt, drought, cold and pathogen infection. Further studies found that AtADH1 overexpressing plants were more sensitive to abscisic acid (ABA) in comparison to wide type (WT), while AtADH1 knockout mutants showed no significant difference compared with WT in ABA sensitivity. Consistently, AtADH1 overexpressing plants showed improved stress resistance to salt, drought, cold and pathogen infection than WT, but the AtADH1 knockout mutants had no significant difference in abiotic and biotic stress resistance. Moreover, overexpression of AtADH1 expression increased the transcript levels of multiple stress-related genes, accumulation of soluble sugars and callose depositions. All these results indicate that AtADH1 confers enhanced resistance to both abiotic and biotic stresses. Copyright © 2017 Elsevier B.V. All rights reserved.

Relevance of biotic pathways to the long-term regulation of nuclear waste disposal. Estimation of radiation dose to man resulting from biotic transport: the BIOPORT/MAXI1 software package. Volume 5

Energy Technology Data Exchange (ETDEWEB)

McKenzie, D.H.; Cadwell, L.L.; Gano, K.A.; Kennedy, W.E. Jr.; Napier, B.A.; Peloquin, R.A.; Prohammer, L.A.; Simmons, M.A.

1985-10-01

BIOPORT/MAXI1 is a collection of five computer codes designed to estimate the potential magnitude of the radiation dose to man resulting from biotic transport processes. Dose to man is calculated for ingestion of agricultural crops grown in contaminated soil, inhalation of resuspended radionuclides, and direct exposure to penetrating radiation resulting from the radionuclide concentrations established in the available soil surface by the biotic transport model. This document is designed as both an instructional and reference document for the BIOPORT/MAXI1 computer software package and has been written for two major audiences. The first audience includes persons concerned with the mathematical models of biological transport of commercial low-level radioactive wastes and the computer algorithms used to implement those models. The second audience includes persons concerned with exercising the computer program and exposure scenarios to obtain results for specific applications. The report contains sections describing the mathematical models, user operation of the computer programs, and program structure. Input and output for five sample problems are included. In addition, listings of the computer programs, data libraries, and dose conversion factors are provided in appendices.

Relevance of biotic pathways to the long-term regulation of nuclear waste disposal. Estimation of radiation dose to man resulting from biotic transport: the BIOPORT/MAXI1 software package. Volume 5

International Nuclear Information System (INIS)

McKenzie, D.H.; Cadwell, L.L.; Gano, K.A.; Kennedy, W.E. Jr.; Napier, B.A.; Peloquin, R.A.; Prohammer, L.A.; Simmons, M.A.

1985-10-01

BIOPORT/MAXI1 is a collection of five computer codes designed to estimate the potential magnitude of the radiation dose to man resulting from biotic transport processes. Dose to man is calculated for ingestion of agricultural crops grown in contaminated soil, inhalation of resuspended radionuclides, and direct exposure to penetrating radiation resulting from the radionuclide concentrations established in the available soil surface by the biotic transport model. This document is designed as both an instructional and reference document for the BIOPORT/MAXI1 computer software package and has been written for two major audiences. The first audience includes persons concerned with the mathematical models of biological transport of commercial low-level radioactive wastes and the computer algorithms used to implement those models. The second audience includes persons concerned with exercising the computer program and exposure scenarios to obtain results for specific applications. The report contains sections describing the mathematical models, user operation of the computer programs, and program structure. Input and output for five sample problems are included. In addition, listings of the computer programs, data libraries, and dose conversion factors are provided in appendices

Effects of Abiotic and Biotic Stresses on the Internalization and Dissemination of Human Norovirus Surrogates in Growing Romaine Lettuce.

Science.gov (United States)

DiCaprio, Erin; Purgianto, Anastasia; Li, Jianrong

2015-07-01

Human norovirus (NoV) is the major causative agent of fresh-produce-related outbreaks of gastroenteritis; however, the ecology and persistence of human NoV in produce systems are poorly understood. In this study, the effects of abiotic and biotic stresses on the internalization and dissemination of two human NoV surrogates (murine norovirus 1 [MNV-1] and Tulane virus [TV]) in romaine lettuce were determined. To induce abiotic stress, romaine lettuce was grown under drought and flood conditions that mimic extreme weather events, followed by inoculation of soil with MNV-1 or TV. Independently, lettuce plants were infected with lettuce mosaic virus (LMV) to induce biotic stress, followed by inoculation with TV. Plants were grown for 14 days, and viral titers in harvested tissues were determined by plaque assays. It was found that drought stress significantly decreased the rates of both MNV-1 and TV internalization and dissemination. In contrast, neither flood stress nor biotic stress significantly impacted viral internalization or dissemination. Additionally, the rates of TV internalization and dissemination in soil-grown lettuce were significantly higher than those for MNV-1. Collectively, these results demonstrated that (i) human NoV surrogates can be internalized via roots and disseminated to shoots and leaves of romaine lettuce grown in soil, (ii) abiotic stress (drought) but not biotic stress (LMV infection) affects the rates of viral internalization and dissemination, and (iii) the type of virus affects the efficiency of internalization and dissemination. This study also highlights the need to develop effective measures to eliminate internalized viruses in fresh produce. Copyright © 2015, American Society for Microbiology. All Rights Reserved.

The role of biotic interactions in plant community assembly: What is the community species pool?

Czech Academy of Sciences Publication Activity Database

Švamberková, E.; Vítová, A.; Lepš, Jan

2017-01-01

Roč. 85, NOV 01 (2017), s. 150-156 ISSN 1146-609X Institutional support: RVO:60077344 Keywords : abiotic filter * biotic filter * competitive exclusion Subject RIV: EH - Ecology, Behaviour OBOR OECD: Ecology Impact factor: 1.652, year: 2016 http://www.sciencedirect.com/science/article/pii/S1146609X16303757

Measuring the degree of integration for an integrated service network

Directory of Open Access Journals (Sweden)

Chenglin Ye

2012-09-01

Full Text Available Background: Integration involves the coordination of services provided by autonomous agencies and improves the organization and delivery of multiple services for target patients. Current measures generally do not distinguish between agencies' perception and expectation. We propose a method for quantifying the agencies' service integration. Using the data from the Children's Treatment Network (CTN, we aimed to measure the degree of integration for the CTN agencies in York and Simcoe.  Theory and Methods: We quantified the integration by the agreement between perceived and expected levels of involvement and calculated four scores from different perspectives for each agency. We used the average score to measure the global network integration and examined the sensitivity of the global score.  Results: Most agencies' integration scores were less than 65%. As measured by the agreement between every other agency's perception and expectation, the overall integration of CTN in Simcoe and York was 44% (95% CI: 39% - 49% and 52% (95% CI: 48% - 56%, respectively. The sensitivity analysis showed that the global scores were robust.  Conclusion: Our method extends existing measures of integration and possesses a good extent of validity. We can also apply the method in monitoring improvement and linking integration with other outcomes.

Measuring the degree of integration for an integrated service network

Directory of Open Access Journals (Sweden)

Chenglin Ye

2012-09-01

Full Text Available Background: Integration involves the coordination of services provided by autonomous agencies and improves the organization and delivery of multiple services for target patients. Current measures generally do not distinguish between agencies' perception and expectation. We propose a method for quantifying the agencies' service integration. Using the data from the Children's Treatment Network (CTN, we aimed to measure the degree of integration for the CTN agencies in York and Simcoe. Theory and Methods: We quantified the integration by the agreement between perceived and expected levels of involvement and calculated four scores from different perspectives for each agency. We used the average score to measure the global network integration and examined the sensitivity of the global score. Results: Most agencies' integration scores were less than 65%. As measured by the agreement between every other agency's perception and expectation, the overall integration of CTN in Simcoe and York was 44% (95% CI: 39% - 49% and 52% (95% CI: 48% - 56%, respectively. The sensitivity analysis showed that the global scores were robust. Conclusion: Our method extends existing measures of integration and possesses a good extent of validity. We can also apply the method in monitoring improvement and linking integration with other outcomes. 

On the Expected Value of Fuzzy Events

Czech Academy of Sciences Publication Activity Database

Klement, E.P.; Mesiar, Radko

2015-01-01

Roč. 23, Supplement 1 (2015), s. 57-74 ISSN 0218-4885 Institutional support: RVO:67985556 Keywords : expected value * fuzzy event * Choquet integral Subject RIV: BA - General Mathematics Impact factor: 1.000, year: 2015 http://library.utia.cas.cz/separaty/2015/E/mesiar-0452568.pdf

Integrating speech in time depends on temporal expectancies and attention.

Science.gov (United States)

Scharinger, Mathias; Steinberg, Johanna; Tavano, Alessandro

2017-08-01

Sensory information that unfolds in time, such as in speech perception, relies on efficient chunking mechanisms in order to yield optimally-sized units for further processing. Whether or not two successive acoustic events receive a one-unit or a two-unit interpretation seems to depend on the fit between their temporal extent and a stipulated temporal window of integration. However, there is ongoing debate on how flexible this temporal window of integration should be, especially for the processing of speech sounds. Furthermore, there is no direct evidence of whether attention may modulate the temporal constraints on the integration window. For this reason, we here examine how different word durations, which lead to different temporal separations of sound onsets, interact with attention. In an Electroencephalography (EEG) study, participants actively and passively listened to words where word-final consonants were occasionally omitted. Words had either a natural duration or were artificially prolonged in order to increase the separation of speech sound onsets. Omission responses to incomplete speech input, originating in left temporal cortex, decreased when the critical speech sound was separated from previous sounds by more than 250 msec, i.e., when the separation was larger than the stipulated temporal window of integration (125-150 msec). Attention, on the other hand, only increased omission responses for stimuli with natural durations. We complemented the event-related potential (ERP) analyses by a frequency-domain analysis on the stimulus presentation rate. Notably, the power of stimulation frequency showed the same duration and attention effects than the omission responses. We interpret these findings on the background of existing research on temporal integration windows and further suggest that our findings may be accounted for within the framework of predictive coding. Copyright © 2017 Elsevier Ltd. All rights reserved.

SERDP ER-1376 Enhancement of In Situ Bioremediation of Energetic Compounds by Coupled Abiotic/Biotic Processes:Final Report for 2004 - 2006

Energy Technology Data Exchange (ETDEWEB)

Szecsody, James E.; Comfort, Steve; Fredrickson, Herbert L.; Boparai, Hardiljeet K.; Devary, Brooks J.; Thompson, Karen T.; Phillips, Jerry L.; Crocker, Fiona H.; Girvin, Donald C.; Resch, Charles T.; Shea, Patrick; Fischer, Ashley E.; Durkin, Lisa M.

2007-08-07

This project was initiated by SERDP to quantify processes and determine the effectiveness of abiotic/biotic mineralization of energetics (RDX, HMX, TNT) in aquifer sediments by combinations of biostimulation (carbon, trace nutrient additions) and chemical reduction of sediment to create a reducing environment. Initially it was hypothesized that a balance of chemical reduction of sediment and biostimulation would increase the RDX, HMX, and TNT mineralization rate significantly (by a combination of abiotic and biotic processes) so that this abiotic/biotic treatment may be a more efficient for remediation than biotic treatment alone in some cases. Because both abiotic and biotic processes are involved in energetic mineralization in sediments, it was further hypothesized that consideration for both abiotic reduction and microbial growth was need to optimize the sediment system for the most rapid mineralization rate. Results show that there are separate optimal abiotic/biostimulation aquifer sediment treatments for RDX/HMX and for TNT. Optimal sediment treatment for RDX and HMX (which have chemical similarities and similar degradation pathways) is mainly chemical reduction of sediment, which increased the RDX/HMX mineralization rate 100 to150 times (relative to untreated sediment), with additional carbon or trace nutrient addition, which increased the RDX/HMX mineralization rate an additional 3 to 4 times. In contrast, the optimal aquifer sediment treatment for TNT involves mainly biostimulation (glucose addition), which stimulates a TNT/glucose cometabolic degradation pathway (6.8 times more rapid than untreated sediment), degrading TNT to amino-intermediates that irreversibly sorb (i.e., end product is not CO2). The TNT mass migration risk is minimized by these transformation reactions, as the triaminotoluene and 2,4- and 2,6-diaminonitrotoluene products that irreversibly sorb are no longer mobile in the subsurface environment. These transformation rates are increased

Importance of biotic and abiotic components in feedback between plants and soil

OpenAIRE

Hanzelková, Věra

2017-01-01

The plant-soil feedback affects the forming of a plant community. Plants affect their own species as well as other species. The plant-soil feedback can be both positive and negative. Plants affect soil, change its properties, and the soil affects the plants reciprocally. Soil components can be divided into biotic and abiotic ones. The abiotic component is represented by physical and chemical properties of the soil. The main properties are the soil structure, the soil moisture, the soil temper...

Integrating Biogeography with Contemporary Niche Theory.

Science.gov (United States)

Godsoe, William; Jankowski, Jill; Holt, Robert D; Gravel, Dominique

2017-07-01

There is no consensus on when biotic interactions impact the range limits of species. Starting from MacArthur's use of invasibility to understand how biotic interactions influence coexistence, here we examine how biotic interactions shape species distributions. Range limits emerge from how birth, death, and movement rates vary with the environment. We clarify some basic issues revolving around niche definitions, illustrated with simple resource-consumer theory. We then highlight two different avenues for linking community theory and range theory; the first based on calculating the effects of biotic interactions on range limits across scales and landscape configurations, and the second based on aggregate measures of diffuse interactions and network strength. We conclude with suggestions for a future research agenda. Copyright © 2017 Elsevier Ltd. All rights reserved.

Molecular Analysis of Rice CIPKs Involved in Both Biotic and Abiotic Stress Responses

Institute of Scientific and Technical Information of China (English)

CHEN Xi-feng; Gu Zhi-min; LIU Feng; MA Bo-jun; ZHANG Hong-sheng

2011-01-01

Plant calcineurin B-like (CBL) proteins have been proposed as important Ca2+ sensors and specifically interact with CBL-interacting protein kinases (CIPKs) in plant-specific calcium signaling.Here,we identified and isolated 15 CIPK genes in a japonica rice variety Nipponbare based on the predicted sequences of rice CIPK gene family.Gene structure analysis showed that these 15 genes were divided into intron-less and intron-rich groups,and OsCIPK3 and OsCIPK24 exhibited alternative splicing in their mature process.The phylogenetic analyses indicated that rice CIPKs shared an ancestor with Arabidopsis and poplar CIPKs.Analyses of gene expression showed that these OsCIPK genes were differentially induced by biotic stresses such as bacterial blight and abiotic stresses (heavy metal such as Hg2+,high salinity,cold and ABA).Interestingly,five OsCIPK genes,OsCIPK1,2,10,11 and 12,were transcriptionally up-regulated after bacterial blight infection whereas four OsCIPK genes,OsCIPK2,10,11 and 14,were induced by all treatments,indicating that some of OsCIPK genes are involved in multiple stress response pathways in plants.Our finding suggests that CIPKs play a key role in both biotic and abiotic stress responses.

When should we expect microbial phenotypic traits to predict microbial abundances?

Directory of Open Access Journals (Sweden)

Jeremy W. Fox

2012-08-01

Full Text Available Species’ phenotypic traits may predict their relative abundances. Intuitively, this is because locally-abundant species have traits making them well adapted to local abiotic and biotic conditions, while locally-rare species are not as well-adapted. But this intuition may not be valid. If competing species vary in how well-adapted they are to local conditions, why doesn’t the best-adapted species simply exclude the others entirely? But conversely, if species exhibit niche differences that allow them to coexist, then by definition there is no single best adapted species. Rather, demographic rates depend on species’ relative abundances, so that phenotypic traits conferring high adaptedness do not necessarily confer high abundance. I illustrate these points using a simple theoretical model incorporating adjustable levels of "adaptedness" and "niche differences". Even very small niche differences can weaken or even reverse the expected correlation between adaptive traits and abundance. Conversely, adaptive traits confer high abundance when niche differences are very strong. Future work should be directed towards understanding the link between phenotypic traits and frequency-dependence of demographic rates.

When should we expect microbial phenotypic traits to predict microbial abundances?

Science.gov (United States)

Fox, Jeremy W

2012-01-01

Species' phenotypic traits may predict their relative abundances. Intuitively, this is because locally abundant species have traits making them well-adapted to local abiotic and biotic conditions, while locally rare species are not as well-adapted. But this intuition may not be valid. If competing species vary in how well-adapted they are to local conditions, why doesn't the best-adapted species simply exclude the others entirely? But conversely, if species exhibit niche differences that allow them to coexist, then by definition there is no single best adapted species. Rather, demographic rates depend on species' relative abundances, so that phenotypic traits conferring high adaptedness do not necessarily confer high abundance. I illustrate these points using a simple theoretical model incorporating adjustable levels of "adaptedness" and "niche differences." Even very small niche differences can weaken or even reverse the expected correlation between adaptive traits and abundance. Conversely, adaptive traits confer high abundance when niche differences are very strong. Future work should be directed toward understanding the link between phenotypic traits and frequency-dependence of demographic rates.

Robust RNA silencing-mediated resistance to Plum pox virus under variable abiotic and biotic conditions.

Science.gov (United States)

Di Nicola, Elisa; Tavazza, Mario; Lucioli, Alessandra; Salandri, Laura; Ilardi, Vincenza

2014-10-01

Some abiotic and biotic conditions are known to have a negative impact on post-transcriptional gene silencing (PTGS), thus representing a potential concern for the production of stable engineered virus resistance traits. However, depending on the strategy followed to achieve PTGS of the transgene, different responses to external conditions can be expected. In the present study, we utilized the Nicotiana benthamiana–Plum pox virus (PPV) pathosystem to evaluate in detail the stability of intron-hairpin(ihp)-mediated virus resistance under conditions known to adversely affect PTGS. The ihp plants grown at low or high temperatures were fully resistant to multiple PPV challenges, different PPV inoculum concentrations and even to a PPV isolate differing from the ihp construct by more than 28% at the nucleotide level. In addition, infections of ihp plants with viruses belonging to Cucumovirus, Potyvirus or Tombusvirus, all known to affect PTGS at different steps, were not able to defeat PPV resistance. Low temperatures did not affect the accumulation of transgenic small interfering RNAs (siRNAs), whereas a clear increase in the amount of siRNAs was observed during infections sustained by Cucumber mosaic virus and Potato virus Y. Our results show that the above stress factors do not represent an important concern for the production,through ihp-PTGS technology, of transgenic plants having robust virus resistance traits.

Development and validation of a terrestrial biotic ligand model predicting the effect of cobalt on root growth of barley (Hordeum vulgare)

International Nuclear Information System (INIS)

Lock, K.; De Schamphelaere, K.A.C.; Becaus, S.; Criel, P.; Van Eeckhout, H.; Janssen, C.R.

2007-01-01

A Biotic Ligand Model was developed predicting the effect of cobalt on root growth of barley (Hordeum vulgare) in nutrient solutions. The extent to which Ca 2+ , Mg 2+ , Na + , K + ions and pH independently affect cobalt toxicity to barley was studied. With increasing activities of Mg 2+ , and to a lesser extent also K + , the 4-d EC50 Co2+ increased linearly, while Ca 2+ , Na + and H + activities did not affect Co 2+ toxicity. Stability constants for the binding of Co 2+ , Mg 2+ and K + to the biotic ligand were obtained: log K CoBL = 5.14, log K MgBL = 3.86 and log K KBL = 2.50. Limited validation of the model with one standard artificial soil and one standard field soil showed that the 4-d EC50 Co2+ could only be predicted within a factor of four from the observed values, indicating further refinement of the BLM is needed. - Biotic Ligand Models are not only a useful tool to assess metal toxicity in aquatic systems but can also be used for terrestrial plants

Believing is seeing: an evolving research program on patients' psychotherapy expectations.

Science.gov (United States)

Constantino, Michael J

2012-01-01

In this article I discuss one facet of my evolving research program focused on patients' psychotherapy-related expectations. Although generally considered a common psychotherapeutic factor, expectations have been historically undervalued conceptually, empirically, and clinically. Attempting to somewhat redress this slight, I will (a) define the various forms of patients' psychotherapy-related expectations, (b) present relevant findings from research that my colleagues, students, and I have conducted, (c) summarize an integrative psychotherapy approach that underscores expectations as an explanatory construct for patients' corrective experiences, and (d) highlight future research directions for increasing our understanding of the nature and functions of the expectancy construct.

The WRKY transcription factors in the diploid woodland strawberry Fragaria vesca: Identification and expression analysis under biotic and abiotic stresses.

Science.gov (United States)

Wei, Wei; Hu, Yang; Han, Yong-Tao; Zhang, Kai; Zhao, Feng-Li; Feng, Jia-Yue

2016-08-01

WRKY proteins comprise a large family of transcription factors that play important roles in response to biotic and abiotic stresses and in plant growth and development. To date, little is known about the WRKY gene family in strawberry. In this study, we identified 62 WRKY genes (FvWRKYs) in the wild diploid woodland strawberry (Fragaria vesca, 2n = 2x = 14) accession Heilongjiang-3. According to the phylogenetic analysis and structural features, these identified strawberry FvWRKY genes were classified into three main groups. In addition, eight FvWRKY-GFP fusion proteins showed distinct subcellular localizations in Arabidopsis mesophyll protoplasts. Furthermore, we examined the expression of the 62 FvWRKY genes in 'Heilongjiang-3' under various conditions, including biotic stress (Podosphaera aphanis), abiotic stresses (drought, salt, cold, and heat), and hormone treatments (abscisic acid, ethephon, methyl jasmonate, and salicylic acid). The expression levels of 33 FvWRKY genes were upregulated, while 12 FvWRKY genes were downregulated during powdery mildew infection. FvWRKY genes responded to drought and salt treatment to a greater extent than to temperature stress. Expression profiles derived from quantitative real-time PCR suggested that 11 FvWRKY genes responded dramatically to various stimuli at the transcriptional level, indicating versatile roles in responses to biotic and abiotic stresses. Interaction networks revealed that the crucial pathways controlled by WRKY proteins may be involved in the differential response to biotic stress. Taken together, the present work may provide the basis for future studies of the genetic modification of WRKY genes for pathogen resistance and stress tolerance in strawberry. Copyright © 2016 Elsevier Masson SAS. All rights reserved.

Utilizing genetic resources and precision agriculture to enhance resistance to biotic and abiotic stress in watermelon

Science.gov (United States)

Originally from Africa, watermelon is a staple crop in South Carolina and rich source of important phytochemicals that promote human health. As a result of many years of domestication and selection for desired fruit quality, modern watermelon cultivars are susceptible to biotic and abiotic stress. T...

A comparative study of expectant parents ' childbirth expectations.

Science.gov (United States)

Kao, Bi-Chin; Gau, Meei-Ling; Wu, Shian-Feng; Kuo, Bih-Jaw; Lee, Tsorng-Yeh

2004-09-01

The purpose of this study was to understand childbirth expectations and differences in childbirth expectations among expectant parents. For convenience sampling, 200 couples willing to participate in this study were chosen from two hospitals in central Taiwan. Inclusion criteria were at least 36 weeks of gestation, aged 18 and above, no prenatal complications, and willing to consent to participate in this study. Instruments used to collect data included basic demographic data and the Childbirth Expectations Questionnaire. Findings of the study revealed that (1) five factors were identified by expectant parents regarding childbirth expectations including the caregiving environment, expectation of labor pain, spousal support, control and participation, and medical and nursing support; (2) no general differences were identified in the childbirth expectations between expectant fathers and expectant mothers; and (3) expectant fathers with a higher socioeconomic status and who had received prenatal (childbirth) education had higher childbirth expectations, whereas mothers displayed no differences in demographic characteristics. The study results may help clinical healthcare providers better understand differences in expectations during labor and birth and childbirth expectations by expectant parents in order to improve the medical and nursing system and promote positive childbirth experiences and satisfaction for expectant parents.

Overexpression of a Pathogenesis-Related Protein 10 Enhances Biotic and Abiotic Stress Tolerance in Rice

Directory of Open Access Journals (Sweden)

Jingni Wu

2016-12-01

Full Text Available Pathogenesis-related proteins play multiple roles in plant development and biotic and abiotic stress tolerance. Here, we characterize a rice defense related gene named “jasmonic acid inducible pathogenesis-related class 10” (JIOsPR10 to gain an insight into its functional properties. Semi-quantitative RT-PCR analysis showed up-regulation of JIOsPR10 under salt and drought stress conditions. Constitutive over-expression JIOsPR10 in rice promoted shoot and root development in transgenic plants, however, their productivity was unaltered. Further experiments exhibited that the transgenic plants showed reduced susceptibility to rice blast fungus, and enhanced salt and drought stress tolerance as compared to the wild type. A comparative proteomic profiling of wild type and transgenic plants showed that overexpression of JIOsPR10 led to the differential modulation of several proteins mainly related with oxidative stresses, carbohydrate metabolism, and plant defense. Taken together, our findings suggest that JIOsPR10 plays important roles in biotic and abiotic stresses tolerance probably by activation of stress related proteins.

Seed dispersers, seed predators, and browsers act synergistically as biotic filters in a mosaic landscape.

Directory of Open Access Journals (Sweden)

Regino Zamora

Full Text Available In this study, we analize the functional influence of animals on the plants they interact with in a mediterranean mountain. We hypothesise that seed dispersers, seed predators, and browsers can act as biotic filters for plant communities. We analyse the combined effects of mutualistic (seed dispersal and antagonistic (seed predation, herbivory animal interactions in a mosaic landscape of Mediterranean mountains, basing our results on observational and experimental field. Most of the dispersed seeds came from tree species, whereas the population of saplings was composed predominantly of zoochorous shrub species. Seed predators preferentially consumed seeds from tree species, whereas seeds from the dominant fleshy-fruited shrubs had a higher probability of escaping these predators. The same pattern was repeated among the different landscape units by browsers, since they browsed selectively and far more intensely on tree-species saplings than on the surrounding shrubs. In synthesis, our work identifies the major biotic processes that appear to be favoring a community dominated by shrubs versus trees because seed dispersers, predators, and herbivores together favored shrub dispersal and establishment versus trees.

Desertification, salinization, and biotic homogenization in a dryland river ecosystem

Science.gov (United States)

Miyazono, S.; Patino, Reynaldo; Taylor, C.M.

2015-01-01

This study determined long-term changes in fish assemblages, river discharge, salinity, and local precipitation, and examined hydrological drivers of biotic homogenization in a dryland river ecosystem, the Trans-Pecos region of the Rio Grande/Rio Bravo del Norte (USA/Mexico). Historical (1977-1989) and current (2010-2011) fish assemblages were analyzed by rarefaction analysis (species richness), nonmetric multidimensional scaling (composition/variability), multiresponse permutation procedures (composition), and paired t-test (variability). Trends in hydrological conditions (1970s-2010s) were examined by Kendall tau and quantile regression, and associations between streamfiow and specific conductance (salinity) by generalized linear models. Since the 1970s, species richness and variability of fish assemblages decreased in the Rio Grande below the confluence with the Rio Conchos (Mexico), a major tributary, but not above it. There was increased representation of lower-flow/higher-salinity tolerant species, thus making fish communities below the confluence taxonomically and functionally more homogeneous to those above it. Unlike findings elsewhere, this biotic homogenization was due primarily to changes in the relative abundances of native species. While Rio Conchos discharge was > 2-fold higher than Rio Grande discharge above their confluence, Rio Conchos discharge decreased during the study period causing Rio Grande discharge below the confluence to also decrease. Rio Conchos salinity is lower than Rio Grande salinity above their confluence and, as Rio Conchos discharge decreased, it caused Rio Grande salinity below the confluence to increase (reduced dilution). Trends in discharge did not correspond to trends in precipitation except at extreme-high (90th quantile) levels. In conclusion, decreasing discharge from the Rio Conchos has led to decreasing flow and increasing salinity in the Rio Grande below the confluence. This spatially uneven desertification and

Biotic stress shifted structure and abundance of Enterobacteriaceae in the lettuce microbiome.

Science.gov (United States)

Erlacher, Armin; Cardinale, Massimiliano; Grube, Martin; Berg, Gabriele

2015-01-01

Lettuce cultivars are not only amongst the most popular vegetables eaten raw, they are also involved in severe pathogen outbreaks world-wide. While outbreaks caused by Enterobacteriaceae species are well-studied, less is known about their occurrence in natural environments as well as the impact of biotic stress. Here, we studied the ecology of the human health-relevant bacterial family Enterobacteriaceae and assessed the impact of biotic disturbances by a soil-borne phytopathogenic fungus and Gastropoda on their structure and abundance in mesocosm and pot experiments. Using a polyphasic approach including network analyses of 16S rRNA gene amplicon libraries, quantitative PCR and complementary fluorescence in situ hybridization (FISH) microscopy we found substantial yet divergent Enterobacteriaceae communities. A similar spectrum of 14 genera was identified from rhizo- and phyllospheres but the abundance of Enterobacteriaceae was on average 3fold higher in phyllosphere samples. Both stress factors shifted the bacterial community of the leaf habitat, characterized by increases of species abundance and diversity. For the rhizosphere, we observed significant structural shifts of Enterobacteriaceae communities but also a high degree of resilience. These results could be confirmed by FISH microscopy but it was difficult to visualize phyllosphere communities. Additional inoculation experiments with Escherichia coli as model revealed their presence below the wax layer as well as in the endosphere of leaves. The observed presence influenced by stress factors and the endophytic life style of Enterobacteriaceae on lettuce can be an important aspect in relation to human health.

Testing the efficiency of temperate benthic biotic indices in assessing the ecological status of a tropical ecosystem

Digital Repository Service at National Institute of Oceanography (India)

Sivadas, S.K.; Nagesh, R.; Gupta, G.V.M.; Gaonkar, U.V.; Mukherjee, I.; Ramteke, D.; Ingole, B.S.

. Borja, A., Franco, J., Pérez, V., Environment, M., Perez, V., 2000. A marine biotic index to etablish the ecological quality of soft bottom benthos within european estuarine and coastal environnements. Mar. Pollut. Bull. 40, 1100–1114. doi:10.1016/S...

Transcriptomic responses to biotic stresses in Malus x domestica: a meta-analysis study

OpenAIRE

Balan, Bipin; Marra, Francesco Paolo; Caruso, Tiziano; Martinelli, Federico

2018-01-01

RNA-Seq analysis is a strong tool to gain insight into the molecular responses to biotic stresses in plants. The objective of this work is to identify specific and common molecular responses between different transcriptomic data related to fungi, virus and bacteria attacks in Malus x domestica. We analyzed seven transcriptomic datasets in Malus x domestica divided in responses to fungal pathogens, virus (Apple Stem Grooving Virus) and bacteria (Erwinia amylovora). Data were dissected using an...

Climate, trees, pests, and weeds: Change, uncertainty, and biotic stressors in eastern US national park forests

Science.gov (United States)

Nicholas A. Fisichelli; Scott R. Abella; Matthew Peters; Frank J. Krist

2014-01-01

The US National Park Service (NPS) manages over 8900 km2 of forest area in the eastern United States where climate change and nonnative species are altering forest structure, composition, and processes. Understanding potential forest change in response to climate, differences in habitat projections among models (uncertainty), and nonnative biotic...

Testing strength of biotic resistance against an introduced fish: inter-specific competition or predation through facultative piscivory?

Directory of Open Access Journals (Sweden)

J Robert Britton

Full Text Available Biotic resistance is the process where aspects of the receiving environment inhibit the establishment and invasion of an introduced species. Resistance against an introduced fish can be through strong competition and/or predation from resident fishes. Here, the biotic resistance against introduced topmouth gudgeon Pseudorasbora parva (a highly invasive fish in Europe by resident carp Cyprinus carpio was tested in experimental mesocosms. The introduction scenario was six adult P. parva (three male, three female on a single occasion. Resistance to their establishment was provided by three and six resident C. carpio whose effects on P. parva growth and reproduction were compared to a Control (no resident fish at the time of introduction and treatments containing three and six P. parva. After 120 days, the growth rates of the introduced P. parva were significantly depressed in C. carpio presence and in mesocosms with three C. carpio present, significantly decreased numbers of 0+P. parva were recorded. Where six C. carpio were present, no 0+P. parva were recorded, indicating resistance strength increased with carp abundance. In contrast, there were no differences in P. parva reproduction and growth rates between the Control and treatments containing conspecifics. Stable isotope analysis (δ(15N, δ(13C revealed C. carpio were feeding at one trophic level above 0+P. parva, suggesting the process of resistance was predation (facultative piscivory rather than competition. Thus, if P. parva are to establish and invade following an introduction, they must overcome this biotic resistance from cyprinid fishes such as C. carpio.

Effective field equations for expectation values

International Nuclear Information System (INIS)

Jordan, R.D.

1986-01-01

We discuss functional methods which allow calculation of expectation values, rather than the usual in-out amplitudes, from a path integral. The technique, based on Schwinger's idea of summing over paths which go from the past to the future and then back to the past, provides effective field equations satisfied by the expectation value of the field. These equations are shown to be real and causal for a general theory up to two-loop order, and unitarity is checked to this order. These methods are applied to a simple quantum-mechanical example to illustrate the differences between the new formalism and the standard theory. When applied to the gravitational field, the new effective field equations should be useful for studies of quantum cosmology

Invasion by nonnative brook trout in Panther Creek, Idaho: Roles of habitat quality, connectivity, and biotic resistance

Science.gov (United States)

Joseph R. Benjamin

2006-01-01

Theoretical models suggest the invasion of nonnative freshwater species is facilitated through the interaction of three factors: biotic resistance, habitat quality, and connectivity. We measured variables that represented each component to determine which were associated with small (150 mm) brook trout occurrence in Panther Creek, a tributary...

Temperature sensitivity indicates that chlorination of organic matter in forest soil is primarily biotic.

Science.gov (United States)

Bastviken, David; Svensson, Teresia; Karlsson, Susanne; Sandén, Per; Oberg, Gunilla

2009-05-15

Old assumptions that chloride is inert and that most chlorinated organic matter in soils is anthropogenic have been challenged by findings of naturally formed organochlorines. Such natural chlorination has been recognized for several decades, but there are still very few measurements of chlorination rates or estimates of the quantitative importance of terrestrial chlorine transformations. While much is known about the formation of specific compounds, bulk chlorination remains poorly understood in terms of mechanisms and effects of environmental factors. We quantified bulk chlorination rates in coniferous forest soil using 36Cl-chloride in tracer experiments at different temperatures and with and without molecular oxygen (O2). Chlorination was enhanced by the presence of O2 and had a temperature optimum at 20 degrees C. Minimum rates were found at high temperatures (50 degrees C) or under anoxic conditions. The results indicate (1) that most of the chlorination between 4 and 40 degrees C was biotic and driven by O2 dependent enzymes, and (2) that there is also slower background chlorination occurring under anoxic conditions at 20 degrees C and under oxic conditions at 50 degrees C. Hence, while oxic and biotic chlorination clearly dominated, chlorination by other processes including possible abiotic reactions was also detected.

Dissolved and labile concentrations of Cd, Cu, Pb, and Zn in the South Fork Coeur d'Alene River, Idaho: Comparisons among chemical equilibrium models and implications for biotic ligand models

Science.gov (United States)

Balistrieri, L.S.; Blank, R.G.

2008-01-01

In order to evaluate thermodynamic speciation calculations inherent in biotic ligand models, the speciation of dissolved Cd, Cu, Pb, and Zn in aquatic systems influenced by historical mining activities is examined using equilibrium computer models and the diffusive gradients in thin films (DGT) technique. Several metal/organic-matter complexation models, including WHAM VI, NICA-Donnan, and Stockholm Humic model (SHM), are used in combination with inorganic speciation models to calculate the thermodynamic speciation of dissolved metals and concentrations of metal associated with biotic ligands (e.g., fish gills). Maximum dynamic metal concentrations, determined from total dissolved metal concentrations and thermodynamic speciation calculations, are compared with labile metal concentrations measured by DGT to assess which metal/organic-matter complexation model best describes metal speciation and, thereby, biotic ligand speciation, in the studied systems. Results indicate that the choice of model that defines metal/organic-matter interactions does not affect calculated concentrations of Cd and Zn associated with biotic ligands for geochemical conditions in the study area, whereas concentrations of Cu and Pb associated with biotic ligands depend on whether the speciation calculations use WHAM VI, NICA-Donnan, or SHM. Agreement between labile metal concentrations and dynamic metal concentrations occurs when WHAM VI is used to calculate Cu speciation and SHM is used to calculate Pb speciation. Additional work in systems that contain wide ranges in concentrations of multiple metals should incorporate analytical speciation methods, such as DGT, to constrain the speciation component of biotic ligand models. ?? 2008 Elsevier Ltd.

A Model of Continental Growth and Mantle Degassing Comparing Biotic and Abiotic Worlds

Science.gov (United States)

Höning, D.; Hansen-Goos, H.; Spohn, T.

2012-12-01

the phase area where the net degassing and continental growth rates are zero. Many of the parameter combinations result in one stable fixed point with a completely dry mantle that lacks continents altogether and a second stable fixed point with a continent coverage and mantle water concentration close to that of the present Earth. In addition, there is an unstable fixed point situated between the two. In general, the abiotic world has a larger zone of attraction for the fixed point with a dry mantle and no continents than the biotic world. Thus a biotic world is found to be more likely to develop continents and a have wet mantle. Furthermore, the biotic model is generally found to have a wetter mantle than an abiotic model with the same continent coverage. Through the effect of water on the mantle rheology, the biotic world would thus tend to be tectonically more active and have a more rapid long-term carbon silicate cycle. References: J. Kim, H. Dong, J. Seabaugh, S. W. Newell, D. D. Eberl, Science 303, 830-832, 2004 N. H. Sleep, D. K. Bird, E. Pope, Annu. Rev. Earth Planet. Sci. 40, 277-300, 2012 M. T. Rosing, D. K. Bird, N. H. Sleep, W. Glassley, F. Albarede, Paleo3 232, 90-113, 2006

Biotic Stress Shifted Structure and Abundance of Enterobacteriaceae in the Lettuce Microbiome

Science.gov (United States)

Erlacher, Armin; Cardinale, Massimiliano; Grube, Martin; Berg, Gabriele

2015-01-01

Lettuce cultivars are not only amongst the most popular vegetables eaten raw, they are also involved in severe pathogen outbreaks world-wide. While outbreaks caused by Enterobacteriaceae species are well-studied, less is known about their occurrence in natural environments as well as the impact of biotic stress. Here, we studied the ecology of the human health-relevant bacterial family Enterobacteriaceae and assessed the impact of biotic disturbances by a soil-borne phytopathogenic fungus and Gastropoda on their structure and abundance in mesocosm and pot experiments. Using a polyphasic approach including network analyses of 16S rRNA gene amplicon libraries, quantitative PCR and complementary fluorescence in situ hybridization (FISH) microscopy we found substantial yet divergent Enterobacteriaceae communities. A similar spectrum of 14 genera was identified from rhizo- and phyllospheres but the abundance of Enterobacteriaceae was on average 3fold higher in phyllosphere samples. Both stress factors shifted the bacterial community of the leaf habitat, characterized by increases of species abundance and diversity. For the rhizosphere, we observed significant structural shifts of Enterobacteriaceae communities but also a high degree of resilience. These results could be confirmed by FISH microscopy but it was difficult to visualize phyllosphere communities. Additional inoculation experiments with Escherichia coli as model revealed their presence below the wax layer as well as in the endosphere of leaves. The observed presence influenced by stress factors and the endophytic life style of Enterobacteriaceae on lettuce can be an important aspect in relation to human health. PMID:25714833

Biotic stress shifted structure and abundance of Enterobacteriaceae in the lettuce microbiome.

Directory of Open Access Journals (Sweden)

Armin Erlacher

Full Text Available Lettuce cultivars are not only amongst the most popular vegetables eaten raw, they are also involved in severe pathogen outbreaks world-wide. While outbreaks caused by Enterobacteriaceae species are well-studied, less is known about their occurrence in natural environments as well as the impact of biotic stress. Here, we studied the ecology of the human health-relevant bacterial family Enterobacteriaceae and assessed the impact of biotic disturbances by a soil-borne phytopathogenic fungus and Gastropoda on their structure and abundance in mesocosm and pot experiments. Using a polyphasic approach including network analyses of 16S rRNA gene amplicon libraries, quantitative PCR and complementary fluorescence in situ hybridization (FISH microscopy we found substantial yet divergent Enterobacteriaceae communities. A similar spectrum of 14 genera was identified from rhizo- and phyllospheres but the abundance of Enterobacteriaceae was on average 3fold higher in phyllosphere samples. Both stress factors shifted the bacterial community of the leaf habitat, characterized by increases of species abundance and diversity. For the rhizosphere, we observed significant structural shifts of Enterobacteriaceae communities but also a high degree of resilience. These results could be confirmed by FISH microscopy but it was difficult to visualize phyllosphere communities. Additional inoculation experiments with Escherichia coli as model revealed their presence below the wax layer as well as in the endosphere of leaves. The observed presence influenced by stress factors and the endophytic life style of Enterobacteriaceae on lettuce can be an important aspect in relation to human health.

Physical integrity: the missing link in biological monitoring and TMDLs.

Science.gov (United States)

Asmus, Brenda; Magner, Joseph A; Vondracek, Bruce; Perry, Jim

2009-12-01

The Clean Water Act mandates that the chemical, physical, and biological integrity of our nation's waters be maintained and restored. Physical integrity has often been defined as physical habitat integrity, and as such, data collected during biological monitoring programs focus primarily on habitat quality. However, we argue that channel stability is a more appropriate measure of physical integrity and that channel stability is a foundational element of physical habitat integrity in low-gradient alluvial streams. We highlight assessment tools that could supplement stream assessments and the Total Maximum Daily Load stressor identification process: field surveys of bankfull cross-sections; longitudinal thalweg profiles; particle size distribution; and regionally calibrated, visual, stream stability assessments. Benefits of measuring channel stability include a more informed selection of reference or best attainable stream condition for an Index of Biotic Integrity, establishment of a baseline for monitoring changes in present and future condition, and indication of channel stability for investigations of chemical and biological impairments associated with sediment discontinuity and loss of habitat quality.

Coupling effects of abiotic and biotic factors on molecular composition of dissolved organic matter in a freshwater wetland

Energy Technology Data Exchange (ETDEWEB)

He, Wei [Department of Environment and Energy, Sejong University, Seoul 143-747 (Korea, Republic of); Choi, Ilhwan [Water Analysis and Research Center, K-water, 560 Sintanjin-ro, Daedeok-gu, Daejeon 307-711 (Korea, Republic of); Lee, Jung-Joon [Department of Biological Education, Daegu University, Gyungbuk 712-714 (Korea, Republic of); Hur, Jin, E-mail: jinhur@sejong.ac.kr [Department of Environment and Energy, Sejong University, Seoul 143-747 (Korea, Republic of)

2016-02-15

In this study, temporal and spatial variations in five defined molecular size fractions of dissolved organic matter (DOM) were examined for a well preserved wetland (Upo Wetland) and its surrounding areas, and the influencing factors were explored with many biotic and abioic parameters. For each DOM sample, the five size fractions were determined by size-exclusion chromatography coupled with organic carbon detector (SEC-OCD). For 2-year long monthly monitoring, bio-polymers (BP), humic substances (HS), building blocks (BB), low molecular-weight (LMW) neutrals, and LMW acids displayed the median values of 264, 1884, 1070, 1090, and 11 μg-C L{sup −1}, respectively, accounting for 6.2%, 41.7%, 24.5%, 26.4%, and 0.4% of dissolved organic carbon (DOC). The dominant presence of HS indicated that terrestrial input played important roles in DOM composition of the freshwater ecosystem, which contrasted with coastal wetlands in other reports. Both seasonal and periodic patterns in the variations were found only for HS and BB among the size fractions. It was also notable that the sources of HS were seasonally shifted from aquagenic origin in winter to pedogenic origin in summer. The correlations among the size fractions revealed that BB and LMW neutrals might be degradation products from HS and humic-like substances (HS + BB), respectively, while LMW acids, from LMW neutrals. Principle component analysis revealed that the humic-like substances and the aromaticity of DOM were associated with temperature, chlorophyll a, phosphorous, and rainfall, whereas the other fractions and the molecular weight of HS were primarily affected by solar irradiation. Significant correlations between DOM composition and some biotic factors further suggested that DOM may even affect the biological communities, which provides an insight into the potential coupling effects of biotic and abiotic factors on DOM molecular composition in freshwater wetlands. - Highlights: • Humic fractions varied

Coupling effects of abiotic and biotic factors on molecular composition of dissolved organic matter in a freshwater wetland

International Nuclear Information System (INIS)

He, Wei; Choi, Ilhwan; Lee, Jung-Joon; Hur, Jin

2016-01-01

In this study, temporal and spatial variations in five defined molecular size fractions of dissolved organic matter (DOM) were examined for a well preserved wetland (Upo Wetland) and its surrounding areas, and the influencing factors were explored with many biotic and abioic parameters. For each DOM sample, the five size fractions were determined by size-exclusion chromatography coupled with organic carbon detector (SEC-OCD). For 2-year long monthly monitoring, bio-polymers (BP), humic substances (HS), building blocks (BB), low molecular-weight (LMW) neutrals, and LMW acids displayed the median values of 264, 1884, 1070, 1090, and 11 μg-C L"−"1, respectively, accounting for 6.2%, 41.7%, 24.5%, 26.4%, and 0.4% of dissolved organic carbon (DOC). The dominant presence of HS indicated that terrestrial input played important roles in DOM composition of the freshwater ecosystem, which contrasted with coastal wetlands in other reports. Both seasonal and periodic patterns in the variations were found only for HS and BB among the size fractions. It was also notable that the sources of HS were seasonally shifted from aquagenic origin in winter to pedogenic origin in summer. The correlations among the size fractions revealed that BB and LMW neutrals might be degradation products from HS and humic-like substances (HS + BB), respectively, while LMW acids, from LMW neutrals. Principle component analysis revealed that the humic-like substances and the aromaticity of DOM were associated with temperature, chlorophyll a, phosphorous, and rainfall, whereas the other fractions and the molecular weight of HS were primarily affected by solar irradiation. Significant correlations between DOM composition and some biotic factors further suggested that DOM may even affect the biological communities, which provides an insight into the potential coupling effects of biotic and abiotic factors on DOM molecular composition in freshwater wetlands. - Highlights: • Humic fractions varied

1983 biotic studies of Yucca Mountain, Nevada Test Site, Nye County, Nevada

International Nuclear Information System (INIS)

O'Farrell, T.P.; Collins, E.

1984-04-01

A 27.5-square-mile portion of Yucca Mountain on and adjacent to the US Department of Energy's Nevada Test Site, Nye County, Nevada, is being considered as a potential location for a national high-level radioactive waste repository. Preliminary geologic and environmental characterization studies have been supported and more extensive studies are planned. Goals of the biotic surveys were to identify species of concern, describe major floral and faunal associations, and assess possible impacts of characterization and operational activities. Floral associations observed were characteristic of either the Mojave or Transition deserts that are widely distributed in southern Nevada. Diversity, in terms of total number of perennial species represented, was higher in Transition Desert associations than in Mojave Desert associations. Canopy coverage of associations fell within the range of reported values, but tended to be more homogeneous than expected. Annual vegetation was found to be diverse only where the frequency of Bromus rubens was low. Ground cover of winter annuals, especially annual grasses, was observed to be very dense in 1983. The threat of range fires on Yucca Mountain was high because of the increased amount of dead litter and the decreased amount of bare ground. Significant variability was observed in the distribution and relative abundance of several small mammal species between 1982 and 1983. Desert tortoise were found in low densities comparable with those observed in 1982. Evidence of recent activity, which included sighting of two live tortoises, was found in five areas on Yucca Mountain. Two of these areas have a high probability of sustaining significant impacts if a repository is constructed. Regeneration of aboveground shrub parts from root crowns was observed in areas damaged in 1982 by seismic testing with Vibroseis machines. These areas, which had been cleared to bare dirt by passage of the machines, also supported lush stands of winter annuals

How to integrate geology, biology, and modern wireless technologies to assess biotic-abiotic interactions on coastal dune systems: a new multidisciplinary approach

Science.gov (United States)

Sarti, Giovanni; Bertoni, Duccio; Bini, Monica; Ciccarelli, Daniela; Ribolini, Adriano; Ruocco, Matteo; Pozzebon, Alessandro; Alquini, Fernanda; Giaccari, Riccardo; Tordella, Stefano

2014-05-01

Coastal dune systems are arguably one of the most dynamic environments because their evolution is controlled by many factors, both natural and human-related. Hence, they are often exposed to processes leading to erosion, which in turn determine serious naturalistic and economic losses. Most recent studies carried out on different dune fields worldwide emphasized the notion that a better definition of this environment needs an approach that systematically involves several disciplines, striving to merge every data collected from any individual analyses. Therefore, a new multidisciplinary method to study coastal dune systems has been conceived in order to integrate geology, biology, and modern wireless technologies. The aim of the work is threefold: i) to check the reliability of this new approach; ii) to provide a dataset as complete as ever about the factors affecting the evolution of coastal dunes; and iii) to evaluate the influence of any biotic and abiotic factors on plant communities. The experimentation site is located along the Pisa coast within the Migliarino - S. Rossore - Massaciuccoli Regional Park, a protected area where human influence is low (Tuscany, Italy). A rectangle of 100 x 200 m containing 50 grids of 20 x 20 m was established along the coastal dune systems from the coastline to the pinewood at the landward end of the backdune area. Sampling from each grid determined grain-size analysis carried out on surface sediment samples such as geologic aspects; topographic surveys performed by means of DGPS-RTK instruments; geophysical surveys conducted with a GPR equipment, which will be matched with core drilling activities; digital image analysis of high definition pictures taken by means of a remote controlled aircraft drone flying over the study area; biological data obtained by percent cover of each vascular plant species recorded in the sampling unit. Along with geologic and biologic methodologies, this research implemented the use of informatics

Macro Expectations, Aggregate Uncertainty, and Expected Term Premia

DEFF Research Database (Denmark)

Dick, Christian D.; Schmeling, Maik; Schrimpf, Andreas

Based on individual expectations from the Survey of Professional Forecasters, we construct a realtime proxy for expected term premium changes on long-term bonds. We empirically investigate the relation of these bond term premium expectations with expectations about key macroeconomic variables as ...

Assessing of biotic integrity of the fish community in a heavily impacted segment of a tropical river in Brazil

Directory of Open Access Journals (Sweden)

Benjamin Carvalho Teixeira Pinto

2007-05-01

Full Text Available A index of biotic integrity (IBI was applied to assess the ecological health at seven sites of ca. 338 km extension of the Paraíba do Sul river, in bracketing a large urban-industrial complex. The aim was to evaluate the index response to changes in environmental quality during two seasons (winter/dry versus. summer/wet. Eight metrics were selected to IBI in three categories: 1 species richness and habitat composition; 2 indicator species; and 3 trophic structure. The IBI, based on the least impacted regional condition, showed the highest value at the most upstream site (Queluz=km 0 - Acceptable, then decreasing downstream and reaching the lowest record at Volta Redonda (km 125 - Impacted; afterwards there was an increasing quality toward the most downstream sites until reaching better scores at Além Paraíba (km 338 - Moderate Impacted/ Acceptable. During the winter/dry seasons a clearer spatial trend was detected when compared with oscillations in summer/wet. The IBI proved to be a suitable tool to evaluate environmental quality in this tropical and very altered large river, since it was sensitive to non-source point pollution changes, which occurred all over the studied area.O Índice de Integridade Biótica (IBI foi aplicado em sete locais do rio Paraíba do Sul, cobrindo uma extensão de 338 km, e incorporando um trecho de grande densidade industrial. O objetivo foi avaliar a resposta do índice às mudanças na qualidade ambiental durante dois períodos (inverno/seco versus verão/úmido. O IBI foi determinado através de oito métricas compreendidas em três categorias da comunidade de peixes: 1 riqueza de espécies e composição de habitats; 2 espécies indicadoras; e 3 estrutura trófica. Utilizou-se a condição menos impactada da região como abordagem para a comparação dos locais, com os mais altos valores ocorrendo nos locais mais a montante (Queluz=km 0 - Aceitável, diminuindo mais abaixo e atingindo os piores valores em

Modeling Pathways of Character Development across the First Three Decades of Life: An Application of Integrative Data Analysis Techniques to Understanding the Development of Hopeful Future Expectations.

Science.gov (United States)

Callina, Kristina Schmid; Johnson, Sara K; Tirrell, Jonathan M; Batanova, Milena; Weiner, Michelle B; Lerner, Richard M

2017-06-01

There were two purposes of the present research: first, to add to scholarship about a key character virtue, hopeful future expectations; and second, to demonstrate a recent innovation in longitudinal methodology that may be especially useful in enhancing the understanding of the developmental course of hopeful future expectations and other character virtues that have been the focus of recent scholarship in youth development. Burgeoning interest in character development has led to a proliferation of short-term, longitudinal studies on character. These data sets are sometimes limited in their ability to model character development trajectories due to low power or relatively brief time spans assessed. However, the integrative data analysis approach allows researchers to pool raw data across studies in order to fit one model to an aggregated data set. The purpose of this article is to demonstrate the promises and challenges of this new tool for modeling character development. We used data from four studies evaluating youth character strengths in different settings to fit latent growth curve models of hopeful future expectations from participants aged 7 through 26 years. We describe the analytic strategy for pooling the data and modeling the growth curves. Implications for future research are discussed in regard to the advantages of integrative data analysis. Finally, we discuss issues researchers should consider when applying these techniques in their own work.

Desertification, salinization, and biotic homogenization in a dryland river ecosystem.

Science.gov (United States)

Miyazono, Seiji; Patiño, Reynaldo; Taylor, Christopher M

2015-04-01

This study determined long-term changes in fish assemblages, river discharge, salinity, and local precipitation, and examined hydrological drivers of biotic homogenization in a dryland river ecosystem, the Trans-Pecos region of the Rio Grande/Rio Bravo del Norte (USA/Mexico). Historical (1977-1989) and current (2010-2011) fish assemblages were analyzed by rarefaction analysis (species richness), nonmetric multidimensional scaling (composition/variability), multiresponse permutation procedures (composition), and paired t-test (variability). Trends in hydrological conditions (1970s-2010s) were examined by Kendall tau and quantile regression, and associations between streamflow and specific conductance (salinity) by generalized linear models. Since the 1970s, species richness and variability of fish assemblages decreased in the Rio Grande below the confluence with the Rio Conchos (Mexico), a major tributary, but not above it. There was increased representation of lower-flow/higher-salinity tolerant species, thus making fish communities below the confluence taxonomically and functionally more homogeneous to those above it. Unlike findings elsewhere, this biotic homogenization was due primarily to changes in the relative abundances of native species. While Rio Conchos discharge was>2-fold higher than Rio Grande discharge above their confluence, Rio Conchos discharge decreased during the study period causing Rio Grande discharge below the confluence to also decrease. Rio Conchos salinity is lower than Rio Grande salinity above their confluence and, as Rio Conchos discharge decreased, it caused Rio Grande salinity below the confluence to increase (reduced dilution). Trends in discharge did not correspond to trends in precipitation except at extreme-high (90th quantile) levels. In conclusion, decreasing discharge from the Rio Conchos has led to decreasing flow and increasing salinity in the Rio Grande below the confluence. This spatially uneven desertification and

Climatic and biotic changes around the Carboniferous/Permian boundary recorded in the continental basins of the Czech Republic

Czech Academy of Sciences Publication Activity Database

Opluštil, S.; Šimůnek, Z.; Zajíc, Jaroslav; Mencl, V.

2013-01-01

Roč. 119, č. 1 (2013), s. 114-151 ISSN 0166-5162 Institutional research plan: CEZ:AV0Z30130516 Institutional support: RVO:67985831 Keywords : biotic change * Bohemian Massif * Carboniferous-Permian transition * continental basin Subject RIV: DB - Geology ; Mineralogy Impact factor: 3.313, year: 2013

Presence of riparian vegetation increases biotic condition of fish assemblages in two Brazilian reservoirs

OpenAIRE

Ferreira, Fabio Cop; Souza, Ursulla Pereira; Petrere Junior2, Miguel

2015-01-01

Abstract The riparian vegetation in lakes and reservoirs is source of course wood structures such as trunks and branches and is used as sheltering, spawning and foraging habitats for fishes. The reduction of these submerged structures can thus, affect the composition and structure of fish assemblages in reservoirs. Aim To evaluate the influence of riparian vegetation on the biotic condition of fish assemblage by adapting the Reservoir Fish Assemblage Index (RFAI) to two reservoirs in the Upp...

Biotic and surface catalyzed reactivity of nitrates at alkaline pH

International Nuclear Information System (INIS)

Rafrafi, Y.; Erable, B.; Ranaivomanana, H.; Bertron, A.; Albrecht, A.

2015-01-01

This study investigates the reactivity of nitrates in abiotic and biotic conditions at alkaline pH in the context of a repository for long-lived intermediate- level radioactive wastes. The work, carried out under environmental conditions closed to those prevailing in the storage: alkaline pH, no oxygen, solid materials (cement paste, steel), aims to identify the by-products of the nitrate reduction, to evaluate reaction kinetics and to determine the role of organic matter in these reactions with and without the presence of denitrifying microbial activity. This paper demonstrated that in the extreme conditions of pH in nuclear waste storage cells, nitrate reduction is a really possible scenario in the presence of microorganisms. (authors)

Disentangling effects of abiotic factors and biotic interactions on cross-taxon congruence in species turnover patterns of plants, moths and beetles.

Science.gov (United States)

Duan, Meichun; Liu, Yunhui; Yu, Zhenrong; Baudry, Jacques; Li, Liangtao; Wang, Changliu; Axmacher, Jan C

2016-04-01

High cross-taxon congruence in species diversity patterns is essential for the use of surrogate taxa in biodiversity conservation, but presence and strength of congruence in species turnover patterns, and the relative contributions of abiotic environmental factors and biotic interaction towards this congruence, remain poorly understood. In our study, we used variation partitioning in multiple regressions to quantify cross-taxon congruence in community dissimilarities of vascular plants, geometrid and arciinid moths and carabid beetles, subsequently investigating their respective underpinning by abiotic factors and biotic interactions. Significant cross-taxon congruence observed across all taxon pairs was linked to their similar responses towards elevation change. Changes in the vegetation composition were closely linked to carabid turnover, with vegetation structure and associated microclimatic conditions proposed causes of this link. In contrast, moth assemblages appeared to be dominated by generalist species whose turnover was weakly associated with vegetation changes. Overall, abiotic factors exerted a stronger influence on cross-taxon congruence across our study sites than biotic interactions. The weak congruence in turnover observed particularly between plants and moths highlights the importance of multi-taxon approaches based on groupings of taxa with similar turnovers, rather than the use of single surrogate taxa or environmental proxies, in biodiversity assessments.

Views on Biotic Nature and the Idea of Sustainable Development

Science.gov (United States)

Łepko, Zbigniew

2017-12-01

The search for balance between humankind's civilisational aspirations and the durable protection of nature is conditioned by contemporaneous views of biotic nature. Of particular importance in this regard are physiocentric and physiological views that may be set against one another. The first of these was presented by Hans Jonas, the second by Lothar Schäfer. This paper does not confine itself to setting one view against the other, but rather sets minimum conditions for cooperation between their promoters in the interests of balance between the aspirations of the present generation and those of future generations. Both views of nature are in their own way conducive to a break with the illusion present in some areas of the modern natural sciences - that nature is a boundless area of are inexhaustible resources.

A potential conflict between preserving regional plant diversity and biotic resistance to an invasive grass, Microstegium vimineum

Science.gov (United States)

J. Stephen Brewer

2010-01-01

The relevance of diversity-biotic resistance studies to conservation of biodiversity could be improved by simultaneously examining the drivers of regional diversity and their effects on local species diversity and invasion. Using path analysis, I examined direct and indirect effects of various abiotic factors (i.e., flooding, treefall gaps, soil texture, proximity to...

Metabolomics reveals biotic and abiotic elicitor effects on the soft coral Sarcophyton ehrenbergi terpenoid content

OpenAIRE

Farag, Mohamed A.; Al-Mahdy, Dalia A.; Meyer, Achim; Westphal, Hildegard; Wessjohann, Ludger A.

2017-01-01

The effects of six biotic and abiotic elicitors, i.e. MeJA (methyl jasmonate), SA (salicylic acid), ZnCl2, glutathione and ?-glucan BG (fungal elicitor), and wounding, on the secondary metabolite accumulation in the soft coral Sarcophyton ehrenbergi were assessed. Upon elicitation, metabolites were extracted and analysed by ultra-performance liquid chromatography-mass spectrometry (UPLC-MS). Except for MeJA, no differences in photosynthetic efficiency were observed after treatments, suggestin...

YM2: Continuum expectations, lattice convergence, and lassos

International Nuclear Information System (INIS)

Driver, B.K.

1989-01-01

The two dimensional Yang-Mills theory (YM 2 ) is analyzed in both the continuum and the lattice. In the complete axial gauge the continuum theory may be defined in terms of a Lie algebra valued white noise, and parallel translation may be defined by stochastic differential equations. This machinery is used to compute the expectations of gauge invariant functions of the parallel translation operators along a collection of curves C. The expectation values are expressed as finite dimensional integrals with densities that are products of the heat kernel on the structure group. The time parameters of the heat kernels are determined by the areas enclosed by the collection C, and the arguments are determined by the crossing topologies of the curves in C. The expectations for the Wilson lattice models have a similar structure, and from this it follows that in the limit of small lattice spacing the lattice expectations converge to the continuum expectations. It is also shown that the lasso variables advocated by L. Gross exist and are sufficient to generate all the measurable functions on the YM 2 -measure space. (orig.)

Auxin Response Factors (ARFs are potential mediators of auxin action in tomato response to biotic and abiotic stress (Solanum lycopersicum.

Directory of Open Access Journals (Sweden)

Sarah Bouzroud

Full Text Available Survival biomass production and crop yield are heavily constrained by a wide range of environmental stresses. Several phytohormones among which abscisic acid (ABA, ethylene and salicylic acid (SA are known to mediate plant responses to these stresses. By contrast, the role of the plant hormone auxin in stress responses remains so far poorly studied. Auxin controls many aspects of plant growth and development, and Auxin Response Factors play a key role in the transcriptional activation or repression of auxin-responsive genes through direct binding to their promoters. As a mean to gain more insight on auxin involvement in a set of biotic and abiotic stress responses in tomato, the present study uncovers the expression pattern of SlARF genes in tomato plants subjected to biotic and abiotic stresses. In silico mining of the RNAseq data available through the public TomExpress web platform, identified several SlARFs as responsive to various pathogen infections induced by bacteria and viruses. Accordingly, sequence analysis revealed that 5' regulatory regions of these SlARFs are enriched in biotic and abiotic stress-responsive cis-elements. Moreover, quantitative qPCR expression analysis revealed that many SlARFs were differentially expressed in tomato leaves and roots under salt, drought and flooding stress conditions. Further pointing to the putative role of SlARFs in stress responses, quantitative qPCR expression studies identified some miRNA precursors as potentially involved in the regulation of their SlARF target genes in roots exposed to salt and drought stresses. These data suggest an active regulation of SlARFs at the post-transcriptional level under stress conditions. Based on the substantial change in the transcript accumulation of several SlARF genes, the data presented in this work strongly support the involvement of auxin in stress responses thus enabling to identify a set of candidate SlARFs as potential mediators of biotic and abiotic

Vacuum expectation value of twist fields

Science.gov (United States)

Belitsky, A. V.

2017-09-01

Twist fields emerge in a number of physical applications ranging from entanglement entropy to scattering amplitudes in four-dimensional gauge theories. In this work, their vacuum expectation values are studied in the path integral framework. By performing a gauge transformation, their correlation functions are reduced to field theory of matter fields in external Aharonov-Bohm vortices. The resulting functional determinants are then analyzed within the zeta-function regularization for the spectrum of Bessel zeros, and concise formulas are derived.

At limits of life: multidisciplinary insights reveal environmental constraints on biotic diversity in continental Antarctica.

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Catarina Magalhães

Full Text Available Multitrophic communities that maintain the functionality of the extreme Antarctic terrestrial ecosystems, while the simplest of any natural community, are still challenging our knowledge about the limits to life on earth. In this study, we describe and interpret the linkage between the diversity of different trophic level communities to the geological morphology and soil geochemistry in the remote Transantarctic Mountains (Darwin Mountains, 80°S. We examined the distribution and diversity of biota (bacteria, cyanobacteria, lichens, algae, invertebrates with respect to elevation, age of glacial drift sheets, and soil physicochemistry. Results showed an abiotic spatial gradient with respect to the diversity of the organisms across different trophic levels. More complex communities, in terms of trophic level diversity, were related to the weakly developed younger drifts (Hatherton and Britannia with higher soil C/N ratio and lower total soluble salts content (thus lower conductivity. Our results indicate that an increase of ion concentration from younger to older drift regions drives a succession of complex to more simple communities, in terms of number of trophic levels and diversity within each group of organisms analysed. This study revealed that integrating diversity across multi-trophic levels of biotic communities with abiotic spatial heterogeneity and geological history is fundamental to understand environmental constraints influencing biological distribution in Antarctic soil ecosystems.

Role of miRNAs and siRNAs in biotic and abiotic stress responses of plants

KAUST Repository

Khraiwesh, Basel

2012-02-01

Small, non-coding RNAs are a distinct class of regulatory RNAs in plants and animals that control a variety of biological processes. In plants, several classes of small RNAs with specific sizes and dedicated functions have evolved through a series of pathways. The major classes of small RNAs include microRNAs (miRNAs) and small interfering RNAs (siRNAs), which differ in their biogenesis. miRNAs control the expression of cognate target genes by binding to reverse complementary sequences, resulting in cleavage or translational inhibition of the target RNAs. siRNAs have a similar structure, function, and biogenesis as miRNAs but are derived from long double-stranded RNAs and can often direct DNA methylation at target sequences. Besides their roles in growth and development and maintenance of genome integrity, small RNAs are also important components in plant stress responses. One way in which plants respond to environmental stress is by modifying their gene expression through the activity of small RNAs. Thus, understanding how small RNAs regulate gene expression will enable researchers to explore the role of small RNAs in biotic and abiotic stress responses. This review focuses on the regulatory roles of plant small RNAs in the adaptive response to stresses. This article is part of a Special Issue entitled: Plant gene regulation in response to abiotic stress. © 2011 Elsevier B.V.

Trichoderma species mediated differential tolerance against biotic stress of phytopathogens in Cicer arietinum L.

Science.gov (United States)

Saxena, Amrita; Raghuwanshi, Richa; Singh, Harikesh Bahadur

2015-02-01

Trichoderma spp. have been reported to aid in imparting biotic as well as abiotic tolerance to plants. However, there are only few reports unfolding the differential ability of separate species of Trichoderma genera generally exploited for their biocontrol potential in this framework. A study was undertaken to evaluate the biocontrol potential of different Trichoderma species namely T. harzianum, T. asperellum, T. koningiopsis, T. longibrachiatum, and T. aureoviride as identified in the group of indigenous isolates from the agricultural soils of Eastern Uttar Pradesh, India. Their biocontrol potential against three major soilborne phytopathogens, i.e., Sclerotium rolfsii, Sclerotinia sclerotiorum, and Colletotrichum capsici was confirmed by dual culture plate technique. Efficient mycoparasitic ability was further assessed in all the isolates in relation to chitinase, β-1,3 glucanase, pectinase, lipase, amylase, and cellulase production while equally consistent results were obtained for their probable phosphate solubilization and indole acetic acid (IAA) production abilities. The selected isolates were further subjected to test their ability to promote plant growth, to reduce disease incidence and to tolerate biotic stress in terms of lignification pattern against S. rolfsii in chickpea plants. Among the identified Trichoderma species, excellent results were observed for T. harzianum and T. koningiopsis indicating better biocontrol potential of these species in the group and thus exhibiting perspective for their commercial exploitation. © 2015 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Impact of phenolic compounds and related enzymes in Sorghum varieties for resistance and susceptibility to biotic and abiotic stresses

NARCIS (Netherlands)

Dicko, M.H.; Gruppen, H.; Barro, C.; Traore, A.S.; Berkel, van W.J.H.; Voragen, A.G.J.

2005-01-01

Contents of phenolic compounds and related enzymes before and after sorghum grain germination were compared between varieties either resistant or susceptible to biotic (sooty stripe, sorghum midge, leaf anthracnose, striga, and grain molds) and abiotic (lodging, drought resistance, and photoperiod

Brain systems underlying encounter expectancy bias in spider phobia.

Science.gov (United States)

Aue, Tatjana; Hoeppli, Marie-Eve; Piguet, Camille; Hofstetter, Christoph; Rieger, Sebastian W; Vuilleumier, Patrik

2015-06-01

Spider-phobic individuals are characterized by exaggerated expectancies to be faced with spiders (so-called encounter expectancy bias). Whereas phobic responses have been linked to brain systems mediating fear, little is known about how the recruitment of these systems relates to exaggerated expectancies of threat. We used fMRI to examine spider-phobic and control participants while they imagined visiting different locations in a forest after having received background information about the likelihood of encountering different animals (spiders, snakes, and birds) at these locations. Critically, imagined encounter expectancies modulated brain responses differently in phobics as compared with controls. Phobics displayed stronger negative modulation of activity in the lateral prefrontal cortex, precuneus, and visual cortex by encounter expectancies for spiders, relative to snakes or birds (within-participants analysis); these effects were not seen in controls. Between-participants correlation analyses within the phobic group further corroborated the hypothesis that these phobia-specific modulations may underlie irrationality in encounter expectancies (deviations of encounter expectancies from objective background information) in spider phobia; the greater the negative modulation a phobic participant displayed in the lateral prefrontal cortex, precuneus, and visual cortex, the stronger was her bias in encounter expectancies for spiders. Interestingly, irrationality in expectancies reflected in frontal areas relied on right rather than left hemispheric deactivations. Our data accord with the idea that expectancy biases in spider phobia may reflect deficiencies in cognitive control and contextual integration that are mediated by right frontal and parietal areas.

Parasites of freshwater fishes and the Great American Biotic Interchange: a bridge too far?

Science.gov (United States)

Choudhury, A; García-Varela, M; Pérez-Ponce de León, G

2017-03-01

We examine the extent to which adult helminths of freshwater fishes have been part of the Great American Biotic Interchange (GABI), by integrating information in published studies and new data from Panama with fish biogeography and Earth history of Middle America. The review illustrates the following: (1) the helminth fauna south of the Trans-Mexican Volcanic Belt, and especially south of the Isthmus of Tehuantepec, shows strong Neotropical affinities; (2) host-parasite associations follow principles of the 'biogeographic core fauna' in which host-lineage specificity is pronounced; (3) phylogenetic analysis of the widespread freshwater trematode family Allocreadiidae reveals a complex history of host-shifting and co-diversification involving mainly cyprinodontiforms and characids; (4) allocreadiids, monogeneans and spiruridan nematodes of Middle American cyprinodontiforms may provide clues to the evolutionary history of their hosts; and (5) phylogenetic analyses of cryptogonimid trematodes may reveal whether or how cichlids interacted with marine or brackish-water environments during their colonization history. The review shows that 'interchange' is limited and asymmetrical, but simple narratives of northward isthmian dispersal will likely prove inadequate to explain the historical biogeography of many host-parasite associations in tropical Middle America, particularly those involving poeciliids. Finally, our study highlights the urgent need for targeted survey work across Middle America, focused sampling in river drainages of Colombia and Venezuela, and deeper strategic sampling in other parts of South America, in order to develop and test robust hypotheses about fish-parasite associations in Middle America.

Past tree influence and prescribed fire mediate biotic interactions and community reassembly in a grassland-restoration experiment

Science.gov (United States)

Charles B. Halpern; Joseph A. Antos; Donald McKenzie; Annette M. Olson; Lara Souza

2016-01-01

1. Woody plant encroachment of grasslands is occurring globally, with profound ecological consequences. Attempts to restore herbaceous dominance may fail if the woody state is resilient or if intervention leads to an alternate, undesirable state. Restoration outcomes often hinge on biotic interactions – particularly on priority effects that inhibit or promote community...

Performance comparison of biotic indices measuring the ecological status base on soft-bottom macroinvertebrates: a study along the shallow Gomishan lagoon (Southeast Caspian Sea

Directory of Open Access Journals (Sweden)

Nabee Basatnia

2015-12-01

Full Text Available Abstract This paper aims to test the suitability of some biotic indices for their application in Southeast Caspian Sea. For this purpose, the ecological quality of the Gomishan lagoon was assessed using three biotic indices (AMBI, BENTIX, BOPA during summer and autumn 2010. The results from the application of the biotic indices do not highlight a clear distinction between the stations. The results show that two of the indices (AMBI and BENTIX are very close in terms of diagnosis (good and high and seem to generally perform better than BOPA. In addition, Principal Component Analysis (PCA based on abiotic parameters showed clear spatial and temporal differences in environmental variables. However, at this shallow sites with low human pressure and high water residence times, such benthic community composition can be associated with physical stress due to salinity increase and to changes in environmental characteristics, triggered by conventional seasonal variations. Natural variability of transitional waters is a crucial factor for a correct evaluation of the ecological condition of macroinvertebrate communities across the lagoonal system.

Abiotic versus biotic iron mineral transformation studied by a miniaturized backscattering Mössbauer spectrometer (MIMOS II), X-ray diffraction and Raman spectroscopy

Science.gov (United States)

Markovski, C.; Byrne, J. M.; Lalla, E.; Lozano-Gorrín, A. D.; Klingelhöfer, G.; Rull, F.; Kappler, A.; Hoffmann, T.; Schröder, C.

2017-11-01

Searching for biomarkers or signatures of microbial transformations of minerals is a critical aspect for determining how life evolved on Earth, and whether or not life may have existed in other planets, including Mars. In order to solve such questions, several missions to Mars have sought to determine the geochemistry and mineralogy on the Martian surface. This research includes the two miniaturized Mössbauer spectrometers (MIMOS II) on board the Mars Exploration Rovers Spirit and Opportunity, which have detected a variety of iron minerals on Mars, including magnetite (Fe2+Fe3+2O4) and goethite (α-FeO(OH)). On Earth, both minerals can derive from microbiological activity (e.g. through dissimilatory iron reduction of ferrihydrite by Fe(III)-reducing bacteria). Here we used a lab based MIMOS II to characterize the mineral products of biogenic transformations of ferrihydrite to magnetite by the Fe(III)-reducing bacteria Geobacter sulfurreducens. In combination with Raman spectroscopy and X-ray diffraction (XRD), we observed the formation of magnetite, goethite and siderite. We compared the material produced by biogenic transformations to abiotic samples in order to distinguish abiotic and biotic iron minerals by techniques that are or will be available onboard Martian based laboratories. The results showed the possibility to distinguish the abiotic and biotic origin of the minerals. Mossbauer was able to distinguish the biotic/abiotic magnetite with the interpretation of the geological context (Fe content mineral assemblages and accompanying minerals) and the estimation of the particle size in a non-destructive way. The Raman was able to confirm the biotic/abiotic principal peaks of the magnetite, as well as the organic principal vibration bands attributed to the bacteria. Finally, the XRD confirmed the particle size and mineralogy.

Adolescent pregnancy: do expectations affect intentions?

Science.gov (United States)

Stevens-Simon, Catherine; Sheeder, Jeanelle; Beach, Roberta; Harter, Susan

2005-09-01

To establish the relationship between expectations about the effects of childbearing on specific aspects of life and the strength of the desire to remain nonpregnant during adolescence. We hypothesized that the absence of negative childbearing expectations is associated with an increase in the odds that sexually active, inadequately contracepting teenage girls are cognitively susceptible to conception. A racially and ethnically diverse group of 351 nulligravida, inadequately contracepting teenagers was studied. Participants responded to 60 items that asked about their expectation about the effects of becoming pregnant and not doing so. Analyses were performed to determine the factorial structure of the childbearing expectations items and their relationship to cognitive susceptibility to conception, defined as the lack of desire to remain nonpregnant. The analysis yielded a 9-factor solution for the childbearing expectations items. All 9 sub-scales exhibited acceptable reliability coefficients, stable factor patterns, and correlated significantly with the desire to remain nonpregnant. A dose-dependent relationship suggestive of causality was also apparent. In stepwise regression the sub-scales that assessed the anticipated effect of childbearing on future plans, self-esteem, and boyfriend relations remained significant and accounted for 56% of the variance in the desire to remain nonpregnant. The lengthy research instrument was reduced to an 8-item screening tool without loss of psychometric integrity or explanatory power. Childbearing expectations reflect distinct concepts and account for a significant portion of the variance in the desire to remain nonpregnant during adolescence. Thus the 8-item screening tool we validated might be used to formulate a differential diagnosis for the enigmatic behavior of teens who say they do not "want" to become pregnant but do not "mind" doing so enough to try to avoid conceiving by default.

Integration of human behavior expectations in training: human behavior simulator

International Nuclear Information System (INIS)

Obeso Torices, E.

2012-01-01

The analysis of operating experience in nuclear Sta Maria de Garona point to fundamental human factor. After evaluation of the Peer Review, reinforcing behavior expectations was identified as improvement area. The human behavior simulator aims at minimizing human error. Making teamwork practices ensures that the equipment itself reinforces their behavior and performance in the work of the Central. The scope of practice to perform on the simulator includes all phases of execution. The team should analyze the best way to run, the impact of it on the ground and interaction with other sections, being the simulator training environment the situation closer to reality.

Role of Biotic and Abiotic Processes on Soil CO2 Dynamics in the McMurdo Dry Valleys, Antarctica

Science.gov (United States)

Risk, D. A.; Macintyre, C. M.; Lee, C.; Cary, C.; Shanhun, F.; Almond, P. C.

2016-12-01

In the harsh conditions of the Antarctic Dry Valleys, microbial activity has been recorded via measurements of soil carbon dioxide (CO2) concentration and surface efflux. However, high temporal resolution studies in the Dry Valleys have also shown that abiotic solubility-driven processes can strongly influence (and perhaps even dominate) the CO2 dynamics in these low flux environments and suggests that biological activity may be lower than previously thought. In this study, we aim to improve our understanding of CO2 dynamics (biotic and abiotic) in Antarctic Dry Valley soils using long-term automated measurements of soil CO2 surface flux and soil profile concentration at several sites, often at sub-diel frequency. We hypothesize that soil CO2 variations are driven primarily by environmental factors affecting CO2 solubility in soil solution, mainly temperature, and that these processes may even overprint biologic production in representative Dry Valley soils. Monitoring of all sites revealed only one likely biotic CO2 production event, lasting three weeks during the Austral summer and reaching fluxes of 0.4 µmol/m2/s. Under more typical low flux conditions (sampling campaigns. Subsurface CO2 monitoring and a lab-controlled Antarctic soil simulation experiment confirmed that abiotic processes are capable of dominating soil CO2 variability. Diel temperature cycles crossing the freezing boundary revealed a dual abiotic cycle of solubility cycling and gas exclusion from ice formation observed only by high temporal frequency measurements (30 min). This work demonstrates a need for a numerical model to partition the dynamic abiotic processes underlying any biotic CO2 production in order to understand potential climate-change induced increases in microbial productivity in terrestrial Antarctica.

Determination of sulfur isotopic composition for the study of iron sulfides origin, biotic or abiotic, in anoxic corrosion

International Nuclear Information System (INIS)

Grousset, Sophie

2016-01-01

The first goal of this project was to develop a methodology based on the study of the sulfur isotopic composition enabling the determination of iron sulfides origin, biotic or abiotic, within the corrosion products layers (CPL). Then, the aim was to apply this methodology to real corrosion systems in order to determine the mechanisms of iron sulfides formation. Sulfur isotopic analyses methodologies, adapted to micrometric iron sulfides layers observed in real corrosion systems, were developed in nanoSIMS and ToF-SIMS. The study of iron sulfides formed in anoxic carbonated medium with or without sulphate-reducing bacteria validated the use of these methods for the determination of iron sulfides origin. The application of these methods coupled with the precise characterization of irons sulfides formed in the real corrosion systems show two kind of corrosion pattern. In pattern 1, the iron sulfides are localized in the external part of the CPL. They result from the Fe 2+ migration from the metal surface to areas rich in biotic S 2- . In this pattern, corrosion rates are lower than 20 μm/year for laboratory systems, and lower than 5 μm/year for archaeological objects. In pattern 2, the large presence of conductive phases in the CPL results in the delocalization of electrons, and so a disequilibrium of the charges at the metal's surface. That leads to the migration of biotic S 2- in the CPL till the metal where they precipitate in iron sulphides. This pattern shows high corrosion rates (∼100 μm/an) that might be resulting from the accumulation of bio-corrosion and chloride corrosion mechanisms. (author) [fr

Giving the Expectancy-Value Model a Heart

OpenAIRE

Henning, V.; Hennig-Thurau, T.; Feiereisen, S.

2012-01-01

Over the past decade, research in consumer behavior has debated the role of emotion in consumer decision making intensively but has offered few attempts to integrate emotion-related findings with established theoretical frameworks. This manuscript augments the classical expectancy-value model of attitude with a dimensional model of emotion. An experiment involving 308 college students who face actual purchase decisions shows that predictions of attitudes, behavioral intentions and actual beha...

Abiotic/biotic coupling in the rhizosphere: a reactive transport modeling analysis

Science.gov (United States)

Lawrence, Corey R.; Steefel, Carl; Maher, Kate

2014-01-01

A new generation of models is needed to adequately simulate patterns of soil biogeochemical cycling in response changing global environmental drivers. For example, predicting the influence of climate change on soil organic matter storage and stability requires models capable of addressing complex biotic/abiotic interactions of rhizosphere and weathering processes. Reactive transport modeling provides a powerful framework simulating these interactions and the resulting influence on soil physical and chemical characteristics. Incorporation of organic reactions in an existing reactive transport model framework has yielded novel insights into soil weathering and development but much more work is required to adequately capture root and microbial dynamics in the rhizosphere. This endeavor provides many advantages over traditional soil biogeochemical models but also many challenges.

Abiotic and biotic factors responsible for antimonite oxidation in Agrobacterium tumefaciens GW4

Science.gov (United States)

Li, Jingxin; Yang, Birong; Shi, Manman; Yuan, Kai; Guo, Wei; Wang, Qian; Wang, Gejiao

2017-03-01

Antimonite [Sb(III)]-oxidizing bacteria can transform the toxic Sb(III) into the less toxic antimonate [Sb(V)]. Recently, the cytoplasmic Sb(III)-oxidase AnoA and the periplasmic arsenite [As(III)] oxidase AioAB were shown to responsible for bacterial Sb(III) oxidation, however, disruption of each gene only partially decreased Sb(III) oxidation efficiency. This study showed that in Agrobacterium tumefaciens GW4, Sb(III) induced cellular H2O2 content and H2O2 degradation gene katA. Gene knock-out/complementation of katA, anoA, aioA and anoA/aioA and Sb(III) oxidation and growth experiments showed that katA, anoA and aioA were essential for Sb(III) oxidation and resistance and katA was also essential for H2O2 resistance. Furthermore, linear correlations were observed between cellular H2O2 and Sb(V) content in vivo and chemical H2O2 and Sb(V) content in vitro (R2 = 0.93 and 0.94, respectively). These results indicate that besides the biotic factors, the cellular H2O2 induced by Sb(III) also catalyzes bacterial Sb(III) oxidation as an abiotic oxidant. The data reveal a novel mechanism that bacterial Sb(III) oxidation is associated with abiotic (cellular H2O2) and biotic (AnoA and AioAB) factors and Sb(III) oxidation process consumes cellular H2O2 which contributes to microbial detoxification of both Sb(III) and cellular H2O2.

A Multimetric Benthic Macroinvertebrate Index for the Assessment of Stream Biotic Integrity in Korea

Directory of Open Access Journals (Sweden)

Soon-Jin Hwang

2012-10-01

Full Text Available At a time when anthropogenic activities are increasingly disturbing the overall ecological integrity of freshwater ecosystems, monitoring of biological communities is central to assessing the health and function of streams. This study aimed to use a large nation-wide database to develop a multimetric index (the Korean Benthic macroinvertebrate Index of Biological Integrity—KB-IBI applicable to the biological assessment of Korean streams. Reference and impaired conditions were determined based on watershed, chemical and physical criteria. Eight of an initial 34 candidate metrics were selected using a stepwise procedure that evaluated metric variability, redundancy, sensitivity and responsiveness to environmental gradients. The selected metrics were number of taxa, percent Ephemeroptera-Plecoptera-Trichoptera (EPT individuals, percent of a dominant taxon, percent taxa abundance without Chironomidae, Shannon’s diversity index, percent gatherer individuals, ratio of filterers and scrapers, and the Korean saprobic index. Our multimetric index successfully distinguished reference from impaired conditions. A scoring system was established for each core metric using its quartile range and response to anthropogenic disturbances. The multimetric index was classified by aggregating the individual metric ..scores and the value range was quadrisected to provide a narrative criterion (Poor, Fair, Good and Excellent to describe the biological integrity of the streams in the study. A validation procedure showed that the index is an effective method for evaluating stream conditions, and thus is appropriate for use in future studies measuring the long-term status of streams, and the effectiveness of restoration methods.

A Multimetric Benthic Macroinvertebrate Index for the Assessment of Stream Biotic Integrity in Korea

Science.gov (United States)

Jun, Yung-Chul; Won, Doo-Hee; Lee, Soo-Hyung; Kong, Dong-Soo; Hwang, Soon-Jin

2012-01-01

At a time when anthropogenic activities are increasingly disturbing the overall ecological integrity of freshwater ecosystems, monitoring of biological communities is central to assessing the health and function of streams. This study aimed to use a large nation-wide database to develop a multimetric index (the Korean Benthic macroinvertebrate Index of Biological Integrity—KB-IBI) applicable to the biological assessment of Korean streams. Reference and impaired conditions were determined based on watershed, chemical and physical criteria. Eight of an initial 34 candidate metrics were selected using a stepwise procedure that evaluated metric variability, redundancy, sensitivity and responsiveness to environmental gradients. The selected metrics were number of taxa, percent Ephemeroptera-Plecoptera-Trichoptera (EPT) individuals, percent of a dominant taxon, percent taxa abundance without Chironomidae, Shannon’s diversity index, percent gatherer individuals, ratio of filterers and scrapers, and the Korean saprobic index. Our multimetric index successfully distinguished reference from impaired conditions. A scoring system was established for each core metric using its quartile range and response to anthropogenic disturbances. The multimetric index was classified by aggregating the individual metric ..scores and the value range was quadrisected to provide a narrative criterion (Poor, Fair, Good and Excellent) to describe the biological integrity of the streams in the study. A validation procedure showed that the index is an effective method for evaluating stream conditions, and thus is appropriate for use in future studies measuring the long-term status of streams, and the effectiveness of restoration methods. PMID:23202765

Stochastic sampling of quadrature grids for the evaluation of vibrational expectation values

Science.gov (United States)

López Ríos, Pablo; Monserrat, Bartomeu; Needs, Richard J.

2018-02-01

The thermal lines method for the evaluation of vibrational expectation values of electronic observables [B. Monserrat, Phys. Rev. B 93, 014302 (2016), 10.1103/PhysRevB.93.014302] was recently proposed as a physically motivated approximation offering balance between the accuracy of direct Monte Carlo integration and the low computational cost of using local quadratic approximations. In this paper we reformulate thermal lines as a stochastic implementation of quadrature-grid integration, analyze the analytical form of its bias, and extend the method to multiple-point quadrature grids applicable to any factorizable harmonic or anharmonic nuclear wave function. The bias incurred by thermal lines is found to depend on the local form of the expectation value, and we demonstrate that the use of finer quadrature grids along selected modes can eliminate this bias, while still offering an ˜30 % lower computational cost than direct Monte Carlo integration in our tests.

Invasion by nonnative brook trout in Panther Creek, Idaho: Roles of local habitat quality, biotic resistance, and connectivity to source habitats

Science.gov (United States)

Benjamin, Joseph R.; Dunham, Jason B.; Dare, M.R.

2007-01-01

Theoretical models and empirical evidence suggest that the invasion of nonnative species in freshwaters is facilitated through the interaction of three factors: habitat quality, biotic resistance, and connectivity. We measured variables that represented each factor to determine which were associated with the occurrence of nonnative brook trout Salvelinus fontinalis in Panther Creek, a tributary to the Salmon River, Idaho. Habitat variables included measures of summer and winter temperature, instream cover, and channel size. The abundance of native rainbow trout Oncorhynchus mykiss within sampled sites was used as a measure of biotic resistance. We also considered the connectivity of sample sites to unconfined valley bottoms, which were considered habitats that may serve as sources for the spread of established populations of brook trout. We analyzed the occurrence of small (<150‐mm [fork length]) and large (≥150‐mm) brook trout separately, assuming that the former represents an established invasion while accounting for the higher potential mobility of the latter. The occurrence of small brook trout was strongly associated with the proximity of sites to large, unconstrained valley bottoms, providing evidence that such habitats may serve as sources for the spread of brook trout invasion. Within sites, winter degree‐days and maximum summer temperature were positively associated with the occurrence of small brook trout. The occurrence of large brook trout was not related to any of the variables considered, perhaps due to the difficulty of linking site‐specific habitat factors to larger and more mobile individuals. The abundance of rainbow trout was not conclusively associated with the occurrence of either small or large brook trout, providing little support for the role of biotic resistance. Overall, our results suggest that source connectivity and local habitat characteristics, but not biotic resistance, influence the establishment and spread of

Setting clear expectations for safety basis development

International Nuclear Information System (INIS)

MORENO, M.R.

2003-01-01

DOE-RL has set clear expectations for a cost-effective approach for achieving compliance with the Nuclear Safety Management requirements (10 CFR 830, Nuclear Safety Rule) which will ensure long-term benefit to Hanford. To facilitate implementation of these expectations, tools were developed to streamline and standardize safety analysis and safety document development resulting in a shorter and more predictable DOE approval cycle. A Hanford Safety Analysis and Risk Assessment Handbook (SARAH) was issued to standardized methodologies for development of safety analyses. A Microsoft Excel spreadsheet (RADIDOSE) was issued for the evaluation of radiological consequences for accident scenarios often postulated for Hanford. A standard Site Documented Safety Analysis (DSA) detailing the safety management programs was issued for use as a means of compliance with a majority of 3009 Standard chapters. An in-process review was developed between DOE and the Contractor to facilitate DOE approval and provide early course correction. As a result of setting expectations and providing safety analysis tools, the four Hanford Site waste management nuclear facilities were able to integrate into one Master Waste Management Documented Safety Analysis (WM-DSA)

A comparison of different biotic indices based on benthic macro-invertebrates in italian lakes

Directory of Open Access Journals (Sweden)

Laura MARZIALI

2011-02-01

Full Text Available Benthic macroinvertebrates samples were taken from Italian lakes with different geological, morphological and chemical characteristics. Thirty-two lowland small and large lakes sampled using a grab in soft substrate were selected to develop biotic indices. Diversity indices based on species numbers - abundances and indices using species sensitivity values were compared. The lakes selected were all situated in the Alpine Ecoregion below 800 m a.s.l. and had similar chemical composition but different levels of anthropogenic pressure. Lakes with data available in different years were included as separate lakes in the analysis; littoralsublittoral samples of large lakes were also separated from profundal samples yielding a total of 41 sites for analysis. Seven different biotic indices were compared: (1 Shannon diversity index (H, (2 weighted Shannon diversity index (Hw including in the calculation a sensitivity value assigned to each species, (3 a benthic quality index based on means of three different environmental variables, measuring trophic status, weighted by species abundances (BQITS, (4 an index based on weighted means using a larger set of environmental variables (BQIENV, (5 a modified BQITS, which included both species numbers and total abundance of individuals (BQIES, (6 an index calculated according to a rarefaction method (ES, (7 an index considering indicator species based on experts judgment (BQIEJ. The indices were compared with a trophic status index (TSI constructed by joining three environmental variables: O2% saturation in the hypolimnion during summer stratification, total phosphorous and transparency during full circulation. Comparisons were also made with another environmental stress index (ENI constructed on a larger number of variables. All the biotic indices had significant correlations with both TSI and ENI. BQIES, WFD compliant and well correlated with TSI and ENI, was selected to tentatively assign the investigated lakes

Macro Expectations, Aggregate Uncertainty, and Expected Term Premia

DEFF Research Database (Denmark)

Dick, Christian D.; Schmeling, Maik; Schrimpf, Andreas

2013-01-01

as well as aggregate macroeconomic uncertainty at the level of individual forecasters. We find that expected term premia are (i) time-varying and reasonably persistent, (ii) strongly related to expectations about future output growth, and (iii) positively affected by uncertainty about future output growth...... and in ation rates. Expectations about real macroeconomic variables seem to matter more than expectations about nominal factors. Additional findings on term structure factors suggest that the level and slope factor capture information related to uncertainty about real and nominal macroeconomic prospects...

Influence of Solar Radiation and Biotic Interactions on Bacterial and Eukaryotic Communities Associated with Sewage Decomposition in Ambient Water - Poster

Science.gov (United States)

Sewage and ambient water both consist of a highly complex array of bacteria and eukaryotic microbes. When these communities are mixed, the persistence of sewage-derived pathogens in environmental waters can represent a significant public health concern. Solar radiation and biotic...

Predicting problem behaviors with multiple expectancies: expanding expectancy-value theory.

Science.gov (United States)

Borders, Ashley; Earleywine, Mitchell; Huey, Stanley J

2004-01-01

Expectancy-value theory emphasizes the importance of outcome expectancies for behavioral decisions, but most tests of the theory focus on a single behavior and a single expectancy. However, the matching law suggests that individuals consider expected outcomes for both the target behavior and alternative behaviors when making decisions. In this study, we expanded expectancy-value theory to evaluate the contributions of two competing expectancies to adolescent behavior problems. One hundred twenty-one high school students completed measures of behavior problems, expectancies for both acting out and academic effort, and perceived academic competence. Students' self-reported behavior problems covaried mostly with perceived competence and academic expectancies and only nominally with problem behavior expectancies. We suggest that behavior problems may result from students perceiving a lack of valued or feasible alternative behaviors, such as studying. We discuss implications for interventions and suggest that future research continue to investigate the contribution of alternative expectancies to behavioral decisions.

Interactions among biotic and abiotic factors affect the reliability of tungsten microneedles puncturing in vitro and in vivo peripheral nerves: A hybrid computational approach

Energy Technology Data Exchange (ETDEWEB)

Sergi, Pier Nicola, E-mail: p.sergi@sssup.it [Translational Neural Engineering Laboratory, The Biorobotics Institute, Scuola Superiore Sant' Anna, Viale Rinaldo Piaggio 34, Pontedera, 56025 (Italy); Jensen, Winnie [Department of Health Science and Technology, Fredrik Bajers Vej 7, 9220 Aalborg (Denmark); Yoshida, Ken [Department of Biomedical Engineering, Indiana University - Purdue University Indianapolis, 723 W. Michigan St., SL220, Indianapolis, IN 46202 (United States)

2016-02-01

Tungsten is an elective material to produce slender and stiff microneedles able to enter soft tissues and minimize puncture wounds. In particular, tungsten microneedles are used to puncture peripheral nerves and insert neural interfaces, bridging the gap between the nervous system and robotic devices (e.g., hand prostheses). Unfortunately, microneedles fail during the puncture process and this failure is not dependent on stiffness or fracture toughness of the constituent material. In addition, the microneedles' performances decrease during in vivo trials with respect to the in vitro ones. This further effect is independent on internal biotic effects, while it seems to be related to external biotic causes. Since the exact synergy of phenomena decreasing the in vivo reliability is still not known, this work explored the connection between in vitro and in vivo behavior of tungsten microneedles through the study of interactions between biotic and abiotic factors. A hybrid computational approach, simultaneously using theoretical relationships and in silico models of nerves, was implemented to model the change of reliability varying the microneedle diameter, and to predict in vivo performances by using in vitro reliability and local differences between in vivo and in vitro mechanical response of nerves. - Highlights: • We provide phenomenological Finite Element (FE) models of peripheral nerves to study the interactions with W microneedles • We provide a general interaction-based approach to model the reliability of slender microneedles • We evaluate the reliability of W microneedels to puncture in vivo nerves • We provide a novel synergistic hybrid approach (theory + simulations) involving interactions among biotic and abiotic factors • We validate the hybrid approach by using experimental data from literature.

Interactions among biotic and abiotic factors affect the reliability of tungsten microneedles puncturing in vitro and in vivo peripheral nerves: A hybrid computational approach

International Nuclear Information System (INIS)

Sergi, Pier Nicola; Jensen, Winnie; Yoshida, Ken

2016-01-01

Tungsten is an elective material to produce slender and stiff microneedles able to enter soft tissues and minimize puncture wounds. In particular, tungsten microneedles are used to puncture peripheral nerves and insert neural interfaces, bridging the gap between the nervous system and robotic devices (e.g., hand prostheses). Unfortunately, microneedles fail during the puncture process and this failure is not dependent on stiffness or fracture toughness of the constituent material. In addition, the microneedles' performances decrease during in vivo trials with respect to the in vitro ones. This further effect is independent on internal biotic effects, while it seems to be related to external biotic causes. Since the exact synergy of phenomena decreasing the in vivo reliability is still not known, this work explored the connection between in vitro and in vivo behavior of tungsten microneedles through the study of interactions between biotic and abiotic factors. A hybrid computational approach, simultaneously using theoretical relationships and in silico models of nerves, was implemented to model the change of reliability varying the microneedle diameter, and to predict in vivo performances by using in vitro reliability and local differences between in vivo and in vitro mechanical response of nerves. - Highlights: • We provide phenomenological Finite Element (FE) models of peripheral nerves to study the interactions with W microneedles • We provide a general interaction-based approach to model the reliability of slender microneedles • We evaluate the reliability of W microneedels to puncture in vivo nerves • We provide a novel synergistic hybrid approach (theory + simulations) involving interactions among biotic and abiotic factors • We validate the hybrid approach by using experimental data from literature

Fast estimation of expected information gains for Bayesian experimental designs based on Laplace approximations

KAUST Repository

Long, Quan; Scavino, Marco; Tempone, Raul; Wang, Suojin

2013-01-01

Shannon-type expected information gain can be used to evaluate the relevance of a proposed experiment subjected to uncertainty. The estimation of such gain, however, relies on a double-loop integration. Moreover, its numerical integration in multi-dimensional cases, e.g., when using Monte Carlo sampling methods, is therefore computationally too expensive for realistic physical models, especially for those involving the solution of partial differential equations. In this work, we present a new methodology, based on the Laplace approximation for the integration of the posterior probability density function (pdf), to accelerate the estimation of the expected information gains in the model parameters and predictive quantities of interest. We obtain a closed-form approximation of the inner integral and the corresponding dominant error term in the cases where parameters are determined by the experiment, such that only a single-loop integration is needed to carry out the estimation of the expected information gain. To deal with the issue of dimensionality in a complex problem, we use a sparse quadrature for the integration over the prior pdf. We demonstrate the accuracy, efficiency and robustness of the proposed method via several nonlinear numerical examples, including the designs of the scalar parameter in a one-dimensional cubic polynomial function, the design of the same scalar in a modified function with two indistinguishable parameters, the resolution width and measurement time for a blurred single peak spectrum, and the boundary source locations for impedance tomography in a square domain. © 2013 Elsevier B.V.

Fast estimation of expected information gains for Bayesian experimental designs based on Laplace approximations

KAUST Repository

Long, Quan

2013-06-01

Shannon-type expected information gain can be used to evaluate the relevance of a proposed experiment subjected to uncertainty. The estimation of such gain, however, relies on a double-loop integration. Moreover, its numerical integration in multi-dimensional cases, e.g., when using Monte Carlo sampling methods, is therefore computationally too expensive for realistic physical models, especially for those involving the solution of partial differential equations. In this work, we present a new methodology, based on the Laplace approximation for the integration of the posterior probability density function (pdf), to accelerate the estimation of the expected information gains in the model parameters and predictive quantities of interest. We obtain a closed-form approximation of the inner integral and the corresponding dominant error term in the cases where parameters are determined by the experiment, such that only a single-loop integration is needed to carry out the estimation of the expected information gain. To deal with the issue of dimensionality in a complex problem, we use a sparse quadrature for the integration over the prior pdf. We demonstrate the accuracy, efficiency and robustness of the proposed method via several nonlinear numerical examples, including the designs of the scalar parameter in a one-dimensional cubic polynomial function, the design of the same scalar in a modified function with two indistinguishable parameters, the resolution width and measurement time for a blurred single peak spectrum, and the boundary source locations for impedance tomography in a square domain. © 2013 Elsevier B.V.

What School Teachers Expect from Conversational Pedagogic Agents?

Directory of Open Access Journals (Sweden)

Silvia TAMAYO

2017-10-01

Full Text Available Conversational Pedagogical Agents are interactive systems that teach students by assuming the role of teacher, student or companion through a natural language dialogue. If has been investigated a lot on the domains in which the agents can be used, the results in terms of educational effectiveness and level of satisfaction and motivation of the students. However, in the literature, there are not many examples of studies that reveal the opinion of school teachers on this type of educational technology. In this paper, we provide the results of a survey of 82 teachers to know what they expect from the agents. The following research questions will be answered: Q1 Do you know this educational technology? Q2 If so, are teachers used to integrate this type of technology in the classroom? and, P3 If teachers could design the agent, what characteristics do they consider to be the most appropriate? How should the agent react to different situations? From the results gathered, it is expected to provide information to all researchers, designers and teachers who want to integrate this type of educational technology in their classroom..

Expected Influence of Ethics on Product Development Process

Directory of Open Access Journals (Sweden)

Stig Larsson

2008-07-01

Full Text Available Product development efficiency and effectiveness is depending on a process being well executed. The actions of individuals included in the processes are influenced by the ethical and moral orientations that have been selected by each individual, whether this selection is conscious or not. This paper describes different ethical choices and the expected effects they may have on the development process exemplified by the product integration process for software products. The different frameworks analyzed are utilitarianism, rights ethics, duty ethics, virtue ethics and ethical egoism. The expected effects on the goals for product integration may be debated. This is a result in it self as it triggers discussions about ethical considerations and increase the awareness of the influence of moral decisions. Our conclusion is that the adherence to specific moral frameworks simplifies the alignment of actions to the practices described in product development models and standards and through this supports a more successful execution of product development projects. This conclusion is also confirmed through a comparison between the different directions and several codes of ethics for engineers issued by organizations such as IEEE as these combine features from several of the discussed ethical directions.

A predictive index of biotic integrity model for aquatic-vertebrate assemblages of Western U.S. streams

Science.gov (United States)

Because of natural environmental and faunal differences and scientific perspectives, numerous indices of biological integrity (IBIs) have been developed at local state, and regional scales in the USA. These multiple IBIs, plus different criteria for judging impairment, hinder ri...

Social-technical design for evaluation of student's behaviour and expectations

DEFF Research Database (Denmark)

John, Claudette; Kampf, Constance Elizabeth; Briollet, Alexandra

2015-01-01

. So, we focus here on the evaluation process based on socio-technical design that allows integrating student’s behaviour and expectations. A Web App has been constructed and tested on an exploratory basis to get real-time insights about the combination of theory, course and practical applications......This paper focuses on the usability of new technologies and real-time socio-technical features for evaluation issues in student’s courses. The evaluation of content and forms of knowledge taught within a course are directly linked to behaviour, perception and expectations from the student’s side...

Challenges for the development of a biotic ligand model predicting copper toxicity in estuaries and seas.

Science.gov (United States)

de Polo, Anna; Scrimshaw, Mark D

2012-02-01

An effort is ongoing to develop a biotic ligand model (BLM) that predicts copper (Cu) toxicity in estuarine and marine environments. At present, the BLM accounts for the effects of water chemistry on Cu speciation, but it does not consider the influence of water chemistry on the physiology of the organisms. We discuss how chemistry affects Cu toxicity not only by controlling its speciation, but also by affecting the osmoregulatory physiology of the organism, which varies according to salinity. In an attempt to understand the mechanisms of Cu toxicity and predict its impacts, we explore the hypothesis that the common factor linking the main toxic effects of Cu is the enzyme carbonic anhydrase (CA), because it is a Cu target with multiple functions and salinity-dependent expression and activity. According to this hypothesis, the site of action of Cu in marine fish may be not only the gill, but also the intestine, because in this tissue CA plays an important role in ion transport and water adsorption. Therefore, the BLM of Cu toxicity to marine fish should also consider the intestine as a biotic ligand. Finally, we underline the need to incorporate the osmotic gradient into the BLM calculations to account for the influence of physiology on Cu toxicity. Copyright © 2011 SETAC.

Process-Based Species Pools Reveal the Hidden Signature of Biotic Interactions Amid the Influence of Temperature Filtering.

Science.gov (United States)

Lessard, Jean-Philippe; Weinstein, Ben G; Borregaard, Michael K; Marske, Katharine A; Martin, Danny R; McGuire, Jimmy A; Parra, Juan L; Rahbek, Carsten; Graham, Catherine H

2016-01-01

A persistent challenge in ecology is to tease apart the influence of multiple processes acting simultaneously and interacting in complex ways to shape the structure of species assemblages. We implement a heuristic approach that relies on explicitly defining species pools and permits assessment of the relative influence of the main processes thought to shape assemblage structure: environmental filtering, dispersal limitations, and biotic interactions. We illustrate our approach using data on the assemblage composition and geographic distribution of hummingbirds, a comprehensive phylogeny and morphological traits. The implementation of several process-based species pool definitions in null models suggests that temperature-but not precipitation or dispersal limitation-acts as the main regional filter of assemblage structure. Incorporating this environmental filter directly into the definition of assemblage-specific species pools revealed an otherwise hidden pattern of phylogenetic evenness, indicating that biotic interactions might further influence hummingbird assemblage structure. Such hidden patterns of assemblage structure call for a reexamination of a multitude of phylogenetic- and trait-based studies that did not explicitly consider potentially important processes in their definition of the species pool. Our heuristic approach provides a transparent way to explore patterns and refine interpretations of the underlying causes of assemblage structure.

Effects of local biotic neighbors and habitat heterogeneity on tree and shrub seedling survival in an old-growth temperate forest.

Science.gov (United States)

Bai, Xuejiao; Queenborough, Simon A; Wang, Xugao; Zhang, Jian; Li, Buhang; Yuan, Zuoqiang; Xing, Dingliang; Lin, Fei; Ye, Ji; Hao, Zhanqing

2012-11-01

Seedling dynamics play a crucial role in determining species distributions and coexistence. Exploring causes of variation in seedling dynamics can therefore provide key insights into the factors affecting these phenomena. We examined the relative importance of biotic neighborhood processes and habitat heterogeneity using survival data for 5,827 seedlings in 39 tree and shrub species over 2 years from an old-growth temperate forest in northeastern China. We found significant negative density-dependence effects on survival of tree seedlings, and limited effects of habitat heterogeneity (edaphic and topographic variables) on survival of shrub seedlings. The importance of negative density dependence on young tree seedling survival was replaced by habitat in tree seedlings ≥ 4 years old. As expected, negative density dependence was more apparent in gravity-dispersed species compared to wind-dispersed and animal-dispersed species. Moreover, we found that a community compensatory trend existed for trees. Therefore, although negative density dependence was not as pervasive as in other forest communities, it is an important mechanism for the maintenance of community diversity in this temperate forest. We conclude that both negative density dependence and habitat heterogeneity drive seedling survival, but their relative importance varies with seedling age classes and species traits.

From success to persistence: Identifying an evolutionary regime shift in the diverse Paleozoic aquatic arthropod group Eurypterida, driven by the Devonian biotic crisis.

Science.gov (United States)

Lamsdell, James C; Selden, Paul A

2017-01-01

Mass extinctions have altered the trajectory of evolution a number of times over the Phanerozoic. During these periods of biotic upheaval a different selective regime appears to operate, although it is still unclear whether consistent survivorship rules apply across different extinction events. We compare variations in diversity and disparity across the evolutionary history of a major Paleozoic arthropod group, the Eurypterida. Using these data, we explore the group's transition from a successful, dynamic clade to a stagnant persistent lineage, pinpointing the Devonian as the period during which this evolutionary regime shift occurred. The late Devonian biotic crisis is potentially unique among the "Big Five" mass extinctions in exhibiting a drop in speciation rates rather than an increase in extinction. Our study reveals eurypterids show depressed speciation rates throughout the Devonian but no abnormal peaks in extinction. Loss of morphospace occupation is random across all Paleozoic extinction events; however, differential origination during the Devonian results in a migration and subsequent stagnation of occupied morphospace. This shift appears linked to an ecological transition from euryhaline taxa to freshwater species with low morphological diversity alongside a decrease in endemism. These results demonstrate the importance of the Devonian biotic crisis in reshaping Paleozoic ecosystems. © 2016 The Author(s). Evolution © 2016 The Society for the Study of Evolution.

A framework for evaluating the influence of climate, dispersal limitation, and biotic interactions using fossil pollen associations across the late Quaternary

DEFF Research Database (Denmark)

Blois, Jessica L.; Gotelli, Nicholas J.; Behrensmeyer, Anna K.

2014-01-01

Environmental conditions, dispersal lags, and interactions among species are major factors structuring communities through time and across space. Ecologists have emphasized the importance of biotic interactions in determining local patterns of species association. In contrast, abiotic limits, dis...

Relationships between biotic and abiotic factors and regeneration of chestnut oak, white oak, and northern red oak

Science.gov (United States)

Songlin Fei; Kim C. Steiner; James C. Finley; Marc E. McDill

2003-01-01

A series of substantial field surveys of 38 mixed-oak stands in central Pennsylvania were carried out during 1996-2000. All the stands were surveyed 1 year prior to harvest, and 16 stands have been surveyed 1 year after harvest. Three abiotic factors at stand scale, four abiotic factors at plot scale, and two biotic factors and one abiotic factor at subplot scale was...

Assessment and management of ecological integrity: Chapter 12

Science.gov (United States)

Kwak, Thomas J.; Freeman, Mary C.

2010-01-01

Assessing and understanding the impacts of human activities on aquatic ecosystems has long been a focus of ecologists, water resources managers, and fisheries scientists. While traditional fisheries management focused on single-species approaches to enhance fish stocks, there is a growing emphasis on management approaches at community and ecosystem levels. Of course, as fisheries managers shift their attention from narrow (e.g., populations) to broad organizational scales (e.g., communities or ecosystems), ecological processes and management objectives become more complex. At the community level, fisheries managers may strive for a fish assemblage that is complex, persistent, and resilient to disturbance. Aquatic ecosystem level objectives may focus on management for habitat quality and ecological processes, such as nutrient dynamics, productivity, or trophic interactions, but a long-term goal of ecosystem management may be to maintain ecological integrity. However, human users and social, economic, and political demands of fisheries management often result in a reduction of ecological integrity in managed systems, and this conflict presents a principal challenge for the modern fisheries manager. The concepts of biotic integrity and ecological integrity are being applied in fisheries science, natural resource management, and environmental legislation, but explicit definitions of these terms are elusive. Biotic integrity of an ecosystem may be defined as the capability of supporting and maintaining an integrated, adaptive community of organisms having a species composition, diversity, and functional organization comparable to that of a natural habitat of the region (Karr and Dudley 1981). Following that, ecological integrity is the summation of chemical, physical, and biological integrity. Thus, the concept of ecological integrity extends beyond fish and represents a holistic approach for ecosystem management that is especially applicable to aquatic systems. The

The net effect of abiotic conditions and biotic interactions in a semi-arid ecosystem NE Spain: implications for the management and restoration.

Science.gov (United States)

Pueyo, Yolanda; Arroyo, Antonio I.; Saiz, Hugo; Alados, Concepción L.

2014-05-01

Degradation in arid and semiarid lands can be irreversible without human intervention, due to a positive plant-soil feedback where the loss of vegetation cover leads to soil degradation, which in turn hampers plant establishment. Human intervention in restoration actions usually involves the amendment of the degraded abiotic conditions, revegetation of bare areas, or both. However, abiotic amelioration is often expensive and too intrusive, and revegetation is not successful in many cases. Biotic interactions between plants, and more specifically facilitation by a "nurse" plant, have been proposed as a new via to take profit of improved abiotic conditions without intervention, and to increase the success rate of revegetation actions. But "nurse" plants can also interfere with others (i.e. by competition for resources or the release of allelopathic compounds), and the net balance between facilitation and interference could depend on plant types involved. We present recent observational and experimental studies performed in the semiarid ecosystems of the Middle Ebro Valley (NE Spain) about the role of abiotic conditions and biotic interactions in the productivity, dynamics and diversity of plant communities under different stress conditions (aridity and grazing). We found that all plant types studied (shrubs and perennial grasses) improved abiotic conditions (soil temperature and water availability for plants) with respect to open areas. However, only some shrubs (mainly Salsola vermiculata) had a positive net balance in the biotic interactions between plants, while other shrubs (Artemisia herba-alba) and perennial grasses (Lygeum spartum) showed interference with other plants. Moreover, the net balance between facilitation and interference among plants in the community shifted from competitive to neutral or from neutral to facilitative with increasing aridity. Grazing status did not strongly change the net biotic interactions between plants. Our results suggest that

Coral Reef Functioning Along a Cross‐shelf Environmental Gradient: Abiotic and Biotic Drivers of Coral Reef Growth in the Red Sea

KAUST Repository

Roik, Anna

2016-06-01

Despite high temperature and salinity conditions that challenge reef growth in other oceans, the Red Sea maintains amongst the most biodiverse and productive coral reefs worldwide. It is therefore an important region for the exploration of coral reef functioning, and expected to contribute valuable insights towards the understanding of coral reefs in challenging environments. This dissertation assessed the baseline variability of in situ abiotic conditions (temperature, dissolved oxygen, pH, and total alkalinity, among others) in the central Red Sea and highlights these environmental regimes in a global context. Further, focus was directed on biotic factors (biofilm community dynamics, calcification and bioerosion), which underlie reef growth processes and are crucial for maintaining coral reef functioning and ecosystem services. Using full‐year data from an environmental cross‐shelf gradient, the dynamic interplay of abiotic and biotic factors was investigated. In situ observations demonstrate that central Red Sea coral reefs were highly variable on spatial, seasonal, and diel scales, and exhibited comparably high temperature, high salinity, and low dissolved oxygen levels, which on the one hand reflect future ocean predictions. Under these conditions epilithic bacterial and algal assemblages were mainly driven by variables (i.e., temperature, salinity, dissolved oxygen) which are predicted to change strongly in the progression of global climate change, implying an influential bottom up effect on reef‐building communities. On the other hand, measured alkalinity and other carbonate chemistry value were close to the estimates of preindustrial global ocean surface water and thus in favor of reef growth processes. Despite this beneficial carbonate chemistry, calcification and carbonate budgets in the reefs were not higher than in other coral reef regions. In this regard, seasonal calcification patterns suggest that summer temperatures may be exceeding the optima

The Integrated Renovation Process

DEFF Research Database (Denmark)

Galiotto, Nicolas; Heiselberg, Per; Knudstrup, Mary-Ann

The Integrated Renovation Process (IRP) is a user customized methodology based on judiciously selected constructivist and interactive multi-criteria decision making methods (Galiotto, Heiselberg, & Knudstrup, 2014 (expected)). When applied for home renovation, the Integrated Renovation Process...

Utilizing genetic diversity in the desert watermelon citrullus colocynthis for enhancing watermelon cultivars for resistance to biotic and abiotic stress

Science.gov (United States)

Wide genetic diversity exists among the desert watermelon Citrullus colocynthis (L.) Schrad. (CC) accessions collected in the deserts of northern Africa, the Middle East, and Asia. Because of their resistance to biotic and abiotic stresses, there can be a viable source of genes used for enhancing wa...

Predicting Problem Behaviors with Multiple Expectancies: Expanding Expectancy-Value Theory

Science.gov (United States)

Borders, Ashley; Earleywine, Mitchell; Huey, Stanley J.

2004-01-01

Expectancy-value theory emphasizes the importance of outcome expectancies for behavioral decisions, but most tests of the theory focus on a single behavior and a single expectancy. However, the matching law suggests that individuals consider expected outcomes for both the target behavior and alternative behaviors when making decisions. In this…

The method of expected number of deaths, 1786-1886-1986.

Science.gov (United States)

Keiding, N

1987-04-01

"The method of expected number of deaths is an integral part of standardization of vital rates, which is one of the oldest statistical techniques. The expected number of deaths was calculated in 18th century actuarial mathematics...but the method seems to have been forgotten, and was reinvented in connection with 19th century studies of geographical and occupational variations of mortality.... It is noted that standardization of rates is intimately connected to the study of relative mortality, and a short description of very recent developments in the methodology of that area is included." (SUMMARY IN FRE) excerpt

More in hope than expectation: a systematic review of women's expectations and experience of pain relief in labour

Directory of Open Access Journals (Sweden)

Macphail Sheila

2008-03-01

Full Text Available Abstract Background Childbirth is one of the most painful events that a woman is likely to experience, the multi-dimensional aspect and intensity of which far exceeds disease conditions. A woman's lack of knowledge about the risks and benefits of the various methods of pain relief can heighten anxiety. Women are increasingly expected, and are expecting, to participate in decisions about their healthcare. Involvement should allow women to make better-informed decisions; the National Institute for Clinical Excellence has stated that we need effective ways of supporting pregnant women in making informed decisions during labour. Our aim was to systematically review the empirical literature on women's expectations and experiences of pain and pain relief during labour, as well as their involvement in the decision-making process. Methods A systematic review was conducted using the following databases: Medical Literature Analysis and Retrieval System Online (MEDLINE, Cumulative Index to Nursing and Allied Health Literature (CINAHL, Bath Information and Database Service (BIDS, Excerpta Medica Database Guide (EMBASE, Midwives Information and Resource (MIDIRS, Sociological Abstracts and PsychINFO. Studies that examined experience and expectations of pain, and its relief in labour, were appraised and the findings were integrated into a systematic review. Results Appraisal revealed four key themes: the level and type of pain, pain relief, involvement in decision-making and control. Studies predominantly showed that women underestimated the pain they would experience. Women may hope for a labour free of pain relief, but many found that they needed or benefited from it. There is a distinction between women's desire for a drug-free labour and the expectation that they may need some sort of pain relief. Inaccurate or unrealistic expectations about pain may mean that women are not prepared appropriately for labour. Many women acknowledged that they wanted to

A new full-field interferometry approach for counting and differentiating aquatic biotic nanoparticles (Conference Presentation)

Science.gov (United States)

Boccara, A. Claude; Fedala, Yasmina; Voronkoff, Justine; Paffoni, Nina; Boccara, Martine

2017-03-01

Due to the huge abundance and the major role that viruses and membrane vesicles play in the seas or rivers ecosystems it is necessary to develop simple, sensitive, compact and reliable methods for their detection and characterization. Our approach is based on the measurement of the weak light level scattered by the biotic nanoparticles. We describe a new full-field, incoherently illuminated, shot-noise limited, common-path interferometric detection method coupled with the analysis of Brownian motion to detect, quantify, and differentiate biotic nanoparticles. The last developments take advantage of a new fast (700 Hz) camera with 2 Me- full well capacity that improves the signal to noise ratio and increases the precision of the Brownian motion characterization. We validated the method with calibrated nanoparticles and homogeneous DNA or RNA.viruses. The smallest virus size that we characterized with a suitable signal-to-noise ratio was around 30 nm in diameter with a target towards the numerous 20 nm diameter viruses. We show for the first time anisotropic trajectories for myoviruses meaning that there is a memory of the initial direction of their Brownian motions. Significant improvements have been made in the handling of the sample as well as in the statistical analysis for differentiating the various families of vesicles and virus. We further applied the method for vesicles detection and for analysis of coastal and oligotrophic samples from Tara Oceans circumnavigation as well of various rivers.

TaWRKY68 responses to biotic stresses are revealed by the orthologous genes from major cereals

Directory of Open Access Journals (Sweden)

Bo Ding

2014-01-01

Full Text Available WRKY transcription factors have been extensively characterized in the past 20 years, but in wheat, studies onWRKY genes and their function are lagging behind many other species. To explore the function of wheat WRKY genes, we identified a TaWRKY68 gene from a common wheat cultivar. It encodes a protein comprising 313 amino acids which harbors 19 conserved motifs or active sites. Gene expression patterns were determined by analyzing microarray data of TaWRKY68 in wheat and of orthologous genes from maize, rice and barley using Genevestigator. TaWRKY68 orthologs were identified and clustered using DELTA-BLAST and COBALT programs available at NCBI. The results showed that these genes, which are expressed in all tissues tested, had relatively higher levels in the roots and were up-regulated in response to biotic stresses. Bioinformatics results were confirmed by RT-PCR experiments using wheat plants infected by Agrobacterium tumefaciens and Blumeria graminis, or treated with Deoxynivalenol, a Fusarium graminearum-induced mycotoxin in wheat or barley. In summary,TaWRKY68 functions differ during plant developmental stages and might be representing a hub gene function in wheat responses to various biotic stresses. It was also found that including data from major cereal genes in the bioinformatics analysis gave more accurate and comprehensive predictions of wheat gene functions.

The Grape VlWRKY3 Gene Promotes Abiotic and Biotic Stress Tolerance in Transgenic Arabidopsis thaliana

Directory of Open Access Journals (Sweden)

Rongrong Guo

2018-04-01

Full Text Available WRKY transcription factors are known to play important roles in plant responses to various abiotic and biotic stresses. The grape WRKY gene, WRKY3 was previously reported to respond to salt and drought stress, as well as methyl jasmonate and ethylene treatments in Vitis labrusca × V. vinifera cv. ‘Kyoho.’ In the current study, WRKY3 from the ‘Kyoho’ grape cultivar was constitutively expressed in Arabidopsis thaliana under control of the cauliflower mosaic virus 35S promoter. The 35S::VlWRKY3 transgenic A. thaliana plants showed improved salt and drought stress tolerance during the germination, seedling and the mature plant stages. Various physiological traits related to abiotic stress responses were evaluated to gain further insight into the role of VlWRKY3, and it was found that abiotic stress caused less damage to the transgenic seedlings than to the wild-type (WT plants. VlWRKY3 over-expression also resulted in altered expression levels of abiotic stress-responsive genes. Moreover, the 35S::VlWRKY3 transgenic A. thaliana lines showed improved resistance to Golovinomyces cichoracearum, but increased susceptibility to Botrytis cinerea, compared with the WT plants. Collectively, these results indicate that VlWRKY3 plays important roles in responses to both abiotic and biotic stress, and modification of its expression may represent a strategy to enhance stress tolerance in crops.

Variation in the effectiveness of biotic defence: the case of an opportunistic ant-plant protection mutualism.

Science.gov (United States)

Giusto, Bruno; Anstett, Marie-Charlotte; Dounias, Edmond; McKey, Doyle B

2001-11-01

Benefits to plants in facultative ant protection mutualisms are highly variable. This allows examination of the sources of this variation and the mechanisms by which ants protect plants. We studied opportunistic interactions between ants and an extrafloral nectary-bearing vine, Dioscorea praehensilis, during 3 different years. Variation in plant protection among years was striking. Several factors affected the effectiveness of the biotic defence. Stems recently emerged from the underground tuber were self-supporting, contacting no other plants and encountering few foraging ants. Stems then became lianescent, and contact with supporting plants greatly increased ant recruitment. Both species and number of ant workers influenced the effect of ants on the major herbivore, the chrysomelid beetle Lilioceris latipennis. Protective actions included limitation of oviposition (reduction in the number of eggs laid on the plant) and predation, leading to increased larval mortality. The probability of successful predation was strongly dependent on larval size. If temporarily low ant-patrolling activity allows larvae to grow beyond a critical size, their mechanical (thick integument) or chemical (plant-derived compounds in a fecal shield) defences become more effective against ants. Secondary metabolites derived from the host plant thus appear to be important for the anti-predator mechanisms of this beetle, being necessary for its survival and reproduction on a host plant that actively recruits ants as a biotic defence against herbivores.

Integration between manufacturers and third party logistics providers?

DEFF Research Database (Denmark)

Mortensen, Ole; Lemoine, Olga W.

2008-01-01

Purpose - The purpose of this study is to analyse the extent of the integration between manufacturers and third party logistics (TPL) providers at present and how the integration is expected to develop in the near future. The focus is on studying what tasks are part of the cooperation, what...... of the eight business processes studied. Further integration in the same processes is expected, based on ICT tools and with a focus on cost. ICT competences are primarily seen as a qualifier not a differentiator. Because the future TPL industry is expected to be characterised by more standardised services...

Integrated monitoring and information systems for managing aquatic invasive species in a changing climate

Science.gov (United States)

Lee, Henry; Reusser, Deborah A.; Olden, Julian D.; Smith, Scott S.; Graham, Jim; Burkett, Virginia; Dukes, Jeffrey S.; Piorkowski, Robert J.; Mcphedran, John

2008-01-01

Changes in temperature, precipitation, and other climatic drivers and sea-level rise will affect populations of existing native and non-native aquatic species and the vulnerability of aquatic environments to new invasions. Monitoring surveys provide the foundation for assessing the combined effects of climate change and invasions by providing baseline biotic and environmental conditions, although the utility of a survey depends on whether the results are quantitative or qualitative, and other design considerations. The results from a variety of monitoring programs in the United States are available in integrated biological information systems, although many include only non-native species, not native species. Besides including natives, we suggest these systems could be improved through the development of standardized methods that capture habitat and physiological requirements and link regional and national biological databases into distributed Web portals that allow drawing information from multiple sources. Combining the outputs from these biological information systems with environmental data would allow the development of ecological-niche models that predict the potential distribution or abundance of native and non-native species on the basis of current environmental conditions. Environmental projections from climate models can be used in these niche models to project changes in species distributions or abundances under altered climatic conditions and to identify potential high-risk invaders. There are, however, a number of challenges, such as uncertainties associated with projections from climate and niche models and difficulty in integrating data with different temporal and spatial granularity. Even with these uncertainties, integration of biological and environmental information systems, niche models, and climate projections would improve management of aquatic ecosystems under the dual threats of biotic invasions and climate change

Can expectations produce symptoms from infrasound associated with wind turbines?

Science.gov (United States)

Crichton, Fiona; Dodd, George; Schmid, Gian; Gamble, Greg; Petrie, Keith J

2014-04-01

The development of new wind farms in many parts of the world has been thwarted by public concern that subaudible sound (infrasound) generated by wind turbines causes adverse health effects. Although the scientific evidence does not support a direct pathophysiological link between infrasound and health complaints, there is a body of lay information suggesting a link between infrasound exposure and health effects. This study tested the potential for such information to create symptom expectations, thereby providing a possible pathway for symptom reporting. A sham-controlled double-blind provocation study, in which participants were exposed to 10 min of infrasound and 10 min of sham infrasound, was conducted. Fifty-four participants were randomized to high- or low-expectancy groups and presented audiovisual information, integrating material from the Internet, designed to invoke either high or low expectations that exposure to infrasound causes specified symptoms. High-expectancy participants reported significant increases, from preexposure assessment, in the number and intensity of symptoms experienced during exposure to both infrasound and sham infrasound. There were no symptomatic changes in the low-expectancy group. Healthy volunteers, when given information about the expected physiological effect of infrasound, reported symptoms that aligned with that information, during exposure to both infrasound and sham infrasound. Symptom expectations were created by viewing information readily available on the Internet, indicating the potential for symptom expectations to be created outside of the laboratory, in real world settings. Results suggest psychological expectations could explain the link between wind turbine exposure and health complaints.

SEWAGE DECOMPOSITION IN AMBIENT WATER: INFLUENCE OF SOLARRADIATION AND BIOTIC INTERACTIONS ON MICROORGANISM COMMUNITIES AND BACTEROIDALES REAL-TIME QUANTITATIVE PCR MEASUREMENTS - poster

Science.gov (United States)

AIMS: Sewage and ambient water both consist of a highly complex array of bacteria and eukaryotic microbes. When these communities are mixed, solar radiation and biotic interactions (predation and competition) can influence pathogen decay based on experiments targeting indicator ...

Challenges for the development of a biotic ligand model predicting copper toxicity in estuaries and seas

OpenAIRE

de Polo, A; Scrimshaw, MD

2012-01-01

This is the author's accepted manuscript. The final published article is available from the link below. Copyright @ 2011 SETAC. An effort is ongoing to develop a biotic ligand model (BLM) that predicts copper (Cu) toxicity in estuarine and marine environments. At present, the BLM accounts for the effects of water chemistry on Cu speciation, but it does not consider the influence of water chemistry on the physiology of the organisms. We discuss how chemistry affects Cu toxicity not only by ...

Selected Abiotic and Biotic Environmental Stress Factors Affecting Two Economically Important Sugarcane Stalk Boring Pests in the United States

Directory of Open Access Journals (Sweden)

Allan T. Showler

2016-02-01

Full Text Available Sugarcane, Saccharum spp., in the United States is attacked by a number of different arthropod pests. The most serious among those pests are two stalk boring moths in the Family Crambidae: the sugarcane borer, Diatraea saccharalis (F., and the Mexican rice borer, Eoreuma loftini (Dyar. The two species are affected by abiotic and biotic environmental stress factors. Water deficit and excessive soil nitrogen alter physical and physiochemical aspects of the sugarcane plant that make the crop increasingly vulnerable to E. loftini. Weed growth can be competitive with sugarcane but it also supports enhanced abundances and diversity of natural enemies that can suppress infestations of D. saccharalis. In an instance where the stalk borer is considered a stress factor, proximity of vulnerable crops to sugarcane can influence levels of E. loftini infestation of sugarcane. The adverse effects of each stress factor, in terms of stalk borer attack, can be reduced by adopting appropriate cultural practices, such as adequate irrigation, judicious use of nitrogen fertilizer, using noncompetitive weed growth, and not planting vulnerable crops near sugarcane fields. Understanding the relationships between stress factors and crop pests can provide valuable insights for plant breeders and tools for incorporation into integrated pest management strategies.

Misconceptions and false expectations in neutral evolution

Directory of Open Access Journals (Sweden)

CARLOS Y. VALENZUELA

2000-01-01

Full Text Available Neutral evolution results from random recurrent mutation and genetic drift. A small part of random evolution, that which is related to protein or DNA polymorphisms, is the subject of the Neutral Theory of Evolution. One of the foundations of this theory is the demonstration that the mutation rate (m is equal to the substitution rate. Since both rates are independent of population size, they are independent of drift, which is dependent upon population size. Neutralists have erroneously equated the substitution rate with the fixation rate, despite the fact that they are antithetical conceptions. The neutralists then applied the random walk stochastic model to justify alleles or bases that were fixated or eliminated. In this model, once the allele or base frequencies reach the monomorphic states (values of 1.0 or 0.0, the absorbing barriers, they can no longer return to the polymorphic state. This operates in a pure mathematical model. If recurrent mutation occurs (as in biotic real systems fixation and elimination are impossible. A population of bacteria in which m=10-8 base mutation (or substitution/site/generation and the reproduction rate is 1000 cell cycle/year should replace all its genome bases in approximately 100,000 years. The expected situation for all sites is polymorphism for the four bases rather than monomorphism at 1.0 or 0.0 frequencies. If fixation and elimination of a base for more than 500,000 years are impossible, then most of the neutral theory is untenable. A new complete neutral model, which allows for recurrent substitutions, is proposed here based on recurrent mutation or substitution and drift alone. The model fits a binomial or Poisson distribution and not a geometric one, as does neutral theory.

Evolutionary Expectations

DEFF Research Database (Denmark)

Nash, Ulrik William

2014-01-01

, they are correlated among people who share environments because these individuals satisfice within their cognitive bounds by using cues in order of validity, as opposed to using cues arbitrarily. Any difference in expectations thereby arise from differences in cognitive ability, because two individuals with identical...... cognitive bounds will perceive business opportunities identically. In addition, because cues provide information about latent causal structures of the environment, changes in causality must be accompanied by changes in cognitive representations if adaptation is to be maintained. The concept of evolutionary......The concept of evolutionary expectations descends from cue learning psychology, synthesizing ideas on rational expectations with ideas on bounded rationality, to provide support for these ideas simultaneously. Evolutionary expectations are rational, but within cognitive bounds. Moreover...

Expectations on Track? High School Tracking and Adolescent Educational Expectations

DEFF Research Database (Denmark)

Karlson, Kristian Bernt

2015-01-01

This paper examines the role of adaptation in expectation formation processes by analyzing how educational tracking in high schools affects adolescents' educational expectations. I argue that adolescents view track placement as a signal about their academic abilities and respond to it in terms...... of modifying their educational expectations. Applying a difference-in-differences approach to the National Educational Longitudinal Study of 1988, I find that being placed in an advanced or honors class in high school positively affects adolescents’ expectations, particularly if placement is consistent across...... subjects and if placement contradicts tracking experiences in middle school. My findings support the hypothesis that adolescents adapt their educational expectations to ability signals sent by schools....

Interactive influence of biotic and abiotic cues on the plasticity of preferred body temperatures in a predator–prey system

Czech Academy of Sciences Publication Activity Database

Smolinský, Radovan; Gvoždík, Lumír

2012-01-01

Roč. 170, č. 1 (2012), s. 47-55 ISSN 0029-8549 R&D Projects: GA ČR GAP506/10/2170; GA MŠk LC06073 Institutional research plan: CEZ:AV0Z60930519 Institutional support: RVO:68081766 Keywords : Aeshna * Biotic interactions * Preferred temperature * Reciprocal plasticity * Thermal acclimation * Triturus Subject RIV: EG - Zoology Impact factor: 3.011, year: 2012

Social gradient in life expectancy and health expectancy in Denmark

DEFF Research Database (Denmark)

Brønnum-Hansen, Henrik; Andersen, Otto; Kjøller, Mette

2004-01-01

Health status of a population can be evaluated by health expectancy expressed as average lifetime in various states of health. The purpose of the study was to compare health expectancy in population groups at high, medium and low educational levels.......Health status of a population can be evaluated by health expectancy expressed as average lifetime in various states of health. The purpose of the study was to compare health expectancy in population groups at high, medium and low educational levels....

Invasion by non-native brook trout in Panther Creek, Idaho: Roles of habitat quality, biotic resistance, and connectivity to source habitats

Science.gov (United States)

Joseph R. Benjamin; Jason B. Dunham; Matthew R. Dare

2007-01-01

Theoretical models and empirical evidence suggest that the invasion of nonnative species in freshwaters is facilitated through the interaction of three factors: habitat quality, biotic resistance, and connectivity. We measured variables that represented each factor to determine which were associated with the occurrence of nonnative brook trout Salvelinus...

Expecting the unexpected

DEFF Research Database (Denmark)

Mcneill, Ilona M.; Dunlop, Patrick D.; Heath, Jonathan B.

2013-01-01

People who live in wildfire-prone communities tend to form their own hazard-related expectations, which may influence their willingness to prepare for a fire. Past research has already identified two important expectancy-based factors associated with people's intentions to prepare for a natural......) and measured actual rather than intended preparedness. In addition, we tested the relation between preparedness and two additional threat-related expectations: the expectation that one can rely on an official warning and the expectation of encountering obstacles (e.g., the loss of utilities) during a fire...

Meta-transcriptomics indicates biotic cross-tolerance in willow trees cultivated on petroleum hydrocarbon contaminated soil.

Science.gov (United States)

Gonzalez, Emmanuel; Brereton, Nicholas J B; Marleau, Julie; Guidi Nissim, Werther; Labrecque, Michel; Pitre, Frederic E; Joly, Simon

2015-10-12

High concentrations of petroleum hydrocarbon (PHC) pollution can be hazardous to human health and leave soils incapable of supporting agricultural crops. A cheap solution, which can help restore biodiversity and bring land back to productivity, is cultivation of high biomass yielding willow trees. However, the genetic mechanisms which allow these fast-growing trees to tolerate PHCs are as yet unclear. Salix purpurea 'Fish Creek' trees were pot-grown in soil from a former petroleum refinery, either lacking or enriched with C10-C50 PHCs. De novo assembled transcriptomes were compared between tree organs and impartially annotated without a priori constraint to any organism. Over 45% of differentially expressed genes originated from foreign organisms, the majority from the two-spotted spidermite, Tetranychus urticae. Over 99% of T. urticae transcripts were differentially expressed with greater abundance in non-contaminated trees. Plant transcripts involved in the polypropanoid pathway, including phenylalanine ammonia-lyase (PAL), had greater expression in contaminated trees whereas most resistance genes showed higher expression in non-contaminated trees. The impartial approach to annotation of the de novo transcriptomes, allowing for the possibility for multiple species identification, was essential for interpretation of the crop's response treatment. The meta-transcriptomic pattern of expression suggests a cross-tolerance mechanism whereby abiotic stress resistance systems provide improved biotic resistance. These findings highlight a valuable but complex biotic and abiotic stress response to real-world, multidimensional contamination which could, in part, help explain why crops such as willow can produce uniquely high biomass yields on challenging marginal land.

Accounting for biotic spatial variability in fields: Case of resistance screening against sunflower Verticillium wilt.

Science.gov (United States)

Missonnier, Hélène; Jacques, Alban; Bang, JiSu; Daydé, Jean; Mirleau-Thebaud, Virginie

2017-01-01

In breeding for disease resistance, the magnitude of the genetic response is difficult to appreciate because of environmental stresses that interact with the plant genotype. We discuss herein the fundamental problems in breeding for disease resistance with the aim being to better understand the interactions between plant, pathogen, and spatial patterns. The goal of this study is to fine tune breeding decisions by incorporating spatial patterns of such biotic factors into the definition of disease-occurrence probability. We use a preexisting statistics method based on geostatistics for a descriptive analysis of biotic factors for trial quality control. The plant-population structure used for spatial-pattern analysis consists of two F1-hybrid cultivars, defined as symptomatic and asymptomatic controls with respect to the studied pathogen. The controls are inserted at specific locations to establish a grid arrangement over the field that include the F1-hybrid cultivars under evaluation. We characterize the spatial structure of the pathogen population and of the general plant environment-with undetermined but present abiotic constraints-not by using direct notation such as flower time or rainfall but by using plant behavior (i.e., leaf symptom severity, indirect notation). The analysis indicates areas with higher or lower risk of disease and reveals a correlation between the symptomatic control and the effective level of disease for sunflowers. This result suggests that the pathogen and/or abiotic components are major factors in determining the probability that a plant develops the disease, which could lead to a misinterpretation of plant resistance.

Browse Title Index

African Journals Online (AJOL)

weighted Index of Biotic Integrity (SIBI) for use in the assessment of biotic integrity in the Klip River, Gauteng, South Africa, Abstract. P J Kotze, G J Steyn, H H du Preez, C J Kleynhans. Vol 40, No 4 (2015), Diatoms as water ...

Unequal Expectations

DEFF Research Database (Denmark)

Karlson, Kristian Bernt

the role of causal inference in social science; and it discusses the potential of the findings of the dissertation to inform educational policy. In Chapters II and III, constituting the substantive contribution of the dissertation, I examine the process through which students form expectations...... of the relation between the self and educational prospects; evaluations that are socially bounded in that students take their family's social position into consideration when forming their educational expectations. One important consequence of this learning process is that equally talented students tend to make...... for their educational futures. Focusing on the causes rather than the consequences of educational expectations, I argue that students shape their expectations in response to the signals about their academic performance they receive from institutionalized performance indicators in schools. Chapter II considers...

A Weakest Pre-Expectation Semantics for Mixed-Sign Expectations

OpenAIRE

Kaminski, Benjamin Lucien; Katoen, Joost-Pieter

2017-01-01

We present a weakest-precondition-style calculus for reasoning about the expected values (pre-expectations) of \\emph{mixed-sign unbounded} random variables after execution of a probabilistic program. The semantics of a while-loop is well-defined as the limit of iteratively applying a functional to a zero-element just as in the traditional weakest pre-expectation calculus, even though a standard least fixed point argument is not applicable in this context. A striking feature of our semantics i...

Differentiating biotic from abiotic methane genesis in hydrothermally active planetary surfaces.

Science.gov (United States)

Oze, Christopher; Jones, L Camille; Goldsmith, Jonas I; Rosenbauer, Robert J

2012-06-19

Molecular hydrogen (H(2)) is derived from the hydrothermal alteration of olivine-rich planetary crust. Abiotic and biotic processes consume H(2) to produce methane (CH(4)); however, the extent of either process is unknown. Here, we assess the temporal dependence and limit of abiotic CH(4) related to the presence and formation of mineral catalysts during olivine hydrolysis (i.e., serpentinization) at 200 °C and 0.03 gigapascal. Results indicate that the rate of CH(4) production increases to a maximum value related to magnetite catalyzation. By identifying the dynamics of CH(4) production, we kinetically model how the H(2) to CH(4) ratio may be used to assess the origin of CH(4) in deep subsurface serpentinization systems on Earth and Mars. Based on our model and available field data, low H(2)/CH(4) ratios (less than approximately 40) indicate that life is likely present and active.

Correlation between macrobenthic structure (biotic) and water-sediment characteristics (abiotic) adjacent aquaculture areas at Tembelas Island, indonesia

Science.gov (United States)

Sharani, Jeanny; Hidayat, Jafron W.; Putro, Sapto P.

2018-05-01

Macrobenthic community play important role in sedimentary habitats as a part of food chain. Their structure may be influenced by environmental characteristic spatially and temporally. The purpose of this study is to access the correlation between macrobenthic structure (biotic) and water-sediment characteristics (abiotic) adjacent aquaculture areas at Tembelas Island, Indonesia. Water and sediments samples were taken twice, where the first and second sampling time were taken in June and October 2016, respectively. Samples were taken in the area of fish farming at coastal area of policulture/IMTA (as Location I), site of 1 km away from fish farming area as a reference site (as Location II), and monoculture sites (as Location III), with three stations for each location. Data of abiotic parameters included the composition of sediment substrate and DO, pH, salinity, temperature, and. Sediment samples were taken using Ekman grab. The organisms were 1 mm -size sieved and fixed using 10% formalin for further analysis, i.e. sorting, preserving, enumerating, identifying, and grouping. The relationship between biotics (macrobentos) and abiotics (physical-chemical factors) was assessed using a non-parametric multivariate procedure (BIOENV). This study found 61 species consisting of 46 families and 5 classes of macrobenthos. The most common classes were member of Mollusca and Polychaeta. Total nitrogen, silt, and clay were the abiotic factors most influencing macrobenthic structure (BIO-ENV; r = 0.46; R2 = 21.16%).

Integrating succession and community assembly perspectives.

Science.gov (United States)

Chang, Cynthia; HilleRisLambers, Janneke

2016-01-01

Succession and community assembly research overlap in many respects, such as through their focus on how ecological processes like dispersal, environmental filters, and biotic interactions influence community structure. Indeed, many recent advances have been made by successional studies that draw on modern analytical techniques introduced by contemporary community assembly studies. However, community assembly studies generally lack a temporal perspective, both on how the forces structuring communities might change over time and on how historical contingency (e.g. priority effects and legacy effects) and complex transitions (e.g. threshold effects) might alter community trajectories. We believe a full understanding of the complex interacting processes that shape community dynamics across large temporal scales can best be achieved by combining concepts, tools, and study systems into an integrated conceptual framework that draws upon both succession and community assembly theory.

Generalized expectation with general kernels on g-semirings and its applications

Czech Academy of Sciences Publication Activity Database

Agahi, H.; Mesiar, Radko; Babakhani, A.

2017-01-01

Roč. 111, č. 3 (2017), s. 863-875 ISSN 1578-7303 Institutional support: RVO:67985556 Keywords : Fractional integral * g-expectation * Jensen’s inequality * Probability theory Subject RIV: BA - General Mathematics OBOR OECD: Pure mathematics Impact factor: 0.690, year: 2016 http://library.utia.cas.cz/separaty/2017/E/mesiar-0477104.pdf

Expectation values of local fields in the Bullough-Dodd model and integrable perturbed conformal field theories

International Nuclear Information System (INIS)

Fateev, V.; Lukyanov, S.; Zamolodchikov, A.; Zamolodchikov, A.

1998-01-01

Exact expectation values of the fields e aφ in the Bullough-Dodd model are derived by adopting the ''''reflection relations'''' which involve the reflection S-matrix of the Liouville theory, as well as a special analyticity assumption. Using this result we propose explicit expressions for expectation values of all primary operators in the c 1,2 or Φ 2,1 . Some results concerning the Φ 1,5 perturbed minimal models are also presented. (orig.)

Performance of some biotic indices in the real variable world: A case study at different spatial scales in North-Western Mediterranean Sea

International Nuclear Information System (INIS)

Tataranni, Mariella; Lardicci, Claudio

2010-01-01

The aim of this study was to analyse the variability of four different benthic biotic indices (AMBI, BENTIX, H', M-AMBI) in two marine coastal areas of the North-Western Mediterranean Sea. In each coastal area, 36 replicates were randomly selected according to a hierarchical sampling design, which allowed estimating the variance components of the indices associated with four different spatial scales (ranging from metres to kilometres). All the analyses were performed at two different sampling periods in order to evaluate if the observed trends were consistent over the time. The variance components of the four indices revealed complex trends and different patterns in the two sampling periods. These results highlighted that independently from the employed index, a rigorous and appropriate sampling design taking into account different scales should always be used in order to avoid erroneous classifications and to develop effective monitoring programs. - How heterogeneous distribution of macrobenthos can affect the performance of some biotic indices.

Influence of Agricultural Practices on Biotic Production Potential and Climate Regulation Potential. A Case Study for Life Cycle Assessment of Soybean (Glycine max in Argentina

Directory of Open Access Journals (Sweden)

Roxana Piastrellini

2015-04-01

Full Text Available The aim of this study is to determine the impact potential of land use on biotic production and climate regulation in the agricultural phase of a product, taking into account the varied soil and crop management. Land occupation and transformation impacts of soybean production in Argentina for different agricultural systems are evaluated. The results indicate that the magnitude of occupation and transformation impacts is considerably reduced by implementing no-tillage instead of conventional tillage. Nevertheless, the methodologies adopted are unable to show any of the expected differences between rainfed or irrigation systems, crop sequences and delays in seed-planting, due to failures in the specific characterization factors. On the other hand, an uncertainty is demonstrated by the results associated with the choice of regeneration time corresponding to the different ecoregions over which soybean cultivation extends across the country. One of the recommendations that comes to the fore is to consider in the characterization factors increments in the soil organic carbon stock and in the mineralization rates, associated with the presence of the preceding crop and the greater availability of water in the soil of irrigated systems.

Are Stock and Corporate Bond Markets Integrated?

NARCIS (Netherlands)

van Zundert, J.; Driessen, Joost

2017-01-01

This study explores the cross-sectional integration of stock and corporate bond markets by comparing a firm’s expected stock return, as implied by corporate bond spreads, to its realized stock return. We compute expected corporate bond returns by correcting credit spreads for expected losses due to

Genome-Wide Identification, Characterization, and Expression Analysis of Small RNA Biogenesis Purveyors Reveal Their Role in Regulation of Biotic Stress Responses in Three Legume Crops

Directory of Open Access Journals (Sweden)

Rajeev K. Varshney

2017-04-01

Full Text Available Biotic stress in legume crops is one of the major threats to crop yield and productivity. Being sessile organisms, plants have evolved a myriad of mechanisms to combat different stresses imposed on them. One such mechanism, deciphered in the last decade, is small RNA (sRNA mediated defense in plants. Small RNAs (sRNAs have emerged as one of the major players in gene expression regulation in plants during developmental stages and under stress conditions. They are known to act both at transcriptional and post-transcriptional levels. Dicer-like (DCL, Argonaute (AGO, and RNA dependent RNA polymerase (RDR constitute the major components of sRNA biogenesis machinery and are known to play a significant role in combating biotic and abiotic stresses. This study is, therefore, focused on identification and characterization of sRNA biogenesis proteins in three important legume crops, namely chickpea, pigeonpea, and groundnut. Phylogenetic analysis of these proteins between legume species classified them into distinct clades and suggests the evolutionary conservation of these genes across the members of Papillionidoids subfamily. Variable expression of sRNA biogenesis genes in response to the biotic stresses among the three legumes indicate the possible existence of specialized regulatory mechanisms in different legumes. This is the first ever study to understand the role of sRNA biogenesis genes in response to pathogen attacks in the studied legumes.

Extended space expectation values of position related operators for hydrogen-like quantum system evolutions

International Nuclear Information System (INIS)

Kalay, Berfin; Demiralp, Metin

2014-01-01

The expectation value definitions over an extended space from the considered Hilbert space of the system under consideration is given in another paper of the second author in this symposium. There, in that paper, the conceptuality rather than specification is emphasized on. This work uses that conceptuality to investigate the time evolutions of the position related operators' expectation values not in its standard meaning but rather in a new version of the definition over not the original Hilbert space but in the space obtained by extensions via introducing the images of the given initial wave packet under the positive integer powers of the system Hamiltonian. These images may not be residing in the same space of the initial wave packet when certain singularities appear in the structure of the system Hamiltonian. This may break down the existence of the integrals in the definitions of the expectation values. The cure is the use of basis functions in the abovementioned extended space and the sandwiching of the target operator whose expectation value is under questioning by an appropriately chosen operator guaranteeing the existence of the relevant integrals. Work specifically focuses on the hydrogen-like quantum systems whose Hamiltonians contain a polar singularity at the origin

Integrating nitric oxide into salicylic acid and jasmonic acid/ethylene plant defense pathways

DEFF Research Database (Denmark)

Mur, Luis A J; Prats, Elena; Pierre, Sandra

2013-01-01

to be tailored to particular biotic stresses. Nitric oxide (NO) has emerged as a major signal influencing resistance mediated by both signalling pathways but no attempt has been made to integrate NO into established SA/JA/ET interactions. NO has been shown to act as an inducer or suppressor of signalling along......Plant defence against pests and pathogens is known to be conferred by either salicylic acid (SA) or jasmonic acid (JA)/ethylene (ET) pathways, depending on infection or herbivore-grazing strategy. It is well attested that SA and JA/ET pathways are mutually antagonistic allowing defence responses...

Coupled metal partitioning dynamics and toxicodynamics at biointerfaces: a theory beyond the biotic ligand model framework.

Science.gov (United States)

Duval, Jérôme F L

2016-04-14

A mechanistic understanding of the processes governing metal toxicity to microorganisms (bacteria, algae) calls for an adequate formulation of metal partitioning at biointerfaces during cell exposure. This includes the account of metal transport dynamics from bulk solution to biomembrane and the kinetics of metal internalisation, both potentially controlling the intracellular and surface metal fractions that originate cell growth inhibition. A theoretical rationale is developed here for such coupled toxicodynamics and interfacial metal partitioning dynamics under non-complexing medium conditions with integration of the defining cell electrostatic properties. The formalism explicitly considers intertwined metal adsorption at the biointerface, intracellular metal excretion, cell growth and metal depletion from bulk solution. The theory is derived under relevant steady-state metal transport conditions on the basis of coupled Nernst-Planck equation and continuous logistic equation modified to include metal-induced cell growth inhibition and cell size changes. Computational examples are discussed to identify limitations of the classical Biotic Ligand Model (BLM) in evaluating metal toxicity over time. In particular, BLM is shown to severely underestimate metal toxicity depending on cell exposure time, metal internalisation kinetics, cell surface electrostatics and initial cell density. Analytical expressions are provided for the interfacial metal concentration profiles in the limit where cell-growth is completely inhibited. A rigorous relationship between time-dependent cell density and metal concentrations at the biosurface and in bulk solution is further provided, which unifies previous equations formulated by Best and Duval under constant cell density and cell size conditions. The theory is sufficiently flexible to adapt to toxicity scenarios with involved cell survival-death processes.

Stakeholder Expectations of Service Quality in a University Web Portal

Science.gov (United States)

Tate, Mary; Evermann, Joerg; Hope, Beverley; Barnes, Stuart

Online service quality is a much-studied concept. There is considerable evidence that user expectations and perceptions of self-service and online service quality differ in different business domains. In addition, the nature of online services is continually changing and universities have been at the forefront of this change, with university websites increasingly acting as a portal for a wide range of online transactions for a wide range of stakeholders. In this qualitative study, we conduct focus groups with a range of stakeholders in a university web portal. Our study offers a number of insights into the changing nature of the relationship between organisations and customers. New technologies are influencing customer expectations. Customers increasingly expect organisations to have integrated information systems, and to utilise new technologies such as SMS and web portals. Organisations can be slow to adopt a customer-centric viewpoint, and persist in providing interfaces that are inconsistent or require inside knowledge of organisational structures and processes. This has a negative effect on customer perceptions.

Situating ICT in the Teacher Education Program: Overcoming Challenges, Fulfilling Expectations

Science.gov (United States)

Martinovic, Dragana; Zhang, Zuochen

2012-01-01

This exploratory case study examined pre-service teachers' expectations of and attitudes toward the learning and integrating of ICT into their teaching, and their perceptions of the availability and use of ICT in the Teacher Education Program (TEP) and their placement schools. For two years in a row the researchers collected data through online…

Biotic interactions reduce microbial carbon use efficiency

Science.gov (United States)

Bradford, M.; Maynard, D. S.

2017-12-01

The efficiency by which microbes decompose organic matter governs the amount of carbon that is retained in microbial biomass versus lost to the atmosphere as respiration. This carbon use efficiency (CUE) is affected by various abiotic conditions, such as temperature and nutrient availability. In biogeochemical model simulations, CUE is a key variable regulating how much soil carbon is stored or lost from ecosystems under simulated global changes, such as climate warming. Theoretically, the physiological costs of biotic interactions such as competition should likewise alter CUE, yet the direction and magnitude of these costs are untested. Here we conduct a microcosm experiment to quantify how competitive interactions among saprotrophic fungi alter growth, respiration, and CUE. Free-living decomposer fungi representing a broad range of traits and phylogenies were grown alone, in pairwise competition, and in multi-species (up to 15) communities. By combing culturing and stable carbon isotope approaches, we could resolve the amount of carbon substrate allocated to fungal biomass versus respiration, and so estimate CUE. By then comparing individual performance to community-level outcomes, we show that species interactions induce consistent declines in CUE, regardless of abiotic conditions. Pairwise competition lowers CUE by as much as 25%, with the magnitude of these costs equal to or greater than the observed variation across abiotic conditions. However, depending on the competitive network structure, increasing species richness led to consistent gains or declines in CUE. Our results suggest that the extent to which microbial-mediated carbon fluxes respond to environmental change may be influenced strongly by competitive interactions. As such, knowledge of abiotic conditions and community composition is necessary to confidently project CUE and hence ecosystem carbon dynamics.

ROLE OF ABIOTIC AND BIOTIC FACTORS IN RESEARCH OF VARIETES OF WEIGELA (WEIGELA THUNB., CAPRIFOLIACEAE

Directory of Open Access Journals (Sweden)

A. V. Savenko

2015-01-01

Full Text Available Aim. The success of the introduction of plants depends on their vitality and adaptation to the new conditions of existence. The aim of our study is to identify environmental characteristics of varieties of Weigela to extend the range of ornamental plants under urban ecosystem of Krasnodar. We have analyzed the tolerance of varieties of Weigela to the temperature regime in the introduction region, we explored the complex biotic factors influencing the growth and development of these plants, and also studied the morphological characteristics of pollen and pollen productivity of Weigela flowers.Methods. Evaluation of resistance of varieties of Weigela to a complex of abiotic and biotic factors has been conducted in the field and in the laboratory, taking into account recommendations for ornamental shrubs.Results. Studied Weigela varieties have enough ecological valence to the force of impact of the maximum and minimum air temperatures in the area of the introduction. The most resistant to the complex of summer stress factors are the following varieties of Weigela: 'Candida', 'Nana Variegata', 'Olimpik Flame', 'Red Rrince'. The most heat-resistant varieties are 'Nana Variegata' and 'Olimpik Flame'. The most winter-hardy varieties are 'Candida' and 'Red Rrince', less winter-hardy variety is 'Nana Purpurea'. The most cold-resistant variety is 'Candida'. 'Nana Variegata' produces the highest number of fertile pollen grains. The smallest amount of fertile pollen is formed by 'Nana Purpurea'.Main conclusion. These studies allow us to conclude that all the studied varieties of Weigela are characterized by a high degree of adaptation and deserve widespread use in gardens and parks of the city of Krasnodar.

Revisiting drought impact on tropical forest photosynthesis: a novel multi-scale integrated approach reveals new insights

Science.gov (United States)

Detto, M.; Wu, J.; Xu, X.; Serbin, S.; Rogers, A.

2017-12-01

A fundamental unanswered question for global change ecology is to determine the vulnerability of tropical forests to climate change, particularly with increasing intensity and frequency of drought events. This question, despite its apparent simplicity, remains difficult for earth system models to answer, and is controversial in remote sensing literature. Here, we leverage unique multi-scale remote sensing measurements (from leaf to crown) in conjunction with four-continuous-year (2013-2017) eddy covariance measurements of ecosystem carbon fluxes in a tropical forest in Panama to revisit this question. We hypothesize that drought impacts tropical forest photosynthesis through variation in abiotic drivers (solar radiation, diffuse light fraction, and vapor pressure deficit) that interact with physiological traits that govern photosynthesis, and biotic variation in ecosystem photosynthetic capacity associated with changes in the traits themselves. Our study site, located in a seasonal tropical forest on Barro Colorado Island (BCI), Panama, experienced a significant drought in 2015. Local eddy covariance derived photosynthesis shows an abrupt increase during the drought year. Our specific goal here is to assess the relative impact of abiotic and biotic drivers of such photosynthesis response to interannual drought. To this goal, we derived abiotic drivers from eddy tower-based meteorological measurements. We will derive the biotic drivers using a recently developed leaf demography-ontogeny model, where ecosystem photosynthetic capacity can be described as the product of field measured, age-dependent leaf photosynthetic capacity and local tower-camera derived ecosystem-scale inter-annual variability in leaf age demography of the same time period (2013-2017). Lastly, we will use a process-based model to assess the separate and joint effects of abiotic and biotic drivers on eddy covariance derive photosynthetic interannual variability. Collectively, this novel multi

A web-based system for the integrated water management

Science.gov (United States)

Giordano, R.; Passarella, G.; Uricchio, V. F.; Lopez, N.

2003-04-01

The success of complexity theory has posed new challenges also in the environmental resources management. From the complexity point of view, in fact, the environment has to be considered as a system with numerous parts interrelated each other by strongly and no-linear feedback relationships. In this perspective, when an action is performed its results become difficult to control. Therefore, to construct and to select the most suitable alternatives for environmental resources management, an holistic approach has to be adopted. In water resources management domain, increasing interest is posed to the integrated management, in which the total system of biotic and a-biotic elements of certain water environment is taken into account. Our contribution moves from the idea that the term integrated has to be referred also to human agents which take decisions influencing the water environment. In other words, Integrated Water Management (IWM) considers how different action affect, and can reinforce, each other and it promotes the coordinated development and management of water, land and related resources. The IWM stresses the interrelationships among the actions at different types, working at different levels of influence, coordinating stakeholders' actions. The coordination requires an appropriate information level about the strategies used by each stakeholder. To improve the information flow inside a watershed and therefore the coordination among agents, a web-based system is proposed. It could be defined as an electronic agora where a set of stakeholders can be involved both in information exchange and in conflicts resolution. More in detail, to improve the coordination process, the proposed system allows the stakeholders to find someone with similar or conflicting interests to collaborate with; to make contact with selected people; to build a common understanding (that is the identification of a common goal, the negotiation about the way this goal should be reached); to

Variability in connectivity patterns of fish with ontogenetic migrations: Modelling effects of abiotic and biotic factors

Directory of Open Access Journals (Sweden)

Susanne Eva Tanner

2015-10-01

Full Text Available Connectivity is a critical property of marine fish populations as it drives population replenishment, determines colonization patterns and the resilience of populations to harvest. Understanding connectivity patterns is particularly important in species that present ontogenetic migrations and segregated habitat use during their life history, such as marine species with estuarine nursery areas. Albeit challenging, fish movement can be estimated and quantified using different methodologies depending on the life history stages of interest (e.g. biophysical modelling, otolith chemistry, genetic markers. Relative contributions from estuarine nursery areas to the adult coastal populations were determined using otolith elemental composition and maximum likelihood estimation for four commercially important species (Dicentrarchus labrax, Plathichtys flesus, Solea senegalensis and Solea solea and showed high interannual variability. Here, the effects of abiotic and biotic factors on the observed variability in connectivity rates and extent between estuarine juvenile and coastal adult subpopulations are investigated using generalized linear models (GLM and generalized mixed models (GMM. Abiotic factors impacting both larval and juvenile life history stages are included in the models (e.g. wind force and direction, NAO, water temperature while biotic factors relative to the estuarine residency of juvenile fish are evaluated (e.g. juvenile density, food availability. Factors contributing most to the observed variability in connectivity rates are singled out and compared among species. General trends are identified and results area discussed in the general context of identifying potential management frameworks applicable to different life stages and which may prove useful for ontogenetically migrating species.

Business integration between manufacturing and transport-logistics firms

DEFF Research Database (Denmark)

Mortensen, Ole; Lemoine, Olga W.

electronically through EDI. The current business integration practices are primarily restricted to some sub-processes in three key SC processes: Customer service management, order fulfillment and backwards logistics. In the future the manufacturers want a better integration with the TLSPs, but at the same time......Purpose - This paper analyses how manufacturers and transport-logistics service providers (TLSPs) work together and integrate their business processes. The information technologies used to support the integration, the processes currently integrated, and the expected future integration, are searched......, manufacturers would like to have the freedom of breaking the relationship, if the party does not fulfill the requisites and expectations. The future developments associated to the "commoditization" of TLSPs' services would reinforce this trend. Originality/value - This research has shed light on a relatively...

H2-rich fluids from serpentinization: geochemical and biotic implications.

Science.gov (United States)

Sleep, N H; Meibom, A; Fridriksson, Th; Coleman, R G; Bird, D K

2004-08-31

Metamorphic hydration and oxidation of ultramafic rocks produces serpentinites, composed of serpentine group minerals and varying amounts of brucite, magnetite, and/or FeNi alloys. These minerals buffer metamorphic fluids to extremely reducing conditions that are capable of producing hydrogen gas. Awaruite, FeNi3, forms early in this process when the serpentinite minerals are Fe-rich. Olivine with the current mantle Fe/Mg ratio was oxidized during serpentinization after the Moon-forming impact. This process formed some of the ferric iron in the Earth's mantle. For the rest of Earth's history, serpentinites covered only a small fraction of the Earth's surface but were an important prebiotic and biotic environment. Extant methanogens react H2 with CO2 to form methane. This is a likely habitable environment on large silicate planets. The catalytic properties of FeNi3 allow complex organic compounds to form within serpentinite and, when mixed with atmospherically produced complex organic matter and waters that circulated through basalts, constitutes an attractive prebiotic substrate. Conversely, inorganic catalysis of methane by FeNi3 competes with nascent and extant life. Copyright 2004 The National Academy of Sciencs of the USA

Treatment non-response: Associations with smoking expectancies among treatment-seeking smokers.

Science.gov (United States)

Garey, Lorra; Taha, Samar A; Kauffman, Brooke Y; Manning, Kara F; Neighbors, Clayton; Schmidt, Norman B; Zvolensky, Michael J

2017-10-01

Despite the high rate of smoking cessation treatment non-response, relatively little empirical work has examined predictors of treatment non-response. The present study sought to explore the effect of smoking outcome expectancies on treatment response in a sample of treatment-seeking adult daily smokers (N=182; 53.3% female; M age =40.67; SD=13.63). Results indicated that expectancies for smoking to reduce negative affect were related to an increased likelihood of treatment non-response (OR=0.73, CI: 0.54, 0.98). These findings remained significant after controlling for sex, presence of Axis I disorder, tobacco-related health problems, tobacco dependence, anxiety sensitivity, and condition assignment as well as other smoking expectancy dimensions. Post hoc analyses revealed that this relation was stronger for smokers in the integrated care condition vs. the standard care condition (Interaction: OR=1.69, CI: 1.05, 2.73). Additionally, expectancies for smoking to enhance positive affect and provide sensory satisfaction were associated with an increased likelihood of treatment response in the standard care condition. The current findings suggest expectancies that smoking will alleviate negative affect may be a risk factor of smoking cessation treatment non-response. Additionally, findings provide evidence that the relation between smoking expectancies and treatment non-response may differ by smoking cessation treatment. Copyright © 2017 Elsevier Ltd. All rights reserved.

Measured Copper Toxicity to Cnesterodon decemmaculatus (Pisces: Poeciliidae and Predicted by Biotic Ligand Model in Pilcomayo River Water: A Step for a Cross-Fish-Species Extrapolation

Directory of Open Access Journals (Sweden)

María Victoria Casares

2012-01-01

Full Text Available In order to determine copper toxicity (LC50 to a local species (Cnesterodon decemmaculatus in the South American Pilcomayo River water and evaluate a cross-fish-species extrapolation of Biotic Ligand Model, a 96 h acute copper toxicity test was performed. The dissolved copper concentrations tested were 0.05, 0.19, 0.39, 0.61, 0.73, 1.01, and 1.42 mg Cu L-1. The 96 h Cu LC50 calculated was 0.655 mg L-1 (0.823-0.488. 96-h Cu LC50 predicted by BLM for Pimephales promelas was 0.722 mg L-1. Analysis of the inter-seasonal variation of the main water quality parameters indicates that a higher protective effect of calcium, magnesium, sodium, sulphate, and chloride is expected during the dry season. The very high load of total suspended solids in this river might be a key factor in determining copper distribution between solid and solution phases. A cross-fish-species extrapolation of copper BLM is valid within the water quality parameters and experimental conditions of this toxicity test.

Alternative Oxidase: A Mitochondrial Respiratory Pathway to Maintain Metabolic and Signaling Homeostasis during Abiotic and Biotic Stress in Plants

Directory of Open Access Journals (Sweden)

Greg C. Vanlerberghe

2013-03-01

Full Text Available Alternative oxidase (AOX is a non-energy conserving terminal oxidase in the plant mitochondrial electron transport chain. While respiratory carbon oxidation pathways, electron transport, and ATP turnover are tightly coupled processes, AOX provides a means to relax this coupling, thus providing a degree of metabolic homeostasis to carbon and energy metabolism. Beside their role in primary metabolism, plant mitochondria also act as “signaling organelles”, able to influence processes such as nuclear gene expression. AOX activity can control the level of potential mitochondrial signaling molecules such as superoxide, nitric oxide and important redox couples. In this way, AOX also provides a degree of signaling homeostasis to the organelle. Evidence suggests that AOX function in metabolic and signaling homeostasis is particularly important during stress. These include abiotic stresses such as low temperature, drought, and nutrient deficiency, as well as biotic stresses such as bacterial infection. This review provides an introduction to the genetic and biochemical control of AOX respiration, as well as providing generalized examples of how AOX activity can provide metabolic and signaling homeostasis. This review also examines abiotic and biotic stresses in which AOX respiration has been critically evaluated, and considers the overall role of AOX in growth and stress tolerance.

Path integration quantization

International Nuclear Information System (INIS)

DeWitt-Morette, C.

1983-01-01

Much is expected of path integration as a quantization procedure. Much more is possible if one recognizes that path integration is at the crossroad of stochastic and differential calculus and uses the full power of both stochastic and differential calculus in setting up and computing path integrals. In contrast to differential calculus, stochastic calculus has only comparatively recently become an instrument of thought. It has nevertheless already been used in a variety of challenging problems, for instance in the quantization problem. The author presents some applications of the stochastic scheme. (Auth.)

Release from native root herbivores and biotic resistance by soil pathogens in a new habitat both affect the alien Ammophila arenaria in South Africa

NARCIS (Netherlands)

Knevel, IC; Lans, T; Menting, FBJ; Hertling, UM; van der Putten, WH

2004-01-01

Many native communities contain exotic plants that pose a major threat to indigenous vegetation and ecosystem functioning. Therefore the enemy release hypothesis (ERH) and biotic resistance hypothesis (BRH) were examined in relation to the invasiveness of the introduced dune grass Ammophila arenaria

Legal, Physical and Biotic Characterization of Açu Lagoon State Park

Directory of Open Access Journals (Sweden)

Maxoel Barros Costa

2017-10-01

Full Text Available Since its initial human occupation, the Atlantic Forest suffers from impacts. The damage worsened with the subsequent colonization and exploitation of the area for economic and industrial purposes. In the state of Rio de Janeiro, the sandbank is the most threatened of all ecosystems that make up this biome due to its location in the coastal areas. Currently, there is less than 10% of its original area. The North Fluminense region has large remnants of sandbank. For years, the possibility of creating an Environmental Protection Area that would encompass this area was considered. The Decree 43.522/2012 establishes the creation of Açu Lagoon State Park, which encompasses the Boa Vista Marsh, the Açu Lagoon and part of the Salgada Lagoon within its boundaries, an area with a range of conserved sandbank vegetation, ponds, lagoons, streams that are of great environmental importance to the region. This review aims to make a general analysis from the data collected about the different physical and biotic features of this park, besides the legal parameters that govern it.

Senior executives' perspectives of integrated reporting regulatory ...

African Journals Online (AJOL)

kirstam

2014-12-09

Dec 9, 2014 ... that integrated thinking and integrated reporting principles will have ... in response to financial, governance and other crises; heightened expectations of ... The Prince's Accounting for Sustainability Project suggests a concept.

Support media can steer methanogenesis in the presence of phenol through biotic and abiotic effects.

Science.gov (United States)

Poirier, Simon; Déjean, Sébastien; Chapleur, Olivier

2018-09-01

A wide variety of inhibitors can induce anaerobic digester disruption. To avoid performance losses, support media can be used to mitigate inhibitions. However, distinguishing the physico-chemical from the biological mechanisms of such strategies remains delicate. In this framework, the impact of 10  g/L of different types of zeolites and activated carbons (AC) on microbial community dynamics during anaerobic digestion of biowaste in the presence of 1.3 g/L of phenol was evaluated with 16 S rRNA gene sequencing. In the presence of AC, methanogenesis inhibition was rapidly removed due to a decrease of phenol concentration. This abiotic effect related to the physico-chemical properties of AC led to increased final CH4 and CO2 productions by 29-31% compared to digesters incubated without support. Interestingly, although zeolite did not adsorb phenol, final CH4 and CO2 production reached comparable levels as with AC. Nevertheless, compared to digesters incubated without support, methanogenesis lag phase duration was less reduced in the presence of zeolites (5 ± 1 days) than in the presence of activated carbons (12 ± 2 days). Both types of support induced biotic effects. AC and zeolite both allowed the preservation of the major representative archaeal genus of the non-inhibited ecosystem, Methanosarcina. By contrast, they distinctly shaped bacterial populations. OTUs belonging to class W5 became dominant at the expense of OTUs assigned to orders Clostridiales, Bacteroidales and Anaerolinales in the presence of AC. Zeolite enhanced the implantation of OTUs assigned to bacterial phylum Cloacimonetes. This study highlighted that supports can induce biotic and abiotic effects within digesters inhibited with phenol, showing potentialities to enhance anaerobic digestion stability under disrupting conditions. Copyright © 2018 Elsevier Ltd. All rights reserved.

Abiotic and biotic transformations of 1,1,1-trichloroethane under methanogenic conditions

International Nuclear Information System (INIS)

Vogel, T.M.; McCarty, P.L.

1987-01-01

A common industrial solvent, 1,1,1-trichloroethane (TCA), is one of the most frequently found contaminants in ground water. The fate of TCA in ground water is complicated by the different possible abiotic and biotic transformations that it may undergo. Abiotic transformation of TCA can result in a mixture of 1,1-dichloro-ethylene (1,1-DCE) and acetic acid, as shown by others. This study confirms that TCA can be biotransformed by reductive dehalogenation to 1,1-dichloroethane (1,1-DCA) and chloroethane (CA) under methanogenic conditions. Also, reductive dehalogenation of 1,1-DCE to vinyl chloride (VC) is confirmed. This study demonstrates that these transformations can occur stoichiometrically. In addition, [ 14 C]TCA, [ 14 C]-1,1-DCA, [ 14 C]-1,1-DCE, [ 14 C]CA, and [ 14 C]VC were at least partially mineralized to 14 CO 2 under similar methanogenic conditions.23 references, 3 figures, 4 tables

Patient Awareness and Expectations of Pharmacist Services During Hospital Stay.

Science.gov (United States)

King, Philip K; Martin, Steven J; Betka, Eric M

2017-10-01

There are insufficient data in the United States regarding patient awareness and expectations of hospital pharmacist availability and services. The objective of this research is to assess patient awareness and expectations of hospital pharmacist services and to determine whether a marketing campaign for pharmacist services increases patient awareness and expectations. Eligible inpatients were surveyed before and after implementation of a hospital-wide pharmacist services marketing campaign (12 items; Likert scale of 1 [strongly disagree] to 4 [strongly agree]; maximum total score of 48) regarding awareness of pharmacist services. The primary outcome was the change in median total survey scores from baseline. Other outcomes included the frequency of patient requests for pharmacists. Similar numbers of patients completed the survey before and after the campaign (intervention, n = 140, vs control, n = 147). Awareness of pharmacist availability and services was increased (41 [interquartile ranges, IQRs: 36-46] vs 37 [IQR 31-43]; P marketing campaign implementation. Awareness among inpatients of pharmacist services is low. Marketing pharmacist availability and services to patients in the hospital improves awareness and expectations for pharmacist-provided care and increases the frequency of patient-initiated interaction between pharmacists and patients. This could improve patient outcomes as pharmacists become more integrally involved in direct patient care.

Best Practice Life Expectancy

DEFF Research Database (Denmark)

Medford, Anthony

2017-01-01

been reported previously by various authors. Though remarkable, this is simply an empirical observation. Objective: We examine best-practice life expectancy more formally by using extreme value theory. Methods: Extreme value distributions are fit to the time series (1900 to 2012) of maximum life......Background: Whereas the rise in human life expectancy has been extensively studied, the evolution of maximum life expectancies, i.e., the rise in best-practice life expectancy in a group of populations, has not been examined to the same extent. The linear rise in best-practice life expectancy has...... expectancies at birth and age 65, for both sexes, using data from the Human Mortality Database and the United Nations. Conclusions: Generalized extreme value distributions offer a theoretically justified way to model best-practice life expectancies. Using this framework one can straightforwardly obtain...

Maternal Expectations for Toddlers' Reactions to Novelty: Relations of Maternal Internalizing Symptoms and Parenting Dimensions to Expectations and Accuracy of Expectations.

Science.gov (United States)

Kiel, Elizabeth J; Buss, Kristin A

2010-07-03

OBJECTIVE: Although maternal internalizing symptoms and parenting dimensions have been linked to reports and perceptions of children's behavior, it remains relatively unknown whether these characteristics relate to expectations or the accuracy of expectations for toddlers' responses to novel situations. DESIGN: A community sample of 117 mother-toddler dyads participated in a laboratory visit and questionnaire completion. At the laboratory, mothers were interviewed about their expectations for their toddlers' behaviors in a variety of novel tasks; toddlers then participated in these activities, and trained coders scored their behaviors. Mothers completed questionnaires assessing demographics, depressive and worry symptoms, and parenting dimensions. RESULTS: Mothers who reported more worry expected their toddlers to display more fearful behavior during the laboratory tasks, but worry did not moderate how accurately maternal expectations predicted toddlers' observed behavior. When also reporting a low level of authoritative-responsive parenting, maternal depressive symptoms moderated the association between maternal expectations and observed toddler behavior, such that, as depressive symptoms increased, maternal expectations related less strongly to toddler behavior. CONCLUSIONS: When mothers were asked about their expectations for their toddlers' behavior in the same novel situations from which experimenters observe this behavior, symptoms and parenting had minimal effect on the accuracy of mothers' expectations. When in the context of low authoritative-responsive parenting, however, depressive symptoms related to less accurate predictions of their toddlers' fearful behavior.

Maternal Expectations for Toddlers’ Reactions to Novelty: Relations of Maternal Internalizing Symptoms and Parenting Dimensions to Expectations and Accuracy of Expectations

Science.gov (United States)

Kiel, Elizabeth J.; Buss, Kristin A.

2010-01-01

SYNOPSIS Objective Although maternal internalizing symptoms and parenting dimensions have been linked to reports and perceptions of children’s behavior, it remains relatively unknown whether these characteristics relate to expectations or the accuracy of expectations for toddlers’ responses to novel situations. Design A community sample of 117 mother-toddler dyads participated in a laboratory visit and questionnaire completion. At the laboratory, mothers were interviewed about their expectations for their toddlers’ behaviors in a variety of novel tasks; toddlers then participated in these activities, and trained coders scored their behaviors. Mothers completed questionnaires assessing demographics, depressive and worry symptoms, and parenting dimensions. Results Mothers who reported more worry expected their toddlers to display more fearful behavior during the laboratory tasks, but worry did not moderate how accurately maternal expectations predicted toddlers’ observed behavior. When also reporting a low level of authoritative-responsive parenting, maternal depressive symptoms moderated the association between maternal expectations and observed toddler behavior, such that, as depressive symptoms increased, maternal expectations related less strongly to toddler behavior. Conclusions When mothers were asked about their expectations for their toddlers’ behavior in the same novel situations from which experimenters observe this behavior, symptoms and parenting had minimal effect on the accuracy of mothers’ expectations. When in the context of low authoritative-responsive parenting, however, depressive symptoms related to less accurate predictions of their toddlers’ fearful behavior. PMID:21037974

Regulatory Expectations for Safety Culture

Energy Technology Data Exchange (ETDEWEB)

Jung, Su Jin; Oh, Jang Jin; Choi, Young Sung [Korea Institute of Nuclear Safety, Daejeon (Korea, Republic of)

2014-05-15

The oversight of licensee's safety culture becomes an important issue that attracts great public and political concerns recently in Korea. Beginning from the intended violation of rules, a series of corruptions, documents forgery and disclosure of wrong-doings made the public think that the whole mindset of nuclear workers has been inadequate. Thus, they are demanding that safety culture shall be improved and that regulatory body shall play more roles and responsibilities for the improvements and oversight for them. This paper introduces, as an effort of regulatory side, recent changes in the role of regulators in safety culture, regulatory expectations on the desired status of licensee's safety culture, the pilot inspection program for safety culture and research activity for the development of oversight system. After the Fukushima accident in Japan 2011, many critics has searched for cultural factors that caused the unacceptable negligence pervaded in Japan nuclear society and the renewed emphasis has been placed on rebuilding safety culture by operators, regulators, and relevant institutions globally. Significant progress has been made in how to approach safety culture and led to a new perspective different from the existing normative assessment method both in operators and regulatory side. Regulatory expectations and oversight of them are based on such a new holistic concept for human, organizational and cultural elements to maintain and strengthen the integrity of defense in depth and consequently nuclear safety.

Regulatory Expectations for Safety Culture

International Nuclear Information System (INIS)

Jung, Su Jin; Oh, Jang Jin; Choi, Young Sung

2014-01-01

The oversight of licensee's safety culture becomes an important issue that attracts great public and political concerns recently in Korea. Beginning from the intended violation of rules, a series of corruptions, documents forgery and disclosure of wrong-doings made the public think that the whole mindset of nuclear workers has been inadequate. Thus, they are demanding that safety culture shall be improved and that regulatory body shall play more roles and responsibilities for the improvements and oversight for them. This paper introduces, as an effort of regulatory side, recent changes in the role of regulators in safety culture, regulatory expectations on the desired status of licensee's safety culture, the pilot inspection program for safety culture and research activity for the development of oversight system. After the Fukushima accident in Japan 2011, many critics has searched for cultural factors that caused the unacceptable negligence pervaded in Japan nuclear society and the renewed emphasis has been placed on rebuilding safety culture by operators, regulators, and relevant institutions globally. Significant progress has been made in how to approach safety culture and led to a new perspective different from the existing normative assessment method both in operators and regulatory side. Regulatory expectations and oversight of them are based on such a new holistic concept for human, organizational and cultural elements to maintain and strengthen the integrity of defense in depth and consequently nuclear safety

Do taste expectations mediate the impact of quality cues on consumers’ choice of chicken?

DEFF Research Database (Denmark)

Marian, Livia; Thøgersen, John; Krystallis Krontalis, Athanasios

. The conjoint design was a metric traditional conjoint approach based on an additive model, where 405 respondents had to rate their willingness to buy and expectations regarding taste of each one of the nine different chickens on scales from 0 to 10. It was thus possible to conduct two different conjoint...... analyses, in order to determine the impact of the quality cues on buying intention on the one hand, and on the expected taste on the other hand. In these models, quality cues are initial variables, while expected taste and willingness to buy are both outcome variables. The two models are then integrated...... when testing whether or not expected taste mediates the effects of quality cues on willingness to buy. Hence, in the mediational model, quality cues are initial variables, willingness to buy is the outcome and expected taste is the mediator. The most effective way to do the mediation analysis is still...

Linking Spatial Structure and Community-Level Biotic Interactions through Cooccurrence and Time Series Modeling of the Human Intestinal Microbiota.

Science.gov (United States)

de Muinck, Eric J; Lundin, Knut E A; Trosvik, Pål

2017-01-01

The gastrointestinal (GI) microbiome is a densely populated ecosystem where dynamics are determined by interactions between microbial community members, as well as host factors. The spatial organization of this system is thought to be important in human health, yet this aspect of our resident microbiome is still poorly understood. In this study, we report significant spatial structure of the GI microbiota, and we identify general categories of spatial patterning in the distribution of microbial taxa along a healthy human GI tract. We further estimate the biotic interaction structure in the GI microbiota, both through time series and cooccurrence modeling of microbial community data derived from a large number of sequentially collected fecal samples. Comparison of these two approaches showed that species pairs involved in significant negative interactions had strong positive contemporaneous correlations and vice versa, while for species pairs without significant interactions, contemporaneous correlations were distributed around zero. We observed similar patterns when comparing these models to the spatial correlations between taxa identified in the adherent microbiota. This suggests that colocalization of microbial taxon pairs, and thus the spatial organization of the GI microbiota, is driven, at least in part, by direct or indirect biotic interactions. Thus, our study can provide a basis for an ecological interpretation of the biogeography of the human gut. IMPORTANCE The human gut microbiome is the subject of intense study due to its importance in health and disease. The majority of these studies have been based on the analysis of feces. However, little is known about how the microbial composition in fecal samples relates to the spatial distribution of microbial taxa along the gastrointestinal tract. By characterizing the microbial content both in intestinal tissue samples and in fecal samples obtained daily, we provide a conceptual framework for how the spatial

Childbirth expectations and correlates at the final stage of pregnancy in Chinese expectant parents

Directory of Open Access Journals (Sweden)

Xian Zhang

2014-06-01

Conclusion: This study adds to understanding of the childbirth expectations of Chinese expectant parents. It is suggested that maternity healthcare providers pay close attention to the childbirth expectations of expectant parents, and improve the nursing care service to promote positive childbirth experiences and satisfaction of expectant parents.

African Journal of Aquatic Science - Vol 29, No 2 (2004)

African Journals Online (AJOL)

Development and application of a fish-based Sensitivity-weighted Index of Biotic Integrity (SIBI) for use in the assessment of biotic integrity in the Klip River, Gauteng, South Africa · EMAIL FULL TEXT EMAIL FULL TEXT · DOWNLOAD FULL TEXT DOWNLOAD FULL TEXT. P J Kotze, G J Steyn, H H du Preez, C J Kleynhans ...

IMA status seminar 'biotic damaging factors/epidemiology'. Summaries. IMA-Statusseminar 'Biotische Schadfaktoren/Epidemiologie'. Kurzberichte

Energy Technology Data Exchange (ETDEWEB)

Stuettgen, E. (ed.)

1986-07-01

This workshop is concerned primarily with the effects of biotic factors on forest decline. The possible involvement of viruses, mycoplasma-like organisms (MLO), rickettsia-like bacteria (RLB), fungi, insects and nematodes in diseases and pests of forest trees has to be investigated. Beside abiotic factors these agents are the cause of different die-back symptoms and damage of trees, but it is not yet known to what extent they contribute to the symptoms man associate with the forest decline ''Waldsterben''.

Assessing vocational outcome expectancy in individuals with serious mental illness: a factor-analytic approach.

Science.gov (United States)

Iwanaga, Kanako; Umucu, Emre; Wu, Jia-Rung; Yaghmaian, Rana; Lee, Hui-Ling; Fitzgerald, Sandra; Chan, Fong

2017-07-04

Self-determination theory (SDT) and self-efficacy theory (SET) can be used to conceptualize self-determined motivation to engage in mental health and vocational rehabilitation (VR) services and to predict recovery. To incorporate SDT and SET as a framework for vocational recovery, developing and validating SDT/SET measures in vocational rehabilitation is warranted. Outcome expectancy is an important SDT/SET variable affecting rehabilitation engagement and recovery. The purpose of this study was to validate the Vocational Outcome Expectancy Scale (VOES) for use within the SDT/SET vocational recovery framework. One hundred and twenty-four individuals with serious mental illness (SMI) participated in this study. Measurement structure of the VOES was evaluated using exploratory factor analysis (EFA) and confirmatory factor analysis (CFA). Both EFA and CFA results supported a two-factor structure: (a) positive outcome expectancy, and (b) negative outcome expectancy. The internal consistency reliability coefficients for both factors were acceptable. In addition, positive outcome expectancy correlated stronger than negative outcome expectancy with other SDT/SET constructs in the expected directions. The VOES is a brief, reliable and valid instrument for assessing vocational outcome expectancy in individuals with SMI that can be integrated into SDT/SET as a vocational rehabilitation engagement and recovery model in psychiatric rehabilitation.

Principles of Chemical Biology: From Sexy Fatty Acids and EBV probes to Anti-Acid Antibiotic via Post-Biotics and Host-Microbe Metabolic Complementarity.

Science.gov (United States)

2017-06-22

This month: The role of fatty acids in sex determination; a probe to monitor and inhibit EBNA1 at the same time; a biological role for post-biotics; what happens when you mix microbes, hosts, and drugs; and an antibiotic that cross-protects with acid. Copyright © 2017. Published by Elsevier Ltd.

Integrated microchannel cooling in a three dimensional integrated circuit: A thermal management

Directory of Open Access Journals (Sweden)

Wang Kang-Jia

2016-01-01

Full Text Available Microchannel cooling is a promising technology for solving the three-dimensional integrated circuit thermal problems. However, the relationship between the microchannel cooling parameters and thermal behavior of the three dimensional integrated circuit is complex and difficult to understand. In this paper, we perform a detailed evaluation of the influence of the microchannel structure and the parameters of the cooling liquid on steady-state temperature profiles. The results presented in this paper are expected to aid in the development of thermal design guidelines for three dimensional integrated circuit with microchannel cooling.

The community diversity of two Caribbean MPAs invaded by lionfish does not support the biotic resistance hypothesis

Science.gov (United States)

Cobián-Rojas, Dorka; Schmitter-Soto, Juan J.; Aguilar Betancourt, Consuelo M.; Aguilar-Perera, Alfonso; Ruiz-Zárate, Miguel Á.; González-Sansón, Gaspar; Chevalier Monteagudo, Pedro P.; Herrera Pavón, Roberto; García Rodríguez, Alain; Corrada Wong, Raúl I.; Cabrera Guerra, Delmis; Salvat Torres, Héctor; Perera Valderrama, Susana

2018-04-01

Marine protected areas (MPAs) conserve diversity and abundance of fish communities. According to the biotic resistance hypothesis, communities with higher diversity and abundance should resist invasions better. To test this idea, the presence of lionfish in two Caribbean MPAs was studied: Parque Nacional Guanahacabibes (PNG) in Cuba and Parque Nacional Arrecifes de Xcalak (PNAX) in Mexico. Selection of these MPAs was based on both their different levels of success with enforcement and different abundances of native fish, with a more abundant native fish fauna at PNG. Underwater visual censuses were used to evaluate both the native fish structure and composition and at the same time distribution and abundance of lionfish. The abundance of potential predators on lionfish was also measured to determine possible effects of lionfish on both the abundance and the size of its prey and competitors. Lionfish showed higher abundance and larger size in PNG compared to PNAX, even though its probable competitors and predators were also more abundant and larger in PNG. Prey abundance and size decreased after the invasion. No correlation was detected between potential predators and lionfish, which might indicate natural predation is not substantial. In PNAX, lower abundance of prey, potential competitors and predators can also be attributed to historical overfishing, but this did not provide an advantage to lionfish. Lionfish were less abundant and reached smaller sizes in PNAX compared to PNG. This work confirms the effectiveness of lionfish culling at PNAX, but does not support the biotic resistence hypothesis that native fish might have controlled this invasive species.

Entrepreneurial Integration Skills

DEFF Research Database (Denmark)

Bauer, Florian; Schriber, Svante; King, David R.

2016-01-01

on 116 acquisitions, we find that entrepreneurial integration skills can display both advantages and disadvantages. While it helps to realize expected and serendipitous synergies, it can also trigger employee uncertainty due to decreased transparency. In supplementary analysis, we show measures...

NON-EXPECTED UTILITY THEORIES: WEIGHTED EXPECTED, RANK DEPENDENT, AND CUMULATIVE PROSPECT THEORY UTILITY

OpenAIRE

Tuthill, Jonathan W.; Frechette, Darren L.

2002-01-01

This paper discusses some of the failings of expected utility including the Allais paradox and expected utility's inadequate one dimensional characterization of risk. Three alternatives to expected utility are discussed at length; weighted expected utility, rank dependent utility, and cumulative prospect theory. Each alternative is capable of explaining Allais paradox type problems and permits more sophisticated multi dimensional risk preferences.

Effect of biotic lignin decomposition on the fate of radiocesium-contaminated plant litter

Energy Technology Data Exchange (ETDEWEB)

Hashida, Shin-nosuke; Yoshihara, Toshihiro [Environmental Science Research Laboratory, Central Research Institute of Electric Power Industry, Abiko 1646, Abiko-shi, Chiba (Japan)

2014-07-01

Fungi are the most important components in the fate of radionuclides deposited in forests following the Fukushima nuclear accident. Pruned woody parts and litter contain a considerable amount of radiocesium. Studies that focused on the migration of radiocesium have demonstrated that its ecological half-life is lower in the humus layer than in the deeper soil zone, suggesting a substantial contribution of litter decomposition on the mobilization of radiocesium. Furthermore, white-rot fungi appear to play a key role in the mobilization of radiocesium because they are the primary source of enzymes necessary to degrade the litter organic matter. Cell walls are the primary component of plant litter; they are composed of cellulose, hemi-cellulose, and lignin. Although cellulose is the most abundant organic compound in litter, the strength of the cell wall is limited by rigid hemi-cellulose complexes that protect the surrounding cellulose microfibrils. In the cell wall, lignin fills the spaces between cellulose and hemi-cellulose; thus, the biotic degradation of lignin could be considered a primary step in litter decomposition. The contribution of the amount of lignin on the fate of radiocesium has not been identified, which limits the possibility of predicting the effect of the bacterial community structure that determines the biodegradation activity of lignin on the vertical migration of radiocesium. Here, we directly addressed the role of lignin as controller of the distribution of radiocesium in soil-ecosystems. Radiocesium-contaminated litter samples were collected with traps set under the target stands, i.e., Japanese flowering cherry trees (Prunus x yedoensis cv. Somei-Yoshino) and Japanese cedars (Cryptomeria japonica) at Abiko (Laboratory of Environmental Science, CRIEPI) located approximately 200 km SSW from the Fukushima Daiichi Nuclear Power Plant in 2011. The litter samples were inoculated with white-rot fungi having ligno-celluloses-degrading activity, i

Idrott som integration

OpenAIRE

Karlefors, Inger; Hertting, Krister

2010-01-01

Competitive sport is a global phenomenon with a common language, but at the same time locally embedded in the national culture. The global character gives competitive sport an attraction, which can create an important arena for integration when people arrive to a new country. Problems can rise when diverse expectations and images meet. To create understanding and facilitate integration for children and youth from different countries it is important to understand which images of sport that is ...

Combined effects of expectations and visual uncertainty upon detection and identification of a target in the fog.

Science.gov (United States)

Quétard, Boris; Quinton, Jean-Charles; Colomb, Michèle; Pezzulo, Giovanni; Barca, Laura; Izaute, Marie; Appadoo, Owen Kevin; Mermillod, Martial

2015-09-01

Detecting a pedestrian while driving in the fog is one situation where the prior expectation about the target presence is integrated with the noisy visual input. We focus on how these sources of information influence the oculomotor behavior and are integrated within an underlying decision-making process. The participants had to judge whether high-/low-density fog scenes displayed on a computer screen contained a pedestrian or a deer by executing a mouse movement toward the response button (mouse-tracking). A variable road sign was added on the scene to manipulate expectations about target identity. We then analyzed the timing and amplitude of the deviation of mouse trajectories toward the incorrect response and, using an eye tracker, the detection time (before fixating the target) and the identification time (fixations on the target). Results revealed that expectation of the correct target results in earlier decisions with less deviation toward the alternative response, this effect being partially explained by the facilitation of target identification.

Integrated care: theory to practice.

Science.gov (United States)

Stokes, Jonathan; Checkland, Kath; Kristensen, Søren Rud

2016-10-01

'Integrated care' is pitched as the solution to current health system challenges. In the literature, what integrated care actually involves is complex and contested. Multi-disciplinary team case management is frequently the primary focus of integrated care when implemented internationally. We examine the practical application of integrated care in the NHS in England to exemplify the prevalence of the case management focus. We look at the evidence for effectiveness of multi-disciplinary team case management, for the focus on high-risk groups and for integrated care more generally. We suggest realistic expectations of what integration of care alone can achieve and additional research questions. © The Author(s) 2016.

Injury Profile SIMulator, a qualitative aggregative modelling framework to predict crop injury profile as a function of cropping practices, and the abiotic and biotic environment. I. Conceptual bases.

Directory of Open Access Journals (Sweden)

Jean-Noël Aubertot

Full Text Available The limitation of damage caused by pests (plant pathogens, weeds, and animal pests in any agricultural crop requires integrated management strategies. Although significant efforts have been made to i develop, and to a lesser extent ii combine genetic, biological, cultural, physical and chemical control methods in Integrated Pest Management (IPM strategies (vertical integration, there is a need for tools to help manage Injury Profiles (horizontal integration. Farmers design cropping systems according to their goals, knowledge, cognition and perception of socio-economic and technological drivers as well as their physical, biological, and chemical environment. In return, a given cropping system, in a given production situation will exhibit a unique injury profile, defined as a dynamic vector of the main injuries affecting the crop. This simple description of agroecosystems has been used to develop IPSIM (Injury Profile SIMulator, a modelling framework to predict injury profiles as a function of cropping practices, abiotic and biotic environment. Due to the tremendous complexity of agroecosystems, a simple holistic aggregative approach was chosen instead of attempting to couple detailed models. This paper describes the conceptual bases of IPSIM, an aggregative hierarchical framework and a method to help specify IPSIM for a given crop. A companion paper presents a proof of concept of the proposed approach for a single disease of a major crop (eyespot on wheat. In the future, IPSIM could be used as a tool to help design ex-ante IPM strategies at the field scale if coupled with a damage sub-model, and a multicriteria sub-model that assesses the social, environmental, and economic performances of simulated agroecosystems. In addition, IPSIM could also be used to help make diagnoses on commercial fields. It is important to point out that the presented concepts are not crop- or pest-specific and that IPSIM can be used on any crop.

Injury Profile SIMulator, a qualitative aggregative modelling framework to predict crop injury profile as a function of cropping practices, and the abiotic and biotic environment. I. Conceptual bases.

Science.gov (United States)

Aubertot, Jean-Noël; Robin, Marie-Hélène

2013-01-01

The limitation of damage caused by pests (plant pathogens, weeds, and animal pests) in any agricultural crop requires integrated management strategies. Although significant efforts have been made to i) develop, and to a lesser extent ii) combine genetic, biological, cultural, physical and chemical control methods in Integrated Pest Management (IPM) strategies (vertical integration), there is a need for tools to help manage Injury Profiles (horizontal integration). Farmers design cropping systems according to their goals, knowledge, cognition and perception of socio-economic and technological drivers as well as their physical, biological, and chemical environment. In return, a given cropping system, in a given production situation will exhibit a unique injury profile, defined as a dynamic vector of the main injuries affecting the crop. This simple description of agroecosystems has been used to develop IPSIM (Injury Profile SIMulator), a modelling framework to predict injury profiles as a function of cropping practices, abiotic and biotic environment. Due to the tremendous complexity of agroecosystems, a simple holistic aggregative approach was chosen instead of attempting to couple detailed models. This paper describes the conceptual bases of IPSIM, an aggregative hierarchical framework and a method to help specify IPSIM for a given crop. A companion paper presents a proof of concept of the proposed approach for a single disease of a major crop (eyespot on wheat). In the future, IPSIM could be used as a tool to help design ex-ante IPM strategies at the field scale if coupled with a damage sub-model, and a multicriteria sub-model that assesses the social, environmental, and economic performances of simulated agroecosystems. In addition, IPSIM could also be used to help make diagnoses on commercial fields. It is important to point out that the presented concepts are not crop- or pest-specific and that IPSIM can be used on any crop.

Radical Islamism and Migrant Integration in Denmark

DEFF Research Database (Denmark)

Goli, Marco; Rezaei, Shahamak

2011-01-01

It has been suggested that alienation and failed integration may be causes of “Homegrown Radical Islamism” in Western societies. Western countries often expect that migrants and their descendants residing there as citizens will embrace or support common democratic ideals as a predicate for – or c......It has been suggested that alienation and failed integration may be causes of “Homegrown Radical Islamism” in Western societies. Western countries often expect that migrants and their descendants residing there as citizens will embrace or support common democratic ideals as a predicate...

Predicting who will major in a science discipline: Expectancy-value theory as part of an ecological model for studying academic communities

Science.gov (United States)

Sullins, Ellen S.; Hernandez, Delia; Fuller, Carol; Shiro Tashiro, Jay

Research on factors that shape recruitment and retention in undergraduate science majors currently is highly fragmented and in need of an integrative research framework. Such a framework should incorporate analyses of the various levels of organization that characterize academic communities (i.e., the broad institutional level, the departmental level, and the student level), and should also provide ways to study the interactions occurring within and between these structural levels. We propose that academic communities are analogous to ecosystems, and that the research paradigms of modern community ecology can provide the necessary framework, as well as new and innovative approaches to a very complex area. This article also presents the results of a pilot study that demonstrates the promise of this approach at the student level. We administered a questionnaire based on expectancy-value theory to undergraduates enrolled in introductory biology courses. Itself an integrative approach, expectancy-value theory views achievement-related behavior as a joint function of the person's expectancy of success in the behavior and the subjective value placed on such success. Our results indicated: (a) significant gender differences in the underlying factor structures of expectations and values related to the discipline of biology, (b) expectancy-value factors significantly distinguished biology majors from nonmajors, and (c) expectancy-value factors significantly predicted students' intent to enroll in future biology courses. We explore the expectancy-value framework as an operationally integrative framework in our ecological model for studying academic communities, especially in the context of assessing the underrepresentation of women and minorities in the sciences. Future research directions as well as practical implications are also discussed.

Bayou Choctaw Well Integrity Grading Component Based on Geomechanical Simulation

Energy Technology Data Exchange (ETDEWEB)

Park, Byoung [Sandia National Lab. (SNL-NM), Albuquerque, NM (United States). Geotechnology & Engineering Dept.

2016-09-08

This letter report provides a Bayou Choctaw (BC) Strategic Petroleum Reserve (SPR) well grading system based on the geomechanical simulation. The analyses described in this letter were used to evaluate the caverns’ geomechanical effect on wellbore integrity, which is an important component in the well integrity grading system recently developed by Roberts et al. [2015]. Using these analyses, the wellbores for caverns BC-17 and 20 are expected to be significantly impacted by cavern geomechanics, BC-18 and 19 are expected to be medium impacted; and the other caverns are expected to be less impacted.

The impact of individual expectations and expectation conflicts on virtual teams

NARCIS (Netherlands)

Bosch-Sijtsema, Petra

Virtual teams are characterized by geographical dispersion, organizational, and cultural heterogeneity, and their members have little history and lateral and weak relationships. Literature denotes the importance of expectations in virtual settings, but individual expectations of virtual team members

The Brave New Researcher of Doctoral Integrity Training in the Heath Sciences

DEFF Research Database (Denmark)

Sarauw, Laura Louise

2018-01-01

as points of reference for an overall discussion of the implied ideas about the ideal researcher in a comparative cross-faculty perspective: 1) Translations between international/national/institutional and local/faculty ideas about what problems the integrity training is expected to solve, 2) Translations......The presented material is a part of a wider, comparative ethnography in which we study the emerging integrity training for PhD fellows provided by four different faculties: Science, Humanities, Social Science and Business, and Health. The comparison comprises the following themes that will serve...... between standardisations of curriculum and content, local development and ideas about what problems integrity training is expected to solve. 3) Translations between ideas about adequate pedagogies and ideas about what problems integrity training is expected to solve...

Integrated silicon optoelectronics

CERN Document Server

Zimmermann, Horst

2000-01-01

'Integrated Silicon Optoelectronics'assembles optoelectronics and microelectronics The book concentrates on silicon as the major basis of modern semiconductor devices and circuits Starting from the basics of optical emission and absorption and from the device physics of photodetectors, the aspects of the integration of photodetectors in modern bipolar, CMOS, and BiCMOS technologies are discussed Detailed descriptions of fabrication technologies and applications of optoelectronic integrated circuits are included The book, furthermore, contains a review of the state of research on eagerly expected silicon light emitters In order to cover the topic of the book comprehensively, integrated waveguides, gratings, and optoelectronic power devices are included in addition Numerous elaborate illustrations promote an easy comprehension 'Integrated Silicon Optoelectronics'will be of value to engineers, physicists, and scientists in industry and at universities The book is also recommendable for graduate students speciali...

Contamination of short-chain chlorinated paraffins to the biotic and abiotic environments in the Bohai Sea.

Science.gov (United States)

Jiang, Wanyanhan; Huang, Tao; Chen, Han; Lian, Lulu; Liang, Xiaoxue; Jia, Chenhui; Gao, Hong; Mao, Xiaoxuan; Zhao, Yuan; Ma, Jianmin

2018-02-01

Short-chain chlorinated paraffins (SCCPs) have been produced and emitted intensively around the Bohai Sea, potentially causing risks to this unique ecosystem and one of primary fishery resources in China and busiest seaways in the world. Little is known about fate, cycling, and sources of SCCPs in the Bohai Sea biotic and abiotic environment. In this study, we combined a marine food web model with a comprehensive atmospheric transport-multiple phase exchange model to quantify SCCPs in the biotic and abiotic environment in the Bohai Sea. We performed multiple modeling scenario investigations to examine SCCP levels in water, sediment, and phytoplankton. We assessed numerically dry and wet depositions, biomagnification and bioaccumulation of SCCPs in the Bohai Sea marine food web. Results showed declining SCCP levels in water and sediment with increasing distance from the coastline, and so do dry and wet depositions. The net deposition overwhelmed the water-air exchange of SCCPs due to their current use in China, though the diffusive gas deposition fluctuated monthly subject to mean wind speed and temperature. A risk assessment manifests that SCCPs levels in the Bohai Sea fish species are at present not posing risks to the residents in the Bohai Sea Rim region. We identified that the SCCP emission sources in the south of the Bohai Sea made a primary contribution to its loadings to the seawater and fish contamination associated with the East Asian summer monsoon. In contrast, the SCCP emissions from the north and northwest regions of the Bohai Sea were major sources contributing to their loading and contamination to Bohai Sea food web during the wintertime, potentially driven by the East Asian winter monsoon. Copyright © 2017 Elsevier Ltd. All rights reserved.

An MFS Transporter-Like ORF from MDR Acinetobacter baumannii AIIMS 7 Is Associated with Adherence and Biofilm Formation on Biotic/Abiotic Surface

Directory of Open Access Journals (Sweden)

Praveen K. Sahu

2012-01-01

Full Text Available A major facilitator superfamily (MFS transporter-like open reading frame (ORF of 453 bp was identified in a pathogenic strain Acinetobacter baumannii AIIMS 7, and its association with adherence and biofilm formation was investigated. Reverse transcription PCR (RT-PCR showed differential expression in surface-attached biofilm cells than nonadherent cells. In vitro translation showed synthesis of a ∼17 kDa protein, further confirmed by cloning and heterologous expression in E. coli DH5. Up to 2.1-, 3.1-, and 4.1- fold biofilm augmentation was observed on abiotic (polystyrene and biotic (S. cerevisiae/HeLa surface, respectively. Scanning electron microscopy (SEM and gfp-tagged fluorescence microscopy revealed increased adherence to abiotic (glass and biotic (S. cerevisiae surface. Extracellular DNA(eDNA was found significantly during active growth; due to probable involvement of the protein in DNA export, strong sequence homology with MFS transporter proteins, and presence of transmembrane helices. In summary, our findings show that the putative MFS transporter-like ORF (pmt is associated with adherence, biofilm formation, and probable eDNA release in A. baumannii AIIMS 7.

Biotic and Abiotic Drivers of Sap Flux in Mature Green Ash Trees (Fraxinus pennsylvanica) Experiencing Varying Levels of Emerald Ash Borer (Agrilus planipennis) Infestation

Science.gov (United States)

Charles E. Flower; Douglas J. Lynch; Kathleen S. Knight; Miquel A.  Gonzalez-Meler

2018-01-01

While the relationship between abiotic drivers of sap flux are well established, the role of biotic disturbances on sap flux remain understudied. The invasion of the emerald ash borer (Agrilus planipennis Fairmaire, EAB) into North America in the 1990s represents a significant threat to ash trees (Fraxinus spp.), which are a...

Expectations

DEFF Research Database (Denmark)

depend on the reader’s own experiences, individual feelings, personal associations or on conventions of reading, interpretive communities and cultural conditions? This volume brings together narrative theory, fictionality theory and speech act theory to address such questions of expectations...

Genome-wide analysis of the grapevine stilbene synthase multigenic family: genomic organization and expression profiles upon biotic and abiotic stresses

Directory of Open Access Journals (Sweden)

Vannozzi Alessandro

2012-08-01

Full Text Available Abstract Background Plant stilbenes are a small group of phenylpropanoids, which have been detected in at least 72 unrelated plant species and accumulate in response to biotic and abiotic stresses such as infection, wounding, UV-C exposure and treatment with chemicals. Stilbenes are formed via the phenylalanine/polymalonate-route, the last step of which is catalyzed by the enzyme stilbene synthase (STS, a type III polyketide synthase (PKS. Stilbene synthases are closely related to chalcone synthases (CHS, the key enzymes of the flavonoid pathway, as illustrated by the fact that both enzymes share the same substrates. To date, STSs have been cloned from peanut, pine, sorghum and grapevine, the only stilbene-producing fruiting-plant for which the entire genome has been sequenced. Apart from sorghum, STS genes appear to exist as a family of closely related genes in these other plant species. Results In this study a complete characterization of the STS multigenic family in grapevine has been performed, commencing with the identification, annotation and phylogenetic analysis of all members and integration of this information with a comprehensive set of gene expression analyses including healthy tissues at differential developmental stages and in leaves exposed to both biotic (downy mildew infection and abiotic (wounding and UV-C exposure stresses. At least thirty-three full length sequences encoding VvSTS genes were identified, which, based on predicted amino acid sequences, cluster in 3 principal groups designated A, B and C. The majority of VvSTS genes cluster in groups B and C and are located on chr16 whereas the few gene family members in group A are found on chr10. Microarray and mRNA-seq expression analyses revealed different patterns of transcript accumulation between the different groups of VvSTS family members and between VvSTSs and VvCHSs. Indeed, under certain conditions the transcriptional response of VvSTS and VvCHS genes appears to be

The link between individual expectations and savings: Do nursing home expectations matter?

DEFF Research Database (Denmark)

Kleinjans, Kristin J.; Lee, Jinkook

these expectations and savings behavior, using data from the Health and Retirement Study. We find a clear relation between subjective expectations and probability of future nursing home entry, and a positive effect of these expectations on savings behavior. Surprisingly, we find no difference of this effect...... by wealth group, so it seems that Medicaid eligibility in the context of nursing home entry plays no factor in the decision to save....

Box Integrals

Energy Technology Data Exchange (ETDEWEB)

Bailey, David H.; Borwein, Jonathan M.; Crandall, Richard E.

2006-06-01

By a "box integral" we mean here an expectation $\\langle|\\vec r - \\vec q|^s \\rangle$ where $\\vec r$runs over the unit $n$-cube,with $\\vec q$ and $s$ fixed, explicitly:\\begin eqnarray*&&\\int_01 \\cdots \\int_01 \\left((r_1 - q_1)2 + \\dots+(r_n-q_n)2\\right)^ s/2 \\ dr_1 \\cdots dr_n.\\end eqnarray* The study ofbox integrals leads one naturally into several disparate fields ofanalysis. While previous studies have focused upon symbolic evaluationand asymptotic analysis of special cases (notably $s = 1$), we workherein more generally--in interdisciplinary fashion--developing resultssuch as: (1) analytic continuation (in complex $s$), (2) relevantcombinatorial identities, (3) rapidly converging series, (4) statisticalinferences, (5) connections to mathematical physics, and (6)extreme-precision quadrature techniques appropriate for these integrals.These intuitions and results open up avenues of experimental mathematics,with a view to new conjectures and theorems on integrals of thistype.

Circulation of copper in the biotic compartments of a freshwater dammed reservoir

International Nuclear Information System (INIS)

Vinot, I.; Pihan, J.C.

2005-01-01

This study concerns a chronic copper release in an aquatic ecosystem: Mirgenbach reservoir; which is characterized by high salinity, conductivity and hardness, a eutrophic state and a high temperature. To study the bioavailability of copper in the biotic compartments, the sampling covered the entire food chain (phyto- and zooplankton, macroalgae, aquatic plants, crustaceans, mollusks, and fish). Of the organisms present, the filter feeder Dreissena polymorpha, the detritivorous Bithynia tentaculata and Orconectes limosus were most contaminated by copper. The level of copper found in fish was the lowest. Body copper concentrations recorded in the present study show large variability between species even in some that are closely related. In most cases, however, the metal handling strategy, feeding habits, morphology and ecology can, at least partially, explain the metal content recorded. Pollution factors have been used to assess the state of contamination of the food chain. This study showed finally that the copper in the lake is bioavailable and bioaccumulated by organisms up to high levels and some effects of long-term toxicity of copper on benthic community and planktonic biomass were pointed out

Circulation of copper in the biotic compartments of a freshwater dammed reservoir.

Science.gov (United States)

Vinot, I; Pihan, J C

2005-01-01

This study concerns a chronic copper release in an aquatic ecosystem: Mirgenbach reservoir; which is characterized by high salinity, conductivity and hardness, a eutrophic state and a high temperature. To study the bioavailability of copper in the biotic compartments, the sampling covered the entire food chain (phyto- and zooplankton, macroalgae, aquatic plants, crustaceans, mollusks, and fish). Of the organisms present, the filter feeder Dreissena polymorpha, the detritivorous Bithynia tentaculata and Orconectes limosus were most contaminated by copper. The level of copper found in fish was the lowest. Body copper concentrations recorded in the present study show large variability between species even in some that are closely related. In most cases, however, the metal handling strategy, feeding habits, morphology and ecology can, at least partially, explain the metal content recorded. Pollution factors have been used to assess the state of contamination of the food chain. This study showed finally that the copper in the lake is bioavailable and bioaccumulated by organisms up to high levels and some effects of long-term toxicity of copper on benthic community and planktonic biomass were pointed out.

Circulation of copper in the biotic compartments of a freshwater dammed reservoir

Energy Technology Data Exchange (ETDEWEB)

Vinot, I.; Pihan, J.C

2005-01-01

This study concerns a chronic copper release in an aquatic ecosystem: Mirgenbach reservoir; which is characterized by high salinity, conductivity and hardness, a eutrophic state and a high temperature. To study the bioavailability of copper in the biotic compartments, the sampling covered the entire food chain (phyto- and zooplankton, macroalgae, aquatic plants, crustaceans, mollusks, and fish). Of the organisms present, the filter feeder Dreissena polymorpha, the detritivorous Bithynia tentaculata and Orconectes limosus were most contaminated by copper. The level of copper found in fish was the lowest. Body copper concentrations recorded in the present study show large variability between species even in some that are closely related. In most cases, however, the metal handling strategy, feeding habits, morphology and ecology can, at least partially, explain the metal content recorded. Pollution factors have been used to assess the state of contamination of the food chain. This study showed finally that the copper in the lake is bioavailable and bioaccumulated by organisms up to high levels and some effects of long-term toxicity of copper on benthic community and planktonic biomass were pointed out.

Between hope and fear: patient's expectations prior to pelvic organ prolapse surgery.

Science.gov (United States)

Lawndy, Sameh S S; Withagen, Mariella I; Kluivers, Kirsten B; Vierhout, Mark E

2011-09-01

The aim of our study was to analyse the patient's expectations (fears and goals (hopes)) in women who are scheduled for pelvic organ prolapse (POP) surgery. All consecutive women awaiting surgery for POP in a tertiary urogynaecological centre were included. A short questionnaire with two open questions on goals and fears with regard to the operation was used. Ninety-six out of 111 distributed questionnaires (86%) were analysed. Goals and fears were categorized into five groups. De novo symptoms (63%), POP recurrence (34%) and surgical complications (29%) were the most important fears. Symptom release (96%), improved lifestyle (physical capabilities; 30%) and improved sexual life (18%) were important goals. A wide variety of expectations both positive and negative can be found in women before POP surgery and should be an integral part of preoperative counselling. Achieving the individual goals as based on expectations, positive (goals) and negative (fears), should be part of the POP surgery evaluation.

What I expect from an orthopaedic traumatology fellow.

Science.gov (United States)

Lee Chip Routt, Milton; Stark, Delbert H

2014-09-01

After 2.5 decades working with a variety of orthopaedic traumatology fellows, I have learned that several qualities and behaviors are important to a successful experience. Most fellows possess them, but some do not. Those that do usually integrate quickly onto the team and are rewarded with enriched teaching and clinical experiences. Some that do not may be able to adjust or alter their behaviors and eventually fit in. Some cannot adjust and their experiences suffer. I realize that no 2 individuals are the same, so my expectations of a fellow serve as a relationship foundation to then build their experiences upon. Their qualities and behaviors guide our relationship.

Designing interaction behaviour in service-oriented enterprise application integration

NARCIS (Netherlands)

Dirgahayu, T.; Quartel, Dick; van Sinderen, Marten J.

In this paper we present an approach for designing interaction behaviour in service-oriented enterprise application integration. The approach enables business analysts to actively participate in the design of an integration solution. In this way, we expect that the solution meets its integration

Biotic and abiotic catalysis of nitrate reduction in alkaline environment of repository storage cell for long-lived intermediate-level radioactive wastes

International Nuclear Information System (INIS)

Bertron, A.; Jacquemet, N.; Escadeillas, G.; Erable, B.; Alquier, M.; Kassim, C.; Albasi, C.; Basseguy, R.; Strehaiano, P.; Sablayrolles, C.; Vignoles, M.; Albrecht, A.

2013-01-01

This study investigates the reactivity of nitrates at the bitumen-concrete interface with the aim of determining redox conditions inside a repository storage cell for long-lived intermediate-level radioactive wastes. The first part of the work aimed to identify, under abiotic conditions, the interactions between two components of the system: concrete (introduced as cement pastes in the system) and bitumen (represented by leachates composed of organic acids and nitrates). The second part of the study was conducted under biotic conditions with selected denitrifying heterotrophic bacteria (Pseudomonas stutzeri - Ps and Halomonas desiderata - Hd) and aimed to analyse the microbial reaction of nitrate reduction (kinetics, by-products, role of the organic matter) under neutral to alkaline pH conditions (i.e. imposed by a concrete environment). Results showed that strong interactions occurred between cementitious matrices and acetic and oxalic organic acids, likely reducing the bio-availability of this organic matter (oxalate in particular). Results also confirmed the stability of nitrates under these conditions. Under biotic conditions, nitrates were reduced by both Ps and Hd following an anaerobic denitrification metabolic pathway. Reduction kinetics was higher with Ps but the reaction was inhibited for pH ≥ 9. Hd was capable of denitrification at least up to pH 11. (authors)

Geologic drivers of late ordovician faunal change in laurentia: investigating links between tectonics, speciation, and biotic invasions.

Directory of Open Access Journals (Sweden)

David F Wright

Full Text Available Geologic process, including tectonics and global climate change, profoundly impact the evolution of life because they have the propensity to facilitate episodes of biogeographic differentiation and influence patterns of speciation. We investigate causal links between a dramatic faunal turnover and two dominant geologic processes operating within Laurentia during the Late Ordovician: the Taconian Orogeny and GICE related global cooling. We utilize a novel approach for elucidating the relationship between biotic and geologic changes using a time-stratigraphic, species-level evolutionary framework for articulated brachiopods from North America. Phylogenetic biogeographic analyses indicate a fundamental shift in speciation mode-from a vicariance to dispersal dominated macroevolutionary regime-across the boundary between the Sandbian to Katian Stages. This boundary also corresponds to the onset of renewed intensification of tectonic activity and mountain building, the development of an upwelling zone that introduced cool, nutrient-rich waters into the epieric seas of eastern Laurentia, and the GICE isotopic excursion. The synchronicity of these dramatic geologic, oceanographic, and macroevolutionary changes supports the influence of geologic events on biological evolution. Together, the renewed tectonic activity and oceanographic changes facilitated fundamental changes in habitat structure in eastern North America that reduced opportunities for isolation and vicariance. They also facilitated regional biotic dispersal of taxa that led to the subsequent establishment of extrabasinal (=invasive species and may have led to a suppression of speciation within Laurentian faunas. Phylogenetic biogeographic analysis further indicates that the Richmondian Invasion was a multidirectional regional invasion event that involved taxa immigrating into the Cincinnati region from basins located near the continental margins and within the continental interior.

Assessment of biotic response to heavy metal contamination in Avicennia marina mangrove ecosystems in Sydney Estuary, Australia.

Science.gov (United States)

Nath, Bibhash; Chaudhuri, Punarbasu; Birch, Gavin

2014-09-01

Mangrove forests act as a natural filter of land-derived wastewaters along industrialized tropical and sub-tropical coastlines and assist in maintaining a healthy living condition for marine ecosystems. Currently, these intertidal communities are under serious threat from heavy metal contamination induced by human activity associated with rapid urbanization and industrialization. Studies on the biotic responses of these plants to heavy metal contamination are of great significance in estuary management and maintaining coastal ecosystem health. The main objective of the present investigation was to assess the biotic response in Avicennia marina ecosystems to heavy metal contamination through the determination of metal concentrations in leaves, fine nutritive roots and underlying sediments collected in fifteen locations across Sydney Estuary (Australia). Metal concentrations (especially Cu, Pb and Zn) in the underlying sediments of A. marina were enriched to a level (based on Interim Sediment Quality Guidelines) at which adverse biological effects to flora could occasionally occur. Metals accumulated in fine nutritive roots greater than underlying sediments, however, only minor translocation of these metals to A. marina leaves was observed (mean translocation factors, TFs, for all elements micro-nutrients, Cu, Ni, Mn and Zn) were greater than non-essential elements (As, Cd, Co, Cr and Pb), suggesting that A. marina mangroves of this estuary selectively excluded non-essential elements, while regulating essential elements and limiting toxicity to plants. This study supports the notion that A. marina mangroves act as a phytostabilizer in this highly modified estuary thereby protecting the aquatic ecosystem from point or non-point sources of heavy metal contamination. Copyright © 2014 Elsevier Inc. All rights reserved.

Toward efficient computation of the expected relative entropy for nonlinear experimental design

International Nuclear Information System (INIS)

Coles, Darrell; Prange, Michael

2012-01-01

The expected relative entropy between prior and posterior model-parameter distributions is a Bayesian objective function in experimental design theory that quantifies the expected gain in information of an experiment relative to a previous state of knowledge. The expected relative entropy is a preferred measure of experimental quality because it can handle nonlinear data-model relationships, an important fact due to the ubiquity of nonlinearity in science and engineering and its effects on post-inversion parameter uncertainty. This objective function does not necessarily yield experiments that mediate well-determined systems, but, being a Bayesian quality measure, it rigorously accounts for prior information which constrains model parameters that may be only weakly constrained by the optimized dataset. Historically, use of the expected relative entropy has been limited by the computing and storage requirements associated with high-dimensional numerical integration. Herein, a bifocal algorithm is developed that makes these computations more efficient. The algorithm is demonstrated on a medium-sized problem of sampling relaxation phenomena and on a large problem of source–receiver selection for a 2D vertical seismic profile. The method is memory intensive but workarounds are discussed. (paper)

The role of water tracks in altering biotic and abiotic soil properties and processes in a polar desert in Antarctica

Science.gov (United States)

Ball, Becky A.; Levy, Joseph

2015-02-01

Groundwater discharge via water tracks is a largely unexplored passageway routing salts and moisture from high elevations to valley floors in the McMurdo Dry Valleys (MDV) of Antarctica. Given the influence that water tracks have on the distribution of liquid water in seasonally thawed Antarctic soils, it is surprising how little is known about their role in structuring biotic and abiotic processes this cold desert ecosystem. Particularly, it is unclear how soil biota will respond to the activation of new water tracks resulting from enhanced active layer thickening or enhanced regional snowmelt. In the MDV, water tracks are both wetter and more saline than the surrounding soils, constituting a change in soil habitat suitability for soil biology and therefore the ecological processes they carry out. To investigate the net impact that water tracks have on Dry Valley soil biology, and therefore the ecosystem processes for which they are responsible, we analyzed microbial biomass and activity in soils inside and outside of three water tracks and relate this to the physical soil characteristics. Overall, our results suggest that water tracks can significantly influence soil properties, which can further impact biological biovolume and both biotic and abiotic fluxes of CO2. However, the nature of its impact differs with water track, further suggesting that not all water tracks can be regarded the same.

ZmGns, a maize class I b-1,3-glucanase, is induced by biotic stresses and possesses strong antimicrobial activity

Institute of Scientific and Technical Information of China (English)

Yu-Rong Xie; Yenjit Raruang; Zhi-Yuan Chen; Robert L Brown; Thomas E Cleveland

2015-01-01

Plant b‐1,3‐glucanases are members of the patho-genesis‐related protein 2 (PR‐2) family, which is one of the 17 PR protein families and plays important roles in biotic and abiotic stress responses. One of the differential y expressed proteins (spot 842) identified in a recent proteomic comparison between five pairs of closely related maize (Zea mays L.) lines differing in aflatoxin resistance was further investigated in the present study. Here, the corresponding cDNA was cloned from maize and designated as ZmGns. ZmGns encodes a protein of 338 amino acids containing a potential signal peptide. The expression of ZmGns was detectible in al tissues studied with the highest level in silks. ZmGns was significantly induced by biotic stresses including three bacteria and the fungus Aspergillus flavus. ZmGns was also induced by most abiotic stresses tested and growth hormones including salicylic acid. In vivo, ZmGns showed a significant inhibitory activity against the bacterial pathogen Pseudomonas syringae pv. tomato DC3000 and fungal pathogen Botrytis cinerea when it overexpressed in Arabidopsis. Its high level of expression in the silk tissue and its induced expression by phytohormone treatment, as wel as by bacterial and fungal infections, suggest it plays a complex role in maize growth, development, and defense.

Using Unmanned Aerial Vehicles to Assess Vegetative Cover and Identify Biotic Resources in Sagebrush Steppe Ecosystems: Preliminary Evaluation

Energy Technology Data Exchange (ETDEWEB)

Robert P. Breckenridge

2006-04-01

The Idaho National Laboratory (INL), in conjunction with the University of Idaho, is evaluating novel approaches for using unmanned aerial vehicles (UAVs) as a quicker and safer method for monitoring biotic resources. Evaluating vegetative cover is an important factor in understanding the sustainability of many ecosystems. In assessing vegetative cover, methods that improve accuracy and cost efficiency could revolutionize how biotic resources are monitored on western federal lands. Sagebrush steppe ecosystems provide important habitat for a variety of species, some of which are important indicator species (e.g., sage grouse). Improved methods are needed to support monitoring these habitats because there are not enough resource specialists or funds available for comprehensive ground evaluation of these ecosystems. In this project, two types of UAV platforms (fixed wing and helicopter) were used to collect still-frame imagery to assess cover in sagebrush steppe ecosystems. This paper discusses the process for collecting and analyzing imagery from the UAVs to (1) estimate total percent cover, (2) estimate percent cover for six different types of vegetation, and (3) locate sage grouse based on representative decoys. The field plots were located on the INL site west of Idaho Falls, Idaho, in areas with varying amounts and types of vegetative cover. A software program called SamplePoint developed by the U.S. Department of Agriculture, Agricultural Research Service was used to evaluate the imagery for percent cover for the six vegetation types (bare ground, litter, shrubs, dead shrubs, grasses, and forbs). Results were compared against standard field measurements to assess accuracy.

Identification and expression of the WRKY transcription factors of Carica papaya in response to abiotic and biotic stresses.

Science.gov (United States)

Pan, Lin-Jie; Jiang, Ling

2014-03-01

The WRKY transcription factor (TF) plays a very important role in the response of plants to various abiotic and biotic stresses. A local papaya database was built according to the GenBank expressed sequence tag database using the BioEdit software. Fifty-two coding sequences of Carica papaya WRKY TFs were predicted using the tBLASTn tool. The phylogenetic tree of the WRKY proteins was classified. The expression profiles of 13 selected C. papaya WRKY TF genes under stress induction were constructed by quantitative real-time polymerase chain reaction. The expression levels of these WRKY genes in response to 3 abiotic and 2 biotic stresses were evaluated. TF807.3 and TF72.14 are upregulated by low temperature; TF807.3, TF43.76, TF12.199 and TF12.62 are involved in the response to drought stress; TF9.35, TF18.51, TF72.14 and TF12.199 is involved in response to wound; TF12.199, TF807.3, TF21.156 and TF18.51 was induced by PRSV pathogen; TF72.14 and TF43.76 are upregulated by SA. The regulated expression levels of above eight genes normalized against housekeeping gene actin were significant at probability of 0.01 levels. These WRKY TFs could be related to corresponding stress resistance and selected as the candidate genes, especially, the two genes TF807.3 and TF12.199, which were regulated notably by four stresses respectively. This study may provide useful information and candidate genes for the development of transgenic stress tolerant papaya varieties.

Building Interfaces: Mechanisms, fabrication, and applications at the biotic/abiotic interface for silk fibroin based bioelectronic and biooptical devices

Science.gov (United States)

Brenckle, Mark

Recent efforts in bioelectronics and biooptics have led to a shift in the materials and form factors used to make medical devices, including high performance, implantable, and wearable sensors. In this context, biopolymer-based devices must be processed to interface the soft, curvilinear biological world with the rigid, inorganic world of traditional electronics and optics. This poses new material-specific fabrication challenges in designing such devices, which in turn requires further understanding of the fundamental physical behaviors of the materials in question. As a biopolymer, silk fibroin protein has remarkable promise in this space, due to its bioresorbability, mechanical strength, optical clarity, ability to be reshaped on the micro- and nano-scale, and ability to stabilize labile compounds. Application of this material to devices at the biotic/abiotic interface will require the development of fabrication techniques for nano-patterning, lithography, multilayer adhesion, and transfer printing in silk materials. In this work, we address this need through fundamental study of the thermal and diffusional properties of silk protein as it relates to these fabrication strategies. We then leverage these properties to fabricate devices well suited to the biotic/abiotic interface in three areas: shelf-ready sensing, implantable transient electronics, and wearable biosensing. These example devices will illustrate the advantages of silk in this class of bioelectronic and biooptical devices, from fundamentals through application, and contribute to a silk platform for the development of future devices that combine biology with high technology.

Risk-sensitivity in Bayesian sensorimotor integration.

Directory of Open Access Journals (Sweden)

Jordi Grau-Moya

Full Text Available Information processing in the nervous system during sensorimotor tasks with inherent uncertainty has been shown to be consistent with Bayesian integration. Bayes optimal decision-makers are, however, risk-neutral in the sense that they weigh all possibilities based on prior expectation and sensory evidence when they choose the action with highest expected value. In contrast, risk-sensitive decision-makers are sensitive to model uncertainty and bias their decision-making processes when they do inference over unobserved variables. In particular, they allow deviations from their probabilistic model in cases where this model makes imprecise predictions. Here we test for risk-sensitivity in a sensorimotor integration task where subjects exhibit Bayesian information integration when they infer the position of a target from noisy sensory feedback. When introducing a cost associated with subjects' response, we found that subjects exhibited a characteristic bias towards low cost responses when their uncertainty was high. This result is in accordance with risk-sensitive decision-making processes that allow for deviations from Bayes optimal decision-making in the face of uncertainty. Our results suggest that both Bayesian integration and risk-sensitivity are important factors to understand sensorimotor integration in a quantitative fashion.

Three dimensional system integration

CERN Document Server

Papanikolaou, Antonis; Radojcic, Riko

2010-01-01

Three-dimensional (3D) integrated circuit (IC) stacking is the next big step in electronic system integration. It enables packing more functionality, as well as integration of heterogeneous materials, devices, and signals, in the same space (volume). This results in consumer electronics (e.g., mobile, handheld devices) which can run more powerful applications, such as full-length movies and 3D games, with longer battery life. This technology is so promising that it is expected to be a mainstream technology a few years from now, less than 10-15 years from its original conception. To achieve thi

Elliptic polylogarithms and iterated integrals on elliptic curves. II. An application to the sunrise integral

Science.gov (United States)

Broedel, Johannes; Duhr, Claude; Dulat, Falko; Tancredi, Lorenzo

2018-06-01

We introduce a class of iterated integrals that generalize multiple polylogarithms to elliptic curves. These elliptic multiple polylogarithms are closely related to similar functions defined in pure mathematics and string theory. We then focus on the equal-mass and non-equal-mass sunrise integrals, and we develop a formalism that enables us to compute these Feynman integrals in terms of our iterated integrals on elliptic curves. The key idea is to use integration-by-parts identities to identify a set of integral kernels, whose precise form is determined by the branch points of the integral in question. These kernels allow us to express all iterated integrals on an elliptic curve in terms of them. The flexibility of our approach leads us to expect that it will be applicable to a large variety of integrals in high-energy physics.

The Late Devonian Frasnian-Famennian (F/F) biotic crisis: Insights from δ13C carb, δ13C org and 87Sr / 86Sr isotopic systematics

Science.gov (United States)

Chen, Daizhao; Qing, Hairuo; Li, Renwei

2005-06-01

A severe biotic crisis occurred during the Late Devonian Frasnian-Famennian (F/F) transition (± 367 Myr). Here we present δ13C carb, δ13C org and 87Sr / 86Sr isotopic systematics, from identical samples of two sections across F/F boundary in South China, which directly demonstrate large and frequent climatic fluctuations (˜200 kyr) from warming to cooling during the F/F transition. These climate fluctuations are interpreted to have been induced initially by increased volcanic outgassing, and subsequent enhanced chemical weathering linked to the rapid expansion of vascular plants on land, which would have increased riverine delivery to oceans and primary bioproductivity, and subsequent burial of organic matter, thereby resulting in climate cooling. Such large and frequent climatic fluctuations, together with volcanic-induced increases in nutrient (e.g., biolimiting Fe), toxin (sulfide) and anoxic water supply, and subsequent enhanced riverine fluxes and microbial bloom, were likely responsible for the stepwise faunal demise of F/F biotic crisis.

Cannabis expectancies in substance misusers: French validation of the Marijuana Effect Expectancy Questionnaire.

Science.gov (United States)

Guillem, Eric; Notides, Christine; Vorspan, Florence; Debray, Marcel; Nieto, Isabel; Leroux, Mayliss; Lépine, Jean-Pierre

2011-01-01

The aim of this study was to evaluate the psychometric properties of the French version of the Marijuana Effect Expectancy Questionnaire (48 items) and study the cannabis expectancies according to the patterns of substance use and psychiatric disorders (DSM-IV). A sample of 263 subjects (average age 33.1 years [SD = 8.7], 56% men) consisting of cannabis users (n = 64), psychiatric inpatients (n = 175, most of whom were hospitalized for withdrawal), and a control group (n = 24) completed the questionnaire. Internal reliability was good (α= .87) and temporal reliability was satisfactory, with 24 of 48 items having a significant κ ≥ .41. Factor analysis showed four main factors that explained 42.1% of the total variance. The women feared Cognitive Impairment and Negative Effects, and Negative Behavioral Effects more than the men. The onset age of cannabis use, onset age of abuse, abuse and dependence were associated with fewer negative expectancies. Cannabis dependents differed from abusers by more Relaxation and Social Facilitation expectancies. Patients with major depressive episodes, panic disorder, social anxiety disorder, or posttraumatic stress disorder feared negative effects the most. Schizophrenic patients expected more Perceptual Enhancement and Craving. The French version of the Marijuana Effect Expectancy Questionnaire has good psychometric properties and is valid to assess cannabis expectancies in adolescents and adults with substance use disorders. Copyright © American Academy of Addiction Psychiatry.

Diverse Expected Gradient Active Learning for Relative Attributes.

Science.gov (United States)

You, Xinge; Wang, Ruxin; Tao, Dacheng

2014-06-02

The use of relative attributes for semantic understanding of images and videos is a promising way to improve communication between humans and machines. However, it is extremely labor- and time-consuming to define multiple attributes for each instance in large amount of data. One option is to incorporate active learning, so that the informative samples can be actively discovered and then labeled. However, most existing active-learning methods select samples one at a time (serial mode), and may therefore lose efficiency when learning multiple attributes. In this paper, we propose a batch-mode active-learning method, called Diverse Expected Gradient Active Learning (DEGAL). This method integrates an informativeness analysis and a diversity analysis to form a diverse batch of queries. Specifically, the informativeness analysis employs the expected pairwise gradient length as a measure of informativeness, while the diversity analysis forces a constraint on the proposed diverse gradient angle. Since simultaneous optimization of these two parts is intractable, we utilize a two-step procedure to obtain the diverse batch of queries. A heuristic method is also introduced to suppress imbalanced multi-class distributions. Empirical evaluations of three different databases demonstrate the effectiveness and efficiency of the proposed approach.

On the Expected Discounted Penalty Function for the Classical Risk Model with Potentially Delayed Claims and Random Incomes

Directory of Open Access Journals (Sweden)

Huiming Zhu

2014-01-01

Full Text Available We focus on the expected discounted penalty function of a compound Poisson risk model with random incomes and potentially delayed claims. It is assumed that each main claim will produce a byclaim with a certain probability and the occurrence of the byclaim may be delayed depending on associated main claim amount. In addition, the premium number process is assumed as a Poisson process. We derive the integral equation satisfied by the expected discounted penalty function. Given that the premium size is exponentially distributed, the explicit expression for the Laplace transform of the expected discounted penalty function is derived. Finally, for the exponential claim sizes, we present the explicit formula for the expected discounted penalty function.

Future Expectations of High School Students In Southeastern Turkey: Factors behind Future Expectations

Directory of Open Access Journals (Sweden)

Hüseyin Şimşek

2012-01-01

Full Text Available This study was conducted to identify various future expectations of high school students in southeastern Turkey and factors behind their expectations. The sample of the study, which had a descriptive and associational survey design consisted of 1106 students randomly selected from 54 different high schools located in nine cities in southeastern Turkey. Data were collected through the “Future Expectation Scale (FES” developed by the researcher. Results indicated that personal and professional future, educational future, economic future and social future expectations of high school students in southeastern Turkey were generally above the average level. According to the study, being a teacher and a doctor took the first place among several professions to be further preferred by high school students. It was also concluded that future expectations of high school students did not differ on gender, high school type, CGPA, level of mother education, father’s occupation, family income level, the number of siblings, receiving pre-school education, and language spoken at home. On the other hand, future expectations of high school students were found to differ on the city where students being taught, grade level, corporal punishment, and tendency toward being a dropout.

Great Expectations: How Role Expectations and Role Experiences Relate to Perceptions of Group Cohesion.

Science.gov (United States)

Benson, Alex J; Eys, Mark A; Irving, P Gregory

2016-04-01

Many athletes experience a discrepancy between the roles they expect to fulfill and the roles they eventually occupy. Drawing from met expectations theory, we applied response surface methodology to examine how role expectations, in relation to role experiences, influence perceptions of group cohesion among Canadian Interuniversity Sport athletes (N = 153). On the basis of data from two time points, as athletes approached and exceeded their role contribution expectations, they reported higher perceptions of task cohesion. Furthermore, as athletes approached and exceeded their social involvement expectations, they reported higher perceptions of social cohesion. These response surface patterns-pertaining to task and social cohesion-were driven by the positive influence of role experiences. On the basis of the interplay between athletes' role experiences and their perception of the group environment, efforts to improve team dynamics may benefit from focusing on improving the quality of role experiences, in conjunction with developing realistic role expectations.

Investigating and improving student understanding of the expectation values of observables in quantum mechanics

International Nuclear Information System (INIS)

Marshman, Emily; Singh, Chandralekha

2017-01-01

The expectation value of an observable is an important concept in quantum mechanics since measurement outcomes are, in general, probabilistic and we only have information about the probability distribution of measurement outcomes in a given quantum state of a system. However, we find that upper-level undergraduate and PhD students in physics have both conceptual and procedural difficulties when determining the expectation value of a physical observable in a given quantum state in terms of the eigenstates and eigenvalues of the corresponding operator, especially when using Dirac notation. Here we first describe the difficulties that these students have with determining the expectation value of an observable in Dirac notation. We then discuss how the difficulties found via student responses to written surveys and individual interviews were used as a guide in the development of a quantum interactive learning tutorial (QuILT) to help students develop a good grasp of the expectation value. The QuILT strives to help students integrate conceptual understanding and procedural skills to develop a coherent understanding of the expectation value. We discuss the effectiveness of the QuILT in helping students learn this concept from in-class evaluations. (paper)

Grape expectations: the role of cognitive influences in color-flavor interactions.

Science.gov (United States)

Shankar, Maya U; Levitan, Carmel A; Spence, Charles

2010-03-01

Color conveys critical information about the flavor of food and drink by providing clues as to edibility, flavor identity, and flavor intensity. Despite the fact that more than 100 published papers have investigated the influence of color on flavor perception in humans, surprisingly little research has considered how cognitive and contextual constraints may mediate color-flavor interactions. In this review, we argue that the discrepancies demonstrated in previously-published color-flavor studies may, at least in part, reflect differences in the sensory expectations that different people generate as a result of their prior associative experiences. We propose that color-flavor interactions in flavor perception cannot be understood solely in terms of the principles of multisensory integration (the currently dominant theoretical framework) but that the role of higher-level cognitive factors, such as expectations, must also be considered.

Integration, de-integration and liberal controlled finance

International Nuclear Information System (INIS)

Deyirmendjian, J.

2008-01-01

With the forthcoming adoption of the 3. directive of the European Commission project, the European Union will make a new step towards integration. The stake for gas or electric utilities is of prime importance: each will have to de-integrate and positioned itself as an infrastructure company or as a production and commercialization company. In other words, they will have to chose between 'regulation and recurrent incomes' or 'fortunes and risks of production and trade'. Such changes, added to the globalization of gas trades linked with the development of LNG, require more investments than in the past. However, these over-investments combined to technical progresses allow to expect that this mutation will not significantly weaken the security of gas supplies in the European Union. The end-user, on the other hand, will certainly not make any profit of this integration considering the enhanced volatility of markets more and more dominated by the speculative strategies of financial operators. (J.S.)

Patient (customer) expectations in hospitals.

Science.gov (United States)

Bostan, Sedat; Acuner, Taner; Yilmaz, Gökhan

2007-06-01

The expectations of patient are one of the determining factors of healthcare service. The purpose of this study is to measure the Patients' Expectations, based on Patient's Rights. This study was done with Likert-Survey in Trabzon population. The analyses showed that the level of the expectations of the patient was high on the factor of receiving information and at an acceptable level on the other factors. Statistical meaningfulness was determined between age, sex, education, health insurance, and the income of the family and the expectations of the patients (pstudy, the current legal regulations have higher standards than the expectations of the patients. The reason that the satisfaction of the patients high level is interpreted due to the fact that the level of the expectation is low. It is suggested that the educational and public awareness studies on the patients' rights must be done in order to increase the expectations of the patients.

Integrated Wind Power Planning Tool

DEFF Research Database (Denmark)

Rosgaard, M. H.; Giebel, Gregor; Nielsen, T. S.

2012-01-01

model to be developed in collaboration with ENFOR A/S; a danish company that specialises in forecasting and optimisation for the energy sector. This integrated prediction model will allow for the description of the expected variability in wind power production in the coming hours to days, accounting......This poster presents the current state of the public service obligation (PSO) funded project PSO 10464, with the working title "Integrated Wind Power Planning Tool". The project commenced October 1, 2011, and the goal is to integrate a numerical weather prediction (NWP) model with purely...

The importance of biotic factors in predicting global change effects on decomposition of temperate forest leaf litter.

Science.gov (United States)

Rouifed, Soraya; Handa, I Tanya; David, Jean-François; Hättenschwiler, Stephan

2010-05-01

Increasing atmospheric CO(2) and temperature are predicted to alter litter decomposition via changes in litter chemistry and environmental conditions. The extent to which these predictions are influenced by biotic factors such as litter species composition or decomposer activity, and in particular how these different factors interact, is not well understood. In a 5-week laboratory experiment we compared the decomposition of leaf litter from four temperate tree species (Fagus sylvatica, Quercus petraea, Carpinus betulus and Tilia platyphyllos) in response to four interacting factors: elevated CO(2)-induced changes in litter quality, a 3 degrees C warmer environment during decomposition, changes in litter species composition, and presence/absence of a litter-feeding millipede (Glomeris marginata). Elevated CO(2) and temperature had much weaker effects on decomposition than litter species composition and the presence of Glomeris. Mass loss of elevated CO(2)-grown leaf litter was reduced in Fagus and increased in Fagus/Tilia mixtures, but was not affected in any other leaf litter treatment. Warming increased litter mass loss in Carpinus and Tilia, but not in the other two litter species and in none of the mixtures. The CO(2)- and temperature-related differences in decomposition disappeared completely when Glomeris was present. Overall, fauna activity stimulated litter mass loss, but to different degrees depending on litter species composition, with a particularly strong effect on Fagus/Tilia mixtures (+58%). Higher fauna-driven mass loss was not followed by higher C mineralization over the relatively short experimental period. Apart from a strong interaction between litter species composition and fauna, the tested factors had little or no interactive effects on decomposition. We conclude that if global change were to result in substantial shifts in plant community composition and macrofauna abundance in forest ecosystems, these interacting biotic factors could have

Coordinator Role Mobility Method for Increasing the Life Expectancy of Wireless Sensor Networks

Directory of Open Access Journals (Sweden)

Jurenoks Aleksejs

2017-05-01

Full Text Available The general problem of wireless sensor network nodes is the low-power batteries that significantly limit the life expectancy of a network. Nowadays the technical solutions related to energy resource management are being rapidly developed and integrated into the daily lives of people. The energy resource management systems use sensor networks for receiving and processing information during the realia time. The present paper proposes using a coordinator role mobility method for controlling the routing processes for energy balancing in nodes, which provides dynamic network reconfiguration possibilities. The method is designed to operate fully in the background and can be integrated into any exiting working system.

An Integrated Model to Explain Inter-Relationships in Travel ...

African Journals Online (AJOL)

This study focuses on the decision making process of international tourists traveling to Tanzania. An integrated approach is proposed to understand the interrelationships among tourist motivations, expectations, place identity and place dependence. Specifically, travel motivations directly affect tourist's expectations and ...

Technetium Reduction and Permanent Sequestration by Abiotic and Biotic Formation of Low-Solubility Sulfide Mineral Phases

Energy Technology Data Exchange (ETDEWEB)

Tratnyek, Paul G. [Oregon Health & Science Univ., Beaverton, OR (United States); Tebo, Bradley M. [Oregon Health & Science Univ., Beaverton, OR (United States); Fan, Dimin [Oregon Health & Science Univ., Beaverton, OR (United States); Anitori, Roberto [Oregon Health & Science Univ., Beaverton, OR (United States); Szecsody, Jim [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Jansik, Danielle [Pacific Northwest National Lab. (PNNL), Richland, WA (United States)

2015-11-14

One way to minimize the mobility of the Tc^VII oxyanion pertechnetate (TcO₄^-) is to effect reduction under sulfidogenic conditions (generated abiotically by Fe₀ or biotically) to form TcS_x, which is significantly slower to oxidize than Tc^IVO₂. In sediment systems, TcS_x and other precipitates may oxidize more slowly due to oxygen diffusion limitations to these low permeability precipitate zones. In addition, the TcO₄^- reduction rate may be more rapid in the presence of sediment because of additional reductive surface phases. This project aims to provide a fundamental understanding of the feasibility of immobilization of TcO₄^- as TcS_x in the vadose zone or groundwater by application nano zero-valent iron (nZVI), and sulfide or sulfate. Biotic batch experiments have used the sulfate-reducing bacterium (SRB) Desulfotomaculum reducens. The iron sulfide mineral mackinawite was generated under these conditions, while vivianite was formed in nZVI only controls. The sulfide/bacteria-containing system consistently reduced aqueous pertechnetate rapidly (> 95% in the first hour), a rate similar to that for the sulfide-free, nZVI only system. Reduced Tc (aged for 3 months) generated in both SRB/nZVI systems was highly resistant to reoxidation. In reduced samples, Tc was found associated with solid phases containing Fe and S (D. reducens/nZVI) or Fe (nZVI only). Experiments using D. reducens without nZVI provided some additional insights. Firstly, stationary phase cultures were able to slowly reduce pertechnetate. Secondly, addition of pertechnetate at the beginning of cell growth (lag phase) resulted in a faster rate of Tc reduction, possibly indicating a direct (e.g. enzymatic) role for D. reducens in Tc reduction. Abiotic batch experiments were conducted with Na₂S as the sulfide source. Pertechnetate reduction was

Sampling method, storage and pretreatment of sediment affect AVS concentrations with consequences for bioassay responses

NARCIS (Netherlands)

Lange, de H.J.; Griethuysen, van C.; Koelmans, A.A.

2008-01-01

Sediment treatment and sediment storage may alter sediment toxicity, and consequently biotic response. Purpose of our study was to combine these three aspects (treatment-toxicity-biotic response) in one integrated approach. We used Acid Volatile Sulfide (AVS) concentrations as a proxy of the

Sex and life expectancy.

Science.gov (United States)

Seifarth, Joshua E; McGowan, Cheri L; Milne, Kevin J

2012-12-01

A sexual dimorphism in human life expectancy has existed in almost every country for as long as records have been kept. Although human life expectancy has increased each year, females still live longer, on average, than males. Undoubtedly, the reasons for the sex gap in life expectancy are multifaceted, and it has been discussed from both sociological and biological perspectives. However, even if biological factors make up only a small percentage of the determinants of the sex difference in this phenomenon, parity in average life expectancy should not be anticipated. The aim of this review is to highlight biological mechanisms that may underlie the sexual dimorphism in life expectancy. Using PubMed, ISI Web of Knowledge, and Google Scholar, as well as cited and citing reference histories of articles through August 2012, English-language articles were identified, read, and synthesized into categories that could account for biological sex differences in human life expectancy. The examination of biological mechanisms accounting for the female-based advantage in human life expectancy has been an active area of inquiry; however, it is still difficult to prove the relative importance of any 1 factor. Nonetheless, biological differences between the sexes do exist and include differences in genetic and physiological factors such as progressive skewing of X chromosome inactivation, telomere attrition, mitochondrial inheritance, hormonal and cellular responses to stress, immune function, and metabolic substrate handling among others. These factors may account for at least a part of the female advantage in human life expectancy. Despite noted gaps in sex equality, higher body fat percentages and lower physical activity levels globally at all ages, a sex-based gap in life expectancy exists in nearly every country for which data exist. There are several biological mechanisms that may contribute to explaining why females live longer than men on average, but the complexity of the

Ecological assessment of the Tajan river using feeding groups of benthic macroinvertebrates and biotic indices

Directory of Open Access Journals (Sweden)

M Sharifinia

2012-06-01

Full Text Available One of the best practical methods to understand ecological status of a water body and determine impacts of human intervention in reducing water quality is using benthic macroinvertebrates as assessment tools for monitoring their biological integrity and health. The Tajan River is one of the rivers of Caspian Southernsub-basin that drains the Caspian Sea. Macroinvertebrate samples were taken using Surber’s sampler (40 x 40 cm and 100µ mesh size in 45 day intervals with 3 replicates in each sampling site for a period of one year (May 2010 to May 2011. The collected organisms were preserved in 4% formalin solution and transferred to the laboratory for identification and counting. Six different functional feeding groups of macroinvertebrate e.g. Collector-gathering, Collector-filtering, Predator, Collector-gathering /Scraper, Predator/Collector-gathering and Scraper were determined. Feeding groups of Collector-gathering, Collector-filtering and Collector-gathering /Scraper were relatively dominant in comparison to other groups. Groups of Collector-filtering and Collector-gathering were dominant in slightly and heavily polluted stations, respectively. In this study population structure measures including abundance, EPT percent and the EPT and EPT/CHIR indics were mearsured. Species diversity, species richness were also determined using Shannon- Weiner, Margalef and Jacardindics. The minimum and maximum values of Hilsenhoff biotic index were observedin stations 1 (4.29 and 5 (5.57, respectively. Moreover, the highest and lowest values of BMWP/ASPT were observed in station 1 (4.51 and 5 (3.25, respectively. Evaluation of indicators revealed less water quality at stations 2, 3 and 5 which located at the lowermost of fish farms and effluent of factory. This reduction might be implicated to the effluents of water damps from fish farms running into the stream as diversity and total abundance (% of sociable macroinvertebrates decreased and that of

Monitoring treatment expectations in patients with an implantable cardioverter-defibrillator using the EXPECT-ICD scale

DEFF Research Database (Denmark)

Habibovic, Mirela; Pedersen, Susanne S.; van den Broek, Krista C

2014-01-01

AIMS: Patient treatment expectations may affect cardiac outcomes; however, till date, no validated instruments have been developed to monitor treatment expectations in patients with an implantable cardioverter-defibrillator (ICD). This study evaluates the predictive value of the newly developed 10...... with a two-factor model involving both negative (α = 0.84) and positive expectations (α = 0.77) with a score range of 0-20 for each factor. Negative treatment expectations were associated with higher levels of anxiety (β = 0.443; P ...-item EXPECtations Towards ICD therapy (EXPECT-ICD) in relation to anxiety, depression, and ICD related concerns 3 months post-implant.METHODS AND RESULTS: Consecutive implanted ICD patients were included as part of the WEB-based distress management programme for ICD patients (WEBCARE) trial from six...

Anomalous vacuum expectation values

International Nuclear Information System (INIS)

Suzuki, H.

1986-01-01

The anomalous vacuum expectation value is defined as the expectation value of a quantity that vanishes by means of the field equations. Although this value is expected to vanish in quantum systems, regularization in general produces a finite value of this quantity. Calculation of this anomalous vacuum expectation value can be carried out in the general framework of field theory. The result is derived by subtraction of divergences and by zeta-function regularization. Various anomalies are included in these anomalous vacuum expectation values. This method is useful for deriving not only the conformal, chiral, and gravitational anomalies but also the supercurrent anomaly. The supercurrent anomaly is obtained in the case of N = 1 supersymmetric Yang-Mills theory in four, six, and ten dimensions. The original form of the energy-momentum tensor and the supercurrent have anomalies in their conservation laws. But the modification of these quantities to be equivalent to the original one on-shell causes no anomaly in their conservation laws and gives rise to anomalous traces

Some continual integrals from gaussian forms

International Nuclear Information System (INIS)

Mazmanishvili, A.S.

1985-01-01

The result summary of continual integration of gaussian functional type is given. The summary contains 124 continual integrals which are the mathematical expectation of the corresponding gaussian form by the continuum of random trajectories of four types: real-valued Ornstein-Uhlenbeck process, Wiener process, complex-valued Ornstein-Uhlenbeck process and the stochastic harmonic one. The summary includes both the known continual integrals and the unpublished before integrals. Mathematical results of the continual integration carried in the work may be applied in the problem of the theory of stochastic process, approaching to the finding of mean from gaussian forms by measures generated by the pointed stochastic processes

Tomato NAC transcription factor SlSRN1 positively regulates defense response against biotic stress but negatively regulates abiotic stress response.

Directory of Open Access Journals (Sweden)

Bo Liu

Full Text Available Biotic and abiotic stresses are major unfavorable factors that affect crop productivity worldwide. NAC proteins comprise a large family of transcription factors that play important roles in plant growth and development as well as in responses to biotic and abiotic stresses. In a virus-induced gene silencing-based screening to identify genes that are involved in defense response against Botrytis cinerea, we identified a tomato NAC gene SlSRN1 (Solanum lycopersicum Stress-related NAC1. SlSRN1 is a plasma membrane-localized protein with transactivation activity in yeast. Expression of SlSRN1 was significantly induced by infection with B. cinerea or Pseudomonas syringae pv. tomato (Pst DC3000, leading to 6-8 folds higher than that in the mock-inoculated plants. Expression of SlSRN1 was also induced by salicylic acid, jasmonic acid and 1-amino cyclopropane-1-carboxylic acid and by drought stress. Silencing of SlSRN1 resulted in increased severity of diseases caused by B. cinerea and Pst DC3000. However, silencing of SlSRN1 resulted in increased tolerance against oxidative and drought stresses. Furthermore, silencing of SlSRN1 accelerated accumulation of reactive oxygen species but attenuated expression of defense genes after infection by B. cinerea. Our results demonstrate that SlSRN1 is a positive regulator of defense response against B. cinerea and Pst DC3000 but is a negative regulator for oxidative and drought stress response in tomato.

Expression of an engineered heterologous antimicrobial peptide in potato alters plant development and mitigates normal abiotic and biotic responses.

Directory of Open Access Journals (Sweden)

Ravinder K Goyal

Full Text Available Antimicrobial cationic peptides (AMPs are ubiquitous small proteins used by living cells to defend against a wide spectrum of pathogens. Their amphipathic property helps their interaction with negatively charged cellular membrane of the pathogen causing cell lysis and death. AMPs also modulate signaling pathway(s and cellular processes in animal models; however, little is known of cellular processes other than the pathogen-lysis phenomenon modulated by AMPs in plants. An engineered heterologous AMP, msrA3, expressed in potato was previously shown to cause resistance of the transgenic plants against selected fungal and bacterial pathogens. These lines together with the wild type were studied for growth habits, and for inducible defense responses during challenge with biotic (necrotroph Fusarium solani and abiotic stressors (dark-induced senescence, wounding and temperature stress. msrA3-expression not only conferred protection against F. solani but also delayed development of floral buds and prolonged vegetative phase. Analysis of select gene transcript profiles showed that the transgenic potato plants were suppressed in the hypersensitive (HR and reactive oxygen species (ROS responses to both biotic and abiotic stressors. Also, the transgenic leaves accumulated lesser amounts of the defense hormone jasmonic acid upon wounding with only a slight change in salicylic acid as compared to the wild type. Thus, normal host defense responses to the pathogen and abiotic stressors were mitigated by msrA3 expression suggesting MSRA3 regulates a common step(s of these response pathways. The stemming of the pathogen growth and mitigating stress response pathways likely contributes to resource reallocation for higher tuber yield.

Persistent Organic Pollutants in Biotic and Abiotic Components of Antarctic Pristine Environment

Science.gov (United States)

Bhardwaj, Laxmikant; Chauhan, Abhishek; Ranjan, Anuj; Jindal, Tanu

2018-05-01

Over the past decades, research in Antarctica has built a new understanding of Antarctica, its past, present and future. Human activities and long-range pollutants are increasing on the Antarctic continent. Research on persistent organic pollutants (POPs) has been carried out internationally by several countries having their permanent research stations to explain the impact of an ever increasing range of POPs in Antarctic ecosystem. POPs have been detected in Antarctica despite its geographical isolation and almost complete absence of human settlements. The presence of POPs in different abiotic (atmosphere, water bodies, sediments, soil, sea ice) and biotic components (mosses, lichens, krill, penguins, skua, etc.) in Antarctica has been studied and documented around for decades and has either been banned or strictly regulated but is still found in the environment. This review focuses on recent research pertaining to sources and occurrence of POPs in Antarctic lake water, soil, sediment, lichen, mosses and other Antarctic marine community. This review also proposes to summarize the current state of research on POPs in Antarctica environment and draw the earliest conclusions on possible significance of POPs in Antarctica based on presently available information from related Antarctic environment.

Response Expectancy and the Placebo Effect.

Science.gov (United States)

Kirsch, Irving

2018-01-01

In this chapter, I review basic tenets of response expectancy theory (Kirsch, 1985), beginning with the important distinction between response expectancies and stimulus expectancies. Although both can affect experience, the effects of response expectancies are stronger and more resistant to extinction than those of stimulus expectancies. Further, response expectancies are especially important to understanding placebo effects. The response expectancy framework is consistent with and has been amplified by the Bayesian model of predictive coding. Clinical implications of these phenomena are exemplified. © 2018 Elsevier Inc. All rights reserved.

Specialization of mutualistic interaction networks decreases toward tropical latitudes

DEFF Research Database (Denmark)

Schleuning, M.; Fründ, J.; Klein, A.-M.

2012-01-01

that current conditions have a stronger effect on biotic specialization than historical community stability. Biotic specialization decreased with increasing local and regional plant diversity. This suggests that high specialization of mutualistic interactions is a response of pollinators and seed dispersers......] or differences in plant diversity [10, 11]. Thus, the direction of the latitudinal specialization gradient remains contentious. With an unprecedented global data set, we investigated how biotic specialization between plants and animal pollinators or seed dispersers is associated with latitude, past...... and contemporary climate, and plant diversity. We show that in contrast to expectation, biotic specialization of mutualistic networks is significantly lower at tropical than at temperate latitudes. Specialization was more closely related to contemporary climate than to past climate stability, suggesting...

Accounting for user expectations in the valuation of reliable irrigation water access in the Ethiopian highlands

DEFF Research Database (Denmark)

Kassahun, Habtamu Tilahun; Nicholson, Charles F.; Jacobsen, Jette Bredahl

2016-01-01

We estimate the willingness-to-pay (WTP) for reliable access to irrigation water for a sample of farmers in a watershed of the Ethiopian highlands who do not have prior experience with irrigation. To address the lack of previous irrigation experience, we account for underlying expectations...... of future irrigation productivity using an Integrated Choice and Latent Variable (ICLV) econometric model. We then compare the ICLV estimates with alternative models that do not account for expectations regarding productivity increases with irrigation. Our results indicate that both the ICLV and alternative...

Expectations and disappointments of industrial innovations

CERN Document Server

Halevi, Gideon

2017-01-01

The Integrated Manufacturing System (IMS), Group Technology, Numerical Control, and Computer Aided Design (CAD) were four outstanding innovations that were one-time milestones of scientific industrial management. This book describes the expectations and disappointments of the common pitfalls of these ingenious ideas, which leads to understanding of their gradual disappearing, and proposes a way to restore these methods for long term utility and value. The first three innovations dominated the industry till the mid-1970s. Surprisingly, the reason for them being replaced is the same: research of the “routine” was misleading regardless of its ingenuity. In the fourth case, CAD does not support CAPP (Computer Aided Process Planning) and thus Numerical Control could no longer support developments of a system such as a flexible and automated factory. However, they incorporate many features in a specific resource instead within a manufacturing system. CAD technology and machining centers remain remarkable as a s...

Integrity at CERN

CERN Document Server

Department, HR

2015-01-01

In the fulfillment of its mission, CERN relies upon the trust and material support of its Member States and partners, and is committed to exercising exemplary stewardship of the resources with which it is entrusted. Accordingly, CERN expects the highest level of integrity from all its contributors (whether members of the personnel, consultants, contractors working on site, or persons engaged in any other capacity at or on behalf of CERN). Integrity is a core value of CERN, defined in the Code of Conduct as “behaving ethically, with intellectual honesty and being accountable for one’s own actions”.

Choosing the Right Integrator for Your Building Automation Project.

Science.gov (United States)

Podgorski, Will

2002-01-01

Examines the prevailing definitions and responsibilities of product, network, and system integrators for building automation systems; offers a novel approach to system integration; and sets realistic expectations for the owner in terms of benefits, outcomes, and overall values. (EV)

Performance appraisal of expectations

Directory of Open Access Journals (Sweden)

Russkikh G.A.

2016-11-01

Full Text Available this article provides basic concepts for teachers to estimate and reach planned students’ expectations, describes functions and elements of expectations; nature of external and internal estimate, technology to estimate the results, gives recommendations how to create diagnostic assignments.

Expected Classification Accuracy

Directory of Open Access Journals (Sweden)

Lawrence M. Rudner

2005-08-01

Full Text Available Every time we make a classification based on a test score, we should expect some number..of misclassifications. Some examinees whose true ability is within a score range will have..observed scores outside of that range. A procedure for providing a classification table of..true and expected scores is developed for polytomously scored items under item response..theory and applied to state assessment data. A simplified procedure for estimating the..table entries is also presented.

Biotic and abiotic controls on the distribution of tropical forest aboveground biomass

Science.gov (United States)

Saatchi, S. S.; Schimel, D.; Keller, M. M.; Chambers, J. Q.; Dubayah, R.; Duffy, P.; Yu, Y.; Robinson, C. M.; Chowdhury, D.; Yang, Y.

2013-12-01

AUTHOR: Sassan Saatchi1,2, Yan Yang2, Diya Chowdhury2, Yifan Yu2, Chelsea Robinson2, David Schimel1, Paul Duffy3, Michael Keller4, Ralph Dubayah5, Jeffery Chambers6 1. Jet Propulsion Laboratory, California Institute of Technology, Pasadena, CA USA 2. Institute of Environment and Sustainability, University of California, Los Angeles, CA, USA 3. Neptune and Company, Inc. Denver, CO, USA 4. International Institute of Tropical Forestry & International Programs, USDA Forest Service, Campinas, Brazil 5. Department of Geography, University of Maryland, College Park, MD, USA 6. Department of Geography, University of California, Berkeley, CA, USA ABSTRACT BODY: In recent years, climate change policies and scientific research created a widespread interest in quantify the carbon stock and changes of global tropical forests extending from forest patches to national and regional scales. Using a combination of inventory data from field plots and forest structure from spaceborne Lidar data, we examine the main controls on the distribution of tropical forest biomass. Here, we concentrate on environmental and landscape variables (precipitation, temperature, topography, and soil), and biotic variables such as functional traits (density of large trees, and wood specific gravity). The analysis is performed using global bioclimatic variables for precipitation and temperature, SRTM data for topographical variables (elevation and ruggedness), and global harmonized soil data for soil type and texture. For biotic variables, we use the GLAS Lidar data to quantify the distribution of large trees, a combined field and remote sensing data for distribution of tree wood specific gravity. The results show that climate variables such as precipitation of dry season can explain the heterogeneity of forest biomass over the landscape but cannot predict the biomass variability significantly and particularly for high biomass forests. Topography such as elevation and ruggedness along with temperature can

Spiking the expectancy profiles

DEFF Research Database (Denmark)

Hansen, Niels Chr.; Loui, Psyche; Vuust, Peter

Melodic expectations are generated with different degrees of certainty. Given distributions of expectedness ratings for multiple continuations of each context, as obtained with the probe-tone paradigm, this certainty can be quantified in terms of Shannon entropy. Because expectations arise from s...

Information Integration in Risky Choice: Identification and Stability

OpenAIRE

Stewart, Neil

2011-01-01

How is information integrated across the\\ud attributes of an option when making risky\\ud choices? In most descriptive models of\\ud decision under risk, information about\\ud risk, and reward is combined multiplicatively\\ud (e.g., expected value; expected utility\\ud theory, Bernouli, 1738/1954; subjective\\ud expected utility theory, Savage, 1954;\\ud Edwards, 1955; prospect theory, Kahneman\\ud and Tversky, 1979; rank-dependent utility,\\ud Quiggin, 1993; decision field theory,\\ud Busemeyer and To...

Validating Acquisition IS Integration Readiness with Drills

DEFF Research Database (Denmark)

Wynne, Peter J.

2017-01-01

To companies, mergers and acquisitions are important strategic tools, yet they often fail to deliver their expected value. Studies have shown the integration of information systems is a significant roadblock to the realisation of acquisition benefits, and for an IT department to be ready......), to understand how an IT department can use them to validate their integration plans. The paper presents a case study of two drills used to validate an IT department’s readiness to carry out acquisition IS integration, and suggests seven acquisition IS integration drill characteristics others could utilise when...

Modifying alcohol expectancies of Hispanic children: examining the effects of expectancy-targeted, developmentally congruous prevention videos.

Science.gov (United States)

Weinstein, Allison; Lisman, Stephen A; Johnson, Matthew D

2015-03-01

Children's expectations about the effects of alcohol consumption are known to predict the amount of alcohol they consume as adults. Previous research has used videotaped interventions to modify children's alcohol expectancies and found that puppet actors had the expected effect of decreasing children's positive alcohol expectancies, whereas adult actors did not. The current study sought to enhance the methods and outcomes of previous research by developing brief prevention videos that focus on pre-selected negative and sedating alcohol expectancies and include youth actors and age-relevant scenarios. Using a 2 × 2 factorial design (actor's age [youth or adult] × scenario relevance [youth or adult]), we examined the alcohol expectancies of 183 Hispanic third-, fourth-, and fifth-grade students (50% girls) in a public school setting. Expectancies were assessed before, immediately following the intervention, and 1 month later. The intervention consisted of four 8-minute videos based on beliefs associated with expectancies related to low alcohol consumption and a control group video about school bus safety. Positive alcohol expectancies were significantly lower directly after the intervention than at baseline. At 1-month follow-up, this effect decreased but was still significant. The current study adds to existing findings that expectancies can be modified in children, using interventions that are extremely brief, low-cost, and linked to research in children's cognitive and social development. In addition, it appears that children of different ages and genders respond differently to varying components of prevention media.

Neural correlates of rhythmic expectancy

Directory of Open Access Journals (Sweden)

Theodore P. Zanto

2006-01-01

Full Text Available Temporal expectancy is thought to play a fundamental role in the perception of rhythm. This review summarizes recent studies that investigated rhythmic expectancy by recording neuroelectric activity with high temporal resolution during the presentation of rhythmic patterns. Prior event-related brain potential (ERP studies have uncovered auditory evoked responses that reflect detection of onsets, offsets, sustains,and abrupt changes in acoustic properties such as frequency, intensity, and spectrum, in addition to indexing higher-order processes such as auditory sensory memory and the violation of expectancy. In our studies of rhythmic expectancy, we measured emitted responses - a type of ERP that occurs when an expected event is omitted from a regular series of stimulus events - in simple rhythms with temporal structures typical of music. Our observations suggest that middle-latency gamma band (20-60 Hz activity (GBA plays an essential role in auditory rhythm processing. Evoked (phase-locked GBA occurs in the presence of physically presented auditory events and reflects the degree of accent. Induced (non-phase-locked GBA reflects temporally precise expectancies for strongly and weakly accented events in sound patterns. Thus far, these findings support theories of rhythm perception that posit temporal expectancies generated by active neural processes.

Subjective life expectancy and actual mortality: results of a 10‑year panel study among older workers

NARCIS (Netherlands)

van Solinge, H.; Henkens, K.

2017-01-01

This research examined the judgemental process underlying subjective life expectancy (SLE) and the predictive value of SLE on actual mortality in older adults in the Netherlands. We integrated theoretical insights from life satisfaction research with existing models of SLE. Our model differentiates

Feeding in deep-sea demosponges: Influence of abiotic and biotic factors

Science.gov (United States)

Robertson, Leah M.; Hamel, Jean-François; Mercier, Annie

2017-09-01

In shallow benthic communities, sponges are widely recognized for their ability to contribute to food webs by cycling nutrients and mediating carbon fluxes through filter feeding. In comparison, little is known about filter feeding in deep-sea species and how it may be modulated by environmental conditions. Here, a rare opportunity to maintain live healthy deep-sea sponges for an extended period led to a preliminary experimental study of their feeding metrics. This work focused on demosponges collected from the continental slope of eastern Canada at 1000 m depth. Filtration rates (as clearance of phytoplankton cells) at holding temperature (6 °C) were positively correlated with food particle concentration, ranging on average from 18.8 to 160.6 cells ml-1 h-1 at nominal concentrations of 10,000-40,000 cells ml-1. Cell clearance was not significantly affected by decreasing seawater temperature, from 6 °C to 3 °C or 0 °C, although two of the sponges showed decreased filtration rates. Low pH ( 7.5) and the presence of a predatory sea star markedly depressed or inhibited feeding activity in all sponges tested. While performed under laboratory conditions on a limited number of specimens, this work highlights the possible sensitivity of deep-sea demosponges to various types and levels of biotic and abiotic factors, inferring a consequent vulnerability to natural and anthropogenic disturbances.

A WRKY transcription factor from Withania somnifera regulates triterpenoid withanolide accumulation and biotic stress tolerance through modulation of phytosterol and defense pathways.

Science.gov (United States)

Singh, Anup Kumar; Kumar, Sarma Rajeev; Dwivedi, Varun; Rai, Avanish; Pal, Shaifali; Shasany, Ajit K; Nagegowda, Dinesh A

2017-08-01

Withania somnifera produces pharmacologically important triterpenoid withanolides that are derived via phytosterol pathway; however, their biosynthesis and regulation remain to be elucidated. A jasmonate- and salicin-inducible WRKY transcription factor from W. somnifera (WsWRKY1) exhibiting correlation with withaferin A accumulation was functionally characterized employing virus-induced gene silencing and overexpression studies combined with transcript and metabolite analyses, and chromatin immunoprecipitation assay. WsWRKY1 silencing resulted in stunted plant growth, reduced transcripts of phytosterol pathway genes with corresponding reduction in phytosterols and withanolides in W. somnifera. Its overexpression elevated the biosynthesis of triterpenoids in W. somnifera (phytosterols and withanolides), as well as tobacco and tomato (phytosterols). Moreover, WsWRKY1 binds to W-box sequences in promoters of W. somnifera genes encoding squalene synthase and squalene epoxidase, indicating its direct regulation of triterpenoid pathway. Furthermore, while WsWRKY1 silencing in W. somnifera compromised the tolerance to bacterial growth, fungal infection, and insect feeding, its overexpression in tobacco led to improved biotic stress tolerance. Together these findings demonstrate that WsWRKY1 has a positive regulatory role on phytosterol and withanolides biosynthesis, and defense against biotic stress, highlighting its importance as a metabolic engineering tool for simultaneous improvement of triterpenoid biosynthesis and plant defense. © 2017 The Authors. New Phytologist © 2017 New Phytologist Trust.

Citizen Expectations and Satisfaction Over Time

DEFF Research Database (Denmark)

Hjortskov, Morten

2018-01-01

Expectations are thought to affect how citizens form their attitudes and behavior toward public services. Such attitudes may include citizen satisfaction, where expectations play a fundamental role, and relevant behaviors include choice of services and the decision to voice opinions about them....... However, there are few investigations into what drives citizen expectations and even fewer that consider these relationships across time. This article tests whether prior expectations, perceived performance, and citizen satisfaction influence future expectations, using a unique dataset that follows...... individual citizens across two subsequent school satisfaction surveys from 2011 and 2013. The results show that prior expectations have a large and consistent influence on future expectations, as predicted by the literature, whereas the influence from prior perceived performance seems less consistent. Prior...

An integrated approach to the assessment of the eastern Gulf of Finland health: A case study of coastal habitats

Science.gov (United States)

Berezina, Nadezhda A.; Gubelit, Yulia I.; Polyak, Yulia M.; Sharov, Andrey N.; Kudryavtseva, Valentina A.; Lubimtsev, Vasily A.; Petukhov, Vasily A.; Shigaeva, Tatyana D.

2017-07-01

Eutrophication and chemical pollution are typical threats to the ecosystem of the Gulf of Finland. This paper aims to make a comprehensive assessment of the environmental status of coastal habitats in the easternmost Gulf of Finland (Neva River estuary) by using different physical, chemical and biotic variables to find cost-effective indicators for further monitoring. During summers of 2014 and 2015 we measured water salinity, phosphorus (eutrophication marker), biomass of harmful filamentous macroalgae (coastline hypoxia inductor), sediment hazardous substances (trace metals, polycyclic aromatic hydrocarbons) and other concomitant characters at 12 sites in the gulf. Also, we analyzed responses of the phytoplankton and benthic organisms, including metal-tolerant and hydrocarbon-oxidizing bacteria, meio- and macrofauna, to these factors. We compared the indicative sensitivity and efficiency of several well-known biotic indices and methods, including a Saprobity system (basing on phytoplankton), Raffaelli and Mason index (meiobenthos), and two macrobenthic derived indices (Goodnight-Whitley Index and Benthic Quality Index). Also, we applied a new index - the embryo malformation frequency in benthic amphipods. To estimate the level of bottom hypoxia induced by the macroalgae blooms, we measured the algal cover and thickness of the algal mats. To verify our assessment, we tested correlations between all used variables. Biotic communities of these areas are subjected to high phosphorus and macroalgae blooms, toxic pollution, water salinity and other factors. We concluded that environmental state of coastal habitats at several southern sites (in Koporskaya Bay and near the developing port Bronka) and near port Primorsk in the north was bad, while the state of the rest of sites was moderate or good. The integrated approach for the assessment may be recommended for monitoring programs as an important tool for studying human-mediated and other effects on brackishwater

Exact finite volume expectation values of \\overline{Ψ}Ψ in the massive Thirring model from light-cone lattice correlators

Science.gov (United States)

Hegedűs, Árpád

2018-03-01

In this paper, using the light-cone lattice regularization, we compute the finite volume expectation values of the composite operator \\overline{Ψ}Ψ between pure fermion states in the Massive Thirring Model. In the light-cone regularized picture, this expectation value is related to 2-point functions of lattice spin operators being located at neighboring sites of the lattice. The operator \\overline{Ψ}Ψ is proportional to the trace of the stress-energy tensor. This is why the continuum finite volume expectation values can be computed also from the set of non-linear integral equations (NLIE) governing the finite volume spectrum of the theory. Our results for the expectation values coming from the computation of lattice correlators agree with those of the NLIE computations. Previous conjectures for the LeClair-Mussardo-type series representation of the expectation values are also checked.

Effects of Communication Expectancies, Actual Communication, and Expectancy Disconfirmation on Evaluations of Communicators and Their Communication Behavior.

Science.gov (United States)

Burgoon, Judee K.; Le Poire, Beth A.

1993-01-01

Investigates the perseverance of preinteraction expectancies in the face of actual communication behavior, the separate effects of personal attribute and communication expectancies, and the role of expectancy confirmation or disconfirmation on postinteraction evaluations. Confirms the validity of expectancy violations theory. (SR)

Technology Integration Support Levels for In-Service Teachers

Science.gov (United States)

Williams, Mable Evans

2017-01-01

In-service teachers across the globe are expected to integrate technology in their respective instructional content area. The purpose of this qualitative study was to explore the perceptions of in-service teachers concerning building-level support for technology integration. Participants in the study were asked to participate in semi-structured…

Integrating succession and community assembly perspectives [version 1; referees: 2 approved

Directory of Open Access Journals (Sweden)

Cynthia Chang

2016-09-01

Full Text Available Succession and community assembly research overlap in many respects, such as through their focus on how ecological processes like dispersal, environmental filters, and biotic interactions influence community structure. Indeed, many recent advances have been made by successional studies that draw on modern analytical techniques introduced by contemporary community assembly studies. However, community assembly studies generally lack a temporal perspective, both on how the forces structuring communities might change over time and on how historical contingency (e.g. priority effects and legacy effects and complex transitions (e.g. threshold effects might alter community trajectories. We believe a full understanding of the complex interacting processes that shape community dynamics across large temporal scales can best be achieved by combining concepts, tools, and study systems into an integrated conceptual framework that draws upon both succession and community assembly theory.

Mortality of the defoliator Euselasia eucerus (Lepidoptera: Riodinidae by biotic factors in an Eucalyptus urophylla plantation in Minas Gerais State, Brazil

Directory of Open Access Journals (Sweden)

José C. Zanuncio

2009-03-01

Full Text Available Euselasia eucerus (Hewitson, 1872 (Lepidoptera: Riodinidae is a Brazilian native species commonly found in Eucalyptus plantations. Biotic mortality factors of this defoliator were studied in a Eucalyptus urophylla plantation in Minas Gerais State, Brazil aiming to identify natural enemies and their impact on this insect. Euselasia eucerus had biotic mortality factors during all development stages. The most important were Trichogramma maxacalii Voegelé and Pointel, 1980 (Hymenoptera: Trichogrammatidae during egg stage (48.9%, a tachinid fly (Diptera: Tachinidae during larval stages (10% and Itoplectis sp. (Hymenoptera: Ichneumonidae during pupal stage (52.2%. The parasitism rate was higher in the basal part of the plant canopy (37.8%.Euselasia eucerus (Hewitson, 1872 (Lepidoptera: Riodinidae é uma espécie brasileira nativa, comumente encontrada em plantios de Eucalyptus. Um estudo da mortalidade por fatores bióticos desse desfolhador foi feito em um plantio de Eucalyptus urophylla no Estado de Minas Gerais, Brasil, com o objetivo de identificar os inimigos naturais e seu impacto sobre esse lepidóptero. Euselasia eucerus possui fatores bióticos de mortalidade durante todas as suas fases de desenvolvimento. Os mais importantes foram Trichogramma maxacalii Voegelé e Pointel, 1980 (Hymenoptera: Trichogrammatidae durante a fase de ovo (48,9%, um Diptera: Tachinidae durante a fase de larva (10% e Itoplectis sp. (Hymenoptera: Ichneumonidae durante a fase pupal (52,2%. A taxa de parasitismo foi mais elevada na parte basal de plantas de eucalipto (37,8%.

TH-E-201-00: Teaching Radiology Residents: What, How, and Expectation

Energy Technology Data Exchange (ETDEWEB)

NONE

2016-06-15

The ABR Core Examination stresses integrating physics into real-world clinical practice and, accordingly, has shifted its focus from passive recall of facts to active application of physics principles. Physics education of radiology residents poses a challenge. The traditional method of didactic lectures alone is insufficient, yet it is difficult to incorporate physics teaching consistently into clinical rotations due to time constraints. Faced with this challenge, diagnostic medical physicists who teach radiology residents, have been thinking about how to adapt their teaching to the new paradigm, what to teach and meet expectation of the radiology resident and the radiology residency program. The proposed lecture attempts to discuss above questions. Newly developed diagnostic radiology residents physics curriculum by the AAPM Imaging Physics Curricula Subcommittee will be reviewed. Initial experience on hands-on physics teaching will be discussed. Radiology resident who will have taken the BAR Core Examination will share the expectation of physics teaching from a resident perspective. The lecture will help develop robust educational approaches to prepare radiology residents for safer and more effective lifelong practice. Learning Objectives: Learn updated physics requirements for radiology residents Pursue effective approaches to teach physics to radiology residents Learn expectation of physics teaching from resident perspective J. Zhang, This topic is partially supported by RSNA Education Scholar Grant.

TH-E-201-00: Teaching Radiology Residents: What, How, and Expectation

International Nuclear Information System (INIS)

2016-01-01

The ABR Core Examination stresses integrating physics into real-world clinical practice and, accordingly, has shifted its focus from passive recall of facts to active application of physics principles. Physics education of radiology residents poses a challenge. The traditional method of didactic lectures alone is insufficient, yet it is difficult to incorporate physics teaching consistently into clinical rotations due to time constraints. Faced with this challenge, diagnostic medical physicists who teach radiology residents, have been thinking about how to adapt their teaching to the new paradigm, what to teach and meet expectation of the radiology resident and the radiology residency program. The proposed lecture attempts to discuss above questions. Newly developed diagnostic radiology residents physics curriculum by the AAPM Imaging Physics Curricula Subcommittee will be reviewed. Initial experience on hands-on physics teaching will be discussed. Radiology resident who will have taken the BAR Core Examination will share the expectation of physics teaching from a resident perspective. The lecture will help develop robust educational approaches to prepare radiology residents for safer and more effective lifelong practice. Learning Objectives: Learn updated physics requirements for radiology residents Pursue effective approaches to teach physics to radiology residents Learn expectation of physics teaching from resident perspective J. Zhang, This topic is partially supported by RSNA Education Scholar Grant

Benthic indicators to use in Ecological Quality classification of Mediterranean soft bottom marine ecosystems, including a new Biotic Index

Directory of Open Access Journals (Sweden)

N. SIMBOURA

2002-12-01

Full Text Available A general scheme for approaching the objective of Ecological Quality Status (EcoQ classification of zoobenthic marine ecosystems is presented. A system based on soft bottom benthic indicator species and related habitat types is suggested to be used for testing the typological definition of a given water body in the Mediterranean. Benthic indices including the Shannon-Wiener diversity index and the species richness are re-evaluated for use in classification. Ranges of values and of ecological quality categories are given for the diversity and species richness in different habitat types. A new biotic index (BENTIX is proposed based on the relative percentages of three ecological groups of species grouped according to their sensitivity or tolerance to disturbance factors and weighted proportionately to obtain a formula rendering a five step numerical scale of ecological quality classification. Its advantage against former biotic indices lies in the fact that it reduces the number of the ecological groups involved which makes it simpler and easier in its use. The Bentix index proposed is tested and validated with data from Greek and western Mediterranean ecosystems and examples are presented. Indicator species associated with specific habitat types and pollution indicator species, scored according to their degree of tolerance to pollution, are listed in a table. The Bentix index is compared and evaluated against the indices of diversity and species richness for use in classification. The advantages of the BENTIX index as a classification tool for ECoQ include independence from habitat type, sample size and taxonomic effort, high discriminative power and simplicity in its use which make it a robust, simple and effective tool for application in the Mediterranean Sea.

Analysis of benthic macroinvertebrates and biotic indices to evaluate water quality in rivers impacted by mining activities in northern Chile

Directory of Open Access Journals (Sweden)

Alvial I.E.

2013-02-01

Full Text Available Catchments in the semiarid regions are especially susceptible to environmental perturbation associated with water scarcity, hydrological variations and overuse by anthropogenic activities. Using multivariate analysis to relate environmental and biological data, and diversity and biotic indices (ChBMWP, ChIBF, we analyzed the macroinvertebrate composition of 12 rivers of the semiarid region of northern Chile. A non-metric multidimensional scaling for macroinvertebrate taxa and a principal component analysis for environmental variables strongly separated upstream sites (e.g. Vacas Heladas and Malo Rivers, which presented low pH and high dissolved metal concentrations, from other sites. Effectively, CCA showed that metals and low pH, associated with the altitudinal gradient, determined the distributional patterns of macroinvertebrates in the Elqui catchment. The causes of these particular conditions could be related to geological processes and human impact. The biotic indices applied to the sampling sites corroborated and reflected these characteristics, with La Laguna and Turbio Rivers showing a diverse macroinvertebrate community and moderate to good water quality, and the Claro River showing favorable conditions for the development of aquatic biota, indicating its better quality relative to other stations. To the middle and low part of the basin, a change in the composition of the community was observed, with species that suggest an impact by an increase in organic matter, due to agricultural activities and urban settlements concentrated in this area. Our results suggest that macroinvertebrate taxa in northern Chile may be exceptional species, adapted to unfavorable geochemical conditions, and emphasize the need for protection of the semiarid basins of the region.

Memory for expectation-violating concepts

DEFF Research Database (Denmark)

Porubanova, Michaela; Shaw, Daniel; McKay, Ryan

2014-01-01

Previous research has shown that ideas which violate our expectations, such as schema-inconsistent concepts, enjoy privileged status in terms of memorability. In our study, memory for concepts that violate cultural (cultural schema-level) expectations (e.g., ‘‘illiterate teacher’’, ‘‘wooden bottle...... expectations and with intuitive concepts (e.g., ‘‘galloping pony’’, ‘‘drying orchid’’, or ‘‘convertible car’’), in both immediate recall, and delayed recognition tests. Importantly, concepts related to agents showed a memory advantage over concepts not pertaining to agents, but this was true only...... for expectation-violating concepts. Our results imply that intuitive, everyday concepts are equally attractive and memorable regardless of the presence or absence of agents. However, concepts that violate our expectations (cultural-schema or domain-level) are more memorable when pertaining to agents (humans...

An integrated analysis of micro- and macro-habitat features as a tool to detect weather-driven constraints: A case study with cavity nesters.

Directory of Open Access Journals (Sweden)

D Campobello

Full Text Available The effects of climate change on animal populations may be shaped by habitat characteristics at both micro- and macro-habitat level, however, empirical studies integrating these two scales of observation are lacking. As analyses of the effects of climate change commonly rely on data from a much larger scale than the microhabitat level organisms are affected at, this mismatch risks hampering progress in developing understanding of the details of the ecological and evolutionary responses of organisms and, ultimately, effective actions to preserve their populations. Cavity nesters, often with a conservation status of concern, are an ideal model because the cavity is a microenvironment potentially different from the macroenvironment but nonetheless inevitably interacting with it. The lesser kestrel (Falco naumanni is a cavity nester which was until recently classified by as Vulnerable species. Since 2004, for nine years, we collected detailed biotic and abiotic data at both micro- and macro-scales of observation in a kestrel population breeding in the Gela Plain (Italy, a Mediterranean area where high temperatures may reach lethal values for the nest content. We show that macroclimatic features needed to be integrated with both abiotic and biotic factors recorded at a microscale before reliably predicting nest temperatures. Among the nest types used by lesser kestrels, we detected a preferential occupation of the cooler nest types, roof tiles, by early breeders whereas, paradoxically, late breeders nesting with hotter temperatures occupied the overheated nest holes. Not consistent with such a suggested nest selection, the coolest nest type did not host a higher reproductive success than the overheated nests. We discussed our findings in the light of cavity temperatures and nest types deployed within conservation actions assessed by integrating selected factors at different observation scales.

An integrated analysis of micro- and macro-habitat features as a tool to detect weather-driven constraints: A case study with cavity nesters.

Science.gov (United States)

Campobello, D; Lindström, J; Di Maggio, R; Sarà, M

2017-01-01

The effects of climate change on animal populations may be shaped by habitat characteristics at both micro- and macro-habitat level, however, empirical studies integrating these two scales of observation are lacking. As analyses of the effects of climate change commonly rely on data from a much larger scale than the microhabitat level organisms are affected at, this mismatch risks hampering progress in developing understanding of the details of the ecological and evolutionary responses of organisms and, ultimately, effective actions to preserve their populations. Cavity nesters, often with a conservation status of concern, are an ideal model because the cavity is a microenvironment potentially different from the macroenvironment but nonetheless inevitably interacting with it. The lesser kestrel (Falco naumanni) is a cavity nester which was until recently classified by as Vulnerable species. Since 2004, for nine years, we collected detailed biotic and abiotic data at both micro- and macro-scales of observation in a kestrel population breeding in the Gela Plain (Italy), a Mediterranean area where high temperatures may reach lethal values for the nest content. We show that macroclimatic features needed to be integrated with both abiotic and biotic factors recorded at a microscale before reliably predicting nest temperatures. Among the nest types used by lesser kestrels, we detected a preferential occupation of the cooler nest types, roof tiles, by early breeders whereas, paradoxically, late breeders nesting with hotter temperatures occupied the overheated nest holes. Not consistent with such a suggested nest selection, the coolest nest type did not host a higher reproductive success than the overheated nests. We discussed our findings in the light of cavity temperatures and nest types deployed within conservation actions assessed by integrating selected factors at different observation scales.

Persistent social inequality in life expectancy and disability-free life expectancy

DEFF Research Database (Denmark)

Brønnum-Hansen, Henrik; Eriksen, Mette Lindholm; Andersen-Ranberg, Karen

2017-01-01

AIMS: The state old-age pension in Denmark increases to keep pace with the projected increase in average life expectancy (LE) without any regard to the social gap in LE and expected lifetime in good health. The purpose of this study was to compare changes in LE and disability-free life expectancy...... (DFLE) between groups of Danes with high, medium and low levels of education. METHODS: Nationwide register data on education and mortality were combined with data from the Surveys of Health, Ageing and Retirement in Europe (SHARE) surveys in 2006-2007, 2010-2011 and 2013-2014 and the DFLE by educational...... level was estimated by Sullivan's method for each of these three time points. RESULTS: Between 2006-2007 and 2013-2014, LE among 65-year-old men and women with a low educational level increased by 1.3 and 1.0 years, respectively, and by 1.4 and 1.3 years for highly educated men and women. The gap in LE...

Preservice and In-Service Teachers' Perceptions toward Technology Benefits and Integration

Science.gov (United States)

Spaulding, Michael

2013-01-01

This study examined preservice teacher attitudes toward and expected technology integration practices as compared to in-service teachers' attitudes toward and actual (self-reported) practice of technology integration. The preservice teachers revealed a greater level of confidence in their ability to integrate technology and more positive beliefs…

Performance expectation plan

Energy Technology Data Exchange (ETDEWEB)

Ray, P.E.

1998-09-04

This document outlines the significant accomplishments of fiscal year 1998 for the Tank Waste Remediation System (TWRS) Project Hanford Management Contract (PHMC) team. Opportunities for improvement to better meet some performance expectations have been identified. The PHMC has performed at an excellent level in administration of leadership, planning, and technical direction. The contractor has met and made notable improvement of attaining customer satisfaction in mission execution. This document includes the team`s recommendation that the PHMC TWRS Performance Expectation Plan evaluation rating for fiscal year 1998 be an Excellent.

Review of Variable Generation Integration Charges

Energy Technology Data Exchange (ETDEWEB)

Porter, K.; Fink, S.; Buckley, M.; Rogers, J.; Hodge, B. M.

2013-03-01

The growth of wind and solar generation in the United States, and the expectation of continued growth of these technologies, dictates that the future power system will be operated in a somewhat different manner because of increased variability and uncertainty. A small number of balancing authorities have attempted to determine an 'integration cost' to account for these changes to their current operating practices. Some balancing authorities directly charge wind and solar generators for integration charges, whereas others add integration charges to projected costs of wind and solar in integrated resource plans or in competitive solicitations for generation. This report reviews the balancing authorities that have calculated variable generation integration charges and broadly compares and contrasts the methodologies they used to determine their specific integration charges. The report also profiles each balancing authority and how they derived wind and solar integration charges.

Expectancies as core features of mental disorders.

Science.gov (United States)

Rief, Winfried; Glombiewski, Julia A; Gollwitzer, Mario; Schubö, Anna; Schwarting, Rainer; Thorwart, Anna

2015-09-01

Expectancies are core features of mental disorders, and change in expectations is therefore one of the core mechanisms of treatment in psychiatry. We aim to improve our understanding of expectancies by summarizing factors that contribute to their development, persistence, and modification. We pay particular attention to the issue of persistence of expectancies despite experiences that contradict them. Based on recent research findings, we propose a new model for expectation persistence and expectation change. When expectations are established, effects are evident in neural and other biological systems, for example, via anticipatory reactions, different biological reactions to expected versus unexpected stimuli, etc. Psychological 'immunization' and 'assimilation', implicit self-confirming processes, and stability of biological processes help us to better understand why expectancies persist even in the presence of expectation violations. Learning theory, attentional processes, social influences, and biological determinants contribute to the development, persistence, and modification of expectancies. Psychological interventions should focus on optimizing expectation violation to achieve optimal treatment outcome and to avoid treatment failures.

Enhancing treatment of osteoarthritis knee pain by boosting expectancy: A functional neuroimaging study

Directory of Open Access Journals (Sweden)

Jian Kong

Full Text Available Objectives: Expectation can significantly modulate pain and treatment effects. This study aims to investigate if boosting patients' expectancy can enhance the treatment of knee osteoarthritis (KOA, and its underlying brain mechanism. Methods: Seventy-four KOA patients were recruited and randomized to three groups: boosted acupuncture (with a manipulation to enhance expectation, standard acupuncture, or treatment as usual (TAU. Each patient underwent six treatments before being debriefed, and four additional treatments after being debriefed. The fMRI scans were applied during the first and sixth treatment sessions. Results: We found significantly decreased knee pain in the boosted acupuncture group compared to the standard acupuncture or TAU groups after both six and ten treatments. Resting state functional connectivity (rsFC analyses using the nucleus accumbens (NAc as the seed showed rsFC increases between the NAc and the medial prefrontal cortex (MPFC/rostral anterior cingulate cortex (rACC and dorsolateral prefrontal cortex in the boosted group as compared to the standard acupuncture group after multiple treatments. Expectancy scores after the first treatment were significantly associated with increased NAc-rACC/MPFC rsFC and decreased knee pain following treatment. Conclusions: Our study provides a novel method and mechanism for boosting the treatment of pain in patients with KOA. Our findings may shed light on enhancing outcomes of pharmacological and integrative medicines in clinical settings. Keywords: Knee osteoarthritis, Expectancy, Acupuncture, Reward, Resting state functional connectivity

1984 Biotic Studies of Yucca Mountain, Nevada Test Site, Nye County, Nevada

International Nuclear Information System (INIS)

Collins, E.; O'Farrell, T.P.

1985-02-01

A portion of Yucca Mountain on and adjacent to the US Department of Energy's Nevada Test Site, Nye County, Nevada, is being considered as a possible location for a national high-level radioactive waste repository. The geologic and environmental characteristics of the site are being investigated to determine its suitability for further characterization. Goals of biotic studies were to identify species of concern, describe major floral and faunal associations, determine exposure levels of external background radiation, and assess possible impacts of characterization and operational activities. The species composition of dominant small mammals inhabiting major vegetation associations in 1984 varied little compared with results of similar surveys conducted in 1982 and 1983. Total captures were lower and reproduction was apparently curtailed. Merriam's kangaroo rat and the long tailed pocket mouse continued to be the most abundant species. Diversity of resident species did not differ significantly between the trapping lines. The composition and relative abundance of associated species was more variable. Western harvest mice were trapped for the first time, but pinyon mice, which were present in prior years, were not trapped. Five desert tortoises were observed during surveys of possible sites for repository surface facilities. 25 refs., 4 figs., 5 tabs

Biotic and abiotic retention, recycling and remineralization of metals in the ocean

Energy Technology Data Exchange (ETDEWEB)

Boyd, Philip W.; Ellwood, Michael J.; Tagliabue, Alessandro; Twining , Benjamin S. (ANU); (Liverpool); (Tasmania); (Bigelow)

2017-03-01

Trace metals shape both the biogeochemical functioning and biological structure of oceanic provinces. Trace metal biogeochemistry has primarily focused on modes of external supply of metals from aeolian, hydrothermal, sedimentary and other sources. However, metals also undergo internal transformations such as abiotic and biotic retention, recycling and remineralization. The role of these internal transformations in metal biogeochemical cycling is now coming into focus. First, the retention of metals by biota in the surface ocean for days, weeks or months depends on taxon-specific metal requirements of phytoplankton, and on their ultimate fate: that is, viral lysis, senescence, grazing and/or export to depth. Rapid recycling of metals in the surface ocean can extend seasonal productivity by maintaining higher levels of metal bioavailability compared to the influence of external metal input alone. As metal-containing organic particles are exported from the surface ocean, different metals exhibit distinct patterns of remineralization with depth. These patterns are mediated by a wide range of physicochemical and microbial processes such as the ability of particles to sorb metals, and are influenced by the mineral and organic characteristics of sinking particles. We conclude that internal metal transformations play an essential role in controlling metal bioavailability, phytoplankton distributions and the subsurface resupply of metals.

College for some to college for all: social background, occupational expectations, and educational expectations over time.

Science.gov (United States)

Goyette, Kimberly A

2008-06-01

The educational expectations of 10th-graders have dramatically increased from 1980 to 2002. Their rise is attributable in part to the changing educational composition of students' parents and related to the educational profiles of their expected occupations. Students whose parents have gone to college are more likely to attend college themselves, and students expect occupations that are more prestigious in 2002 than in 1980. The educational requirements of particular occupation categories have risen only slightly. These analyses also reveal that educational expectations in recent cohorts are more loosely linked to social background and occupational plans than they were in 1980. The declining importance of parents' background and the decoupling of educational and occupational plans, in addition to a strong and significant effect of cohort on educational expectations, suggest that the expectation of four-year college attainment is indeed becoming the norm.

Radiation damage at LHCb, results and expectations

CERN Multimedia

Faerber, Christian

2011-01-01

The LHCb Detector is a single-arm spectrometer at the LHC designed to detect new physics through measuring CP violation and rare decays of heavy flavor mesons. The detector consists of vertex detector, tracking system, dipole magnet, 2 RICH detectors, em. calorimeter, hadron calorimeter, muon detector which all use different technologies and suffer differently from radiation damage. These radiation damage results and the investigation methods will be shown. The delivered luminosity till July 2011 was about 450 pb−1. The Vertex detector receives the highest particle flux at LHCb. The currents drawn by the silicon sensors are, as expected, increasing proportional to the integrated luminosity. The highest irradiaton regions of the n-bulk silicon sensors are observed to have recently undergone space charge sign inversion. The Silicon Trackers show increasing leakage currents comparable with earlier predictions. The electromagentic calorimeter and hadron calorimeter suffer under percent-level signal decrease whi...

Impact of Genomic Technologies on Chickpea Breeding Strategies

Directory of Open Access Journals (Sweden)

Rajeev K. Varshney

2012-08-01

Full Text Available The major abiotic and biotic stresses that adversely affect yield of chickpea (Cicer arietinum L. include drought, heat, fusarium wilt, ascochyta blight and pod borer. Excellent progress has been made in developing short-duration varieties with high resistance to fusarium wilt. The early maturity helps in escaping terminal drought and heat stresses and the adaptation of chickpea to short-season environments. Ascochyta blight continues to be a major challenge to chickpea productivity in areas where chickpea is exposed to cool and wet conditions. Limited variability for pod borer resistance has been a major bottleneck in the development of pod borer resistant cultivars. The use of genomics technologies in chickpea breeding programs has been limited, since available genomic resources were not adequate and limited polymorphism was observed in the cultivated chickpea for the available molecular markers. Remarkable progress has been made in the development of genetic and genomic resources in recent years and integration of genomic technologies in chickpea breeding has now started. Marker-assisted breeding is currently being used for improving drought tolerance and combining resistance to diseases. The integration of genomic technologies is expected to improve the precision and efficiency of chickpea breeding in the development of improved cultivars with enhanced resistance to abiotic and biotic stresses, better adaptation to existing and evolving agro-ecologies and traits preferred by farmers, industries and consumers.

The weight of the container influences expected satiety, perceived density, and subsequent expected fullness.

Science.gov (United States)

Piqueras-Fiszman, Betina; Spence, Charles

2012-04-01

We report a study designed to investigate the influence of the weight of the container on expected satiety prior to tasting the food within and on the perceived density of the food and any feelings of fullness expected to follow consumption (expected satiation). The results demonstrate that the contents of a heavier container are expected to be more satiating than when exactly the same contents are presented in a visually-identical, but physically lighter, container (even before the food has been tasted). In addition, we were able to validate a "weight-density" illusion, since the weight of the container was shown to influence the perceived density of the sample. Put simply, the heavier the container, the denser the food sample was perceived to be. Copyright © 2012 Elsevier Ltd. All rights reserved.