WorldWideScience

Sample records for biotechnology information database

  1. National Center for Biotechnology Information

    Science.gov (United States)

    ... to NCBI Sign Out NCBI National Center for Biotechnology Information Search database All Databases Assembly Biocollections BioProject ... Search Welcome to NCBI The National Center for Biotechnology Information advances science and health by providing access ...

  2. Biotechnology information service of the GDR

    International Nuclear Information System (INIS)

    Poetzsch, E.

    1990-05-01

    The paper gives a survey of the biotechnology information in the GDR and describes the establishment of the Biotechnology Information Service of the GDR (BioInfo GDR). BioInfo GDR is a referral database and is to provide information on information sources available in the GDR, and on institutions working in the various fields of biotechnology in the GDR. In addition, some general problems of the building and use of databases are discussed. (author). 8 refs

  3. Biotechnology information service of the GDR

    Energy Technology Data Exchange (ETDEWEB)

    Poetzsch, E [Academy of Sciences, Berlin (Germany). Scientific Information Center

    1990-05-01

    The paper gives a survey of the biotechnology information in the GDR and describes the establishment of the Biotechnology Information Service of the GDR (BioInfo GDR). BioInfo GDR is a referral database and is to provide information on information sources available in the GDR, and on institutions working in the various fields of biotechnology in the GDR. In addition, some general problems of the building and use of databases are discussed. (author). 8 refs.

  4. Databases on biotechnology and biosafety of GMOs.

    Science.gov (United States)

    Degrassi, Giuliano; Alexandrova, Nevena; Ripandelli, Decio

    2003-01-01

    Due to the involvement of scientific, industrial, commercial and public sectors of society, the complexity of the issues concerning the safety of genetically modified organisms (GMOs) for the environment, agriculture, and human and animal health calls for a wide coverage of information. Accordingly, development of the field of biotechnology, along with concerns related to the fate of released GMOs, has led to a rapid development of tools for disseminating such information. As a result, there is a growing number of databases aimed at collecting and storing information related to GMOs. Most of the sites deal with information on environmental releases, field trials, transgenes and related sequences, regulations and legislation, risk assessment documents, and literature. Databases are mainly established and managed by scientific, national or international authorities, and are addressed towards scientists, government officials, policy makers, consumers, farmers, environmental groups and civil society representatives. This complexity can lead to an overlapping of information. The purpose of the present review is to analyse the relevant databases currently available on the web, providing comments on their vastly different information and on the structure of the sites pertaining to different users. A preliminary overview on the development of these sites during the last decade, at both the national and international level, is also provided.

  5. Organisation of biotechnological information into knowledge.

    Science.gov (United States)

    Boh, B

    1996-09-01

    The success of biotechnological research, development and marketing depends to a large extent on the international transfer of information and on the ability to organise biotechnology information into knowledge. To increase the efficiency of information-based approaches, an information strategy has been developed and consists of the following stages: definition of the problem, its structure and sub-problems; acquisition of data by targeted processing of computer-supported bibliographic, numeric, textual and graphic databases; analysis of data and building of specialized in-house information systems; information processing for structuring data into systems, recognition of trends and patterns of knowledge, particularly by information synthesis using the concept of information density; design of research hypotheses; testing hypotheses in the laboratory and/or pilot plant; repeated evaluation and optimization of hypotheses by information methods and testing them by further laboratory work. The information approaches are illustrated by examples from the university-industry joint projects in biotechnology, biochemistry and agriculture.

  6. Biotechnology

    International Nuclear Information System (INIS)

    Lewanika, Mbikusita Mwananyanda

    2005-01-01

    The article sets out to explain in simple terms the main concepts of Biotechnology beginning with traditional biotechnology to modern biotechnology. It outlines fundamentals of Recombinant Deoxyribonucleic Acid (DNA), Genetically Modified Organisms (GMOs) and Genetic Engineering. The article offers a discussion of the benefits, disadvantages and the general public and policy concerns regarding genetically modified organisms

  7. A Proposal to Develop a Biotechnology Information Facility

    National Research Council Canada - National Science Library

    Spalding, John

    2002-01-01

    The objective of this grant was to develop facilities and information resources that support current research in biotechnology and to meet the goal of strengthening the biological science programs at HBCUs/Mls...

  8. Database of Information technology resources

    OpenAIRE

    Barzda, Erlandas

    2005-01-01

    The subject of this master work is the internet information resource database. This work also handles the problems of old information systems which do not meet the new contemporary requirements. The aim is to create internet information system, based on object-oriented technologies and tailored to computer users’ needs. The internet information database system helps computers administrators to get the all needed information about computers network elements and easy to register all changes int...

  9. Education resources of the National Center for Biotechnology Information.

    Science.gov (United States)

    Cooper, Peter S; Lipshultz, Dawn; Matten, Wayne T; McGinnis, Scott D; Pechous, Steven; Romiti, Monica L; Tao, Tao; Valjavec-Gratian, Majda; Sayers, Eric W

    2010-11-01

    The National Center for Biotechnology Information (NCBI) hosts 39 literature and molecular biology databases containing almost half a billion records. As the complexity of these data and associated resources and tools continues to expand, so does the need for educational resources to help investigators, clinicians, information specialists and the general public make use of the wealth of public data available at the NCBI. This review describes the educational resources available at NCBI via the NCBI Education page (www.ncbi.nlm.nih.gov/Education/). These resources include materials designed for new users, such as About NCBI and the NCBI Guide, as well as documentation, Frequently Asked Questions (FAQs) and writings on the NCBI Bookshelf such as the NCBI Help Manual and the NCBI Handbook. NCBI also provides teaching materials such as tutorials, problem sets and educational tools such as the Amino Acid Explorer, PSSM Viewer and Ebot. NCBI also offers training programs including the Discovery Workshops, webinars and tutorials at conferences. To help users keep up-to-date, NCBI produces the online NCBI News and offers RSS feeds and mailing lists, along with a presence on Facebook, Twitter and YouTube.

  10. Radiation safety research information database

    International Nuclear Information System (INIS)

    Yukawa, Masae; Miyamoto, Kiriko; Takeda, Hiroshi; Kuroda, Noriko; Yamamoto, Kazuhiko

    2004-01-01

    National Institute of Radiological Sciences in Japan began to construct Radiation Safety Research Information Database' in 2001. The research information database is of great service to evaluate the effects of radiation on people by estimating exposure dose by determining radiation and radioactive matters in the environment. The above database (DB) consists of seven DB such as Nirs Air Borne Dust Survey DB, Nirs Environmental Tritium Survey DB, Nirs Environmental Carbon Survey DB, Environmental Radiation Levels, Abe, Metabolic Database for Assessment of Internal Dose, Graphs of Predicted Monitoring Data, and Nirs nuclear installation environment water tritium survey DB. Outline of DB and each DB are explained. (S.Y.)

  11. Afghanistan / Pakistan Information Database

    Data.gov (United States)

    US Agency for International Development — USAID Info is a dynamic, web-based information management application designed to organize, monitor, and store OAPA Missions? implementation- and performance-level...

  12. Biotechnology awareness study, Part 1: Where scientists get their information.

    Science.gov (United States)

    Grefsheim, S; Franklin, J; Cunningham, D

    1991-01-01

    A model study, funded by the National Library of Medicine (NLM) and conducted by the Southeastern/Atlantic Regional Medical Library (RML) and the University of Maryland Health Sciences Library, attempted to assess the information needs of researchers in the developing field of biotechnology and to determine the resources available to meet those needs in major academic health sciences centers. Nine medical schools in RML Region 2 were selected to participate in a biotechnology awareness study. A survey was conducted of the nine medical school libraries to assess their support of biotechnology research. To identify the information needs of scientists engaged in biotechnology-related research at the schools, a written survey was sent to the deans of the nine institutions and selected scientists they had identified. This was followed by individual, in-depth interviews with both the deans and scientists surveyed. In general, scientists obtained information from three major sources: their own experiments, personal communication with other scientists, and textual material (print or electronic). For textual information, most study participants relied on personal journal subscriptions. Tangential journals were scanned in the department's library. Only a few of these scientists came to the health sciences library on a regular basis. Further, the study found that personal computers have had a major impact on how biotechnologists get and use information. Implications of these findings for libraries and librarians are discussed. PMID:1998818

  13. Biotechnology

    International Nuclear Information System (INIS)

    2008-01-01

    The guidelines of the Biotechnology Program are research and development aiming to develop and manufacture products of pharmaceutical interest. This program has two main research areas, namely Pituitary Hormones and Biopharmaceuticals. The first one comprises a group with a long experience on Recombinant Human Pituitary Hormone synthesis, purification and characterization. The Biopharmaceutical area is dedicated to the research of isolation, structural analysis and biological activities in different biological system of macromolecules

  14. Effect of Religious Belief on Informal Reasoning about Biotechnology Issues

    Science.gov (United States)

    Pope, Timothy; Dawson, Vaille; Koul, Rekha

    2017-01-01

    The advances of modern biotechnology provide teachers with a number of opportunities to explore socioscientific issues, and in doing so to enhance students' reasoning skills. Although some attempt has been made to understand cultural differences in students' informal reasoning across international and regional boundaries, there is limited research…

  15. Biotechnology

    International Nuclear Information System (INIS)

    2011-01-01

    The guidelines of the Biotechnology Program are research and development aiming to develop and manufacture products of pharmaceutical interest. This Program has two main research areas, namely Pituitary Hormones and Biopharmaceuticals. The first one comprises a group with a long experience on Recombinant Human Pituitary Hormone synthesis, purification and characterization. The Biopharmaceutical area is dedicated to the research of isolation, structural analysis and biological activities in different biological system of macromolecules. The Animal Laboratory Division of IPEN is responsible for the breeding and production of small laboratory animal.

  16. Nuclear technology databases and information network systems

    International Nuclear Information System (INIS)

    Iwata, Shuichi; Kikuchi, Yasuyuki; Minakuchi, Satoshi

    1993-01-01

    This paper describes the databases related to nuclear (science) technology, and information network. Following contents are collected in this paper: the database developed by JAERI, ENERGY NET, ATOM NET, NUCLEN nuclear information database, INIS, NUclear Code Information Service (NUCLIS), Social Application of Nuclear Technology Accumulation project (SANTA), Nuclear Information Database/Communication System (NICS), reactor materials database, radiation effects database, NucNet European nuclear information database, reactor dismantling database. (J.P.N.)

  17. Consumer demand for information about agricultural biotechnology

    DEFF Research Database (Denmark)

    Scholderer, Joachim; Czienskowski, Uwe

    The aim of the study was to provide a realistic assessment of (a) the amount and type of information that consumers would use in choices between second-generation novel foods and different types of competitor products, (b) the amount and type of information that consumers would access from general...... (glycoalkaloids), mutation-bred rice with lowered levels of an anti-nutrient (phytic acid), and functional food ingredients of a natural origin (phytosterols). A representative sample of 726 Danish consumers participated in a web experiment. In the first part of the experiment, information uptake in realistic...... product choice situations was monitored. Each participant completed three choice tasks, involving different categories of consumer products (basmati rice, milk, frozen sliced potatoes). Within each choice set, one product alternative was based on the second-generation novel foods used as paradigmatic...

  18. National Center for Biotechnology Information Celebrates 25th Anniversary | NIH MedlinePlus the Magazine

    Science.gov (United States)

    ... page please turn JavaScript on. National Center for Biotechnology Information Celebrates 25th Anniversary Past Issues / Winter 2014 ... Photo courtesy of NLM The National Center for Biotechnology Information (NCBI), a component of NLM, celebrated its ...

  19. Biotechnology

    International Nuclear Information System (INIS)

    2014-01-01

    The guidelines of the Biotechnology Program are research and development aiming at developing and manufacturing products of pharmaceutical interest. This Program has two main research areas, namely Pituitary Hormones and Biopharmaceuticals. The first one comprises a group with a long experience on Recombinant Human Pituitary Hormone synthesis, purification and characterization. Up to now they have worked mostly with human growth hormone (hGH), human prolactin (hPRL), human thyrotropin (hTSH), human follicle stimulating hormone (hFSH) and human luteotropin (hLH), with a particular emphasis on glycoprotein carbohydrate structures. An important research line is devoted to Growth Hormone Gene Therapy, working mostly on animal models: immunocompetent and immunodeficient-dwarf mice. For several years this development has been based on ex vivo grafting of transduced keratinocytes, while more recently very promising results have been obtained with the injections and electroporation of naked plasmid DNA. Besides research, they have also activities in the Biotechnological Production and Downstream Processing of the same recombinant hormones, which are produced in both E. coli and mammalian cells and in the development of joint-ventures with the National Industry. The biological effects of radiation on cells are also studied, specially concerning the administration of 131 I together with thyroid-stimulating hormone in thyroid cancer. The Biopharmaceutical area is dedicated to the research of isolation, structural analysis and biological activities in different biological systems of macromolecules. These macromolecules are peptides or proteins, either native or recombinant with medical or pharmaceutical interest. During this period new proteins related to serine protease activity, breast cancer development and angiogenesis were described. The effects of ionizing radiation on macromolecules have also been investigated to detoxify animal venoms in order to improve antigens for

  20. Biotechnology

    Energy Technology Data Exchange (ETDEWEB)

    NONE

    2014-07-01

    The guidelines of the Biotechnology Program are research and development aiming at developing and manufacturing products of pharmaceutical interest. This Program has two main research areas, namely Pituitary Hormones and Biopharmaceuticals. The first one comprises a group with a long experience on Recombinant Human Pituitary Hormone synthesis, purification and characterization. Up to now they have worked mostly with human growth hormone (hGH), human prolactin (hPRL), human thyrotropin (hTSH), human follicle stimulating hormone (hFSH) and human luteotropin (hLH), with a particular emphasis on glycoprotein carbohydrate structures. An important research line is devoted to Growth Hormone Gene Therapy, working mostly on animal models: immunocompetent and immunodeficient-dwarf mice. For several years this development has been based on ex vivo grafting of transduced keratinocytes, while more recently very promising results have been obtained with the injections and electroporation of naked plasmid DNA. Besides research, they have also activities in the Biotechnological Production and Downstream Processing of the same recombinant hormones, which are produced in both E. coli and mammalian cells and in the development of joint-ventures with the National Industry. The biological effects of radiation on cells are also studied, specially concerning the administration of {sup 131}I together with thyroid-stimulating hormone in thyroid cancer. The Biopharmaceutical area is dedicated to the research of isolation, structural analysis and biological activities in different biological systems of macromolecules. These macromolecules are peptides or proteins, either native or recombinant with medical or pharmaceutical interest. During this period new proteins related to serine protease activity, breast cancer development and angiogenesis were described. The effects of ionizing radiation on macromolecules have also been investigated to detoxify animal venoms in order to improve antigens

  1. Biotechnologies

    Directory of Open Access Journals (Sweden)

    Rival Alain

    2001-07-01

    Full Text Available Today, a range of biotechnological approaches, from somatic embryogenesis to biomolecular research, play an increasingly important role in breeding strategies for oil palm (Elaeis guineensis Jacq.. Clonal micropropagation. Methods of cloning by in vitro culture led to the development of a micropropagation technique for oil palm based on somatic embryogenesis which was tested at the pilot stage on elite genotypes, thus enabling the production of high oil yielding clones. This phase allowed the identification of limiting factors associated with scaling-up, with respect in particular to the scale of mass production required to meet the needs of planters and to the problem of ensuring genetic fidelity in the regenerated plant material. These two concerns led researchers to look further into the underlying physiological and/or molecular mechanisms involved in somatic embryogenesis and the somaclonal variation events induced by the in vitro cloning procedure. Structural and functional genomics. Marker-assisted breeding in oil palm is a long-term multi-stage project including: molecular analysis of genetic diversity in both E. guineensis and E. oleifera germplasms; large scale development of PCR-based microsatellite markers; and parallel development of three genome mapping and QTL detection projects studying key agronomic characters. Post-genomics. In order to tackle the problem of the mantled flowering abnormality, which is induced during the micropropagation process, studies of gene expression have been carried out in tissue cultures as a means of establishing an early clonal conformity testing procedure. It is important to assess what kind of methodology is the most appropriate for clonal conformity testing by comparing RNA, protein and DNA (PCR based approaches. Parallel studies on genomic DNA methylation changes induced by tissue culture suggest that the latter may play an important role in the determination of the mantled abnormality.

  2. Biotechnology 2007

    International Nuclear Information System (INIS)

    2007-12-01

    This book deals with Bio-vision 2016 on the meaning and important contents Next, it reveals vision of biotechnology, current condition of biotechnology in the main countries such as the U.S, Japan, Eu and China, promoting nation biotechnology with promotion policy, support policy for biotechnology such as agriculture and forestry and information and communication, competitiveness of biotechnology, research development by fields and related industries and regulation and system on biotechnology.

  3. Biotechnology Computing: Information Science for the Era of Molecular Medicine.

    Science.gov (United States)

    Masys, Daniel R.

    1989-01-01

    The evolution from classical genetics to biotechnology, an area of research involving key macromolecules in living cells, is chronicled and the current state of biotechnology is described, noting related advances in computing and clinical medicine. (MSE)

  4. Development of a PSA information database system

    International Nuclear Information System (INIS)

    Kim, Seung Hwan

    2005-01-01

    The need to develop the PSA information database for performing a PSA has been growing rapidly. For example, performing a PSA requires a lot of data to analyze, to evaluate the risk, to trace the process of results and to verify the results. PSA information database is a system that stores all PSA related information into the database and file system with cross links to jump to the physical documents whenever they are needed. Korea Atomic Energy Research Institute is developing a PSA information database system, AIMS (Advanced Information Management System for PSA). The objective is to integrate and computerize all the distributed information of a PSA into a system and to enhance the accessibility to PSA information for all PSA related activities. This paper describes how we implemented such a database centered application in the view of two areas, database design and data (document) service

  5. Audit Database and Information Tracking System

    Data.gov (United States)

    Social Security Administration — This database contains information about the Social Security Administration's audits regarding SSA agency performance and compliance. These audits can be requested...

  6. Database, expert systems, information retrieval

    International Nuclear Information System (INIS)

    Fedele, P.; Grandoni, G.; Mammarella, M.C.

    1989-12-01

    The great debate concerning the Italian high-school reform has induced a ferment of activity among the most interested and sensible of people. This was clearly demonstrated by the course 'Innovazione metodologico-didattica e tecnologie informatiche' organized for the staff of the 'lstituto Professionale L. Einaudi' of Lamezia Terme. The course was an interesting opportunity for discussions and interaction between the world of School and computer technology used in the Research field. This three day course included theoretical and practical lessons, showing computer facilities that could be useful for teaching. During the practical lessons some computer tools were presented from the very simple Electronic Sheets to the more complicated information Retrieval on CD-ROM interactive realizations. The main topics will be discussed later. They are: Modelling, Data Base, Integrated Information Systems, Expert Systems, Information Retrieval. (author)

  7. Repetitive Bibliographical Information in Relational Databases.

    Science.gov (United States)

    Brooks, Terrence A.

    1988-01-01

    Proposes a solution to the problem of loading repetitive bibliographic information in a microcomputer-based relational database management system. The alternative design described is based on a representational redundancy design and normalization theory. (12 references) (Author/CLB)

  8. HIERARCHICAL ORGANIZATION OF INFORMATION, IN RELATIONAL DATABASES

    Directory of Open Access Journals (Sweden)

    Demian Horia

    2008-05-01

    Full Text Available In this paper I will present different types of representation, of hierarchical information inside a relational database. I also will compare them to find the best organization for specific scenarios.

  9. Saccharomyces genome database informs human biology

    OpenAIRE

    Skrzypek, Marek S; Nash, Robert S; Wong, Edith D; MacPherson, Kevin A; Hellerstedt, Sage T; Engel, Stacia R; Karra, Kalpana; Weng, Shuai; Sheppard, Travis K; Binkley, Gail; Simison, Matt; Miyasato, Stuart R; Cherry, J Michael

    2017-01-01

    Abstract The Saccharomyces Genome Database (SGD; http://www.yeastgenome.org) is an expertly curated database of literature-derived functional information for the model organism budding yeast, Saccharomyces cerevisiae. SGD constantly strives to synergize new types of experimental data and bioinformatics predictions with existing data, and to organize them into a comprehensive and up-to-date information resource. The primary mission of SGD is to facilitate research into the biology of yeast and...

  10. Discovering new information in bibliographic databases

    Directory of Open Access Journals (Sweden)

    Emil Hudomalj

    2005-01-01

    Full Text Available Databases contain information that can usually not be revealed by standard query systems. For that purpose, the methods for knowledge discovery from databases can be applied, which enable the user to browse aggregated data, discover trends, produce online reports, explore possible new associations within the data etc. Such methods are successfully employed in various fields, such as banking, insurance and telecommunications, while they are seldom used in libraries. The article reviews the development of query systems for bibliographic databases, including some early attempts to apply modern knowledge discovery methods. Analytical databases are described in more detail, since they usually serve as the basis for knowledge discovery. Data mining approaches are presented, since they are a central step in the knowledge discovery process. The key role of librarians who can play a key part in developing systems for finding new information in existing bibliographic databases is stressed.

  11. Creating databases for biological information: an introduction.

    Science.gov (United States)

    Stein, Lincoln

    2013-06-01

    The essence of bioinformatics is dealing with large quantities of information. Whether it be sequencing data, microarray data files, mass spectrometric data (e.g., fingerprints), the catalog of strains arising from an insertional mutagenesis project, or even large numbers of PDF files, there inevitably comes a time when the information can simply no longer be managed with files and directories. This is where databases come into play. This unit briefly reviews the characteristics of several database management systems, including flat file, indexed file, relational databases, and NoSQL databases. It compares their strengths and weaknesses and offers some general guidelines for selecting an appropriate database management system. Copyright 2013 by JohnWiley & Sons, Inc.

  12. NABIC marker database: A molecular markers information network of agricultural crops.

    Science.gov (United States)

    Kim, Chang-Kug; Seol, Young-Joo; Lee, Dong-Jun; Jeong, In-Seon; Yoon, Ung-Han; Lee, Gang-Seob; Hahn, Jang-Ho; Park, Dong-Suk

    2013-01-01

    In 2013, National Agricultural Biotechnology Information Center (NABIC) reconstructs a molecular marker database for useful genetic resources. The web-based marker database consists of three major functional categories: map viewer, RSN marker and gene annotation. It provides 7250 marker locations, 3301 RSN marker property, 3280 molecular marker annotation information in agricultural plants. The individual molecular marker provides information such as marker name, expressed sequence tag number, gene definition and general marker information. This updated marker-based database provides useful information through a user-friendly web interface that assisted in tracing any new structures of the chromosomes and gene positional functions using specific molecular markers. The database is available for free at http://nabic.rda.go.kr/gere/rice/molecularMarkers/

  13. Evolution of Biotechnology and Information Technology and Its Impact on Human Security

    Directory of Open Access Journals (Sweden)

    Elena S. Zinovieva

    2015-01-01

    Full Text Available Abstract: The development of post-industrial society initiates profound economic, technological and cultural change in the way of life of all mankind. The revolutionary breakthroughs in the field of new technologies such as biotechnology and information technology are reflected in all spheres of human activity, directly affecting the human security. The article analyzes the consequences of widespread usage biotechnology and information technology in the foreign policy practice on the basis of the human security theory. The detailed description of the main directions of the use of biometric technology in the foreign policy and consular practices is provided, the challenges and threats to information security associated with biometrics are analyzed, arising from widespread biotechnology are the main challenges and threats to as well as human security threats arising at the present stage of development and application of these technologies. Human security threats associated with the use of biotechnology are placed in the broader context of global trends in scientific and technological development. The recommendations are formulated in the field of foreign policy and international cooperation, which would neutralize new threats to international and personal safety arising at the present stage of development of biotechnology. The authors conclude that in order to ensure ethical regulation of new technologies that address issues of human security, it is necessary to organize multi-stakeholder partnerships at national and international level with the participation of states, representatives of civil society, business and the research community.

  14. Nuclear Criticality Information System. Database examples

    Energy Technology Data Exchange (ETDEWEB)

    Foret, C.A.

    1984-06-01

    The purpose of this publication is to provide our users with a guide to using the Nuclear Criticality Information System (NCIS). It is comprised of an introduction, an information and resources section, a how-to-use section, and several useful appendices. The main objective of this report is to present a clear picture of the NCIS project and its available resources as well as assisting our users in accessing the database and using the TIS computer to process data. The introduction gives a brief description of the NCIS project, the Technology Information System (TIS), online user information, future plans and lists individuals to contact for additional information about the NCIS project. The information and resources section outlines the NCIS database and describes the resources that are available. The how-to-use section illustrates access to the NCIS database as well as searching datafiles for general or specific data. It also shows how to access and read the NCIS news section as well as connecting to other information centers through the TIS computer.

  15. Nuclear Criticality Information System. Database examples

    International Nuclear Information System (INIS)

    Foret, C.A.

    1984-06-01

    The purpose of this publication is to provide our users with a guide to using the Nuclear Criticality Information System (NCIS). It is comprised of an introduction, an information and resources section, a how-to-use section, and several useful appendices. The main objective of this report is to present a clear picture of the NCIS project and its available resources as well as assisting our users in accessing the database and using the TIS computer to process data. The introduction gives a brief description of the NCIS project, the Technology Information System (TIS), online user information, future plans and lists individuals to contact for additional information about the NCIS project. The information and resources section outlines the NCIS database and describes the resources that are available. The how-to-use section illustrates access to the NCIS database as well as searching datafiles for general or specific data. It also shows how to access and read the NCIS news section as well as connecting to other information centers through the TIS computer

  16. Information persistence using XML database technology

    Science.gov (United States)

    Clark, Thomas A.; Lipa, Brian E. G.; Macera, Anthony R.; Staskevich, Gennady R.

    2005-05-01

    The Joint Battlespace Infosphere (JBI) Information Management (IM) services provide information exchange and persistence capabilities that support tailored, dynamic, and timely access to required information, enabling near real-time planning, control, and execution for DoD decision making. JBI IM services will be built on a substrate of network centric core enterprise services and when transitioned, will establish an interoperable information space that aggregates, integrates, fuses, and intelligently disseminates relevant information to support effective warfighter business processes. This virtual information space provides individual users with information tailored to their specific functional responsibilities and provides a highly tailored repository of, or access to, information that is designed to support a specific Community of Interest (COI), geographic area or mission. Critical to effective operation of JBI IM services is the implementation of repositories, where data, represented as information, is represented and persisted for quick and easy retrieval. This paper will address information representation, persistence and retrieval using existing database technologies to manage structured data in Extensible Markup Language (XML) format as well as unstructured data in an IM services-oriented environment. Three basic categories of database technologies will be compared and contrasted: Relational, XML-Enabled, and Native XML. These technologies have diverse properties such as maturity, performance, query language specifications, indexing, and retrieval methods. We will describe our application of these evolving technologies within the context of a JBI Reference Implementation (RI) by providing some hopefully insightful anecdotes and lessons learned along the way. This paper will also outline future directions, promising technologies and emerging COTS products that can offer more powerful information management representations, better persistence mechanisms and

  17. CONSUMER BIOTECHNOLOGY FOOD AND NUTRITION INFORMATION SOURCES: THE TRUST FACTOR

    OpenAIRE

    Ekanem, Enefiok P.; Muhammad, Safdar; Tegegne, Fisseha; Singh, Surendra P.

    2004-01-01

    Although much has been written on consumer attitudes toward genetically modified foods, not much is known about how or where consumers get the information for the decisions they make about genetically modified foods. This paper reports on the media used by consumers in acquiring information about biotech food and nutrition issues, and examines how much trust consumers put in selected information sources. The paper also discusses how socio-economic variables affect level of trust in selected s...

  18. Advanced information technology: Building stronger databases

    Energy Technology Data Exchange (ETDEWEB)

    Price, D. [Lawrence Livermore National Lab., CA (United States)

    1994-12-01

    This paper discusses the attributes of the Advanced Information Technology (AIT) tool set, a database application builder designed at the Lawrence Livermore National Laboratory. AIT consists of a C library and several utilities that provide referential integrity across a database, interactive menu and field level help, and a code generator for building tightly controlled data entry support. AIT also provides for dynamic menu trees, report generation support, and creation of user groups. Composition of the library and utilities is discussed, along with relative strengths and weaknesses. In addition, an instantiation of the AIT tool set is presented using a specific application. Conclusions about the future and value of the tool set are then drawn based on the use of the tool set with that specific application.

  19. Intelligent Access to Sequence and Structure Databases (IASSD) - an interface for accessing information from major web databases.

    Science.gov (United States)

    Ganguli, Sayak; Gupta, Manoj Kumar; Basu, Protip; Banik, Rahul; Singh, Pankaj Kumar; Vishal, Vineet; Bera, Abhisek Ranjan; Chakraborty, Hirak Jyoti; Das, Sasti Gopal

    2014-01-01

    With the advent of age of big data and advances in high throughput technology accessing data has become one of the most important step in the entire knowledge discovery process. Most users are not able to decipher the query result that is obtained when non specific keywords or a combination of keywords are used. Intelligent access to sequence and structure databases (IASSD) is a desktop application for windows operating system. It is written in Java and utilizes the web service description language (wsdl) files and Jar files of E-utilities of various databases such as National Centre for Biotechnology Information (NCBI) and Protein Data Bank (PDB). Apart from that IASSD allows the user to view protein structure using a JMOL application which supports conditional editing. The Jar file is freely available through e-mail from the corresponding author.

  20. ASEAN Mineral Database and Information System (AMDIS)

    Science.gov (United States)

    Okubo, Y.; Ohno, T.; Bandibas, J. C.; Wakita, K.; Oki, Y.; Takahashi, Y.

    2014-12-01

    AMDIS has lunched officially since the Fourth ASEAN Ministerial Meeting on Minerals on 28 November 2013. In cooperation with Geological Survey of Japan, the web-based GIS was developed using Free and Open Source Software (FOSS) and the Open Geospatial Consortium (OGC) standards. The system is composed of the local databases and the centralized GIS. The local databases created and updated using the centralized GIS are accessible from the portal site. The system introduces distinct advantages over traditional GIS. Those are a global reach, a large number of users, better cross-platform capability, charge free for users, charge free for provider, easy to use, and unified updates. Raising transparency of mineral information to mining companies and to the public, AMDIS shows that mineral resources are abundant throughout the ASEAN region; however, there are many datum vacancies. We understand that such problems occur because of insufficient governance of mineral resources. Mineral governance we refer to is a concept that enforces and maximizes the capacity and systems of government institutions that manages minerals sector. The elements of mineral governance include a) strengthening of information infrastructure facility, b) technological and legal capacities of state-owned mining companies to fully-engage with mining sponsors, c) government-led management of mining projects by supporting the project implementation units, d) government capacity in mineral management such as the control and monitoring of mining operations, and e) facilitation of regional and local development plans and its implementation with the private sector.

  1. Databases and information systems: Applications in biogeography

    International Nuclear Information System (INIS)

    Escalante E, Tania; Llorente B, Jorge; Espinoza O, David N; Soberon M, Jorge

    2000-01-01

    Some aspects of the new instrumentalization and methodological elements that make up information systems in biodiversity (ISB) are described. The use of accurate geographically referenced data allows a broad range of available sources: natural history collections and scientific literature require the use of databases and geographic information systems (GIS). The conceptualization of ISB and GIS, based in the use of extensive data bases, has implied detailed modeling and the construction of authoritative archives: exhaustive catalogues of nomenclature and synonymies, complete bibliographic lists, list of names proposed, historical-geographic gazetteers with localities and their synonyms united under a global positioning system which produces a geospheric conception of the earth and its biota. Certain difficulties in the development of the system and the construction of the biological databases are explained: quality control of data, for example. The use of such systems is basic in order to respond to many questions at the frontier of current studies of biodiversity and conservation. In particular, some applications in biogeography and their importance for modeling distributions, to identify and contrast areas of endemism and biological richness for conservation, and their use as tools in what we identify as predictive and experimental faunistics are detailed. Lastly, the process as well as its relevance is emphasized at national and regional levels

  2. Selection of nuclear power information database management system

    International Nuclear Information System (INIS)

    Zhang Shuxin; Wu Jianlei

    1996-01-01

    In the condition of the present database technology, in order to build the Chinese nuclear power information database (NPIDB) in the nuclear industry system efficiently at a high starting point, an important task is to select a proper database management system (DBMS), which is the hinge of the matter to build the database successfully. Therefore, this article explains how to build a practical information database about nuclear power, the functions of different database management systems, the reason of selecting relation database management system (RDBMS), the principles of selecting RDBMS, the recommendation of ORACLE management system as the software to build database and so on

  3. Databases

    Digital Repository Service at National Institute of Oceanography (India)

    Kunte, P.D.

    Information on bibliographic as well as numeric/textual databases relevant to coastal geomorphology has been included in a tabular form. Databases cover a broad spectrum of related subjects like coastal environment and population aspects, coastline...

  4. 47 CFR 69.120 - Line information database.

    Science.gov (United States)

    2010-10-01

    ... 47 Telecommunication 3 2010-10-01 2010-10-01 false Line information database. 69.120 Section 69...) ACCESS CHARGES Computation of Charges § 69.120 Line information database. (a) A charge that is expressed... from a local exchange carrier database to recover the costs of: (1) The transmission facilities between...

  5. Relational Database Design in Information Science Education.

    Science.gov (United States)

    Brooks, Terrence A.

    1985-01-01

    Reports on database management system (dbms) applications designed by library school students for university community at University of Iowa. Three dbms design issues are examined: synthesis of relations, analysis of relations (normalization procedure), and data dictionary usage. Database planning prior to automation using data dictionary approach…

  6. Development of Information Technology of Object-relational Databases Design

    Directory of Open Access Journals (Sweden)

    Valentyn A. Filatov

    2012-12-01

    Full Text Available The article is concerned with the development of information technology of object-relational databases design and study of object features infological and logical database schemes entities and connections.

  7. Development of a geotechnical information database.

    Science.gov (United States)

    2009-06-01

    The purpose of this project was to create a database for existing, current, and future geotechnical records and data. : The project originated from the Geotechnical Design Section at the Louisiana Department of Transportation and : Development (LADOT...

  8. Development of technical information database for high level waste disposal

    International Nuclear Information System (INIS)

    Kudo, Koji; Takada, Susumu; Kawanishi, Motoi

    2005-01-01

    A concept design of the high level waste disposal information database and the disposal technologies information database are explained. The high level waste disposal information database contains information on technologies, waste, management and rules, R and D, each step of disposal site selection, characteristics of sites, demonstration of disposal technology, design of disposal site, application for disposal permit, construction of disposal site, operation and closing. Construction of the disposal technologies information system and the geological disposal technologies information system is described. The screen image of the geological disposal technologies information system is shown. User is able to search the full text retrieval and attribute retrieval in the image. (S.Y. )

  9. ORF information - KOME | LSDB Archive [Life Science Database Archive metadata

    Lifescience Database Archive (English)

    Full Text Available switchLanguage; BLAST Search Image Search Home About Archive Update History Data ... File URL: ftp://ftp.biosciencedbc.jp/archive/kome/LATEST/kome_orf_infomation.zip File size: 526 KB Simple s...ut This Database Database Description Download License Update History of This Database Site Policy | Contact Us ORF information - KOME | LSDB Archive ...

  10. Content-Based Information Retrieval from Forensic Databases

    NARCIS (Netherlands)

    Geradts, Z.J.M.H.

    2002-01-01

    In forensic science, the number of image databases is growing rapidly. For this reason, it is necessary to have a proper procedure for searching in these images databases based on content. The use of image databases results in more solved crimes; furthermore, statistical information can be obtained

  11. 48 CFR 804.1102 - Vendor Information Pages (VIP) Database.

    Science.gov (United States)

    2010-10-01

    ... (VIP) Database. 804.1102 Section 804.1102 Federal Acquisition Regulations System DEPARTMENT OF VETERANS AFFAIRS GENERAL ADMINISTRATIVE MATTERS Contract Execution 804.1102 Vendor Information Pages (VIP) Database. Prior to January 1, 2012, all VOSBs and SDVOSBs must be listed in the VIP database, available at http...

  12. Database and applications security integrating information security and data management

    CERN Document Server

    Thuraisingham, Bhavani

    2005-01-01

    This is the first book to provide an in-depth coverage of all the developments, issues and challenges in secure databases and applications. It provides directions for data and application security, including securing emerging applications such as bioinformatics, stream information processing and peer-to-peer computing. Divided into eight sections, each of which focuses on a key concept of secure databases and applications, this book deals with all aspects of technology, including secure relational databases, inference problems, secure object databases, secure distributed databases and emerging

  13. Database structure and file layout of Nuclear Power Plant Database. Database for design information on Light Water Reactors in Japan

    International Nuclear Information System (INIS)

    Yamamoto, Nobuo; Izumi, Fumio.

    1995-12-01

    The Nuclear Power Plant Database (PPD) has been developed at the Japan Atomic Energy Research Institute (JAERI) to provide plant design information on domestic Light Water Reactors (LWRs) to be used for nuclear safety research and so forth. This database can run on the main frame computer in the JAERI Tokai Establishment. The PPD contains the information on the plant design concepts, the numbers, capacities, materials, structures and types of equipment and components, etc, based on the safety analysis reports of the domestic LWRs. This report describes the details of the PPD focusing on the database structure and layout of data files so that the users can utilize it efficiently. (author)

  14. Status report on nuclear power - information from STN databases

    International Nuclear Information System (INIS)

    Prinz, H.

    1995-01-01

    The worldwide future of nuclear power as seen about 25 years ago is presented based on a literature search in the INIS database. The role of nuclear power today, after TMI and Chernobyl, in energy supplies and in combating the greehouse effect is evaluated by literature searches in STN databases (e.g. INIS, ETDE, COMPENDEX, CA, ULIDAT, INSPEC). An evaluation is given of the different information contents of bibliographic databases such as INIS and pure information databases such as NLDB. (orig./HP)

  15. Content Is King: Databases Preserve the Collective Information of Science.

    Science.gov (United States)

    Yates, John R

    2018-04-01

    Databases store sequence information experimentally gathered to create resources that further science. In the last 20 years databases have become critical components of fields like proteomics where they provide the basis for large-scale and high-throughput proteomic informatics. Amos Bairoch, winner of the Association of Biomolecular Resource Facilities Frederick Sanger Award, has created some of the important databases proteomic research depends upon for accurate interpretation of data.

  16. Brain Tumor Database, a free relational database for collection and analysis of brain tumor patient information.

    Science.gov (United States)

    Bergamino, Maurizio; Hamilton, David J; Castelletti, Lara; Barletta, Laura; Castellan, Lucio

    2015-03-01

    In this study, we describe the development and utilization of a relational database designed to manage the clinical and radiological data of patients with brain tumors. The Brain Tumor Database was implemented using MySQL v.5.0, while the graphical user interface was created using PHP and HTML, thus making it easily accessible through a web browser. This web-based approach allows for multiple institutions to potentially access the database. The BT Database can record brain tumor patient information (e.g. clinical features, anatomical attributes, and radiological characteristics) and be used for clinical and research purposes. Analytic tools to automatically generate statistics and different plots are provided. The BT Database is a free and powerful user-friendly tool with a wide range of possible clinical and research applications in neurology and neurosurgery. The BT Database graphical user interface source code and manual are freely available at http://tumorsdatabase.altervista.org. © The Author(s) 2013.

  17. Biotechnology awareness study, Part 2: Meeting the information needs of biotechnologists.

    Science.gov (United States)

    Cunningham, D; Grefsheim, S; Simon, M; Lansing, P S

    1991-01-01

    The second part of the biotechnology awareness study focused on health sciences libraries and how well they are meeting the needs of biotechnologists working in the study's nine medical centers. A survey was conducted over a three-month period to assess the demand for biotechnology-related reference services at nine libraries and the sources the librarians used to answer the questions. Data on monographic and current serial holdings were also collected. At the end of the survey period, librarians were asked for their perceptions about biotechnology research at their institutions and in their geographic areas. Their responses were compared to the responses the scientists at the nine schools gave to the same or similar questions. Results showed few biotechnology-related reference questions were asked of the librarians. The recorded questions dealt with a range of biotechnology subjects. MEDLINE was used to answer 77% of the questions received during the survey period. More detailed notes in MeSH and a guide to online searching for biotechnology topics were suggested by the librarians as ways to improve reference service to this group of researchers. Journal collections were generally strong, with libraries owning from 50% to 87% of the titles on a core list of biotechnology journals compiled for this study. All libraries subscribed to the five titles most often cited by the scientists surveyed. Generally, librarians were unaware of the biotechnology-related research being done on their campuses or in their geographic areas. PMID:1998819

  18. On Region Algebras, XML Databases, and Information Retrieval

    NARCIS (Netherlands)

    Mihajlovic, V.; Hiemstra, Djoerd; Apers, Peter M.G.

    2003-01-01

    This paper describes some new ideas on developing a logical algebra for databases that manage textual data and support information retrieval functionality. We describe a first prototype of such a system.

  19. CHID: a unique health information and education database.

    OpenAIRE

    Lunin, L F; Stein, R S

    1987-01-01

    The public's growing interest in health information and the health professions' increasing need to locate health education materials can be answered in part by the new Combined Health Information Database (CHID). This unique database focuses on materials and programs in professional and patient education, general health education, and community risk reduction. Accessible through BRS, CHID suggests sources for procuring brochures, pamphlets, articles, and films on community services, programs ...

  20. DOE technology information management system database study report

    Energy Technology Data Exchange (ETDEWEB)

    Widing, M.A.; Blodgett, D.W.; Braun, M.D.; Jusko, M.J.; Keisler, J.M.; Love, R.J.; Robinson, G.L. [Argonne National Lab., IL (United States). Decision and Information Sciences Div.

    1994-11-01

    To support the missions of the US Department of Energy (DOE) Special Technologies Program, Argonne National Laboratory is defining the requirements for an automated software system that will search electronic databases on technology. This report examines the work done and results to date. Argonne studied existing commercial and government sources of technology databases in five general areas: on-line services, patent database sources, government sources, aerospace technology sources, and general technology sources. First, it conducted a preliminary investigation of these sources to obtain information on the content, cost, frequency of updates, and other aspects of their databases. The Laboratory then performed detailed examinations of at least one source in each area. On this basis, Argonne recommended which databases should be incorporated in DOE`s Technology Information Management System.

  1. Advanced approaches to intelligent information and database systems

    CERN Document Server

    Boonjing, Veera; Chittayasothorn, Suphamit

    2014-01-01

    This book consists of 35 chapters presenting different theoretical and practical aspects of Intelligent Information and Database Systems. Nowadays both Intelligent and Database Systems are applied in most of the areas of human activities which necessitates further research in these areas. In this book various interesting issues related to the intelligent information models and methods as well as their advanced applications, database systems applications, data models and their analysis, and digital multimedia methods and applications are presented and discussed both from the practical and theoretical points of view. The book is organized in four parts devoted to intelligent systems models and methods, intelligent systems advanced applications, database systems methods and applications, and multimedia systems methods and applications. The book will be interesting for both practitioners and researchers, especially graduate and PhD students of information technology and computer science, as well more experienced ...

  2. Information Retrieval in Telemedicine: a Comparative Study on Bibliographic Databases.

    Science.gov (United States)

    Ahmadi, Maryam; Sarabi, Roghayeh Ershad; Orak, Roohangiz Jamshidi; Bahaadinbeigy, Kambiz

    2015-06-01

    The first step in each systematic review is selection of the most valid database that can provide the highest number of relevant references. This study was carried out to determine the most suitable database for information retrieval in telemedicine field. Cinhal, PubMed, Web of Science and Scopus databases were searched for telemedicine matched with Education, cost benefit and patient satisfaction. After analysis of the obtained results, the accuracy coefficient, sensitivity, uniqueness and overlap of databases were calculated. The studied databases differed in the number of retrieved articles. PubMed was identified as the most suitable database for retrieving information on the selected topics with the accuracy and sensitivity ratios of 50.7% and 61.4% respectively. The uniqueness percent of retrieved articles ranged from 38% for Pubmed to 3.0% for Cinhal. The highest overlap rate (18.6%) was found between PubMed and Web of Science. Less than 1% of articles have been indexed in all searched databases. PubMed is suggested as the most suitable database for starting search in telemedicine and after PubMed, Scopus and Web of Science can retrieve about 90% of the relevant articles.

  3. Fish Karyome: A karyological information network database of Indian Fishes.

    Science.gov (United States)

    Nagpure, Naresh Sahebrao; Pathak, Ajey Kumar; Pati, Rameshwar; Singh, Shri Prakash; Singh, Mahender; Sarkar, Uttam Kumar; Kushwaha, Basdeo; Kumar, Ravindra

    2012-01-01

    'Fish Karyome', a database on karyological information of Indian fishes have been developed that serves as central source for karyotype data about Indian fishes compiled from the published literature. Fish Karyome has been intended to serve as a liaison tool for the researchers and contains karyological information about 171 out of 2438 finfish species reported in India and is publically available via World Wide Web. The database provides information on chromosome number, morphology, sex chromosomes, karyotype formula and cytogenetic markers etc. Additionally, it also provides the phenotypic information that includes species name, its classification, and locality of sample collection, common name, local name, sex, geographical distribution, and IUCN Red list status. Besides, fish and karyotype images, references for 171 finfish species have been included in the database. Fish Karyome has been developed using SQL Server 2008, a relational database management system, Microsoft's ASP.NET-2008 and Macromedia's FLASH Technology under Windows 7 operating environment. The system also enables users to input new information and images into the database, search and view the information and images of interest using various search options. Fish Karyome has wide range of applications in species characterization and identification, sex determination, chromosomal mapping, karyo-evolution and systematics of fishes.

  4. Database system selection for marketing strategies support in information systems

    Directory of Open Access Journals (Sweden)

    František Dařena

    2007-01-01

    Full Text Available In today’s dynamically changing environment marketing has a significant role. Creating successful marketing strategies requires large amount of high quality information of various kinds and data types. A powerful database management system is a necessary condition for marketing strategies creation support. The paper briefly describes the field of marketing strategies and specifies the features that should be provided by database systems in connection with these strategies support. Major commercial (Oracle, DB2, MS SQL, Sybase and open-source (PostgreSQL, MySQL, Firebird databases are than examined from the point of view of accordance with these characteristics and their comparison in made. The results are useful for making the decision before acquisition of a database system during information system’s hardware architecture specification.

  5. 2008 Availability and Utilization of Electronic Information Databases ...

    African Journals Online (AJOL)

    Gbaje E.S

    electronic information databases include; research work, to update knowledge in their field of interest and Current awareness. ... be read by a computer device. CD ROMs are ... business and government innovation. Its ... technologies, ideas and management practices ..... sources of information and storage devices bring.

  6. The Eruption Forecasting Information System (EFIS) database project

    Science.gov (United States)

    Ogburn, Sarah; Harpel, Chris; Pesicek, Jeremy; Wellik, Jay; Pallister, John; Wright, Heather

    2016-04-01

    The Eruption Forecasting Information System (EFIS) project is a new initiative of the U.S. Geological Survey-USAID Volcano Disaster Assistance Program (VDAP) with the goal of enhancing VDAP's ability to forecast the outcome of volcanic unrest. The EFIS project seeks to: (1) Move away from relying on the collective memory to probability estimation using databases (2) Create databases useful for pattern recognition and for answering common VDAP questions; e.g. how commonly does unrest lead to eruption? how commonly do phreatic eruptions portend magmatic eruptions and what is the range of antecedence times? (3) Create generic probabilistic event trees using global data for different volcano 'types' (4) Create background, volcano-specific, probabilistic event trees for frequently active or particularly hazardous volcanoes in advance of a crisis (5) Quantify and communicate uncertainty in probabilities A major component of the project is the global EFIS relational database, which contains multiple modules designed to aid in the construction of probabilistic event trees and to answer common questions that arise during volcanic crises. The primary module contains chronologies of volcanic unrest, including the timing of phreatic eruptions, column heights, eruptive products, etc. and will be initially populated using chronicles of eruptive activity from Alaskan volcanic eruptions in the GeoDIVA database (Cameron et al. 2013). This database module allows us to query across other global databases such as the WOVOdat database of monitoring data and the Smithsonian Institution's Global Volcanism Program (GVP) database of eruptive histories and volcano information. The EFIS database is in the early stages of development and population; thus, this contribution also serves as a request for feedback from the community.

  7. Availability and Utilization of Electronic Information Databases by ...

    African Journals Online (AJOL)

    The study was undertaken to determine the Availability and Utilization of Electronic Information Database by Staff of the Agricultural Complex, Ahmadu Bello University, Zaria. A survey method was used for the study. Stratified sampling method was used to select 209 respondents to accommodate the different strata of the ...

  8. Utilizing Structural Knowledge for Information Retrieval in XML Databases

    NARCIS (Netherlands)

    Mihajlovic, V.; Hiemstra, Djoerd; Blok, H.E.; Apers, Peter M.G.

    In this paper we address the problem of immediate translation of eXtensible Mark-up Language (XML) information retrieval (IR) queries to relational database expressions and stress the benefits of using an intermediate XML-specific algebra over relational algebra. We show how adding an XML-specific

  9. ODIN. Online Database Information Network: ODIN Policy & Procedure Manual.

    Science.gov (United States)

    Townley, Charles T.; And Others

    Policies and procedures are outlined for the Online Database Information Network (ODIN), a cooperative of libraries in south-central Pennsylvania, which was organized to improve library services through technology. The first section covers organization and goals, members, and responsibilities of the administrative council and libraries. Patrons…

  10. An information integration system for structured documents, Web, and databases

    OpenAIRE

    Morishima, Atsuyuki

    1998-01-01

    Rapid advance in computer network technology has changed the style of computer utilization. Distributed computing resources over world-wide computer networks are available from our local computers. They include powerful computers and a variety of information sources. This change is raising more advanced requirements. Integration of distributed information sources is one of such requirements. In addition to conventional databases, structured documents have been widely used, and have increasing...

  11. Structure and function design for nuclear facilities decommissioning information database

    International Nuclear Information System (INIS)

    Liu Yongkuo; Song Yi; Wu Xiaotian; Liu Zhen

    2014-01-01

    The decommissioning of nuclear facilities is a radioactive and high-risk project which has to consider the effect of radiation and nuclear waste disposal, so the information system of nuclear facilities decommissioning project must be established to ensure the safety of the project. In this study, by collecting the decommissioning activity data, the decommissioning database was established, and based on the database, the decommissioning information database (DID) was developed. The DID can perform some basic operations, such as input, delete, modification and query of the decommissioning information data, and in accordance with processing characteristics of various types of information data, it can also perform information management with different function models. On this basis, analysis of the different information data will be done. The system is helpful for enhancing the management capability of the decommissioning process and optimizing the arrangements of the project, it also can reduce radiation dose of the workers, so the system is quite necessary for safe decommissioning of nuclear facilities. (authors)

  12. Database of Legal Terms for Communicative and Knowledge Information Tools

    DEFF Research Database (Denmark)

    Nielsen, Sandro

    2014-01-01

    foundations of online dictionaries in light of the technical options available for online information tools combined with modern lexicographic principles. The above discussion indicates that the legal database is a repository of structured data serving online dictionaries that search for data in databases......, retrieve the relevant data, and present them to users in predetermined ways. Lawyers, students and translators can thus access the data through targeted searches relating directly to the problems they need to solve, because search engines are designed according to dictionary functions, i.e. the type...

  13. Construction of a bibliographic information database for the nuclear engineering

    International Nuclear Information System (INIS)

    Kim, Tae Whan; Lim, Yeon Soo; Kwac, Dong Chul

    1991-12-01

    The major goal of the project is to develop a nuclear science database of materials that have been published in Korea and to establish a network system that will give relevant information to people in the nuclear industry by linking this system with the proposed National Science Technical Information Network. This project aims to establish a database consisted of about 1,000 research reports that were prepared by KAERI from 1979 to 1990. The contents of the project are as follows: 1. Materials Selection and Collection 2. Index and Abstract Preparation 3. Data Input and Transmission. This project is intended to achieve the goal of maximum utilization of nuclear information in Korea. (Author)

  14. 9th Asian Conference on Intelligent Information and Database Systems

    CERN Document Server

    Nguyen, Ngoc; Shirai, Kiyoaki

    2017-01-01

    This book presents recent research in intelligent information and database systems. The carefully selected contributions were initially accepted for presentation as posters at the 9th Asian Conference on Intelligent Information and Database Systems (ACIIDS 2017) held from to 5 April 2017 in Kanazawa, Japan. While the contributions are of an advanced scientific level, several are accessible for non-expert readers. The book brings together 47 chapters divided into six main parts: • Part I. From Machine Learning to Data Mining. • Part II. Big Data and Collaborative Decision Support Systems, • Part III. Computer Vision Analysis, Detection, Tracking and Recognition, • Part IV. Data-Intensive Text Processing, • Part V. Innovations in Web and Internet Technologies, and • Part VI. New Methods and Applications in Information and Software Engineering. The book is an excellent resource for researchers and those working in algorithmics, artificial and computational intelligence, collaborative systems, decisio...

  15. Accelerating Information Retrieval from Profile Hidden Markov Model Databases.

    Science.gov (United States)

    Tamimi, Ahmad; Ashhab, Yaqoub; Tamimi, Hashem

    2016-01-01

    Profile Hidden Markov Model (Profile-HMM) is an efficient statistical approach to represent protein families. Currently, several databases maintain valuable protein sequence information as profile-HMMs. There is an increasing interest to improve the efficiency of searching Profile-HMM databases to detect sequence-profile or profile-profile homology. However, most efforts to enhance searching efficiency have been focusing on improving the alignment algorithms. Although the performance of these algorithms is fairly acceptable, the growing size of these databases, as well as the increasing demand for using batch query searching approach, are strong motivations that call for further enhancement of information retrieval from profile-HMM databases. This work presents a heuristic method to accelerate the current profile-HMM homology searching approaches. The method works by cluster-based remodeling of the database to reduce the search space, rather than focusing on the alignment algorithms. Using different clustering techniques, 4284 TIGRFAMs profiles were clustered based on their similarities. A representative for each cluster was assigned. To enhance sensitivity, we proposed an extended step that allows overlapping among clusters. A validation benchmark of 6000 randomly selected protein sequences was used to query the clustered profiles. To evaluate the efficiency of our approach, speed and recall values were measured and compared with the sequential search approach. Using hierarchical, k-means, and connected component clustering techniques followed by the extended overlapping step, we obtained an average reduction in time of 41%, and an average recall of 96%. Our results demonstrate that representation of profile-HMMs using a clustering-based approach can significantly accelerate data retrieval from profile-HMM databases.

  16. Accelerating Information Retrieval from Profile Hidden Markov Model Databases.

    Directory of Open Access Journals (Sweden)

    Ahmad Tamimi

    Full Text Available Profile Hidden Markov Model (Profile-HMM is an efficient statistical approach to represent protein families. Currently, several databases maintain valuable protein sequence information as profile-HMMs. There is an increasing interest to improve the efficiency of searching Profile-HMM databases to detect sequence-profile or profile-profile homology. However, most efforts to enhance searching efficiency have been focusing on improving the alignment algorithms. Although the performance of these algorithms is fairly acceptable, the growing size of these databases, as well as the increasing demand for using batch query searching approach, are strong motivations that call for further enhancement of information retrieval from profile-HMM databases. This work presents a heuristic method to accelerate the current profile-HMM homology searching approaches. The method works by cluster-based remodeling of the database to reduce the search space, rather than focusing on the alignment algorithms. Using different clustering techniques, 4284 TIGRFAMs profiles were clustered based on their similarities. A representative for each cluster was assigned. To enhance sensitivity, we proposed an extended step that allows overlapping among clusters. A validation benchmark of 6000 randomly selected protein sequences was used to query the clustered profiles. To evaluate the efficiency of our approach, speed and recall values were measured and compared with the sequential search approach. Using hierarchical, k-means, and connected component clustering techniques followed by the extended overlapping step, we obtained an average reduction in time of 41%, and an average recall of 96%. Our results demonstrate that representation of profile-HMMs using a clustering-based approach can significantly accelerate data retrieval from profile-HMM databases.

  17. Biotechnology 2009

    International Nuclear Information System (INIS)

    2009-12-01

    This book first reveals prospect on biotechnology with low-carbon green growth Next, it consists of four chapters, which deal with vision of biotechnology, trend of biotechnology in main countries like the U.S, Eu, Japan and China, current condition for biotechnology with support and promoting policy such as health and medical treatment and maritime and fisheries, major product on investment, human power, paper and pattern, research development such as genomic, system biology, bio new medicine, agriculture, stock breeding and food, biological resources and legal system related biotechnology.

  18. 8th Asian Conference on Intelligent Information and Database Systems

    CERN Document Server

    Madeyski, Lech; Nguyen, Ngoc

    2016-01-01

    The objective of this book is to contribute to the development of the intelligent information and database systems with the essentials of current knowledge, experience and know-how. The book contains a selection of 40 chapters based on original research presented as posters during the 8th Asian Conference on Intelligent Information and Database Systems (ACIIDS 2016) held on 14–16 March 2016 in Da Nang, Vietnam. The papers to some extent reflect the achievements of scientific teams from 17 countries in five continents. The volume is divided into six parts: (a) Computational Intelligence in Data Mining and Machine Learning, (b) Ontologies, Social Networks and Recommendation Systems, (c) Web Services, Cloud Computing, Security and Intelligent Internet Systems, (d) Knowledge Management and Language Processing, (e) Image, Video, Motion Analysis and Recognition, and (f) Advanced Computing Applications and Technologies. The book is an excellent resource for researchers, those working in artificial intelligence, mu...

  19. Large-scale Health Information Database and Privacy Protection.

    Science.gov (United States)

    Yamamoto, Ryuichi

    2016-09-01

    Japan was once progressive in the digitalization of healthcare fields but unfortunately has fallen behind in terms of the secondary use of data for public interest. There has recently been a trend to establish large-scale health databases in the nation, and a conflict between data use for public interest and privacy protection has surfaced as this trend has progressed. Databases for health insurance claims or for specific health checkups and guidance services were created according to the law that aims to ensure healthcare for the elderly; however, there is no mention in the act about using these databases for public interest in general. Thus, an initiative for such use must proceed carefully and attentively. The PMDA projects that collect a large amount of medical record information from large hospitals and the health database development project that the Ministry of Health, Labour and Welfare (MHLW) is working on will soon begin to operate according to a general consensus; however, the validity of this consensus can be questioned if issues of anonymity arise. The likelihood that researchers conducting a study for public interest would intentionally invade the privacy of their subjects is slim. However, patients could develop a sense of distrust about their data being used since legal requirements are ambiguous. Nevertheless, without using patients' medical records for public interest, progress in medicine will grind to a halt. Proper legislation that is clear for both researchers and patients will therefore be highly desirable. A revision of the Act on the Protection of Personal Information is currently in progress. In reality, however, privacy is not something that laws alone can protect; it will also require guidelines and self-discipline. We now live in an information capitalization age. I will introduce the trends in legal reform regarding healthcare information and discuss some basics to help people properly face the issue of health big data and privacy

  20. Large-scale Health Information Database and Privacy Protection*1

    Science.gov (United States)

    YAMAMOTO, Ryuichi

    2016-01-01

    Japan was once progressive in the digitalization of healthcare fields but unfortunately has fallen behind in terms of the secondary use of data for public interest. There has recently been a trend to establish large-scale health databases in the nation, and a conflict between data use for public interest and privacy protection has surfaced as this trend has progressed. Databases for health insurance claims or for specific health checkups and guidance services were created according to the law that aims to ensure healthcare for the elderly; however, there is no mention in the act about using these databases for public interest in general. Thus, an initiative for such use must proceed carefully and attentively. The PMDA*2 projects that collect a large amount of medical record information from large hospitals and the health database development project that the Ministry of Health, Labour and Welfare (MHLW) is working on will soon begin to operate according to a general consensus; however, the validity of this consensus can be questioned if issues of anonymity arise. The likelihood that researchers conducting a study for public interest would intentionally invade the privacy of their subjects is slim. However, patients could develop a sense of distrust about their data being used since legal requirements are ambiguous. Nevertheless, without using patients’ medical records for public interest, progress in medicine will grind to a halt. Proper legislation that is clear for both researchers and patients will therefore be highly desirable. A revision of the Act on the Protection of Personal Information is currently in progress. In reality, however, privacy is not something that laws alone can protect; it will also require guidelines and self-discipline. We now live in an information capitalization age. I will introduce the trends in legal reform regarding healthcare information and discuss some basics to help people properly face the issue of health big data and privacy

  1. The eNanoMapper database for nanomaterial safety information

    Directory of Open Access Journals (Sweden)

    Nina Jeliazkova

    2015-07-01

    Full Text Available Background: The NanoSafety Cluster, a cluster of projects funded by the European Commision, identified the need for a computational infrastructure for toxicological data management of engineered nanomaterials (ENMs. Ontologies, open standards, and interoperable designs were envisioned to empower a harmonized approach to European research in nanotechnology. This setting provides a number of opportunities and challenges in the representation of nanomaterials data and the integration of ENM information originating from diverse systems. Within this cluster, eNanoMapper works towards supporting the collaborative safety assessment for ENMs by creating a modular and extensible infrastructure for data sharing, data analysis, and building computational toxicology models for ENMs.Results: The eNanoMapper database solution builds on the previous experience of the consortium partners in supporting diverse data through flexible data storage, open source components and web services. We have recently described the design of the eNanoMapper prototype database along with a summary of challenges in the representation of ENM data and an extensive review of existing nano-related data models, databases, and nanomaterials-related entries in chemical and toxicogenomic databases. This paper continues with a focus on the database functionality exposed through its application programming interface (API, and its use in visualisation and modelling. Considering the preferred community practice of using spreadsheet templates, we developed a configurable spreadsheet parser facilitating user friendly data preparation and data upload. We further present a web application able to retrieve the experimental data via the API and analyze it with multiple data preprocessing and machine learning algorithms.Conclusion: We demonstrate how the eNanoMapper database is used to import and publish online ENM and assay data from several data sources, how the “representational state

  2. The eNanoMapper database for nanomaterial safety information.

    Science.gov (United States)

    Jeliazkova, Nina; Chomenidis, Charalampos; Doganis, Philip; Fadeel, Bengt; Grafström, Roland; Hardy, Barry; Hastings, Janna; Hegi, Markus; Jeliazkov, Vedrin; Kochev, Nikolay; Kohonen, Pekka; Munteanu, Cristian R; Sarimveis, Haralambos; Smeets, Bart; Sopasakis, Pantelis; Tsiliki, Georgia; Vorgrimmler, David; Willighagen, Egon

    2015-01-01

    The NanoSafety Cluster, a cluster of projects funded by the European Commision, identified the need for a computational infrastructure for toxicological data management of engineered nanomaterials (ENMs). Ontologies, open standards, and interoperable designs were envisioned to empower a harmonized approach to European research in nanotechnology. This setting provides a number of opportunities and challenges in the representation of nanomaterials data and the integration of ENM information originating from diverse systems. Within this cluster, eNanoMapper works towards supporting the collaborative safety assessment for ENMs by creating a modular and extensible infrastructure for data sharing, data analysis, and building computational toxicology models for ENMs. The eNanoMapper database solution builds on the previous experience of the consortium partners in supporting diverse data through flexible data storage, open source components and web services. We have recently described the design of the eNanoMapper prototype database along with a summary of challenges in the representation of ENM data and an extensive review of existing nano-related data models, databases, and nanomaterials-related entries in chemical and toxicogenomic databases. This paper continues with a focus on the database functionality exposed through its application programming interface (API), and its use in visualisation and modelling. Considering the preferred community practice of using spreadsheet templates, we developed a configurable spreadsheet parser facilitating user friendly data preparation and data upload. We further present a web application able to retrieve the experimental data via the API and analyze it with multiple data preprocessing and machine learning algorithms. We demonstrate how the eNanoMapper database is used to import and publish online ENM and assay data from several data sources, how the "representational state transfer" (REST) API enables building user friendly

  3. Linking international trademark databases to inform IP research and policy

    Energy Technology Data Exchange (ETDEWEB)

    Petrie, P.

    2016-07-01

    Researchers and policy makers are concerned with many international issues regarding trademarks, such as trademark squatting, cluttering, and dilution. Trademark application data can provide an evidence base to inform government policy regarding these issues, and can also produce quantitative insights into economic trends and brand dynamics. Currently, national trademark databases can provide insight into economic and brand dynamics at the national level, but gaining such insight at an international level is more difficult due to a lack of internationally linked trademark data. We are in the process of building a harmonised international trademark database (the “Patstat of trademarks”), in which equivalent trademarks have been identified across national offices. We have developed a pilot database that incorporates 6.4 million U.S., 1.3 million Australian, and 0.5 million New Zealand trademark applications, spanning over 100 years. The database will be extended to incorporate trademark data from other participating intellectual property (IP) offices as they join the project. Confirmed partners include the United Kingdom, WIPO, and OHIM. We will continue to expand the scope of the project, and intend to include many more IP offices from around the world. In addition to building the pilot database, we have developed a linking algorithm that identifies equivalent trademarks (TMs) across the three jurisdictions. The algorithm can currently be applied to all applications that contain TM text; i.e. around 96% of all applications. In its current state, the algorithm successfully identifies ~ 97% of equivalent TMs that are known to be linked a priori, as they have shared international registration number through the Madrid protocol. When complete, the internationally linked trademark database will be a valuable resource for researchers and policy-makers in fields such as econometrics, intellectual property rights, and brand policy. (Author)

  4. TOMATOMICS: A Web Database for Integrated Omics Information in Tomato

    KAUST Repository

    Kudo, Toru; Kobayashi, Masaaki; Terashima, Shin; Katayama, Minami; Ozaki, Soichi; Kanno, Maasa; Saito, Misa; Yokoyama, Koji; Ohyanagi, Hajime; Aoki, Koh; Kubo, Yasutaka; Yano, Kentaro

    2016-01-01

    Solanum lycopersicum (tomato) is an important agronomic crop and a major model fruit-producing plant. To facilitate basic and applied research, comprehensive experimental resources and omics information on tomato are available following their development. Mutant lines and cDNA clones from a dwarf cultivar, Micro-Tom, are two of these genetic resources. Large-scale sequencing data for ESTs and full-length cDNAs from Micro-Tom continue to be gathered. In conjunction with information on the reference genome sequence of another cultivar, Heinz 1706, the Micro-Tom experimental resources have facilitated comprehensive functional analyses. To enhance the efficiency of acquiring omics information for tomato biology, we have integrated the information on the Micro-Tom experimental resources and the Heinz 1706 genome sequence. We have also inferred gene structure by comparison of sequences between the genome of Heinz 1706 and the transcriptome, which are comprised of Micro-Tom full-length cDNAs and Heinz 1706 RNA-seq data stored in the KaFTom and Sequence Read Archive databases. In order to provide large-scale omics information with streamlined connectivity we have developed and maintain a web database TOMATOMICS (http://bioinf.mind.meiji.ac.jp/tomatomics/). In TOMATOMICS, access to the information on the cDNA clone resources, full-length mRNA sequences, gene structures, expression profiles and functional annotations of genes is available through search functions and the genome browser, which has an intuitive graphical interface.

  5. TOMATOMICS: A Web Database for Integrated Omics Information in Tomato

    KAUST Repository

    Kudo, Toru

    2016-11-29

    Solanum lycopersicum (tomato) is an important agronomic crop and a major model fruit-producing plant. To facilitate basic and applied research, comprehensive experimental resources and omics information on tomato are available following their development. Mutant lines and cDNA clones from a dwarf cultivar, Micro-Tom, are two of these genetic resources. Large-scale sequencing data for ESTs and full-length cDNAs from Micro-Tom continue to be gathered. In conjunction with information on the reference genome sequence of another cultivar, Heinz 1706, the Micro-Tom experimental resources have facilitated comprehensive functional analyses. To enhance the efficiency of acquiring omics information for tomato biology, we have integrated the information on the Micro-Tom experimental resources and the Heinz 1706 genome sequence. We have also inferred gene structure by comparison of sequences between the genome of Heinz 1706 and the transcriptome, which are comprised of Micro-Tom full-length cDNAs and Heinz 1706 RNA-seq data stored in the KaFTom and Sequence Read Archive databases. In order to provide large-scale omics information with streamlined connectivity we have developed and maintain a web database TOMATOMICS (http://bioinf.mind.meiji.ac.jp/tomatomics/). In TOMATOMICS, access to the information on the cDNA clone resources, full-length mRNA sequences, gene structures, expression profiles and functional annotations of genes is available through search functions and the genome browser, which has an intuitive graphical interface.

  6. Workshop Summary for Maintaining Innovation and Security in Biotechnology: Lessons Learned from Nuclear, Chemical, and Informational Technologies

    Energy Technology Data Exchange (ETDEWEB)

    Althouse, Paris [Lawrence Livermore National Lab. (LLNL), Livermore, CA (United States)

    2017-10-11

    In the fast-paced field of biotechnology where innovation has such far-reaching impacts on human health and the environment, dealing with the implications of possible illicit activities, accidents or unintended research consequences with potential detrimental societal impacts tends to remain in the background. While controls may be inevitable for the biotech industry, workshop attendees agreed that the way in which controls are implemented will play a major role in the agility and innovation of the biotechnology industry. There is little desire to slow down the pace of the gains while dealing with the security issues that arise. As was seen from the brief examinations of the Nuclear, Chemical, and Information Technology sectors explored in this workshop, establishing a regulatory regime needs to be a partnership between the public, corporate interests, scientists, and the government. Regulation is often written to combat perceived risk rather than actual risk—the public’s perceptions (occasionally even fictional portrayals) can spur regulatory efforts. This leads to the need for a thorough and continuing assessment of the risks posed by modern biotechnology. Inadequate or minimal risk assessment might expedite development in the short term but has potential negative long-term security and economic consequences. Industry and the technical community also often have a large role in setting regulatory policy, especially when well-crafted incentives are incorporated into the regulations. Such incentives might actually lead to enhanced innovation while poorly designed incentives can actually reduce safety and security. Any regulations should be as agile and flexible as the technology they regulate and when applied to biotechnologies they will need a new framework for thinking and implementing. The new framework should consider biotechnology as a technology and not simply a science since it is an extremely complex and adaptive system. This suggests the need to invest

  7. World Biotechnology Leaders to Gather for Conference

    Science.gov (United States)

    Biotechnology Leaders to Gather for Conference For more information contact: e:mail: Public Affairs biotechnology leaders gather in Fort Collins, CO May 2-6 for the 21st Symposium on Biotechnology for Fuels and special session on funding opportunities for U.S. biotechnology projects. More than 175 presentations are

  8. The NIH genetic testing registry: a new, centralized database of genetic tests to enable access to comprehensive information and improve transparency.

    Science.gov (United States)

    Rubinstein, Wendy S; Maglott, Donna R; Lee, Jennifer M; Kattman, Brandi L; Malheiro, Adriana J; Ovetsky, Michael; Hem, Vichet; Gorelenkov, Viatcheslav; Song, Guangfeng; Wallin, Craig; Husain, Nora; Chitipiralla, Shanmuga; Katz, Kenneth S; Hoffman, Douglas; Jang, Wonhee; Johnson, Mark; Karmanov, Fedor; Ukrainchik, Alexander; Denisenko, Mikhail; Fomous, Cathy; Hudson, Kathy; Ostell, James M

    2013-01-01

    The National Institutes of Health Genetic Testing Registry (GTR; available online at http://www.ncbi.nlm.nih.gov/gtr/) maintains comprehensive information about testing offered worldwide for disorders with a genetic basis. Information is voluntarily submitted by test providers. The database provides details of each test (e.g. its purpose, target populations, methods, what it measures, analytical validity, clinical validity, clinical utility, ordering information) and laboratory (e.g. location, contact information, certifications and licenses). Each test is assigned a stable identifier of the format GTR000000000, which is versioned when the submitter updates information. Data submitted by test providers are integrated with basic information maintained in National Center for Biotechnology Information's databases and presented on the web and through FTP (ftp.ncbi.nih.gov/pub/GTR/_README.html).

  9. Proteomics: A Biotechnology Tool for Crop Improvement

    Directory of Open Access Journals (Sweden)

    Moustafa eEldakak

    2013-02-01

    Full Text Available A sharp decline in the availability of arable land and sufficient supply of irrigation water along with a continuous steep increase in food demands have exerted a pressure on farmers to produce more with fewer resources. A viable solution to release this pressure is to speed up the plant breeding process by employing biotechnology in breeding programs. The majority of biotechnological applications rely on information generated from various -omic technologies. The latest outstanding improvements in proteomic platforms and many other but related advances in plant biotechnology techniques offer various new ways to encourage the usage of these technologies by plant scientists for crop improvement programs. A combinatorial approach of accelerated gene discovery through genomics, proteomics, and other associated -omic branches of biotechnology, as an applied approach, is proving to be an effective way to speed up the crop improvement programs worldwide. In the near future, swift improvements in -omic databases are becoming critical and demand immediate attention for the effective utilization of these techniques to produce next-generation crops for the progressive farmers. Here, we have reviewed the recent advances in proteomics, as tools of biotechnology, which are offering great promise and leading the path towards crop improvement for sustainable agriculture.

  10. COMPARISON OF POPULAR BIOINFORMATICS DATABASES

    OpenAIRE

    Abdulganiyu Abdu Yusuf; Zahraddeen Sufyanu; Kabir Yusuf Mamman; Abubakar Umar Suleiman

    2016-01-01

    Bioinformatics is the application of computational tools to capture and interpret biological data. It has wide applications in drug development, crop improvement, agricultural biotechnology and forensic DNA analysis. There are various databases available to researchers in bioinformatics. These databases are customized for a specific need and are ranged in size, scope, and purpose. The main drawbacks of bioinformatics databases include redundant information, constant change, data spread over m...

  11. Genetic and bibliographic information - GenLibi | LSDB Archive [Life Science Database Archive metadata

    Lifescience Database Archive (English)

    Full Text Available n Data acquisition method Articles related to genes were obtained from the bibliography database (JDream II)...provided from the JST bibliographic information system (JDream II) About This Database Database Description

  12. SeedStor: A Germplasm Information Management System and Public Database.

    Science.gov (United States)

    Horler, R S P; Turner, A S; Fretter, P; Ambrose, M

    2018-01-01

    SeedStor (https://www.seedstor.ac.uk) acts as the publicly available database for the seed collections held by the Germplasm Resources Unit (GRU) based at the John Innes Centre, Norwich, UK. The GRU is a national capability supported by the Biotechnology and Biological Sciences Research Council (BBSRC). The GRU curates germplasm collections of a range of temperate cereal, legume and Brassica crops and their associated wild relatives, as well as precise genetic stocks, near-isogenic lines and mapping populations. With >35,000 accessions, the GRU forms part of the UK's plant conservation contribution to the Multilateral System (MLS) of the International Treaty for Plant Genetic Resources for Food and Agriculture (ITPGRFA) for wheat, barley, oat and pea. SeedStor is a fully searchable system that allows our various collections to be browsed species by species through to complicated multipart phenotype criteria-driven queries. The results from these searches can be downloaded for later analysis or used to order germplasm via our shopping cart. The user community for SeedStor is the plant science research community, plant breeders, specialist growers, hobby farmers and amateur gardeners, and educationalists. Furthermore, SeedStor is much more than a database; it has been developed to act internally as a Germplasm Information Management System that allows team members to track and process germplasm requests, determine regeneration priorities, handle cost recovery and Material Transfer Agreement paperwork, manage the Seed Store holdings and easily report on a wide range of the aforementioned tasks. © The Author(s) 2017. Published by Oxford University Press on behalf of Japanese Society of Plant Physiologists.

  13. Informing Evidence Based Decisions: Usage Statistics for Online Journal Databases

    Directory of Open Access Journals (Sweden)

    Alexei Botchkarev

    2017-06-01

    Full Text Available Abstract Objective – The primary objective was to examine online journal database usage statistics for a provincial ministry of health in the context of evidence based decision-making. In addition, the study highlights implementation of the Journal Access Centre (JAC that is housed and powered by the Ontario Ministry of Health and Long-Term Care (MOHLTC to inform health systems policy-making. Methods – This was a prospective case study using descriptive analysis of the JAC usage statistics of journal articles from January 2009 to September 2013. Results – JAC enables ministry employees to access approximately 12,000 journals with full-text articles. JAC usage statistics for the 2011-2012 calendar years demonstrate a steady level of activity in terms of searches, with monthly averages of 5,129. In 2009-2013, a total of 4,759 journal titles were accessed including 1,675 journals with full-text. Usage statistics demonstrate that the actual consumption was over 12,790 full-text downloaded articles or approximately 2,700 articles annually. Conclusion – JAC’s steady level of activities, revealed by the study, reflects continuous demand for JAC services and products. It testifies that access to online journal databases has become part of routine government knowledge management processes. MOHLTC’s broad area of responsibilities with dynamically changing priorities translates into the diverse information needs of its employees and a large set of required journals. Usage statistics indicate that MOHLTC information needs cannot be mapped to a reasonably compact set of “core” journals with a subsequent subscription to those.

  14. search GenBank: interactive orchestration and ad-hoc choreography of Web services in the exploration of the biomedical resources of the National Center For Biotechnology Information.

    Science.gov (United States)

    Mrozek, Dariusz; Małysiak-Mrozek, Bożena; Siążnik, Artur

    2013-03-01

    Due to the growing number of biomedical entries in data repositories of the National Center for Biotechnology Information (NCBI), it is difficult to collect, manage and process all of these entries in one place by third-party software developers without significant investment in hardware and software infrastructure, its maintenance and administration. Web services allow development of software applications that integrate in one place the functionality and processing logic of distributed software components, without integrating the components themselves and without integrating the resources to which they have access. This is achieved by appropriate orchestration or choreography of available Web services and their shared functions. After the successful application of Web services in the business sector, this technology can now be used to build composite software tools that are oriented towards biomedical data processing. We have developed a new tool for efficient and dynamic data exploration in GenBank and other NCBI databases. A dedicated search GenBank system makes use of NCBI Web services and a package of Entrez Programming Utilities (eUtils) in order to provide extended searching capabilities in NCBI data repositories. In search GenBank users can use one of the three exploration paths: simple data searching based on the specified user's query, advanced data searching based on the specified user's query, and advanced data exploration with the use of macros. search GenBank orchestrates calls of particular tools available through the NCBI Web service providing requested functionality, while users interactively browse selected records in search GenBank and traverse between NCBI databases using available links. On the other hand, by building macros in the advanced data exploration mode, users create choreographies of eUtils calls, which can lead to the automatic discovery of related data in the specified databases. search GenBank extends standard capabilities of the

  15. Databases

    Directory of Open Access Journals (Sweden)

    Nick Ryan

    2004-01-01

    Full Text Available Databases are deeply embedded in archaeology, underpinning and supporting many aspects of the subject. However, as well as providing a means for storing, retrieving and modifying data, databases themselves must be a result of a detailed analysis and design process. This article looks at this process, and shows how the characteristics of data models affect the process of database design and implementation. The impact of the Internet on the development of databases is examined, and the article concludes with a discussion of a range of issues associated with the recording and management of archaeological data.

  16. TIDBIT - the INEL database of BNCT information and treatment

    International Nuclear Information System (INIS)

    Mancuso, C.A.

    1995-01-01

    The INEL Database of BNCT Information and Treatment (TIDBIT) has been under development for several years. Late in 1993, a new software development team took over the project and did and assessment of the current implementation status, and determined that the user interface was unsatisfactory for the expected users and that the data structures were out of step with the current state of reality. The team evaluated several tools that would improve the user interface to make the system easier to use. Uniface turned out to be the product of choice. During 1994, TIDBIT got its name, underwent a complete change of appearance, had a major overhaul to the data structures that support the application, and system documentation was begun. A prototype of the system was demonstrated in September 1994

  17. Multigenerational information: the example of the Icelandic Genealogy Database.

    Science.gov (United States)

    Tulinius, Hrafn

    2011-01-01

    The first part of the chapter describes the Icelandic Genealogical Database, how it was created, what it contains, and how it operates. In the second part, an overview of research accomplished with material from the database is given.

  18. Improved Information Retrieval Performance on SQL Database Using Data Adapter

    Science.gov (United States)

    Husni, M.; Djanali, S.; Ciptaningtyas, H. T.; Wicaksana, I. G. N. A.

    2018-02-01

    The NoSQL databases, short for Not Only SQL, are increasingly being used as the number of big data applications increases. Most systems still use relational databases (RDBs), but as the number of data increases each year, the system handles big data with NoSQL databases to analyze and access data more quickly. NoSQL emerged as a result of the exponential growth of the internet and the development of web applications. The query syntax in the NoSQL database differs from the SQL database, therefore requiring code changes in the application. Data adapter allow applications to not change their SQL query syntax. Data adapters provide methods that can synchronize SQL databases with NotSQL databases. In addition, the data adapter provides an interface which is application can access to run SQL queries. Hence, this research applied data adapter system to synchronize data between MySQL database and Apache HBase using direct access query approach, where system allows application to accept query while synchronization process in progress. From the test performed using data adapter, the results obtained that the data adapter can synchronize between SQL databases, MySQL, and NoSQL database, Apache HBase. This system spends the percentage of memory resources in the range of 40% to 60%, and the percentage of processor moving from 10% to 90%. In addition, from this system also obtained the performance of database NoSQL better than SQL database.

  19. Information literacy skills and accessibility of databases among ...

    African Journals Online (AJOL)

    Previous researches on the accessibility of Databases by Undergraduate Students of Umaru Musa Yar'adua University (UMYU) have found out that there was low level of accessibility of library databases. This paper investigates the further factors of the accessibility of databases among Undergraduate Students of Umaru ...

  20. A database for coconut crop improvement.

    Science.gov (United States)

    Rajagopal, Velamoor; Manimekalai, Ramaswamy; Devakumar, Krishnamurthy; Rajesh; Karun, Anitha; Niral, Vittal; Gopal, Murali; Aziz, Shamina; Gunasekaran, Marimuthu; Kumar, Mundappurathe Ramesh; Chandrasekar, Arumugam

    2005-12-08

    Coconut crop improvement requires a number of biotechnology and bioinformatics tools. A database containing information on CG (coconut germplasm), CCI (coconut cultivar identification), CD (coconut disease), MIFSPC (microbial information systems in plantation crops) and VO (vegetable oils) is described. The database was developed using MySQL and PostgreSQL running in Linux operating system. The database interface is developed in PHP, HTML and JAVA. http://www.bioinfcpcri.org.

  1. A Case for Teaching Biotechnology

    Science.gov (United States)

    Lazaros, Edward; Embree, Caleb

    2016-01-01

    Biotechnology is an innovative field that is consistently growing in popularity. It is important that students are taught about this technology at an early age, so they are motivated to join the field, or at least motivated to become informed citizens and consumers (Gonzalez, et al, 2013). An increase in biotechnology knowledge can result in an…

  2. Large-scale Health Information Database and Privacy Protection*1

    OpenAIRE

    YAMAMOTO, Ryuichi

    2016-01-01

    Japan was once progressive in the digitalization of healthcare fields but unfortunately has fallen behind in terms of the secondary use of data for public interest. There has recently been a trend to establish large-scale health databases in the nation, and a conflict between data use for public interest and privacy protection has surfaced as this trend has progressed. Databases for health insurance claims or for specific health checkups and guidance services were created according to the law...

  3. Biotechnology bibliographies

    Energy Technology Data Exchange (ETDEWEB)

    Beaudette, L.A.; McCready, R.G.L.

    1986-01-01

    This bibliography consists of articles and scientific papers on biotechnology in areas in which BIOMINET is currently involved. The reports are categorized in four areas: 1) acid mine drainage (coals and metals) and bioadsorption of metals; 2) solution mining; 3) metabolism and physiology of Thiobacillus and other microorganisms; and 4) bacterial leaching of metals.

  4. [Biotechnology's macroeconomic impact].

    Science.gov (United States)

    Dones Tacero, Milagros; Pérez García, Julián; San Román, Antonio Pulido

    2008-12-01

    This paper tries to yield an economic valuation of biotechnological activities in terms of aggregated production and employment. This valuation goes beyond direct estimation and includes the indirect effects derived from sectorial linkages between biotechnological activities and the rest of economic system. To deal with the proposed target several sources of data have been used, including official data from National Statistical Office (INE) such us national accounts, input-output tables, and innovation surveys, as well as, firms' level balance sheets and income statements and also specific information about research projects compiled by Genoma Spain Foundation. Methodological approach is based on the estimation of a new input-output table which includes the biotechnological activities as a specific branch. This table offers both the direct impact of these activities and the main parameters to obtain the induced effects over the rest of the economic system. According to the most updated available figures, biotechnological activities would have directly generated almost 1,600 millions of euros in 2005, and they would be employed more than 9,000 workers. But if we take into account the full linkages with the rest of the system, the macroeconomic impact of Biotechnological activities would reach around 5,000 millions euros in production terms (0.6% of total GDP) and would be responsible, directly or indirectly, of more than 44,000 employments.

  5. Biotechnology in diagnostics

    International Nuclear Information System (INIS)

    Koprowski, H.; Ferrone, S.; Albertini, A.

    1985-01-01

    In recent years much progress has been made in the area of biotechnology. The cellular and molecular cloning methodology to develop monoclonal antibodies and DNA probes have been extensively utilized in basic and clinical research. These investigations have provided the necessary information to apply these reagents to diagnostic problems. The RIA 85 meeting focused on the application of monoclonal antibodies and DNA probes in laboratory medicine. The papers presented at this meeting clearly indicate that biotechnology has already had a significant impact on clinical medicine. (Auth.)

  6. Databases in Indian biology: The state of the art and prospects

    Digital Repository Service at National Institute of Oceanography (India)

    Chavan, V.S.; Chandramohan, D.

    the Indian biology and biotechnology databses and their relation to international databases on the subject. It highlights their limitations and throws more light on their potential for subject experts and information managers in the country to build...

  7. 24 CFR 81.72 - Public-use database and public information.

    Science.gov (United States)

    2010-04-01

    ... 24 Housing and Urban Development 1 2010-04-01 2010-04-01 false Public-use database and public... Public-use database and public information. (a) General. Except as provided in paragraph (c) of this section, the Secretary shall establish and make available for public use, a public-use database containing...

  8. Development of biotechnology in India.

    Science.gov (United States)

    Ghose, T K; Bisaria, V S

    2000-01-01

    technology, industrial biotechnology, biochemical engineering and associated activities such as creation of biotechnology information system and national repositories. Current status of intellectual property rights has also been discussed. Contribution to the India's advances in biotechnology by the industry, excepting a limited few, has been far below expectations. The review concludes with some cautious notes.

  9. Information retrieval system of nuclear power plant database (PPD) user's guide

    International Nuclear Information System (INIS)

    Izumi, Fumio; Horikami, Kunihiko; Kobayashi, Kensuke.

    1990-12-01

    A nuclear power plant database (PPD) and its retrieval system have been developed. The database involves a large number of safety design data of nuclear power plants, operating and planned in Japan. The information stored in the database can be retrieved at high speed, whenever they are needed, by use of the retrieval system. The report is a user's manual of the system to access the database utilizing a display unit of the JAERI computer network system. (author)

  10. 16th East-European Conference on Advances in Databases and Information Systems (ADBIS 2012)

    CERN Document Server

    Härder, Theo; Wrembel, Robert; Advances in Databases and Information Systems

    2013-01-01

    This volume is the second one of the 16th East-European Conference on Advances in Databases and Information Systems (ADBIS 2012), held on September 18-21, 2012, in Poznań, Poland. The first one has been published in the LNCS series.   This volume includes 27 research contributions, selected out of 90. The contributions cover a wide spectrum of topics in the database and information systems field, including: database foundation and theory, data modeling and database design, business process modeling, query optimization in relational and object databases, materialized view selection algorithms, index data structures, distributed systems, system and data integration, semi-structured data and databases, semantic data management, information retrieval, data mining techniques, data stream processing, trust and reputation in the Internet, and social networks. Thus, the content of this volume covers the research areas from fundamentals of databases, through still hot topic research problems (e.g., data mining, XML ...

  11. Avian Biotechnology.

    Science.gov (United States)

    Nakamura, Yoshiaki

    2017-01-01

    Primordial germ cells (PGCs) generate new individuals through differentiation, maturation and fertilization. This means that the manipulation of PGCs is directly linked to the manipulation of individuals, making PGCs attractive target cells in the animal biotechnology field. A unique biological property of avian PGCs is that they circulate temporarily in the vasculature during early development, and this allows us to access and manipulate avian germ lines. Following the development of a technique for transplantation, PGCs have become central to avian biotechnology, in contrast to the use of embryo manipulation and subsequent transfer to foster mothers, as in mammalian biotechnology. Today, avian PGC transplantation combined with recent advanced manipulation techniques, including cell purification, cryopreservation, depletion, and long-term culture in vitro, have enabled the establishment of genetically modified poultry lines and ex-situ conservation of poultry genetic resources. This chapter introduces the principles, history, and procedures of producing avian germline chimeras by transplantation of PGCs, and the current status of avian germline modification as well as germplasm cryopreservation. Other fundamental avian reproductive technologies are described, including artificial insemination and embryo culture, and perspectives of industrial applications in agriculture and pharmacy are considered, including poultry productivity improvement, egg modification, disease resistance impairment and poultry gene "pharming" as well as gene banking.

  12. Information flow in the DAMA project beyond database managers: information flow managers

    Science.gov (United States)

    Russell, Lucian; Wolfson, Ouri; Yu, Clement

    1996-12-01

    To meet the demands of commercial data traffic on the information highway, a new look at managing data is necessary. One projected activity, sharing of point of sale information, is being considered in the Demand Activated Manufacturing Project (DAMA) of the American Textile Partnership (AMTEX) project. A scenario is examined in which 100 000 retail outlets communicate over a period of days. They provide the latest estimate of demand for sewn products across a chain of 26 000 suppliers through the use of bill of materials explosions at four levels of detail. Enabling this communication requires an approach that shares common features with both workflows and database management. A new paradigm, the information flow manager, is developed to handle this situation, including the case where members of the supply chain fail to communicate and go out of business. Techniques for approximation are introduced so as to keep estimates of demand as current as possible.

  13. Ebolavirus Database: Gene and Protein Information Resource for Ebolaviruses

    Directory of Open Access Journals (Sweden)

    Rayapadi G. Swetha

    2016-01-01

    Full Text Available Ebola Virus Disease (EVD is a life-threatening haemorrhagic fever in humans. Even though there are many reports on EVD, the protein precursor functions and virulent factors of ebolaviruses remain poorly understood. Comparative analyses of Ebolavirus genomes will help in the identification of these important features. This prompted us to develop the Ebolavirus Database (EDB and we have provided links to various tools that will aid researchers to locate important regions in both the genomes and proteomes of Ebolavirus. The genomic analyses of ebolaviruses will provide important clues for locating the essential and core functional genes. The aim of EDB is to act as an integrated resource for ebolaviruses and we strongly believe that the database will be a useful tool for clinicians, microbiologists, health care workers, and bioscience researchers.

  14. The implementation of nuclear knowledge information infra database

    Energy Technology Data Exchange (ETDEWEB)

    Kang, Shin Bok; Hwang, In Ah [Korea Atomic Energy Research Institute, Taejeon (Korea)

    2001-02-01

    The purpose of this research is to develop DB for establishing knowledge management DB, which will be effectively utilized for carrying out nuclear R and D program. This report describes detailed methodology for data retrieval, classification, acquisition, accumulation, common ownership and regeneration of professional knowledge. An example of knowledge DB construction in the field of nuclear energy is illustrated in the report. This project is supported by a part of digital information program related to science and technology. The total of 894 man year (3 man per day) is invested in this project. Major works carried out in this project are design of DB field for nuclear knowledge base, classification and selection of knowledge information information, review of classified and selected information, preparation of information DB, and so on. As a result of this project, the developed DB for nuclear knowledge information infrastructure will serve as a valuable source of information to the nuclear researchers and information users. (Author)

  15. A Parallel Relational Database Management System Approach to Relevance Feedback in Information Retrieval.

    Science.gov (United States)

    Lundquist, Carol; Frieder, Ophir; Holmes, David O.; Grossman, David

    1999-01-01

    Describes a scalable, parallel, relational database-drive information retrieval engine. To support portability across a wide range of execution environments, all algorithms adhere to the SQL-92 standard. By incorporating relevance feedback algorithms, accuracy is enhanced over prior database-driven information retrieval efforts. Presents…

  16. 18th East European Conference on Advances in Databases and Information Systems and Associated Satellite Events

    CERN Document Server

    Ivanovic, Mirjana; Kon-Popovska, Margita; Manolopoulos, Yannis; Palpanas, Themis; Trajcevski, Goce; Vakali, Athena

    2015-01-01

    This volume contains the papers of 3 workshops and the doctoral consortium, which are organized in the framework of the 18th East-European Conference on Advances in Databases and Information Systems (ADBIS’2014). The 3rd International Workshop on GPUs in Databases (GID’2014) is devoted to subjects related to utilization of Graphics Processing Units in database environments. The use of GPUs in databases has not yet received enough attention from the database community. The intention of the GID workshop is to provide a discussion on popularizing the GPUs and providing a forum for discussion with respect to the GID’s research ideas and their potential to achieve high speedups in many database applications. The 3rd International Workshop on Ontologies Meet Advanced Information Systems (OAIS’2014) has a twofold objective to present: new and challenging issues in the contribution of ontologies for designing high quality information systems, and new research and technological developments which use ontologie...

  17. Methodology for Automatic Ontology Generation Using Database Schema Information

    Directory of Open Access Journals (Sweden)

    JungHyen An

    2018-01-01

    Full Text Available An ontology is a model language that supports the functions to integrate conceptually distributed domain knowledge and infer relationships among the concepts. Ontologies are developed based on the target domain knowledge. As a result, methodologies to automatically generate an ontology from metadata that characterize the domain knowledge are becoming important. However, existing methodologies to automatically generate an ontology using metadata are required to generate the domain metadata in a predetermined template, and it is difficult to manage data that are increased on the ontology itself when the domain OWL (Ontology Web Language individuals are continuously increased. The database schema has a feature of domain knowledge and provides structural functions to efficiently process the knowledge-based data. In this paper, we propose a methodology to automatically generate ontologies and manage the OWL individual through an interaction of the database and the ontology. We describe the automatic ontology generation process with example schema and demonstrate the effectiveness of the automatically generated ontology by comparing it with existing ontologies using the ontology quality score.

  18. Advances in probabilistic databases for uncertain information management

    CERN Document Server

    Yan, Li

    2013-01-01

    This book covers a fast-growing topic in great depth and focuses on the technologies and applications of probabilistic data management. It aims to provide a single account of current studies in probabilistic data management. The objective of the book is to provide the state of the art information to researchers, practitioners, and graduate students of information technology of intelligent information processing, and at the same time serving the information technology professional faced with non-traditional applications that make the application of conventional approaches difficult or impossible.

  19. 7th Asian Conference on Intelligent Information and Database Systems (ACIIDS 2015)

    CERN Document Server

    Nguyen, Ngoc; Batubara, John; New Trends in Intelligent Information and Database Systems

    2015-01-01

    Intelligent information and database systems are two closely related subfields of modern computer science which have been known for over thirty years. They focus on the integration of artificial intelligence and classic database technologies to create the class of next generation information systems. The book focuses on new trends in intelligent information and database systems and discusses topics addressed to the foundations and principles of data, information, and knowledge models, methodologies for intelligent information and database systems analysis, design, and implementation, their validation, maintenance and evolution. They cover a broad spectrum of research topics discussed both from the practical and theoretical points of view such as: intelligent information retrieval, natural language processing, semantic web, social networks, machine learning, knowledge discovery, data mining, uncertainty management and reasoning under uncertainty, intelligent optimization techniques in information systems, secu...

  20. Biotechnology in Turkey: an overview.

    Science.gov (United States)

    Ozdamar, Tunçer H

    2009-07-01

    The term biotechnology first appeared in the programs of the Scientific and Technological Research Council of Turkey (TUBITAK) in 1982. The State Planning Organization (SPO) in 1988 defined biotechnology and the scientific fields. Moreover, it put forward an institutional framework and suggested priority areas for research and development. Turkey has been researching and investing in biotechnology for almost four decades. This review covers the development of science and technology policy with its history, consensus and consequences, bio-industries in Turkey, and research activities in biotechnology at Turkish Universities. Details are provided by the research groups in response to a common request for information on their activities and major publications in the field. The information provided has been grouped under thematic topics within the broad theme of biotechnology, and summarized within these topics. Although many aspects of biotechnological research are being pursued in Turkey, it appears that the most common research activities of the field are in fermentation processes, environmental biotechnology, and biomedical engineering.

  1. 75 FR 76831 - Publicly Available Consumer Product Safety Information Database

    Science.gov (United States)

    2010-12-09

    ... information as evidenced by their verification that they have done so. We also note that reports of harm... ``Others'' file reports of harm with us using our online incident reporting form by self-reporting as... requirements for verification of information it intends to make public. Response--Congress provided a clear...

  2. Information systems in radiation protection: the INIS database

    International Nuclear Information System (INIS)

    Alberdi Larranaga, I.; Marco Arboli, M.

    2011-01-01

    INIS provides a comprehensive service references on literature information on radiation protection (RP), nuclear science and technology, medicine, etc.., Processing most of the world's scientific and technical literature in the area to meet the information needs international community in the areas of interest of the IAEA and the activities related to peaceful use of nuclear science and technology.

  3. Screening Information - JSNP | LSDB Archive [Life Science Database Archive metadata

    Lifescience Database Archive (English)

    Full Text Available List Contact us JSNP Screening Information Data detail Data name Screening Information DOI 10.18908/lsdba.nb...dc00114-003 Description of data contents Information from polymorphism screening experiments. Derived from E...the sequence for polymorphism screening Screened Position position of the polymorphism in the sequence for polymorphism screeni...ng Screened Symbol gene name related to the sequence for polymorphism screening Screened ...OMIM-ID OMIM ID related to the sequence for polymorphism screening About This Dat

  4. Field validation of food service listings: a comparison of commercial and online geographic information system databases.

    Science.gov (United States)

    Seliske, Laura; Pickett, William; Bates, Rebecca; Janssen, Ian

    2012-08-01

    Many studies examining the food retail environment rely on geographic information system (GIS) databases for location information. The purpose of this study was to validate information provided by two GIS databases, comparing the positional accuracy of food service places within a 1 km circular buffer surrounding 34 schools in Ontario, Canada. A commercial database (InfoCanada) and an online database (Yellow Pages) provided the addresses of food service places. Actual locations were measured using a global positioning system (GPS) device. The InfoCanada and Yellow Pages GIS databases provided the locations for 973 and 675 food service places, respectively. Overall, 749 (77.1%) and 595 (88.2%) of these were located in the field. The online database had a higher proportion of food service places found in the field. The GIS locations of 25% of the food service places were located within approximately 15 m of their actual location, 50% were within 25 m, and 75% were within 50 m. This validation study provided a detailed assessment of errors in the measurement of the location of food service places in the two databases. The location information was more accurate for the online database, however, when matching criteria were more conservative, there were no observed differences in error between the databases.

  5. Stemcell Information: SKIP000675 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available llular and Molecular Medicine, Children's Hospital Boston Immune Disease Institute, Program in Cellular and Molecular Medicine, Child...ren's Hospital Boston Derrick J. Rossi Derrick J. Rossi Information Only ... 208

  6. International Marine Biotechnology Culture Collection (IMBCC)

    Energy Technology Data Exchange (ETDEWEB)

    Zaborsky, O.R.; Baker, K. [Univ. of Hawaii at Manoa, Honolulu, HI (United States)

    1996-10-01

    The objective of this project is to establish a premier culture collection of tropical marine microorganisms able to generate hydrogen from water or organic substances. Both eukaryotic and prokaryotic microorganisms will serve as the biological reservoir or {open_quotes}library{close_quotes} for other DOE Hydrogen Program contractors, the biohydrogen research community and industry. This project consists of several tasks: (a) transfer of the Mitsui-Miami strains to Hawaii`s International Marine Biotechnology Culture Collection (IMBCC) housed at the Hawaii Natural Energy Institute (HNEI); (b) maintain and distribute Mitsui-Miami strains; (c) characterize key strains by traditional and advanced biotechnological techniques; (d) expand Hawaii`s IMBCC; and (e) establish and operate an information resource (database). The project was initiated only late in the summer of 1995 but progress has been made on all tasks. Of the 161 cyanobacterial strains imported, 147 survived storage and importation and 145 are viable. with most exhibiting growth. Of the 406 strains of other photosynthetic bacteria imported, 392 survived storage and importation and 353 are viable, with many exhibiting growth. This project is linked to cooperative efforts being supported by the Japanese Ministry of International Trade and Industry (MITI) through its Marine Biotechnology Institute (MBI) and Research Institute of Innovative Technology for the Earth (RITE).

  7. Information structure design for databases a practical guide to data modelling

    CERN Document Server

    Mortimer, Andrew J

    2014-01-01

    Computer Weekly Professional Series: Information Structure Design for Databases: A Practical Guide to Data modeling focuses on practical data modeling covering business and information systems. The publication first offers information on data and information, business analysis, and entity relationship model basics. Discussions cover degree of relationship symbols, relationship rules, membership markers, types of information systems, data driven systems, cost and value of information, importance of data modeling, and quality of information. The book then takes a look at entity relationship mode

  8. A Database of Historical Information on Landslides and Floods in Italy

    Science.gov (United States)

    Guzzetti, F.; Tonelli, G.

    2003-04-01

    For the past 12 years we have maintained and updated a database of historical information on landslides and floods in Italy, known as the National Research Council's AVI (Damaged Urban Areas) Project archive. The database was originally designed to respond to a specific request of the Minister of Civil Protection, and was aimed at helping the regional assessment of landslide and flood risk in Italy. The database was first constructed in 1991-92 to cover the period 1917 to 1990. Information of damaging landslide and flood event was collected by searching archives, by screening thousands of newspaper issues, by reviewing the existing technical and scientific literature on landslides and floods in Italy, and by interviewing landslide and flood experts. The database was then updated chiefly through the analysis of hundreds of newspaper articles, and it now covers systematically the period 1900 to 1998, and non-systematically the periods 1900 to 1916 and 1999 to 2002. Non systematic information on landslide and flood events older than 20th century is also present in the database. The database currently contains information on more than 32,000 landslide events occurred at more than 25,700 sites, and on more than 28,800 flood events occurred at more than 15,600 sites. After a brief outline of the history and evolution of the AVI Project archive, we present and discuss: (a) the present structure of the database, including the hardware and software solutions adopted to maintain, manage, use and disseminate the information stored in the database, (b) the type and amount of information stored in the database, including an estimate of its completeness, and (c) examples of recent applications of the database, including a web-based GIS systems to show the location of sites historically affected by landslides and floods, and an estimate of geo-hydrological (i.e., landslide and flood) risk in Italy based on the available historical information.

  9. Stemcell Information: SKIP000514 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available 岡野 栄之 Department of Physiology, Keio University School of Medicine 慶應義塾大学 医学部 生理学教室 Department of Physiology..., Keio University School of Medicine 慶應義塾大学 医学部 生理学教室 Hideyuki Okano 岡野 栄之 Inform...ation Only Department of Physiology, Keio University School of Medicine 慶應義塾大学 医学部 生理学教室 ... 23039195--2493

  10. Stemcell Information: SKIP000302 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available ... Information Only ... 23472874 10.1016/j.stem.2013.01.008 Genetic correction of a LRRK2 mutation in human iPSCs links parkinso... SKIP000302 ... Diseased L2-3GC L2-3GC ... パーキンソン病 G20 Parkinson's disease 607060 ...

  11. Stemcell Information: SKIP000672 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available lar and Molecular Medicine, Children's Hospital Boston Immune Disease Institute, ...Program in Cellular and Molecular Medicine, Children's Hospital Boston Derrick J. Rossi Derrick J. Rossi Inf...ormation Only Immune Disease Institute, Program in Cellular and Molecular Medicine, Children's Hospital Bost...on Immune Disease Institute, Program in Cellular and Molecular Medicine, Children's Hospital Boston ... 208

  12. Stemcell Information: SKIP000691 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available te, Program in Cellular and Molecular Medicine, Children's Hospital Boston Immune Disease Institute, Program... in Cellular and Molecular Medicine, Children's Hospital Boston Derrick J. Rossi ...Derrick J. Rossi Information Only Immune Disease Institute, Program in Cellular and Molecular Medicine, Children...'s Hospital Boston Immune Disease Institute, Program in Cellular and Molecular Medicine, Children's Hosp

  13. Stemcell Information: SKIP000690 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available , Program in Cellular and Molecular Medicine, Children's Hospital Boston Immune Disease Institute, Program i...n Cellular and Molecular Medicine, Children's Hospital Boston Derrick J. Rossi De...rrick J. Rossi Information Only Immune Disease Institute, Program in Cellular and Molecular Medicine, Children...'s Hospital Boston Immune Disease Institute, Program in Cellular and Molecular Medicine, Children's Hospit

  14. Stemcell Information: SKIP000673 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available ular and Molecular Medicine, Children's Hospital Boston Immune Disease Institute,... Program in Cellular and Molecular Medicine, Children's Hospital Boston Derrick J. Rossi Derrick J. Rossi In...formation Only Immune Disease Institute, Program in Cellular and Molecular Medicine, Children's Hospital Bos...ton Immune Disease Institute, Program in Cellular and Molecular Medicine, Children's Hospital Boston ... 20

  15. Stemcell Information: SKIP000692 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available ... Immune Disease Institute, Program in Cellular and Molecular Medicine, Children's Hospital Boston Immune Di...sease Institute, Program in Cellular and Molecular Medicine, Children's Hospital ...ren's Hospital Boston Immune Disease Institute, Program in Cellular and Molecular Medicine, Children...Boston Derrick J. Rossi Derrick J. Rossi Information Only Immune Disease Institute, Program in Cellular and Molecular Medicine, Child

  16. Stemcell Information: SKIP000680 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available am in Cellular and Molecular Medicine, Children's Hospital Boston Immune Disease Institute, Program in Cellu...lar and Molecular Medicine, Children's Hospital Boston Derrick J. Rossi Derrick J.... Rossi Information Only Immune Disease Institute, Program in Cellular and Molecular Medicine, Children's Ho...spital Boston Immune Disease Institute, Program in Cellular and Molecular Medicine, Children's Hospital Bost

  17. Stemcell Information: SKIP000579 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available asic fibroblast growth factor) ... Yes ... No ... Yes teratoma formation ... No ... Department of Cardi...ology,Keio University School of Medicine 慶應義塾大学医学部循環器内科 Shinsuke Yuasa 湯浅 慎介 Inform

  18. Stemcell Information: SKIP000697 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available Southern blot analysis Yes ... Rudolf Jaenisch Rudolf Jaenisch Whitehead Institute for Biomedical Research W...hitehead Institute for Biomedical Research Whitehead Institute for Biomedical Research Whitehead Institute for Biomedical... Research Rudolf Jaenisch Rudolf Jaenisch Information Only Whitehead Institute for Biomedical R...esearch Whitehead Institute for Biomedical Research ... 24936472 10.1016/j.stemc

  19. Stemcell Information: SKIP000979 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available ot analysis Yes ... Yes qRT-PCR Rudolf Jaenisch Rudolf Jaenisch Whitehead Institute for Biomedical... Research Whitehead Institute for Biomedical Research Whitehead Institute for Biomedical Resea...rch Whitehead Institute for Biomedical Research Rudolf Jaenisch Rudolf Jaenisch Information Only Whitehead Institute for Biomedical... Research Whitehead Institute for Biomedical Research ... 24936472 10.1016/j.stemcr.

  20. Stemcell Information: SKIP000983 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available RT-PCR Rudolf Jaenisch Rudolf Jaenisch Whitehead Institute for Biomedical Researc...h Whitehead Institute for Biomedical Research Whitehead Institute for Biomedical Research Whitehead Institute for Biomedical... Research Rudolf Jaenisch Rudolf Jaenisch Information Only Whitehead Institute for Biomedical... Research Whitehead Institute for Biomedical Research ... 24936472 10.1016/j.st

  1. Stemcell Information: SKIP000975 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available Jaenisch Rudolf Jaenisch Whitehead Institute for Biomedical Research Whitehead Institute for Biomedical Rese...arch Whitehead Institute for Biomedical Research Whitehead Institute for Biomedical Research Rudolf Jaenisch... Rudolf Jaenisch Information Only Whitehead Institute for Biomedical Research Whi...tehead Institute for Biomedical Research ... 24936472 10.1016/j.stemcr.2014.03.014 Genetic and chemical cor

  2. Stemcell Information: SKIP000694 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available outhern blot analysis Yes ... Rudolf Jaenisch Rudolf Jaenisch Whitehead Institute for Biomedical Research Whi...tehead Institute for Biomedical Research Whitehead Institute for Biomedical Research Whitehead Institute for Biomedical... Research Rudolf Jaenisch Rudolf Jaenisch Information Only Whitehead Institute for Biomedical Res...earch Whitehead Institute for Biomedical Research ... 24936472 10.1016/j.stemcr.

  3. Stemcell Information: SKIP000698 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available lf Jaenisch Whitehead Institute for Biomedical Research Whitehead Institute for Biomedical Research Whitehead Institute for Biomedica...l Research Whitehead Institute for Biomedical Research R...udolf Jaenisch Rudolf Jaenisch Information Only Whitehead Institute for Biomedical Research Whitehead Institute for Biomedical

  4. Stemcell Information: SKIP000696 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available outhern blot analysis Yes ... Rudolf Jaenisch Rudolf Jaenisch Whitehead Institute for Biomedical Research Whi...tehead Institute for Biomedical Research Whitehead Institute for Biomedical Research Whitehead Institute for Biomedical... Research Rudolf Jaenisch Rudolf Jaenisch Information Only Whitehead Institute for Biomedical Res...earch Whitehead Institute for Biomedical Research ... 24936472 10.1016/j.stemcr.

  5. Stemcell Information: SKIP000699 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available lf Jaenisch Whitehead Institute for Biomedical Research Whitehead Institute for Biomedical Research Whitehead Institute for Biomedica...l Research Whitehead Institute for Biomedical Research R...udolf Jaenisch Rudolf Jaenisch Information Only Whitehead Institute for Biomedical Research Whitehead Institute for Biomedical

  6. Stemcell Information: SKIP000977 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available qRT-PCR Rudolf Jaenisch Rudolf Jaenisch Whitehead Institute for Biomedical Research Whitehead Institute for Biomedical... Research Whitehead Institute for Biomedical Research Whitehead Institute for Biomedical Research ...Rudolf Jaenisch Rudolf Jaenisch Information Only Whitehead Institute for Biomedical... Research Whitehead Institute for Biomedical Research ... 24936472 10.1016/j.stemcr.2014.03.014 Genetic a

  7. Stemcell Information: SKIP000976 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available Jaenisch Rudolf Jaenisch Whitehead Institute for Biomedical Research Whitehead Institute for Biomedical Rese...arch Whitehead Institute for Biomedical Research Whitehead Institute for Biomedical Research Rudolf Jaenisch... Rudolf Jaenisch Information Only Whitehead Institute for Biomedical Research Whi...tehead Institute for Biomedical Research ... 24936472 10.1016/j.stemcr.2014.03.014 Genetic and chemical cor

  8. Stemcell Information: SKIP000981 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available RT-PCR Rudolf Jaenisch Rudolf Jaenisch Whitehead Institute for Biomedical Researc...h Whitehead Institute for Biomedical Research Whitehead Institute for Biomedical Research Whitehead Institute for Biomedical... Research Rudolf Jaenisch Rudolf Jaenisch Information Only Whitehead Institute for Biomedical... Research Whitehead Institute for Biomedical Research ... 24936472 10.1016/j.st

  9. Stemcell Information: SKIP000980 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available es ... Yes qRT-PCR Rudolf Jaenisch Rudolf Jaenisch Whitehead Institute for Biomedical... Research Whitehead Institute for Biomedical Research Whitehead Institute for Biomedical Research Whitehead Institute for Biomedical... Research Rudolf Jaenisch Rudolf Jaenisch Information Only Whitehead Institute for Biomedical... Research Whitehead Institute for Biomedical Research ... 24936472 10.1016/j.stemcr.2014.03.014 G

  10. Stemcell Information: SKIP000695 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available outhern blot analysis Yes ... Rudolf Jaenisch Rudolf Jaenisch Whitehead Institute for Biomedical Research Whi...tehead Institute for Biomedical Research Whitehead Institute for Biomedical Research Whitehead Institute for Biomedical... Research Rudolf Jaenisch Rudolf Jaenisch Information Only Whitehead Institute for Biomedical Res...earch Whitehead Institute for Biomedical Research ... 24936472 10.1016/j.stemcr.

  11. Stemcell Information: SKIP000700 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available lf Jaenisch Whitehead Institute for Biomedical Research Whitehead Institute for Biomedical Research Whitehead Institute for Biomedica...l Research Whitehead Institute for Biomedical Research R...udolf Jaenisch Rudolf Jaenisch Information Only Whitehead Institute for Biomedical Research Whitehead Institute for Biomedical

  12. Stemcell Information: SKIP000978 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available qRT-PCR Rudolf Jaenisch Rudolf Jaenisch Whitehead Institute for Biomedical Research Whitehead Institute for Biomedical... Research Whitehead Institute for Biomedical Research Whitehead Institute for Biomedical Research ...Rudolf Jaenisch Rudolf Jaenisch Information Only Whitehead Institute for Biomedical... Research Whitehead Institute for Biomedical Research ... 24936472 10.1016/j.stemcr.2014.03.014 Genetic a

  13. Stemcell Information: SKIP000912 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available ing ... Yes Teratoma formation ... Salvatore Iovino Salvatore Iovino Harvard Medical School Harvar...d Medical School Harvard Medical School Harvard Medical School C. Ronald Kahn C. Ro...nald Kahn Information Only Harvard Medical School Harvard Medical School ... 26831110 10.1073/pnas.15256651

  14. Stemcell Information: SKIP001065 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available boratory of Regenerative Biology, South China Institute for Stem Cell Biology and Regenerative Medicine Key ...Laboratory of Regenerative Biology, South China Institute for Stem Cell Biology a...nd Regenerative Medicine ... Information Only Key Laboratory of Regenerative Biology, South China Institute for Stem Cell Biology... and Regenerative Medicine Key Laboratory of Regenerative Biology, South China Institute for Stem Cell Biology

  15. Stemcell Information: SKIP000301 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available ... Information Only ... 23472874 10.1016/j.stem.2013.01.008 Genetic correction of a LRRK2 mutation in human iPSCs links parkinson... SKIP000301 ... Diseased L2-2GC L2-2GC ... パーキンソン病 G20 Parkinson's disease 607060 ...

  16. YAdumper: extracting and translating large information volumes from relational databases to structured flat files.

    Science.gov (United States)

    Fernández, José M; Valencia, Alfonso

    2004-10-12

    Downloading the information stored in relational databases into XML and other flat formats is a common task in bioinformatics. This periodical dumping of information requires considerable CPU time, disk and memory resources. YAdumper has been developed as a purpose-specific tool to deal with the integral structured information download of relational databases. YAdumper is a Java application that organizes database extraction following an XML template based on an external Document Type Declaration. Compared with other non-native alternatives, YAdumper substantially reduces memory requirements and considerably improves writing performance.

  17. Key Techniques for Dynamic Updating of National Fundamental Geographic Information Database

    Directory of Open Access Journals (Sweden)

    WANG Donghua

    2015-07-01

    Full Text Available One of the most important missions of fundamental surveying and mapping work is to keep the fundamental geographic information fresh. In this respect, National Administration of Surveying, Mapping and Geoinformation has launched the project of dynamic updating of national fundamental geographic information database since 2012, which aims to update 1:50 000, 1:250 000 and 1:1 000 000 national fundamental geographic information database continuously and quickly, by updating and publishing once a year. This paper introduces the general technical thinking of dynamic updating, states main technical methods, such as dynamic updating of fundamental database, linkage updating of derived databases, and multi-tense database management and service and so on, and finally introduces main technical characteristics and engineering applications.

  18. The IPE Database: providing information on plant design, core damage frequency and containment performance

    International Nuclear Information System (INIS)

    Lehner, J.R.; Lin, C.C.; Pratt, W.T.; Su, T.; Danziger, L.

    1996-01-01

    A database, called the IPE Database has been developed that stores data obtained from the Individual Plant Examinations (IPEs) which licensees of nuclear power plants have conducted in response to the Nuclear Regulatory Commission's (NRC) Generic Letter GL88-20. The IPE Database is a collection of linked files which store information about plant design, core damage frequency (CDF), and containment performance in a uniform, structured way. The information contained in the various files is based on data contained in the IPE submittals. The information extracted from the submittals and entered into the IPE Database can be manipulated so that queries regarding individual or groups of plants can be answered using the IPE Database

  19. Editorial: Biotechnology Journal brings more than biotechnology.

    Science.gov (United States)

    Jungbauer, Alois; Lee, Sang Yup

    2015-09-01

    Biotechnology Journal always brings the state-of-the-art biotechnologies to our readers. Different from other topical issues, this issue of Biotechnology Journal is complied with a series of exiting reviews and research articles from spontaneous submissions, again, addressing society's actual problems and needs. The progress is a real testimony how biotechnology contributes to achievements in healthcare, better utilization of resources, and a bio-based economy. Copyright © 2015 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

  20. A Reaction Database for Small Molecule Pharmaceutical Processes Integrated with Process Information

    Directory of Open Access Journals (Sweden)

    Emmanouil Papadakis

    2017-10-01

    Full Text Available This article describes the development of a reaction database with the objective to collect data for multiphase reactions involved in small molecule pharmaceutical processes with a search engine to retrieve necessary data in investigations of reaction-separation schemes, such as the role of organic solvents in reaction performance improvement. The focus of this reaction database is to provide a data rich environment with process information available to assist during the early stage synthesis of pharmaceutical products. The database is structured in terms of reaction classification of reaction types; compounds participating in the reaction; use of organic solvents and their function; information for single step and multistep reactions; target products; reaction conditions and reaction data. Information for reactor scale-up together with information for the separation and other relevant information for each reaction and reference are also available in the database. Additionally, the retrieved information obtained from the database can be evaluated in terms of sustainability using well-known “green” metrics published in the scientific literature. The application of the database is illustrated through the synthesis of ibuprofen, for which data on different reaction pathways have been retrieved from the database and compared using “green” chemistry metrics.

  1. Report on the first Twente Data Management Workshop on XML Databases and Information Retrieval

    NARCIS (Netherlands)

    Hiemstra, Djoerd; Mihajlovic, V.

    2004-01-01

    The Database Group of the University of Twente initiated a new series of workshops called Twente Data Management workshops (TDM), starting with one on XML Databases and Information Retrieval which took place on 21 June 2004 at the University of Twente. We have set ourselves two goals for the

  2. An Examination of Job Skills Posted on Internet Databases: Implications for Information Systems Degree Programs.

    Science.gov (United States)

    Liu, Xia; Liu, Lai C.; Koong, Kai S.; Lu, June

    2003-01-01

    Analysis of 300 information technology job postings in two Internet databases identified the following skill categories: programming languages (Java, C/C++, and Visual Basic were most frequent); website development (57% sought SQL and HTML skills); databases (nearly 50% required Oracle); networks (only Windows NT or wide-area/local-area networks);…

  3. An online database for informing ecological network models: http://kelpforest.ucsc.edu.

    Science.gov (United States)

    Beas-Luna, Rodrigo; Novak, Mark; Carr, Mark H; Tinker, Martin T; Black, August; Caselle, Jennifer E; Hoban, Michael; Malone, Dan; Iles, Alison

    2014-01-01

    Ecological network models and analyses are recognized as valuable tools for understanding the dynamics and resiliency of ecosystems, and for informing ecosystem-based approaches to management. However, few databases exist that can provide the life history, demographic and species interaction information necessary to parameterize ecological network models. Faced with the difficulty of synthesizing the information required to construct models for kelp forest ecosystems along the West Coast of North America, we developed an online database (http://kelpforest.ucsc.edu/) to facilitate the collation and dissemination of such information. Many of the database's attributes are novel yet the structure is applicable and adaptable to other ecosystem modeling efforts. Information for each taxonomic unit includes stage-specific life history, demography, and body-size allometries. Species interactions include trophic, competitive, facilitative, and parasitic forms. Each data entry is temporally and spatially explicit. The online data entry interface allows researchers anywhere to contribute and access information. Quality control is facilitated by attributing each entry to unique contributor identities and source citations. The database has proven useful as an archive of species and ecosystem-specific information in the development of several ecological network models, for informing management actions, and for education purposes (e.g., undergraduate and graduate training). To facilitate adaptation of the database by other researches for other ecosystems, the code and technical details on how to customize this database and apply it to other ecosystems are freely available and located at the following link (https://github.com/kelpforest-cameo/databaseui).

  4. Stemcell Information: SKIP000529 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available Linzhao Cheng Linzhao Cheng Stem Cell Program, Institute for Cell Engineering, and Department of Gynecology ...dicine Stem Cell Program, Institute for Cell Engineering, and Department of Gynecology & Obstetrics, Johns H...opkins University School of Medicine Stem Cell Program, Institute for Cell Engineering, and Department of Gynecology...Linzhao Cheng Information Only Stem Cell Program, Institute for Cell Engineering, and Department of Gynecology...ng, and Department of Gynecology & Obstetrics, Johns Hopkins University School of

  5. Stemcell Information: SKIP000531 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available ... Linzhao Cheng Linzhao Cheng Stem Cell Program, Institute for Cell Engineering, and Department of Gynecology...ing, and Department of Gynecology & Obstetrics, Johns Hopkins University School o...f Medicine Stem Cell Program, Institute for Cell Engineering, and Department of Gynecology & Obstetrics, Joh...ns Hopkins University School of Medicine Stem Cell Program, Institute for Cell Engineering, and Department of Gynecology...eng Linzhao Cheng Information Only Stem Cell Program, Institute for Cell Engineering, and Department of Gynecology

  6. Stemcell Information: SKIP000530 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available ... Linzhao Cheng Linzhao Cheng Stem Cell Program, Institute for Cell Engineering, and Department of Gynecology...ing, and Department of Gynecology & Obstetrics, Johns Hopkins University School o...f Medicine Stem Cell Program, Institute for Cell Engineering, and Department of Gynecology & Obstetrics, Joh...ns Hopkins University School of Medicine Stem Cell Program, Institute for Cell Engineering, and Department of Gynecology...eng Linzhao Cheng Information Only Stem Cell Program, Institute for Cell Engineering, and Department of Gynecology

  7. Stemcell Information: SKIP000666 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available bryoid body formation ... Yes qRT-PCR ... Immune Disease Institute, Program in Cellular and Molecular Medicine, Children...lular and Molecular Medicine, Children's Hospital Boston Derrick J. Rossi Derrick J. Rossi Information Only ...Immune Disease Institute, Program in Cellular and Molecular Medicine, Children's Hospital Boston Immune Dise...ase Institute, Program in Cellular and Molecular Medicine, Children's Hospital Boston ... 20888316--2136882

  8. Stemcell Information: SKIP000561 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available nnear Caroline Kinnear Department of Pediatrics|and dDevelopmental and|Stem Cell Biology, Hospital|for Sick Children..., University|of Toronto Department of Pediatricsand dDevelopmental andStem Cell Biology, Hospitalfor Sick Children...and|Stem Cell Biology, Hospital|for Sick Children, University|of Toronto Department of Pediatricsand dDevelo...pmental andStem Cell Biology, Hospitalfor Sick Children, Universityof Toronto Seema Mital Seema Mital Inform

  9. Stemcell Information: SKIP000671 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available s Teratoma assay Yes qRT-PCR ... Immune Disease Institute, Program in Cellular and Molecular Medicine, Children...Disease Institute, Program in Cellular and Molecular Medicine, Children's Hospital Boston Immune Disease Ins...titute, Program in Cellular and Molecular Medicine, Children's Hospital Boston ... 20888316--21368825 10.10...nd Molecular Medicine, Children's Hospital Boston Derrick J. Rossi Derrick J. Rossi Information Only Immune ...'s Hospital Boston Immune Disease Institute, Program in Cellular a

  10. Stemcell Information: SKIP000670 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available Teratoma assay Yes qRT-PCR ... Immune Disease Institute, Program in Cellular and Molecular Medicine, Children...sease Institute, Program in Cellular and Molecular Medicine, Children's Hospital Boston Immune Disease Insti...tute, Program in Cellular and Molecular Medicine, Children's Hospital Boston ... 20888316--21368825 10.1016...'s Hospital Boston Immune Disease Institute, Program in Cellular and Molecular Medicine, Chil...dren's Hospital Boston Derrick J. Rossi Derrick J. Rossi Information Only Immune Di

  11. Stemcell Information: SKIP000562 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available nnear Caroline Kinnear Department of Pediatrics|and dDevelopmental and|Stem Cell Biology, Hospital|for Sick Children..., University|of Toronto Department of Pediatricsand dDevelopmental andStem Cell Biology, Hospitalfor Sick Children...and|Stem Cell Biology, Hospital|for Sick Children, University|of Toronto Department of Pediatricsand dDevelo...pmental andStem Cell Biology, Hospitalfor Sick Children, Universityof Toronto Seema Mital Seema Mital Inform

  12. Stemcell Information: SKIP000646 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available ing and immunocytochemistry ... No ... Yes ... Tsuyoshi Fujioka 藤岡 剛 RIKEN BioResource Center 理化学研究所バイオリ...ソースセンター RIKEN BioResource Center 理化学研究所バイオリソースセンター Yukio Nakamura 中村 幸夫 Information Only RIKEN BioResource Center 理化学

  13. Stemcell Information: SKIP001130 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available o University School of Medicine 慶應義塾大学医学部生理学教室 Department of Physiology, Keio University School of Medicine 慶應義塾大学医学部生理学...教室 Hideyuki Okano 岡野栄之 Information Only Department of Physiology, Keio University School of Medicine 慶應義塾大学医学部生理学

  14. Stemcell Information: SKIP000849 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available Technologies). 健常人由来iPS細胞。 human ES-like Research Grade Sendai virus Oct4, Sox2,Klf4, and c-Myc ... Yes MEF Hu...Chris M. Woodard ... The New York Stem Cell Foundation Research Institute The New York Stem Cell Foundation Research... Institute Scott A. Noggle ... Scott A. Noggle ... The New York Stem Cell Foundation Research Institute The N...ew York Stem Cell Foundation Research Institute Information Only ... 25456120

  15. Stemcell Information: SKIP000524 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available nzhao Cheng Linzhao Cheng Stem Cell Program, Institute for Cell Engineering, and Department of Gynecology & ...Obstetrics, Johns Hopkins University School of Medicine Stem Cell Program, Institute for Cell Engineering, a...cine Stem Cell Program, Institute for Cell Engineering, and Department of Gynecology & Obstetrics, Johns Hop...kins University School of Medicine Stem Cell Program, Institute for Cell Engineering, and Department of Gyne...nzhao Cheng Information Only Stem Cell Program, Institute for Cell Engineering, and Department of Gynecology

  16. Stemcell Information: SKIP000543 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available ... Atsushi Tanaka 田中 敦史 Department of Cardiology, Keio University School of Medicine 慶應義塾大学医学部循環器内科 Depart...ment of Cardiology, Keio University School of Medicine 慶應義塾大学医学部循環器内科 Shinsuke Yuasa 湯浅 慎介 Information Only

  17. Stemcell Information: SKIP001129 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available o University School of Medicine 慶應義塾大学医学部生理学教室 Department of Physiology, Keio University School of Medicine 慶應義塾大学医学...部生理学教室 Hideyuki Okano 岡野栄之 Information Only Department of Physiology, Keio University School of Medicine 慶應義塾大学医学

  18. Stemcell Information: SKIP001131 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available o University School of Medicine 慶應義塾大学医学部生理学教室 Department of Physiology, Keio University School of Medicine 慶應義塾大学医学...部生理学教室 Hideyuki Okano 岡野栄之 Information Only Department of Physiology, Keio University School of Medicine 慶應義塾大学医学

  19. Stemcell Information: SKIP000526 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available nzhao Cheng Linzhao Cheng Stem Cell Program, Institute for Cell Engineering, and Department of Gynecology & ...cine Stem Cell Program, Institute for Cell Engineering, and Department of Gynecology & Obstetrics, Johns Hop...kins University School of Medicine Stem Cell Program, Institute for Cell Engineering, and Department of Gynecology...nzhao Cheng Information Only Stem Cell Program, Institute for Cell Engineering, and Department of Gynecology...Obstetrics, Johns Hopkins University School of Medicine Stem Cell Program, Institute for Cell Engineering, and Department of Gynecolo

  20. Stemcell Information: SKIP000523 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available nzhao Cheng Linzhao Cheng Stem Cell Program, Institute for Cell Engineering, and Department of Gynecology & ...cine Stem Cell Program, Institute for Cell Engineering, and Department of Gynecology & Obstetrics, Johns Hop...kins University School of Medicine Stem Cell Program, Institute for Cell Engineering, and Department of Gynecology...nzhao Cheng Information Only Stem Cell Program, Institute for Cell Engineering, and Department of Gynecology...Obstetrics, Johns Hopkins University School of Medicine Stem Cell Program, Institute for Cell Engineering, and Department of Gynecolo

  1. Stemcell Information: SKIP000525 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available nzhao Cheng Linzhao Cheng Stem Cell Program, Institute for Cell Engineering, and Department of Gynecology & ...cine Stem Cell Program, Institute for Cell Engineering, and Department of Gynecology & Obstetrics, Johns Hop...kins University School of Medicine Stem Cell Program, Institute for Cell Engineering, and Department of Gynecology...nzhao Cheng Information Only Stem Cell Program, Institute for Cell Engineering, and Department of Gynecology...Obstetrics, Johns Hopkins University School of Medicine Stem Cell Program, Institute for Cell Engineering, and Department of Gynecolo

  2. Stemcell Information: SKIP000522 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available ... Yes ... Linzhao Cheng Linzhao Cheng Stem Cell Program, Institute for Cell Engineering, and Department of Gynecology...Cell Engineering, and Department of Gynecology & Obstetrics, Johns Hopkins Univer...sity School of Medicine Stem Cell Program, Institute for Cell Engineering, and Department of Gynecology & Ob...stetrics, Johns Hopkins University School of Medicine Stem Cell Program, Institute for Cell Engineering, and Department of Gynecology...ne Linzhao Cheng Linzhao Cheng Information Only Stem Cell Program, Institute for Cell Engineering, and Department of Gynecology

  3. Stemcell Information: SKIP000661 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available lkaline phosphatase staining and immunocytochemistry ... No ... Yes ... Tsuyoshi Fujioka 藤岡 剛 RIKEN BioResource Center 理化学...研究所バイオリソースセンター RIKEN BioResource Center 理化学研究所バイオリソースセンター Yukio Nakamura 中村 幸夫 Information... Only RIKEN BioResource Center 理化学研究所バイオリソースセンター ... 20973836 10.1111/j.1749-077

  4. Stemcell Information: SKIP000643 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available kaline phosphatase staining and immunocytochemistry ... Yes ... Tsuyoshi Fujioka 藤岡 剛 RIKEN BioResource Center 理化学...研究所バイオリソースセンター RIKEN BioResource Center 理化学研究所バイオリソースセンター Yukio Nakamura 中村 幸夫 Information On...ly RIKEN BioResource Center 理化学研究所バイオリソースセンター ... 20973836 10.1111/j.1749-0774.2

  5. Stemcell Information: SKIP000641 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available Alkaline phosphatase staining and immunocytochemistry ... No ... Yes ... Tsuyoshi Fujioka 藤岡 剛 RIKEN BioResource Center 理化学...研究所バイオリソースセンター RIKEN BioResource Center 理化学研究所バイオリソースセンター Yukio Nakamura 中村 幸夫 Informati...on Only RIKEN BioResource Center 理化学研究所バイオリソースセンター ... 20973836 10.1111/j.1749-0

  6. Stemcell Information: SKIP000657 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available lkaline phosphatase staining and immunocytochemistry ... No ... Yes ... Tsuyoshi Fujioka 藤岡 剛 RIKEN BioResource Center 理化学...研究所バイオリソースセンター RIKEN BioResource Center 理化学研究所バイオリソースセンター Yukio Nakamura 中村 幸夫 Information... Only RIKEN BioResource Center 理化学研究所バイオリソースセンター ... 20973836 10.1111/j.1749-077

  7. Stemcell Information: SKIP000658 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available lkaline phosphatase staining and immunocytochemistry ... No ... Yes ... Tsuyoshi Fujioka 藤岡 剛 RIKEN BioResource Center 理化学...研究所バイオリソースセンター RIKEN BioResource Center 理化学研究所バイオリソースセンター Yukio Nakamura 中村 幸夫 Information... Only RIKEN BioResource Center 理化学研究所バイオリソースセンター ... 20973836 10.1111/j.1749-077

  8. Stemcell Information: SKIP000659 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available lkaline phosphatase staining and immunocytochemistry ... No ... Yes ... Tsuyoshi Fujioka 藤岡 剛 RIKEN BioResource Center 理化学...研究所バイオリソースセンター RIKEN BioResource Center 理化学研究所バイオリソースセンター Yukio Nakamura 中村 幸夫 Information... Only RIKEN BioResource Center 理化学研究所バイオリソースセンター ... 20973836 10.1111/j.1749-077

  9. Stemcell Information: SKIP000642 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available kaline phosphatase staining and immunocytochemistry ... Yes ... Tsuyoshi Fujioka 藤岡 剛 RIKEN BioResource Center 理化学...研究所バイオリソースセンター RIKEN BioResource Center 理化学研究所バイオリソースセンター Yukio Nakamura 中村 幸夫 Information On...ly RIKEN BioResource Center 理化学研究所バイオリソースセンター ... 20973836 10.1111/j.1749-0774.2

  10. Stemcell Information: SKIP000660 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available lkaline phosphatase staining and immunocytochemistry ... No ... Yes ... Tsuyoshi Fujioka 藤岡 剛 RIKEN BioResource Center 理化学...研究所バイオリソースセンター RIKEN BioResource Center 理化学研究所バイオリソースセンター Yukio Nakamura 中村 幸夫 Information... Only RIKEN BioResource Center 理化学研究所バイオリソースセンター ... 20973836 10.1111/j.1749-077

  11. Stemcell Information: SKIP000654 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available ujioka 藤岡 剛 RIKEN BioResource Center 理化学研究所バイオリソースセンター RIKEN BioResource Center 理化学研究所バイオリソースセンター Yukio Naka...mura 中村 幸夫 Information Only RIKEN BioResource Center 理化学研究所バイオリソースセンター ... 20973

  12. Stemcell Information: SKIP000650 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available lkaline phosphatase staining and immunocytochemistry ... No ... Yes ... Tsuyoshi Fujioka 藤岡 剛 RIKEN BioResource Center 理化学...研究所バイオリソースセンター RIKEN BioResource Center 理化学研究所バイオリソースセンター Yukio Nakamura 中村 幸夫 Information... Only RIKEN BioResource Center 理化学研究所バイオリソースセンター ... 20973836 10.1111/j.1749-077

  13. Stemcell Information: SKIP000656 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available lkaline phosphatase staining and immunocytochemistry ... No ... Yes ... Tsuyoshi Fujioka 藤岡 剛 RIKEN BioResource Center 理化学...研究所バイオリソースセンター RIKEN BioResource Center 理化学研究所バイオリソースセンター Yukio Nakamura 中村 幸夫 Information... Only RIKEN BioResource Center 理化学研究所バイオリソースセンター ... 20973836 10.1111/j.1749-077

  14. Stemcell Information: SKIP000645 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available kaline phosphatase staining and immunocytochemistry ... Yes ... Tsuyoshi Fujioka 藤岡 剛 RIKEN BioResource Center 理化学...研究所バイオリソースセンター RIKEN BioResource Center 理化学研究所バイオリソースセンター Yukio Nakamura 中村 幸夫 Information On...ly RIKEN BioResource Center 理化学研究所バイオリソースセンター ... 20973836 10.1111/j.1749-0774.2

  15. Stemcell Information: SKIP000649 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available Fujioka 藤岡 剛 RIKEN BioResource Center 理化学研究所バイオリソースセンター RIKEN BioResource Center 理化学研究所バイオリソースセンター Yukio Na...kamura 中村 幸夫 Information Only RIKEN BioResource Center 理化学研究所バイオリソースセンター ... 209

  16. Stemcell Information: SKIP000651 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available ujioka 藤岡 剛 RIKEN BioResource Center 理化学研究所バイオリソースセンター RIKEN BioResource Center 理化学研究所バイオリソースセンター Yukio Naka...mura 中村 幸夫 Information Only RIKEN BioResource Center 理化学研究所バイオリソースセンター ... 20973

  17. Stemcell Information: SKIP000647 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available staining and immunocytochemistry ... Yes Teratoma formation ... Yes ... Yes ... Tsuyoshi Fujioka 藤岡 剛 RIKEN BioResource Center 理化学...研究所バイオリソースセンター RIKEN BioResource Center 理化学研究所バイオリソースセンター Yukio Nakamura 中村 幸夫 Informat...ion Only RIKEN BioResource Center 理化学研究所バイオリソースセンター ... 20973836 10.1111/j.1749-

  18. Stemcell Information: SKIP000638 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available Alkaline phosphatase staining and immunocytochemistry ... No ... Yes ... Tsuyoshi Fujioka 藤岡 剛 RIKEN BioResource Center 理化学...研究所バイオリソースセンター RIKEN BioResource Center 理化学研究所バイオリソースセンター Yukio Nakamura 中村 幸夫 Informati...on Only RIKEN BioResource Center 理化学研究所バイオリソースセンター ... 20973836 10.1111/j.1749-0

  19. Stemcell Information: SKIP000885 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available chemistry Yes Teratomas forming assay ... Yes G-band analyses ... Kyoko Miura 三浦恭子 Biomedical Animal Res...学研究室 ... Information Only Biomedical Animal Research Laboratory, Institute for Genetic ...earch Laboratory, Institute for Genetic Medicine, Hokkaido University, Hokkaido 北海道大学 遺伝子病制御研究所 動物機能医科...Medicine, Hokkaido University, Hokkaido 北海道大学 遺伝子病制御研究所 動物機能医科学研究室 http://www.igm.hokudai.ac.jp/debanezumi/

  20. Stemcell Information: SKIP000883 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available Hokkaido University, Hokkaido 北海道大学 遺伝子病制御研究所 動物機能医科学研究室 ... Information Only Biomedical Animal Research Lab...say ... No ... Kyoko Miura 三浦恭子 Biomedical Animal Research Laboratory, Institute for Genetic Medicine, ...oratory, Institute for Genetic Medicine, Hokkaido University, Hokkaido 北海道大学 遺伝子病制御研究所 動物機能医科

  1. Stemcell Information: SKIP000882 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available Hokkaido University, Hokkaido 北海道大学 遺伝子病制御研究所 動物機能医科学研究室 ... Information Only Biomedical Animal Research Lab...say ... No ... Kyoko Miura 三浦恭子 Biomedical Animal Research Laboratory, Institute for Genetic Medicine, ...oratory, Institute for Genetic Medicine, Hokkaido University, Hokkaido 北海道大学 遺伝子病制御研究所 動物機能医科

  2. Stemcell Information: SKIP000878 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available kkaido University, Hokkaido 北海道大学 遺伝子病制御研究所 動物機能医科学研究室 ... Information Only Biomedical Animal Research Labor...y ... No ... Kyoko Miura 三浦恭子 Biomedical Animal Research Laboratory, Institute for Genetic Medicine, Ho...atory, Institute for Genetic Medicine, Hokkaido University, Hokkaido 北海道大学 遺伝子病制御研究所 動物機能医科

  3. Stemcell Information: SKIP000886 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available Hokkaido University, Hokkaido 北海道大学 遺伝子病制御研究所 動物機能医科学研究室 ... Information Only Biomedical Animal Research Lab...say ... No ... Kyoko Miura 三浦恭子 Biomedical Animal Research Laboratory, Institute for Genetic Medicine, ...oratory, Institute for Genetic Medicine, Hokkaido University, Hokkaido 北海道大学 遺伝子病制御研究所 動物機能医科

  4. Stemcell Information: SKIP000880 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available Hokkaido University, Hokkaido 北海道大学 遺伝子病制御研究所 動物機能医科学研究室 ... Information Only Biomedical Animal Research Lab...say ... No ... Kyoko Miura 三浦恭子 Biomedical Animal Research Laboratory, Institute for Genetic Medicine, ...oratory, Institute for Genetic Medicine, Hokkaido University, Hokkaido 北海道大学 遺伝子病制御研究所 動物機能医科

  5. Stemcell Information: SKIP000879 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available kkaido University, Hokkaido 北海道大学 遺伝子病制御研究所 動物機能医科学研究室 ... Information Only Biomedical Animal Research Labor...y ... No ... Kyoko Miura 三浦恭子 Biomedical Animal Research Laboratory, Institute for Genetic Medicine, Ho...atory, Institute for Genetic Medicine, Hokkaido University, Hokkaido 北海道大学 遺伝子病制御研究所 動物機能医科

  6. Stemcell Information: SKIP000881 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available Hokkaido University, Hokkaido 北海道大学 遺伝子病制御研究所 動物機能医科学研究室 ... Information Only Biomedical Animal Research Lab...say ... No ... Kyoko Miura 三浦恭子 Biomedical Animal Research Laboratory, Institute for Genetic Medicine, ...oratory, Institute for Genetic Medicine, Hokkaido University, Hokkaido 北海道大学 遺伝子病制御研究所 動物機能医科

  7. Stemcell Information: SKIP000884 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available Hokkaido University, Hokkaido 北海道大学 遺伝子病制御研究所 動物機能医科学研究室 ... Information Only Biomedical Animal Research Lab...say ... No ... Kyoko Miura 三浦恭子 Biomedical Animal Research Laboratory, Institute for Genetic Medicine, ...oratory, Institute for Genetic Medicine, Hokkaido University, Hokkaido 北海道大学 遺伝子病制御研究所 動物機能医科

  8. Stemcell Information: SKIP000826 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available ray Hideyuki Okano 岡野栄之 Keio University, School of Medicine, Department of Physiology ... 慶應義塾大学 医学部 生理学教室 Keio... University, School of Medicine, Department of Physiology ... 慶應義塾大学 医学部 生理学教室 Hideyuki Okano 岡野栄之 Information ...Only Keio University, School of Medicine, Department of Physiology ... 慶應義塾大学 医学部 生理学

  9. Stemcell Information: SKIP000519 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available ... Yohei Okada 岡田 洋平 Department of Physiology, Keio University School of Medicine 慶應義塾大学 医学部 生理学...教室 Department of Physiology, Keio University School of Medicine 慶應義塾大学 医学部 生理学教室 Hideyuki O...kano 岡野 栄之 Information Only Department of Physiology, Keio University School of Medicine 慶應義塾大学 医学部 生理学教室 ...

  10. Stemcell Information: SKIP000832 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available University, School of Medicine, Department of Physiology ... 慶應義塾大学 医学部 生理学教室 Keio U...niversity, School of Medicine, Department of Physiology ... 慶應義塾大学 医学部 生理学教室 Hideyuki Okano 岡野栄之 Information On...ly Keio University, School of Medicine, Department of Physiology ... 慶應義塾大学 医学部 生理学教室 ... 26905201 10.1016/j.s

  11. Stemcell Information: SKIP000343 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available blasts (HDFs)|same patient as eFOP3-2 FOP疾患者由来iSP細胞。|エピソーマル・プラスミドを用いて作製。 -- Research Grade Plasmid Y4 ... Yes SNL feeder cell...s primate ES cell medium(ReproCELL) ... Yes Immunohistochemistry Ye...yoto University 京都大学 再生医科学研究所 ... Information Only ... 24321451 10.1186/1750-1172-8-190 Induced pluripotent stem cell

  12. Stemcell Information: SKIP000818 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available Asian/Caucasian -- No Control iPSC derived from HDFs (KURABO (01491)). KURABO(01491)由来iPS細胞。 human ES-like R... ... Noriyuki Tsumaki 妻木 範行 Center for iPS Cell Research and Application, Kyoto University 京都大学iPS細胞研究所 ... I...nformation Only Center for iPS Cell Research and Application, Kyoto University 京都大学iPS細胞研究所 https://www.cira

  13. Stemcell Information: SKIP001095 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available line derived from a neonate.(1439 KURABO)| 新生児皮膚繊維芽細胞(1439 KURABO)由来iPS細胞 human ES-like Research ...on, Kyoto University 京都大学iPS細胞研究所 ... Information Only Center for iPS Cell Research and Application,Kyoto University 京都大学iPS細胞... SKIP001095 ... Normal WT-1-#1 WT-1-#1 ... 0-9 Male ... -- No Nomal human iPS cell...ling type II collagenopathy skeletal dysplasia by directed conversion and induced pluripotent stem cell

  14. Stemcell Information: SKIP000812 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available 714)-specific iPSC タナトフォリック骨異形成症(GM00714)患者線維芽細胞由来iPS細胞 human ES-like Research Grade Other Mixture Y4: OCT4,... iPS Cell Research and Application, Kyoto University 京都大学iPS細胞研究所 ... Information Only Center for iPS Cell R...esearch and Application, Kyoto University 京都大学iPS細胞研究所 https://www.cira.kyoto-u.a

  15. Experiment information - GRIPDB | LSDB Archive [Life Science Database Archive metadata

    Lifescience Database Archive (English)

    Full Text Available switchLanguage; BLAST Search Image Search Home About Archive Update History Data List Contact us GRI...a.nbdc01665-002 Description of data contents Experimentally identified GPCR interaction regions Data file File name: gri...pdb_exp_info.zip File URL: ftp://ftp.biosciencedbc.jp/archive/gripdb/LATEST/gripdb_exp_info.zip ...File size: 6.2 KB Simple search URL http://togodb.biosciencedbc.jp/togodb/view/gri...es Data item Description ID Experiment information ID GRIP ID1 GRIP ID related wigh the experiment GRIP ID2 No. in GRI

  16. Prediction information - GRIPDB | LSDB Archive [Life Science Database Archive metadata

    Lifescience Database Archive (English)

    Full Text Available switchLanguage; BLAST Search Image Search Home About Archive Update History Data List Contact us GRI...a.nbdc01665-004 Description of data contents Predicted GPCR interaction regions Data file File name: gripdb_...predicted_info.zip File URL: ftp://ftp.biosciencedbc.jp/archive/gripdb/LATEST/gripdb_predicted_info.zip File... size: 219 KB Simple search URL http://togodb.biosciencedbc.jp/togodb/view/gripdb...entries Data item Description ID Prediction information ID GRIP ID GRIP ID related wigh the prediction Predi

  17. Stemcell Information: SKIP000984 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available istochemistry ... Yes Differentiation Yes RT-PCR No ... Yes ... Yes RT-PCR ... Tony Hunter Tony Hunter Molecular and Cell Biology... Laboratory, Salk Institute for Biological Studies, La Jolla, United States Molecular and Cell Biology...tes Molecular and Cell Biology Laboratory, Salk Institute for Biological Studies, La Jolla, United States Molecular and Cell Biology...ter Tony Hunter Information Only Molecular and Cell Biology Laboratory, Salk Inst...itute for Biological Studies, La Jolla, United States Molecular and Cell Biology Laboratory, Salk Institute

  18. Stemcell Information: SKIP001097 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available line derived from a neonate.(1439 KURABO)| 新生児皮膚繊維芽細胞(1439 KURABO)由来iPS細胞 human ES-like Research ...n, Kyoto University 京都大学iPS細胞研究所 ... Information Only Center for iPS Cell Research and Application,Kyoto University 京都大学iPS細胞... SKIP001097 ... Normal WT-1-#3 WT-1-#3 ... 0-9 Male ... -- No Nomal human iPS cell...ing type II collagenopathy skeletal dysplasia by directed conversion and induced pluripotent stem cell

  19. Stemcell Information: SKIP000537 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available ).(Control line with a wildtype ACVR1 gene.) ヒト線維芽細胞(Cell Application,Inc. 106-05a Lot No.1388)由来iPS細胞。(コントロ...ール(ACVR1(WT))として使用)| human ES-like Research Grade Retrovirus OCT4, SOX2, KLF4, c-MYC ... Yes SNL feeder cell...s primate ES cell medium(ReproCELL) ... Yes Immunohistochemistry Yes EB formation as...生医科学研究所 ... Information Only ... 24321451 10.1186/1750-1172-8-190 Induced pluripotent stem cell

  20. Stemcell Information: SKIP000541 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available ved from human foreskin fibroblasts ((ATCC CRL-2522)(Control line with a wildtype ACVR1 gene.) 新生児包皮線維芽細胞(ATCC CRL-2522)由来iPS細胞...。(コントロール(ACVR1(WT))として使用)| -- Research Grade Plasmid Y4 ... Yes SNL feeder cells primate ES cell...究所 ... Information Only ... 24321451 10.1186/1750-1172-8-190 Induced pluripotent stem cells from patients

  1. Stemcell Information: SKIP000819 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available n/Caucasian -- No Control iPSC derived from HDFs (KURABO (01439)). KURABO(01439)由来iPS細胞。 human ES-like Resea...Noriyuki Tsumaki 妻木 範行 Center for iPS Cell Research and Application, Kyoto University 京都大学iPS細胞研究所 ... Infor...mation Only Center for iPS Cell Research and Application, Kyoto University 京都大学iPS細胞研究所 https://www.cira.kyo

  2. Stemcell Information: SKIP000866 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available Jerome Mertens--Fred H. Gage Jiangsu Collaborative Innovation Center for Language Ability, Jiangsu Normal U...niversity--The Salk Institute for Biological Studies, Laboratory of Genetics Jiangsu Collaborative Innovatio...Biological Studies, Laboratory of Genetics Jiangsu Collaborative Innovation Center for Language Ability, Jia...ngsu Normal University--The Salk Institute for Biological Studies, Laboratory of Genetics Jiangsu Collaborat...nstitute for Biological Studies, Laboratory of Genetics Jun Yao--Fred H. Gage Jun Yao--Fred H. Gage Information Only Jiangsu Collabor

  3. Stemcell Information: SKIP000868 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available Jerome Mertens--Fred H. Gage Jiangsu Collaborative Innovation Center for Language Ability, Jiangsu Normal U...niversity--The Salk Institute for Biological Studies, Laboratory of Genetics Jiangsu Collaborative Innovatio...Biological Studies, Laboratory of Genetics Jiangsu Collaborative Innovation Center for Language Ability, Jia...ngsu Normal University--The Salk Institute for Biological Studies, Laboratory of Genetics Jiangsu Collaborat...nstitute for Biological Studies, Laboratory of Genetics Jun Yao--Fred H. Gage Jun Yao--Fred H. Gage Information Only Jiangsu Collabor

  4. Stemcell Information: SKIP000869 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available Jerome Mertens--Fred H. Gage Jiangsu Collaborative Innovation Center for Language Ability, Jiangsu Normal U...niversity--The Salk Institute for Biological Studies, Laboratory of Genetics Jiangsu Collaborative Innovatio...Biological Studies, Laboratory of Genetics Jiangsu Collaborative Innovation Center for Language Ability, Jia...ngsu Normal University--The Salk Institute for Biological Studies, Laboratory of Genetics Jiangsu Collaborat...nstitute for Biological Studies, Laboratory of Genetics Jun Yao--Fred H. Gage Jun Yao--Fred H. Gage Information Only Jiangsu Collabor

  5. Stemcell Information: SKIP000867 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available Jerome Mertens--Fred H. Gage Jiangsu Collaborative Innovation Center for Language Ability, Jiangsu Normal U...niversity--The Salk Institute for Biological Studies, Laboratory of Genetics Jiangsu Collaborative Innovatio...Biological Studies, Laboratory of Genetics Jiangsu Collaborative Innovation Center for Language Ability, Jia...ngsu Normal University--The Salk Institute for Biological Studies, Laboratory of Genetics Jiangsu Collaborat...nstitute for Biological Studies, Laboratory of Genetics Jun Yao--Fred H. Gage Jun Yao--Fred H. Gage Information Only Jiangsu Collabor

  6. Stemcell Information: SKIP000813 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available GM10749)-specific iPSC タナトフォリック骨異形成症(GM10749)患者線維芽細胞由来iPS細胞 human ES-like Research Grade Other Mixture Y4: O... for iPS Cell Research and Application, Kyoto University 京都大学iPS細胞研究所 ... Information Only Center for iPS Ce...ll Research and Application, Kyoto University 京都大学iPS細胞研究所 https://www.cira.kyoto

  7. Stemcell Information: SKIP001096 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available line derived from a neonate.(1439 KURABO)| 新生児皮膚繊維芽細胞(1439 KURABO)由来iPS細胞 human ES-like Research ...n, Kyoto University 京都大学iPS細胞研究所 ... Information Only Center for iPS Cell Research and Application,Kyoto University 京都大学iPS細胞... SKIP001096 ... Normal WT-1-#2 WT-1-#2 ... 0-9 Male ... -- No Nomal human iPS cell...ing type II collagenopathy skeletal dysplasia by directed conversion and induced pluripotent stem cell

  8. Stemcell Information: SKIP000834 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available ... No ... Yes Microarray Hideyuki Okano 岡野栄之 Keio University, School of Medicine, Department of Physiology ... 慶應義塾大学 医学...部 生理学教室 Keio University, School of Medicine, Department of Physiology ... 慶應義塾大学 医学...部 生理学教室 Hideyuki Okano 岡野栄之 Information Only Keio University, School of Medicine, Department of Physiology ... 慶應義塾大学 医学

  9. Stemcell Information: SKIP000831 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available niversity, School of Medicine, Department of Physiology ... 慶應義塾大学 医学部 生理学教室 Keio Un...iversity, School of Medicine, Department of Physiology ... 慶應義塾大学 医学部 生理学教室 Hideyuki Okano 岡野栄之 Information Onl...y Keio University, School of Medicine, Department of Physiology ... 慶應義塾大学 医学部 生理学教室 ... 26905201 10.1016/j.st

  10. Stemcell Information: SKIP000830 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available Hideyuki Okano 岡野栄之 Keio University, School of Medicine, Department of Physiology ... 慶應義塾大学 医学部 生理学教室 Keio Un...iversity, School of Medicine, Department of Physiology ... 慶應義塾大学 医学部 生理学教室 Hideyuki Okano 岡野栄之 Information Onl...y Keio University, School of Medicine, Department of Physiology ... 慶應義塾大学 医学部 生理学教室

  11. Stemcell Information: SKIP000515 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available ... Yohei Okada 岡田 洋平 Department of Physiology, Keio University School of Medicine 慶應義塾大学 医学...部 生理学教室 Department of Physiology, Keio University School of Medicine 慶應義塾大学 医学部 生理学教室 Hideyuki Okan...o 岡野 栄之 Information Only Department of Physiology, Keio University School of Medicine 慶應義塾大学 医学部 生理学教室 ...

  12. Stemcell Information: SKIP000829 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available ... Yes Microarray Hideyuki Okano 岡野栄之 Keio University, School of Medicine, Department of Physiology ... 慶應義塾大学 医学...部 生理学教室 Keio University, School of Medicine, Department of Physiology ... 慶應義塾大学 医学部 生理学教室 Hideyuki Okano 岡野...栄之 Information Only Keio University, School of Medicine, Department of Physiology ... 慶應義塾大学 医学

  13. Stemcell Information: SKIP000825 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available ray Hideyuki Okano 岡野栄之 Keio University, School of Medicine, Department of Physiology ... 慶應義塾大学 医学部 生理学教室 Keio... University, School of Medicine, Department of Physiology ... 慶應義塾大学 医学部 生理学教室 Hideyuki Okano 岡野栄之 Information ...Only Keio University, School of Medicine, Department of Physiology ... 慶應義塾大学 医学部 生理

  14. Stemcell Information: SKIP000516 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available ... Yohei Okada 岡田 洋平 Department of Physiology, Keio University School of Medicine 慶應義塾大学 医学...部 生理学教室 Department of Physiology, Keio University School of Medicine 慶應義塾大学 医学部 生理学教室 Hideyuki Oka...no 岡野 栄之 Information Only Department of Physiology, Keio University School of Medicine 慶應義塾大学 医学部 生理学教室 ...

  15. Stemcell Information: SKIP000842 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available  栄之 Department of Physiology, Keio University School of Medicine 慶應義塾大学 医学部 生理学教室 Department of Physiology, ...Keio University School of Medicine 慶應義塾大学 医学部 生理学教室 Hideyuki Okano 岡野 栄之 Information Only Department of Phys...iology, Keio University School of Medicine 慶應義塾大学 医学部 生理学教室 ... 26905201 10.1016/j.stemcr.2016.01.010 Funct

  16. Stemcell Information: SKIP000833 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available ... No ... Yes Microarray Hideyuki Okano 岡野栄之 Keio University, School of Medicine, Department of Physiology ... 慶應義塾大学 医学...部 生理学教室 Keio University, School of Medicine, Department of Physiology ... 慶應義塾大学 医学...部 生理学教室 Hideyuki Okano 岡野栄之 Information Only Keio University, School of Medicine, Department of Physiology ... 慶應義塾大学 医学

  17. Stemcell Information: SKIP000520 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available ... Yohei Okada 岡田 洋平 Department of Physiology, Keio University School of Medicine 慶應義塾大学 医学...部 生理学教室 Department of Physiology, Keio University School of Medicine 慶應義塾大学 医学部 生理学教室 Hideyuki O...kano 岡野 栄之 Information Only Department of Physiology, Keio University School of Medicine 慶應義塾大学 医学部 生理学教室 ...

  18. Stemcell Information: SKIP000517 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available ... Yohei Okada 岡田 洋平 Department of Physiology, Keio University School of Medicine 慶應義塾大学 医学...部 生理学教室 Department of Physiology, Keio University School of Medicine 慶應義塾大学 医学部 生理学教室 Hideyuki Okan...o 岡野 栄之 Information Only Department of Physiology, Keio University School of Medicine 慶應義塾大学 医学部 生理学教室 ...

  19. Design of Integrated Database on Mobile Information System: A Study of Yogyakarta Smart City App

    Science.gov (United States)

    Nurnawati, E. K.; Ermawati, E.

    2018-02-01

    An integration database is a database which acts as the data store for multiple applications and thus integrates data across these applications (in contrast to an Application Database). An integration database needs a schema that takes all its client applications into account. The benefit of the schema that sharing data among applications does not require an extra layer of integration services on the applications. Any changes to data made in a single application are made available to all applications at the time of database commit - thus keeping the applications’ data use better synchronized. This study aims to design and build an integrated database that can be used by various applications in a mobile device based system platforms with the based on smart city system. The built-in database can be used by various applications, whether used together or separately. The design and development of the database are emphasized on the flexibility, security, and completeness of attributes that can be used together by various applications to be built. The method used in this study is to choice of the appropriate database logical structure (patterns of data) and to build the relational-database models (Design Databases). Test the resulting design with some prototype apps and analyze system performance with test data. The integrated database can be utilized both of the admin and the user in an integral and comprehensive platform. This system can help admin, manager, and operator in managing the application easily and efficiently. This Android-based app is built based on a dynamic clientserver where data is extracted from an external database MySQL. So if there is a change of data in the database, then the data on Android applications will also change. This Android app assists users in searching of Yogyakarta (as smart city) related information, especially in culture, government, hotels, and transportation.

  20. Design and Establishment of Quality Model of Fundamental Geographic Information Database

    Science.gov (United States)

    Ma, W.; Zhang, J.; Zhao, Y.; Zhang, P.; Dang, Y.; Zhao, T.

    2018-04-01

    In order to make the quality evaluation for the Fundamental Geographic Information Databases(FGIDB) more comprehensive, objective and accurate, this paper studies and establishes a quality model of FGIDB, which formed by the standardization of database construction and quality control, the conformity of data set quality and the functionality of database management system, and also designs the overall principles, contents and methods of the quality evaluation for FGIDB, providing the basis and reference for carry out quality control and quality evaluation for FGIDB. This paper designs the quality elements, evaluation items and properties of the Fundamental Geographic Information Database gradually based on the quality model framework. Connected organically, these quality elements and evaluation items constitute the quality model of the Fundamental Geographic Information Database. This model is the foundation for the quality demand stipulation and quality evaluation of the Fundamental Geographic Information Database, and is of great significance on the quality assurance in the design and development stage, the demand formulation in the testing evaluation stage, and the standard system construction for quality evaluation technology of the Fundamental Geographic Information Database.

  1. Database search for safety information on cosmetic ingredients.

    Science.gov (United States)

    Pauwels, Marleen; Rogiers, Vera

    2007-12-01

    Ethical considerations with respect to experimental animal use and regulatory testing are worldwide under heavy discussion and are, in certain cases, taken up in legislative measures. The most explicit example is the European cosmetic legislation, establishing a testing ban on finished cosmetic products since 11 September 2004 and enforcing that the safety of a cosmetic product is assessed by taking into consideration "the general toxicological profile of the ingredients, their chemical structure and their level of exposure" (OJ L151, 32-37, 23 June 1993; OJ L066, 26-35, 11 March 2003). Therefore the availability of referenced and reliable information on cosmetic ingredients becomes a dire necessity. Given the high-speed progress of the World Wide Web services and the concurrent drastic increase in free access to information, identification of relevant data sources and evaluation of the scientific value and quality of the retrieved data, are crucial. Based upon own practical experience, a survey is put together of freely and commercially available data sources with their individual description, field of application, benefits and drawbacks. It should be mentioned that the search strategies described are equally useful as a starting point for any quest for safety data on chemicals or chemical-related substances in general.

  2. Stemcell Information: SKIP001165 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available plication (CiRA), Kyoto University 京都大学iPS細胞研究所 Yamanaka Shinya 山中 伸弥 Information Only ... 18035408 10.1016/j.cell... line derived from a healthy individual dermal fibroblasts. 健常人の皮膚線維芽細胞由来のヒトiPS細胞株。 human ES-like Rese... iPS Cell Research and Application (CiRA), Kyoto University 京都大学iPS細胞研究所 Center for iPS Cell Research and Ap... SKIP001165 ... Normal 246B2 246B2 ... 36 30-39 Female ... -- No Human iPS cell....2007.11.019 Induction of pluripotent stem cells from adult human fibrob

  3. Stemcell Information: SKIP001168 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available plication (CiRA), Kyoto University 京都大学iPS細胞研究所 Yamanaka Shinya 山中 伸弥 Information Only ... 18035408 10.1016/j.cell... line derived from a healthy individual dermal fibroblasts. 健常人の皮膚線維芽細胞由来のヒトiPS細胞株。 human ES-like Rese... iPS Cell Research and Application (CiRA), Kyoto University 京都大学iPS細胞研究所 Center for iPS Cell Research and Ap... SKIP001168 ... Normal 246B6 246B6 ... 36 30-39 Female ... -- No Human iPS cell....2007.11.019 Induction of pluripotent stem cells from adult human fibrob

  4. Stemcell Information: SKIP001104 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available 0-9 Female ... -- No hiPSC Generation from Peripheral Blood (CD34+) by using non-T medium. 末梢血CD34陽性細胞由来iPS細胞。|T細胞... ... Keisuke Okita 沖田 圭介 Center for iPS Cell Research and Application, Kyoto University 京都大学iPS細胞研究所 ... Info...rmation Only Center for iPS Cell Research and Application, Kyoto University 京都大学iPS細胞...nerate integration-free human-induced pluripotent stem cells from cord blood and peripheral blood cells.--Ce

  5. Stemcell Information: SKIP001159 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available ... 0-9 Male ... -- No Human iPS cell lines derived from BJ human foreskin fibroblasts. 新生児包皮から得た線維芽細胞由来のヒトiPS細胞... SKIP001159 ... BJ Human Foreskin Fibroblasts 新生児包皮由来の線維芽細胞 Unknown 246G6 246G6 ... ... Shinya 山中 伸弥 Center for iPS Cell Research and Application (CiRA), Kyoto University 京都大学iPS細胞研究所 Center for ...iPS Cell Research and Application (CiRA), Kyoto University 京都大学iPS細胞研究所 Yamanaka Shinya 山中 伸弥 Information On...ly ... 18035408--22146343 10.1016/j.cell.2007.11.019--10.1038/mt.2011.266 Indu

  6. Stemcell Information: SKIP001156 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available ... 0-9 Male ... -- No Human iPS cell lines derived from BJ human foreskin fibroblasts. 新生児包皮から得た線維芽細胞由来のヒトiPS細胞... SKIP001156 ... BJ Human Foreskin Fibroblasts 新生児包皮由来の線維芽細胞 Unknown 246G3 246G3 ... ...amanaka Shinya 山中 伸弥 Center for iPS Cell Research and Application (CiRA), Kyoto University 京都大学iPS細胞研究所 Cent...er for iPS Cell Research and Application (CiRA), Kyoto University 京都大学iPS細胞研究所 Yamanaka Shinya 山中 伸弥 Informa...tion Only ... 18035408--22146343 10.1016/j.cell.2007.11.019--10.1038/mt.2011.2

  7. Stemcell Information: SKIP000861 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available anese -- No hiPSC Generation from Peripheral Blood by using non-T medium. 末梢血由来iPS細胞。|T細胞の増殖には関与しない培地で作製。 hu...search and Application, Kyoto University 京都大学iPS細胞研究所 ... Information Only Center for iPS Cell Research and ...Application, Kyoto University 京都大学iPS細胞研究所 ... 23193063--26198166 10.1002/stem.1...293--10.5966/sctm.2014-0219 An efficient nonviral method to generate integration-free human-induced pluripotent stem cell...s from cord blood and peripheral blood cells.--Cell Therapy Using Human Induced Pluripotent Ste

  8. Stemcell Information: SKIP000797 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available pe II (ACG2) ... 200610 ... Fetus Female ... Yes No ACG II(GM07892)-specific iPS cells 軟骨無発症患者線維芽細胞(GM07892)由来iPS細胞...PS Cell Research and Application, Kyoto University 京都大学iPS細胞研究所 ... Information Only Center for iPS Cell Res...earch and Application,Kyoto University 京都大学iPS細胞研究所 CiRA https://www.cira.kyoto-u.ac.jp/e/index.html ... 251...irected conversion and induced pluripotent stem cells. Okada M, Ikegawa S, Morioka M, Yamashita A, Saito A,

  9. Stemcell Information: SKIP001176 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available plication (CiRA), Kyoto University 京都大学iPS細胞研究所 Yamanaka Shinya 山中 伸弥 Information Only ... 18035408 10.1016/j.cell... line derived from a healthy individual dermal fibroblasts. 健常人の皮膚線維芽細胞由来のヒトiPS細胞株。 human ES-like Rese... iPS Cell Research and Application (CiRA), Kyoto University 京都大学iPS細胞研究所 Center for iPS Cell Research and Ap... SKIP001176 ... Normal 253F5 253F5 ... 36 30-39 Female ... -- No Human iPS cell....2007.11.019 Induction of pluripotent stem cells from adult human fibrob

  10. Stemcell Information: SKIP000801 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available type II (ACG2) ... 200610 ... 0-9 Male ... Yes No ACG II(S2011-46)-specific iPS cells. Ⅱ型コラーゲン異常症患者線維芽細胞(S2011-46)由来iPS細胞... for iPS Cell Research and Application, Kyoto University 京都大学iPS細胞研究所 ... Information Only Center for iPS Ce...ll Research and Application,Kyoto University 京都大学iPS細胞研究所 CiRA https://www.cira.kyoto-u.ac.jp/e/index.html ... ...a by directed conversion and induced pluripotent stem cells. Okada M, Ikegawa S, Morioka M, Yamashita A, Sai

  11. Stemcell Information: SKIP000823 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available line, derived from fibloblast(JCRB TIG114). TIG114線維芽細胞由来iPS細胞。エピゾーマルベクターによる樹立、導入細胞には...suke Okita 沖田 圭介 Center for iPS Cell Research and Application, Kyoto University 京都大学iPS細胞研究所 Center for iPS ...Cell Research and Application, Kyoto University 京都大学iPS細胞研究所 Shinya Yamanaka 山中伸弥... Information Only Center for iPS Cell Research and Application, Kyoto University 京都大学iPS細胞研究所 http://www.cir... SKIP000823 ... Normal 418C-1 418C-1 ... 36 30-39 Male Japanese Japanese -- No Human iPS cell

  12. Stemcell Information: SKIP001099 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available line derived from a neonate.(789013 KURABO)| 新生児皮膚繊維芽細胞(789013 KURABO)由来iPS細胞 human ES-like Res...ication, Kyoto University 京都大学iPS細胞研究所 ... Information Only Center for iPS Cell Research and Application,Kyoto University 京都大学iPS細胞... SKIP001099 ... Normal WT-2-#32 WT-2-#32 ... 0-9 Male ... -- No Nomal human iPS cell... Modeling type II collagenopathy skeletal dysplasia by directed conversion and in...duced pluripotent stem cells. Okada M, Ikegawa S, Morioka M, Yamashita A, Saito A, Sawai H, Murotsuki J, Oha

  13. Stemcell Information: SKIP001169 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available plication (CiRA), Kyoto University 京都大学iPS細胞研究所 Yamanaka Shinya 山中 伸弥 Information Only ... 18035408 10.1016/j.cell... line derived from a healthy individual dermal fibroblasts. 健常人の皮膚線維芽細胞由来のヒトiPS細胞株。 human ES-like Rese... iPS Cell Research and Application (CiRA), Kyoto University 京都大学iPS細胞研究所 Center for iPS Cell Research and Ap... SKIP001169 ... Normal 246B4 246B4 ... 36 30-39 Female ... -- No Human iPS cell....2007.11.019 Induction of pluripotent stem cells from adult human fibrob

  14. Stemcell Information: SKIP001173 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available plication (CiRA), Kyoto University 京都大学iPS細胞研究所 Yamanaka Shinya 山中 伸弥 Information Only ... 18035408 10.1016/j.cell... line derived from a healthy individual dermal fibroblasts. 健常人の皮膚線維芽細胞由来のヒトiPS細胞株。 human ES-like Rese... iPS Cell Research and Application (CiRA), Kyoto University 京都大学iPS細胞研究所 Center for iPS Cell Research and Ap... SKIP001173 ... Normal 253F2 253F2 ... 36 30-39 Female ... -- No Human iPS cell....2007.11.019 Induction of pluripotent stem cells from adult human fibrob

  15. Stemcell Information: SKIP000863 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available nese Japanese -- No hiPSC Generation from Peripheral Blood by using non-T medium. 末梢血由来iPS細胞。|T細胞の増殖には関与しない培...a 沖田 圭介 Center for iPS Cell Research and Application, Kyoto University 京都大学iPS細胞研究所 ... Information Only Cen...ter for iPS Cell Research and Application, Kyoto University 京都大学iPS細胞研究所 ... 231...93063 10.1002/stem.1293 An efficient nonviral method to generate integration-free human-induced pluripotent stem cell...s from cord blood and peripheral blood cells. Okita K, Yamakawa T, Matsumura Y, Sato Y, Amano N, Wa

  16. Stemcell Information: SKIP000804 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available 610 ... 0-9 Male ... Yes No Hypochondrogenesis(S2011-43)-specific iPS cells. Ⅱ型コラーゲン異常症(軟骨低発生症)患者線維芽細胞(S2011-43)由来iPS細胞...r for iPS Cell Research and Application, Kyoto University 京都大学iPS細胞研究所 ... Information Only Center for iPS C...ell Research and Application,Kyoto University 京都大学iPS細胞研究所 CiRA https://www.cira.kyoto-u.ac.jp/e/index.html ...ia by directed conversion and induced pluripotent stem cells. Okada M, Ikegawa S, Morioka M, Yamashita A, Sa

  17. Stemcell Information: SKIP001164 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available plication (CiRA), Kyoto University 京都大学iPS細胞研究所 Yamanaka Shinya 山中 伸弥 Information Only ... 18035408 10.1016/j.cell... line derived from a healthy individual dermal fibroblasts. 健常人の皮膚線維芽細胞由来のヒトiPS細胞株。 human ES-like Rese... iPS Cell Research and Application (CiRA), Kyoto University 京都大学iPS細胞研究所 Center for iPS Cell Research and Ap... SKIP001164 ... Normal 246B1 246B1 ... 36 30-39 Female ... -- No Human iPS cell....2007.11.019 Induction of pluripotent stem cells from adult human fibrob

  18. Stemcell Information: SKIP000805 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available 610 ... 0-9 Male ... Yes No Hypochondrogenesis(S2011-43)-specific iPS cells. Ⅱ型コラーゲン異常症(軟骨低発生症)患者線維芽細胞(S2011-43)由来iPS細胞...r for iPS Cell Research and Application, Kyoto University 京都大学iPS細胞研究所 ... Information Only Center for iPS C...ell Research and Application,Kyoto University 京都大学iPS細胞研究所 CiRA https://www.cira.kyoto-u.ac.jp/e/index.html ...ia by directed conversion and induced pluripotent stem cells. Okada M, Ikegawa S, Morioka M, Yamashita A, Sa

  19. Stemcell Information: SKIP000798 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available II (ACG2) ... 200610 ... Fetus Female ... Yes No ACG II(GM07892)-specific iPS cells 軟骨無発生症患者線維芽細胞(GM07892)由来iPS細胞...S Cell Research and Application, Kyoto University 京都大学iPS細胞研究所 ... Information Only Center for iPS Cell Rese...arch and Application,Kyoto University 京都大学iPS細胞研究所 CiRA https://www.cira.kyoto-u.ac.jp/e/index.html ... 2518...rected conversion and induced pluripotent stem cells. Okada M, Ikegawa S, Morioka M, Yamashita A, Saito A, S

  20. Stemcell Information: SKIP000824 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available line, derived from fibloblast(JCRB TIG107). TIG107線維芽細胞由来iPS細胞。エピゾーマルベクターによる樹立、導入細胞...and ... No ... Keisuke Okita 沖田 圭介 Center for iPS Cell Research and Application, Kyoto University 京都大学iPS細胞研究所 ...Center for iPS Cell Research and Application, Kyoto University 京都大学iPS細胞研究所 Shiny...a Yamanaka 山中伸弥 Information Only Center for iPS Cell Research and Application, Kyoto University 京都大学iPS細胞研究所... SKIP000824 ... Normal 421C-1 421C-1 ... 81 80-89 Female Japanese Japanese -- No Human iPS cell

  1. Stemcell Information: SKIP001098 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available line derived from a neonate.(789013 KURABO)| 新生児皮膚繊維芽細胞(789013 KURABO)由来iPS細胞 human ES-like Res...ication, Kyoto University 京都大学iPS細胞研究所 ... Information Only Center for iPS Cell Research and Application,Kyoto University 京都大学iPS細胞... SKIP001098 ... Normal WT-2-#31 WT-2-#31 ... 0-9 Male ... -- No Nomal human iPS cell... Modeling type II collagenopathy skeletal dysplasia by directed conversion and in...duced pluripotent stem cells. Okada M, Ikegawa S, Morioka M, Yamashita A, Saito A, Sawai H, Murotsuki J, Oha

  2. Stemcell Information: SKIP001166 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available plication (CiRA), Kyoto University 京都大学iPS細胞研究所 Yamanaka Shinya 山中 伸弥 Information Only ... 18035408 10.1016/j.cell... line derived from a healthy individual dermal fibroblasts. 健常人の皮膚線維芽細胞由来のヒトiPS細胞株。 human ES-like Rese... iPS Cell Research and Application (CiRA), Kyoto University 京都大学iPS細胞研究所 Center for iPS Cell Research and Ap... SKIP001166 ... Normal 246B3 246B3 ... 36 30-39 Female ... -- No Human iPS cell....2007.11.019 Induction of pluripotent stem cells from adult human fibrob

  3. Stemcell Information: SKIP000802 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available pe II (ACG2) ... 200610 ... 0-9 Male ... Yes No ACG II(S2011-46)-specific iPS cells. Ⅱ型コラーゲン異常症患者線維芽細胞(S2011-46)由来iPS細胞...or iPS Cell Research and Application, Kyoto University 京都大学iPS細胞研究所 ... Information Only Center for iPS Cell... Research and Application,Kyoto University 京都大学iPS細胞研究所 CiRA https://www.cira.kyoto-u.ac.jp/e/index.html ... ...by directed conversion and induced pluripotent stem cells. Okada M, Ikegawa S, Morioka M, Yamashita A, Saito

  4. Stemcell Information: SKIP000803 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available 610 ... 0-9 Male ... Yes No Hypochondrogenesis(S2011-43)-specific iPS cells. Ⅱ型コラーゲン異常症(軟骨低発生症)患者線維芽細胞(S2011-43)由来iPS細胞...r for iPS Cell Research and Application, Kyoto University 京都大学iPS細胞研究所 ... Information Only Center for iPS C...ell Research and Application,Kyoto University 京都大学iPS細胞研究所 CiRA https://www.cira.kyoto-u.ac.jp/e/index.html ...ia by directed conversion and induced pluripotent stem cells. Okada M, Ikegawa S, Morioka M, Yamashita A, Sa

  5. Stemcell Information: SKIP000796 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available s (iPSCs) 脊髄性筋萎縮症(Coriell GM03813)患者由来のiPS細胞 human ES-like Research Grade Other OCT...(CiRA), Kyoto University 京都大学iPS細胞研究所 ... Information Only Department of Clinical... Application, Center for iPS Cell Research and Application (CiRA), Kyoto University 京都大学iPS細胞研究所 http://www.... ATROPHY I; SMA1 253300 ... 3 0-9 Male ... Yes No SMA patient(Coriell IDs GM03813 Fibroblast)-derived induced pluripotent stem cell...3/4, SOX2, KLF4, L-MYC, LIN28 and p53 shRNA ... Yes SNL or MEF embryonic stem cell m

  6. Stemcell Information: SKIP000862 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available nese Japanese -- No hiPSC Generation from Peripheral Blood by using non-T medium. 末梢血由来iPS細胞。|T細胞の増殖には関与しない培...suke Okita 沖田 圭介 Center for iPS Cell Research and Application, Kyoto University 京都大学iPS細胞研究所 ... Information... Only Center for iPS Cell Research and Application, Kyoto University 京都大学iPS細胞研究所... ... 23193063 10.1002/stem.1293 An efficient nonviral method to generate integration-free human-induced pluripotent stem cell...s from cord blood and peripheral blood cells. Okita K, Yamakawa T, Matsumura Y, Sato Y, Am

  7. Stemcell Information: SKIP001175 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available plication (CiRA), Kyoto University 京都大学iPS細胞研究所 Yamanaka Shinya 山中 伸弥 Information Only ... 18035408 10.1016/j.cell... line derived from a healthy individual dermal fibroblasts. 健常人の皮膚線維芽細胞由来のヒトiPS細胞株。 human ES-like Rese... iPS Cell Research and Application (CiRA), Kyoto University 京都大学iPS細胞研究所 Center for iPS Cell Research and Ap... SKIP001175 ... Normal 253F4 253F4 ... 36 30-39 Female ... -- No Human iPS cell....2007.11.019 Induction of pluripotent stem cells from adult human fibrob

  8. Stemcell Information: SKIP000858 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available to stimulate the proliferation of T cells. 末梢血由来iPS細胞。|T細胞の増殖を刺激する条件で作製を行った。 human ES-like Research Grade P... data suggested that the four iPS clones were derived from αβT cells.|αβT細胞由来であることを確認| ...ication, Kyoto University 京都大学iPS細胞研究所 ... Information Only Center for iPS Cell Research and Application, Kyoto University 京都大学iPS細胞...an-induced pluripotent stem cells from cord blood and peripheral blood cells.--Cell Therapy Using Human Indu... TRA locus and is excised coincident with TRA rearrangement during the maturation of αβT cells. Hence, these

  9. Stemcell Information: SKIP001167 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available plication (CiRA), Kyoto University 京都大学iPS細胞研究所 Yamanaka Shinya 山中 伸弥 Information Only ... 18035408 10.1016/j.cell... line derived from a healthy individual dermal fibroblasts. 健常人の皮膚線維芽細胞由来のヒトiPS細胞株。 human ES-like Rese... iPS Cell Research and Application (CiRA), Kyoto University 京都大学iPS細胞研究所 Center for iPS Cell Research and Ap... SKIP001167 ... Normal 246B5 246B5 ... 36 30-39 Female ... -- No Human iPS cell....2007.11.019 Induction of pluripotent stem cells from adult human fibrob

  10. Stemcell Information: SKIP001162 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available Research and Application (CiRA), Kyoto University 京都大学iPS細胞研究所 Yamanaka Shinya 山中 伸弥 Information Only ... 18035408 10.1016/j.cell... line derived from a healthy individual dermal fibroblasts. 健常人の皮膚線維芽細胞由来のヒトiPS細胞株。 human ES-like Rese...山中 伸弥 Center for iPS Cell Research and Application (CiRA), Kyoto University 京都大学iPS細胞研究所 Center for iPS Cell... SKIP001162 ... Normal 201B3 201B3 ... 36 30-39 Female ... -- No Human iPS cell....2007.11.019 Induction of pluripotent stem cells from ad

  11. Stemcell Information: SKIP000821 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available line, derived from fibloblast(Cell applications Inc. Lot1388). Lot1388線維芽細胞由来iPS細胞。エピゾーマルベクターによる樹立、導入細胞...No ... No ... Keisuke Okita 沖田 圭介 Center for iPS Cell Research and Application, Kyoto University 京都大学iPS細胞研究所 ...Center for iPS Cell Research and Application, Kyoto University 京都大学iPS細胞研究所 Shiny...a Yamanaka 山中伸弥 Information Only Center for iPS Cell Research and Application, Kyoto University 京都大学iPS細胞研究所... SKIP000821 ... Normal 404C-2 404C-2 ... 36 30-39 Female ... -- No Human iPS cell

  12. Stemcell Information: SKIP000800 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available type II (ACG2) ... 200610 ... 0-9 Male ... Yes No ACG II(S2011-46)-specific iPS cells. Ⅱ型コラーゲン異常症患者線維芽細胞(S2011-46)由来iPS細胞...r for iPS Cell Research and Application, Kyoto University 京都大学iPS細胞研究所 ... Information Only Center for iPS C...ell Research and Application,Kyoto University 京都大学iPS細胞研究所 CiRA https://www.cira.kyoto-u.ac.jp/e/index.html ...ia by directed conversion and induced pluripotent stem cells. Okada M, Ikegawa S, Morioka M, Yamashita A, Sa

  13. Stemcell Information: SKIP001100 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available line derived from a neonate.(789013 KURABO)| 新生児皮膚繊維芽細胞(789013 KURABO)由来iPS細胞 human ES-like Res...ication, Kyoto University 京都大学iPS細胞研究所 ... Information Only Center for iPS Cell Research and Application,Kyoto University 京都大学iPS細胞... SKIP001100 ... Normal WT-2-#33 WT-2-#33 ... 0-9 Male ... -- No Nomal human iPS cell... Modeling type II collagenopathy skeletal dysplasia by directed conversion and in...duced pluripotent stem cells. Okada M, Ikegawa S, Morioka M, Yamashita A, Saito A, Sawai H, Murotsuki J, Oha

  14. Coupling an Unstructured NoSQL Database with a Geographic Information System

    OpenAIRE

    Holemans, Amandine; Kasprzyk, Jean-Paul; Donnay, Jean-Paul

    2018-01-01

    The management of unstructured NoSQL (Not only Structured Query Language) databases has undergone a great development in the last years mainly thanks to Big Data. Nevertheless, the specificity of spatial information is not purposely taken into account. To overcome this difficulty, we propose to couple a NoSQL database with a spatial Relational Data Base Management System (RDBMS). Exchanges of information between these two systems are illustrated with relevant examples ...

  15. Database system of geological information for geological evaluation base of NPP sites(I)

    International Nuclear Information System (INIS)

    Lim, C. B.; Choi, K. R.; Sim, T. M.; No, M. H.; Lee, H. W.; Kim, T. K.; Lim, Y. S.; Hwang, S. K.

    2002-01-01

    This study aims to provide database system for site suitability analyses of geological information and a processing program for domestic NPP site evaluation. This database system program includes MapObject provided by ESRI and Spread 3.5 OCX, and is coded with Visual Basic language. Major functions of the systematic database program includes vector and raster farmat topographic maps, database design and application, geological symbol plot, the database search for the plotted geological symbol, and so on. The program can also be applied in analyzing not only for lineament trends but also for statistic treatment from geologically site and laboratory information and sources in digital form and algorithm, which is usually used internationally

  16. The Coral Trait Database, a curated database of trait information for coral species from the global oceans

    Science.gov (United States)

    Madin, Joshua S.; Anderson, Kristen D.; Andreasen, Magnus Heide; Bridge, Tom C. L.; Cairns, Stephen D.; Connolly, Sean R.; Darling, Emily S.; Diaz, Marcela; Falster, Daniel S.; Franklin, Erik C.; Gates, Ruth D.; Hoogenboom, Mia O.; Huang, Danwei; Keith, Sally A.; Kosnik, Matthew A.; Kuo, Chao-Yang; Lough, Janice M.; Lovelock, Catherine E.; Luiz, Osmar; Martinelli, Julieta; Mizerek, Toni; Pandolfi, John M.; Pochon, Xavier; Pratchett, Morgan S.; Putnam, Hollie M.; Roberts, T. Edward; Stat, Michael; Wallace, Carden C.; Widman, Elizabeth; Baird, Andrew H.

    2016-03-01

    Trait-based approaches advance ecological and evolutionary research because traits provide a strong link to an organism’s function and fitness. Trait-based research might lead to a deeper understanding of the functions of, and services provided by, ecosystems, thereby improving management, which is vital in the current era of rapid environmental change. Coral reef scientists have long collected trait data for corals; however, these are difficult to access and often under-utilized in addressing large-scale questions. We present the Coral Trait Database initiative that aims to bring together physiological, morphological, ecological, phylogenetic and biogeographic trait information into a single repository. The database houses species- and individual-level data from published field and experimental studies alongside contextual data that provide important framing for analyses. In this data descriptor, we release data for 56 traits for 1547 species, and present a collaborative platform on which other trait data are being actively federated. Our overall goal is for the Coral Trait Database to become an open-source, community-led data clearinghouse that accelerates coral reef research.

  17. The Coral Trait Database, a curated database of trait information for coral species from the global oceans.

    Science.gov (United States)

    Madin, Joshua S; Anderson, Kristen D; Andreasen, Magnus Heide; Bridge, Tom C L; Cairns, Stephen D; Connolly, Sean R; Darling, Emily S; Diaz, Marcela; Falster, Daniel S; Franklin, Erik C; Gates, Ruth D; Harmer, Aaron; Hoogenboom, Mia O; Huang, Danwei; Keith, Sally A; Kosnik, Matthew A; Kuo, Chao-Yang; Lough, Janice M; Lovelock, Catherine E; Luiz, Osmar; Martinelli, Julieta; Mizerek, Toni; Pandolfi, John M; Pochon, Xavier; Pratchett, Morgan S; Putnam, Hollie M; Roberts, T Edward; Stat, Michael; Wallace, Carden C; Widman, Elizabeth; Baird, Andrew H

    2016-03-29

    Trait-based approaches advance ecological and evolutionary research because traits provide a strong link to an organism's function and fitness. Trait-based research might lead to a deeper understanding of the functions of, and services provided by, ecosystems, thereby improving management, which is vital in the current era of rapid environmental change. Coral reef scientists have long collected trait data for corals; however, these are difficult to access and often under-utilized in addressing large-scale questions. We present the Coral Trait Database initiative that aims to bring together physiological, morphological, ecological, phylogenetic and biogeographic trait information into a single repository. The database houses species- and individual-level data from published field and experimental studies alongside contextual data that provide important framing for analyses. In this data descriptor, we release data for 56 traits for 1547 species, and present a collaborative platform on which other trait data are being actively federated. Our overall goal is for the Coral Trait Database to become an open-source, community-led data clearinghouse that accelerates coral reef research.

  18. Stemcell Information: SKIP001103 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available SKIP001103 ... induced chondrogenic (iChon) cells ダイレクトリプログラミングで作製した軟骨細胞 ... Diseased ...s have elevated ER stress and undergo apoptosis. 軟骨無発症患者線維芽細胞(GM07892)をダイレクトリプログラミングにより軟骨細胞...へと誘導(iChon細胞)。|小胞体ストレスが生じ、過度のアポトーシスが引き起こされていた。 Other Research Grade Retrovirus c-MYC, KLF4... ... Minoru Okada 岡田 稔 Center for iPS Cell Research and Application, Kyoto University 京都大学iPS細胞研究所... ... Information Only Center for iPS Cell Research and Application,Kyoto University 京都大学iPS細胞研究所 CiRA https:

  19. Stemcell Information: SKIP001101 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available SKIP001101 ... o induced chondrogenic (iChon) cells ダイレクトリプログラミングで作製した軟骨細胞 ... Normal ...man Dermal Fibroblasts(1439 KURABO). 新生児皮膚繊維芽細胞(1439 KURABO)をダイレクトリプログラミングにより軟骨細胞へと誘導(iChon細胞) Other Researc... Kyoto University 京都大学iPS細胞研究所 ... Information Only Center for iPS Cell Research ...and Application,Kyoto University 京都大学iPS細胞研究所 CiRA https://www.cira.kyoto-u.ac.jp/e/index.html ... 25187577 ...WT-1-iChon WT-1-iChon ... 0-9 Male ... -- No Direct iInduction of Chondrogenic(iChon) cells from Hu

  20. Stemcell Information: SKIP001102 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available SKIP001102 ... induced chondrogenic (iChon) cells ダイレクトリプログラミングで作製した軟骨細胞 ... Normal WT...n Dermal Fibroblasts(789013 KURABO). 新生児皮膚繊維芽細胞(789013 KURABO)をダイレクトリプログラミングにより軟骨細胞へと誘導(iChon細胞) Other Resea...n, Kyoto University 京都大学iPS細胞研究所 ... Information Only Center for iPS Cell Researc...h and Application,Kyoto University 京都大学iPS細胞研究所 CiRA https://www.cira.kyoto-u.ac.jp/e/index.html ... 2518757...-2-iChon WT-2-iChon ... 0-9 Male ... -- No Direct iInduction of Chondrogenic(iChon) cells from Huma

  1. Use of Genomic Databases for Inquiry-Based Learning about Influenza

    Science.gov (United States)

    Ledley, Fred; Ndung'u, Eric

    2011-01-01

    The genome projects of the past decades have created extensive databases of biological information with applications in both research and education. We describe an inquiry-based exercise that uses one such database, the National Center for Biotechnology Information Influenza Virus Resource, to advance learning about influenza. This database…

  2. 75 FR 1749 - Syngenta Biotechnology, Inc.; Availability of Petition and Environmental Assessment for...

    Science.gov (United States)

    2010-01-13

    ...] Syngenta Biotechnology, Inc.; Availability of Petition and Environmental Assessment for Determination of... Health Inspection Service has received a petition from Syngenta Biotechnology, Inc., seeking a....gov ). FOR FURTHER INFORMATION CONTACT: Dr. Subray Hegde, Biotechnology Regulatory Services, APHIS...

  3. Report on the basic design of the FY 1998 technical information database; 1998 nendo gijutsu joho database no kihon sekkei hokokusho

    Energy Technology Data Exchange (ETDEWEB)

    NONE

    1999-03-01

    For the purpose of promoting the effective transfer of the results of technical development and the technical information distribution, study and basic design were conducted of a concept of the new technical database run by NEDO. In the study, the following were conducted to extract the subjects: analysis of examples of project databases such as CADDET, scientific technology research information (JCLEARING), evaluation/survey of the present situation of database users, etc. In the study of a concept of technical information database, clarified were the classification of information, definition of the details, finding-out of relations between various kinds of information, mechanism of collection/processing/storage/dispatch/exchange of information, role of NEDO, etc. In the basic design, as the NEDO technical information database viable for the moment, the rough design was conducted of the project information, information on result reports, and information on research institutes. Further, to handle in unity the database controlled in different method, studied were the applicability to the project database of the general combined concept, advantages, restricted items, etc. (NEDO)

  4. A proposal for a drug information database and text templates for generating package inserts

    Directory of Open Access Journals (Sweden)

    Okuya R

    2013-07-01

    Full Text Available Ryo Okuya,1 Masaomi Kimura,2 Michiko Ohkura,2 Fumito Tsuchiya3 1Graduate School of Engineering and Science, 2Faculty of Engineering, Shibaura Institute of Technology, Tokyo, 3School of Pharmacy, International University of Health and Welfare, Tokyo, Japan Abstract: To prevent prescription errors caused by information systems, a database to store complete and accurate drug information in a user-friendly format is needed. In previous studies, the primary method for obtaining data stored in a database is to extract drug information from package inserts by employing pattern matching or more sophisticated methods such as text mining. However, it is difficult to obtain a complete database because there is no strict rule concerning expressions used to describe drug information in package inserts. The authors' strategy was to first build a database and then automatically generate package inserts by embedding data in the database using templates. To create this database, the support of pharmaceutical companies to input accurate data is required. It is expected that this system will work, because these companies can earn merit for newly developed drugs to decrease the effort to create package inserts from scratch. This study designed the table schemata for the database and text templates to generate the package inserts. To handle the variety of drug-specific information in the package inserts, this information in drug composition descriptions was replaced with labels and the replacement descriptions utilizing cluster analysis were analyzed. To improve the method by which frequently repeated ingredient information and/or supplementary information are stored, the method was modified by introducing repeat tags in the templates to indicate repetition and improving the insertion of data into the database. The validity of this method was confirmed by inputting the drug information described in existing package inserts and checking that the method could

  5. Tailored patient information using a database system: Increasing patient compliance in a day surgery setting

    DEFF Research Database (Denmark)

    Grode, Jesper Nicolai Riis; Grode, Louise; Steinsøe, Ulla

    rehabilitation. The hospital is responsible of providing the patients with accurate information enabling the patient to prepare for surgery. Often patients are overloaded with uncoordinated information, letters and leaflets. The contribution of this project is a database system enabling health professionals...... to empower patients through tailored individualized information. Performing 6500 operations per year at our Day Surgery Centre, health professionals need a computer based system to create individualized information material. Health professionals must be able to adapt the information material quickly...... was established to support these requirements. A relational database system holds all information pieces in a granular, structured form. Each individual piece of information can be joined with other pieces thus supporting the tailoring of information. A web service layer caters for integration with output systems...

  6. Development of the severe accident risk information database management system SARD

    International Nuclear Information System (INIS)

    Ahn, Kwang Il; Kim, Dong Ha

    2003-01-01

    The main purpose of this report is to introduce essential features and functions of a severe accident risk information management system, SARD (Severe Accident Risk Database Management System) version 1.0, which has been developed in Korea Atomic Energy Research Institute, and database management and data retrieval procedures through the system. The present database management system has powerful capabilities that can store automatically and manage systematically the plant-specific severe accident analysis results for core damage sequences leading to severe accidents, and search intelligently the related severe accident risk information. For that purpose, the present database system mainly takes into account the plant-specific severe accident sequences obtained from the Level 2 Probabilistic Safety Assessments (PSAs), base case analysis results for various severe accident sequences (such as code responses and summary for key-event timings), and related sensitivity analysis results for key input parameters/models employed in the severe accident codes. Accordingly, the present database system can be effectively applied in supporting the Level 2 PSA of similar plants, for fast prediction and intelligent retrieval of the required severe accident risk information for the specific plant whose information was previously stored in the database system, and development of plant-specific severe accident management strategies

  7. Development of the severe accident risk information database management system SARD

    Energy Technology Data Exchange (ETDEWEB)

    Ahn, Kwang Il; Kim, Dong Ha

    2003-01-01

    The main purpose of this report is to introduce essential features and functions of a severe accident risk information management system, SARD (Severe Accident Risk Database Management System) version 1.0, which has been developed in Korea Atomic Energy Research Institute, and database management and data retrieval procedures through the system. The present database management system has powerful capabilities that can store automatically and manage systematically the plant-specific severe accident analysis results for core damage sequences leading to severe accidents, and search intelligently the related severe accident risk information. For that purpose, the present database system mainly takes into account the plant-specific severe accident sequences obtained from the Level 2 Probabilistic Safety Assessments (PSAs), base case analysis results for various severe accident sequences (such as code responses and summary for key-event timings), and related sensitivity analysis results for key input parameters/models employed in the severe accident codes. Accordingly, the present database system can be effectively applied in supporting the Level 2 PSA of similar plants, for fast prediction and intelligent retrieval of the required severe accident risk information for the specific plant whose information was previously stored in the database system, and development of plant-specific severe accident management strategies.

  8. Online drug databases: a new method to assess and compare inclusion of clinically relevant information.

    Science.gov (United States)

    Silva, Cristina; Fresco, Paula; Monteiro, Joaquim; Rama, Ana Cristina Ribeiro

    2013-08-01

    Evidence-Based Practice requires health care decisions to be based on the best available evidence. The model "Information Mastery" proposes that clinicians should use sources of information that have previously evaluated relevance and validity, provided at the point of care. Drug databases (DB) allow easy and fast access to information and have the benefit of more frequent content updates. Relevant information, in the context of drug therapy, is that which supports safe and effective use of medicines. Accordingly, the European Guideline on the Summary of Product Characteristics (EG-SmPC) was used as a standard to evaluate the inclusion of relevant information contents in DB. To develop and test a method to evaluate relevancy of DB contents, by assessing the inclusion of information items deemed relevant for effective and safe drug use. Hierarchical organisation and selection of the principles defined in the EGSmPC; definition of criteria to assess inclusion of selected information items; creation of a categorisation and quantification system that allows score calculation; calculation of relative differences (RD) of scores for comparison with an "ideal" database, defined as the one that achieves the best quantification possible for each of the information items; pilot test on a sample of 9 drug databases, using 10 drugs frequently associated in literature with morbidity-mortality and also being widely consumed in Portugal. Main outcome measure Calculate individual and global scores for clinically relevant information items of drug monographs in databases, using the categorisation and quantification system created. A--Method development: selection of sections, subsections, relevant information items and corresponding requisites; system to categorise and quantify their inclusion; score and RD calculation procedure. B--Pilot test: calculated scores for the 9 databases; globally, all databases evaluated significantly differed from the "ideal" database; some DB performed

  9. Integrated application of the database for airborne geophysical survey achievement information

    International Nuclear Information System (INIS)

    Ji Zengxian; Zhang Junwei

    2006-01-01

    The paper briefly introduces the database of information for airborne geophysical survey achievements. This database was developed on the platform of Microsoft Windows System with the technical methods of Visual C++ 6.0 and MapGIS. It is an information management system concerning airborne geophysical surveying achievements with perfect functions in graphic display, graphic cutting and output, query of data, printing of documents and reports, maintenance of database, etc. All information of airborne geophysical survey achievements in nuclear industry from 1972 to 2003 was embedded in. Based on regional geological map and Meso-Cenozoic basin map, the detailed statistical information of each airborne survey area, each airborne radioactive anomalous point and high field point can be presented visually by combining geological or basin research result. The successful development of this system will provide a fairly good base and platform for management of archives and data of airborne geophysical survey achievements in nuclear industry. (authors)

  10. Nonmaterialized Relations and the Support of Information Retrieval Applications by Relational Database Systems.

    Science.gov (United States)

    Lynch, Clifford A.

    1991-01-01

    Describes several aspects of the problem of supporting information retrieval system query requirements in the relational database management system (RDBMS) environment and proposes an extension to query processing called nonmaterialized relations. User interactions with information retrieval systems are discussed, and nonmaterialized relations are…

  11. Forest Vegetation Simulator translocation techniques with the Bureau of Land Management's Forest Vegetation Information system database

    Science.gov (United States)

    Timothy A. Bottomley

    2008-01-01

    The BLM uses a database, called the Forest Vegetation Information System (FORVIS), to store, retrieve, and analyze forest resource information on a majority of their forested lands. FORVIS also has the capability of easily transferring appropriate data electronically into Forest Vegetation Simulator (FVS) for simulation runs. Only minor additional data inputs or...

  12. Decision-Support Tools and Databases to Inform Regional Stormwater Utility Development in New England

    Science.gov (United States)

    Development of stormwater utilities requires information on existing stormwater infrastructure and impervious cover as well as costs and benefits of stormwater management options. US EPA has developed a suite of databases and tools that can inform decision-making by regional sto...

  13. Towards BioDBcore: a community-defined information specification for biological databases

    Science.gov (United States)

    Gaudet, Pascale; Bairoch, Amos; Field, Dawn; Sansone, Susanna-Assunta; Taylor, Chris; Attwood, Teresa K.; Bateman, Alex; Blake, Judith A.; Bult, Carol J.; Cherry, J. Michael; Chisholm, Rex L.; Cochrane, Guy; Cook, Charles E.; Eppig, Janan T.; Galperin, Michael Y.; Gentleman, Robert; Goble, Carole A.; Gojobori, Takashi; Hancock, John M.; Howe, Douglas G.; Imanishi, Tadashi; Kelso, Janet; Landsman, David; Lewis, Suzanna E.; Mizrachi, Ilene Karsch; Orchard, Sandra; Ouellette, B. F. Francis; Ranganathan, Shoba; Richardson, Lorna; Rocca-Serra, Philippe; Schofield, Paul N.; Smedley, Damian; Southan, Christopher; Tan, Tin Wee; Tatusova, Tatiana; Whetzel, Patricia L.; White, Owen; Yamasaki, Chisato

    2011-01-01

    The present article proposes the adoption of a community-defined, uniform, generic description of the core attributes of biological databases, BioDBCore. The goals of these attributes are to provide a general overview of the database landscape, to encourage consistency and interoperability between resources and to promote the use of semantic and syntactic standards. BioDBCore will make it easier for users to evaluate the scope and relevance of available resources. This new resource will increase the collective impact of the information present in biological databases. PMID:21097465

  14. YAC clone information - RGP physicalmap | LSDB Archive [Life Science Database Archive metadata

    Lifescience Database Archive (English)

    Full Text Available 08/lsdba.nbdc00318-06-002 Description of data contents YAC clones selected with DNA markers Data file File name: rgp_physical...map_yac_clones.zip File URL: ftp://ftp.biosciencedbc.jp/archive/rgp-physicalmap/LATEST/rgp_physical...sciencedbc.jp/togodb/view/rgp_physicalmap_yac_clones#en Data acquisition method YAC clones selected with RGP...rom. No. Chromosome number Region Region number Physical map image The file name of rice physical map Order ...bout This Database Database Description Download License Update History of This Database Site Policy | Contact Us YAC clone information - RGP physicalmap | LSDB Archive ...

  15. Seventy Years of RN Effectiveness: A Database Development Project to Inform Best Practice.

    Science.gov (United States)

    Lulat, Zainab; Blain-McLeod, Julie; Grinspun, Doris; Penney, Tasha; Harripaul-Yhap, Anastasia; Rey, Michelle

    2018-03-23

    The appropriate nursing staff mix is imperative to the provision of quality care. Nurse staffing levels and staff mix vary from country to country, as well as between care settings. Understanding how staffing skill mix impacts patient, organizational, and financial outcomes is critical in order to allow policymakers and clinicians to make evidence-informed staffing decisions. This paper reports on the methodology for creation of an electronic database of studies exploring the effectiveness of Registered Nurses (RNs) on clinical and patient outcomes, organizational and nurse outcomes, and financial outcomes. Comprehensive literature searches were conducted in four electronic databases. Inclusion criteria for the database included studies published from 1946 to 2016, peer-reviewed international literature, and studies focused on RNs in all health-care disciplines, settings, and sectors. Masters-prepared nurse researchers conducted title and abstract screening and relevance review to determine eligibility of studies for the database. High-level analysis was conducted to determine key outcomes and the frequency at which they appeared within the database. Of the initial 90,352 records, a total of 626 abstracts were included within the database. Studies were organized into three groups corresponding to clinical and patient outcomes, organizational and nurse-related outcomes, and financial outcomes. Organizational and nurse-related outcomes represented the largest category in the database with 282 studies, followed by clinical and patient outcomes with 244 studies, and lastly financial outcomes, which included 124 studies. The comprehensive database of evidence for RN effectiveness is freely available at https://rnao.ca/bpg/initiatives/RNEffectiveness. The database will serve as a resource for the Registered Nurses' Association of Ontario, as well as a tool for researchers, clinicians, and policymakers for making evidence-informed staffing decisions. © 2018 The Authors

  16. [Construction of chemical information database based on optical structure recognition technique].

    Science.gov (United States)

    Lv, C Y; Li, M N; Zhang, L R; Liu, Z M

    2018-04-18

    To create a protocol that could be used to construct chemical information database from scientific literature quickly and automatically. Scientific literature, patents and technical reports from different chemical disciplines were collected and stored in PDF format as fundamental datasets. Chemical structures were transformed from published documents and images to machine-readable data by using the name conversion technology and optical structure recognition tool CLiDE. In the process of molecular structure information extraction, Markush structures were enumerated into well-defined monomer molecules by means of QueryTools in molecule editor ChemDraw. Document management software EndNote X8 was applied to acquire bibliographical references involving title, author, journal and year of publication. Text mining toolkit ChemDataExtractor was adopted to retrieve information that could be used to populate structured chemical database from figures, tables, and textual paragraphs. After this step, detailed manual revision and annotation were conducted in order to ensure the accuracy and completeness of the data. In addition to the literature data, computing simulation platform Pipeline Pilot 7.5 was utilized to calculate the physical and chemical properties and predict molecular attributes. Furthermore, open database ChEMBL was linked to fetch known bioactivities, such as indications and targets. After information extraction and data expansion, five separate metadata files were generated, including molecular structure data file, molecular information, bibliographical references, predictable attributes and known bioactivities. Canonical simplified molecular input line entry specification as primary key, metadata files were associated through common key nodes including molecular number and PDF number to construct an integrated chemical information database. A reasonable construction protocol of chemical information database was created successfully. A total of 174 research

  17. A database system for the management of severe accident risk information, SARD

    International Nuclear Information System (INIS)

    Ahn, K. I.; Kim, D. H.

    2003-01-01

    The purpose of this paper is to introduce main features and functions of a PC Windows-based database management system, SARD, which has been developed at Korea Atomic Energy Research Institute for automatic management and search of the severe accident risk information. Main functions of the present database system are implemented by three closely related, but distinctive modules: (1) fixing of an initial environment for data storage and retrieval, (2) automatic loading and management of accident information, and (3) automatic search and retrieval of accident information. For this, the present database system manipulates various form of the plant-specific severe accident risk information, such as dominant severe accident sequences identified from the plant-specific Level 2 Probabilistic Safety Assessment (PSA) and accident sequence-specific information obtained from the representative severe accident codes (e.g., base case and sensitivity analysis results, and summary for key plant responses). The present database system makes it possible to implement fast prediction and intelligent retrieval of the required severe accident risk information for various accident sequences, and in turn it can be used for the support of the Level 2 PSA of similar plants and for the development of plant-specific severe accident management strategies

  18. A database system for the management of severe accident risk information, SARD

    Energy Technology Data Exchange (ETDEWEB)

    Ahn, K. I.; Kim, D. H. [KAERI, Taejon (Korea, Republic of)

    2003-10-01

    The purpose of this paper is to introduce main features and functions of a PC Windows-based database management system, SARD, which has been developed at Korea Atomic Energy Research Institute for automatic management and search of the severe accident risk information. Main functions of the present database system are implemented by three closely related, but distinctive modules: (1) fixing of an initial environment for data storage and retrieval, (2) automatic loading and management of accident information, and (3) automatic search and retrieval of accident information. For this, the present database system manipulates various form of the plant-specific severe accident risk information, such as dominant severe accident sequences identified from the plant-specific Level 2 Probabilistic Safety Assessment (PSA) and accident sequence-specific information obtained from the representative severe accident codes (e.g., base case and sensitivity analysis results, and summary for key plant responses). The present database system makes it possible to implement fast prediction and intelligent retrieval of the required severe accident risk information for various accident sequences, and in turn it can be used for the support of the Level 2 PSA of similar plants and for the development of plant-specific severe accident management strategies.

  19. MIPS: a database for protein sequences, homology data and yeast genome information.

    Science.gov (United States)

    Mewes, H W; Albermann, K; Heumann, K; Liebl, S; Pfeiffer, F

    1997-01-01

    The MIPS group (Martinsried Institute for Protein Sequences) at the Max-Planck-Institute for Biochemistry, Martinsried near Munich, Germany, collects, processes and distributes protein sequence data within the framework of the tripartite association of the PIR-International Protein Sequence Database (,). MIPS contributes nearly 50% of the data input to the PIR-International Protein Sequence Database. The database is distributed on CD-ROM together with PATCHX, an exhaustive supplement of unique, unverified protein sequences from external sources compiled by MIPS. Through its WWW server (http://www.mips.biochem.mpg.de/ ) MIPS permits internet access to sequence databases, homology data and to yeast genome information. (i) Sequence similarity results from the FASTA program () are stored in the FASTA database for all proteins from PIR-International and PATCHX. The database is dynamically maintained and permits instant access to FASTA results. (ii) Starting with FASTA database queries, proteins have been classified into families and superfamilies (PROT-FAM). (iii) The HPT (hashed position tree) data structure () developed at MIPS is a new approach for rapid sequence and pattern searching. (iv) MIPS provides access to the sequence and annotation of the complete yeast genome (), the functional classification of yeast genes (FunCat) and its graphical display, the 'Genome Browser' (). A CD-ROM based on the JAVA programming language providing dynamic interactive access to the yeast genome and the related protein sequences has been compiled and is available on request. PMID:9016498

  20. Northeast India Helminth Parasite Information Database (NEIHPID: Knowledge Base for Helminth Parasites.

    Directory of Open Access Journals (Sweden)

    Devendra Kumar Biswal

    Full Text Available Most metazoan parasites that invade vertebrate hosts belong to three phyla: Platyhelminthes, Nematoda and Acanthocephala. Many of the parasitic members of these phyla are collectively known as helminths and are causative agents of many debilitating, deforming and lethal diseases of humans and animals. The North-East India Helminth Parasite Information Database (NEIHPID project aimed to document and characterise the spectrum of helminth parasites in the north-eastern region of India, providing host, geographical distribution, diagnostic characters and image data. The morphology-based taxonomic data are supplemented with information on DNA sequences of nuclear, ribosomal and mitochondrial gene marker regions that aid in parasite identification. In addition, the database contains raw next generation sequencing (NGS data for 3 foodborne trematode parasites, with more to follow. The database will also provide study material for students interested in parasite biology. Users can search the database at various taxonomic levels (phylum, class, order, superfamily, family, genus, and species, or by host, habitat and geographical location. Specimen collection locations are noted as co-ordinates in a MySQL database and can be viewed on Google maps, using Google Maps JavaScript API v3. The NEIHPID database has been made freely available at http://nepiac.nehu.ac.in/index.php.

  1. Northeast India Helminth Parasite Information Database (NEIHPID): Knowledge Base for Helminth Parasites.

    Science.gov (United States)

    Biswal, Devendra Kumar; Debnath, Manish; Kharumnuid, Graciously; Thongnibah, Welfrank; Tandon, Veena

    2016-01-01

    Most metazoan parasites that invade vertebrate hosts belong to three phyla: Platyhelminthes, Nematoda and Acanthocephala. Many of the parasitic members of these phyla are collectively known as helminths and are causative agents of many debilitating, deforming and lethal diseases of humans and animals. The North-East India Helminth Parasite Information Database (NEIHPID) project aimed to document and characterise the spectrum of helminth parasites in the north-eastern region of India, providing host, geographical distribution, diagnostic characters and image data. The morphology-based taxonomic data are supplemented with information on DNA sequences of nuclear, ribosomal and mitochondrial gene marker regions that aid in parasite identification. In addition, the database contains raw next generation sequencing (NGS) data for 3 foodborne trematode parasites, with more to follow. The database will also provide study material for students interested in parasite biology. Users can search the database at various taxonomic levels (phylum, class, order, superfamily, family, genus, and species), or by host, habitat and geographical location. Specimen collection locations are noted as co-ordinates in a MySQL database and can be viewed on Google maps, using Google Maps JavaScript API v3. The NEIHPID database has been made freely available at http://nepiac.nehu.ac.in/index.php.

  2. Northeast India Helminth Parasite Information Database (NEIHPID): Knowledge Base for Helminth Parasites

    Science.gov (United States)

    Debnath, Manish; Kharumnuid, Graciously; Thongnibah, Welfrank; Tandon, Veena

    2016-01-01

    Most metazoan parasites that invade vertebrate hosts belong to three phyla: Platyhelminthes, Nematoda and Acanthocephala. Many of the parasitic members of these phyla are collectively known as helminths and are causative agents of many debilitating, deforming and lethal diseases of humans and animals. The North-East India Helminth Parasite Information Database (NEIHPID) project aimed to document and characterise the spectrum of helminth parasites in the north-eastern region of India, providing host, geographical distribution, diagnostic characters and image data. The morphology-based taxonomic data are supplemented with information on DNA sequences of nuclear, ribosomal and mitochondrial gene marker regions that aid in parasite identification. In addition, the database contains raw next generation sequencing (NGS) data for 3 foodborne trematode parasites, with more to follow. The database will also provide study material for students interested in parasite biology. Users can search the database at various taxonomic levels (phylum, class, order, superfamily, family, genus, and species), or by host, habitat and geographical location. Specimen collection locations are noted as co-ordinates in a MySQL database and can be viewed on Google maps, using Google Maps JavaScript API v3. The NEIHPID database has been made freely available at http://nepiac.nehu.ac.in/index.php PMID:27285615

  3. Biotechnology Education and the Internet. ERIC Digest.

    Science.gov (United States)

    Lee, Thomas

    The world of modern biotechnology is based on recent developments in molecular biology, especially those in genetic engineering. Since this is a relatively new and rapidly advancing field of study, there are few traditional sources of information and activities. This digest highlights biotechnology resources including those that can be found on…

  4. The factographic database on atomic spectroscopy ''spectr-2'' for information service in the field of thermonuclear and quantum electronic investigations

    International Nuclear Information System (INIS)

    Bugaev, V.Yu.; Pal'chikov, V.G.; Skobelev, I.Yu.; Faenov, A.Ya.

    1990-01-01

    ''Spectr-2'' automated database in an extension of ''Spectr-1'' database developed in VNIIFTRI (USSR) for storage and rapid search of multicharged ions atomic characteristics. The information structure, the interaction of the terminal user and the information accumulation in this database are described. 4 figs

  5. Biotechnology organizations in action

    DEFF Research Database (Denmark)

    Norus, Jesper

    This volume analyzes the dynamics and interactive processes among the players (individuals, institutions, and organizations/firms) that have constituted and legitimized the development of the biotechnology industries. The unit of analysis is small entrepreneurial firms developing biotechnological...

  6. Visualizing information across multidimensional post-genomic structured and textual databases.

    Science.gov (United States)

    Tao, Ying; Friedman, Carol; Lussier, Yves A

    2005-04-15

    Visualizing relationships among biological information to facilitate understanding is crucial to biological research during the post-genomic era. Although different systems have been developed to view gene-phenotype relationships for specific databases, very few have been designed specifically as a general flexible tool for visualizing multidimensional genotypic and phenotypic information together. Our goal is to develop a method for visualizing multidimensional genotypic and phenotypic information and a model that unifies different biological databases in order to present the integrated knowledge using a uniform interface. We developed a novel, flexible and generalizable visualization tool, called PhenoGenesviewer (PGviewer), which in this paper was used to display gene-phenotype relationships from a human-curated database (OMIM) and from an automatic method using a Natural Language Processing tool called BioMedLEE. Data obtained from multiple databases were first integrated into a uniform structure and then organized by PGviewer. PGviewer provides a flexible query interface that allows dynamic selection and ordering of any desired dimension in the databases. Based on users' queries, results can be visualized using hierarchical expandable trees that present views specified by users according to their research interests. We believe that this method, which allows users to dynamically organize and visualize multiple dimensions, is a potentially powerful and promising tool that should substantially facilitate biological research. PhenogenesViewer as well as its support and tutorial are available at http://www.dbmi.columbia.edu/pgviewer/ Lussier@dbmi.columbia.edu.

  7. Construction of a bibliographic information database and a web directory for the nuclear science and engineering

    Energy Technology Data Exchange (ETDEWEB)

    Oh, Jeong Hoon; Kim, Tae Whan; Lee, Ji Ho; Chun, Young Chun; Yu, An Na

    2005-11-15

    The objective of this project is to construct the bibliographic information database and the web directory in the nuclear field. Its construction is very timely and important. Because nuclear science and technology has an considerable effect all over the other sciences and technologies due to its property of giant and complex engineering. We aimed to firmly build up a basis of efficient management of the bibliographic information database and the web directory in the nuclear field. The results of this project that we achieved in this year are as follows : first, construction of the bibliographic information database in the nuclear field(the target title: 1,500 titles ; research report: 1,000 titles, full-text report: 250 titles, full-text article: 250 titles). Second, completion of construction of the web directory in the nuclear field by using SWING (the total figure achieved : 2,613 titles). We plan that we will positively give more information to the general public interested in the nuclear field and to the experts of the field through this bibliographic information database on KAERI's home page, KAERI's electronic library and other related sites as well as participation at various seminars and meetings related to the nuclear field.

  8. Systems architecture: a new model for sustainability and the built environment using nanotechnology, biotechnology, information technology, and cognitive science with living technology.

    Science.gov (United States)

    Armstrong, Rachel

    2010-01-01

    This report details a workshop held at the Bartlett School of Architecture, University College London, to initiate interdisciplinary collaborations for the practice of systems architecture, which is a new model for the generation of sustainable architecture that combines the discipline of the study of the built environment with the scientific study of complexity, or systems science, and adopts the perspective of systems theory. Systems architecture offers new perspectives on the organization of the built environment that enable architects to consider architecture as a series of interconnected networks with embedded links into natural systems. The public workshop brought together architects and scientists working with the convergence of nanotechnology, biotechnology, information technology, and cognitive science and with living technology to investigate the possibility of a new generation of smart materials that are implied by this approach.

  9. 17th East European Conference on Advances in Databases and Information Systems and Associated Satellite Events

    CERN Document Server

    Cerquitelli, Tania; Chiusano, Silvia; Guerrini, Giovanna; Kämpf, Mirko; Kemper, Alfons; Novikov, Boris; Palpanas, Themis; Pokorný, Jaroslav; Vakali, Athena

    2014-01-01

    This book reports on state-of-art research and applications in the field of databases and information systems. It includes both fourteen selected short contributions, presented at the East-European Conference on Advances in Databases and Information Systems (ADBIS 2013, September 1-4, Genova, Italy), and twenty-six papers from ADBIS 2013 satellite events. The short contributions from the main conference are collected in the first part of the book, which covers a wide range of topics, like data management, similarity searches, spatio-temporal and social network data, data mining, data warehousing, and data management on novel architectures, such as graphics processing units, parallel database management systems, cloud and MapReduce environments. In contrast, the contributions from the satellite events are organized in five different parts, according to their respective ADBIS satellite event: BiDaTA 2013 - Special Session on Big Data: New Trends and Applications); GID 2013 – The Second International Workshop ...

  10. Patenting Biotechnological Inventions in Europe

    Directory of Open Access Journals (Sweden)

    Peter Raspor

    2002-01-01

    Full Text Available The patent system has been able to provide the protection for the achievements of different technologies and in that way it has supported further development and growth of the industry where those achievements were implemented. Modern technologies like information technology and biotechnology with genetic engineering that appeared in the 70s have overgrown the frames of the existing patent system because of their exponential development during the last thirty years. Industry that invests a huge amount of money in these technologies, especially in the field of biotechnology, where the results are very uncertain, has started to claim changes in the patent system.

  11. Historical land use databases: a new layer of information for geographical research

    NARCIS (Netherlands)

    Kramer, H.; Mücher, C.A.; Hazeu, G.W.

    2011-01-01

    In this paper we describe how historical land use information has been derived for the whole of Europe, using the World Atlas of Agriculture, scale 1: 2,500,000. This paper describes the process of converting the analog land-use maps to a digital European historical land-use database, the Historical

  12. Content-based organization of the information space in multi-database networks

    NARCIS (Netherlands)

    Papazoglou, M.; Milliner, S.

    1998-01-01

    Abstract. Rapid growth in the volume of network-available data, complexity, diversity and terminological fluctuations, at different data sources, render network-accessible information increasingly difficult to achieve. The situation is particularly cumbersome for users of multi-database systems who

  13. Operation environment construction of geological information database for high level radioactive waste geological disposal

    International Nuclear Information System (INIS)

    Wang Peng; Gao Min; Huang Shutao; Wang Shuhong; Zhao Yongan

    2014-01-01

    To fulfill the requirements of data storage and management in HLW geological disposal, a targeted construction method for data operation environment was proposed in this paper. The geological information database operation environment constructed by this method has its unique features. And it also will be the important support for HLW geological disposal project and management. (authors)

  14. 16th East-European Conference on Advances in Databases and Information Systems (ADBIS 2012)

    CERN Document Server

    Wojciechowski, Marek; New Trends in Databases and Information Systems

    2013-01-01

    Database and information systems technologies have been rapidly evolving in several directions over the past years. New types and kinds of data, new types of applications and information systems to support them raise diverse challenges to be addressed. The so-called big data challenge, streaming data management and processing, social networks and other complex data analysis, including semantic reasoning into information systems supporting for instance trading, negotiations, and bidding mechanisms are just some of the emerging research topics. This volume contains papers contributed by six workshops: ADBIS Workshop on GPUs in Databases (GID 2012), Mining Complex and Stream Data (MCSD'12), International Workshop on Ontologies meet Advanced Information Systems (OAIS'2012), Second Workshop on Modeling Multi-commodity Trade: Data models and processing (MMT'12), 1st ADBIS Workshop on Social Data Processing (SDP'12), 1st ADBIS Workshop on Social and Algorithmic Issues in Business Support (SAIBS), and the Ph.D. Conso...

  15. VaProS: a database-integration approach for protein/genome information retrieval

    KAUST Repository

    Gojobori, Takashi; Ikeo, Kazuho; Katayama, Yukie; Kawabata, Takeshi; Kinjo, Akira R.; Kinoshita, Kengo; Kwon, Yeondae; Migita, Ohsuke; Mizutani, Hisashi; Muraoka, Masafumi; Nagata, Koji; Omori, Satoshi; Sugawara, Hideaki; Yamada, Daichi; Yura, Kei

    2016-01-01

    Life science research now heavily relies on all sorts of databases for genome sequences, transcription, protein three-dimensional (3D) structures, protein–protein interactions, phenotypes and so forth. The knowledge accumulated by all the omics research is so vast that a computer-aided search of data is now a prerequisite for starting a new study. In addition, a combinatory search throughout these databases has a chance to extract new ideas and new hypotheses that can be examined by wet-lab experiments. By virtually integrating the related databases on the Internet, we have built a new web application that facilitates life science researchers for retrieving experts’ knowledge stored in the databases and for building a new hypothesis of the research target. This web application, named VaProS, puts stress on the interconnection between the functional information of genome sequences and protein 3D structures, such as structural effect of the gene mutation. In this manuscript, we present the notion of VaProS, the databases and tools that can be accessed without any knowledge of database locations and data formats, and the power of search exemplified in quest of the molecular mechanisms of lysosomal storage disease. VaProS can be freely accessed at http://p4d-info.nig.ac.jp/vapros/.

  16. VaProS: a database-integration approach for protein/genome information retrieval

    KAUST Repository

    Gojobori, Takashi

    2016-12-24

    Life science research now heavily relies on all sorts of databases for genome sequences, transcription, protein three-dimensional (3D) structures, protein–protein interactions, phenotypes and so forth. The knowledge accumulated by all the omics research is so vast that a computer-aided search of data is now a prerequisite for starting a new study. In addition, a combinatory search throughout these databases has a chance to extract new ideas and new hypotheses that can be examined by wet-lab experiments. By virtually integrating the related databases on the Internet, we have built a new web application that facilitates life science researchers for retrieving experts’ knowledge stored in the databases and for building a new hypothesis of the research target. This web application, named VaProS, puts stress on the interconnection between the functional information of genome sequences and protein 3D structures, such as structural effect of the gene mutation. In this manuscript, we present the notion of VaProS, the databases and tools that can be accessed without any knowledge of database locations and data formats, and the power of search exemplified in quest of the molecular mechanisms of lysosomal storage disease. VaProS can be freely accessed at http://p4d-info.nig.ac.jp/vapros/.

  17. Use of national clinical databases for informing and for evaluating health care policies.

    Science.gov (United States)

    Black, Nick; Tan, Stefanie

    2013-02-01

    Policy-makers and analysts could make use of national clinical databases either to inform or to evaluate meso-level (organisation and delivery of health care) and macro-level (national) policies. Reviewing the use of 15 of the best established databases in England, we identify and describe four published examples of each use. These show that policy-makers can either make use of the data itself or of research based on the database. For evaluating policies, the major advantages are the huge sample sizes available, the generalisability of the data, its immediate availability and historic information. The principal methodological challenges involve the need for risk adjustment and time-series analysis. Given their usefulness in the policy arena, there are several reasons why national clinical databases have not been used more, some due to a lack of 'push' by their custodians and some to the lack of 'pull' by policy-makers. Greater exploitation of these valuable resources would be facilitated by policy-makers' and custodians' increased awareness, minimisation of legal restrictions on data use, improvements in the quality of databases and a library of examples of applications to policy. Copyright © 2012 Elsevier Ireland Ltd. All rights reserved.

  18. Demonstration of SLUMIS: a clinical database and management information system for a multi organ transplant program.

    OpenAIRE

    Kurtz, M.; Bennett, T.; Garvin, P.; Manuel, F.; Williams, M.; Langreder, S.

    1991-01-01

    Because of the rapid evolution of the heart, heart/lung, liver, kidney and kidney/pancreas transplant programs at our institution, and because of a lack of an existing comprehensive database, we were required to develop a computerized management information system capable of supporting both clinical and research requirements of a multifaceted transplant program. SLUMIS (ST. LOUIS UNIVERSITY MULTI-ORGAN INFORMATION SYSTEM) was developed for the following reasons: 1) to comply with the reportin...

  19. A Reaction Database for Small Molecule Pharmaceutical Processes Integrated with Process Information

    DEFF Research Database (Denmark)

    Papadakis, Emmanouil; Anantpinijwatna, Amata; Woodley, John

    2017-01-01

    This article describes the development of a reaction database with the objective to collect data for multiphase reactions involved in small molecule pharmaceutical processes with a search engine to retrieve necessary data in investigations of reaction-separation schemes, such as the role of organic......; compounds participating in the reaction; use of organic solvents and their function; information for single step and multistep reactions; target products; reaction conditions and reaction data. Information for reactor scale-up together with information for the separation and other relevant information...

  20. Databases in welding engineering - definition and starting phase of the integrated welding engineering information system

    International Nuclear Information System (INIS)

    Barthelmess, H.; Queren, W.; Stracke, M.

    1989-01-01

    The structure and function of the Information AAssociation for Welding Engineering, newly established by the Deutscher Verband fuer Schweisstechnik, are presented. Examined are: special literature for welding techniques - value and prospects; databases accessible to the public for information on welding techniques; concept for the Information Association for Welding Engineering; the four phases to establish databasis for facts and expert systems of the Information Association for Welding Engineering; the pilot project 'MVT-Data base' (hot crack data base for data of modified varestraint-transvarestraint tests). (orig./MM) [de

  1. ExtraTrain: a database of Extragenic regions and Transcriptional information in prokaryotic organisms

    Science.gov (United States)

    Pareja, Eduardo; Pareja-Tobes, Pablo; Manrique, Marina; Pareja-Tobes, Eduardo; Bonal, Javier; Tobes, Raquel

    2006-01-01

    Background Transcriptional regulation processes are the principal mechanisms of adaptation in prokaryotes. In these processes, the regulatory proteins and the regulatory DNA signals located in extragenic regions are the key elements involved. As all extragenic spaces are putative regulatory regions, ExtraTrain covers all extragenic regions of available genomes and regulatory proteins from bacteria and archaea included in the UniProt database. Description ExtraTrain provides integrated and easily manageable information for 679816 extragenic regions and for the genes delimiting each of them. In addition ExtraTrain supplies a tool to explore extragenic regions, named Palinsight, oriented to detect and search palindromic patterns. This interactive visual tool is totally integrated in the database, allowing the search for regulatory signals in user defined sets of extragenic regions. The 26046 regulatory proteins included in ExtraTrain belong to the families AraC/XylS, ArsR, AsnC, Cold shock domain, CRP-FNR, DeoR, GntR, IclR, LacI, LuxR, LysR, MarR, MerR, NtrC/Fis, OmpR and TetR. The database follows the InterPro criteria to define these families. The information about regulators includes manually curated sets of references specifically associated to regulator entries. In order to achieve a sustainable and maintainable knowledge database ExtraTrain is a platform open to the contribution of knowledge by the scientific community providing a system for the incorporation of textual knowledge. Conclusion ExtraTrain is a new database for exploring Extragenic regions and Transcriptional information in bacteria and archaea. ExtraTrain database is available at . PMID:16539733

  2. Establishment of Low Energy Building materials and Equipment Database Based on Property Information

    Science.gov (United States)

    Kim, Yumin; Shin, Hyery; eon Lee, Seung

    2018-03-01

    The purpose of this study is to provide reliable service of materials information portal through the establishment of public big data by collecting and integrating scattered low energy building materials and equipment data. There were few cases of low energy building materials database in Korea have provided material properties as factors influencing material pricing. The framework of the database was defined referred with Korea On-line E-procurement system. More than 45,000 data were gathered by the specification of entities and with the gathered data, price prediction models for chillers were suggested. To improve the usability of the prediction model, detailed properties should be analysed for each item.

  3. Managing Database Services: An Approach Based in Information Technology Services Availabilty and Continuity Management

    Directory of Open Access Journals (Sweden)

    Leonardo Bastos Pontes

    2017-01-01

    Full Text Available This paper is held in the information technology services management environment, with a few ideas of information technology governance, and purposes to implement a hybrid model to manage the services of a database, based on the principles of information technology services management in a supplementary health operator. This approach utilizes fundamental nuances of services management guides, such as CMMI for Services, COBIT, ISO 20000, ITIL and MPS.BR for Services; it studies harmonically Availability and Continuity Management, as most part of the guides also do. This work has its importance because it keeps a good flow in the database and improves the agility of the systems in the accredited clinics in the health plan.

  4. Data integration and knowledge discovery in biomedical databases. Reliable information from unreliable sources

    Directory of Open Access Journals (Sweden)

    A Mitnitski

    2003-01-01

    Full Text Available To better understand information about human health from databases we analyzed three datasets collected for different purposes in Canada: a biomedical database of older adults, a large population survey across all adult ages, and vital statistics. Redundancy in the variables was established, and this led us to derive a generalized (macroscopic state variable, being a fitness/frailty index that reflects both individual and group health status. Evaluation of the relationship between fitness/frailty and the mortality rate revealed that the latter could be expressed in terms of variables generally available from any cross-sectional database. In practical terms, this means that the risk of mortality might readily be assessed from standard biomedical appraisals collected for other purposes.

  5. Termites as targets and models for biotechnology.

    Science.gov (United States)

    Scharf, Michael E

    2015-01-07

    Termites have many unique evolutionary adaptations associated with their eusocial lifestyles. Recent omics research has created a wealth of new information in numerous areas of termite biology (e.g., caste polyphenism, lignocellulose digestion, and microbial symbiosis) with wide-ranging applications in diverse biotechnological niches. Termite biotechnology falls into two categories: (a) termite-targeted biotechnology for pest management purposes, and (b) termite-modeled biotechnology for use in various industrial applications. The first category includes several candidate termiticidal modes of action such as RNA interference, digestive inhibition, pathogen enhancement, antimicrobials, endocrine disruption, and primer pheromone mimicry. In the second category, termite digestomes are deep resources for host and symbiont lignocellulases and other enzymes with applications in a variety of biomass, industrial, and processing applications. Moving forward, one of the most important approaches for accelerating advances in both termite-targeted and termite-modeled biotechnology will be to consider host and symbiont together as a single functional unit.

  6. Automated granularity to integrate digital information: the "Antarctic Treaty Searchable Database" case study

    Directory of Open Access Journals (Sweden)

    Paul Arthur Berkman

    2006-06-01

    Full Text Available Access to information is necessary, but not sufficient in our digital era. The challenge is to objectively integrate digital resources based on user-defined objectives for the purpose of discovering information relationships that facilitate interpretations and decision making. The Antarctic Treaty Searchable Database (http://aspire.nvi.net, which is in its sixth edition, provides an example of digital integration based on the automated generation of information granules that can be dynamically combined to reveal objective relationships within and between digital information resources. This case study further demonstrates that automated granularity and dynamic integration can be accomplished simply by utilizing the inherent structure of the digital information resources. Such information integration is relevant to library and archival programs that require long-term preservation of authentic digital resources.

  7. Awareness and knowledge on modern biotechnology

    African Journals Online (AJOL)

    Jane

    2011-09-30

    Sep 30, 2011 ... food; MABIC, Malaysian Biotechnology Information Centre. on public ... in Malaysia and provide linkage to several international website on modern ... scholars and university students) possess at least tertiary level of education ...

  8. Effective spatial database support for acquiring spatial information from remote sensing images

    Science.gov (United States)

    Jin, Peiquan; Wan, Shouhong; Yue, Lihua

    2009-12-01

    In this paper, a new approach to maintain spatial information acquiring from remote-sensing images is presented, which is based on Object-Relational DBMS. According to this approach, the detected and recognized results of targets are stored and able to be further accessed in an ORDBMS-based spatial database system, and users can access the spatial information using the standard SQL interface. This approach is different from the traditional ArcSDE-based method, because the spatial information management module is totally integrated into the DBMS and becomes one of the core modules in the DBMS. We focus on three issues, namely the general framework for the ORDBMS-based spatial database system, the definitions of the add-in spatial data types and operators, and the process to develop a spatial Datablade on Informix. The results show that the ORDBMS-based spatial database support for image-based target detecting and recognition is easy and practical to be implemented.

  9. Biotechnological applications of transglutaminases.

    Science.gov (United States)

    Rachel, Natalie M; Pelletier, Joelle N

    2013-10-22

    In nature, transglutaminases catalyze the formation of amide bonds between proteins to form insoluble protein aggregates. This specific function has long been exploited in the food and textile industries as a protein cross-linking agent to alter the texture of meat, wool, and leather. In recent years, biotechnological applications of transglutaminases have come to light in areas ranging from material sciences to medicine. There has also been a substantial effort to further investigate the fundamentals of transglutaminases, as many of their characteristics that remain poorly understood. Those studies also work towards the goal of developing transglutaminases as more efficient catalysts. Progress in this area includes structural information and novel chemical and biological assays. Here, we review recent achievements in this area in order to illustrate the versatility of transglutaminases.

  10. Database, expert systems, information retrieval; Banche dati, sistemi esperti e information retrieval

    Energy Technology Data Exchange (ETDEWEB)

    Fedele, P; Grandoni, G; Mammarella, M C [ENEA - Dipartimento Protezione Ambientale e Salute dell' Uomo, Centro Ricerche Energia, Casaccia (Italy)

    1989-12-15

    The great debate concerning the Italian high-school reform has induced a ferment of activity among the most interested and sensible of people. This was clearly demonstrated by the course 'Innovazione metodologico-didattica e tecnologie informatiche' organized for the staff of the 'lstituto Professionale L. Einaudi' of Lamezia Terme. The course was an interesting opportunity for discussions and interaction between the world of School and computer technology used in the Research field. This three day course included theoretical and practical lessons, showing computer facilities that could be useful for teaching. During the practical lessons some computer tools were presented from the very simple Electronic Sheets to the more complicated information Retrieval on CD-ROM interactive realizations. The main topics will be discussed later. They are: Modelling, Data Base, Integrated Information Systems, Expert Systems, Information Retrieval. (author)

  11. Information flow in the DAMA Project beyond database managers: Information flow managers

    Energy Technology Data Exchange (ETDEWEB)

    Russell, L. [Argonne National Lab., IL (United States); Wolfson, O.; Yu, C. [Illinois Univ., Chicago, IL (United States)

    1996-03-01

    To meet the demands of commercial data traffic on the information highway, a new look at managing data is necessary. One projected activity, sharing of point-of-sale information, is being considered in the Demand Activated Manufacturing Project of the American Textile Partnership project. A scenario is examined in which 100,000 retail outlets communicate over a period of days. They provide the latest estimate of demand for sewn products across a chain of 26,000 suppliers through the use of bill-of-materials explosions at four levels of detail. A new paradign the information flow manager, is developed to handle this situation, including the case where members of the supply chain fail to communicate and go out of business. Techniques for approximation are introduced to keep estimates of demand as current as possible.

  12. 77 FR 47690 - 30-Day Notice of Proposed Information Collection: Civilian Response Corps Database In-Processing...

    Science.gov (United States)

    2012-08-09

    .... Title of Information Collection: Civilian Response Corps Database In-Processing Electronic Form. OMB... DEPARTMENT OF STATE [Public Notice 7976] 30-Day Notice of Proposed Information Collection: Civilian Response Corps Database In-Processing Electronic Form, OMB Control Number 1405-0168, Form DS-4096...

  13. Biotechnology essay competition: biotechnology and sustainable food practices.

    Science.gov (United States)

    Peng, Judy; Schoeb, Helena; Lee, Gina

    2013-06-01

    Biotechnology Journal announces our second biotechnology essay competition with the theme "biotechnology and sustainable food practices", open to all undergraduate students. Copyright © 2013 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

  14. A Spatio-Temporal Building Exposure Database and Information Life-Cycle Management Solution

    Directory of Open Access Journals (Sweden)

    Marc Wieland

    2017-04-01

    Full Text Available With an ever-increasing volume and complexity of data collected from a variety of sources, the efficient management of geospatial information becomes a key topic in disaster risk management. For example, the representation of assets exposed to natural disasters is subjected to changes throughout the different phases of risk management reaching from pre-disaster mitigation to the response after an event and the long-term recovery of affected assets. Spatio-temporal changes need to be integrated into a sound conceptual and technological framework able to deal with data coming from different sources, at varying scales, and changing in space and time. Especially managing the information life-cycle, the integration of heterogeneous information and the distributed versioning and release of geospatial information are important topics that need to become essential parts of modern exposure modelling solutions. The main purpose of this study is to provide a conceptual and technological framework to tackle the requirements implied by disaster risk management for describing exposed assets in space and time. An information life-cycle management solution is proposed, based on a relational spatio-temporal database model coupled with Git and GeoGig repositories for distributed versioning. Two application scenarios focusing on the modelling of residential building stocks are presented to show the capabilities of the implemented solution. A prototype database model is shared on GitHub along with the necessary scenario data.

  15. Re-Framing Biotechnology Regulation.

    Science.gov (United States)

    Peck, Alison

    Biotechnology is about to spill the banks of federal regulation. New genetic engineering techniques like CRISPR-Cas9 promise revolutionary breakthroughs in medicine, agriculture, and public health—but those techniques would not be regulated under the terms of the Coordinated Framework for Regulation of Biotechnology. This revolutionary moment in biotechnology offers an opportunity to correct the flaws in the framework, which was hastily patched together at the advent of the technology. The framework has never captured all relevant technologies, has never satisfied the public that risk is being effectively managed, and has never been accessible to small companies and publicly-funded labs that increasingly are positioned to make radical, life-saving innovations. This Article offers a proposal for new legislation that would reshape biotechnology regulation to better meet these goals. Key reforms include tying regulation to risk rather than technology category; consolidating agency review; capturing distinct regulatory expertise through inter-agency consultations; creating a clearinghouse to help guide applicants and disseminate information; setting up more comprehensive monitoring of environmental effects; and providing federal leadership to fill key data gaps and address socio-economic impacts.

  16. Systems biology and biotechnology of Streptomyces species for the production of secondary metabolites

    DEFF Research Database (Denmark)

    Hwang, Kyu-Sang; Kim, Hyun Uk; Charusanti, Pep

    2014-01-01

    Streptomyces species continue to attract attention as a source of novel medicinal compounds. Despite a long history of studies on these microorganisms, they still have many biochemical mysteries to be elucidated. Investigations of novel secondary metabolites and their biosynthetic gene clusters...... collected in the form of databases and knowledgebases, providing predictive information and enabling one to explore experimentally unrecognized biological spaces of secondary metabolism. Herein, we review recent trends in the systems biology and biotechnology of Streptomyces species....

  17. Information Management in Creative Engineering Design and Capabilities of Database Transactions

    DEFF Research Database (Denmark)

    Jacobsen, Kim; Eastman, C. A.; Jeng, T. S.

    1997-01-01

    This paper examines the information management requirements and sets forth the general criteria for collaboration and concurrency control in creative engineering design. Our work attempts to recognize the full range of concurrency, collaboration and complex transactions structure now practiced...... in manual and semi-automated design and the range of capabilities needed as the demands for enhanced but flexible electronic information management unfolds.The objective of this paper is to identify new issues that may advance the use of databases to support creative engineering design. We start...... with a generalized description of the structure of design tasks and how information management in design is dealt with today. After this review, we identify extensions to current information management capabilities that have been realized and/or proposed to support/augment what designers can do now. Given...

  18. Frontiers in biomedical engineering and biotechnology.

    Science.gov (United States)

    Liu, Feng; Goodarzi, Ali; Wang, Haifeng; Stasiak, Joanna; Sun, Jianbo; Zhou, Yu

    2014-01-01

    The 2nd International Conference on Biomedical Engineering and Biotechnology (iCBEB 2013), held in Wuhan on 11–13 October 2013, is an annual conference that aims at providing an opportunity for international and national researchers and practitioners to present the most recent advances and future challenges in the fields of Biomedical Information, Biomedical Engineering and Biotechnology. The papers published by this issue are selected from this conference, which witnesses the frontier in the field of Biomedical Engineering and Biotechnology, which particularly has helped improving the level of clinical diagnosis in medical work.

  19. The utility of imputed matched sets. Analyzing probabilistically linked databases in a low information setting.

    Science.gov (United States)

    Thomas, A M; Cook, L J; Dean, J M; Olson, L M

    2014-01-01

    To compare results from high probability matched sets versus imputed matched sets across differing levels of linkage information. A series of linkages with varying amounts of available information were performed on two simulated datasets derived from multiyear motor vehicle crash (MVC) and hospital databases, where true matches were known. Distributions of high probability and imputed matched sets were compared against the true match population for occupant age, MVC county, and MVC hour. Regression models were fit to simulated log hospital charges and hospitalization status. High probability and imputed matched sets were not significantly different from occupant age, MVC county, and MVC hour in high information settings (p > 0.999). In low information settings, high probability matched sets were significantly different from occupant age and MVC county (p sets were not (p > 0.493). High information settings saw no significant differences in inference of simulated log hospital charges and hospitalization status between the two methods. High probability and imputed matched sets were significantly different from the outcomes in low information settings; however, imputed matched sets were more robust. The level of information available to a linkage is an important consideration. High probability matched sets are suitable for high to moderate information settings and for situations involving case-specific analysis. Conversely, imputed matched sets are preferable for low information settings when conducting population-based analyses.

  20. Validation and extraction of molecular-geometry information from small-molecule databases.

    Science.gov (United States)

    Long, Fei; Nicholls, Robert A; Emsley, Paul; Graǽulis, Saulius; Merkys, Andrius; Vaitkus, Antanas; Murshudov, Garib N

    2017-02-01

    A freely available small-molecule structure database, the Crystallography Open Database (COD), is used for the extraction of molecular-geometry information on small-molecule compounds. The results are used for the generation of new ligand descriptions, which are subsequently used by macromolecular model-building and structure-refinement software. To increase the reliability of the derived data, and therefore the new ligand descriptions, the entries from this database were subjected to very strict validation. The selection criteria made sure that the crystal structures used to derive atom types, bond and angle classes are of sufficiently high quality. Any suspicious entries at a crystal or molecular level were removed from further consideration. The selection criteria included (i) the resolution of the data used for refinement (entries solved at 0.84 Å resolution or higher) and (ii) the structure-solution method (structures must be from a single-crystal experiment and all atoms of generated molecules must have full occupancies), as well as basic sanity checks such as (iii) consistency between the valences and the number of connections between atoms, (iv) acceptable bond-length deviations from the expected values and (v) detection of atomic collisions. The derived atom types and bond classes were then validated using high-order moment-based statistical techniques. The results of the statistical analyses were fed back to fine-tune the atom typing. The developed procedure was repeated four times, resulting in fine-grained atom typing, bond and angle classes. The procedure will be repeated in the future as and when new entries are deposited in the COD. The whole procedure can also be applied to any source of small-molecule structures, including the Cambridge Structural Database and the ZINC database.

  1. Assessing the quality of life history information in publicly available databases.

    Science.gov (United States)

    Thorson, James T; Cope, Jason M; Patrick, Wesley S

    2014-01-01

    Single-species life history parameters are central to ecological research and management, including the fields of macro-ecology, fisheries science, and ecosystem modeling. However, there has been little independent evaluation of the precision and accuracy of the life history values in global and publicly available databases. We therefore develop a novel method based on a Bayesian errors-in-variables model that compares database entries with estimates from local experts, and we illustrate this process by assessing the accuracy and precision of entries in FishBase, one of the largest and oldest life history databases. This model distinguishes biases among seven life history parameters, two types of information available in FishBase (i.e., published values and those estimated from other parameters), and two taxa (i.e., bony and cartilaginous fishes) relative to values from regional experts in the United States, while accounting for additional variance caused by sex- and region-specific life history traits. For published values in FishBase, the model identifies a small positive bias in natural mortality and negative bias in maximum age, perhaps caused by unacknowledged mortality caused by fishing. For life history values calculated by FishBase, the model identified large and inconsistent biases. The model also demonstrates greatest precision for body size parameters, decreased precision for values derived from geographically distant populations, and greatest between-sex differences in age at maturity. We recommend that our bias and precision estimates be used in future errors-in-variables models as a prior on measurement errors. This approach is broadly applicable to global databases of life history traits and, if used, will encourage further development and improvements in these databases.

  2. Dynamic Externalities, Universities and Social Capital Formation in the EU Biotechnology Industry

    Directory of Open Access Journals (Sweden)

    Malgorzata RUNIEWICZ-WARDYN

    2017-03-01

    Full Text Available The paper investigates the role of dynamic externalities, university-industry linkages and role of social networking in the biotechnology industry in the European Union (EU. Universities act as platforms for local knowledge spillovers and university-industry cluster development in the biotechnology field. The R&D activities at universities contribute to successful business innovations. However, the relationship between the universities and the local innovation capabilities is much more complex and therefore requires more in-depth analysis. The following study derives from the knowledge of the new economic geography, endogenous growth theory, biotechnology, as well as theories of social capital and social networks. The quantitative research elaborates contemporary literature and databases to find channels of interdependence between local university-based knowledge flows, social capital, and biotechnology cluster performance. The results of the study show that the biotechnology industry relies very much on university-business R&D partnerships and research mobility (e.g. pharmaceutical firms that performed basic research in close cooperation with academia produced more patents. In addition, social networking and informal contacts seem to be a more important for the diffusion of knowledge, especially at the beginning of R&D process, as they allow for building credibility between potential partners.

  3. Industrial College of the Armed Forces Industry Studies 2003: Biotechnology

    National Research Council Canada - National Science Library

    Aichouche, Abdelaziz

    2003-01-01

    Biotechnology is a discipline that integrates biology, chemistry, physiology, information technology, engineering, and nanotechnology with the potential to revolutionize every aspect of modern life...

  4. Evolution of grid-wide access to database resident information in ATLAS using Frontier

    CERN Document Server

    Barberis, D; The ATLAS collaboration; de Stefano, J; Dewhurst, A L; Dykstra, D; Front, D

    2012-01-01

    The ATLAS experiment deployed Frontier technology world-wide during the the initial year of LHC collision data taking to enable user analysis jobs running on the World-wide LHC Computing Grid to access database resident data. Since that time, the deployment model has evolved to optimize resources, improve performance, and streamline maintenance of Frontier and related infrastructure. In this presentation we focus on the specific changes in the deployment and improvements undertaken such as the optimization of cache and launchpad location, the use of RPMs for more uniform deployment of underlying Frontier related components, improvements in monitoring, optimization of fail-over, and an increasing use of a centrally managed database containing site specific information (for configuration of services and monitoring). In addition, analysis of Frontier logs has allowed us a deeper understanding of problematic queries and understanding of use cases. Use of the system has grown beyond just user analysis and subsyste...

  5. FCDD: A Database for Fruit Crops Diseases.

    Science.gov (United States)

    Chauhan, Rupal; Jasrai, Yogesh; Pandya, Himanshu; Chaudhari, Suman; Samota, Chand Mal

    2014-01-01

    Fruit Crops Diseases Database (FCDD) requires a number of biotechnology and bioinformatics tools. The FCDD is a unique bioinformatics resource that compiles information about 162 details on fruit crops diseases, diseases type, its causal organism, images, symptoms and their control. The FCDD contains 171 phytochemicals from 25 fruits, their 2D images and their 20 possible sequences. This information has been manually extracted and manually verified from numerous sources, including other electronic databases, textbooks and scientific journals. FCDD is fully searchable and supports extensive text search. The main focus of the FCDD is on providing possible information of fruit crops diseases, which will help in discovery of potential drugs from one of the common bioresource-fruits. The database was developed using MySQL. The database interface is developed in PHP, HTML and JAVA. FCDD is freely available. http://www.fruitcropsdd.com/

  6. Biotechnology : A Dutch perspective

    NARCIS (Netherlands)

    Van Apeldoorn, J.H.F.

    1981-01-01

    Biotechnology: a Dutch Perspective assesses the future potential of biotechnology in the Netherlands. It has been published in English because it is felt that the Dutch case could be of relevance to other industrialised nations. Although the report is aimed primarily at policy planners and decision

  7. Biotechnology Industry, 2006

    Science.gov (United States)

    2006-01-01

    for commercial or other purposes. Because it is a process resting on the understanding of genetics, proteomics , and life science, biotechnology has...Luhnow & Samor, 2006). Novel biotechnologies could bring down the costs of making ethanol. Iogen Corporation has genetically modified a fungus to

  8. Healthcare biotechnology in India

    OpenAIRE

    Srivastava, L. M.

    2005-01-01

    Biotechnology in India has made great progress in the development of infrastructure, manpower, research and development and manufacturing of biological reagents, biodiagnostics, biotherapeutics, therapeutic and, prophylactic vaccines and biodevices. Many of these indigenous biological reagents, biodiagnostics, therapeutic and prophylactic vaccines and biodevices have been commercialized. Commercially when biotechnology revenue has reached $25 billions in the U.S. alone in 2000 excluding the r...

  9. Biotechnology and Agriculture.

    Science.gov (United States)

    Kenney, Martin

    Even at this early date in the application of biotechnology to agriculture, it is clear that agriculture may provide the largest market for new or less expensive biotechnologically manufactured products. The chemical and pharmaceutical industries that hold important positions in agricultural inputs are consolidating their positions by purchasing…

  10. Biotechnology in China

    National Research Council Canada - National Science Library

    Hamer, Dean H; Kung, Shain-dow

    1989-01-01

    ... and Shain-dow Kung Center for Agricultural Biotechnology Maryland Biotechnology Institute Department of Botany University of Maryland College Park, Maryland Committee on Scholarly Communication with the People's Republic of China National Academy of Sciences National Academy Press Washington, DC 1989 i Copyrightthe cannot be not from bo...

  11. National information network and database system of hazardous waste management in China

    Energy Technology Data Exchange (ETDEWEB)

    Ma Hongchang [National Environmental Protection Agency, Beijing (China)

    1996-12-31

    Industries in China generate large volumes of hazardous waste, which makes it essential for the nation to pay more attention to hazardous waste management. National laws and regulations, waste surveys, and manifest tracking and permission systems have been initiated. Some centralized hazardous waste disposal facilities are under construction. China`s National Environmental Protection Agency (NEPA) has also obtained valuable information on hazardous waste management from developed countries. To effectively share this information with local environmental protection bureaus, NEPA developed a national information network and database system for hazardous waste management. This information network will have such functions as information collection, inquiry, and connection. The long-term objective is to establish and develop a national and local hazardous waste management information network. This network will significantly help decision makers and researchers because it will be easy to obtain information (e.g., experiences of developed countries in hazardous waste management) to enhance hazardous waste management in China. The information network consists of five parts: technology consulting, import-export management, regulation inquiry, waste survey, and literature inquiry.

  12. The Information Seeking Interface with Spatial Icons for the Children Digital-learning Database

    Directory of Open Access Journals (Sweden)

    吳可久、林佳蓉、陳泓均、柯皓仁 Ko-Chiu Wu,Chia-Jung Lin,Hung-Chun Chen,Hao-Ren Ke

    2014-04-01

    Full Text Available In this age of information technology, children must develop the ability to search digital databases.However, the information-seeking behavior and cognitive abilities associated with language and images differ substantially between children and adults. Therefore there is an urgent need foran information-searching interface customized for children. Drawing on the design of computer games, we created a three-dimensional (3D human-computer interface (HCI. Children’s experience playing computer games can therefore inform way-finding and information-seeking behavior inthis spatially-oriented interface. Three types of HCI were developed: a 2D graphic hyperlink (GH,a 3D extended survey (ES, and a 3D extended route (ER. These were tested for efficiency, effectiveness, and time of operation by one-way analysis of variance. Our results indicated that children behave differently on the various interfaces. The proposed HCI is a helpful tool offering children a knowledge map that enables them to search for the information they need. Our results demonstrate that information visualization theory and concept association are topics worthy offurther study in the development of a child-oriented information-seeking interface. pp. 51-65

  13. Proteomics: a biotechnology tool for crop improvement

    OpenAIRE

    Eldakak, Moustafa; Milad, Sanaa I. M.; Nawar, Ali I.; Rohila, Jai S.

    2013-01-01

    A sharp decline in the availability of arable land and sufficient supply of irrigation water along with a continuous steep increase in food demands have exerted a pressure on farmers to produce more with fewer resources. A viable solution to release this pressure is to speed up the plant breeding process by employing biotechnology in breeding programs. The majority of biotechnological applications rely on information generated from various -omic technologies. The latest outstanding improve...

  14. Incident and Trafficking Database: New Systems for Reporting and Accessing State Information

    International Nuclear Information System (INIS)

    Dimitrovski, D.; Kittley, S.

    2015-01-01

    The IAEA's Incident and Trafficking Database (ITDB) is the Agency's authoritative source for information on incidents in which nuclear and other radioactive material is out of national regulatory control. It was established in 1995 and, as of June 2014, 126 States participate in the ITDB programme. Currently, the database contains over 2500 confirmed incidents, out of which 21% involve nuclear material, 62% radioactive source and 17% radioactively contaminated material. In recent years, the system for States to report incidents to the ITDB has been evolving — moving from fax-based to secure email and most recently to secure on-line reporting. A Beta version of the on-line system was rolled out this June, offering a simple, yet secure, communication channel for member states to provide information. In addition the system serves as a central hub for information related to official communication of the IAEA with Member States so some communication that is traditionally shared by e-mail does not get lost when ITDB counterparts change. In addition the new reporting system incorporates optional features that allow multiple Member State users to collaboratively contribute toward an INF. States are also being given secure on-line access to a streamlined version of the ITDB. This improves States' capabilities to retrieve and analyze information for their own purposes. In addition, on-line access to ITDB statistical information on incidents is available to States through an ITDB Dashboard. The dashboard contains aggregate information on number and types of incidents, material involved, as well some other statistics related to the ITDB that is typically provided in the ITDB Quarterly reports. (author)

  15. Intelligent information database of the thermal-hydraulic characteristics for a future marine water reactor

    International Nuclear Information System (INIS)

    Inasaka, Fujio; Nariai, Hideki

    2000-01-01

    At the Ship Research Institute, a series of the experimental studies on the thermal-hydraulic characteristics of an integrated type marine water reactor has been conducted. This current study aims at developing an intelligent information database program with the thermal-hydraulic characteristics of a future marine water reactor on the basis of the valuably experimental knowledge, which was obtained from the above-mentioned studies. In this paper, the experimental knowledge with the flow boiling of a once-through steam generator and the natural circulation of primary water under a ship rolling motion was converted into an intelligent information database program. The program was created as a Windows application using the Visual Basic. Main functions of the program are as follows: (1) steady state flow boiling analysis and determination of stability for any helical-coil type once-through steam generator design, (2) reference and graphic display of the experimental data, (3) reference of the information such as analysis method and experimental apparatus. The program will be useful for the design of not only the future integrated type marine water reactor but also the small sized reactor with helical-coil type steam generator. (author)

  16. Adding Hierarchical Objects to Relational Database General-Purpose XML-Based Information Managements

    Science.gov (United States)

    Lin, Shu-Chun; Knight, Chris; La, Tracy; Maluf, David; Bell, David; Tran, Khai Peter; Gawdiak, Yuri

    2006-01-01

    NETMARK is a flexible, high-throughput software system for managing, storing, and rapid searching of unstructured and semi-structured documents. NETMARK transforms such documents from their original highly complex, constantly changing, heterogeneous data formats into well-structured, common data formats in using Hypertext Markup Language (HTML) and/or Extensible Markup Language (XML). The software implements an object-relational database system that combines the best practices of the relational model utilizing Structured Query Language (SQL) with those of the object-oriented, semantic database model for creating complex data. In particular, NETMARK takes advantage of the Oracle 8i object-relational database model using physical-address data types for very efficient keyword searches of records across both context and content. NETMARK also supports multiple international standards such as WEBDAV for drag-and-drop file management and SOAP for integrated information management using Web services. The document-organization and -searching capabilities afforded by NETMARK are likely to make this software attractive for use in disciplines as diverse as science, auditing, and law enforcement.

  17. YAC contig information - RGP physicalmap | LSDB Archive [Life Science Database Archive metadata

    Lifescience Database Archive (English)

    Full Text Available 8908/lsdba.nbdc00318-06-001 Description of data contents YAC contigs on the rice chromosomes Data file File name: rgp_physical...map_yac_contigs.zip File URL: ftp://ftp.biosciencedbc.jp/archive/rgp-physicalmap/LATEST/rgp_physical...sciencedbc.jp/togodb/view/rgp_physicalmap_yac_contigs#en Data acquisition method The range including YAC con...m Description Chrom. No. Chromosome number Region Region number Physical map image The file name of rice physical...n Download License Update History of This Database Site Policy | Contact Us YAC contig information - RGP physicalmap | LSDB Archive ...

  18. National Levee Database, series information for the current inventory of the Nation's levees.

    Data.gov (United States)

    Federal Geographic Data Committee — The National Levee Database is authoritative database that describes the location and condition of the Nation’s levees. The database contains 21 feature classes...

  19. A-state- of-the-art report on construction of a bibliographic information database for the ETDE

    International Nuclear Information System (INIS)

    Oh, Jeong Hoon; Kim, Tae Whan; Yi, Ji Ho; Choi, Kwang; Chun, Young Chun; Yoo, Jae Bok; Yoo, An Na

    2001-11-01

    This report describes A State-of-the-Art Report on Construction of a Bibliographic Information Database for the ETDE(Energy Technology Data Excahange). In the energy technology, the data was selected materials, taken necessary information from it. The analyized materials was inputted according to input rule of ETDE format and verified input software (WinFIBRE). With the help of the National Energy information Consortium composed of 8 organizations, domestic information have been gathered and submitted to ETDE/OA for the exchange of bibliographic information. ETDE database is expected to help energy technology information users for their R and D and improvement of energy efficiency through ETIS system

  20. New perspectives in toxicological information management, and the role of ISSTOX databases in assessing chemical mutagenicity and carcinogenicity.

    Science.gov (United States)

    Benigni, Romualdo; Battistelli, Chiara Laura; Bossa, Cecilia; Tcheremenskaia, Olga; Crettaz, Pierre

    2013-07-01

    Currently, the public has access to a variety of databases containing mutagenicity and carcinogenicity data. These resources are crucial for the toxicologists and regulators involved in the risk assessment of chemicals, which necessitates access to all the relevant literature, and the capability to search across toxicity databases using both biological and chemical criteria. Towards the larger goal of screening chemicals for a wide range of toxicity end points of potential interest, publicly available resources across a large spectrum of biological and chemical data space must be effectively harnessed with current and evolving information technologies (i.e. systematised, integrated and mined), if long-term screening and prediction objectives are to be achieved. A key to rapid progress in the field of chemical toxicity databases is that of combining information technology with the chemical structure as identifier of the molecules. This permits an enormous range of operations (e.g. retrieving chemicals or chemical classes, describing the content of databases, finding similar chemicals, crossing biological and chemical interrogations, etc.) that other more classical databases cannot allow. This article describes the progress in the technology of toxicity databases, including the concepts of Chemical Relational Database and Toxicological Standardized Controlled Vocabularies (Ontology). Then it describes the ISSTOX cluster of toxicological databases at the Istituto Superiore di Sanitá. It consists of freely available databases characterised by the use of modern information technologies and by curation of the quality of the biological data. Finally, this article provides examples of analyses and results made possible by ISSTOX.

  1. A database paradigm for the management of DICOM-RT structure sets using a geographic information system

    International Nuclear Information System (INIS)

    Shao, Weber; Kupelian, Patrick A; Wang, Jason; Low, Daniel A; Ruan, Dan

    2014-01-01

    We devise a paradigm for representing the DICOM-RT structure sets in a database management system, in such way that secondary calculations of geometric information can be performed quickly from the existing contour definitions. The implementation of this paradigm is achieved using the PostgreSQL database system and the PostGIS extension, a geographic information system commonly used for encoding geographical map data. The proposed paradigm eliminates the overhead of retrieving large data records from the database, as well as the need to implement various numerical and data parsing routines, when additional information related to the geometry of the anatomy is desired.

  2. A database paradigm for the management of DICOM-RT structure sets using a geographic information system

    Science.gov (United States)

    Shao, Weber; Kupelian, Patrick A.; Wang, Jason; Low, Daniel A.; Ruan, Dan

    2014-03-01

    We devise a paradigm for representing the DICOM-RT structure sets in a database management system, in such way that secondary calculations of geometric information can be performed quickly from the existing contour definitions. The implementation of this paradigm is achieved using the PostgreSQL database system and the PostGIS extension, a geographic information system commonly used for encoding geographical map data. The proposed paradigm eliminates the overhead of retrieving large data records from the database, as well as the need to implement various numerical and data parsing routines, when additional information related to the geometry of the anatomy is desired.

  3. Healthcare biotechnology in India.

    Science.gov (United States)

    Srivastava, L M

    2005-01-01

    Biotechnology in India has made great progress in the development of infrastructure, manpower, research and development and manufacturing of biological reagents, biodiagnostics, biotherapeutics, therapeutic and, prophylactic vaccines and biodevices. Many of these indigenous biological reagents, biodiagnostics, therapeutic and prophylactic vaccines and biodevices have been commercialized. Commercially when biotechnology revenue has reached $25 billions in the U.S. alone in 2000 excluding the revenues of biotech companies that were acquired by pharmaceutical companies, India has yet to register a measurable success. The conservative nature and craze of the Indian Industry for marketing imported biotechnology products, lack of Government support, almost non-existing national healthcare system and lack of trained managers for marketing biological and new products seem to be the important factors responsible for poor economic development of biotechnology in India. With the liberalization of Indian economy, more and more imported biotechnology products will enter into the Indian market. The conditions of internal development of biotechnology are not likely to improve in the near future and it is destined to grow only very slowly. Even today biotechnology in India may be called to be in its infancy.

  4. The Net Enabled Waste Management Database as an international source of radioactive waste management information

    International Nuclear Information System (INIS)

    Csullog, G.W.; Friedrich, V.; Miaw, S.T.W.; Tonkay, D.; Petoe, A.

    2002-01-01

    The IAEA's Net Enabled Waste Management Database (NEWMDB) is an integral part of the IAEA's policies and strategy related to the collection and dissemination of information, both internal to the IAEA in support of its activities and external to the IAEA (publicly available). The paper highlights the NEWMDB's role in relation to the routine reporting of status and trends in radioactive waste management, in assessing the development and implementation of national systems for radioactive waste management, in support of a newly developed indicator of sustainable development for radioactive waste management, in support of reporting requirements for the Joint Convention on the Safety of Spent Fuel Management and on the Safety of Radioactive Waste Management, in support of IAEA activities related to the harmonization of waste management information at the national and international levels and in relation to the management of spent/disused sealed radioactive sources. (author)

  5. Interface of nuclear and biotechnologies

    International Nuclear Information System (INIS)

    Castro Diaz-Balart, F.

    2005-01-01

    Addressing nuclear and biotechnologies in the International Year of Physics should begin by highlighting the important role that this science has played in the development of both branches of science and technologies. The first as a direct consequence of the Theory of Relativity, the further was considerably influenced by Schroedinger's remarks that there must be a code of some kind that allowed molecules in cells to carry information, making a connection between genes and proteins. Both, like any highly technical endeavor, have also in common that the use of technologies demands a vast accumulation of knowledge, i.e. volumes of scientific research, engineering analysis, strict regulatory controls and a huge amount of information combined with a complex assortment of people with the required educational background, expertise and skills to master it. This presentation briefly explores the ways in which nuclear technology has been used in the last decades of the 20th century in the field of biomedicine applications, which includes the use of radiation to obtain accurate images as well as in diagnosis and therapy. The paper looks at the present prospects of some nuclear methods and instrumentation in the so-called Red biotechnology and its genetically engineered therapeutic agents and diagnostic tests as well as some related perspectives in the field of bioinformatics. As an example of biotechnology being successfully applied to health problems in developing countries the presentation gives an outlook of relevant Cuban achievements in this field. (author)

  6. Biotechnology for energy

    International Nuclear Information System (INIS)

    Malik, K.A.; Naqvi, S.H.M.

    1991-01-01

    The present volume comprises paper presented and discussed in the symposium. The main purpose of this symposium was to collect researchers in the area of bioconversion of biomass into biofuels, petroleum biotechnology and biohydrometallurgy. This book has been divided into four main sections which includes molecular biology of biomass conversion, microbial conversion of biomass, petroleum biotechnology and biohydrometallurgy. It is becoming clear that biotechnology play a role in production and conservation of energy and can contribute to the overall energy situation. (A.B.)

  7. National Carbon Sequestration Database and Geographic Information System (NatCarb)

    Energy Technology Data Exchange (ETDEWEB)

    Kenneth Nelson; Timothy Carr

    2009-03-31

    This annual and final report describes the results of the multi-year project entitled 'NATional CARBon Sequestration Database and Geographic Information System (NatCarb)' (http://www.natcarb.org). The original project assembled a consortium of five states (Indiana, Illinois, Kansas, Kentucky and Ohio) in the midcontinent of the United States (MIDCARB) to construct an online distributed Relational Database Management System (RDBMS) and Geographic Information System (GIS) covering aspects of carbon dioxide (CO{sub 2}) geologic sequestration. The NatCarb system built on the technology developed in the initial MIDCARB effort. The NatCarb project linked the GIS information of the Regional Carbon Sequestration Partnerships (RCSPs) into a coordinated regional database system consisting of datasets useful to industry, regulators and the public. The project includes access to national databases and GIS layers maintained by the NatCarb group (e.g., brine geochemistry) and publicly accessible servers (e.g., USGS, and Geography Network) into a single system where data are maintained and enhanced at the local level, but are accessed and assembled through a single Web portal to facilitate query, assembly, analysis and display. This project improves the flow of data across servers and increases the amount and quality of available digital data. The purpose of NatCarb is to provide a national view of the carbon capture and storage potential in the U.S. and Canada. The digital spatial database allows users to estimate the amount of CO{sub 2} emitted by sources (such as power plants, refineries and other fossil-fuel-consuming industries) in relation to geologic formations that can provide safe, secure storage sites over long periods of time. The NatCarb project worked to provide all stakeholders with improved online tools for the display and analysis of CO{sub 2} carbon capture and storage data through a single website portal (http://www.natcarb.org/). While the external

  8. Construction of a bibliographic information database for the Nuclear Science and Engineering (IX)

    Energy Technology Data Exchange (ETDEWEB)

    Kim, Tae Whan; Oh, Jeong Hun; Choi, Kwang; Keum, Jong Yong [Korea Atomic Energy Research Institute, Taejon (Korea)

    1999-12-01

    The major goal of this project is to construct a database in nuclear science and engineering information materials, support the R and D activities of users in this field, finally to support KRISTAL(Korea Research Information for Science and Technology Access Line)'s DB through the KREONet(Korea Research Environment Open Network), as one of the five national information networks. The contents of this project are as follows: 1) Materials selection and collection, 2) Indexing and abstract preparation, 3) Data input and transmission, and 4) document delivery service. In this seventh year, 40,000 records, as total of inputted data, are added to the existing SATURN DB. These records are covered with the articles of nuclear-related core journals, proceedings, seminars, and research reports, etc. And using the Web, this project was important for users to get their needed information itself and to receive the materials of online requested information. And then it will give the chance users not only to promote the the effectiveness of R and D activities, but also to obviate the duplicated research works. 1 fig., 1 tab. (Author)

  9. Construction of a bibliographic information database for the nuclear science and engineering (VIII)

    Energy Technology Data Exchange (ETDEWEB)

    Kim, Tae Whan; Kim, Soon Ja; Kim, Young Min; Oh, Jeong Hun; Choi, Kwang [Korea Atomic Energy Research Institute, Taejon (Korea)

    1998-12-01

    The major goal of this project is to construct a database in nuclear science and engineering information materials, support the R and D activities of users in this field, finally to support KRISTAL(Korea Research Information for Science ad Technology Access Line)'s BD through the KREONet (Korea Research Environment Open Network), as one of the five national information networks. The contents of this project are as follows : 1) Materials selection and collection, 2) Indexing and abstract preparation, 3) Data input and transmission, and 4) document delivery service. In this seventh year, 35,000 record as total of inputted data, are added to the existing SATURN DB using the input system. These records are covered with the articles of nuclear-related core journals, proceedings, seminars, and research reports, etc. And using the Web, this project was important for users to get their needed information itself and to receive the materials of online requested information. And then it will give the chance users not only to promote the effectiveness of R and D activities, but also to obviate the duplicated research works. 1 tab. (Author)

  10. Construction of a bibliographic information database for the nuclear science and engineering

    Energy Technology Data Exchange (ETDEWEB)

    Kim, Tae Whan; Kim, Soon Ja; Choi, Kwang [Korea Atomic Energy Reasech Institute, Taejon (Korea)

    1997-12-01

    The major goal of this project is to construct a database in nuclear science and engineering information materials, support the R and D activities of users in this field, finally to support KRISTAL(Korea Research Information for Science and Technology Access Line)'s DB through the KREONet(Korea Research Environment Open Network), as one of the five national information networks. The contents of this project are as follows: (1) Materials selection and collection, (2) Indexing and abstract preparation, (3) Data input and transmission, and (4) document delivery service. In this seventh year, 45000 records, as total of inputted data, are added to the existing SATURN DB. These records are covered with the articles of nuclear-related core journals, proceedings, seminars, and research reports, etc. And using the Web, this project was important for users to get their needed information itself and to receive the materials of online requested information. And then it will give the chance users not only to promote the effectiveness of R and D activities, but also to obviate the duplicated research works. (author). 1 fig., 1 tab.

  11. Construction of a bibliographic information database for the nuclear science and engineering (X)

    Energy Technology Data Exchange (ETDEWEB)

    Kim, Tae Whan; Lee, Ji Ho; Oh, Jeong Hun; Choi, Kwang; Chun, Young Chun; Yoo, Jae Bok; Yu, Anna [Korea Atomic Energy Research Institute, Taejeon (Korea)

    2000-12-01

    The major goal of this project is to construct a database in nuclear science and engineering information materials, support the R and D activities of users in this field, finally to support KRISTAL(Korea Research Information for Science and Technology Access Line)'s DB through the KREONet(Korea Research Environment Open Network), as one of the five national information networks.The contents of this project are as follows: 1) Materials selection and collection, 2) Indexing and abstract preparation, 3) Data input and transmission, and 4) document delivery service. In this Tenth year, 30,500 records ,as total of inputted data, are added to the existing SATURN DB. These records are covered with the articles of nuclear-related core journals, proceedings, seminars, and research reports, etc. And using the Web, this project was important for users to get their needed information itself and to receive the materials of online requested information . And then it will give the chance users not only to promote the effectiveness of R and D activities, but also to obviate the duplicated research works. 2 tabs. (Author)

  12. Developing an Approach to Prioritize River Restoration using Data Extracted from Flood Risk Information System Databases.

    Science.gov (United States)

    Vimal, S.; Tarboton, D. G.; Band, L. E.; Duncan, J. M.; Lovette, J. P.; Corzo, G.; Miles, B.

    2015-12-01

    Prioritizing river restoration requires information on river geometry. In many states in the US detailed river geometry has been collected for floodplain mapping and is available in Flood Risk Information Systems (FRIS). In particular, North Carolina has, for its 100 Counties, developed a database of numerous HEC-RAS models which are available through its Flood Risk Information System (FRIS). These models that include over 260 variables were developed and updated by numerous contractors. They contain detailed surveyed or LiDAR derived cross-sections and modeled flood extents for different extreme event return periods. In this work, over 4700 HEC-RAS models' data was integrated and upscaled to utilize detailed cross-section information and 100-year modelled flood extent information to enable river restoration prioritization for the entire state of North Carolina. We developed procedures to extract geomorphic properties such as entrenchment ratio, incision ratio, etc. from these models. Entrenchment ratio quantifies the vertical containment of rivers and thereby their vulnerability to flooding and incision ratio quantifies the depth per unit width. A map of entrenchment ratio for the whole state was derived by linking these model results to a geodatabase. A ranking of highly entrenched counties enabling prioritization for flood allowance and mitigation was obtained. The results were shared through HydroShare and web maps developed for their visualization using Google Maps Engine API.

  13. Traditional Chinese Biotechnology

    Science.gov (United States)

    Xu, Yan; Wang, Dong; Fan, Wen Lai; Mu, Xiao Qing; Chen, Jian

    The earliest industrial biotechnology originated in ancient China and developed into a vibrant industry in traditional Chinese liquor, rice wine, soy sauce, and vinegar. It is now a significant component of the Chinese economy valued annually at about 150 billion RMB. Although the production methods had existed and remained basically unchanged for centuries, modern developments in biotechnology and related fields in the last decades have greatly impacted on these industries and led to numerous technological innovations. In this chapter, the main biochemical processes and related technological innovations in traditional Chinese biotechnology are illustrated with recent advances in functional microbiology, microbial ecology, solid-state fermentation, enzymology, chemistry of impact flavor compounds, and improvements made to relevant traditional industrial facilities. Recent biotechnological advances in making Chinese liquor, rice wine, soy sauce, and vinegar are reviewed.

  14. Biotechnology of marine fungi

    Digital Repository Service at National Institute of Oceanography (India)

    Damare, S.R.; Singh, P.; Raghukumar, S.

    Filamentous fungi are the most widely used eukaryotes in industrial and pharmaceutical applications. Their biotechnological uses include the production of enzymes, vitamins, polysaccharides, pigments, lipids and others. Marine fungi are a still...

  15. Biotechnology for renewable chemicals

    DEFF Research Database (Denmark)

    Borodina, Irina; Kildegaard, Kanchana Rueksomtawin; Jensen, Niels Bjerg

    2014-01-01

    The majority of the industrial organic chemicals are derived from fossil sources. With the oil and gas resources becoming limiting, biotechnology offers a sustainable alternative for production ofchemicals from renewable feedstocks. Yeast is an attractive cell factory forsustainable production...

  16. Nigerian Journal of Biotechnology

    African Journals Online (AJOL)

    Nigerian Journal of Biotechnology is a publisher of multidisciplinary ... Assessment of microalgae-influenced biodeterioration of concrete structures · EMAIL FREE ... A study on 3-mercaptopyruvate sulphurtransferase (3-MST) produced under ...

  17. Calorimeters for biotechnology

    International Nuclear Information System (INIS)

    Russell, Donald J.; Hansen, Lee D.

    2006-01-01

    The isothermal and temperature scanning calorimeters manufactured by Calorimetry Sciences Corporation are briefly described. Applications of calorimetry to determine thermodynamics and kinetics of reactions of interest in biotechnology are described with illustrative examples

  18. Biotechnological research in Europe

    Energy Technology Data Exchange (ETDEWEB)

    Rehm, H J

    1982-01-01

    The current research possibilities in the expanding field of biotechnology in Europe are very briefly described. Remarks on research and development are limited to six topics: fermented food products; biomass production; product formation; bioreactors; waste-water treatment, environmental processes and methane formation; central research institutions. It is summarised that increased efforts at co-operation on all levels are vital for an improved development in the field of biotechnology throughout Europe.

  19. BIOTECHNOLOGY : AN OVERVIEW

    Directory of Open Access Journals (Sweden)

    John I. Bruce

    2012-09-01

    Full Text Available Biotechnology as a science includes various aspects of the management and manipulation of biological systems. Recent advances in immunology, molecular biology, cell culture and other associated areas provide an opportunity for scientists to move biology out of the laboratory and into the realms of society. This has many implications which mankind on a whole may not be prepared to cope with at this time. This new capability has been referred to as "Biotechnology". Biotechnology has also been defined as "the integrated use of biochemistry, microbiology, and chemical engineering in order to achieve the capacities of microbes and culture cells". Genetic engineering which includes gene splicing and recombinant DNA-cloning is an example of a recent offshoot of biotechnology. Because of the advent of biotechnology, one can now think of the prospect of engineering tomorrows vaccines. In the past, vaccine development has been laborious and in many instances an unrewarding task. After years of effort only a handful of safe, effective vaccines have emerged. In the biotechnology arena, new methodologies and strategies for immunizing humans and domestic animals against infectious diseases are providing new hope for discovering successful vaccines. While most of the effort in the past has focused on viral vaccine development, attention is now being directed towards vaccines for protection against parasitic diseases. Currently, considerable effort is being made to develop vaccines for malaria, coccidiosis (in fowl, cholera, malaria, schistosomiasis and trypanosomiasis among others.

  20. Fungal biodiversity to biotechnology.

    Science.gov (United States)

    Chambergo, Felipe S; Valencia, Estela Y

    2016-03-01

    Fungal habitats include soil, water, and extreme environments. With around 100,000 fungus species already described, it is estimated that 5.1 million fungus species exist on our planet, making fungi one of the largest and most diverse kingdoms of eukaryotes. Fungi show remarkable metabolic features due to a sophisticated genomic network and are important for the production of biotechnological compounds that greatly impact our society in many ways. In this review, we present the current state of knowledge on fungal biodiversity, with special emphasis on filamentous fungi and the most recent discoveries in the field of identification and production of biotechnological compounds. More than 250 fungus species have been studied to produce these biotechnological compounds. This review focuses on three of the branches generally accepted in biotechnological applications, which have been identified by a color code: red, green, and white for pharmaceutical, agricultural, and industrial biotechnology, respectively. We also discuss future prospects for the use of filamentous fungi in biotechnology application.

  1. Applying the archetype approach to the database of a biobank information management system.

    Science.gov (United States)

    Späth, Melanie Bettina; Grimson, Jane

    2011-03-01

    The purpose of this study is to investigate the feasibility of applying the openEHR archetype approach to modelling the data in the database of an existing proprietary biobank information management system. A biobank information management system stores the clinical/phenotypic data of the sample donor and sample related information. The clinical/phenotypic data is potentially sourced from the donor's electronic health record (EHR). The study evaluates the reuse of openEHR archetypes that have been developed for the creation of an interoperable EHR in the context of biobanking, and proposes a new set of archetypes specifically for biobanks. The ultimate goal of the research is the development of an interoperable electronic biomedical research record (eBMRR) to support biomedical knowledge discovery. The database of the prostate cancer biobank of the Irish Prostate Cancer Research Consortium (PCRC), which supports the identification of novel biomarkers for prostate cancer, was taken as the basis for the modelling effort. First the database schema of the biobank was analyzed and reorganized into archetype-friendly concepts. Then, archetype repositories were searched for matching archetypes. Some existing archetypes were reused without change, some were modified or specialized, and new archetypes were developed where needed. The fields of the biobank database schema were then mapped to the elements in the archetypes. Finally, the archetypes were arranged into templates specifically to meet the requirements of the PCRC biobank. A set of 47 archetypes was found to cover all the concepts used in the biobank. Of these, 29 (62%) were reused without change, 6 were modified and/or extended, 1 was specialized, and 11 were newly defined. These archetypes were arranged into 8 templates specifically required for this biobank. A number of issues were encountered in this research. Some arose from the immaturity of the archetype approach, such as immature modelling support tools

  2. From Population Databases to Research and Informed Health Decisions and Policy.

    Science.gov (United States)

    Machluf, Yossy; Tal, Orna; Navon, Amir; Chaiter, Yoram

    2017-01-01

    In the era of big data, the medical community is inspired to maximize the utilization and processing of the rapidly expanding medical datasets for clinical-related and policy-driven research. This requires a medical database that can be aggregated, interpreted, and integrated at both the individual and population levels. Policymakers seek data as a lever for wise, evidence-based decision-making and information-driven policy. Yet, bridging the gap between data collection, research, and policymaking, is a major challenge. To bridge this gap, we propose a four-step model: (A) creating a conjoined task force of all relevant parties to declare a national program to promote collaborations; (B) promoting a national digital records project, or at least a network of synchronized and integrated databases, in an accessible transparent manner; (C) creating an interoperative national research environment to enable the analysis of the organized and integrated data and to generate evidence; and (D) utilizing the evidence to improve decision-making, to support a wisely chosen national policy. For the latter purpose, we also developed a novel multidimensional set of criteria to illuminate insights and estimate the risk for future morbidity based on current medical conditions. Used by policymakers, providers of health plans, caregivers, and health organizations, we presume this model will assist transforming evidence generation to support the design of health policy and programs, as well as improved decision-making about health and health care, at all levels: individual, communal, organizational, and national.

  3. International Trade in Biotechnology Products and Strategic Mandatory Labelling

    OpenAIRE

    Jinji, Naoto

    2003-01-01

    This paper examines strategic motives to impose mandatory labelling of biotechnology products when consumers perceive these products as being of lower quality. When a foreign dominant firm produces a biotechnology product, it is shown that without mandatory labelling fringe firms, which produce a conventional product, provide voluntary labelling as long as voluntary labelling is fully credible. Information on which product is biotechnologically engineered is hence completely disclosed without...

  4. Biotechnology as a competitive edge for the Finnish forest cluster

    OpenAIRE

    Hakala, Terhi

    2007-01-01

    In this study we have collected information by interviewing all identified parties within the Finnish forest sector who might have a potential biotechnology connection : university research groups, research institutions, small and medium-sized biotechnology-companies and up to the largest forest companies. The ultimate goal was to assess how resources have been allocated and biotechnologies utilized within the value chain of the entire forest sector. This study aimed at providing answers to t...

  5. Biotechnology as a Competitive Edge for the Finnish Forest Cluster

    OpenAIRE

    Hakala, Terhi; Haltia, Olli; Hermans, Raine; Kulvik, Martti; Nikinmaa, Hanna; Porcar-Castell, Albert; Pursula, Tiina

    2007-01-01

    In this study we have collected information by interviewing all identified parties within the Finnish forest sector who might have a potential biotechnology connection : university research groups, research institutions, small and medium-sized biotechnology-companies and up to the largest forest companies. The ultimate goal was to assess how resources have been allocated and biotechnologies utilized within the value chain of the entire forest sector. This study aimed at providing answers to t...

  6. Medical Biotechnology Trends and Achievements in Iran

    Science.gov (United States)

    Mahboudi, Fereidoun; Hamedifar, Haleh; Aghajani, Hamideh

    2012-01-01

    A healthcare system has been the most important priority for all governments worldwide. Biotechnology products have affected the promotion of health care over the last thirty years. During the last several decades, Iran has achieved significant success in extending healthcare to the rural areas and in reducing the rates of infant mortality and increasing population growth. Biomedical technology as a converging technology is considered a helpful tool to fulfill the Iranian healthcare missions. The number of biotechnology products has reached 148 in 2012. The total sales have increased to 98 billion USD without considering vaccines and plasma derived proteins in 2012. Iran is one of the leading countries in the Middle East and North Africa in the area of Medical biotechnology. The number of biotechnology medicines launched in Iran is 13 products until 2012. More than 15 products are in pipelines now. Manufacturers are expecting to receive the market release for more than 8 products by the end of 2012. Considering this information, Iran will lead the biotechnology products especially in area of biosimilars in Asia after India in next three years. The present review will discuss leading policy, decision makers’ role, human resource developing system and industry development in medical biotechnology. PMID:23407888

  7. The Mitochondrial Protein Atlas: A Database of Experimentally Verified Information on the Human Mitochondrial Proteome.

    Science.gov (United States)

    Godin, Noa; Eichler, Jerry

    2017-09-01

    Given its central role in various biological systems, as well as its involvement in numerous pathologies, the mitochondrion is one of the best-studied organelles. However, although the mitochondrial genome has been extensively investigated, protein-level information remains partial, and in many cases, hypothetical. The Mitochondrial Protein Atlas (MPA; URL: lifeserv.bgu.ac.il/wb/jeichler/MPA ) is a database that provides a complete, manually curated inventory of only experimentally validated human mitochondrial proteins. The MPA presently contains 911 unique protein entries, each of which is associated with at least one experimentally validated and referenced mitochondrial localization. The MPA also contains experimentally validated and referenced information defining function, structure, involvement in pathologies, interactions with other MPA proteins, as well as the method(s) of analysis used in each instance. Connections to relevant external data sources are offered for each entry, including links to NCBI Gene, PubMed, and Protein Data Bank. The MPA offers a prototype for other information sources that allow for a distinction between what has been confirmed and what remains to be verified experimentally.

  8. Teaching Chemistry Students How To Use Patent Databases and Glean Patent Information

    Science.gov (United States)

    MacMillan, Margy; Shaw, Lawton

    2008-07-01

    Patent literature is an important source of chemical information that is often neglected by chemical educators. This paper describes an effort to teach chemistry students how to use patent databases to search for information on applied chemical technology related to the manufacture of industrial and specialty chemicals. Students in a second-year-level organic chemistry class were shown how to search patent literature as part of a group research paper assignment that involved determining the feasibility of starting an industrial chemical operation to manufacture a given industrial chemical. Students who were assigned high value or specialty chemicals were most likely to cite patent literature in their final papers. Students who were assigned plastics or bulk commodity chemicals were less likely to cite patents. It is suggested that students made choices about the usefulness of patent literature and that patents were most useful when current patents existed and provided the patent owner a competitive advantage. For plastics or commodity chemicals, manufacturing technologies tend to be mature and are well described by more accessible information sources. Suggestions are made for effective introduction of patent literature instruction into upper-level chemistry courses.

  9. GreekLex 2: A comprehensive lexical database with part-of-speech, syllabic, phonological, and stress information.

    Science.gov (United States)

    Kyparissiadis, Antonios; van Heuven, Walter J B; Pitchford, Nicola J; Ledgeway, Timothy

    2017-01-01

    Databases containing lexical properties on any given orthography are crucial for psycholinguistic research. In the last ten years, a number of lexical databases have been developed for Greek. However, these lack important part-of-speech information. Furthermore, the need for alternative procedures for calculating syllabic measurements and stress information, as well as combination of several metrics to investigate linguistic properties of the Greek language are highlighted. To address these issues, we present a new extensive lexical database of Modern Greek (GreekLex 2) with part-of-speech information for each word and accurate syllabification and orthographic information predictive of stress, as well as several measurements of word similarity and phonetic information. The addition of detailed statistical information about Greek part-of-speech, syllabification, and stress neighbourhood allowed novel analyses of stress distribution within different grammatical categories and syllabic lengths to be carried out. Results showed that the statistical preponderance of stress position on the pre-final syllable that is reported for Greek language is dependent upon grammatical category. Additionally, analyses showed that a proportion higher than 90% of the tokens in the database would be stressed correctly solely by relying on stress neighbourhood information. The database and the scripts for orthographic and phonological syllabification as well as phonetic transcription are available at http://www.psychology.nottingham.ac.uk/greeklex/.

  10. Information Management Tools for Classrooms: Exploring Database Management Systems. Technical Report No. 28.

    Science.gov (United States)

    Freeman, Carla; And Others

    In order to understand how the database software or online database functioned in the overall curricula, the use of database management (DBMs) systems was studied at eight elementary and middle schools through classroom observation and interviews with teachers and administrators, librarians, and students. Three overall areas were addressed:…

  11. The Web-Database Connection Tools for Sharing Information on the Campus Intranet.

    Science.gov (United States)

    Thibeault, Nancy E.

    This paper evaluates four tools for creating World Wide Web pages that interface with Microsoft Access databases: DB Gateway, Internet Database Assistant (IDBA), Microsoft Internet Database Connector (IDC), and Cold Fusion. The system requirements and features of each tool are discussed. A sample application, "The Virtual Help Desk"…

  12. 75 FR 31795 - Office of Biotechnology Activities; Recombinant DNA Research: Amended Notice of Meeting

    Science.gov (United States)

    2010-06-04

    ... DEPARTMENT OF HEALTH AND HUMAN SERVICES National Institutes of Health Office of Biotechnology Activities; Recombinant DNA Research: Amended Notice of Meeting ACTION: Notice of cancellation of... information. Dated: May 26, 2010. Jacqueline Corrigan-Curay, Acting Director, Office of Biotechnology...

  13. Usability of some databases for information services in Czechoslovak nuclear programme

    International Nuclear Information System (INIS)

    Kakos, A.

    1988-01-01

    The contents were compared of the databases Chemical Abstracts Search, World Patent Index, Excerpta Medica, Inspec and Compendex with INIS, with regard to possible completing of INIS searches with searches in these other databases. On the basis of the results of test searches made in all said databases on selected topics falling under the INIS scope, concrete cases were determined when INIS searches should be completed with data in some of the other databases. The contents analysis method is described with regard to the concrete search topics and areas are given of the overlapping of the databases with INIS. Numerical results are given. (J.B.). 2 tabs

  14. Research on spatio-temporal database techniques for spatial information service

    Science.gov (United States)

    Zhao, Rong; Wang, Liang; Li, Yuxiang; Fan, Rongshuang; Liu, Ping; Li, Qingyuan

    2007-06-01

    Geographic data should be described by spatial, temporal and attribute components, but the spatio-temporal queries are difficult to be answered within current GIS. This paper describes research into the development and application of spatio-temporal data management system based upon GeoWindows GIS software platform which was developed by Chinese Academy of Surveying and Mapping (CASM). Faced the current and practical requirements of spatial information application, and based on existing GIS platform, one kind of spatio-temporal data model which integrates vector and grid data together was established firstly. Secondly, we solved out the key technique of building temporal data topology, successfully developed a suit of spatio-temporal database management system adopting object-oriented methods. The system provides the temporal data collection, data storage, data management and data display and query functions. Finally, as a case study, we explored the application of spatio-temporal data management system with the administrative region data of multi-history periods of China as the basic data. With all the efforts above, the GIS capacity of management and manipulation in aspect of time and attribute of GIS has been enhanced, and technical reference has been provided for the further development of temporal geographic information system (TGIS).

  15. BIM Guidelines Inform Facilities Management Databases: A Case Study over Time

    Directory of Open Access Journals (Sweden)

    Karen Kensek

    2015-08-01

    Full Text Available A building information model (BIM contains data that can be accessed and exported for other uses during the lifetime of the building especially for facilities management (FM and operations. Working under the guidance of well-designed BIM guidelines to insure completeness and compatibility with FM software, architects and contractors can deliver an information rich data model that is valuable to the client. Large owners such as universities often provide these detailed guidelines and deliverable requirements to their building teams. Investigation of the University of Southern California (USC Facilities Management Service’s (FMS website showed a detailed plan including standards, file names, parameter lists, and other requirements of BIM data, which were specifically designated for facilities management use, as deliverables on new construction projects. Three critical details were also unearthed in the reading of these documents: Revit was the default BIM software; COBie was adapted to help meet facilities management goals; and EcoDomus provided a display of the collected data viewed through Navisworks. Published accounts about the Cinema Arts Complex developed with and under these guidelines reported positive results. Further examination with new projects underway reveal the rapidly changing relational database landscape evident in the new USC “Project Record Revit Requirement Execution Plan (PRxP”.

  16. Life sciences today and tomorrow: emerging biotechnologies.

    Science.gov (United States)

    Williamson, E Diane

    2017-08-01

    The purpose of this review is to survey current, emerging and predicted future biotechnologies which are impacting, or are likely to impact in the future on the life sciences, with a projection for the coming 20 years. This review is intended to discuss current and future technical strategies, and to explore areas of potential growth during the foreseeable future. Information technology approaches have been employed to gather and collate data. Twelve broad categories of biotechnology have been identified which are currently impacting the life sciences and will continue to do so. In some cases, technology areas are being pushed forward by the requirement to deal with contemporary questions such as the need to address the emergence of anti-microbial resistance. In other cases, the biotechnology application is made feasible by advances in allied fields in biophysics (e.g. biosensing) and biochemistry (e.g. bio-imaging). In all cases, the biotechnologies are underpinned by the rapidly advancing fields of information systems, electronic communications and the World Wide Web together with developments in computing power and the capacity to handle extensive biological data. A rationale and narrative is given for the identification of each technology as a growth area. These technologies have been categorized by major applications, and are discussed further. This review highlights: Biotechnology has far-reaching applications which impinge on every aspect of human existence. The applications of biotechnology are currently wide ranging and will become even more diverse in the future. Access to supercomputing facilities and the ability to manipulate large, complex biological datasets, will significantly enhance knowledge and biotechnological development.

  17. Database Quality and Access Issues Relevant to Research Using Anesthesia Information Management System Data.

    Science.gov (United States)

    Epstein, Richard H; Dexter, Franklin

    2018-07-01

    For this special article, we reviewed the computer code, used to extract the data, and the text of all 47 studies published between January 2006 and August 2017 using anesthesia information management system (AIMS) data from Thomas Jefferson University Hospital (TJUH). Data from this institution were used in the largest number (P = .0007) of papers describing the use of AIMS published in this time frame. The AIMS was replaced in April 2017, making this finite sample finite. The objective of the current article was to identify factors that made TJUH successful in publishing anesthesia informatics studies. We examined the structured query language used for each study to examine the extent to which databases outside of the AIMS were used. We examined data quality from the perspectives of completeness, correctness, concordance, plausibility, and currency. Our results were that most could not have been completed without external database sources (36/47, 76.6%; P = .0003 compared with 50%). The operating room management system was linked to the AIMS and was used significantly more frequently (26/36, 72%) than other external sources. Access to these external data sources was provided, allowing exploration of data quality. The TJUH AIMS used high-resolution timestamps (to the nearest 3 milliseconds) and created audit tables to track changes to clinical documentation. Automatic data were recorded at 1-minute intervals and were not editable; data cleaning occurred during analysis. Few paired events with an expected order were out of sequence. Although most data elements were of high quality, there were notable exceptions, such as frequent missing values for estimated blood loss, height, and weight. Some values were duplicated with different units, and others were stored in varying locations. Our conclusions are that linking the TJUH AIMS to the operating room management system was a critical step in enabling publication of multiple studies using AIMS data. Access to this and

  18. From Population Databases to Research and Informed Health Decisions and Policy

    Directory of Open Access Journals (Sweden)

    Yossy Machluf

    2017-09-01

    Full Text Available BackgroundIn the era of big data, the medical community is inspired to maximize the utilization and processing of the rapidly expanding medical datasets for clinical-related and policy-driven research. This requires a medical database that can be aggregated, interpreted, and integrated at both the individual and population levels. Policymakers seek data as a lever for wise, evidence-based decision-making and information-driven policy. Yet, bridging the gap between data collection, research, and policymaking, is a major challenge.The modelTo bridge this gap, we propose a four-step model: (A creating a conjoined task force of all relevant parties to declare a national program to promote collaborations; (B promoting a national digital records project, or at least a network of synchronized and integrated databases, in an accessible transparent manner; (C creating an interoperative national research environment to enable the analysis of the organized and integrated data and to generate evidence; and (D utilizing the evidence to improve decision-making, to support a wisely chosen national policy. For the latter purpose, we also developed a novel multidimensional set of criteria to illuminate insights and estimate the risk for future morbidity based on current medical conditions.ConclusionUsed by policymakers, providers of health plans, caregivers, and health organizations, we presume this model will assist transforming evidence generation to support the design of health policy and programs, as well as improved decision-making about health and health care, at all levels: individual, communal, organizational, and national.

  19. 77 FR 21618 - 60-Day Notice of Proposed Information Collection: Civilian Response Corps Database In-Processing...

    Science.gov (United States)

    2012-04-10

    ... DEPARTMENT OF STATE [Public Notice 7843] 60-Day Notice of Proposed Information Collection: Civilian Response Corps Database In-Processing Electronic Form, OMB Control Number 1405-0168, Form DS-4096... Management and Budget (OMB) approval for the information collection described below. The purpose of this...

  20. Statistics information of rice EST mapping results - RGP estmap2001 | LSDB Archive [Life Science Database Archive metadata

    Lifescience Database Archive (English)

    Full Text Available List Contact us RGP estmap2001 Statistics information of rice EST mapping results Data detail Data name Statistics...of This Database Site Policy | Contact Us Statistics information of rice EST mapping results - RGP estmap2001 | LSDB Archive ...

  1. Construction of a bibliographic information database and development of retrieval system for research reports in nuclear science and technology (II)

    International Nuclear Information System (INIS)

    Han, Duk Haeng; Kim, Tae Whan; Choi, Kwang; Yoo, An Na; Keum, Jong Yong; Kim, In Kwon

    1996-05-01

    The major goal of this project is to construct a bibliographic information database in nuclear engineering and to develop a prototype retrieval system. To give an easy access to microfiche research report, this project has accomplished the construction of microfiche research reports database and the development of retrieval system. The results of the project are as follows; 1. Microfiche research reports database was constructed by downloading from DOE Energy, NTIS, INIS. 2. The retrieval system was developed in host and web version using access point such as title, abstracts, keyword, report number. 6 tabs., 8 figs., 11 refs. (Author) .new

  2. Construction of a bibliographic information database and development of retrieval system for research reports in nuclear science and technology (II)

    Energy Technology Data Exchange (ETDEWEB)

    Han, Duk Haeng; Kim, Tae Whan; Choi, Kwang; Yoo, An Na; Keum, Jong Yong; Kim, In Kwon [Korea Atomic Energy Research Institute, Taejon (Korea, Republic of)

    1996-05-01

    The major goal of this project is to construct a bibliographic information database in nuclear engineering and to develop a prototype retrieval system. To give an easy access to microfiche research report, this project has accomplished the construction of microfiche research reports database and the development of retrieval system. The results of the project are as follows; 1. Microfiche research reports database was constructed by downloading from DOE Energy, NTIS, INIS. 2. The retrieval system was developed in host and web version using access point such as title, abstracts, keyword, report number. 6 tabs., 8 figs., 11 refs. (Author) .new.

  3. Biotechnology and human rights.

    Science.gov (United States)

    Feuillet-Le Mintier, B

    2001-12-01

    Biotechnology permits our world to progress. It's a tool to better apprehend the human being, but as well to let him go ahead. Applied to the living, biotechnologies present the same finality. But since their matter concerns effectively the living, they are the sources of specific dangers and particularly of that one to use the improvements obtained on the human to modify the human species. The right of the persons has to find its place to avoid that the fundamental rights of the human personality shall undergo harm. This mission assigned to the right of the persons is as so much invaluable that the economical stakes are particularly important in the domain of the biotechnologies.

  4. Biotechnological production of vanillin.

    Science.gov (United States)

    Priefert, H; Rabenhorst, J; Steinbüchel, A

    2001-08-01

    Vanillin is one of the most important aromatic flavor compounds used in foods, beverages, perfumes, and pharmaceuticals and is produced on a scale of more than 10 thousand tons per year by the industry through chemical synthesis. Alternative biotechnology-based approaches for the production are based on bioconversion of lignin, phenolic stilbenes, isoeugenol, eugenol, ferulic acid, or aromatic amino acids, and on de novo biosynthesis, applying fungi, bacteria, plant cells, or genetically engineered microorganisms. Here, the different biosynthesis routes involved in biotechnological vanillin production are discussed.

  5. Colloids in Biotechnology

    CERN Document Server

    Fanun, Monzer

    2010-01-01

    Colloids have come a long way from when Thomas Graham coined the term colloid to describe 'pseudo solutions'. This book enables scientists to close the gap between extensive research and translation into commercial options in biomedicine and biotechnology. It covers biosurfactants and surface properties, phase behavior, and orientational change of surfactant mixtures with peptides at the interface. It also covers adsorption of polymers and biopolymers on the surface and interface, discusses colloidal nanoparticles and their use in biotechnology, and delves into bioadhesion and microencapsulati

  6. Agave biotechnology: an overview.

    Science.gov (United States)

    Nava-Cruz, Naivy Y; Medina-Morales, Miguel A; Martinez, José L; Rodriguez, R; Aguilar, Cristóbal N

    2015-01-01

    Agaves are plants of importance both in Mexican culture and economy and in other Latin-American countries. Mexico is reported to be the place of Agave origin, where today, scientists are looking for different industrial applications without compromising its sustainability and preserving the environment. To make it possible, a deep knowledge of all aspects involved in production process, agro-ecological management and plant biochemistry and physiology is required. Agave biotechnology research has been focusing on bio-fuels, beverages, foods, fibers, saponins among others. In this review, we present the advances and challenges of Agave biotechnology.

  7. Colorado Late Cenozoic Fault and Fold Database and Internet Map Server: User-friendly technology for complex information

    Science.gov (United States)

    Morgan, K.S.; Pattyn, G.J.; Morgan, M.L.

    2005-01-01

    Internet mapping applications for geologic data allow simultaneous data delivery and collection, enabling quick data modification while efficiently supplying the end user with information. Utilizing Web-based technologies, the Colorado Geological Survey's Colorado Late Cenozoic Fault and Fold Database was transformed from a monothematic, nonspatial Microsoft Access database into a complex information set incorporating multiple data sources. The resulting user-friendly format supports easy analysis and browsing. The core of the application is the Microsoft Access database, which contains information compiled from available literature about faults and folds that are known or suspected to have moved during the late Cenozoic. The database contains nonspatial fields such as structure type, age, and rate of movement. Geographic locations of the fault and fold traces were compiled from previous studies at 1:250,000 scale to form a spatial database containing information such as length and strike. Integration of the two databases allowed both spatial and nonspatial information to be presented on the Internet as a single dataset (http://geosurvey.state.co.us/pubs/ceno/). The user-friendly interface enables users to view and query the data in an integrated manner, thus providing multiple ways to locate desired information. Retaining the digital data format also allows continuous data updating and quick delivery of newly acquired information. This dataset is a valuable resource to anyone interested in earthquake hazards and the activity of faults and folds in Colorado. Additional geologic hazard layers and imagery may aid in decision support and hazard evaluation. The up-to-date and customizable maps are invaluable tools for researchers or the public.

  8. Current and Future Leaders' Perceptions of Agricultural Biotechnology

    Science.gov (United States)

    Wingenbach, Gary J.; Miller, Rene P.

    2009-01-01

    Were elected state FFA officers' attitudes toward agricultural biotechnology significantly different from elected Texas legislators' attitudes about the same topic? The purpose of this study was to determine if differences existed in agricultural biotechnology perceptions or information source preferences when compared by leadership status:…

  9. Scalable Database Design of End-Game Model with Decoupled Countermeasure and Threat Information

    Science.gov (United States)

    2017-11-01

    the Army Modular Active Protection System (MAPS) program to provide end-to-end APS modeling and simulation capabilities. The SSES simulation features...research project of scalable database design was initiated in support of SSES modularization efforts with respect to 4 major software components...Iron Curtain KE kinetic energy MAPS Modular Active Protective System OLE DB object linking and embedding database RDB relational database RPG

  10. Disclosing Biology Teachers' Beliefs about Biotechnology and Biotechnology Education

    Science.gov (United States)

    Fonseca, Maria Joao; Costa, Patricio; Lencastre, Leonor; Tavares, Fernando

    2012-01-01

    Teachers have been shown to frequently avoid addressing biotechnology topics. Aiming to understand the extent to which teachers' scarce engagement in biotechnology teaching is influenced by their beliefs and/or by extrinsic constraints, such as practical limitations, this study evaluates biology teachers' beliefs about biotechnology and…

  11. Concepts in Biotechnology An Affordable Overview of Biotechnology ...

    Indian Academy of Sciences (India)

    Home; Journals; Resonance – Journal of Science Education; Volume 2; Issue 9. Concepts in Biotechnology An Affordable Overview of Biotechnology Through Self Study ... Author Affiliations. Narayan S Punekar1. Molecular Enzymology Group, Biotechnology Centre, Indian Institute of Technology, Mumbai 400 076, India.

  12. On the choice of an optimal value-set of qualitative attributes for information retrieval in databases

    International Nuclear Information System (INIS)

    Ryjov, A.; Loginov, D.

    1994-01-01

    The problem of choosing an optimal set of significances of qualitative attributes for information retrieval in databases is addressed. Given a particular database, a set of significances is called optimal if it results in the minimization of losses of information and information noise for information retrieval in the data base. Obviously, such a set of significances depends on the statistical parameters of the data base. The software, which enables to calculate on the basis of the statistical parameters of the given data base, the losses of information and the information noise for arbitrary sets of significances of qualitative attributes, is described. The software also permits to compare various sets of significances of qualitative attributes and to choose the optimal set of significances

  13. Searching for evidence or approval? A commentary on database search in systematic reviews and alternative information retrieval methodologies.

    Science.gov (United States)

    Delaney, Aogán; Tamás, Peter A

    2018-03-01

    Despite recognition that database search alone is inadequate even within the health sciences, it appears that reviewers in fields that have adopted systematic review are choosing to rely primarily, or only, on database search for information retrieval. This commentary reminds readers of factors that call into question the appropriateness of default reliance on database searches particularly as systematic review is adapted for use in new and lower consensus fields. It then discusses alternative methods for information retrieval that require development, formalisation, and evaluation. Our goals are to encourage reviewers to reflect critically and transparently on their choice of information retrieval methods and to encourage investment in research on alternatives. Copyright © 2017 John Wiley & Sons, Ltd.

  14. ENVIRONMENTAL RISK MANAGEMENT OF BIOTECHNOLOGY

    Science.gov (United States)

    The last two decades have shown remarkable advances in the field of biotechnology. We have processes using biotechnology to produce materials from commodity chemicals to pharmaceuticals. The application to agriculture has shown the introduction of transgenic crops with pesticidal...

  15. DATABASES DEVELOPED IN INDIA FOR BIOLOGICAL SCIENCES

    Directory of Open Access Journals (Sweden)

    Gitanjali Yadav

    2017-09-01

    Full Text Available The complexity of biological systems requires use of a variety of experimental methods with ever increasing sophistication to probe various cellular processes at molecular and atomic resolution. The availability of technologies for determining nucleic acid sequences of genes and atomic resolution structures of biomolecules prompted development of major biological databases like GenBank and PDB almost four decades ago. India was one of the few countries to realize early, the utility of such databases for progress in modern biology/biotechnology. Department of Biotechnology (DBT, India established Biotechnology Information System (BTIS network in late eighties. Starting with the genome sequencing revolution at the turn of the century, application of high-throughput sequencing technologies in biology and medicine for analysis of genomes, transcriptomes, epigenomes and microbiomes have generated massive volumes of sequence data. BTIS network has not only provided state of the art computational infrastructure to research institutes and universities for utilizing various biological databases developed abroad in their research, it has also actively promoted research and development (R&D projects in Bioinformatics to develop a variety of biological databases in diverse areas. It is encouraging to note that, a large number of biological databases or data driven software tools developed in India, have been published in leading peer reviewed international journals like Nucleic Acids Research, Bioinformatics, Database, BMC, PLoS and NPG series publication. Some of these databases are not only unique, they are also highly accessed as reflected in number of citations. Apart from databases developed by individual research groups, BTIS has initiated consortium projects to develop major India centric databases on Mycobacterium tuberculosis, Rice and Mango, which can potentially have practical applications in health and agriculture. Many of these biological

  16. Brain Stroke Detection by Microwaves Using Prior Information from Clinical Databases

    Directory of Open Access Journals (Sweden)

    Natalia Irishina

    2013-01-01

    Full Text Available Microwave tomographic imaging is an inexpensive, noninvasive modality of media dielectric properties reconstruction which can be utilized as a screening method in clinical applications such as breast cancer and brain stroke detection. For breast cancer detection, the iterative algorithm of structural inversion with level sets provides well-defined boundaries and incorporates an intrinsic regularization, which permits to discover small lesions. However, in case of brain lesion, the inverse problem is much more difficult due to the skull, which causes low microwave penetration and highly noisy data. In addition, cerebral liquid has dielectric properties similar to those of blood, which makes the inversion more complicated. Nevertheless, the contrast in the conductivity and permittivity values in this situation is significant due to blood high dielectric values compared to those of surrounding grey and white matter tissues. We show that using brain MRI images as prior information about brain's configuration, along with known brain dielectric properties, and the intrinsic regularization by structural inversion, allows successful and rapid stroke detection even in difficult cases. The method has been applied to 2D slices created from a database of 3D real MRI phantom images to effectively detect lesions larger than 2.5 × 10−2 m diameter.

  17. Prioritizing PubMed articles for the Comparative Toxicogenomic Database utilizing semantic information.

    Science.gov (United States)

    Kim, Sun; Kim, Won; Wei, Chih-Hsuan; Lu, Zhiyong; Wilbur, W John

    2012-01-01

    The Comparative Toxicogenomics Database (CTD) contains manually curated literature that describes chemical-gene interactions, chemical-disease relationships and gene-disease relationships. Finding articles containing this information is the first and an important step to assist manual curation efficiency. However, the complex nature of named entities and their relationships make it challenging to choose relevant articles. In this article, we introduce a machine learning framework for prioritizing CTD-relevant articles based on our prior system for the protein-protein interaction article classification task in BioCreative III. To address new challenges in the CTD task, we explore a new entity identification method for genes, chemicals and diseases. In addition, latent topics are analyzed and used as a feature type to overcome the small size of the training set. Applied to the BioCreative 2012 Triage dataset, our method achieved 0.8030 mean average precision (MAP) in the official runs, resulting in the top MAP system among participants. Integrated with PubTator, a Web interface for annotating biomedical literature, the proposed system also received a positive review from the CTD curation team.

  18. INIS: international nuclear information system. World first international database on pacific uses of nuclear sciences and technologies

    International Nuclear Information System (INIS)

    Surmont, J.; Constant, A.; Guille, N.; Le Blanc, A.; Mouffron, O.; Anguise, P.; Jouve, J.J.

    2007-01-01

    This poster, prepared for the 2007 CEA meetings on scientific and technical information, presents the INIS information system, the document-types content and subject coverage of the database, the French contribution to this system thanks to the INIS team of the CEA-Saclay, the input preparation process, and an example of valorization of a scientific and historical patrimony with the CEA/IAEA joint project of digitization of about 2760 CEA reports published between 1948 and 1969. All these reports have been digitized by the IAEA and analyzed by CEA, and entered in the INIS database with a link to the full text. (J.S.)

  19. Information of the markers in each chromosome - RGP caps | LSDB Archive [Life Science Database Archive metadata

    Lifescience Database Archive (English)

    Full Text Available . Comment Comment Image file name 1 Image file name 1 of gel electrophoresis Imag...e file name 2 Image file name 2 of gel electrophoresis Image file name 3 Image file name 3 of gel electrophoresis... Image file name 4 Image file name 4 of gel electrophoresis About This Database Database Description Do

  20. Biotechnologies and Human Dignity

    Science.gov (United States)

    Sweet, William; Masciulli, Joseph

    2011-01-01

    In this article, the authors review some contemporary cases where biotechnologies have been employed, where they have had global implications, and where there has been considerable debate. The authors argue that the concept of dignity, which lies at the center of such documents as the 2005 Universal Declaration on Bioethics and Human Rights, the…

  1. Biotechnological Innovations in Aquaculture

    Directory of Open Access Journals (Sweden)

    Mangesh M. Bhosale

    2016-04-01

    Full Text Available Aquaculture is gaining commendable importance to meet the required protein source for ever increasing human population. The aquaculture industry is currently facing problems on developing economically viable production systems by reducing the impact on environment. Sustainable and enhanced fish production from aquaculture may be better achieved through application of recent biotechnological innovations. Utilisation of transgenic technology has led to production of fishes with faster growth rate with disease resistance. The full advantage of this technology could not be achieved due to concern of acceptance for Genetically Modified Organisms (GMOs. The biotechnological intervention in developing plant based feed ingredient in place of fish meal which contain high phosphorus is of prime area of attention for fish feed industry. The replacement of fish meal will also reduce fish feed cost to a greater extent. Year round fish seed production of carps through various biotechnological interventions is also need of the hour. This paper discusses technical, environmental and managerial considerations regarding the use of these biotechnological tools in aquaculture along with the advantages of research application and its commercialization.

  2. Biotechnology: challenges and prospects

    Energy Technology Data Exchange (ETDEWEB)

    Sasson, A.

    1985-04-01

    Rapidly occurring technological breakthroughs in the wake of numerous discoveries in different fields, such as biochemistry, genetic engineering as well as cellular and molecular biology as described in this paper have a variety of industrial applications, and forcasts covering these and various other fields have been made. The emerging bio-industry, covering diverse industries, such as chemical, food, pharmaceutical, etc., as well as the domains of health, environmental protection and abatement of pollution present challenging prospects. Several biotechnology processes relating to bioenergy, fermentation, waste transformation, vaccines, etc. are of particular interest to the developing countries. The 'functioning systems' resulting from the breakthrouth in genetic engineering, entailing extraordinary refinement of analytical techniques and technological progress, pose the challenging task of harnessing them to the advantage of mankind. Providing effective legal protection, conducive to the development of biotechnologies-their innovative process and technological change-is a matter of serious concern, involving practical and economical considerations. Several other issues and questions, such as risk prevention and management of potential dangers and hazards in genetic recombination operation by way of safety regulations and necessary guidelines, questions relating to the clinical trials of the interferons-the wonder drug-as well as questions of professional ethics are raised by biotechnologies. Industry-funded research in biotechnology, where scientific and commercial imperatives are interlocked, has for instance, its repercussions on the traditional thrust of university system, specially the sanctity of autonomy for basic research.

  3. Biotechnology--Biotechnical Systems.

    Science.gov (United States)

    Ruggles, Stanford

    1990-01-01

    The perspective of biotechnology and its development in the K-12 technology education curriculum are described. The content curriculum development and implications for activities are discussed. The difference between a curriculum focused on the activities of industry compared to one that addresses technology as it pervades all human endeavors is…

  4. Biotechnology of trees: Chestnut

    Science.gov (United States)

    C.D. Nelson; W.A. Powell; S.A. Merkle; J.E. Carlson; F.V. Hebard; N Islam-Faridi; M.E. Staton; L. Georgi

    2014-01-01

    Biotechnology has been practiced on chestnuts (Castanea spp.) for many decades, including vegetative propagation, controlled crossing followed by testing and selection, genetic and cytogenetic mapping, genetic modifi cation, and gene and genome sequencing. Vegetative propagation methods have ranged from grafting and rooting to somatic embryogenesis, often in...

  5. Biotechnology in weed control

    Science.gov (United States)

    Biotechnology can be used to enhance the management of weeds in several ways. Crops have been made resistant to herbicides by inserting transgenes that impart herbicide resistance into the plant genome. Glyphosate and glufosinate-resistant crops are commercialized in North America and crops made res...

  6. State responses to biotechnology.

    Science.gov (United States)

    Harris, Rebecca C

    2015-01-01

    This article reviews biotechnology legislation in the 50 states for 11 policy areas spanning 1990-2010, an era of immense growth in biotechnology, genetic knowledge, and significant policy development. Policies regarding health insurance, life insurance, long-term care insurance, DNA data bank collection, biotech research protection, biotech promotion and support, employment discrimination, genetic counselor licensing, human cloning, and genetic privacy each represent major policy responses arising from biotechnology and coinciding with key areas of state regulation (insurance, criminal justice, economic development, labor law, health and safety, privacy, and property rights). This analysis seeks to answer three questions regarding biotechnology legislation at the state level: who is acting (policy adoption), when is policy adopted (policy timing), and what is policy doing (policy content). Theoretical concerns examine state ideology (conservative or liberal), policy type (economic or moral), and the role of external events (federal law, news events, etc.) on state policy adoption. Findings suggest ideological patterns in adoption, timing, and content of biotech policy. Findings also suggest economic policies tend to be more uniform in content than moral policies, and findings also document a clear link between federal policy development, external events, and state policy response.

  7. TSCA Biotechnology Notifications Status

    Science.gov (United States)

    This Notifications Table lists only those submissions received under the Biotechnology Regulation, beginning in 1998. From the Table, you can link to a brief summary of select submission and, in many cases, to a fact sheet on the decision reached by OPPT.

  8. 76 FR 27301 - Syngenta Biotechnology, Inc.; Availability of Petition, Plant Pest Risk Assessment, and...

    Science.gov (United States)

    2011-05-11

    ...] Syngenta Biotechnology, Inc.; Availability of Petition, Plant Pest Risk Assessment, and Environmental... Plant Health Inspection Service has received a petition from Syngenta Biotechnology, Inc., seeking a.../brs/aphisdocs/07_10801p _dpra.pdf. FOR FURTHER INFORMATION CONTACT: Mr. Rick Coker, Biotechnology...

  9. Knowledge and Attitudes towards Biotechnology of Elementary Education Preservice Teachers: The First Spanish Experience

    Science.gov (United States)

    Casanoves, Marina; González, Ángel; Salvadó, Zoel; Haro, Juan; Novo, Maite

    2015-01-01

    Due to the important impact that biotechnology has on current Western societies, well-informed critical citizens are needed. People prepared to make conscious decisions about aspects of biotechnology that relate to their own lives. Teachers play a central role in all education systems. Thus, the biotechnological literacy of preservice teachers is…

  10. Connecting Learners: The Role of Biotechnology Programme in Preparing Students for the Industry

    Science.gov (United States)

    Mohd Saruan, Nadiah; Sagran, Avinash; Fadzil, Kamal Solhaimi; Razali, Zuliana; Ow Phui San, Rebecca; Somasundram, Chandran

    2015-01-01

    The recent growth of biotechnology requires a wide range of expertise within the industry. Education is the primary platform for students to gain information and knowledge on biotechnology. In Malaysia where biotechnology is relatively new, education programs and courses must be tailored to meet the demands of the industry. A combination of…

  11. [Cystic Fibrosis Cloud database: An information system for storage and management of clinical and microbiological data of cystic fibrosis patients].

    Science.gov (United States)

    Prieto, Claudia I; Palau, María J; Martina, Pablo; Achiary, Carlos; Achiary, Andrés; Bettiol, Marisa; Montanaro, Patricia; Cazzola, María L; Leguizamón, Mariana; Massillo, Cintia; Figoli, Cecilia; Valeiras, Brenda; Perez, Silvia; Rentería, Fernando; Diez, Graciela; Yantorno, Osvaldo M; Bosch, Alejandra

    2016-01-01

    The epidemiological and clinical management of cystic fibrosis (CF) patients suffering from acute pulmonary exacerbations or chronic lung infections demands continuous updating of medical and microbiological processes associated with the constant evolution of pathogens during host colonization. In order to monitor the dynamics of these processes, it is essential to have expert systems capable of storing and subsequently extracting the information generated from different studies of the patients and microorganisms isolated from them. In this work we have designed and developed an on-line database based on an information system that allows to store, manage and visualize data from clinical studies and microbiological analysis of bacteria obtained from the respiratory tract of patients suffering from cystic fibrosis. The information system, named Cystic Fibrosis Cloud database is available on the http://servoy.infocomsa.com/cfc_database site and is composed of a main database and a web-based interface, which uses Servoy's product architecture based on Java technology. Although the CFC database system can be implemented as a local program for private use in CF centers, it can also be used, updated and shared by different users who can access the stored information in a systematic, practical and safe manner. The implementation of the CFC database could have a significant impact on the monitoring of respiratory infections, the prevention of exacerbations, the detection of emerging organisms, and the adequacy of control strategies for lung infections in CF patients. Copyright © 2015 Asociación Argentina de Microbiología. Publicado por Elsevier España, S.L.U. All rights reserved.

  12. Biotechnological Patents Applications of the Deuterium Oxide in Human Health.

    Science.gov (United States)

    da S Mariano, Reysla M; Bila, Wendell C; Trindade, Maria Jaciara F; Lamounier, Joel A; Galdino, Alexsandro S

    2017-01-01

    Deuterium oxide is a molecule that has been used for decades in several studies related to human health. Currently, studies on D2O have mobilized a "Race for Patenting" worldwide. Several patents have been registered from biomedical and technological studies of D2O showing the potential of this stable isotope in industry and health care ecosystems. Most of the patents related to the applications of the deuterium oxide in human health have been summarized in this review. The following patents databases were consulted: European Patent Office (Espacenet), the United States Patent and Trademark Office (USPTO), the United States Latin America Patents (LATIPAT), Patent scope -Search International and National Patent Collections (WIPO), Google Patents and Free Patents Online. With this review, the information was collected on recent publications including 22 patents related to deuterium oxide and its applications in different areas. This review showed that deuterium oxide is a promising component in different areas, including biotechnology, chemistry and medicine. In addition, the knowledge of this compound was covered, reinforcing its importance in the field of biotechnology and human health. Copyright© Bentham Science Publishers; For any queries, please email at epub@benthamscience.org.

  13. Informational database methodology for urban risk analysis.Case study: the historic centre of Bucharest

    Science.gov (United States)

    Armas, I.; Dumitrascu, S.

    2009-04-01

    , but is also a very populated area, this being factors that favour a high susceptibility level. In addition, the majority of the buildings are included in the first and second categories of seismic risk, being built between 1875 and 1940, the age of the buildings establishing an increased vulnerability to natural hazards. The methodology was developed through the contribution of three partner universities from Bucharest: the University of Bucharest, the Academy for Economic Studies and the Technical University of Constructions. The method suggested was based on the analysis and processing of digital and statistical spatial information resulted from 1:500 topographical plans, satellite pictures, archives and historical maps used for the identification of the age of the buildings. Also, an important stage was represented by the field investigations that resulted with the data used in the assessment of the buildings: year of construction, location and vicinity, height, number of floors, state and function of the building, equipment and construction type. The information collected from the field together with the data resulted from the digitization of the ortophotoplans were inserted in ArcGIS in order to compile the database. Furthermore, the team from the Cybernetics Faculty developed a special software package in Visual Studio and SQL server in order to insert the sheets in GIS so that they could be statistically processed. The final product of the study is a program that includes as main functions editing, the analysis based on selected factors (individual or group) and viewing of building information in the shape of maps or 3D visualization. The strengths of the informational system resulted are given by the extended range of applicability, the short processing period, accessibility, capacity of support for a large amount of information and, thus, standing out as an adequate instrument to fit the needs of a susceptible population.

  14. Non-Price Competition and the Structure of the Online Information Industry: Q-Analysis of Medical Databases and Hosts.

    Science.gov (United States)

    Davies, Roy

    1987-01-01

    Discussion of the online information industry emphasizes the effects of non-price competition on its structure and the firms involved. Q-analysis is applied to data on medical databases and hosts, changes over a three-year period are identified, and an optimum structure for the industry based on economic theory is considered. (Author/LRW)

  15. Oil and biotechnology

    Energy Technology Data Exchange (ETDEWEB)

    Yasui, Yoshiaki

    1988-06-01

    The secondary oil recovery due to microorganisms and the production of useful substances from oil distillates using microorganisms are described as examples to solidify the relationship between oil and biotechnology. The secondary crude-oil recovery has been carried out due to the microorganism drive process, which includes the on-the-ground and underground processes. Although the microorganism drive process has been investigated for many years, the selection of the microorganisms is not completely established. Many uncertainties still remain regarding the technical and economic aspects. The single cell protein (SCP) is an example of industrial success in the production of useful substances from the oil. Rumania has produced SCP from normal paraffin and the U. K. from the methanol and the products are used as the protein source for animals. Remarkable progress in the functional efficiency of microorganisms is expected due to the biotechnology for both applications. (4 tabs)

  16. Environmental Biotechnology in China

    Science.gov (United States)

    Liu, Shuang Jiang; Liu, Lei; Chaudhry, Muhammad Tausif; Wang, Lei; Chen, Ying Guang; Zhou, Qi; Liu, He; Chen, Jian

    Environmental biotechnology has emerged as an important measure to tackle the environmental pollution as China experiences great economic success. Over the past decade, much emphasis has been paid to the following fields in environmental biotechnology: microbial degradation of toxic and organic chemicals, bio-treatment of wastewater, waste recycling. The Chinese researchers have done a lot of work to understand the natural degradation processes for organic and toxic compounds and finally to clean these compounds from polluted environments. For the treatment of wastewater, many new processes were proposed and optimized to meet the more strict effluent standards in China. Finally, more and more attention has been paid to the reuse of discharged wastes. In this chapter we review the development in the above fields.

  17. Opportunities in biotechnology.

    Science.gov (United States)

    Gartland, Kevan M A; Gartland, Jill S

    2018-06-08

    Strategies for biotechnology must take account of opportunities for research, innovation and business growth. At a regional level, public-private collaborations provide potential for such growth and the creation of centres of excellence. By considering recent progress in areas such as genomics, healthcare diagnostics, synthetic biology, gene editing and bio-digital technologies, opportunities for smart, strategic and specialised investment are discussed. These opportunities often involve convergent or disruptive technologies, combining for example elements of pharma-science, molecular biology, bioinformatics and novel device development to enhance biotechnology and the life sciences. Analytical applications use novel devices in mobile health, predictive diagnostics and stratified medicine. Synthetic biology provides opportunities for new product development and increased efficiency for existing processes. Successful centres of excellence should promote public-private business partnerships, clustering and global collaborations based on excellence, smart strategies and innovation if they are to remain sustainable in the longer term. Copyright © 2018. Published by Elsevier B.V.

  18. Electron shuttles in biotechnology.

    Science.gov (United States)

    Watanabe, Kazuya; Manefield, Mike; Lee, Matthew; Kouzuma, Atsushi

    2009-12-01

    Electron-shuttling compounds (electron shuttles [ESs], or redox mediators) are essential components in intracellular electron transfer, while microbes also utilize self-produced and naturally present ESs for extracellular electron transfer. These compounds assist in microbial energy metabolism by facilitating electron transfer between microbes, from electron-donating substances to microbes, and/or from microbes to electron-accepting substances. Artificially supplemented ESs can create new routes of electron flow in the microbial energy metabolism, thereby opening up new possibilities for the application of microbes to biotechnology processes. Typical examples of such processes include halogenated-organics bioremediation, azo-dye decolorization, and microbial fuel cells. Herein we suggest that ESs can be applied widely to create new microbial biotechnology processes.

  19. Biotechnology in maize breeding

    Directory of Open Access Journals (Sweden)

    Mladenović-Drinić Snežana

    2004-01-01

    Full Text Available Maize is one of the most important economic crops and the best studied and most tractable genetic system among monocots. The development of biotechnology has led to a great increase in our knowledge of maize genetics and understanding of the structure and behaviour of maize genomes. Conventional breeding practices can now be complemented by a number of new and powerful techniques. Some of these often referred to as molecular methods, enable scientists to see the layout of the entire genome of any organism and to select plants with preferred characteristics by "reading" at the molecular level, saving precious time and resources. DNA markers have provided valuable tools in various analyses ranging from phylogenetic analysis to the positional cloning of genes. Application of molecular markers for genetic studies of maize include: assessment of genetic variability and characterization of germ plasm, identification and fingerprinting of genotypes, estimation of genetic distance, detection of monogamic and quantitative trait loci, marker assisted selection, identification of sequence of useful candidate genes, etc. The development of high-density molecular maps which has been facilitated by PCR-based markers, have made the mapping and tagging of almost any trait possible and serve as bases for marker assisted selection. Sequencing of maize genomes would help to elucidate gene function, gene regulation and their expression. Modern biotechnology also includes an array of tools for introducing or deieting a particular gene or genes to produce plants with novel traits. Development of informatics and biotechnology are resulted in bioinformatic as well as in expansion of microarrey technique. Modern biotechnologies could complement and improve the efficiency of traditional selection and breeding techniques to enhance agricultural productivity.

  20. BIOTECHNOLOGY BIOPRODUCTS "HEALING-1"

    Directory of Open Access Journals (Sweden)

    S. I. Artiukhova

    2014-01-01

    Full Text Available Summary. The article presents data on the development of technology and qualitative research, bio-products «Healing-1». One of the promising directions in food biotechnology is the development of new integrated starter-based consortia of microorganisms, which have higher activity compared with cultures prepared using pure cultures. So it was interesting studies on the development of new biotechnology and bio-based microbial consortium of lactic acid bacteria. Based on the analysis of biotechnological properties of native cultures created a new consortium of microorganisms containing lactic acid streptococci and bacilli, allowing the maximum extent possible to implement the physiological, biochemical and technological potential of microorganisms. Scientifically substantiated and experimentally developed a new biotechnology production of bioproducts «Healing-1», obtained on the basis of microbial consortium with broad spectrum antimicrobial activity. Experimentally investigated quality parameters of organic food «Healing-1» using a new microbial consortium as freshly prepared and during storage. Found that antagonistic activity of microflora bio «Healing-1» with respect to pathogenic and conditionally pathogenic bacteria, as well as its resistance to substances in the gastrointestinal tract of man is more pronounced compared to bioproducts obtained using a separate starter, members of the microbial consortium. It should be noted a more pronounced synthesis of exopolysaccharides in bioproduct «Healing-1», which leads to increased viscosity of the system and improves the consistency of bio. New bioproducts have good organoleptic characteristics and contain a high number of viable cells of lactic acid bacteria. High stability and survival of lactic acid bacteria during storage. In the study of attacked proteins bioproducts digestive proteinases «in vitro» found that the fermentation of milk microbial consortium increases the digestibility

  1. Practicing environmental biotechnology

    OpenAIRE

    Bruce E.Rittmann

    2014-01-01

    Environmental biotechnology involves ″managing microbial communities to provide services to society″.Its success comes from partnering with prokaryotic microorganisms,whose wideranging metabolic capabilities can be harnessed to destroy pollutants and to generate renewable materials.Partnering with microorganisms requires that we understand them well,and important advances in molecular microbial ecology,analytical chemistry,and mathematical modeling are making it possible to look inside the b...

  2. Biotechnology's foreign policy.

    Science.gov (United States)

    Feldbaum, Carl

    2002-01-01

    From its inception, biotechnology has been a uniquely international enterprise. An American and an Englishman working together elucidated the structure of DNA almost 50 years ago; more recently, the Human Genome Project linked researchers around the world, from the Baylor College of Medicine in Houston to the Beijing Human Genome Center. Today our industry's researchers hail from African villages and Manhattan high rises; from Munich and Melbourne; from London, Ontario, and London, England; from Scotland and Nova Scotia--New Scotland; from Calcutta and Calgary. But in the beginning, the infrastructure that supported these efforts--intellectual property, venture capital, streamlined technology transfer--was less widely dispersed and the world's brightest biotech researchers clustered in only half a dozen scientific Meccas. Previous technological revolutions have spread around the world. Following in their footsteps, biotechnology's global diaspora seems inevitable, especially since governments are promoting it. But as our science and business emigrate from early strongholds in the United States, Canada and Europe across oceans and borders and into new cultures, international tensions over biotechnology continue to grow. In just the last few years, controversies have rolled over R&D spending priorities, genetic patents, bioprospecting, transgenic agriculture and drug pricing. My premise today is that our industry needs to formulate its first foreign policy, one which is cognizant of the miserable judgments and mistakes of other industries--and avoids them.

  3. Practicing environmental biotechnology

    Directory of Open Access Journals (Sweden)

    Bruce E.Rittmann

    2014-02-01

    Full Text Available Environmental biotechnology involves ″managing microbial communities to provide services to society″.Its success comes from partnering with prokaryotic microorganisms,whose wideranging metabolic capabilities can be harnessed to destroy pollutants and to generate renewable materials.Partnering with microorganisms requires that we understand them well,and important advances in molecular microbial ecology,analytical chemistry,and mathematical modeling are making it possible to look inside the black box of microbial communities.Also crucial is translating the understanding to biotechnological processes that ″work for the microorganisms so that they work for us″.Successful translation demands novel reactor designs,application of advanced materials,and partnering with practitioners and users.The Swette Center for Environmental Biotechnology,founded in at Arizona State University in 2005,brings together the science and engineering tools in an interdisciplinary environment.The Center emphasizes teamwork and collaborations with research and practice partners around the world.Three new technologies illustrate how the Center applies these principles to ″work for the microorganisms″:the H2-based membrane biofilm reactor (MBfR for reducing many oxidized contaminants in water,the microbial electrochemical cells (MXCs for converting organic wastes into renewable products,and Intimately Coupled PhotoBioCatalysis (ICPBC to detoxify very difficult to biodegrade organic pollutants.

  4. TCMGeneDIT: a database for associated traditional Chinese medicine, gene and disease information using text mining

    Directory of Open Access Journals (Sweden)

    Chen Hsin-Hsi

    2008-10-01

    Full Text Available Abstract Background Traditional Chinese Medicine (TCM, a complementary and alternative medical system in Western countries, has been used to treat various diseases over thousands of years in East Asian countries. In recent years, many herbal medicines were found to exhibit a variety of effects through regulating a wide range of gene expressions or protein activities. As available TCM data continue to accumulate rapidly, an urgent need for exploring these resources systematically is imperative, so as to effectively utilize the large volume of literature. Methods TCM, gene, disease, biological pathway and protein-protein interaction information were collected from public databases. For association discovery, the TCM names, gene names, disease names, TCM ingredients and effects were used to annotate the literature corpus obtained from PubMed. The concept to mine entity associations was based on hypothesis testing and collocation analysis. The annotated corpus was processed with natural language processing tools and rule-based approaches were applied to the sentences for extracting the relations between TCM effecters and effects. Results We developed a database, TCMGeneDIT, to provide association information about TCMs, genes, diseases, TCM effects and TCM ingredients mined from vast amount of biomedical literature. Integrated protein-protein interaction and biological pathways information are also available for exploring the regulations of genes associated with TCM curative effects. In addition, the transitive relationships among genes, TCMs and diseases could be inferred through the shared intermediates. Furthermore, TCMGeneDIT is useful in understanding the possible therapeutic mechanisms of TCMs via gene regulations and deducing synergistic or antagonistic contributions of the prescription components to the overall therapeutic effects. The database is now available at http://tcm.lifescience.ntu.edu.tw/. Conclusion TCMGeneDIT is a unique database

  5. Construction Biotechnology: a new area of biotechnological research and applications.

    Science.gov (United States)

    Stabnikov, Viktor; Ivanov, Volodymyr; Chu, Jian

    2015-09-01

    A new scientific and engineering discipline, Construction Biotechnology, is developing exponentially during the last decade. The major directions of this discipline are selection of microorganisms and development of the microbially-mediated construction processes and biotechnologies for the production of construction biomaterials. The products of construction biotechnologies are low cost, sustainable, and environmentally friendly microbial biocements and biogrouts for the construction ground improvement. The microbial polysaccharides are used as admixtures for cement. Microbially produced biodegradable bioplastics can be used for the temporarily constructions. The bioagents that are used in construction biotechnologies are either pure or enrichment cultures of microorganisms or activated indigenous microorganisms of soil. The applications of microorganisms in the construction processes are bioaggregation, biocementation, bioclogging, and biodesaturation of soil. The biotechnologically produced construction materials and the microbially-mediated construction technologies have a lot of advantages in comparison with the conventional construction materials and processes. Proper practical implementations of construction biotechnologies could give significant economic and environmental benefits.

  6. "Othering" agricultural biotechnology: Slovenian media representation of agricultural biotechnology.

    Science.gov (United States)

    Zajc, Jožica; Erjavec, Karmen

    2014-08-01

    While studies on media representations of agricultural biotechnology mostly analyse media texts, this work is intended to fill a research gap with an analysis of journalistic interpretations of media representations. The purpose of this project was to determine how news media represent agricultural biotechnology and how journalists interpret their own representations. A content and critical discourse analysis of news texts published in the Slovenian media over two years and in-depth interviews with their authors were conducted. News texts results suggest that most of the news posts were "othering" biotechnology and biotechnologists: biotechnology as a science and individual scientists are represented as "they," who are socially irresponsible, ignorant, arrogant, and "our" enemies who produce unnatural processes and work for biotechnology companies, whose greed is destroying people, animals, and the environment. Most journalists consider these representations to be objective because they have published the biotechnologists' opinions, despite their own negative attitudes towards biotechnology.

  7. Biotechnology worldwide and the 'European Biotechnology Thematic Network' Association (EBTNA).

    Science.gov (United States)

    Bruschi, F; Dundar, M; Gahan, P B; Gartland, K; Szente, M; Viola-Magni, M P; Akbarova, Y

    2011-09-01

    The European Biotechnology Congress 2011 held under the auspices of the European Biotechnology Thematic Network Association (EBTNA) in conjunction with the Turkish Medical Genetics Association brings together a broad spectrum of biotechnologists from around the world. The subsequent abstracts indicate the manner in which biotechnology has permeated all aspects of research from the basic sciences through to small and medium enterprises and major industries. The brief statements before the presentation of the abstracts aim to introduce not only Biotechnology in general and its importance around the world, but also the European Biotechnology Thematic Network Association and its aims especially within the framework of education and ethics in biotechnology. Copyright © 2011 Elsevier Ltd. All rights reserved.

  8. High energy nuclear database: a test-bed for nuclear data information technology

    International Nuclear Information System (INIS)

    Brown, D.A.; Vogt, R.; Beck, B.; Pruet, J.; Vogt, R.

    2008-01-01

    We describe the development of an on-line high-energy heavy-ion experimental database. When completed, the database will be searchable and cross-indexed with relevant publications, including published detector descriptions. While this effort is relatively new, it will eventually contain all published data from older heavy-ion programs as well as published data from current and future facilities. These data include all measured observables in proton-proton, proton-nucleus and nucleus-nucleus collisions. Once in general use, this database will have tremendous scientific payoff as it makes systematic studies easier and allows simpler benchmarking of theoretical models for a broad range of experiments. Furthermore, there is a growing need for compilations of high-energy nuclear data for applications including stockpile stewardship, technology development for inertial confinement fusion, target and source development for upcoming facilities such as the International Linear Collider and homeland security. This database is part of a larger proposal that includes the production of periodic data evaluations and topical reviews. These reviews would provide an alternative and impartial mechanism to resolve discrepancies between published data from rival experiments and between theory and experiment. Since this database will be a community resource, it requires the high-energy nuclear physics community's financial and manpower support. This project serves as a test-bed for the further development of an object-oriented nuclear data format and database system. By using 'off-the-shelf' software tools and techniques, the system is simple, robust, and extensible. Eventually we envision a 'Grand Unified Nuclear Format' encapsulating data types used in the ENSDF, Endf/B, EXFOR, NSR and other formats, including processed data formats. (authors)

  9. High Energy Nuclear Database: A Testbed for Nuclear Data Information Technology

    International Nuclear Information System (INIS)

    Brown, D A; Vogt, R; Beck, B; Pruet, J

    2007-01-01

    We describe the development of an on-line high-energy heavy-ion experimental database. When completed, the database will be searchable and cross-indexed with relevant publications, including published detector descriptions. While this effort is relatively new, it will eventually contain all published data from older heavy-ion programs as well as published data from current and future facilities. These data include all measured observables in proton-proton, proton-nucleus and nucleus-nucleus collisions. Once in general use, this database will have tremendous scientific payoff as it makes systematic studies easier and allows simpler benchmarking of theoretical models for a broad range of experiments. Furthermore, there is a growing need for compilations of high-energy nuclear data for applications including stockpile stewardship, technology development for inertial confinement fusion, target and source development for upcoming facilities such as the International Linear Collider and homeland security. This database is part of a larger proposal that includes the production of periodic data evaluations and topical reviews. These reviews would provide an alternative and impartial mechanism to resolve discrepancies between published data from rival experiments and between theory and experiment. Since this database will be a community resource, it requires the high-energy nuclear physics community's financial and manpower support. This project serves as a testbed for the further development of an object-oriented nuclear data format and database system. By using ''off-the-shelf'' software tools and techniques, the system is simple, robust, and extensible. Eventually we envision a ''Grand Unified Nuclear Format'' encapsulating data types used in the ENSDF, ENDF/B, EXFOR, NSR and other formats, including processed data formats

  10. Knowledge base technology for CT-DIMS: Report 1. [CT-DIMS (Cutting Tool - Database and Information Management System)

    Energy Technology Data Exchange (ETDEWEB)

    Kelley, E.E.

    1993-05-01

    This report discusses progress on the Cutting Tool-Database and Information Management System (CT-DIMS) project being conducted by the University of Illinois Urbana-Champaign (UIUC) under contract to the Department of Energy. This project was initiated in October 1991 by UIUC. The Knowledge-Based Engineering Systems Research Laboratory (KBESRL) at UIUC is developing knowledge base technology and prototype software for the presentation and manipulation of the cutting tool databases at Allied-Signal Inc., Kansas City Division (KCD). The graphical tool selection capability being developed for CT-DIMS in the Intelligent Design Environment for Engineering Automation (IDEEA) will provide a concurrent environment for simultaneous access to tool databases, tool standard libraries, and cutting tool knowledge.

  11. Wireless access to a pharmaceutical database: A demonstrator for data driven Wireless Application Prorocol (WAP) applications in medical information processing

    DEFF Research Database (Denmark)

    Hansen, Michael Schacht; Dørup, Jens

    2001-01-01

    script for easy update of the database. Data were distributed in 35 interrelated tables. Each pharmaceutical brand name was given its own card with links to general information about the drug, active substances, contraindications etc. Access was available through 1) browsing therapeutic groups and 2......) searching for a brand name. The database interface was programmed in the server-side scripting language PHP3. RESULTS: A free, open source Wireless Application Protocol gateway to a pharmaceutical catalogue was established to allow dial-in access independent of commercial Wireless Application Protocol...... service providers. The application was tested on the Nokia 7110 and Ericsson R320s cellular phones. CONCLUSIONS: We have demonstrated that Wireless Application Protocol-based access to a dynamic clinical database can be established using open source freeware. The project opens perspectives for a further...

  12. Biotechnology: reality or dream

    Directory of Open Access Journals (Sweden)

    Konstantinov Kosana

    2002-01-01

    Full Text Available The development of molecular biology and molecular genetics, especially of the recombinant DNA technology enabled improvement of experimental methods that provide manipulation within a cell-free system, such as cell and tissue cultures. Such methods resulted in the development of different new technologies with specific properties in relation to the conventional definitions. According to PERSLEY and lantin (2000 the following components are essential for the contemporary biotechnology: (i genomics - a molecular characterization of all genes and gene products of an organism (ii bioinformatics - the assembly of data from genomic analysis into accessible forms; (iii transformation - the introduction of genes controlling a trait of interest into a genome of a desired organism (micro organisms, plants, animal systems. By the application of cotemporary biotechnology new methods in the field of diagnostic are developed such as rapid and more accurate identification of the presence and absence of genes in the genome of the organism of interest (identification of pathogens prenatal diagnostics, molecular markers assisted breeding for plants, etc. The traits of an organism are determined by its genetic material, i.e. by a molecule of deoxyribonucleic acid (DNA. watson and crick (1953 were the first scientists to describe the structure of DNA as a double-stranded helix. Higher organisms contain a set of linear DNA molecules - chromosomes and a full set of chromosomes of an organism is a genome. Each genome is divided into a series of functional units, i.e. genes. The traits of an organism depend on genes, but their expression depends not only on genes but also on many other factors, including whether a gene, controlling the trait, expresses, specific cells in which it expresses and specially the mode by which the gene and its product interact with the environment. A special aspect within the application of biotechnology occurs as an interaction of a

  13. Biotechnology and Consumer Decision-Making.

    Science.gov (United States)

    Sax, Joanna K

    Society is facing major challenges in climate change, health care and overall quality of life. Scientific advances to address these areas continue to grow, with overwhelming evidence that the application of highly tested forms of biotechnology is safe and effective. Despite scientific consensus in these areas, consumers appear reluctant to support their use. Research that helps to understand consumer decision-making and the public’s resistance to biotechnologies such as vaccines, fluoridated water programs and genetically engineered food, will provide great social value. This article is forward-thinking in that it suggests that important research in behavioral decision-making, specifically affect and ambiguity, can be used to help consumers make informed choices about major applications of biotechnology. This article highlights some of the most controversial examples: vaccinations, genetically engineered food, rbST treated dairy cows, fluoridated water, and embryonic stem cell research. In many of these areas, consumers perceive the risks as high, but the experts calculate the risks as low. Four major thematic approaches are proposed to create a roadmap for policymakers to consider for policy design and implementation in controversial areas of biotechnology. This article articulates future directions for studies that implement decision-making research to allow consumers to appropriately assign risk to their options and make informed decisions.

  14. Recognizing biotechnology as a tool for sustainable development ...

    African Journals Online (AJOL)

    Knowledge of space science, information technology and biotechnology in ... It is indeed an essential panacea to the pervasive poverty and food security problem ... the nation and its citizens in such a way that the ecosystem is not threatened.

  15. Gulf-Wide Information System, Environmental Sensitivity Index National Heritage Program Database, Geographic NAD83, LDWF (2001) [esi_nhp_LDWF_2001

    Data.gov (United States)

    Louisiana Geographic Information Center — This data set contains sensitive biological resource data developed from the Louisiana National Heritage Program (NHP) database for coastal Louisiana. Vector...

  16. Properties and biotechnological applications of ice-binding proteins in bacteria.

    Science.gov (United States)

    Cid, Fernanda P; Rilling, Joaquín I; Graether, Steffen P; Bravo, Leon A; Mora, María de La Luz; Jorquera, Milko A

    2016-06-01

    Ice-binding proteins (IBPs), such as antifreeze proteins (AFPs) and ice-nucleating proteins (INPs), have been described in diverse cold-adapted organisms, and their potential applications in biotechnology have been recognized in various fields. Currently, both IBPs are being applied to biotechnological processes, primarily in medicine and the food industry. However, our knowledge regarding the diversity of bacterial IBPs is limited; few studies have purified and characterized AFPs and INPs from bacteria. Phenotypically verified IBPs have been described in members belonging to Gammaproteobacteria, Actinobacteria and Flavobacteriia classes, whereas putative IBPs have been found in Gammaproteobacteria, Alphaproteobacteria and Bacilli classes. Thus, the main goal of this minireview is to summarize the current information on bacterial IBPs and their application in biotechnology, emphasizing the potential application in less explored fields such as agriculture. Investigations have suggested the use of INP-producing bacteria antagonists and AFPs-producing bacteria (or their AFPs) as a very attractive strategy to prevent frost damages in crops. UniProt database analyses of reported IBPs (phenotypically verified) and putative IBPs also show the limited information available on bacterial IBPs and indicate that major studies are required. © FEMS 2016. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

  17. Term Relevance Feedback and Mediated Database Searching: Implications for Information Retrieval Practice and Systems Design.

    Science.gov (United States)

    Spink, Amanda

    1995-01-01

    This study uses the human approach to examine the sources and effectiveness of search terms selected during 40 mediated interactive database searches and focuses on determining the retrieval effectiveness of search terms identified by users and intermediaries from retrieved items during term relevance feedback. (Author/JKP)

  18. Biotechnology and bioforensics new trends

    CERN Document Server

    Kumar, Amit

    2015-01-01

    This Brief covers broad areas of Applied Biology specifically into the domains of Biotechnology/Biomedicine and Forensic Science. Chapters included here would also explain the role of bioinformatics in protein and gene characterization, modeling of the protein structure, survey related to the chromosomal effect on Human Disorders like Diabetes and Cardiac Problems. This Brief is full of Innovative Literature like Use of Microbes in Electricity Production, Brain connection to Type 2 Diabetes etc. Interesting issues in Forensic biology and the aspects of Bioforensics like STR profiling of exhumed bones makes this brief truly useful and informative for Researchers. It also includes the advancements and new ideologies in understanding crop improvements & crop quality. This Brief witnesses Innovative Research related to the Bio and Agri software development too which are capable of accelerating Insilico biological data analysis.

  19. Design and implementation of an enterprise information system utilizing a component based three-tier client/server database system

    OpenAIRE

    Akbay, Murat.; Lewis, Steven C.

    1999-01-01

    The Naval Security Group currently requires a modem architecture to merge existing command databases into a single Enterprise Information System through which each command may manipulate administrative data. There are numerous technologies available to build and implement such a system. Component- based architectures are extremely well-suited for creating scalable and flexible three-tier Client/Server systems because the data and business logic are encapsulated within objects, allowing them t...

  20. Plant rDNA database: ribosomal DNA loci information goes online

    Czech Academy of Sciences Publication Activity Database

    Garcia, S.; Garnatje, T.; Kovařík, Aleš

    2012-01-01

    Roč. 121, č. 4 (2012), s. 389-394 ISSN 0009-5915 R&D Projects: GA ČR(CZ) GAP501/10/0208; GA ČR GBP501/12/G090 Institutional research plan: CEZ:AV0Z50040702 Keywords : rDNA loci * FISH * database Subject RIV: BO - Biophysics Impact factor: 3.340, year: 2012

  1. Magnetic separations in biotechnology.

    Science.gov (United States)

    Borlido, L; Azevedo, A M; Roque, A C A; Aires-Barros, M R

    2013-12-01

    Magnetic separations are probably one of the most versatile separation processes in biotechnology as they are able to purify cells, viruses, proteins and nucleic acids directly from crude samples. The fast and gentle process in combination with its easy scale-up and automation provide unique advantages over other separation techniques. In the midst of this process are the magnetic adsorbents tailored for the envisioned target and whose complex synthesis spans over multiple fields of science. In this context, this article reviews both the synthesis and tailoring of magnetic adsorbents for bioseparations as well as their ultimate application. Copyright © 2013 Elsevier Inc. All rights reserved.

  2. Industrial use of Biotechnology in Agriculture

    International Nuclear Information System (INIS)

    But, S.J.

    2006-01-01

    In the past the biological research was restricted within the boundary of laboratories and the subsequent results were often employed merely to strengthen the research knowledge and information. In life sciences, the traditional methods took years in proving the biological facts. At the leg of last century, the practical application of biotechnology provided a powerful tool to mankind that has led to a revolutionary change in modern agriculture. In the present era, the economy of agro-based countries all over the world is dependent on the adaptation of the pattern of crop-production and their improvement through modern biotechnological means. Biotechnology is in fact the name of a combination of techniques involved to make the full use of living organisms, either in total or in part, for the benefit of plants, animals or human beings. Progressive and dynamic investors, associated with researches/scientists, should be encouraged to step forward for the mobilization of emerging trend of biotechnological industry in agriculture. Researcher/Scientists of biological programmes in Pakistan should be encouraged at Government level to come forward in contributing their tremendous role to boost Agr- industry in the country. (author)

  3. Database Description - PSCDB | LSDB Archive [Life Science Database Archive metadata

    Lifescience Database Archive (English)

    Full Text Available abase Description General information of database Database name PSCDB Alternative n...rial Science and Technology (AIST) Takayuki Amemiya E-mail: Database classification Structure Databases - Protein structure Database...554-D558. External Links: Original website information Database maintenance site Graduate School of Informat...available URL of Web services - Need for user registration Not available About This Database Database Descri...ption Download License Update History of This Database Site Policy | Contact Us Database Description - PSCDB | LSDB Archive ...

  4. 2DB: a Proteomics database for storage, analysis, presentation, and retrieval of information from mass spectrometric experiments.

    Science.gov (United States)

    Allmer, Jens; Kuhlgert, Sebastian; Hippler, Michael

    2008-07-07

    The amount of information stemming from proteomics experiments involving (multi dimensional) separation techniques, mass spectrometric analysis, and computational analysis is ever-increasing. Data from such an experimental workflow needs to be captured, related and analyzed. Biological experiments within this scope produce heterogenic data ranging from pictures of one or two-dimensional protein maps and spectra recorded by tandem mass spectrometry to text-based identifications made by algorithms which analyze these spectra. Additionally, peptide and corresponding protein information needs to be displayed. In order to handle the large amount of data from computational processing of mass spectrometric experiments, automatic import scripts are available and the necessity for manual input to the database has been minimized. Information is in a generic format which abstracts from specific software tools typically used in such an experimental workflow. The software is therefore capable of storing and cross analysing results from many algorithms. A novel feature and a focus of this database is to facilitate protein identification by using peptides identified from mass spectrometry and link this information directly to respective protein maps. Additionally, our application employs spectral counting for quantitative presentation of the data. All information can be linked to hot spots on images to place the results into an experimental context. A summary of identified proteins, containing all relevant information per hot spot, is automatically generated, usually upon either a change in the underlying protein models or due to newly imported identifications. The supporting information for this report can be accessed in multiple ways using the user interface provided by the application. We present a proteomics database which aims to greatly reduce evaluation time of results from mass spectrometric experiments and enhance result quality by allowing consistent data handling

  5. 2DB: a Proteomics database for storage, analysis, presentation, and retrieval of information from mass spectrometric experiments

    Directory of Open Access Journals (Sweden)

    Hippler Michael

    2008-07-01

    Full Text Available Abstract Background The amount of information stemming from proteomics experiments involving (multi dimensional separation techniques, mass spectrometric analysis, and computational analysis is ever-increasing. Data from such an experimental workflow needs to be captured, related and analyzed. Biological experiments within this scope produce heterogenic data ranging from pictures of one or two-dimensional protein maps and spectra recorded by tandem mass spectrometry to text-based identifications made by algorithms which analyze these spectra. Additionally, peptide and corresponding protein information needs to be displayed. Results In order to handle the large amount of data from computational processing of mass spectrometric experiments, automatic import scripts are available and the necessity for manual input to the database has been minimized. Information is in a generic format which abstracts from specific software tools typically used in such an experimental workflow. The software is therefore capable of storing and cross analysing results from many algorithms. A novel feature and a focus of this database is to facilitate protein identification by using peptides identified from mass spectrometry and link this information directly to respective protein maps. Additionally, our application employs spectral counting for quantitative presentation of the data. All information can be linked to hot spots on images to place the results into an experimental context. A summary of identified proteins, containing all relevant information per hot spot, is automatically generated, usually upon either a change in the underlying protein models or due to newly imported identifications. The supporting information for this report can be accessed in multiple ways using the user interface provided by the application. Conclusion We present a proteomics database which aims to greatly reduce evaluation time of results from mass spectrometric experiments and enhance

  6. 76 FR 54807 - Notice of Proposed Information Collection: IMLS Museum Web Database: MuseumsCount.gov

    Science.gov (United States)

    2011-09-02

    ... data for strategic decision-making. A copy of the proposed information collection request can be... and assumptions used; Enhance the quality, utility, and clarity of the information to be collected... NATIONAL FOUNDATION FOR THE ARTS AND THE HUMANITIES Notice of Proposed Information Collection...

  7. USAID Anticorruption Projects Database

    Data.gov (United States)

    US Agency for International Development — The Anticorruption Projects Database (Database) includes information about USAID projects with anticorruption interventions implemented worldwide between 2007 and...

  8. Biotechnology Towards Energy Crops.

    Science.gov (United States)

    Margaritopoulou, Theoni; Roka, Loukia; Alexopoulou, Efi; Christou, Myrsini; Rigas, Stamatis; Haralampidis, Kosmas; Milioni, Dimitra

    2016-03-01

    New crops are gradually establishing along with cultivation systems to reduce reliance on depleting fossil fuel reserves and sustain better adaptation to climate change. These biological assets could be efficiently exploited as bioenergy feedstocks. Bioenergy crops are versatile renewable sources with the potential to alternatively contribute on a daily basis towards the coverage of modern society's energy demands. Biotechnology may facilitate the breeding of elite energy crop genotypes, better suited for bio-processing and subsequent use that will improve efficiency, further reduce costs, and enhance the environmental benefits of biofuels. Innovative molecular techniques may improve a broad range of important features including biomass yield, product quality and resistance to biotic factors like pests or microbial diseases or environmental cues such as drought, salinity, freezing injury or heat shock. The current review intends to assess the capacity of biotechnological applications to develop a beneficial bioenergy pipeline extending from feedstock development to sustainable biofuel production and provide examples of the current state of the art on future energy crops.

  9. KID - an algorithm for fast and efficient text mining used to automatically generate a database containing kinetic information of enzymes

    Directory of Open Access Journals (Sweden)

    Schomburg Dietmar

    2010-07-01

    Full Text Available Abstract Background The amount of available biological information is rapidly increasing and the focus of biological research has moved from single components to networks and even larger projects aiming at the analysis, modelling and simulation of biological networks as well as large scale comparison of cellular properties. It is therefore essential that biological knowledge is easily accessible. However, most information is contained in the written literature in an unstructured way, so that methods for the systematic extraction of knowledge directly from the primary literature have to be deployed. Description Here we present a text mining algorithm for the extraction of kinetic information such as KM, Ki, kcat etc. as well as associated information such as enzyme names, EC numbers, ligands, organisms, localisations, pH and temperatures. Using this rule- and dictionary-based approach, it was possible to extract 514,394 kinetic parameters of 13 categories (KM, Ki, kcat, kcat/KM, Vmax, IC50, S0.5, Kd, Ka, t1/2, pI, nH, specific activity, Vmax/KM from about 17 million PubMed abstracts and combine them with other data in the abstract. A manual verification of approx. 1,000 randomly chosen results yielded a recall between 51% and 84% and a precision ranging from 55% to 96%, depending of the category searched. The results were stored in a database and are available as "KID the KInetic Database" via the internet. Conclusions The presented algorithm delivers a considerable amount of information and therefore may aid to accelerate the research and the automated analysis required for today's systems biology approaches. The database obtained by analysing PubMed abstracts may be a valuable help in the field of chemical and biological kinetics. It is completely based upon text mining and therefore complements manually curated databases. The database is available at http://kid.tu-bs.de. The source code of the algorithm is provided under the GNU General Public

  10. A national look at carbon capture and storage-National carbon sequestration database and geographical information system (NatCarb)

    Science.gov (United States)

    Carr, T.R.; Iqbal, A.; Callaghan, N.; ,; Look, K.; Saving, S.; Nelson, K.

    2009-01-01

    The US Department of Energy's Regional Carbon Sequestration Partnerships (RCSPs) are responsible for generating geospatial data for the maps displayed in the Carbon Sequestration Atlas of the United States and Canada. Key geospatial data (carbon sources, potential storage sites, transportation, land use, etc.) are required for the Atlas, and for efficient implementation of carbon sequestration on a national and regional scale. The National Carbon Sequestration Database and Geographical Information System (NatCarb) is a relational database and geographic information system (GIS) that integrates carbon storage data generated and maintained by the RCSPs and various other sources. The purpose of NatCarb is to provide a national view of the carbon capture and storage potential in the U.S. and Canada. The digital spatial database allows users to estimate the amount of CO2 emitted by sources (such as power plants, refineries and other fossil-fuel-consuming industries) in relation to geologic formations that can provide safe, secure storage sites over long periods of time. The NatCarb project is working to provide all stakeholders with improved online tools for the display and analysis of CO2 carbon capture and storage data. NatCarb is organizing and enhancing the critical information about CO2 sources and developing the technology needed to access, query, model, analyze, display, and distribute natural resource data related to carbon management. Data are generated, maintained and enhanced locally at the RCSP level, or at specialized data warehouses, and assembled, accessed, and analyzed in real-time through a single geoportal. NatCarb is a functional demonstration of distributed data-management systems that cross the boundaries between institutions and geographic areas. It forms the first step toward a functioning National Carbon Cyberinfrastructure (NCCI). NatCarb provides access to first-order information to evaluate the costs, economic potential and societal issues of

  11. AT_CHLORO, a comprehensive chloroplast proteome database with subplastidial localization and curated information on envelope proteins.

    Science.gov (United States)

    Ferro, Myriam; Brugière, Sabine; Salvi, Daniel; Seigneurin-Berny, Daphné; Court, Magali; Moyet, Lucas; Ramus, Claire; Miras, Stéphane; Mellal, Mourad; Le Gall, Sophie; Kieffer-Jaquinod, Sylvie; Bruley, Christophe; Garin, Jérôme; Joyard, Jacques; Masselon, Christophe; Rolland, Norbert

    2010-06-01

    Recent advances in the proteomics field have allowed a series of high throughput experiments to be conducted on chloroplast samples, and the data are available in several public databases. However, the accurate localization of many chloroplast proteins often remains hypothetical. This is especially true for envelope proteins. We went a step further into the knowledge of the chloroplast proteome by focusing, in the same set of experiments, on the localization of proteins in the stroma, the thylakoids, and envelope membranes. LC-MS/MS-based analyses first allowed building the AT_CHLORO database (http://www.grenoble.prabi.fr/protehome/grenoble-plant-proteomics/), a comprehensive repertoire of the 1323 proteins, identified by 10,654 unique peptide sequences, present in highly purified chloroplasts and their subfractions prepared from Arabidopsis thaliana leaves. This database also provides extensive proteomics information (peptide sequences and molecular weight, chromatographic retention times, MS/MS spectra, and spectral count) for a unique chloroplast protein accurate mass and time tag database gathering identified peptides with their respective and precise analytical coordinates, molecular weight, and retention time. We assessed the partitioning of each protein in the three chloroplast compartments by using a semiquantitative proteomics approach (spectral count). These data together with an in-depth investigation of the literature were compiled to provide accurate subplastidial localization of previously known and newly identified proteins. A unique knowledge base containing extensive information on the proteins identified in envelope fractions was thus obtained, allowing new insights into this membrane system to be revealed. Altogether, the data we obtained provide unexpected information about plastidial or subplastidial localization of some proteins that were not suspected to be associated to this membrane system. The spectral counting-based strategy was further

  12. Knowledge and Attitudes Towards Biotechnology of Elementary Education Preservice Teachers: The first Spanish experience

    Science.gov (United States)

    Casanoves, Marina; González, Ángel; Salvadó, Zoel; Haro, Juan; Novo, Maite

    2015-11-01

    Due to the important impact that biotechnology has on current Western societies, well-informed critical citizens are needed. People prepared to make conscious decisions about aspects of biotechnology that relate to their own lives. Teachers play a central role in all education systems. Thus, the biotechnological literacy of preservice teachers is an important consideration as they will become an influential collective as future teachers of the next generation of children. The attitudes toward science (and biotechnology) that teachers have affect their behavior and influence the way they implement their daily practice of science teaching in school. This study analyzes the attitudes and knowledge of Spanish preservice teachers toward biotechnology. We designed a new survey instrument that was completed by 407 university students who were taking official degree programs in preschool and primary education. Our results point out that although they are aware of biotechnology applications, topics concerning the structure of DNA, management of genetic information inside the cell, genetically modified organism technology and the use of microorganisms as biotechnological tools were not correctly answered. According to our attitude analysis, Spanish preservice teachers could be defined as opponents of genetically modified product acquisition, supporters of biotechnology for medical purposes and highly interested in increasing their knowledge about biotechnology and other scientific advances. Our results show a positive correlation between better knowledge and more positive attitudes toward biotechnology. A Spanish preservice teacher with positive attitudes toward biotechnology tends to be a student with a strong biology background who scored good marks in our knowledge test.

  13. Ethical perception of modern biotechnology

    African Journals Online (AJOL)

    Jane

    2011-09-30

    Sep 30, 2011 ... 1Social Impact of Biotechnology Development in Malaysia Research ... purpose of this paper is to examine the ethical perception of modern ... and social benefits of modern biotechnology, consumer .... Company or organisation directly involved in the production of ...... Food safety battle: organic vs. biotech.

  14. Teachers' Concerns about Biotechnology Education

    Science.gov (United States)

    Borgerding, Lisa A.; Sadler, Troy D.; Koroly, Mary Jo

    2013-01-01

    The impacts of biotechnology are found in nearly all sectors of society from health care and food products to environmental issues and energy sources. Despite the significance of biotechnology within the sciences, it has not become a prominent trend in science education. In this study, we seek to more fully identify biology teachers' concerns…

  15. Environmental biotechnology: concepts and applications

    National Research Council Canada - National Science Library

    Winter, Josef; Jördening, Hans-Joachim

    2005-01-01

    ... for the - development of new and environmentally improved production technologies with less purified substrates and generation of fewer by-products - bioproducts as non-toxic matters, mostly recyclable. Some impressive studies on industrial applications of biotechnology are published in two OECD reports, which summarized, that biotechnology has the potential o...

  16. Ethical limitations in patenting biotechnological inventions.

    Science.gov (United States)

    Lugagnani, V

    1999-01-01

    In order to connect ethical considerations with practical limits to patentability, the moral judgement should possibly move from the exploitation of the invention to the nature and/or objectives of Research and Development (R&D) projects which have produced it: in other words, it appears quite reasonable and logical that Society is not rewarding unethical R&D activities by granting intellectual property rights. As far as biotechnology R&D is concerned, ethical guidance can be derived from the 1996 Council of EuropeOs OConvention for the protection of human rights and dignity of the human being with regard to the application of biology and medicineO, whose Chapter V - Scientific research - provides guidelines on: i. protection of persons undergoing research (e.g. informed consent); ii. protection of persons not able to consent to research; iii. research on embryos in vitro. As far as the specific point of patenting biotechnology inventions is concerned, the four exclusions prescribed by Directive 98/44/EC (i.e. human cloning, human germ-line gene therapy, use of human embryos for commercial purposes, unjustified animal suffering for medical purposes) are all we have in Europe in terms of ethical guidance to patentability. In Italy, in particular, we certainly need far more comprehensive legislation, expressing SocietyOs demand to provide ethical control of modern biotechnology. However it is quite difficult to claim that ethical concerns are being raised by currently awarded biotechnology patents related to living organisms and material thereof; they largely deal with the results of genomic R&D, purposely and usefully oriented toward improving health-care and agri-food processes, products and services. ONo patents on lifeOO can be an appealing slogan of militants against modern biotechnology, but it is far too much of an over-simplified abstraction to become the Eleventh Commandment our Society.

  17. [Research and development of medical case database: a novel medical case information system integrating with biospecimen management].

    Science.gov (United States)

    Pan, Shiyang; Mu, Yuan; Wang, Hong; Wang, Tong; Huang, Peijun; Ma, Jianfeng; Jiang, Li; Zhang, Jie; Gu, Bing; Yi, Lujiang

    2010-04-01

    To meet the needs of management of medical case information and biospecimen simultaneously, we developed a novel medical case information system integrating with biospecimen management. The database established by MS SQL Server 2000 covered, basic information, clinical diagnosis, imaging diagnosis, pathological diagnosis and clinical treatment of patient; physicochemical property, inventory management and laboratory analysis of biospecimen; users log and data maintenance. The client application developed by Visual C++ 6.0 was used to implement medical case and biospecimen management, which was based on Client/Server model. This system can perform input, browse, inquest, summary of case and related biospecimen information, and can automatically synthesize case-records based on the database. Management of not only a long-term follow-up on individual, but also of grouped cases organized according to the aim of research can be achieved by the system. This system can improve the efficiency and quality of clinical researches while biospecimens are used coordinately. It realizes synthesized and dynamic management of medical case and biospecimen, which may be considered as a new management platform.

  18. Information Retrieval Strategies of Millennial Undergraduate Students in Web and Library Database Searches

    Science.gov (United States)

    Porter, Brandi

    2009-01-01

    Millennial students make up a large portion of undergraduate students attending colleges and universities, and they have a variety of online resources available to them to complete academically related information searches, primarily Web based and library-based online information retrieval systems. The content, ease of use, and required search…

  19. Using Patent Classification to Discover Chemical Information in a Free Patent Database: Challenges and Opportunities

    Science.gov (United States)

    Ha¨rtinger, Stefan; Clarke, Nigel

    2016-01-01

    Developing skills for searching the patent literature is an essential element of chemical information literacy programs at the university level. The present article creates awareness of patents as a rich source of chemical information. Patent classification is introduced as a key-component in comprehensive search strategies. The free Espacenet…

  20. Integrating information systems : linking global business goals to local database applications

    NARCIS (Netherlands)

    Dignum, F.P.M.; Houben, G.J.P.M.

    1999-01-01

    This paper describes a new approach to design modern information systems that offer an integrated access to the data and knowledge that is available in local applications. By integrating the local data management activities into one transparent information distribution process, modern organizations

  1. A new era for specimen databases and biodiversity information management in South Africa

    Directory of Open Access Journals (Sweden)

    Willem Coetzer

    2012-06-01

    Full Text Available We comment on the inherited legacy, current state of, and future direction of the management of biodiversity information in natural history museums in South Africa. We emphasise the importance of training and capacity development to improve the quality and integration of biodiversity information for research.

  2. Federated Search Tools in Fusion Centers: Bridging Databases in the Information Sharing Environment

    Science.gov (United States)

    2012-09-01

    Suspicious Activity Reporting Initiative ODNI Office of the Director of National Intelligence OSINT Open Source Intelligence PERF Police Executive...Fusion centers are encouraged to explore all available information sources to enhance the intelligence analysis process. It follows then that fusion...WSIC also utilizes ACCURINT, a web-based, subscription service. ACCURINT searches open source information and is able to collect and collate

  3. Energy Consumption Database

    Science.gov (United States)

    Consumption Database The California Energy Commission has created this on-line database for informal reporting ) classifications. The database also provides easy downloading of energy consumption data into Microsoft Excel (XLSX

  4. Performance Improvement with Web Based Database on Library Information System of Smk Yadika 5

    Directory of Open Access Journals (Sweden)

    Pualam Dipa Nusantara

    2015-12-01

    Full Text Available The difficulty in managing the data of books collection in the library is a problem that is often faced by the librarian that effect the quality of service. Arrangement and recording a collection of books in the file system of separate applications Word and Excel, as well as transaction handling borrowing and returning books, therehas been no integrated records. Library system can manage the book collection. This system can reduce the problems often experienced by library staff when serving students in borrowing books. There so frequent difficulty in managing the books that still in borrowed state. This system will also record a collection of late fees or lost library conducted by students (borrowers. The conclusion of this study is library performance can be better with the library system using web database.

  5. Ethics in biotechnology and biosecurity

    Directory of Open Access Journals (Sweden)

    S Jameel

    2011-01-01

    Full Text Available Great advances in technology produce unique challenges. Every technology also has a dual use, which needs to be understood and managed to extract maximum benefits for mankind and the development of civilization. The achievements of physicists in the mid-20th century resulted in the nuclear technology, which gave us the destructive power of the atomic bomb as also a source of energy. Towards the later part of the 20th century, information technology empowered us with fast, easy and cheap access to information, but also led to intrusions into our privacy. Today, biotechnology is yielding life- saving and life-enhancing advances at a fast pace. But, the same tools can also give rise to fiercely destructive forces. How do we construct a security regime for biology? What have we learnt from the management of earlier technological advances? How much information should be in the public domain? Should biology, or more broadly science, be regulated? Who should regulate it? These and many other ethical questions need to be addressed.

  6. Ethics in biotechnology and biosecurity.

    Science.gov (United States)

    Jameel, S

    2011-01-01

    Great advances in technology produce unique challenges. Every technology also has a dual use, which needs to be understood and managed to extract maximum benefits for mankind and the development of civilization. The achievements of physicists in the mid-20th century resulted in the nuclear technology, which gave us the destructive power of the atomic bomb as also a source of energy. Towards the later part of the 20th century, information technology empowered us with fast, easy and cheap access to information, but also led to intrusions into our privacy. Today, biotechnology is yielding life- saving and life-enhancing advances at a fast pace. But, the same tools can also give rise to fiercely destructive forces. How do we construct a security regime for biology? What have we learnt from the management of earlier technological advances? How much information should be in the public domain? Should biology, or more broadly science, be regulated? Who should regulate it? These and many other ethical questions need to be addressed.

  7. Microalgal symbiosis in biotechnology.

    Science.gov (United States)

    Santos, Carla A; Reis, Alberto

    2014-07-01

    This review provides an analysis of recent published work on interactions between microorganisms, especially the ones involving mainly nutrient exchanges and at least with one microalga species. Examples of microbial partners are given, with a remark to the potential application of cultures of an autotroph and a heterotroph, which grow simultaneously, taking advantage of the complementary metabolisms. These are particularly interesting, either due to economic or sustainable aspects, and some applications have already reached the commercial stage of development. The added advantages of these symbiotic cultures are biomass, lipid, and other products productivity enhancement a better utilization of resources and the reduction or even elimination of process residues (including carbon dioxide and other greenhouse gases) to conduct an increasingly greener biotechnology. Among the several symbiotic partners referred, the microalgae and yeast cultures are the most used. The interaction between these two microorganisms shows how to enhance the lipid production for biodiesel purposes compared with separated (stand-alone) cultures.

  8. How can developing countries harness biotechnology to improve health?

    Directory of Open Access Journals (Sweden)

    Persad Deepa L

    2007-12-01

    Full Text Available Abstract Background The benefits of genomics and biotechnology are concentrated primarily in the industrialized world, while their potential to combat neglected diseases in the developing world has been largely untapped. Without building developing world biotechnology capacity to address local health needs, this disparity will only intensify. To assess the potential of genomics to address health needs in the developing world, the McLaughlin-Rotman Centre for Global Health, along with local partners, organized five courses on Genomics and Public Health Policy in the developing world. The overall objective of the courses was to collectively explore how to best harness genomics to improve health in each region. This article presents and analyzes the recommendations from all five courses. Discussion In this paper we analyze recommendations from 232 developing world experts from 58 countries who sought to answer how best to harness biotechnology to improve health in their regions. We divide their recommendations into four categories: science; finance; ethics, society and culture; and politics. Summary The Courses' recommendations can be summarized across the four categories listed above: Science - Collaborate through national, regional, and international networks - Survey and build capacity based on proven models through education, training, and needs assessments Finance - Develop regulatory and intellectual property frameworks for commercialization of biotechnology - Enhance funding and affordability of biotechnology - Improve the academic-industry interface and the role of small and medium enterprise Ethics, Society, Culture - Develop public engagement strategies to inform and educate the public about developments in genomics and biotechnology - Develop capacity to address ethical, social and cultural issues - Improve accessibility and equity Politics - Strengthen understanding, leadership and support at the political level for biotechnology

  9. Development of an Information Database for the Integrated Airline Management System (IAMS

    Directory of Open Access Journals (Sweden)

    Bogdane Ruta

    2017-08-01

    Full Text Available In present conditions the activity of any enterprise is represented as a combination of operational processes. Each of them corresponds to relevant airline management systems. Combining two or more management systems, it is possible to obtain an integrated management system. For the effective functioning of the integrated management system, an appropriate information system should be developed. This article proposes a model of such an information system.

  10. Database Description - RPD | LSDB Archive [Life Science Database Archive metadata

    Lifescience Database Archive (English)

    Full Text Available ase Description General information of database Database name RPD Alternative name Rice Proteome Database...titute of Crop Science, National Agriculture and Food Research Organization Setsuko Komatsu E-mail: Database... classification Proteomics Resources Plant databases - Rice Organism Taxonomy Name: Oryza sativa Taxonomy ID: 4530 Database... description Rice Proteome Database contains information on protei...and entered in the Rice Proteome Database. The database is searchable by keyword,

  11. Database Description - JSNP | LSDB Archive [Life Science Database Archive metadata

    Lifescience Database Archive (English)

    Full Text Available base Description General information of database Database name JSNP Alternative nam...n Science and Technology Agency Creator Affiliation: Contact address E-mail : Database...sapiens Taxonomy ID: 9606 Database description A database of about 197,000 polymorphisms in Japanese populat...1):605-610 External Links: Original website information Database maintenance site Institute of Medical Scien...er registration Not available About This Database Database Description Download License Update History of This Database

  12. Database Description - ASTRA | LSDB Archive [Life Science Database Archive metadata

    Lifescience Database Archive (English)

    Full Text Available abase Description General information of database Database name ASTRA Alternative n...tics Journal Search: Contact address Database classification Nucleotide Sequence Databases - Gene structure,...3702 Taxonomy Name: Oryza sativa Taxonomy ID: 4530 Database description The database represents classified p...(10):1211-6. External Links: Original website information Database maintenance site National Institute of Ad... for user registration Not available About This Database Database Description Dow

  13. Database Description - RED | LSDB Archive [Life Science Database Archive metadata

    Lifescience Database Archive (English)

    Full Text Available ase Description General information of database Database name RED Alternative name Rice Expression Database...enome Research Unit Shoshi Kikuchi E-mail : Database classification Plant databases - Rice Database classifi...cation Microarray, Gene Expression Organism Taxonomy Name: Oryza sativa Taxonomy ID: 4530 Database descripti... Article title: Rice Expression Database: the gateway to rice functional genomics...nt Science (2002) Dec 7 (12):563-564 External Links: Original website information Database maintenance site

  14. Database Description - PLACE | LSDB Archive [Life Science Database Archive metadata

    Lifescience Database Archive (English)

    Full Text Available abase Description General information of database Database name PLACE Alternative name A Database...Kannondai, Tsukuba, Ibaraki 305-8602, Japan National Institute of Agrobiological Sciences E-mail : Databas...e classification Plant databases Organism Taxonomy Name: Tracheophyta Taxonomy ID: 58023 Database...99, Vol.27, No.1 :297-300 External Links: Original website information Database maintenance site National In...- Need for user registration Not available About This Database Database Descripti

  15. Formulating informative, data-based priors for failure probability estimation in reliability analysis

    International Nuclear Information System (INIS)

    Guikema, Seth D.

    2007-01-01

    Priors play an important role in the use of Bayesian methods in risk analysis, and using all available information to formulate an informative prior can lead to more accurate posterior inferences. This paper examines the practical implications of using five different methods for formulating an informative prior for a failure probability based on past data. These methods are the method of moments, maximum likelihood (ML) estimation, maximum entropy estimation, starting from a non-informative 'pre-prior', and fitting a prior based on confidence/credible interval matching. The priors resulting from the use of these different methods are compared qualitatively, and the posteriors are compared quantitatively based on a number of different scenarios of observed data used to update the priors. The results show that the amount of information assumed in the prior makes a critical difference in the accuracy of the posterior inferences. For situations in which the data used to formulate the informative prior is an accurate reflection of the data that is later observed, the ML approach yields the minimum variance posterior. However, the maximum entropy approach is more robust to differences between the data used to formulate the prior and the observed data because it maximizes the uncertainty in the prior subject to the constraints imposed by the past data

  16. Use of diagnostic information submitted to the United Kingdom Central Cardiac Audit Database: development of categorisation and allocation algorithms.

    Science.gov (United States)

    Brown, Kate L; Crowe, Sonya; Pagel, Christina; Bull, Catherine; Muthialu, Nagarajan; Gibbs, John; Cunningham, David; Utley, Martin; Tsang, Victor T; Franklin, Rodney

    2013-08-01

    To categorise records according to primary cardiac diagnosis in the United Kingdom Central Cardiac Audit Database in order to add this information to a risk adjustment model for paediatric cardiac surgery. Codes from the International Paediatric Congenital Cardiac Code were mapped to recognisable primary cardiac diagnosis groupings, allocated using a hierarchy and less refined diagnosis groups, based on the number of functional ventricles and presence of aortic obstruction. A National Clinical Audit Database. Patients Children undergoing cardiac interventions: the proportions for each diagnosis scheme are presented for 13,551 first patient surgical episodes since 2004. In Scheme 1, the most prevalent diagnoses nationally were ventricular septal defect (13%), patent ductus arteriosus (10.4%), and tetralogy of Fallot (9.5%). In Scheme 2, the prevalence of a biventricular heart without aortic obstruction was 64.2% and with aortic obstruction was 14.1%; the prevalence of a functionally univentricular heart without aortic obstruction was 4.3% and with aortic obstruction was 4.7%; the prevalence of unknown (ambiguous) number of ventricles was 8.4%; and the prevalence of acquired heart disease only was 2.2%. Diagnostic groups added to procedural information: of the 17% of all operations classed as "not a specific procedure", 97.1% had a diagnosis identified in Scheme 1 and 97.2% in Scheme 2. Diagnostic information adds to surgical procedural data when the complexity of case mix is analysed in a national database. These diagnostic categorisation schemes may be used for future investigation of the frequency of conditions and evaluation of long-term outcome over a series of procedures.

  17. Djeen (Database for Joomla!'s Extensible Engine): a research information management system for flexible multi-technology project administration.

    Science.gov (United States)

    Stahl, Olivier; Duvergey, Hugo; Guille, Arnaud; Blondin, Fanny; Vecchio, Alexandre Del; Finetti, Pascal; Granjeaud, Samuel; Vigy, Oana; Bidaut, Ghislain

    2013-06-06

    With the advance of post-genomic technologies, the need for tools to manage large scale data in biology becomes more pressing. This involves annotating and storing data securely, as well as granting permissions flexibly with several technologies (all array types, flow cytometry, proteomics) for collaborative work and data sharing. This task is not easily achieved with most systems available today. We developed Djeen (Database for Joomla!'s Extensible Engine), a new Research Information Management System (RIMS) for collaborative projects. Djeen is a user-friendly application, designed to streamline data storage and annotation collaboratively. Its database model, kept simple, is compliant with most technologies and allows storing and managing of heterogeneous data with the same system. Advanced permissions are managed through different roles. Templates allow Minimum Information (MI) compliance. Djeen allows managing project associated with heterogeneous data types while enforcing annotation integrity and minimum information. Projects are managed within a hierarchy and user permissions are finely-grained for each project, user and group.Djeen Component source code (version 1.5.1) and installation documentation are available under CeCILL license from http://sourceforge.net/projects/djeen/files and supplementary material.

  18. Perspectives of Australian adults about protecting the privacy of their health information in statistical databases.

    Science.gov (United States)

    King, Tatiana; Brankovic, Ljiljana; Gillard, Patricia

    2012-04-01

    The aim of this study was to discover the public's attitude and views towards privacy in health care. This is a part of a larger project which aims to gain an insight into what kind of privacy is needed and develop technical measures to provide such privacy. The study was a two-stage process which combined qualitative and quantitative research. Stage One of the study comprised arranging and facilitating focus groups while in Stage Two we conducted a social survey. We measured attitudes towards privacy, medical research and consent; privacy concern about sharing one's health information for research; privacy concern about the possibility that some specific information from medical records could be linked to the patient's name in a situation that was not related to medical treatment. The results of the study revealed both great support for medical research (98%), and concern about privacy of health information (66%). Participants prefer to be asked for their permission before their health information is used for any purpose other than medical treatment (92%), and they would like to know the organisation and details of the research before allowing the use of their health records (83%). Age, level of education, place of birth and employment status are most strongly associated with privacy concerns. The study showed that there are some particularly sensitive issues and there is a concern (42-60%) about any possibility of linking these kinds of data to the patient's name in a situation that is not related to medical treatment. Such issues include sexually transmitted diseases, abortions and infertility, family medical history/genetic disorders, mental illness, drug/alcohol related incidents, lists of previous operations/procedures/dates and current medications. Participants believe they should be asked for permission before their health information is used for any purpose other than medical treatment. However, consent and privacy concerns are not necessary related

  19. Database Description - KOME | LSDB Archive [Life Science Database Archive metadata

    Lifescience Database Archive (English)

    Full Text Available base Description General information of database Database name KOME Alternative nam... Sciences Plant Genome Research Unit Shoshi Kikuchi E-mail : Database classification Plant databases - Rice ...Organism Taxonomy Name: Oryza sativa Taxonomy ID: 4530 Database description Information about approximately ...Hayashizaki Y, Kikuchi S. Journal: PLoS One. 2007 Nov 28; 2(11):e1235. External Links: Original website information Database...OS) Rice mutant panel database (Tos17) A Database of Plant Cis-acting Regulatory

  20. Opportunities for biotechnology and policy regarding mycotoxin issues in international trade.

    Science.gov (United States)

    Kendra, David F; Dyer, Rex B

    2007-10-20

    Despite being introduced more than a decade ago, agricultural biotechnology still remains framed in controversy impacting both the global economy and international regulations. Controversies surrounding agricultural biotechnology produced crops and foods commonly focus on human and environmental safety, intellectual property rights, consumer choice, ethics, food security, poverty reduction and environmental conservation. Originally, some consumers were reluctant to accept the first generation agricultural biotechnology products because they appeared to primarily benefit agricultural producers; however, it is clear from continued evaluations that these technologies also improved both the safety and wholesomeness of food and helped improve the environment. Plants engineered to resist insect pests and tolerate less toxic pesticides resulted in improved yields thereby enabling farmers to produce more food per acre while reducing the need for herbicides, pesticides, and water and tilling. An indirect benefit of reduced pest damage in transgenic corn expressing genes to control insect pests is lower levels of mycotoxins, most notably those caused by the genus Fusarium. Mycotoxins are an important regulatory issue globally because of their toxic and carcinogenic potential to humans and animals. Complicating this issue is the fact that toxicological databases for mycotoxins are relatively incomplete compared to other food contaminants. Current debates about agricultural biotechnology and mycotoxins reveal significant differences in perception of associated risks and benefits. When faced with uncertainty, regulators tend to set limits as low as possible. Additionally, some regulators invoke the "Precautionary Principle" when limited information is available or disputes over interpretation exist for possible contaminants, including mycotoxins. A major concern regarding use of the "Precautionary Principle" is the appearance that regulators can justify setting any limit on the