WorldWideScience

Sample records for biotechnology information database

  1. National Center for Biotechnology Information

    Science.gov (United States)

    ... to NCBI Sign Out NCBI National Center for Biotechnology Information Search database All Databases Assembly Biocollections BioProject ... Search Welcome to NCBI The National Center for Biotechnology Information advances science and health by providing access ...

  2. Biotechnology information service of the GDR

    International Nuclear Information System (INIS)

    Poetzsch, E.

    1990-05-01

    The paper gives a survey of the biotechnology information in the GDR and describes the establishment of the Biotechnology Information Service of the GDR (BioInfo GDR). BioInfo GDR is a referral database and is to provide information on information sources available in the GDR, and on institutions working in the various fields of biotechnology in the GDR. In addition, some general problems of the building and use of databases are discussed. (author). 8 refs

  3. Physiological Information Database (PID)

    Science.gov (United States)

    EPA has developed a physiological information database (created using Microsoft ACCESS) intended to be used in PBPK modeling. The database contains physiological parameter values for humans from early childhood through senescence as well as similar data for laboratory animal spec...

  4. Plant genome resources at the national center for biotechnology information.

    Science.gov (United States)

    Wheeler, David L; Smith-White, Brian; Chetvernin, Vyacheslav; Resenchuk, Sergei; Dombrowski, Susan M; Pechous, Steven W; Tatusova, Tatiana; Ostell, James

    2005-07-01

    The National Center for Biotechnology Information (NCBI) integrates data from more than 20 biological databases through a flexible search and retrieval system called Entrez. A core Entrez database, Entrez Nucleotide, includes GenBank and is tightly linked to the NCBI Taxonomy database, the Entrez Protein database, and the scientific literature in PubMed. A suite of more specialized databases for genomes, genes, gene families, gene expression, gene variation, and protein domains dovetails with the core databases to make Entrez a powerful system for genomic research. Linked to the full range of Entrez databases is the NCBI Map Viewer, which displays aligned genetic, physical, and sequence maps for eukaryotic genomes including those of many plants. A specialized plant query page allow maps from all plant genomes covered by the Map Viewer to be searched in tandem to produce a display of aligned maps from several species. PlantBLAST searches against the sequences shown in the Map Viewer allow BLAST alignments to be viewed within a genomic context. In addition, precomputed sequence similarities, such as those for proteins offered by BLAST Link, enable fluid navigation from unannotated to annotated sequences, quickening the pace of discovery. NCBI Web pages for plants, such as Plant Genome Central, complete the system by providing centralized access to NCBI's genomic resources as well as links to organism-specific Web pages beyond NCBI.

  5. Biotechnology

    International Nuclear Information System (INIS)

    Lewanika, Mbikusita Mwananyanda

    2005-01-01

    The article sets out to explain in simple terms the main concepts of Biotechnology beginning with traditional biotechnology to modern biotechnology. It outlines fundamentals of Recombinant Deoxyribonucleic Acid (DNA), Genetically Modified Organisms (GMOs) and Genetic Engineering. The article offers a discussion of the benefits, disadvantages and the general public and policy concerns regarding genetically modified organisms

  6. Afghanistan / Pakistan Information Database

    Data.gov (United States)

    US Agency for International Development — USAID Info is a dynamic, web-based information management application designed to organize, monitor, and store OAPA Missions? implementation- and performance-level...

  7. Effect of Religious Belief on Informal Reasoning about Biotechnology Issues

    Science.gov (United States)

    Pope, Timothy; Dawson, Vaille; Koul, Rekha

    2017-01-01

    The advances of modern biotechnology provide teachers with a number of opportunities to explore socioscientific issues, and in doing so to enhance students' reasoning skills. Although some attempt has been made to understand cultural differences in students' informal reasoning across international and regional boundaries, there is limited research…

  8. Consumer demand for information about agricultural biotechnology

    DEFF Research Database (Denmark)

    Scholderer, Joachim; Czienskowski, Uwe

    novel-food information sites, and (c) the effect of the different types of information on product preferences and attitudes towards novel foods and food technologies. Three paradigmatic novel food examples were used in the study: a genetically modified potato with altered levels of inherent toxicants...... examples in this study, one was a conventional competitor product, and one was an organic product. A newly developed process-tracing method allowed the unobtrusive monitoring of attribute information uptake from photos of product packages. In the second part of the experiment, information access...

  9. Biotechnology

    Energy Technology Data Exchange (ETDEWEB)

    NONE

    2011-07-01

    The guidelines of the Biotechnology Program are research and development aiming to develop and manufacture products of pharmaceutical interest. This Program has two main research areas, namely Pituitary Hormones and Biopharmaceuticals. The first one comprises a group with a long experience on Recombinant Human Pituitary Hormone synthesis, purification and characterization. The Biopharmaceutical area is dedicated to the research of isolation, structural analysis and biological activities in different biological system of macromolecules. The Animal Laboratory Division of IPEN is responsible for the breeding and production of small laboratory animal.

  10. National Center for Biotechnology Information Celebrates 25th Anniversary | NIH MedlinePlus the Magazine

    Science.gov (United States)

    ... page please turn JavaScript on. National Center for Biotechnology Information Celebrates 25th Anniversary Past Issues / Winter 2014 ... Photo courtesy of NLM The National Center for Biotechnology Information (NCBI), a component of NLM, celebrated its ...

  11. Biotechnology

    Energy Technology Data Exchange (ETDEWEB)

    NONE

    2014-07-01

    The guidelines of the Biotechnology Program are research and development aiming at developing and manufacturing products of pharmaceutical interest. This Program has two main research areas, namely Pituitary Hormones and Biopharmaceuticals. The first one comprises a group with a long experience on Recombinant Human Pituitary Hormone synthesis, purification and characterization. Up to now they have worked mostly with human growth hormone (hGH), human prolactin (hPRL), human thyrotropin (hTSH), human follicle stimulating hormone (hFSH) and human luteotropin (hLH), with a particular emphasis on glycoprotein carbohydrate structures. An important research line is devoted to Growth Hormone Gene Therapy, working mostly on animal models: immunocompetent and immunodeficient-dwarf mice. For several years this development has been based on ex vivo grafting of transduced keratinocytes, while more recently very promising results have been obtained with the injections and electroporation of naked plasmid DNA. Besides research, they have also activities in the Biotechnological Production and Downstream Processing of the same recombinant hormones, which are produced in both E. coli and mammalian cells and in the development of joint-ventures with the National Industry. The biological effects of radiation on cells are also studied, specially concerning the administration of {sup 131}I together with thyroid-stimulating hormone in thyroid cancer. The Biopharmaceutical area is dedicated to the research of isolation, structural analysis and biological activities in different biological systems of macromolecules. These macromolecules are peptides or proteins, either native or recombinant with medical or pharmaceutical interest. During this period new proteins related to serine protease activity, breast cancer development and angiogenesis were described. The effects of ionizing radiation on macromolecules have also been investigated to detoxify animal venoms in order to improve antigens

  12. Biotechnology

    International Nuclear Information System (INIS)

    2014-01-01

    The guidelines of the Biotechnology Program are research and development aiming at developing and manufacturing products of pharmaceutical interest. This Program has two main research areas, namely Pituitary Hormones and Biopharmaceuticals. The first one comprises a group with a long experience on Recombinant Human Pituitary Hormone synthesis, purification and characterization. Up to now they have worked mostly with human growth hormone (hGH), human prolactin (hPRL), human thyrotropin (hTSH), human follicle stimulating hormone (hFSH) and human luteotropin (hLH), with a particular emphasis on glycoprotein carbohydrate structures. An important research line is devoted to Growth Hormone Gene Therapy, working mostly on animal models: immunocompetent and immunodeficient-dwarf mice. For several years this development has been based on ex vivo grafting of transduced keratinocytes, while more recently very promising results have been obtained with the injections and electroporation of naked plasmid DNA. Besides research, they have also activities in the Biotechnological Production and Downstream Processing of the same recombinant hormones, which are produced in both E. coli and mammalian cells and in the development of joint-ventures with the National Industry. The biological effects of radiation on cells are also studied, specially concerning the administration of 131 I together with thyroid-stimulating hormone in thyroid cancer. The Biopharmaceutical area is dedicated to the research of isolation, structural analysis and biological activities in different biological systems of macromolecules. These macromolecules are peptides or proteins, either native or recombinant with medical or pharmaceutical interest. During this period new proteins related to serine protease activity, breast cancer development and angiogenesis were described. The effects of ionizing radiation on macromolecules have also been investigated to detoxify animal venoms in order to improve antigens for

  13. Development of a PSA information database system

    International Nuclear Information System (INIS)

    Kim, Seung Hwan

    2005-01-01

    The need to develop the PSA information database for performing a PSA has been growing rapidly. For example, performing a PSA requires a lot of data to analyze, to evaluate the risk, to trace the process of results and to verify the results. PSA information database is a system that stores all PSA related information into the database and file system with cross links to jump to the physical documents whenever they are needed. Korea Atomic Energy Research Institute is developing a PSA information database system, AIMS (Advanced Information Management System for PSA). The objective is to integrate and computerize all the distributed information of a PSA into a system and to enhance the accessibility to PSA information for all PSA related activities. This paper describes how we implemented such a database centered application in the view of two areas, database design and data (document) service

  14. Audit Database and Information Tracking System

    Data.gov (United States)

    Social Security Administration — This database contains information about the Social Security Administration's audits regarding SSA agency performance and compliance. These audits can be requested...

  15. Online Databases as Sources of Linguistic Information.

    Science.gov (United States)

    Sano, Hikomaro

    1988-01-01

    This description of the types of linguistic information obtainable from online databases generally used to acquire technical information includes examples of equivalent words, English usage, and statistical linguistic data. The implications of online databases as substitutes for dictionaries and as corpora for linguistic survey are considered.…

  16. Database, expert systems, information retrieval

    International Nuclear Information System (INIS)

    Fedele, P.; Grandoni, G.; Mammarella, M.C.

    1989-12-01

    The great debate concerning the Italian high-school reform has induced a ferment of activity among the most interested and sensible of people. This was clearly demonstrated by the course 'Innovazione metodologico-didattica e tecnologie informatiche' organized for the staff of the 'lstituto Professionale L. Einaudi' of Lamezia Terme. The course was an interesting opportunity for discussions and interaction between the world of School and computer technology used in the Research field. This three day course included theoretical and practical lessons, showing computer facilities that could be useful for teaching. During the practical lessons some computer tools were presented from the very simple Electronic Sheets to the more complicated information Retrieval on CD-ROM interactive realizations. The main topics will be discussed later. They are: Modelling, Data Base, Integrated Information Systems, Expert Systems, Information Retrieval. (author)

  17. HIERARCHICAL ORGANIZATION OF INFORMATION, IN RELATIONAL DATABASES

    Directory of Open Access Journals (Sweden)

    Demian Horia

    2008-05-01

    Full Text Available In this paper I will present different types of representation, of hierarchical information inside a relational database. I also will compare them to find the best organization for specific scenarios.

  18. HIERARCHICAL ORGANIZATION OF INFORMATION, IN RELATIONAL DATABASES

    OpenAIRE

    Demian Horia

    2008-01-01

    In this paper I will present different types of representation, of hierarchical information inside a relational database. I also will compare them to find the best organization for specific scenarios.

  19. Saccharomyces genome database informs human biology

    OpenAIRE

    Skrzypek, Marek S; Nash, Robert S; Wong, Edith D; MacPherson, Kevin A; Hellerstedt, Sage T; Engel, Stacia R; Karra, Kalpana; Weng, Shuai; Sheppard, Travis K; Binkley, Gail; Simison, Matt; Miyasato, Stuart R; Cherry, J Michael

    2017-01-01

    Abstract The Saccharomyces Genome Database (SGD; http://www.yeastgenome.org) is an expertly curated database of literature-derived functional information for the model organism budding yeast, Saccharomyces cerevisiae. SGD constantly strives to synergize new types of experimental data and bioinformatics predictions with existing data, and to organize them into a comprehensive and up-to-date information resource. The primary mission of SGD is to facilitate research into the biology of yeast and...

  20. Creating databases for biological information: an introduction.

    Science.gov (United States)

    Stein, Lincoln

    2013-06-01

    The essence of bioinformatics is dealing with large quantities of information. Whether it be sequencing data, microarray data files, mass spectrometric data (e.g., fingerprints), the catalog of strains arising from an insertional mutagenesis project, or even large numbers of PDF files, there inevitably comes a time when the information can simply no longer be managed with files and directories. This is where databases come into play. This unit briefly reviews the characteristics of several database management systems, including flat file, indexed file, relational databases, and NoSQL databases. It compares their strengths and weaknesses and offers some general guidelines for selecting an appropriate database management system. Copyright 2013 by JohnWiley & Sons, Inc.

  1. Discovering new information in bibliographic databases

    Directory of Open Access Journals (Sweden)

    Emil Hudomalj

    2005-01-01

    Full Text Available Databases contain information that can usually not be revealed by standard query systems. For that purpose, the methods for knowledge discovery from databases can be applied, which enable the user to browse aggregated data, discover trends, produce online reports, explore possible new associations within the data etc. Such methods are successfully employed in various fields, such as banking, insurance and telecommunications, while they are seldom used in libraries. The article reviews the development of query systems for bibliographic databases, including some early attempts to apply modern knowledge discovery methods. Analytical databases are described in more detail, since they usually serve as the basis for knowledge discovery. Data mining approaches are presented, since they are a central step in the knowledge discovery process. The key role of librarians who can play a key part in developing systems for finding new information in existing bibliographic databases is stressed.

  2. Nuclear Criticality Information System. Database examples

    Energy Technology Data Exchange (ETDEWEB)

    Foret, C.A.

    1984-06-01

    The purpose of this publication is to provide our users with a guide to using the Nuclear Criticality Information System (NCIS). It is comprised of an introduction, an information and resources section, a how-to-use section, and several useful appendices. The main objective of this report is to present a clear picture of the NCIS project and its available resources as well as assisting our users in accessing the database and using the TIS computer to process data. The introduction gives a brief description of the NCIS project, the Technology Information System (TIS), online user information, future plans and lists individuals to contact for additional information about the NCIS project. The information and resources section outlines the NCIS database and describes the resources that are available. The how-to-use section illustrates access to the NCIS database as well as searching datafiles for general or specific data. It also shows how to access and read the NCIS news section as well as connecting to other information centers through the TIS computer.

  3. Nuclear Criticality Information System. Database examples

    International Nuclear Information System (INIS)

    Foret, C.A.

    1984-06-01

    The purpose of this publication is to provide our users with a guide to using the Nuclear Criticality Information System (NCIS). It is comprised of an introduction, an information and resources section, a how-to-use section, and several useful appendices. The main objective of this report is to present a clear picture of the NCIS project and its available resources as well as assisting our users in accessing the database and using the TIS computer to process data. The introduction gives a brief description of the NCIS project, the Technology Information System (TIS), online user information, future plans and lists individuals to contact for additional information about the NCIS project. The information and resources section outlines the NCIS database and describes the resources that are available. The how-to-use section illustrates access to the NCIS database as well as searching datafiles for general or specific data. It also shows how to access and read the NCIS news section as well as connecting to other information centers through the TIS computer

  4. Olympic Information in the SPORT Database.

    Science.gov (United States)

    Belna, Alison M.; And Others

    1984-01-01

    Profiles the SPORT database, produced by Sport Information Resource Centre, Ottawa, Ontario, which provides extensive coverage of individual sports including practice, training and equipment, recreation, sports medicine, physical education, sport facilities, and international sport history. Olympic coverage in SPORT, sports sciences, online…

  5. NABIC marker database: A molecular markers information network of agricultural crops.

    Science.gov (United States)

    Kim, Chang-Kug; Seol, Young-Joo; Lee, Dong-Jun; Jeong, In-Seon; Yoon, Ung-Han; Lee, Gang-Seob; Hahn, Jang-Ho; Park, Dong-Suk

    2013-01-01

    In 2013, National Agricultural Biotechnology Information Center (NABIC) reconstructs a molecular marker database for useful genetic resources. The web-based marker database consists of three major functional categories: map viewer, RSN marker and gene annotation. It provides 7250 marker locations, 3301 RSN marker property, 3280 molecular marker annotation information in agricultural plants. The individual molecular marker provides information such as marker name, expressed sequence tag number, gene definition and general marker information. This updated marker-based database provides useful information through a user-friendly web interface that assisted in tracing any new structures of the chromosomes and gene positional functions using specific molecular markers. The database is available for free at http://nabic.rda.go.kr/gere/rice/molecularMarkers/

  6. Evolution of Biotechnology and Information Technology and Its Impact on Human Security

    Directory of Open Access Journals (Sweden)

    Elena S. Zinovieva

    2015-01-01

    Full Text Available Abstract: The development of post-industrial society initiates profound economic, technological and cultural change in the way of life of all mankind. The revolutionary breakthroughs in the field of new technologies such as biotechnology and information technology are reflected in all spheres of human activity, directly affecting the human security. The article analyzes the consequences of widespread usage biotechnology and information technology in the foreign policy practice on the basis of the human security theory. The detailed description of the main directions of the use of biometric technology in the foreign policy and consular practices is provided, the challenges and threats to information security associated with biometrics are analyzed, arising from widespread biotechnology are the main challenges and threats to as well as human security threats arising at the present stage of development and application of these technologies. Human security threats associated with the use of biotechnology are placed in the broader context of global trends in scientific and technological development. The recommendations are formulated in the field of foreign policy and international cooperation, which would neutralize new threats to international and personal safety arising at the present stage of development of biotechnology. The authors conclude that in order to ensure ethical regulation of new technologies that address issues of human security, it is necessary to organize multi-stakeholder partnerships at national and international level with the participation of states, representatives of civil society, business and the research community.

  7. CONSUMER BIOTECHNOLOGY FOOD AND NUTRITION INFORMATION SOURCES: THE TRUST FACTOR

    OpenAIRE

    Ekanem, Enefiok P.; Muhammad, Safdar; Tegegne, Fisseha; Singh, Surendra P.

    2004-01-01

    Although much has been written on consumer attitudes toward genetically modified foods, not much is known about how or where consumers get the information for the decisions they make about genetically modified foods. This paper reports on the media used by consumers in acquiring information about biotech food and nutrition issues, and examines how much trust consumers put in selected information sources. The paper also discusses how socio-economic variables affect level of trust in selected s...

  8. Saccharomyces genome database informs human biology.

    Science.gov (United States)

    Skrzypek, Marek S; Nash, Robert S; Wong, Edith D; MacPherson, Kevin A; Hellerstedt, Sage T; Engel, Stacia R; Karra, Kalpana; Weng, Shuai; Sheppard, Travis K; Binkley, Gail; Simison, Matt; Miyasato, Stuart R; Cherry, J Michael

    2018-01-04

    The Saccharomyces Genome Database (SGD; http://www.yeastgenome.org) is an expertly curated database of literature-derived functional information for the model organism budding yeast, Saccharomyces cerevisiae. SGD constantly strives to synergize new types of experimental data and bioinformatics predictions with existing data, and to organize them into a comprehensive and up-to-date information resource. The primary mission of SGD is to facilitate research into the biology of yeast and to provide this wealth of information to advance, in many ways, research on other organisms, even those as evolutionarily distant as humans. To build such a bridge between biological kingdoms, SGD is curating data regarding yeast-human complementation, in which a human gene can successfully replace the function of a yeast gene, and/or vice versa. These data are manually curated from published literature, made available for download, and incorporated into a variety of analysis tools provided by SGD. © The Author(s) 2017. Published by Oxford University Press on behalf of Nucleic Acids Research.

  9. ASEAN Mineral Database and Information System (AMDIS)

    Science.gov (United States)

    Okubo, Y.; Ohno, T.; Bandibas, J. C.; Wakita, K.; Oki, Y.; Takahashi, Y.

    2014-12-01

    AMDIS has lunched officially since the Fourth ASEAN Ministerial Meeting on Minerals on 28 November 2013. In cooperation with Geological Survey of Japan, the web-based GIS was developed using Free and Open Source Software (FOSS) and the Open Geospatial Consortium (OGC) standards. The system is composed of the local databases and the centralized GIS. The local databases created and updated using the centralized GIS are accessible from the portal site. The system introduces distinct advantages over traditional GIS. Those are a global reach, a large number of users, better cross-platform capability, charge free for users, charge free for provider, easy to use, and unified updates. Raising transparency of mineral information to mining companies and to the public, AMDIS shows that mineral resources are abundant throughout the ASEAN region; however, there are many datum vacancies. We understand that such problems occur because of insufficient governance of mineral resources. Mineral governance we refer to is a concept that enforces and maximizes the capacity and systems of government institutions that manages minerals sector. The elements of mineral governance include a) strengthening of information infrastructure facility, b) technological and legal capacities of state-owned mining companies to fully-engage with mining sponsors, c) government-led management of mining projects by supporting the project implementation units, d) government capacity in mineral management such as the control and monitoring of mining operations, and e) facilitation of regional and local development plans and its implementation with the private sector.

  10. 75 FR 76831 - Publicly Available Consumer Product Safety Information Database

    Science.gov (United States)

    2010-12-09

    ... Safety Information Database; Final Rule #0;#0;Federal Register / Vol. 75 , No. 236 / Thursday, December 9... Publicly Available Consumer Product Safety Information Database AGENCY: Consumer Product Safety Commission... Database (``Database''). Section 212 of the Consumer Product Safety Improvement Act of 2008 (``CPSIA...

  11. Visualization of database structures for information retrieval

    Directory of Open Access Journals (Sweden)

    Grete Lisbjerg Jensen

    1994-12-01

    Full Text Available This paper describes the Book House system, which is designed to support children's information retrieval in libraries as part of their education. It is a shareware program available on CD-ROM or floppy disks, and comprises functionality for database searching as well as for classifying and storing book information in the database. The system concept is based on an understanding of children's domain structures and their capabilities for categorization of information needs in connection with their activities in schools, in school libraries or in public libraries. These structures are visualized in the interface by using metaphors and multimedia technology. Through the use of text, images and animation, the Book House encourages children - even at a very early age - to learn by doing in an enjoyable way, which plays on their previous experiences with computer games. Both words and pictures can be used for searching; this makes the system suitable for all age groups. Even children who have not yet learned to read properly can, by selecting pictures, search for and find those books they would like to have read aloud. Thus, at the very beginning of their school life, they can learn to search for books on their own. For the library community, such a system will provide an extended service which will increase the number of children's own searches and also improve the relevance, quality and utilization of the book collections in the libraries. A market research report on the need for an annual indexing service for books in the Book House format is in preparation by the Danish Library Centre A/S.

  12. Selection of nuclear power information database management system

    International Nuclear Information System (INIS)

    Zhang Shuxin; Wu Jianlei

    1996-01-01

    In the condition of the present database technology, in order to build the Chinese nuclear power information database (NPIDB) in the nuclear industry system efficiently at a high starting point, an important task is to select a proper database management system (DBMS), which is the hinge of the matter to build the database successfully. Therefore, this article explains how to build a practical information database about nuclear power, the functions of different database management systems, the reason of selecting relation database management system (RDBMS), the principles of selecting RDBMS, the recommendation of ORACLE management system as the software to build database and so on

  13. Databases

    Digital Repository Service at National Institute of Oceanography (India)

    Kunte, P.D.

    Information on bibliographic as well as numeric/textual databases relevant to coastal geomorphology has been included in a tabular form. Databases cover a broad spectrum of related subjects like coastal environment and population aspects, coastline...

  14. 47 CFR 69.120 - Line information database.

    Science.gov (United States)

    2010-10-01

    ... 47 Telecommunication 3 2010-10-01 2010-10-01 false Line information database. 69.120 Section 69...) ACCESS CHARGES Computation of Charges § 69.120 Line information database. (a) A charge that is expressed... from a local exchange carrier database to recover the costs of: (1) The transmission facilities between...

  15. Precise, dynamic information flow for database-backed applications

    OpenAIRE

    Yang, Jean; Hance, Travis; Austin, Thomas H.; Flanagan, Cormac; Chong, Stephen; Solar Lezama, Armando

    2016-01-01

    We present an approach for dynamic information flow control across the application and database. Our approach reduces the amount of policy code required, yields formal guarantees across the application and database, works with existing relational database implementations, and scales for realistic applications. In this paper, we present a programming model that factors out information flow policies from application code and database queries, a dynamic semantics for the underlying $^JDB$ core l...

  16. Development of a geotechnical information database.

    Science.gov (United States)

    2009-06-01

    The purpose of this project was to create a database for existing, current, and future geotechnical records and data. : The project originated from the Geotechnical Design Section at the Louisiana Department of Transportation and : Development (LADOT...

  17. Development of technical information database for high level waste disposal

    International Nuclear Information System (INIS)

    Kudo, Koji; Takada, Susumu; Kawanishi, Motoi

    2005-01-01

    A concept design of the high level waste disposal information database and the disposal technologies information database are explained. The high level waste disposal information database contains information on technologies, waste, management and rules, R and D, each step of disposal site selection, characteristics of sites, demonstration of disposal technology, design of disposal site, application for disposal permit, construction of disposal site, operation and closing. Construction of the disposal technologies information system and the geological disposal technologies information system is described. The screen image of the geological disposal technologies information system is shown. User is able to search the full text retrieval and attribute retrieval in the image. (S.Y. )

  18. Content-Based Information Retrieval from Forensic Databases

    NARCIS (Netherlands)

    Geradts, Z.J.M.H.

    2002-01-01

    In forensic science, the number of image databases is growing rapidly. For this reason, it is necessary to have a proper procedure for searching in these images databases based on content. The use of image databases results in more solved crimes; furthermore, statistical information can be obtained

  19. 48 CFR 804.1102 - Vendor Information Pages (VIP) Database.

    Science.gov (United States)

    2010-10-01

    ... (VIP) Database. 804.1102 Section 804.1102 Federal Acquisition Regulations System DEPARTMENT OF VETERANS AFFAIRS GENERAL ADMINISTRATIVE MATTERS Contract Execution 804.1102 Vendor Information Pages (VIP) Database. Prior to January 1, 2012, all VOSBs and SDVOSBs must be listed in the VIP database, available at http...

  20. Case Retrieval in Medical Databases by Fusing Heterogeneous Information

    OpenAIRE

    Gwénolé Quellec; Mathieu Lamard; Guy Cazuguel; Christian Roux

    2011-01-01

    A novel content-based heterogeneous information retrieval framework, particularly well suited to browse medical databases and support new generation computer aided diagnosis (CADx) systems, is presented in this paper. It was designed to retrieve possibly incomplete documents, consisting of several images and semantic information, from a database; more complex data types such as videos can also be included in the framework.

  1. Database and applications security integrating information security and data management

    CERN Document Server

    Thuraisingham, Bhavani

    2005-01-01

    This is the first book to provide an in-depth coverage of all the developments, issues and challenges in secure databases and applications. It provides directions for data and application security, including securing emerging applications such as bioinformatics, stream information processing and peer-to-peer computing. Divided into eight sections, each of which focuses on a key concept of secure databases and applications, this book deals with all aspects of technology, including secure relational databases, inference problems, secure object databases, secure distributed databases and emerging

  2. Database structure and file layout of Nuclear Power Plant Database. Database for design information on Light Water Reactors in Japan

    Energy Technology Data Exchange (ETDEWEB)

    Yamamoto, Nobuo [Japan Atomic Energy Research Inst., Tokai, Ibaraki (Japan). Tokai Research Establishment; Izumi, Fumio

    1995-12-01

    The Nuclear Power Plant Database (PPD) has been developed at the Japan Atomic Energy Research Institute (JAERI) to provide plant design information on domestic Light Water Reactors (LWRs) to be used for nuclear safety research and so forth. This database can run on the main frame computer in the JAERI Tokai Establishment. The PPD contains the information on the plant design concepts, the numbers, capacities, materials, structures and types of equipment and components, etc, based on the safety analysis reports of the domestic LWRs. This report describes the details of the PPD focusing on the database structure and layout of data files so that the users can utilize it efficiently. (author).

  3. Database structure and file layout of Nuclear Power Plant Database. Database for design information on Light Water Reactors in Japan

    International Nuclear Information System (INIS)

    Yamamoto, Nobuo; Izumi, Fumio.

    1995-12-01

    The Nuclear Power Plant Database (PPD) has been developed at the Japan Atomic Energy Research Institute (JAERI) to provide plant design information on domestic Light Water Reactors (LWRs) to be used for nuclear safety research and so forth. This database can run on the main frame computer in the JAERI Tokai Establishment. The PPD contains the information on the plant design concepts, the numbers, capacities, materials, structures and types of equipment and components, etc, based on the safety analysis reports of the domestic LWRs. This report describes the details of the PPD focusing on the database structure and layout of data files so that the users can utilize it efficiently. (author)

  4. Status report on nuclear power - information from STN databases

    International Nuclear Information System (INIS)

    Prinz, H.

    1995-01-01

    The worldwide future of nuclear power as seen about 25 years ago is presented based on a literature search in the INIS database. The role of nuclear power today, after TMI and Chernobyl, in energy supplies and in combating the greehouse effect is evaluated by literature searches in STN databases (e.g. INIS, ETDE, COMPENDEX, CA, ULIDAT, INSPEC). An evaluation is given of the different information contents of bibliographic databases such as INIS and pure information databases such as NLDB. (orig./HP)

  5. Content Is King: Databases Preserve the Collective Information of Science.

    Science.gov (United States)

    Yates, John R

    2018-03-22

    Databases store sequence information experimentally gathered to create resources that further science. In the last 20 years databases have become critical components of fields like proteomics where they provide the basis for large-scale and high-throughput proteomic informatics. Amos Bairoch, winner of the Association of Biomolecular Resource Facilities Frederick Sanger Award, has created some of the important databases proteomic research depends upon for accurate interpretation of data.

  6. Brain Tumor Database, a free relational database for collection and analysis of brain tumor patient information.

    Science.gov (United States)

    Bergamino, Maurizio; Hamilton, David J; Castelletti, Lara; Barletta, Laura; Castellan, Lucio

    2015-03-01

    In this study, we describe the development and utilization of a relational database designed to manage the clinical and radiological data of patients with brain tumors. The Brain Tumor Database was implemented using MySQL v.5.0, while the graphical user interface was created using PHP and HTML, thus making it easily accessible through a web browser. This web-based approach allows for multiple institutions to potentially access the database. The BT Database can record brain tumor patient information (e.g. clinical features, anatomical attributes, and radiological characteristics) and be used for clinical and research purposes. Analytic tools to automatically generate statistics and different plots are provided. The BT Database is a free and powerful user-friendly tool with a wide range of possible clinical and research applications in neurology and neurosurgery. The BT Database graphical user interface source code and manual are freely available at http://tumorsdatabase.altervista.org. © The Author(s) 2013.

  7. Creation of geographic information database of subsatellite calibration test site

    Science.gov (United States)

    Zyelyk, Ya. I.; Semeniv, O. V.

    2014-12-01

    The prototype of geographic information database (DB) of the sub-satellite calibration test site has been created, to which user can be accessed from the free open-source geographic information system Quantum GIS (QGIS) environment. QGIS is used as an integrator of all data and applications and visualizer of the satellite imagery and vector layers of test sites in the cartographic interface. Conversion of the database from the local representation in the MS Access to the server representation in the PostgreSQL environment has been performed. Dynamic application to QGIS for user interaction from QGIS environment with the object-relational database and to display information from the database has been created. Functional-algorithmic part of these application and the interface for user interaction with the database has been developed.

  8. DOE technology information management system database study report

    Energy Technology Data Exchange (ETDEWEB)

    Widing, M.A.; Blodgett, D.W.; Braun, M.D.; Jusko, M.J.; Keisler, J.M.; Love, R.J.; Robinson, G.L. [Argonne National Lab., IL (United States). Decision and Information Sciences Div.

    1994-11-01

    To support the missions of the US Department of Energy (DOE) Special Technologies Program, Argonne National Laboratory is defining the requirements for an automated software system that will search electronic databases on technology. This report examines the work done and results to date. Argonne studied existing commercial and government sources of technology databases in five general areas: on-line services, patent database sources, government sources, aerospace technology sources, and general technology sources. First, it conducted a preliminary investigation of these sources to obtain information on the content, cost, frequency of updates, and other aspects of their databases. The Laboratory then performed detailed examinations of at least one source in each area. On this basis, Argonne recommended which databases should be incorporated in DOE`s Technology Information Management System.

  9. Information Retrieval in Telemedicine: a Comparative Study on Bibliographic Databases.

    Science.gov (United States)

    Ahmadi, Maryam; Sarabi, Roghayeh Ershad; Orak, Roohangiz Jamshidi; Bahaadinbeigy, Kambiz

    2015-06-01

    The first step in each systematic review is selection of the most valid database that can provide the highest number of relevant references. This study was carried out to determine the most suitable database for information retrieval in telemedicine field. Cinhal, PubMed, Web of Science and Scopus databases were searched for telemedicine matched with Education, cost benefit and patient satisfaction. After analysis of the obtained results, the accuracy coefficient, sensitivity, uniqueness and overlap of databases were calculated. The studied databases differed in the number of retrieved articles. PubMed was identified as the most suitable database for retrieving information on the selected topics with the accuracy and sensitivity ratios of 50.7% and 61.4% respectively. The uniqueness percent of retrieved articles ranged from 38% for Pubmed to 3.0% for Cinhal. The highest overlap rate (18.6%) was found between PubMed and Web of Science. Less than 1% of articles have been indexed in all searched databases. PubMed is suggested as the most suitable database for starting search in telemedicine and after PubMed, Scopus and Web of Science can retrieve about 90% of the relevant articles.

  10. Virus variation resources at the National Center for Biotechnology Information: dengue virus

    Directory of Open Access Journals (Sweden)

    Rozanov Michael

    2009-04-01

    Full Text Available Abstract Background There is an increasing number of complete and incomplete virus genome sequences available in public databases. This large body of sequence data harbors information about epidemiology, phylogeny, and virulence. Several specialized databases, such as the NCBI Influenza Virus Resource or the Los Alamos HIV database, offer sophisticated query interfaces along with integrated exploratory data analysis tools for individual virus species to facilitate extracting this information. Thus far, there has not been a comprehensive database for dengue virus, a significant public health threat. Results We have created an integrated web resource for dengue virus. The technology developed for the NCBI Influenza Virus Resource has been extended to process non-segmented dengue virus genomes. In order to allow efficient processing of the dengue genome, which is large in comparison with individual influenza segments, we developed an offline pre-alignment procedure which generates a multiple sequence alignment of all dengue sequences. The pre-calculated alignment is then used to rapidly create alignments of sequence subsets in response to user queries. This improvement in technology will also facilitate the incorporation of additional virus species in the future. The set of virus-specific databases at NCBI, which will be referred to as Virus Variation Resources (VVR, allow users to build complex queries against virus-specific databases and then apply exploratory data analysis tools to the results. The metadata is automatically collected where possible, and extended with data extracted from the literature. Conclusion The NCBI Dengue Virus Resource integrates dengue sequence information with relevant metadata (sample collection time and location, disease severity, serotype, sequenced genome region and facilitates retrieval and preliminary analysis of dengue sequences using integrated web analysis and visualization tools.

  11. Strategic management of biotechnology agents.

    Science.gov (United States)

    Huber, S L

    1993-07-01

    The use of biologic response modifiers to demonstrate a value-driven approach to strategic management by pharmacists is described. To participate in decisions on the use of technology in their institutions, pharmacists must practice strategic management. This process includes environmental scanning, analysis of clinical and pharmacoeconomic data, and development of clinical management approaches. It is ideal for analyzing biologic response modifiers such as filgrastim and sargramostim. Emphasis must be placed on maximizing the fit among the products, the institution, and the health care environment. Pharmacists will find plentiful opportunities for clinical management with biotechnology agents. Practitioners who specialize in determining the total cost of care by using pharmacoeconomic methods are needed, as are practitioners trained to monitor the complicated biotechnology agents. Also, the institution needs to forecast accurately the impact of emerging biotechnology agents. If pharmacists can develop and control clinical, pharmacoeconomic, and reimbursement information databases for biotechnology agents, the pharmacy profession will be in a strong position to meet the challenges of biotechnology and realize the inherent opportunities.

  12. Database system selection for marketing strategies support in information systems

    Directory of Open Access Journals (Sweden)

    František Dařena

    2007-01-01

    Full Text Available In today’s dynamically changing environment marketing has a significant role. Creating successful marketing strategies requires large amount of high quality information of various kinds and data types. A powerful database management system is a necessary condition for marketing strategies creation support. The paper briefly describes the field of marketing strategies and specifies the features that should be provided by database systems in connection with these strategies support. Major commercial (Oracle, DB2, MS SQL, Sybase and open-source (PostgreSQL, MySQL, Firebird databases are than examined from the point of view of accordance with these characteristics and their comparison in made. The results are useful for making the decision before acquisition of a database system during information system’s hardware architecture specification.

  13. 2008 Availability and Utilization of Electronic Information Databases ...

    African Journals Online (AJOL)

    Gbaje E.S

    electronic information databases include; research work, to update knowledge in their field of interest and Current awareness. A number of factors that affect the provision and use of electronic information resources in the Agricultural Complex such as, power outages, slow Internet services and insufficient computers were ...

  14. Case retrieval in medical databases by fusing heterogeneous information.

    Science.gov (United States)

    Quellec, Gwénolé; Lamard, Mathieu; Cazuguel, Guy; Roux, Christian; Cochener, Béatrice

    2011-01-01

    A novel content-based heterogeneous information retrieval framework, particularly well suited to browse medical databases and support new generation computer aided diagnosis (CADx) systems, is presented in this paper. It was designed to retrieve possibly incomplete documents, consisting of several images and semantic information, from a database; more complex data types such as videos can also be included in the framework. The proposed retrieval method relies on image processing, in order to characterize each individual image in a document by their digital content, and information fusion. Once the available images in a query document are characterized, a degree of match, between the query document and each reference document stored in the database, is defined for each attribute (an image feature or a metadata). A Bayesian network is used to recover missing information if need be. Finally, two novel information fusion methods are proposed to combine these degrees of match, in order to rank the reference documents by decreasing relevance for the query. In the first method, the degrees of match are fused by the Bayesian network itself. In the second method, they are fused by the Dezert-Smarandache theory: the second approach lets us model our confidence in each source of information (i.e., each attribute) and take it into account in the fusion process for a better retrieval performance. The proposed methods were applied to two heterogeneous medical databases, a diabetic retinopathy database and a mammography screening database, for computer aided diagnosis. Precisions at five of 0.809 ± 0.158 and 0.821 ± 0.177, respectively, were obtained for these two databases, which is very promising.

  15. Museum Information System of Serbia recent approach to database modeling

    OpenAIRE

    Gavrilović, Goran

    2007-01-01

    The paper offers an illustration of the main parameters for museum database projection (case study of Integrated Museum Information System of Serbia). The simple case of museum data model development and implementation was described. The main aim is to present the advantages of ORM (Object Role Modeling) methodology by using Microsoft Visio as an eligible programmed support in formalization of museum business rules.

  16. Integration of Information Retrieval and Database Management Systems.

    Science.gov (United States)

    Deogun, Jitender S.; Raghavan, Vijay V.

    1988-01-01

    Discusses the motivation for integrating information retrieval and database management systems, and proposes a probabilistic retrieval model in which records in a file may be composed of attributes (formatted data items) and descriptors (content indicators). The details and resolutions of difficulties involved in integrating such systems are…

  17. An information integration system for structured documents, Web, and databases

    OpenAIRE

    Morishima, Atsuyuki

    1998-01-01

    Rapid advance in computer network technology has changed the style of computer utilization. Distributed computing resources over world-wide computer networks are available from our local computers. They include powerful computers and a variety of information sources. This change is raising more advanced requirements. Integration of distributed information sources is one of such requirements. In addition to conventional databases, structured documents have been widely used, and have increasing...

  18. Structure and function design for nuclear facilities decommissioning information database

    International Nuclear Information System (INIS)

    Liu Yongkuo; Song Yi; Wu Xiaotian; Liu Zhen

    2014-01-01

    The decommissioning of nuclear facilities is a radioactive and high-risk project which has to consider the effect of radiation and nuclear waste disposal, so the information system of nuclear facilities decommissioning project must be established to ensure the safety of the project. In this study, by collecting the decommissioning activity data, the decommissioning database was established, and based on the database, the decommissioning information database (DID) was developed. The DID can perform some basic operations, such as input, delete, modification and query of the decommissioning information data, and in accordance with processing characteristics of various types of information data, it can also perform information management with different function models. On this basis, analysis of the different information data will be done. The system is helpful for enhancing the management capability of the decommissioning process and optimizing the arrangements of the project, it also can reduce radiation dose of the workers, so the system is quite necessary for safe decommissioning of nuclear facilities. (authors)

  19. A new database for medical images and information

    Science.gov (United States)

    Tahmoush, Dave; Samet, Hanan

    2007-03-01

    We present a medical image and medical record database for the storage, research, transmission, and evaluation of medical images, as well as tele-medicine applications. Any medical image from a source that supports the DICOM standard can be stored and accessed, as well as associated analysis and annotations. Information and image retrieval can be done based on patient info, date, doctor's annotations, features in the images, or a spatial combination of features. Secure access and transmission is addressed for tele-medicine applications. This database application follows all HIPPA regulations.

  20. 9th Asian Conference on Intelligent Information and Database Systems

    CERN Document Server

    Nguyen, Ngoc; Shirai, Kiyoaki

    2017-01-01

    This book presents recent research in intelligent information and database systems. The carefully selected contributions were initially accepted for presentation as posters at the 9th Asian Conference on Intelligent Information and Database Systems (ACIIDS 2017) held from to 5 April 2017 in Kanazawa, Japan. While the contributions are of an advanced scientific level, several are accessible for non-expert readers. The book brings together 47 chapters divided into six main parts: • Part I. From Machine Learning to Data Mining. • Part II. Big Data and Collaborative Decision Support Systems, • Part III. Computer Vision Analysis, Detection, Tracking and Recognition, • Part IV. Data-Intensive Text Processing, • Part V. Innovations in Web and Internet Technologies, and • Part VI. New Methods and Applications in Information and Software Engineering. The book is an excellent resource for researchers and those working in algorithmics, artificial and computational intelligence, collaborative systems, decisio...

  1. Accelerating Information Retrieval from Profile Hidden Markov Model Databases.

    Science.gov (United States)

    Tamimi, Ahmad; Ashhab, Yaqoub; Tamimi, Hashem

    2016-01-01

    Profile Hidden Markov Model (Profile-HMM) is an efficient statistical approach to represent protein families. Currently, several databases maintain valuable protein sequence information as profile-HMMs. There is an increasing interest to improve the efficiency of searching Profile-HMM databases to detect sequence-profile or profile-profile homology. However, most efforts to enhance searching efficiency have been focusing on improving the alignment algorithms. Although the performance of these algorithms is fairly acceptable, the growing size of these databases, as well as the increasing demand for using batch query searching approach, are strong motivations that call for further enhancement of information retrieval from profile-HMM databases. This work presents a heuristic method to accelerate the current profile-HMM homology searching approaches. The method works by cluster-based remodeling of the database to reduce the search space, rather than focusing on the alignment algorithms. Using different clustering techniques, 4284 TIGRFAMs profiles were clustered based on their similarities. A representative for each cluster was assigned. To enhance sensitivity, we proposed an extended step that allows overlapping among clusters. A validation benchmark of 6000 randomly selected protein sequences was used to query the clustered profiles. To evaluate the efficiency of our approach, speed and recall values were measured and compared with the sequential search approach. Using hierarchical, k-means, and connected component clustering techniques followed by the extended overlapping step, we obtained an average reduction in time of 41%, and an average recall of 96%. Our results demonstrate that representation of profile-HMMs using a clustering-based approach can significantly accelerate data retrieval from profile-HMM databases.

  2. Accelerating Information Retrieval from Profile Hidden Markov Model Databases.

    Directory of Open Access Journals (Sweden)

    Ahmad Tamimi

    Full Text Available Profile Hidden Markov Model (Profile-HMM is an efficient statistical approach to represent protein families. Currently, several databases maintain valuable protein sequence information as profile-HMMs. There is an increasing interest to improve the efficiency of searching Profile-HMM databases to detect sequence-profile or profile-profile homology. However, most efforts to enhance searching efficiency have been focusing on improving the alignment algorithms. Although the performance of these algorithms is fairly acceptable, the growing size of these databases, as well as the increasing demand for using batch query searching approach, are strong motivations that call for further enhancement of information retrieval from profile-HMM databases. This work presents a heuristic method to accelerate the current profile-HMM homology searching approaches. The method works by cluster-based remodeling of the database to reduce the search space, rather than focusing on the alignment algorithms. Using different clustering techniques, 4284 TIGRFAMs profiles were clustered based on their similarities. A representative for each cluster was assigned. To enhance sensitivity, we proposed an extended step that allows overlapping among clusters. A validation benchmark of 6000 randomly selected protein sequences was used to query the clustered profiles. To evaluate the efficiency of our approach, speed and recall values were measured and compared with the sequential search approach. Using hierarchical, k-means, and connected component clustering techniques followed by the extended overlapping step, we obtained an average reduction in time of 41%, and an average recall of 96%. Our results demonstrate that representation of profile-HMMs using a clustering-based approach can significantly accelerate data retrieval from profile-HMM databases.

  3. Database of Legal Terms for Communicative and Knowledge Information Tools

    DEFF Research Database (Denmark)

    Nielsen, Sandro

    2014-01-01

    Online law dictionaries based on traditional linguistic and text linguistic approaches do not fully satisfy the needs for help lawyers, students and professional translators have in specific types of situation. This state of affairs can be remedied by re−assessing the practical and theoretical...... foundations of online dictionaries in light of the technical options available for online information tools combined with modern lexicographic principles. The above discussion indicates that the legal database is a repository of structured data serving online dictionaries that search for data in databases...... or specific legal matters in cognitive situations. The theoretical foundation and practical implications of this type of online law dictionaries enable lexicographers to make dictionaries that satisfy the needs of lawyers, students and translators for practical information tools....

  4. 8th Asian Conference on Intelligent Information and Database Systems

    CERN Document Server

    Madeyski, Lech; Nguyen, Ngoc

    2016-01-01

    The objective of this book is to contribute to the development of the intelligent information and database systems with the essentials of current knowledge, experience and know-how. The book contains a selection of 40 chapters based on original research presented as posters during the 8th Asian Conference on Intelligent Information and Database Systems (ACIIDS 2016) held on 14–16 March 2016 in Da Nang, Vietnam. The papers to some extent reflect the achievements of scientific teams from 17 countries in five continents. The volume is divided into six parts: (a) Computational Intelligence in Data Mining and Machine Learning, (b) Ontologies, Social Networks and Recommendation Systems, (c) Web Services, Cloud Computing, Security and Intelligent Internet Systems, (d) Knowledge Management and Language Processing, (e) Image, Video, Motion Analysis and Recognition, and (f) Advanced Computing Applications and Technologies. The book is an excellent resource for researchers, those working in artificial intelligence, mu...

  5. A Novel Database Design for Student Information System

    OpenAIRE

    Noraziah Ahmad; Nawsher Khan; Ahmed N.A. Alla; Abul H. Beg

    2010-01-01

    Problem statement: A new system designed, where necessary and alternative solutions given to solve the different problems and the most feasible solution were selected. Approach: This study presents the database design for student information system. Computerization of a system means to change it from a manual to a computer-based, system to automate the work and to provide efficiency, accuracy, timelessness, security and economy. Results: After undertaking an in-depth examination of the Ayub M...

  6. The eNanoMapper database for nanomaterial safety information

    Directory of Open Access Journals (Sweden)

    Nina Jeliazkova

    2015-07-01

    Full Text Available Background: The NanoSafety Cluster, a cluster of projects funded by the European Commision, identified the need for a computational infrastructure for toxicological data management of engineered nanomaterials (ENMs. Ontologies, open standards, and interoperable designs were envisioned to empower a harmonized approach to European research in nanotechnology. This setting provides a number of opportunities and challenges in the representation of nanomaterials data and the integration of ENM information originating from diverse systems. Within this cluster, eNanoMapper works towards supporting the collaborative safety assessment for ENMs by creating a modular and extensible infrastructure for data sharing, data analysis, and building computational toxicology models for ENMs.Results: The eNanoMapper database solution builds on the previous experience of the consortium partners in supporting diverse data through flexible data storage, open source components and web services. We have recently described the design of the eNanoMapper prototype database along with a summary of challenges in the representation of ENM data and an extensive review of existing nano-related data models, databases, and nanomaterials-related entries in chemical and toxicogenomic databases. This paper continues with a focus on the database functionality exposed through its application programming interface (API, and its use in visualisation and modelling. Considering the preferred community practice of using spreadsheet templates, we developed a configurable spreadsheet parser facilitating user friendly data preparation and data upload. We further present a web application able to retrieve the experimental data via the API and analyze it with multiple data preprocessing and machine learning algorithms.Conclusion: We demonstrate how the eNanoMapper database is used to import and publish online ENM and assay data from several data sources, how the “representational state

  7. Linking international trademark databases to inform IP research and policy

    Energy Technology Data Exchange (ETDEWEB)

    Petrie, P.

    2016-07-01

    Researchers and policy makers are concerned with many international issues regarding trademarks, such as trademark squatting, cluttering, and dilution. Trademark application data can provide an evidence base to inform government policy regarding these issues, and can also produce quantitative insights into economic trends and brand dynamics. Currently, national trademark databases can provide insight into economic and brand dynamics at the national level, but gaining such insight at an international level is more difficult due to a lack of internationally linked trademark data. We are in the process of building a harmonised international trademark database (the “Patstat of trademarks”), in which equivalent trademarks have been identified across national offices. We have developed a pilot database that incorporates 6.4 million U.S., 1.3 million Australian, and 0.5 million New Zealand trademark applications, spanning over 100 years. The database will be extended to incorporate trademark data from other participating intellectual property (IP) offices as they join the project. Confirmed partners include the United Kingdom, WIPO, and OHIM. We will continue to expand the scope of the project, and intend to include many more IP offices from around the world. In addition to building the pilot database, we have developed a linking algorithm that identifies equivalent trademarks (TMs) across the three jurisdictions. The algorithm can currently be applied to all applications that contain TM text; i.e. around 96% of all applications. In its current state, the algorithm successfully identifies ~ 97% of equivalent TMs that are known to be linked a priori, as they have shared international registration number through the Madrid protocol. When complete, the internationally linked trademark database will be a valuable resource for researchers and policy-makers in fields such as econometrics, intellectual property rights, and brand policy. (Author)

  8. TOMATOMICS: A Web Database for Integrated Omics Information in Tomato

    KAUST Repository

    Kudo, Toru

    2016-11-29

    Solanum lycopersicum (tomato) is an important agronomic crop and a major model fruit-producing plant. To facilitate basic and applied research, comprehensive experimental resources and omics information on tomato are available following their development. Mutant lines and cDNA clones from a dwarf cultivar, Micro-Tom, are two of these genetic resources. Large-scale sequencing data for ESTs and full-length cDNAs from Micro-Tom continue to be gathered. In conjunction with information on the reference genome sequence of another cultivar, Heinz 1706, the Micro-Tom experimental resources have facilitated comprehensive functional analyses. To enhance the efficiency of acquiring omics information for tomato biology, we have integrated the information on the Micro-Tom experimental resources and the Heinz 1706 genome sequence. We have also inferred gene structure by comparison of sequences between the genome of Heinz 1706 and the transcriptome, which are comprised of Micro-Tom full-length cDNAs and Heinz 1706 RNA-seq data stored in the KaFTom and Sequence Read Archive databases. In order to provide large-scale omics information with streamlined connectivity we have developed and maintain a web database TOMATOMICS (http://bioinf.mind.meiji.ac.jp/tomatomics/). In TOMATOMICS, access to the information on the cDNA clone resources, full-length mRNA sequences, gene structures, expression profiles and functional annotations of genes is available through search functions and the genome browser, which has an intuitive graphical interface.

  9. Integrating forensic information in a crime intelligence database.

    Science.gov (United States)

    Rossy, Quentin; Ioset, Sylvain; Dessimoz, Damien; Ribaux, Olivier

    2013-07-10

    Since 2008, intelligence units of six states of the western part of Switzerland have been sharing a common database for the analysis of high volume crimes. On a daily basis, events reported to the police are analysed, filtered and classified to detect crime repetitions and interpret the crime environment. Several forensic outcomes are integrated in the system such as matches of traces with persons, and links between scenes detected by the comparison of forensic case data. Systematic procedures have been settled to integrate links assumed mainly through DNA profiles, shoemarks patterns and images. A statistical outlook on a retrospective dataset of series from 2009 to 2011 of the database informs for instance on the number of repetition detected or confirmed and increased by forensic case data. Time needed to obtain forensic intelligence in regard with the type of marks treated, is seen as a critical issue. Furthermore, the underlying integration process of forensic intelligence into the crime intelligence database raised several difficulties in regards of the acquisition of data and the models used in the forensic databases. Solutions found and adopted operational procedures are described and discussed. This process form the basis to many other researches aimed at developing forensic intelligence models. Copyright © 2012 Elsevier Ireland Ltd. All rights reserved.

  10. Workshop Summary for Maintaining Innovation and Security in Biotechnology: Lessons Learned from Nuclear, Chemical, and Informational Technologies

    Energy Technology Data Exchange (ETDEWEB)

    Althouse, Paris [Lawrence Livermore National Lab. (LLNL), Livermore, CA (United States)

    2017-10-11

    In the fast-paced field of biotechnology where innovation has such far-reaching impacts on human health and the environment, dealing with the implications of possible illicit activities, accidents or unintended research consequences with potential detrimental societal impacts tends to remain in the background. While controls may be inevitable for the biotech industry, workshop attendees agreed that the way in which controls are implemented will play a major role in the agility and innovation of the biotechnology industry. There is little desire to slow down the pace of the gains while dealing with the security issues that arise. As was seen from the brief examinations of the Nuclear, Chemical, and Information Technology sectors explored in this workshop, establishing a regulatory regime needs to be a partnership between the public, corporate interests, scientists, and the government. Regulation is often written to combat perceived risk rather than actual risk—the public’s perceptions (occasionally even fictional portrayals) can spur regulatory efforts. This leads to the need for a thorough and continuing assessment of the risks posed by modern biotechnology. Inadequate or minimal risk assessment might expedite development in the short term but has potential negative long-term security and economic consequences. Industry and the technical community also often have a large role in setting regulatory policy, especially when well-crafted incentives are incorporated into the regulations. Such incentives might actually lead to enhanced innovation while poorly designed incentives can actually reduce safety and security. Any regulations should be as agile and flexible as the technology they regulate and when applied to biotechnologies they will need a new framework for thinking and implementing. The new framework should consider biotechnology as a technology and not simply a science since it is an extremely complex and adaptive system. This suggests the need to invest

  11. Informing Evidence Based Decisions: Usage Statistics for Online Journal Databases

    Directory of Open Access Journals (Sweden)

    Alexei Botchkarev

    2017-06-01

    Full Text Available Abstract Objective – The primary objective was to examine online journal database usage statistics for a provincial ministry of health in the context of evidence based decision-making. In addition, the study highlights implementation of the Journal Access Centre (JAC that is housed and powered by the Ontario Ministry of Health and Long-Term Care (MOHLTC to inform health systems policy-making. Methods – This was a prospective case study using descriptive analysis of the JAC usage statistics of journal articles from January 2009 to September 2013. Results – JAC enables ministry employees to access approximately 12,000 journals with full-text articles. JAC usage statistics for the 2011-2012 calendar years demonstrate a steady level of activity in terms of searches, with monthly averages of 5,129. In 2009-2013, a total of 4,759 journal titles were accessed including 1,675 journals with full-text. Usage statistics demonstrate that the actual consumption was over 12,790 full-text downloaded articles or approximately 2,700 articles annually. Conclusion – JAC’s steady level of activities, revealed by the study, reflects continuous demand for JAC services and products. It testifies that access to online journal databases has become part of routine government knowledge management processes. MOHLTC’s broad area of responsibilities with dynamically changing priorities translates into the diverse information needs of its employees and a large set of required journals. Usage statistics indicate that MOHLTC information needs cannot be mapped to a reasonably compact set of “core” journals with a subsequent subscription to those.

  12. SeedStor: A Germplasm Information Management System and Public Database.

    Science.gov (United States)

    Horler, R S P; Turner, A S; Fretter, P; Ambrose, M

    2018-01-01

    SeedStor (https://www.seedstor.ac.uk) acts as the publicly available database for the seed collections held by the Germplasm Resources Unit (GRU) based at the John Innes Centre, Norwich, UK. The GRU is a national capability supported by the Biotechnology and Biological Sciences Research Council (BBSRC). The GRU curates germplasm collections of a range of temperate cereal, legume and Brassica crops and their associated wild relatives, as well as precise genetic stocks, near-isogenic lines and mapping populations. With >35,000 accessions, the GRU forms part of the UK's plant conservation contribution to the Multilateral System (MLS) of the International Treaty for Plant Genetic Resources for Food and Agriculture (ITPGRFA) for wheat, barley, oat and pea. SeedStor is a fully searchable system that allows our various collections to be browsed species by species through to complicated multipart phenotype criteria-driven queries. The results from these searches can be downloaded for later analysis or used to order germplasm via our shopping cart. The user community for SeedStor is the plant science research community, plant breeders, specialist growers, hobby farmers and amateur gardeners, and educationalists. Furthermore, SeedStor is much more than a database; it has been developed to act internally as a Germplasm Information Management System that allows team members to track and process germplasm requests, determine regeneration priorities, handle cost recovery and Material Transfer Agreement paperwork, manage the Seed Store holdings and easily report on a wide range of the aforementioned tasks. © The Author(s) 2017. Published by Oxford University Press on behalf of Japanese Society of Plant Physiologists.

  13. Proteomics: A Biotechnology Tool for Crop Improvement

    Directory of Open Access Journals (Sweden)

    Moustafa eEldakak

    2013-02-01

    Full Text Available A sharp decline in the availability of arable land and sufficient supply of irrigation water along with a continuous steep increase in food demands have exerted a pressure on farmers to produce more with fewer resources. A viable solution to release this pressure is to speed up the plant breeding process by employing biotechnology in breeding programs. The majority of biotechnological applications rely on information generated from various -omic technologies. The latest outstanding improvements in proteomic platforms and many other but related advances in plant biotechnology techniques offer various new ways to encourage the usage of these technologies by plant scientists for crop improvement programs. A combinatorial approach of accelerated gene discovery through genomics, proteomics, and other associated -omic branches of biotechnology, as an applied approach, is proving to be an effective way to speed up the crop improvement programs worldwide. In the near future, swift improvements in -omic databases are becoming critical and demand immediate attention for the effective utilization of these techniques to produce next-generation crops for the progressive farmers. Here, we have reviewed the recent advances in proteomics, as tools of biotechnology, which are offering great promise and leading the path towards crop improvement for sustainable agriculture.

  14. TIDBIT - the INEL database of BNCT information and treatment

    International Nuclear Information System (INIS)

    Mancuso, C.A.

    1995-01-01

    The INEL Database of BNCT Information and Treatment (TIDBIT) has been under development for several years. Late in 1993, a new software development team took over the project and did and assessment of the current implementation status, and determined that the user interface was unsatisfactory for the expected users and that the data structures were out of step with the current state of reality. The team evaluated several tools that would improve the user interface to make the system easier to use. Uniface turned out to be the product of choice. During 1994, TIDBIT got its name, underwent a complete change of appearance, had a major overhaul to the data structures that support the application, and system documentation was begun. A prototype of the system was demonstrated in September 1994

  15. Databases

    Directory of Open Access Journals (Sweden)

    Nick Ryan

    2004-01-01

    Full Text Available Databases are deeply embedded in archaeology, underpinning and supporting many aspects of the subject. However, as well as providing a means for storing, retrieving and modifying data, databases themselves must be a result of a detailed analysis and design process. This article looks at this process, and shows how the characteristics of data models affect the process of database design and implementation. The impact of the Internet on the development of databases is examined, and the article concludes with a discussion of a range of issues associated with the recording and management of archaeological data.

  16. Multigenerational information: the example of the Icelandic Genealogy Database.

    Science.gov (United States)

    Tulinius, Hrafn

    2011-01-01

    The first part of the chapter describes the Icelandic Genealogical Database, how it was created, what it contains, and how it operates. In the second part, an overview of research accomplished with material from the database is given.

  17. Improved Information Retrieval Performance on SQL Database Using Data Adapter

    Science.gov (United States)

    Husni, M.; Djanali, S.; Ciptaningtyas, H. T.; Wicaksana, I. G. N. A.

    2018-02-01

    The NoSQL databases, short for Not Only SQL, are increasingly being used as the number of big data applications increases. Most systems still use relational databases (RDBs), but as the number of data increases each year, the system handles big data with NoSQL databases to analyze and access data more quickly. NoSQL emerged as a result of the exponential growth of the internet and the development of web applications. The query syntax in the NoSQL database differs from the SQL database, therefore requiring code changes in the application. Data adapter allow applications to not change their SQL query syntax. Data adapters provide methods that can synchronize SQL databases with NotSQL databases. In addition, the data adapter provides an interface which is application can access to run SQL queries. Hence, this research applied data adapter system to synchronize data between MySQL database and Apache HBase using direct access query approach, where system allows application to accept query while synchronization process in progress. From the test performed using data adapter, the results obtained that the data adapter can synchronize between SQL databases, MySQL, and NoSQL database, Apache HBase. This system spends the percentage of memory resources in the range of 40% to 60%, and the percentage of processor moving from 10% to 90%. In addition, from this system also obtained the performance of database NoSQL better than SQL database.

  18. Information literacy skills and accessibility of databases among ...

    African Journals Online (AJOL)

    Previous researches on the accessibility of Databases by Undergraduate Students of Umaru Musa Yar'adua University (UMYU) have found out that there was low level of accessibility of library databases. This paper investigates the further factors of the accessibility of databases among Undergraduate Students of Umaru ...

  19. search GenBank: interactive orchestration and ad-hoc choreography of Web services in the exploration of the biomedical resources of the National Center For Biotechnology Information.

    Science.gov (United States)

    Mrozek, Dariusz; Małysiak-Mrozek, Bożena; Siążnik, Artur

    2013-03-01

    Due to the growing number of biomedical entries in data repositories of the National Center for Biotechnology Information (NCBI), it is difficult to collect, manage and process all of these entries in one place by third-party software developers without significant investment in hardware and software infrastructure, its maintenance and administration. Web services allow development of software applications that integrate in one place the functionality and processing logic of distributed software components, without integrating the components themselves and without integrating the resources to which they have access. This is achieved by appropriate orchestration or choreography of available Web services and their shared functions. After the successful application of Web services in the business sector, this technology can now be used to build composite software tools that are oriented towards biomedical data processing. We have developed a new tool for efficient and dynamic data exploration in GenBank and other NCBI databases. A dedicated search GenBank system makes use of NCBI Web services and a package of Entrez Programming Utilities (eUtils) in order to provide extended searching capabilities in NCBI data repositories. In search GenBank users can use one of the three exploration paths: simple data searching based on the specified user's query, advanced data searching based on the specified user's query, and advanced data exploration with the use of macros. search GenBank orchestrates calls of particular tools available through the NCBI Web service providing requested functionality, while users interactively browse selected records in search GenBank and traverse between NCBI databases using available links. On the other hand, by building macros in the advanced data exploration mode, users create choreographies of eUtils calls, which can lead to the automatic discovery of related data in the specified databases. search GenBank extends standard capabilities of the

  20. The Animal Genetic Resource Information Network (AnimalGRIN) Database: A Database Design & Implementation Case

    Science.gov (United States)

    Irwin, Gretchen; Wessel, Lark; Blackman, Harvey

    2012-01-01

    This case describes a database redesign project for the United States Department of Agriculture's National Animal Germplasm Program (NAGP). The case provides a valuable context for teaching and practicing database analysis, design, and implementation skills, and can be used as the basis for a semester-long team project. The case demonstrates the…

  1. Sports Information Online: Searching the SPORT Database and Tips for Finding Sports Medicine Information Online.

    Science.gov (United States)

    Janke, Richard V.; And Others

    1988-01-01

    The first article describes SPORT, a database providing international coverage of athletics and physical education, and compares it to other online services in terms of coverage, thesauri, possible search strategies, and actual usage. The second article reviews available online information on sports medicine. (CLB)

  2. The information highways of a biotechnological workhorse – signal transduction in Hypocrea jecorina

    Directory of Open Access Journals (Sweden)

    Schmoll Monika

    2008-09-01

    Full Text Available Abstract Background The ascomycete Hypocrea jecorina (anamorph Trichoderma reesei is one of the most prolific producers of biomass-degrading enzymes and frequently termed an industrial workhorse. To compete for nutrients in its habitat despite its shortcoming in certain degradative enzymes, efficient perception and interpretation of environmental signals is indispensable. A better understanding of these signals as well as their transmission machinery can provide sources for improvement of biotechnological processes. Results The genome of H. jecorina was analysed for the presence and composition of common signal transduction pathways including heterotrimeric G-protein cascades, cAMP signaling, mitogen activated protein kinases, two component phosphorelay systems, proteins involved in circadian rhythmicity and light response, calcium signaling and the superfamily of Ras small GTPases. The results of this survey are discussed in the context of current knowledge in order to assess putative functions as well as potential impact of alterations of the respective pathways. Conclusion Important findings include an additional, bacterial type phospholipase C protein and an additional 6-4 photolyase. Moreover the presence of 4 RGS-(Regulator of G-protein Signaling proteins and 3 GprK-type G-protein coupled receptors comprising an RGS-domain suggest a more complex posttranslational regulation of G-protein signaling than in other ascomycetes. Also the finding, that H. jecorina, unlike yeast possesses class I phosducins which are involved in phototransduction in mammals warrants further investigation. An alteration in the regulation of circadian rhythmicity may be deduced from the extension of both the class I and II of casein kinases, homologues of which are implicated in phosphorylation of FRQ in Neurospora crassa. On the other hand, a shortage in the number of the pathogenicity related PTH11-type G-protein coupled receptors (GPCRs as well as a lack of

  3. A database for coconut crop improvement.

    Science.gov (United States)

    Rajagopal, Velamoor; Manimekalai, Ramaswamy; Devakumar, Krishnamurthy; Rajesh; Karun, Anitha; Niral, Vittal; Gopal, Murali; Aziz, Shamina; Gunasekaran, Marimuthu; Kumar, Mundappurathe Ramesh; Chandrasekar, Arumugam

    2005-12-08

    Coconut crop improvement requires a number of biotechnology and bioinformatics tools. A database containing information on CG (coconut germplasm), CCI (coconut cultivar identification), CD (coconut disease), MIFSPC (microbial information systems in plantation crops) and VO (vegetable oils) is described. The database was developed using MySQL and PostgreSQL running in Linux operating system. The database interface is developed in PHP, HTML and JAVA. http://www.bioinfcpcri.org.

  4. Database versioning and its implementation in geoscience information systems

    Science.gov (United States)

    Le, Hai Ha; Schaeben, Helmut; Jasper, Heinrich; Görz, Ines

    2014-09-01

    Many different versions of geoscience data concurrently exist in a database for different geological paradigms, source data, and authors. The aim of this study is to manage these versions in a database management system. Our data include geological surfaces, which are triangulated meshes in this study. Unlike revision/version/source control systems, our data are stored in a central database without local copies. The main contributions of this study include (1) a data model with input/output/manage functions, (2) a mesh comparison function, (3) a version merging strategy, and (4) the implementation of all of the concepts in PostgreSQL and gOcad. The software has been tested using synthetic surfaces and a simple tectonic model of a deformed stratigraphic horizon.

  5. A Case for Teaching Biotechnology

    Science.gov (United States)

    Lazaros, Edward; Embree, Caleb

    2016-01-01

    Biotechnology is an innovative field that is consistently growing in popularity. It is important that students are taught about this technology at an early age, so they are motivated to join the field, or at least motivated to become informed citizens and consumers (Gonzalez, et al, 2013). An increase in biotechnology knowledge can result in an…

  6. Biotechnology bibliographies

    Energy Technology Data Exchange (ETDEWEB)

    Beaudette, L.A.; McCready, R.G.L.

    1986-01-01

    This bibliography consists of articles and scientific papers on biotechnology in areas in which BIOMINET is currently involved. The reports are categorized in four areas: 1) acid mine drainage (coals and metals) and bioadsorption of metals; 2) solution mining; 3) metabolism and physiology of Thiobacillus and other microorganisms; and 4) bacterial leaching of metals.

  7. 16th East-European Conference on Advances in Databases and Information Systems (ADBIS 2012)

    CERN Document Server

    Härder, Theo; Wrembel, Robert; Advances in Databases and Information Systems

    2013-01-01

    This volume is the second one of the 16th East-European Conference on Advances in Databases and Information Systems (ADBIS 2012), held on September 18-21, 2012, in Poznań, Poland. The first one has been published in the LNCS series.   This volume includes 27 research contributions, selected out of 90. The contributions cover a wide spectrum of topics in the database and information systems field, including: database foundation and theory, data modeling and database design, business process modeling, query optimization in relational and object databases, materialized view selection algorithms, index data structures, distributed systems, system and data integration, semi-structured data and databases, semantic data management, information retrieval, data mining techniques, data stream processing, trust and reputation in the Internet, and social networks. Thus, the content of this volume covers the research areas from fundamentals of databases, through still hot topic research problems (e.g., data mining, XML ...

  8. Commercialization of animal biotechnology.

    Science.gov (United States)

    Faber, D C; Molina, J A; Ohlrichs, C L; Vander Zwaag, D F; Ferré, L B

    2003-01-01

    Commercialization of animal biotechnology is a wide-ranging topic for discussion. In this paper, we will attempt to review embryo transfer (ET) and related technologies that relate to food-producing mammals. A brief review of the history of advances in biotechnology will provide a glimpse to present and future applications. Commercialization of animal biotechnology is presently taking two pathways. The first application involves the use of animals for biomedical purposes. Very few companies have developed all of the core competencies and intellectual properties to complete the bridge from lab bench to product. The second pathway of application is for the production of animals used for food. Artificial insemination (AI), embryo transfer, in vitro fertilization (IVF), cloning, transgenics, and genomics all are components of the toolbox for present and future applications. Individually, these are powerful tools capable of providing significant improvements in productivity. Combinations of these technologies coupled with information systems and data analysis, will provide even more significant change in the next decade. Any strategies for the commercial application of animal biotechnology must include a careful review of regulatory and social concerns. Careful review of industry infrastructure is also important. Our colleagues in plant biotechnology have helped highlight some of these pitfalls and provide us with a retrospective review. In summary, today we have core competencies that provide a wealth of opportunities for the members of this society, commercial companies, producers, and the general population. Successful commercialization will benefit all of the above stakeholders. Copyright 2002 Elsevier Science Inc.

  9. Ebolavirus Database: Gene and Protein Information Resource for Ebolaviruses

    Directory of Open Access Journals (Sweden)

    Rayapadi G. Swetha

    2016-01-01

    Full Text Available Ebola Virus Disease (EVD is a life-threatening haemorrhagic fever in humans. Even though there are many reports on EVD, the protein precursor functions and virulent factors of ebolaviruses remain poorly understood. Comparative analyses of Ebolavirus genomes will help in the identification of these important features. This prompted us to develop the Ebolavirus Database (EDB and we have provided links to various tools that will aid researchers to locate important regions in both the genomes and proteomes of Ebolavirus. The genomic analyses of ebolaviruses will provide important clues for locating the essential and core functional genes. The aim of EDB is to act as an integrated resource for ebolaviruses and we strongly believe that the database will be a useful tool for clinicians, microbiologists, health care workers, and bioscience researchers.

  10. Integrating forensic information in a crime intelligence database

    OpenAIRE

    Rossy, Q.; Ioset, S.; Dessimoz, D.; Ribaux, O.

    2013-01-01

    Since 2008, Intelligence units of six states of the western part of Switzerland have been sharing a common database for the analysis of high volume crimes. On a daily basis, events reported to the police are analysed, filtered and classified to detect crime repetitions and interpret the crime environment. Several forensic outcomes are integrated in the system such as matches of traces with persons, and links between scenes detected by the comparison of forensic case data. Systematic procedure...

  11. GOBASE--a database of organelle and bacterial genome information.

    Science.gov (United States)

    O'Brien, Emmet A; Zhang, Yue; Yang, LiuSong; Wang, Eric; Marie, Veronique; Lang, B Franz; Burger, Gertraud

    2006-01-01

    The organelle genome database GOBASE is now in its twelfth release, and includes 350,000 mitochondrial sequences and 118,000 chloroplast sequences, roughly a 3-fold expansion since previously documented. GOBASE also includes a fully reannotated genome sequence of Rickettsia prowazekii, one of the closest bacterial relatives of mitochondria, and will shortly expand to contain more data from bacteria from which organelles originated. All these sequences are now accessible through a single unified interface. Enhancements to the functionality of GOBASE include addition of pages for RNA structures and a page compiling data about the taxonomic distribution of organelle-encoded genes; incorporation of Gene Ontology terms; addition of features deduced from incomplete annotations to sequences in GenBank; marking of type examples in cases where single genes in single species are oversampled within GenBank; and addition of graphics illustrating gene structure and the position of neighbouring genes on a sequence. The database has been reimplemented in PostgreSQL to facilitate development and maintenance, and structural modifications have been made to speed up queries, particularly those related to taxonomy. The GOBASE database can be queried at http://gobase.bcm.umontreal.ca/ and inquiries should be directed to gobase@bch.umontreal.ca.

  12. GOBASE—a database of organelle and bacterial genome information

    Science.gov (United States)

    O'Brien, Emmet A.; Zhang, Yue; Yang, LiuSong; Wang, Eric; Marie, Veronique; Lang, B. Franz; Burger, Gertraud

    2006-01-01

    The organelle genome database GOBASE is now in its twelfth release, and includes 350 000 mitochondrial sequences and 118 000 chloroplast sequences, roughly a 3-fold expansion since previously documented. GOBASE also includes a fully reannotated genome sequence of Rickettsia prowazekii, one of the closest bacterial relatives of mitochondria, and will shortly expand to contain more data from bacteria from which organelles originated. All these sequences are now accessible through a single unified interface. Enhancements to the functionality of GOBASE include addition of pages for RNA structures and a page compiling data about the taxonomic distribution of organelle-encoded genes; incorporation of Gene Ontology terms; addition of features deduced from incomplete annotations to sequences in GenBank; marking of type examples in cases where single genes in single species are oversampled within GenBank; and addition of graphics illustrating gene structure and the position of neighbouring genes on a sequence. The database has been reimplemented in PostgreSQL to facilitate development and maintenance, and structural modifications have been made to speed up queries, particularly those related to taxonomy. The GOBASE database can be queried at and inquiries should be directed to gobase@bch.umontreal.ca. PMID:16381962

  13. 75 FR 29155 - Publicly Available Consumer Product Safety Information Database

    Science.gov (United States)

    2010-05-24

    ... could include the name (including the brand name) of the product. Other information, such as where the... would tie the ``substantially erroneous or substantially mistaken'' element to required information in a...'' element to information in a manufacturer or private labeler comment that creates a substantially erroneous...

  14. Impact of Prior Knowledge of Informational Content and Organization on Learning Search Principles in a Database.

    Science.gov (United States)

    Linde, Lena; Bergstrom, Monica

    1988-01-01

    The importance of prior knowledge of informational content and organization for search performance on a database was evaluated for 17 undergraduates. Pretraining related to content, and information did facilitate learning logical search principles in a relational database; contest pretraining was more efficient. (SLD)

  15. A database-informed approach to new plant shielding design

    International Nuclear Information System (INIS)

    Lloyd, T. M.

    2011-01-01

    Document available in abstract form only, full text of document follows: To facilitate the definition and description of radiation dose rates in the numerous rooms and areas of a new nuclear power plant, a database approach was developed. This approach offers a number of benefits over more manual methods. A key benefit is that the selection of an appropriate shielding method to use in each area of the plant is greatly facilitated by virtue of the team's improved ability to grasp the significance of each of the individual sources that are candidates for making a significant contribution to the dose rate in each area. By understanding the level of relevant contribution - if any - of each of these candidate sources, an analyst is able to select a method that will define the contribution without becoming enmired in a model representing inappropriately high degrees of accuracy and modeling time. This database method, by allowing for an evolving understanding of dose rates and sources in the neighboring rooms for each portion of the plant, leads to substantial reductions in the effort of characterizing a plant's radiation environment. As an additional benefit, the database serves as a tool for documenting the shielding calculations themselves, automatically generating formatted sections including drawing and source term references, shielding calculation types, key dimensions, and results; these sections can form the starting point of a full calculation package. The approach offers a final project management benefit: estimating, tracking, and predicting the effort associated with the many calculations involved in such a project are greatly systematized, leading to more reliable manpower estimates. (authors)

  16. A dangerous cocktail: databases, information techniques and lack of visions

    DEFF Research Database (Denmark)

    Tarp, Sven

    2018-01-01

    fully to the new technologies and get rid of old habits and ways of thinking. The article provides some examples of how the current challenges can be approached in terms of databases, user interfaces and other tools and techniques to assist the compilation and presentation of online dictionaries....... In this context, it also calls for the opening of new areas of research into the empirical basis of dictionary production. The contribution defends the need for a lexicographical theory and a theory-based methodology which should be combined with visions on how lexicography and technology can be integrated...

  17. 18th East European Conference on Advances in Databases and Information Systems and Associated Satellite Events

    CERN Document Server

    Ivanovic, Mirjana; Kon-Popovska, Margita; Manolopoulos, Yannis; Palpanas, Themis; Trajcevski, Goce; Vakali, Athena

    2015-01-01

    This volume contains the papers of 3 workshops and the doctoral consortium, which are organized in the framework of the 18th East-European Conference on Advances in Databases and Information Systems (ADBIS’2014). The 3rd International Workshop on GPUs in Databases (GID’2014) is devoted to subjects related to utilization of Graphics Processing Units in database environments. The use of GPUs in databases has not yet received enough attention from the database community. The intention of the GID workshop is to provide a discussion on popularizing the GPUs and providing a forum for discussion with respect to the GID’s research ideas and their potential to achieve high speedups in many database applications. The 3rd International Workshop on Ontologies Meet Advanced Information Systems (OAIS’2014) has a twofold objective to present: new and challenging issues in the contribution of ontologies for designing high quality information systems, and new research and technological developments which use ontologie...

  18. Advances in probabilistic databases for uncertain information management

    CERN Document Server

    Yan, Li

    2013-01-01

    This book covers a fast-growing topic in great depth and focuses on the technologies and applications of probabilistic data management. It aims to provide a single account of current studies in probabilistic data management. The objective of the book is to provide the state of the art information to researchers, practitioners, and graduate students of information technology of intelligent information processing, and at the same time serving the information technology professional faced with non-traditional applications that make the application of conventional approaches difficult or impossible.

  19. Development of biotechnology in India.

    Science.gov (United States)

    Ghose, T K; Bisaria, V S

    2000-01-01

    technology, industrial biotechnology, biochemical engineering and associated activities such as creation of biotechnology information system and national repositories. Current status of intellectual property rights has also been discussed. Contribution to the India's advances in biotechnology by the industry, excepting a limited few, has been far below expectations. The review concludes with some cautious notes.

  20. 7th Asian Conference on Intelligent Information and Database Systems (ACIIDS 2015)

    CERN Document Server

    Nguyen, Ngoc; Batubara, John; New Trends in Intelligent Information and Database Systems

    2015-01-01

    Intelligent information and database systems are two closely related subfields of modern computer science which have been known for over thirty years. They focus on the integration of artificial intelligence and classic database technologies to create the class of next generation information systems. The book focuses on new trends in intelligent information and database systems and discusses topics addressed to the foundations and principles of data, information, and knowledge models, methodologies for intelligent information and database systems analysis, design, and implementation, their validation, maintenance and evolution. They cover a broad spectrum of research topics discussed both from the practical and theoretical points of view such as: intelligent information retrieval, natural language processing, semantic web, social networks, machine learning, knowledge discovery, data mining, uncertainty management and reasoning under uncertainty, intelligent optimization techniques in information systems, secu...

  1. Avian Biotechnology.

    Science.gov (United States)

    Nakamura, Yoshiaki

    2017-01-01

    Primordial germ cells (PGCs) generate new individuals through differentiation, maturation and fertilization. This means that the manipulation of PGCs is directly linked to the manipulation of individuals, making PGCs attractive target cells in the animal biotechnology field. A unique biological property of avian PGCs is that they circulate temporarily in the vasculature during early development, and this allows us to access and manipulate avian germ lines. Following the development of a technique for transplantation, PGCs have become central to avian biotechnology, in contrast to the use of embryo manipulation and subsequent transfer to foster mothers, as in mammalian biotechnology. Today, avian PGC transplantation combined with recent advanced manipulation techniques, including cell purification, cryopreservation, depletion, and long-term culture in vitro, have enabled the establishment of genetically modified poultry lines and ex-situ conservation of poultry genetic resources. This chapter introduces the principles, history, and procedures of producing avian germline chimeras by transplantation of PGCs, and the current status of avian germline modification as well as germplasm cryopreservation. Other fundamental avian reproductive technologies are described, including artificial insemination and embryo culture, and perspectives of industrial applications in agriculture and pharmacy are considered, including poultry productivity improvement, egg modification, disease resistance impairment and poultry gene "pharming" as well as gene banking.

  2. Availability and Utilization of Electronic Information Databases by ...

    African Journals Online (AJOL)

    A number of factors that affect the provision and use of electronic information resources in the Agricultural Complex such as, power outages, slow Internet services and insufficient computers were highlighted. The study concluded that greater publicity need to be given to the many and varied sources of research information ...

  3. Information systems in radiation protection: the INIS database

    International Nuclear Information System (INIS)

    Alberdi Larranaga, I.; Marco Arboli, M.

    2011-01-01

    INIS provides a comprehensive service references on literature information on radiation protection (RP), nuclear science and technology, medicine, etc.., Processing most of the world's scientific and technical literature in the area to meet the information needs international community in the areas of interest of the IAEA and the activities related to peaceful use of nuclear science and technology.

  4. Stemcell Information: SKIP000576 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available of Medicine, University of Tokyo Mineo Kurowaka Mineo Kurowaka Information Only ... 24859480 10.1016/j.exphem.2014.03.010 Generati...on of induced pluripotent stem cells derived from primary and secondary myelofibros

  5. Information Assurance Intrusion Detection Sensor Database Design: Lessons Learned

    National Research Council Canada - National Science Library

    Spink, Brian

    2001-01-01

    Current architectural trends in information assurance for the DOD focuses on the fusion and correlation of large volumes of data collected across several intrusion detection systems and boundary devices...

  6. Stemcell Information: SKIP000920 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available atava Department of Molecular Medicine, Mayo Clinic Department of Molecular Medici...ne, Mayo Clinic ... Information Only Department of Molecular Medicine, Mayo Clinic Department of Molecular Medici

  7. A 3-D terrain visualization database for highway information management

    Science.gov (United States)

    1999-07-26

    A Multimedia based Highway Information System (MMHIS) is described in the paper to improve the existing photologging system for various operation and management needs. The full digital, computer based MMHIS uses technologies of video, multimedia data...

  8. Field validation of food service listings: a comparison of commercial and online geographic information system databases.

    Science.gov (United States)

    Seliske, Laura; Pickett, William; Bates, Rebecca; Janssen, Ian

    2012-08-01

    Many studies examining the food retail environment rely on geographic information system (GIS) databases for location information. The purpose of this study was to validate information provided by two GIS databases, comparing the positional accuracy of food service places within a 1 km circular buffer surrounding 34 schools in Ontario, Canada. A commercial database (InfoCanada) and an online database (Yellow Pages) provided the addresses of food service places. Actual locations were measured using a global positioning system (GPS) device. The InfoCanada and Yellow Pages GIS databases provided the locations for 973 and 675 food service places, respectively. Overall, 749 (77.1%) and 595 (88.2%) of these were located in the field. The online database had a higher proportion of food service places found in the field. The GIS locations of 25% of the food service places were located within approximately 15 m of their actual location, 50% were within 25 m, and 75% were within 50 m. This validation study provided a detailed assessment of errors in the measurement of the location of food service places in the two databases. The location information was more accurate for the online database, however, when matching criteria were more conservative, there were no observed differences in error between the databases.

  9. Information structure design for databases a practical guide to data modelling

    CERN Document Server

    Mortimer, Andrew J

    2014-01-01

    Computer Weekly Professional Series: Information Structure Design for Databases: A Practical Guide to Data modeling focuses on practical data modeling covering business and information systems. The publication first offers information on data and information, business analysis, and entity relationship model basics. Discussions cover degree of relationship symbols, relationship rules, membership markers, types of information systems, data driven systems, cost and value of information, importance of data modeling, and quality of information. The book then takes a look at entity relationship mode

  10. Stemcell Information: SKIP000514 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available 岡野 栄之 Department of Physiology, Keio University School of Medicine 慶應義塾大学 医学部 生理学教室 Department of Physiology..., Keio University School of Medicine 慶應義塾大学 医学部 生理学教室 Hideyuki Okano 岡野 栄之 Inform...ation Only Department of Physiology, Keio University School of Medicine 慶應義塾大学 医学部 生理学教室 ... 23039195--2493

  11. Stemcell Information: SKIP001065 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available boratory of Regenerative Biology, South China Institute for Stem Cell Biology and Regenerative Medicine Key ...Laboratory of Regenerative Biology, South China Institute for Stem Cell Biology a...nd Regenerative Medicine ... Information Only Key Laboratory of Regenerative Biology, South China Institute for Stem Cell Biology... and Regenerative Medicine Key Laboratory of Regenerative Biology, South China Institute for Stem Cell Biology

  12. Stemcell Information: SKIP000673 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available ular and Molecular Medicine, Children's Hospital Boston Immune Disease Institute,... Program in Cellular and Molecular Medicine, Children's Hospital Boston Derrick J. Rossi Derrick J. Rossi In...formation Only Immune Disease Institute, Program in Cellular and Molecular Medicine, Children's Hospital Bos...ton Immune Disease Institute, Program in Cellular and Molecular Medicine, Children's Hospital Boston ... 20

  13. Stemcell Information: SKIP000680 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available am in Cellular and Molecular Medicine, Children's Hospital Boston Immune Disease Institute, Program in Cellu...lar and Molecular Medicine, Children's Hospital Boston Derrick J. Rossi Derrick J.... Rossi Information Only Immune Disease Institute, Program in Cellular and Molecular Medicine, Children's Ho...spital Boston Immune Disease Institute, Program in Cellular and Molecular Medicine, Children's Hospital Bost

  14. Stemcell Information: SKIP000668 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available itute, Program in Cellular and Molecular Medicine, Children's Hospital Boston Imm...une Disease Institute, Program in Cellular and Molecular Medicine, Children's Hospital Boston Derrick J. Ros...si Derrick J. Rossi Information Only Immune Disease Institute, Program in Cellular and Molecular Medicine, Children...'s Hospital Boston Immune Disease Institute, Program in Cellular and Molecular Medicine, Children's H

  15. Stemcell Information: SKIP000672 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available lar and Molecular Medicine, Children's Hospital Boston Immune Disease Institute, ...Program in Cellular and Molecular Medicine, Children's Hospital Boston Derrick J. Rossi Derrick J. Rossi Inf...ormation Only Immune Disease Institute, Program in Cellular and Molecular Medicine, Children's Hospital Bost...on Immune Disease Institute, Program in Cellular and Molecular Medicine, Children's Hospital Boston ... 208

  16. Stemcell Information: SKIP000690 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available , Program in Cellular and Molecular Medicine, Children's Hospital Boston Immune Disease Institute, Program i...n Cellular and Molecular Medicine, Children's Hospital Boston Derrick J. Rossi De...rrick J. Rossi Information Only Immune Disease Institute, Program in Cellular and Molecular Medicine, Children...'s Hospital Boston Immune Disease Institute, Program in Cellular and Molecular Medicine, Children's Hospit

  17. Stemcell Information: SKIP000667 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available te, Program in Cellular and Molecular Medicine, Children's Hospital Boston Immune... Disease Institute, Program in Cellular and Molecular Medicine, Children's Hospital Boston Derrick J. Rossi ...Derrick J. Rossi Information Only Immune Disease Institute, Program in Cellular and Molecular Medicine, Children...'s Hospital Boston Immune Disease Institute, Program in Cellular and Molecular Medicine, Children's Hosp

  18. Stemcell Information: SKIP000692 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available ... Immune Disease Institute, Program in Cellular and Molecular Medicine, Children's Hospital Boston Immune Di...sease Institute, Program in Cellular and Molecular Medicine, Children's Hospital ...ren's Hospital Boston Immune Disease Institute, Program in Cellular and Molecular Medicine, Children...Boston Derrick J. Rossi Derrick J. Rossi Information Only Immune Disease Institute, Program in Cellular and Molecular Medicine, Child

  19. Stemcell Information: SKIP000691 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available te, Program in Cellular and Molecular Medicine, Children's Hospital Boston Immune Disease Institute, Program... in Cellular and Molecular Medicine, Children's Hospital Boston Derrick J. Rossi ...Derrick J. Rossi Information Only Immune Disease Institute, Program in Cellular and Molecular Medicine, Children...'s Hospital Boston Immune Disease Institute, Program in Cellular and Molecular Medicine, Children's Hosp

  20. Stemcell Information: SKIP000694 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available outhern blot analysis Yes ... Rudolf Jaenisch Rudolf Jaenisch Whitehead Institute for Biomedical Research Whi...tehead Institute for Biomedical Research Whitehead Institute for Biomedical Research Whitehead Institute for Biomedical... Research Rudolf Jaenisch Rudolf Jaenisch Information Only Whitehead Institute for Biomedical Res...earch Whitehead Institute for Biomedical Research ... 24936472 10.1016/j.stemcr.

  1. Stemcell Information: SKIP000697 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available Southern blot analysis Yes ... Rudolf Jaenisch Rudolf Jaenisch Whitehead Institute for Biomedical Research W...hitehead Institute for Biomedical Research Whitehead Institute for Biomedical Research Whitehead Institute for Biomedical... Research Rudolf Jaenisch Rudolf Jaenisch Information Only Whitehead Institute for Biomedical R...esearch Whitehead Institute for Biomedical Research ... 24936472 10.1016/j.stemc

  2. Stemcell Information: SKIP000699 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available lf Jaenisch Whitehead Institute for Biomedical Research Whitehead Institute for Biomedical Research Whitehead Institute for Biomedica...l Research Whitehead Institute for Biomedical Research R...udolf Jaenisch Rudolf Jaenisch Information Only Whitehead Institute for Biomedical Research Whitehead Institute for Biomedical

  3. Stemcell Information: SKIP000978 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available qRT-PCR Rudolf Jaenisch Rudolf Jaenisch Whitehead Institute for Biomedical Research Whitehead Institute for Biomedical... Research Whitehead Institute for Biomedical Research Whitehead Institute for Biomedical Research ...Rudolf Jaenisch Rudolf Jaenisch Information Only Whitehead Institute for Biomedical... Research Whitehead Institute for Biomedical Research ... 24936472 10.1016/j.stemcr.2014.03.014 Genetic a

  4. Stemcell Information: SKIP000982 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available RT-PCR Rudolf Jaenisch Rudolf Jaenisch Whitehead Institute for Biomedical Researc...h Whitehead Institute for Biomedical Research Whitehead Institute for Biomedical Research Whitehead Institute for Biomedical... Research Rudolf Jaenisch Rudolf Jaenisch Information Only Whitehead Institute for Biomedical... Research Whitehead Institute for Biomedical Research ... 24936472 10.1016/j.st

  5. Stemcell Information: SKIP000980 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available es ... Yes qRT-PCR Rudolf Jaenisch Rudolf Jaenisch Whitehead Institute for Biomedical... Research Whitehead Institute for Biomedical Research Whitehead Institute for Biomedical Research Whitehead Institute for Biomedical... Research Rudolf Jaenisch Rudolf Jaenisch Information Only Whitehead Institute for Biomedical... Research Whitehead Institute for Biomedical Research ... 24936472 10.1016/j.stemcr.2014.03.014 G

  6. Stemcell Information: SKIP000979 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available ot analysis Yes ... Yes qRT-PCR Rudolf Jaenisch Rudolf Jaenisch Whitehead Institute for Biomedical... Research Whitehead Institute for Biomedical Research Whitehead Institute for Biomedical Resea...rch Whitehead Institute for Biomedical Research Rudolf Jaenisch Rudolf Jaenisch Information Only Whitehead Institute for Biomedical... Research Whitehead Institute for Biomedical Research ... 24936472 10.1016/j.stemcr.

  7. Stemcell Information: SKIP000977 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available qRT-PCR Rudolf Jaenisch Rudolf Jaenisch Whitehead Institute for Biomedical Research Whitehead Institute for Biomedical... Research Whitehead Institute for Biomedical Research Whitehead Institute for Biomedical Research ...Rudolf Jaenisch Rudolf Jaenisch Information Only Whitehead Institute for Biomedical... Research Whitehead Institute for Biomedical Research ... 24936472 10.1016/j.stemcr.2014.03.014 Genetic a

  8. Stemcell Information: SKIP000976 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available Jaenisch Rudolf Jaenisch Whitehead Institute for Biomedical Research Whitehead Institute for Biomedical Rese...arch Whitehead Institute for Biomedical Research Whitehead Institute for Biomedical Research Rudolf Jaenisch... Rudolf Jaenisch Information Only Whitehead Institute for Biomedical Research Whi...tehead Institute for Biomedical Research ... 24936472 10.1016/j.stemcr.2014.03.014 Genetic and chemical cor

  9. Stemcell Information: SKIP000975 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available Jaenisch Rudolf Jaenisch Whitehead Institute for Biomedical Research Whitehead Institute for Biomedical Rese...arch Whitehead Institute for Biomedical Research Whitehead Institute for Biomedical Research Rudolf Jaenisch... Rudolf Jaenisch Information Only Whitehead Institute for Biomedical Research Whi...tehead Institute for Biomedical Research ... 24936472 10.1016/j.stemcr.2014.03.014 Genetic and chemical cor

  10. Stemcell Information: SKIP000695 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available outhern blot analysis Yes ... Rudolf Jaenisch Rudolf Jaenisch Whitehead Institute for Biomedical Research Whi...tehead Institute for Biomedical Research Whitehead Institute for Biomedical Research Whitehead Institute for Biomedical... Research Rudolf Jaenisch Rudolf Jaenisch Information Only Whitehead Institute for Biomedical Res...earch Whitehead Institute for Biomedical Research ... 24936472 10.1016/j.stemcr.

  11. Stemcell Information: SKIP000700 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available lf Jaenisch Whitehead Institute for Biomedical Research Whitehead Institute for Biomedical Research Whitehead Institute for Biomedica...l Research Whitehead Institute for Biomedical Research R...udolf Jaenisch Rudolf Jaenisch Information Only Whitehead Institute for Biomedical Research Whitehead Institute for Biomedical

  12. Stemcell Information: SKIP000983 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available RT-PCR Rudolf Jaenisch Rudolf Jaenisch Whitehead Institute for Biomedical Researc...h Whitehead Institute for Biomedical Research Whitehead Institute for Biomedical Research Whitehead Institute for Biomedical... Research Rudolf Jaenisch Rudolf Jaenisch Information Only Whitehead Institute for Biomedical... Research Whitehead Institute for Biomedical Research ... 24936472 10.1016/j.st

  13. Stemcell Information: SKIP000696 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available outhern blot analysis Yes ... Rudolf Jaenisch Rudolf Jaenisch Whitehead Institute for Biomedical Research Whi...tehead Institute for Biomedical Research Whitehead Institute for Biomedical Research Whitehead Institute for Biomedical... Research Rudolf Jaenisch Rudolf Jaenisch Information Only Whitehead Institute for Biomedical Res...earch Whitehead Institute for Biomedical Research ... 24936472 10.1016/j.stemcr.

  14. Stemcell Information: SKIP000981 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available RT-PCR Rudolf Jaenisch Rudolf Jaenisch Whitehead Institute for Biomedical Researc...h Whitehead Institute for Biomedical Research Whitehead Institute for Biomedical Research Whitehead Institute for Biomedical... Research Rudolf Jaenisch Rudolf Jaenisch Information Only Whitehead Institute for Biomedical... Research Whitehead Institute for Biomedical Research ... 24936472 10.1016/j.st

  15. Stemcell Information: SKIP000918 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available a Thatava Tayaramma Thatava Department of Molecular Medicine, Mayo Clinic Department of Molecular Medici...ne, Mayo Clinic ... Information Only Department of Molecular Medicine, Mayo Clinic Department of Molecular Med...icine, Mayo Clinic ... 22142803 10.1186/scrt89 Successful disease-specific induced

  16. Stemcell Information: SKIP000303 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available ... No ... No ... No No No ... Edwin M Stone Edwin M Stone University of Iowa Carver College of Medicine University ...of Iowa Carver College of Medicine ... Information Only University of Iowa Carver College of Medicine Univer...sity of Iowa Carver College of Medicine ... 23991284 10.7554/eLife.00824 Patient

  17. Stemcell Information: SKIP000916 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available ormation ... Tayaramma Thatava Tayaramma Thatava Department of Molecular Medicine, Mayo Clinic Department of Molecular Medi...cine, Mayo Clinic ... Information Only Department of Molecular Medici...ne, Mayo Clinic Department of Molecular Medicine, Mayo Clinic ... 22142803 10.1186/scrt89 Succ

  18. Stemcell Information: SKIP000301 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available ... Information Only ... 23472874 10.1016/j.stem.2013.01.008 Genetic correction of a LRRK2 mutation in human iPSCs links parkinson... SKIP000301 ... Diseased L2-2GC L2-2GC ... パーキンソン病 G20 Parkinson's disease 607060 ...

  19. Stemcell Information: SKIP000302 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available ... Information Only ... 23472874 10.1016/j.stem.2013.01.008 Genetic correction of a LRRK2 mutation in human iPSCs links parkinso... SKIP000302 ... Diseased L2-3GC L2-3GC ... パーキンソン病 G20 Parkinson's disease 607060 ...

  20. Stemcell Information: SKIP000818 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available ... Noriyuki Tsumaki 妻木 範行 Center for iPS Cell Research and Application, Kyoto University 京都大学iPS細胞研究所 ... I...nformation Only Center for iPS Cell Research and Application, Kyoto University 京都大学iPS細胞研究所 https://www.cira

  1. A high-quality fuels database of photos and information

    Science.gov (United States)

    Clinton S. Wright; Paige C. Eagle; Diana L. Olson

    2010-01-01

    Photo series and their associated data provide a quick and easy way for managers to quantify and describe fuel and vegetation properties, such as loading of dead and down woody material, tree density, or height of understory vegetation. This information is critical for making fuel management decisions and for predicting fire behavior and fire effects. The Digital Photo...

  2. Stemcell Information: SKIP000870 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available Laboratory of Genetics Jun Yao--Fred H. Gage Jun Yao--Fred H. Gage Information Only ... 26524527 ... 10.1038...y, Mi S, Brennand KJ, Kelsoe JR, Gage FH, Yao J Nature 2015 527 7576 95-9 http://www.ncbi.nlm.nih.gov/pubmed/26524527 ...

  3. Stemcell Information: SKIP000874 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available ological Studies, Laboratory of Genetics Jun Yao--Fred H. Gage Jun Yao--Fred H. Gage Information Only ... ...olar Disorder Study, Mi S, Brennand KJ, Kelsoe JR, Gage FH, Yao J Nature 2015 527 7576 95-9 http://www.ncbi.nlm.nih.gov/pubmed/26524527 ...

  4. Stemcell Information: SKIP000873 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available ies, Laboratory of Genetics Jun Yao--Fred H. Gage Jun Yao--Fred H. Gage Information Only ... 26524527 ... 10... Study, Mi S, Brennand KJ, Kelsoe JR, Gage FH, Yao J Nature 2015 527 7576 95-9 http://www.ncbi.nlm.nih.gov/pubmed/26524527 ...

  5. Stemcell Information: SKIP000294 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available er Thomas Gasser Department of Neurodegenerative Diseases Hertie Institute for Cl...inical Brain Research, University of Tubingen, and German Center for Neurodegenerative Diseases Department of Neurodegenerative Disea...n Center for Neurodegenerative Diseases ... Information Only ... 23472874 10.1...ses Hertie Institute for Clinical Brain Research, University of Tubingen, and Germa

  6. Key Techniques for Dynamic Updating of National Fundamental Geographic Information Database

    Directory of Open Access Journals (Sweden)

    WANG Donghua

    2015-07-01

    Full Text Available One of the most important missions of fundamental surveying and mapping work is to keep the fundamental geographic information fresh. In this respect, National Administration of Surveying, Mapping and Geoinformation has launched the project of dynamic updating of national fundamental geographic information database since 2012, which aims to update 1:50 000, 1:250 000 and 1:1 000 000 national fundamental geographic information database continuously and quickly, by updating and publishing once a year. This paper introduces the general technical thinking of dynamic updating, states main technical methods, such as dynamic updating of fundamental database, linkage updating of derived databases, and multi-tense database management and service and so on, and finally introduces main technical characteristics and engineering applications.

  7. The IPE Database: providing information on plant design, core damage frequency and containment performance

    International Nuclear Information System (INIS)

    Lehner, J.R.; Lin, C.C.; Pratt, W.T.; Su, T.; Danziger, L.

    1996-01-01

    A database, called the IPE Database has been developed that stores data obtained from the Individual Plant Examinations (IPEs) which licensees of nuclear power plants have conducted in response to the Nuclear Regulatory Commission's (NRC) Generic Letter GL88-20. The IPE Database is a collection of linked files which store information about plant design, core damage frequency (CDF), and containment performance in a uniform, structured way. The information contained in the various files is based on data contained in the IPE submittals. The information extracted from the submittals and entered into the IPE Database can be manipulated so that queries regarding individual or groups of plants can be answered using the IPE Database

  8. A Reaction Database for Small Molecule Pharmaceutical Processes Integrated with Process Information

    Directory of Open Access Journals (Sweden)

    Emmanouil Papadakis

    2017-10-01

    Full Text Available This article describes the development of a reaction database with the objective to collect data for multiphase reactions involved in small molecule pharmaceutical processes with a search engine to retrieve necessary data in investigations of reaction-separation schemes, such as the role of organic solvents in reaction performance improvement. The focus of this reaction database is to provide a data rich environment with process information available to assist during the early stage synthesis of pharmaceutical products. The database is structured in terms of reaction classification of reaction types; compounds participating in the reaction; use of organic solvents and their function; information for single step and multistep reactions; target products; reaction conditions and reaction data. Information for reactor scale-up together with information for the separation and other relevant information for each reaction and reference are also available in the database. Additionally, the retrieved information obtained from the database can be evaluated in terms of sustainability using well-known “green” metrics published in the scientific literature. The application of the database is illustrated through the synthesis of ibuprofen, for which data on different reaction pathways have been retrieved from the database and compared using “green” chemistry metrics.

  9. Harmonised information exchange between decentralised food composition database systems

    DEFF Research Database (Denmark)

    Pakkala, Heikki; Christensen, Tue; Martínez de Victoria, Ignacio

    2010-01-01

    FIR specifications is under development. The data interchange happens through the EuroFIR Web Services interface, allowing the partners to implement their system using methods and software suitable for the local computer environment. The implementation uses common international standards, such as Simple Object...... to those network nodes linked to the EuroFIR Web Services that will most likely have the requested information. The retrieved FCD are compiled into a specifically designed data interchange format (the EuroFIR Food Data Transport Package) in XML, which is sent back to the EuroFIR eSearch facility......Background/Objectives: The main aim of the European Food Information Resource (EuroFIR) project is to develop and disseminate a comprehensive, coherent and validated data bank for the distribution of food composition data (FCD). This can only be accomplished by harmonising food description and data...

  10. Stemcell Information: SKIP000543 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available ... Atsushi Tanaka 田中 敦史 Department of Cardiology, Keio University School of Medicine 慶應義塾大学医学部循環器内科 Depart...ment of Cardiology, Keio University School of Medicine 慶應義塾大学医学部循環器内科 Shinsuke Yuasa 湯浅 慎介 Information Only

  11. Stemcell Information: SKIP000525 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available nzhao Cheng Linzhao Cheng Stem Cell Program, Institute for Cell Engineering, and Department of Gynecology & ...Obstetrics, Johns Hopkins University School of Medicine Stem Cell Program, Institute for Cell Engineering, a...cine Stem Cell Program, Institute for Cell Engineering, and Department of Gynecology & Obstetrics, Johns Hop...kins University School of Medicine Stem Cell Program, Institute for Cell Engineering, and Department of Gyne...nzhao Cheng Information Only Stem Cell Program, Institute for Cell Engineering, and Department of Gynecology

  12. Stemcell Information: SKIP000526 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available nzhao Cheng Linzhao Cheng Stem Cell Program, Institute for Cell Engineering, and Department of Gynecology & ...Obstetrics, Johns Hopkins University School of Medicine Stem Cell Program, Institute for Cell Engineering, a...cine Stem Cell Program, Institute for Cell Engineering, and Department of Gynecology & Obstetrics, Johns Hop...kins University School of Medicine Stem Cell Program, Institute for Cell Engineering, and Department of Gyne...nzhao Cheng Information Only Stem Cell Program, Institute for Cell Engineering, and Department of Gynecology

  13. Stemcell Information: SKIP000523 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available nzhao Cheng Linzhao Cheng Stem Cell Program, Institute for Cell Engineering, and Department of Gynecology & ...Obstetrics, Johns Hopkins University School of Medicine Stem Cell Program, Institute for Cell Engineering, a...cine Stem Cell Program, Institute for Cell Engineering, and Department of Gynecology & Obstetrics, Johns Hop...kins University School of Medicine Stem Cell Program, Institute for Cell Engineering, and Department of Gyne...nzhao Cheng Information Only Stem Cell Program, Institute for Cell Engineering, and Department of Gynecology

  14. Stemcell Information: SKIP000529 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available Linzhao Cheng Linzhao Cheng Stem Cell Program, Institute for Cell Engineering, and Department of Gynecology ...& Obstetrics, Johns Hopkins University School of Medicine Stem Cell Program, Institute for Cell Engineering,...dicine Stem Cell Program, Institute for Cell Engineering, and Department of Gynecology & Obstetrics, Johns H...opkins University School of Medicine Stem Cell Program, Institute for Cell Engineering, and Department of Gy...Linzhao Cheng Information Only Stem Cell Program, Institute for Cell Engineering, and Department of Gynecolo

  15. Stemcell Information: SKIP000925 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available Fatima Institute for Neurophysiology, Medical Center, University of Cologne Institute for Neurophysio...logy, Medical Center, University of Cologne ... Information Only Institute for Neurophysio...logy, Medical Center, University of Cologne Institute for Neurophysiology, Medical Center, University of ...Farr, Lars Cleemann, Martin Morad, Hendrik Milting, Juergen Hescheler and Tomo Saric Cell Physiol Biochem 2011 28 4 579-92 http://www.ncbi.nlm.nih.gov/pubmed/22178870 ...

  16. Stemcell Information: SKIP001131 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available o University School of Medicine 慶應義塾大学医学部生理学教室 Department of Physiology, Keio University School of Medicine 慶應義塾大学医学部生理学...教室 Hideyuki Okano 岡野栄之 Information Only Department of Physiology, Keio University School of Medicine 慶應義塾大学医学部生理学

  17. Stemcell Information: SKIP001129 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available o University School of Medicine 慶應義塾大学医学部生理学教室 Department of Physiology, Keio University School of Medicine 慶應義塾大学医学部生理学...教室 Hideyuki Okano 岡野栄之 Information Only Department of Physiology, Keio University School of Medicine 慶應義塾大学医学部生理学

  18. Stemcell Information: SKIP001130 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available o University School of Medicine 慶應義塾大学医学部生理学教室 Department of Physiology, Keio University School of Medicine 慶應義塾大学医学部生理学...教室 Hideyuki Okano 岡野栄之 Information Only Department of Physiology, Keio University School of Medicine 慶應義塾大学医学部生理学

  19. Stemcell Information: SKIP000666 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available bryoid body formation ... Yes qRT-PCR ... Immune Disease Institute, Program in Cellular and Molecular Medicine, Children...lular and Molecular Medicine, Children's Hospital Boston Derrick J. Rossi Derrick J. Rossi Information Only ...Immune Disease Institute, Program in Cellular and Molecular Medicine, Children's Hospital Boston Immune Dise...ase Institute, Program in Cellular and Molecular Medicine, Children's Hospital Boston ... 20888316--2136882

  20. Stemcell Information: SKIP000670 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available Teratoma assay Yes qRT-PCR ... Immune Disease Institute, Program in Cellular and Molecular Medicine, Children...sease Institute, Program in Cellular and Molecular Medicine, Children's Hospital Boston Immune Disease Insti...tute, Program in Cellular and Molecular Medicine, Children's Hospital Boston ... 20888316--21368825 10.1016...'s Hospital Boston Immune Disease Institute, Program in Cellular and Molecular Medicine, Chil...dren's Hospital Boston Derrick J. Rossi Derrick J. Rossi Information Only Immune Di

  1. Stemcell Information: SKIP000561 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available nnear Caroline Kinnear Department of Pediatrics|and dDevelopmental and|Stem Cell Biology, Hospital|for Sick Children..., University|of Toronto Department of Pediatricsand dDevelopmental andStem Cell Biology, Hospitalfor Sick Children...and|Stem Cell Biology, Hospital|for Sick Children, University|of Toronto Department of Pediatricsand dDevelo...pmental andStem Cell Biology, Hospitalfor Sick Children, Universityof Toronto Seema Mital Seema Mital Inform

  2. Stemcell Information: SKIP000671 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available s Teratoma assay Yes qRT-PCR ... Immune Disease Institute, Program in Cellular and Molecular Medicine, Children...Disease Institute, Program in Cellular and Molecular Medicine, Children's Hospital Boston Immune Disease Ins...titute, Program in Cellular and Molecular Medicine, Children's Hospital Boston ... 20888316--21368825 10.10...nd Molecular Medicine, Children's Hospital Boston Derrick J. Rossi Derrick J. Rossi Information Only Immune ...'s Hospital Boston Immune Disease Institute, Program in Cellular a

  3. Stemcell Information: SKIP000562 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available nnear Caroline Kinnear Department of Pediatrics|and dDevelopmental and|Stem Cell Biology, Hospital|for Sick Children..., University|of Toronto Department of Pediatricsand dDevelopmental andStem Cell Biology, Hospitalfor Sick Children...and|Stem Cell Biology, Hospital|for Sick Children, University|of Toronto Department of Pediatricsand dDevelo...pmental andStem Cell Biology, Hospitalfor Sick Children, Universityof Toronto Seema Mital Seema Mital Inform

  4. Stemcell Information: SKIP000911 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available University 京都大学iPS細胞研究所 Center for iPS Cell Research and Application (CiRA), Kyo...to University 京都大学CiRA増殖機構分化機構研究部門 Haruhisa Inoue 井上 治久 Information Only Center for iPS Cell Research and Ap

  5. Stemcell Information: SKIP000318 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available v Sareen--Allison D. Ebert Dhruv Sareen--Allison D. Ebert Regenerative Medicine Institute, Cedars-Sinai Medi...cal Center --Medical College of Wisconsin Regenerative Medicine Institute, Cedars...-Sinai Medical Center--Medical College of Wisconsin ... Information Only Regenerative Medicine Institute, Ce...dars-Sinai Medical Center ... Regenerative Medicine Institute, Cedars-Sinai Medical Center ... 22723941 10.13

  6. Stemcell Information: SKIP000575 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available i Masataka Hosoi Department of Hematology and Oncology, Graduate School of Medicine, University of Tokyo Dep...artment of Hematology and Oncology, Graduate School of Medicine, University of Tokyo Department of Hematolog...y and Oncology, Graduate School of Medicine, University of Tokyo Department of He...matology and Oncology, Graduate School of Medicine, University of Tokyo Mineo Kurowaka Mineo Kurowaka Inform

  7. An online database for informing ecological network models: http://kelpforest.ucsc.edu

    Science.gov (United States)

    Beas-Luna, Rodrigo; Tinker, M. Tim; Novak, Mark; Carr, Mark H.; Black, August; Caselle, Jennifer E.; Hoban, Michael; Malone, Dan; Iles, Alison C.

    2014-01-01

    Ecological network models and analyses are recognized as valuable tools for understanding the dynamics and resiliency of ecosystems, and for informing ecosystem-based approaches to management. However, few databases exist that can provide the life history, demographic and species interaction information necessary to parameterize ecological network models. Faced with the difficulty of synthesizing the information required to construct models for kelp forest ecosystems along the West Coast of North America, we developed an online database (http://kelpforest.ucsc.edu/) to facilitate the collation and dissemination of such information. Many of the database's attributes are novel yet the structure is applicable and adaptable to other ecosystem modeling efforts. Information for each taxonomic unit includes stage-specific life history, demography, and body-size allometries. Species interactions include trophic, competitive, facilitative, and parasitic forms. Each data entry is temporally and spatially explicit. The online data entry interface allows researchers anywhere to contribute and access information. Quality control is facilitated by attributing each entry to unique contributor identities and source citations. The database has proven useful as an archive of species and ecosystem-specific information in the development of several ecological network models, for informing management actions, and for education purposes (e.g., undergraduate and graduate training). To facilitate adaptation of the database by other researches for other ecosystems, the code and technical details on how to customize this database and apply it to other ecosystems are freely available and located at the following link (https://github.com/kelpforest-cameo/data​baseui).

  8. An Online Database for Informing Ecological Network Models: http://kelpforest.ucsc.edu

    Science.gov (United States)

    Beas-Luna, Rodrigo; Novak, Mark; Carr, Mark H.; Tinker, Martin T.; Black, August; Caselle, Jennifer E.; Hoban, Michael; Malone, Dan; Iles, Alison

    2014-01-01

    Ecological network models and analyses are recognized as valuable tools for understanding the dynamics and resiliency of ecosystems, and for informing ecosystem-based approaches to management. However, few databases exist that can provide the life history, demographic and species interaction information necessary to parameterize ecological network models. Faced with the difficulty of synthesizing the information required to construct models for kelp forest ecosystems along the West Coast of North America, we developed an online database (http://kelpforest.ucsc.edu/) to facilitate the collation and dissemination of such information. Many of the database's attributes are novel yet the structure is applicable and adaptable to other ecosystem modeling efforts. Information for each taxonomic unit includes stage-specific life history, demography, and body-size allometries. Species interactions include trophic, competitive, facilitative, and parasitic forms. Each data entry is temporally and spatially explicit. The online data entry interface allows researchers anywhere to contribute and access information. Quality control is facilitated by attributing each entry to unique contributor identities and source citations. The database has proven useful as an archive of species and ecosystem-specific information in the development of several ecological network models, for informing management actions, and for education purposes (e.g., undergraduate and graduate training). To facilitate adaptation of the database by other researches for other ecosystems, the code and technical details on how to customize this database and apply it to other ecosystems are freely available and located at the following link (https://github.com/kelpforest-cameo/databaseui). PMID:25343723

  9. An online database for informing ecological network models: http://kelpforest.ucsc.edu.

    Science.gov (United States)

    Beas-Luna, Rodrigo; Novak, Mark; Carr, Mark H; Tinker, Martin T; Black, August; Caselle, Jennifer E; Hoban, Michael; Malone, Dan; Iles, Alison

    2014-01-01

    Ecological network models and analyses are recognized as valuable tools for understanding the dynamics and resiliency of ecosystems, and for informing ecosystem-based approaches to management. However, few databases exist that can provide the life history, demographic and species interaction information necessary to parameterize ecological network models. Faced with the difficulty of synthesizing the information required to construct models for kelp forest ecosystems along the West Coast of North America, we developed an online database (http://kelpforest.ucsc.edu/) to facilitate the collation and dissemination of such information. Many of the database's attributes are novel yet the structure is applicable and adaptable to other ecosystem modeling efforts. Information for each taxonomic unit includes stage-specific life history, demography, and body-size allometries. Species interactions include trophic, competitive, facilitative, and parasitic forms. Each data entry is temporally and spatially explicit. The online data entry interface allows researchers anywhere to contribute and access information. Quality control is facilitated by attributing each entry to unique contributor identities and source citations. The database has proven useful as an archive of species and ecosystem-specific information in the development of several ecological network models, for informing management actions, and for education purposes (e.g., undergraduate and graduate training). To facilitate adaptation of the database by other researches for other ecosystems, the code and technical details on how to customize this database and apply it to other ecosystems are freely available and located at the following link (https://github.com/kelpforest-cameo/databaseui).

  10. An Examination of Job Skills Posted on Internet Databases: Implications for Information Systems Degree Programs.

    Science.gov (United States)

    Liu, Xia; Liu, Lai C.; Koong, Kai S.; Lu, June

    2003-01-01

    Analysis of 300 information technology job postings in two Internet databases identified the following skill categories: programming languages (Java, C/C++, and Visual Basic were most frequent); website development (57% sought SQL and HTML skills); databases (nearly 50% required Oracle); networks (only Windows NT or wide-area/local-area networks);…

  11. Stemcell Information: SKIP000984 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available istochemistry ... Yes Differentiation Yes RT-PCR No ... Yes ... Yes RT-PCR ... Tony Hunter Tony Hunter Molecular and Cell Biology... Laboratory, Salk Institute for Biological Studies, La Jolla, United States Molecular and Cell Biology...tes Molecular and Cell Biology Laboratory, Salk Institute for Biological Studies, La Jolla, United States Molecular and Cell Biology...ter Tony Hunter Information Only Molecular and Cell Biology Laboratory, Salk Inst...itute for Biological Studies, La Jolla, United States Molecular and Cell Biology Laboratory, Salk Institute

  12. Stemcell Information: SKIP000530 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available ... Linzhao Cheng Linzhao Cheng Stem Cell Program, Institute for Cell Engineering, and Department of Gynecol...ogy & Obstetrics, Johns Hopkins University School of Medicine Stem Cell Program, Institute for Cell Engineer...f Medicine Stem Cell Program, Institute for Cell Engineering, and Department of Gynecology & Obstetrics, Joh...ns Hopkins University School of Medicine Stem Cell Program, Institute for Cell Engineering, and Department o...eng Linzhao Cheng Information Only Stem Cell Program, Institute for Cell Engineering, and Department of Gyne

  13. Stemcell Information: SKIP000531 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available ... Linzhao Cheng Linzhao Cheng Stem Cell Program, Institute for Cell Engineering, and Department of Gynecol...ogy & Obstetrics, Johns Hopkins University School of Medicine Stem Cell Program, Institute for Cell Engineer...f Medicine Stem Cell Program, Institute for Cell Engineering, and Department of Gynecology & Obstetrics, Joh...ns Hopkins University School of Medicine Stem Cell Program, Institute for Cell Engineering, and Department o...eng Linzhao Cheng Information Only Stem Cell Program, Institute for Cell Engineering, and Department of Gyne

  14. Stemcell Information: SKIP000522 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available ... Yes ... Linzhao Cheng Linzhao Cheng Stem Cell Program, Institute for Cell Engineering, and Departme...nt of Gynecology & Obstetrics, Johns Hopkins University School of Medicine Stem Cell Program, Institute for Cell Engineer...sity School of Medicine Stem Cell Program, Institute for Cell Engineering, and Department of Gynecology & Ob...stetrics, Johns Hopkins University School of Medicine Stem Cell Program, Institute for Cell Engineering, and...ne Linzhao Cheng Linzhao Cheng Information Only Stem Cell Program, Institute for Cell Engineering, and Depar

  15. Stemcell Information: SKIP000923 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available iation to cardiomyocytes Yes teratoma formation ... Yes ... Yes qRT-PCR Azra Fatima Azra Fatima Institute for Neurophysio...logy, Medical Center, University of Cologne Institute for Neurophysio...logy, Medical Center, University of Cologne ... Information Only Institute for Neurophysiology, Medical ...Center, University of Cologne Institute for Neurophysiology, Medical Center, University of Cologne ... 2217...nn, Martin Morad, Hendrik Milting, Juergen Hescheler and Tomo Saric Cell Physiol Biochem 2011 28 4 579-92 http://www.ncbi.nlm.nih.gov/pubmed/22178870 ...

  16. Stemcell Information: SKIP000924 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available iation to cardiomyocytes Yes teratoma formation ... Yes ... Yes RT-PCR ... Yes qRT-PCR Azra Fatima Azra Fatima Institute for Neurophysio...logy, Medical Center, University of Cologne Institute for Neurophysio...logy, Medical Center, University of Cologne ... Information Only Institute for Neurophysiology,... Medical Center, University of Cologne Institute for Neurophysiology, Medical Center, University of Cologne ...rs Cleemann, Martin Morad, Hendrik Milting, Juergen Hescheler and Tomo Saric Cell Physiol Biochem 2011 28 4 579-92 http://www.ncbi.nlm.nih.gov/pubmed/22178870 ...

  17. Stemcell Information: SKIP000922 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available ntiation to cardiomyocytes Yes teratoma formation ... Yes ... Yes RT-PCR ... Yes qRT-PCR Tomo Saric Tomo Saric Institute for Neurophysio...logy, Medical Center, University of Cologne Institute for Neurophysio...logy, Medical Center, University of Cologne ... Information Only Institute for Neurophysiology,... Medical Center, University of Cologne Institute for Neurophysiology, Medical Center, University of Cologne ...rs Cleemann, Martin Morad, Hendrik Milting, Juergen Hescheler and Tomo Saric Cell Physiol Biochem 2011 28 4 579-92 http://www.ncbi.nlm.nih.gov/pubmed/22178870 ...

  18. Stemcell Information: SKIP000537 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available ).(Control line with a wildtype ACVR1 gene.) ヒト線維芽細胞(Cell Application,Inc. 106-05a Lot No.1388)由来iPS細胞。(コントロ...ール(ACVR1(WT))として使用)| human ES-like Research Grade Retrovirus OCT4, SOX2, KLF4, c-MYC ... Yes SNL feeder cell...s primate ES cell medium(ReproCELL) ... Yes Immunohistochemistry Yes EB formation as...生医科学研究所 ... Information Only ... 24321451 10.1186/1750-1172-8-190 Induced pluripotent stem cell

  19. Stemcell Information: SKIP000813 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available GM10749)-specific iPSC タナトフォリック骨異形成症(GM10749)患者線維芽細胞由来iPS細胞 human ES-like Research Grade Other Mixture Y4: O... for iPS Cell Research and Application, Kyoto University 京都大学iPS細胞研究所 ... Information Only Center for iPS Ce...ll Research and Application, Kyoto University 京都大学iPS細胞研究所 https://www.cira.kyoto

  20. Stemcell Information: SKIP000541 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available ved from human foreskin fibroblasts ((ATCC CRL-2522)(Control line with a wildtype ACVR1 gene.) 新生児包皮線維芽細胞(ATCC CRL-2522)由来iPS細胞...。(コントロール(ACVR1(WT))として使用)| -- Research Grade Plasmid Y4 ... Yes SNL feeder cells primate ES cell...究所 ... Information Only ... 24321451 10.1186/1750-1172-8-190 Induced pluripotent stem cells from patients

  1. Stemcell Information: SKIP000819 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available n/Caucasian -- No Control iPSC derived from HDFs (KURABO (01439)). KURABO(01439)由来iPS細胞。 human ES-like Resea...Noriyuki Tsumaki 妻木 範行 Center for iPS Cell Research and Application, Kyoto University 京都大学iPS細胞研究所 ... Infor...mation Only Center for iPS Cell Research and Application, Kyoto University 京都大学iPS細胞研究所 https://www.cira.kyo

  2. Stemcell Information: SKIP001096 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available line derived from a neonate.(1439 KURABO)| 新生児皮膚繊維芽細胞(1439 KURABO)由来iPS細胞 human ES-like Research ...n, Kyoto University 京都大学iPS細胞研究所 ... Information Only Center for iPS Cell Research and Application,Kyoto University 京都大学iPS細胞... SKIP001096 ... Normal WT-1-#2 WT-1-#2 ... 0-9 Male ... -- No Nomal human iPS cell...ing type II collagenopathy skeletal dysplasia by directed conversion and induced pluripotent stem cell

  3. Stemcell Information: SKIP000815 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available ather of GM08859. 軟骨無形成症患者(GM08857)線維芽細胞由来iPS細胞。|GM08857はGM08859の父親。 human ES-like Research Grade Other Mixt...範行 Center for iPS Cell Research and Application, Kyoto University 京都大学iPS細胞研究所 ... Information Only Center f...or iPS Cell Research and Application, Kyoto University 京都大学iPS細胞研究所 https://www.c

  4. Stemcell Information: SKIP000518 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available ... Yohei Okada 岡田 洋平 Department of Physiology, Keio University School of Medicine 慶應義塾大学 医学部 生理学...教室 Department of Physiology, Keio University School of Medicine 慶應義塾大学 医学部 生理学教室 Hideyuki O...kano 岡野 栄之 Information Only Department of Physiology, Keio University School of Medicine 慶應義塾大学 医学部 生理学教室 ...

  5. Stemcell Information: SKIP000833 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available ... No ... Yes Microarray Hideyuki Okano 岡野栄之 Keio University, School of Medicine, Department of Physiology ... 慶應義塾大学 医学部 生理学...教室 Keio University, School of Medicine, Department of Physiology ... 慶應義塾大学 医学部 生理学...教室 Hideyuki Okano 岡野栄之 Information Only Keio University, School of Medicine, Department of Physiology ... 慶應義塾大学 医学部 生理学

  6. Stemcell Information: SKIP000837 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available ideyuki Okano 岡野栄之 Keio University, School of Medicine, Department of Physiology ... 慶應義塾大学 医学部 生理学...教室 Keio University, School of Medicine, Department of Physiology ... 慶應義塾大学 医学部 生理学教室 Hideyuki O...kano 岡野栄之 Information Only Keio University, School of Medicine, Department of Physiology ... 慶應義塾大学 医学部 生理学教室 ...

  7. Stemcell Information: SKIP000520 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available ... Yohei Okada 岡田 洋平 Department of Physiology, Keio University School of Medicine 慶應義塾大学 医学部 生理学...教室 Department of Physiology, Keio University School of Medicine 慶應義塾大学 医学部 生理学教室 Hideyuki O...kano 岡野 栄之 Information Only Department of Physiology, Keio University School of Medicine 慶應義塾大学 医学部 生理学教室 ...

  8. Stemcell Information: SKIP000841 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available 之 Department of Physiology, Keio University School of Medicine 慶應義塾大学 医学部 生理学教室 Department of Physiology, Ke...io University School of Medicine 慶應義塾大学 医学部 生理学教室 Hideyuki Okano 岡野 栄之 Information Only Department of Physio...logy, Keio University School of Medicine 慶應義塾大学 医学部 生理学教室 ... 26905201 10.1016/j.stemcr.2016.01.010 Functio

  9. Stemcell Information: SKIP000835 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available yuki Okano 岡野栄之 Keio University, School of Medicine, Department of Physiology ... 慶應義塾大学 医学部 生理学...教室 Keio University, School of Medicine, Department of Physiology ... 慶應義塾大学 医学部 生理学教室 Hideyuki Okan...o 岡野栄之 Information Only Keio University, School of Medicine, Department of Physiology ... 慶應義塾大学 医学部 生理学教室 ...

  10. Stemcell Information: SKIP000831 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available niversity, School of Medicine, Department of Physiology ... 慶應義塾大学 医学部 生理学教室 Keio Un...iversity, School of Medicine, Department of Physiology ... 慶應義塾大学 医学部 生理学教室 Hideyuki Okano 岡野栄之 Information Onl...y Keio University, School of Medicine, Department of Physiology ... 慶應義塾大学 医学部 生理学教室 ... 26905201 10.1016/j.st

  11. Stemcell Information: SKIP000829 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available ... Yes Microarray Hideyuki Okano 岡野栄之 Keio University, School of Medicine, Department of Physiology ... 慶應義塾大学 医学部 生理学...教室 Keio University, School of Medicine, Department of Physiology ... 慶應義塾大学 医学部 生理学教室 Hideyuki Okano 岡野...栄之 Information Only Keio University, School of Medicine, Department of Physiology ... 慶應義塾大学 医学部 生理学

  12. Stemcell Information: SKIP000830 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available Hideyuki Okano 岡野栄之 Keio University, School of Medicine, Department of Physiology ... 慶應義塾大学 医学部 生理学教室 Keio Un...iversity, School of Medicine, Department of Physiology ... 慶應義塾大学 医学部 生理学教室 Hideyuki Okano 岡野栄之 Information Onl...y Keio University, School of Medicine, Department of Physiology ... 慶應義塾大学 医学部 生理学教室

  13. Stemcell Information: SKIP000515 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available ... Yohei Okada 岡田 洋平 Department of Physiology, Keio University School of Medicine 慶應義塾大学 医学部 生理学...教室 Department of Physiology, Keio University School of Medicine 慶應義塾大学 医学部 生理学教室 Hideyuki Okan...o 岡野 栄之 Information Only Department of Physiology, Keio University School of Medicine 慶應義塾大学 医学部 生理学教室 ...

  14. Stemcell Information: SKIP000836 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available yuki Okano 岡野栄之 Keio University, School of Medicine, Department of Physiology ... 慶應義塾大学 医学部 生理学...教室 Keio University, School of Medicine, Department of Physiology ... 慶應義塾大学 医学部 生理学教室 Hideyuki Okan...o 岡野栄之 Information Only Keio University, School of Medicine, Department of Physiology ... 慶應義塾大学 医学部 生理学教室 ...

  15. Stemcell Information: SKIP000825 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available ray Hideyuki Okano 岡野栄之 Keio University, School of Medicine, Department of Physiology ... 慶應義塾大学 医学部 生理学教室 Keio... University, School of Medicine, Department of Physiology ... 慶應義塾大学 医学部 生理学教室 Hideyuki Okano 岡野栄之 Information ...Only Keio University, School of Medicine, Department of Physiology ... 慶應義塾大学 医学部 生理学

  16. Stemcell Information: SKIP000838 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available ideyuki Okano 岡野栄之 Keio University, School of Medicine, Department of Physiology ... 慶應義塾大学 医学部 生理学...教室 Keio University, School of Medicine, Department of Physiology ... 慶應義塾大学 医学部 生理学教室 Hideyuki O...kano 岡野栄之 Information Only Keio University, School of Medicine, Department of Physiology ... 慶應義塾大学 医学部 生理学教室 ...

  17. Stemcell Information: SKIP000834 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available ... No ... Yes Microarray Hideyuki Okano 岡野栄之 Keio University, School of Medicine, Department of Physiology ... 慶應義塾大学 医学部 生理学...教室 Keio University, School of Medicine, Department of Physiology ... 慶應義塾大学 医学部 生理学...教室 Hideyuki Okano 岡野栄之 Information Only Keio University, School of Medicine, Department of Physiology ... 慶應義塾大学 医学部 生理学

  18. Stemcell Information: SKIP000826 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available ray Hideyuki Okano 岡野栄之 Keio University, School of Medicine, Department of Physiology ... 慶應義塾大学 医学部 生理学教室 Keio... University, School of Medicine, Department of Physiology ... 慶應義塾大学 医学部 生理学教室 Hideyuki Okano 岡野栄之 Information ...Only Keio University, School of Medicine, Department of Physiology ... 慶應義塾大学 医学部 生理学

  19. Stemcell Information: SKIP001128 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available no 岡野栄之 Department of Physiology, Keio University School of Medicine 慶應義塾大学医学部生理学教室 Department of Physiology..., Keio University School of Medicine 慶應義塾大学医学部生理学教室 Hideyuki Okano 岡野栄之 Informati...on Only Department of Physiology, Keio University School of Medicine 慶應義塾大学医学部生理学教室 ... 26997647 10.1016/j.

  20. Stemcell Information: SKIP000517 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available ... Yohei Okada 岡田 洋平 Department of Physiology, Keio University School of Medicine 慶應義塾大学 医学部 生理学...教室 Department of Physiology, Keio University School of Medicine 慶應義塾大学 医学部 生理学教室 Hideyuki Okan...o 岡野 栄之 Information Only Department of Physiology, Keio University School of Medicine 慶應義塾大学 医学部 生理学教室 ...

  1. Stemcell Information: SKIP000519 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available ... Yohei Okada 岡田 洋平 Department of Physiology, Keio University School of Medicine 慶應義塾大学 医学部 生理学...教室 Department of Physiology, Keio University School of Medicine 慶應義塾大学 医学部 生理学教室 Hideyuki O...kano 岡野 栄之 Information Only Department of Physiology, Keio University School of Medicine 慶應義塾大学 医学部 生理学教室 ...

  2. Stemcell Information: SKIP000516 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available ... Yohei Okada 岡田 洋平 Department of Physiology, Keio University School of Medicine 慶應義塾大学 医学部 生理学...教室 Department of Physiology, Keio University School of Medicine 慶應義塾大学 医学部 生理学教室 Hideyuki Oka...no 岡野 栄之 Information Only Department of Physiology, Keio University School of Medicine 慶應義塾大学 医学部 生理学教室 ...

  3. Stemcell Information: SKIP000832 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available University, School of Medicine, Department of Physiology ... 慶應義塾大学 医学部 生理学教室 Keio U...niversity, School of Medicine, Department of Physiology ... 慶應義塾大学 医学部 生理学教室 Hideyuki Okano 岡野栄之 Information On...ly Keio University, School of Medicine, Department of Physiology ... 慶應義塾大学 医学部 生理学教室 ... 26905201 10.1016/j.s

  4. Stemcell Information: SKIP000842 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available  栄之 Department of Physiology, Keio University School of Medicine 慶應義塾大学 医学部 生理学教室 Department of Physiology, ...Keio University School of Medicine 慶應義塾大学 医学部 生理学教室 Hideyuki Okano 岡野 栄之 Information Only Department of Phys...iology, Keio University School of Medicine 慶應義塾大学 医学部 生理学教室 ... 26905201 10.1016/j.stemcr.2016.01.010 Funct

  5. Stemcell Information: SKIP000879 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available kkaido University, Hokkaido 北海道大学 遺伝子病制御研究所 動物機能医科学研究室 ... Information Only Biomedical Animal Research Labor...y ... No ... Kyoko Miura 三浦恭子 Biomedical Animal Research Laboratory, Institute for Genetic Medicine, Ho...atory, Institute for Genetic Medicine, Hokkaido University, Hokkaido 北海道大学 遺伝子病制御研究所 動物機能医科

  6. Stemcell Information: SKIP000887 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available netic Medicine, Hokkaido University, Hokkaido 北海道大学 遺伝子病制御研究所 動物機能医科学研究室 ... Information Only Biomedical Ani...say ... Yes G-band analyses ... Kyoko Miura 三浦恭子 Biomedical Animal Research Laboratory, Institute for Ge...kaido 北海道大学 遺伝子病制御研究所 動物機能医科学研究室 http://www.igm.hokudai.ac.jp/debanezumi/ ... 27161380 10.1038/ncomms11471 ...

  7. Stemcell Information: SKIP000884 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available Hokkaido University, Hokkaido 北海道大学 遺伝子病制御研究所 動物機能医科学研究室 ... Information Only Biomedical Animal Research Lab...say ... No ... Kyoko Miura 三浦恭子 Biomedical Animal Research Laboratory, Institute for Genetic Medicine, ...oratory, Institute for Genetic Medicine, Hokkaido University, Hokkaido 北海道大学 遺伝子病制御研究所 動物機能医科

  8. Stemcell Information: SKIP000886 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available Hokkaido University, Hokkaido 北海道大学 遺伝子病制御研究所 動物機能医科学研究室 ... Information Only Biomedical Animal Research Lab...say ... No ... Kyoko Miura 三浦恭子 Biomedical Animal Research Laboratory, Institute for Genetic Medicine, ...oratory, Institute for Genetic Medicine, Hokkaido University, Hokkaido 北海道大学 遺伝子病制御研究所 動物機能医科

  9. Stemcell Information: SKIP000880 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available Hokkaido University, Hokkaido 北海道大学 遺伝子病制御研究所 動物機能医科学研究室 ... Information Only Biomedical Animal Research Lab...say ... No ... Kyoko Miura 三浦恭子 Biomedical Animal Research Laboratory, Institute for Genetic Medicine, ...oratory, Institute for Genetic Medicine, Hokkaido University, Hokkaido 北海道大学 遺伝子病制御研究所 動物機能医科

  10. Stemcell Information: SKIP000881 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available Hokkaido University, Hokkaido 北海道大学 遺伝子病制御研究所 動物機能医科学研究室 ... Information Only Biomedical Animal Research Lab...say ... No ... Kyoko Miura 三浦恭子 Biomedical Animal Research Laboratory, Institute for Genetic Medicine, ...oratory, Institute for Genetic Medicine, Hokkaido University, Hokkaido 北海道大学 遺伝子病制御研究所 動物機能医科

  11. Stemcell Information: SKIP000885 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available chemistry Yes Teratomas forming assay ... Yes G-band analyses ... Kyoko Miura 三浦恭子 Biomedical Animal Res...学研究室 ... Information Only Biomedical Animal Research Laboratory, Institute for Genetic ...earch Laboratory, Institute for Genetic Medicine, Hokkaido University, Hokkaido 北海道大学 遺伝子病制御研究所 動物機能医科...Medicine, Hokkaido University, Hokkaido 北海道大学 遺伝子病制御研究所 動物機能医科学研究室 http://www.igm.hokudai.ac.jp/debanezumi/

  12. Stemcell Information: SKIP000878 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available kkaido University, Hokkaido 北海道大学 遺伝子病制御研究所 動物機能医科学研究室 ... Information Only Biomedical Animal Research Labor...y ... No ... Kyoko Miura 三浦恭子 Biomedical Animal Research Laboratory, Institute for Genetic Medicine, Ho...atory, Institute for Genetic Medicine, Hokkaido University, Hokkaido 北海道大学 遺伝子病制御研究所 動物機能医科

  13. Stemcell Information: SKIP000882 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available Hokkaido University, Hokkaido 北海道大学 遺伝子病制御研究所 動物機能医科学研究室 ... Information Only Biomedical Animal Research Lab...say ... No ... Kyoko Miura 三浦恭子 Biomedical Animal Research Laboratory, Institute for Genetic Medicine, ...oratory, Institute for Genetic Medicine, Hokkaido University, Hokkaido 北海道大学 遺伝子病制御研究所 動物機能医科

  14. Stemcell Information: SKIP000883 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available Hokkaido University, Hokkaido 北海道大学 遺伝子病制御研究所 動物機能医科学研究室 ... Information Only Biomedical Animal Research Lab...say ... No ... Kyoko Miura 三浦恭子 Biomedical Animal Research Laboratory, Institute for Genetic Medicine, ...oratory, Institute for Genetic Medicine, Hokkaido University, Hokkaido 北海道大学 遺伝子病制御研究所 動物機能医科

  15. Stemcell Information: SKIP000823 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available suke Okita 沖田 圭介 Center for iPS Cell Research and Application, Kyoto University 京都大学iPS細胞研究所 Center for iPS ...Cell Research and Application, Kyoto University 京都大学iPS細胞研究所 Shinya Yamanaka 山中伸弥... Information Only Center for iPS Cell Research and Application, Kyoto University 京都大学iPS細胞研究所 http://www.cir

  16. Stemcell Information: SKIP000532 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available ted with 4 ng/ml bFGF ... Yes ... Yes ... C.L. Mummery C.L. Mummery Department of Anatomy and Embr...s, Utrecht, the Netherlands Department of Anatomy and Embryology, Leiden Universi...ty Medical Center, Leiden, and Interuniversity Cardiology Institute of the Netherlands, Utrecht, the Netherlands Department of Anatom...diology Institute of the Netherlands, Utrecht, the Netherlands Department of Anatomy and Embryology, Leiden ...e Netherlands, Utrecht, the Netherlands C.L. Mummery C.L. Mummery Information Only Department of Anatomy and

  17. Stemcell Information: SKIP000639 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available Alkaline phosphatase staining and immunocytochemistry ... No ... Yes ... Tsuyoshi Fujioka 藤岡 剛 RIKEN BioResource Center 理化学...研究所バイオリソースセンター RIKEN BioResource Center 理化学研究所バイオリソースセンター Yukio Nakamura 中村 幸夫 Informati...on Only RIKEN BioResource Center 理化学研究所バイオリソースセンター ... 20973836 10.1111/j.1749-0

  18. Stemcell Information: SKIP000651 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available ujioka 藤岡 剛 RIKEN BioResource Center 理化学研究所バイオリソースセンター RIKEN BioResource Center 理化学研究所バイオリソースセンター Yukio Naka...mura 中村 幸夫 Information Only RIKEN BioResource Center 理化学研究所バイオリソースセンター ... 20973

  19. Stemcell Information: SKIP000657 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available lkaline phosphatase staining and immunocytochemistry ... No ... Yes ... Tsuyoshi Fujioka 藤岡 剛 RIKEN BioResource Center 理化学...研究所バイオリソースセンター RIKEN BioResource Center 理化学研究所バイオリソースセンター Yukio Nakamura 中村 幸夫 Information... Only RIKEN BioResource Center 理化学研究所バイオリソースセンター ... 20973836 10.1111/j.1749-077

  20. Stemcell Information: SKIP000659 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available lkaline phosphatase staining and immunocytochemistry ... No ... Yes ... Tsuyoshi Fujioka 藤岡 剛 RIKEN BioResource Center 理化学...研究所バイオリソースセンター RIKEN BioResource Center 理化学研究所バイオリソースセンター Yukio Nakamura 中村 幸夫 Information... Only RIKEN BioResource Center 理化学研究所バイオリソースセンター ... 20973836 10.1111/j.1749-077

  1. Stemcell Information: SKIP000644 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available kaline phosphatase staining and immunocytochemistry ... Yes ... Tsuyoshi Fujioka 藤岡 剛 RIKEN BioResource Center 理化学...研究所バイオリソースセンター RIKEN BioResource Center 理化学研究所バイオリソースセンター Yukio Nakamura 中村 幸夫 Information On...ly RIKEN BioResource Center 理化学研究所バイオリソースセンター ... 20973836 10.1111/j.1749-0774.2

  2. Stemcell Information: SKIP000654 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available ujioka 藤岡 剛 RIKEN BioResource Center 理化学研究所バイオリソースセンター RIKEN BioResource Center 理化学研究所バイオリソースセンター Yukio Naka...mura 中村 幸夫 Information Only RIKEN BioResource Center 理化学研究所バイオリソースセンター ... 20973

  3. Stemcell Information: SKIP000649 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available Fujioka 藤岡 剛 RIKEN BioResource Center 理化学研究所バイオリソースセンター RIKEN BioResource Center 理化学研究所バイオリソースセンター Yukio Na...kamura 中村 幸夫 Information Only RIKEN BioResource Center 理化学研究所バイオリソースセンター ... 209

  4. Stemcell Information: SKIP000642 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available kaline phosphatase staining and immunocytochemistry ... Yes ... Tsuyoshi Fujioka 藤岡 剛 RIKEN BioResource Center 理化学...研究所バイオリソースセンター RIKEN BioResource Center 理化学研究所バイオリソースセンター Yukio Nakamura 中村 幸夫 Information On...ly RIKEN BioResource Center 理化学研究所バイオリソースセンター ... 20973836 10.1111/j.1749-0774.2

  5. Stemcell Information: SKIP000658 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available lkaline phosphatase staining and immunocytochemistry ... No ... Yes ... Tsuyoshi Fujioka 藤岡 剛 RIKEN BioResource Center 理化学...研究所バイオリソースセンター RIKEN BioResource Center 理化学研究所バイオリソースセンター Yukio Nakamura 中村 幸夫 Information... Only RIKEN BioResource Center 理化学研究所バイオリソースセンター ... 20973836 10.1111/j.1749-077

  6. Stemcell Information: SKIP000641 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available Alkaline phosphatase staining and immunocytochemistry ... No ... Yes ... Tsuyoshi Fujioka 藤岡 剛 RIKEN BioResource Center 理化学...研究所バイオリソースセンター RIKEN BioResource Center 理化学研究所バイオリソースセンター Yukio Nakamura 中村 幸夫 Informati...on Only RIKEN BioResource Center 理化学研究所バイオリソースセンター ... 20973836 10.1111/j.1749-0

  7. Stemcell Information: SKIP000655 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available lkaline phosphatase staining and immunocytochemistry ... No ... Yes ... Tsuyoshi Fujioka 藤岡 剛 RIKEN BioResource Center 理化学...研究所バイオリソースセンター RIKEN BioResource Center 理化学研究所バイオリソースセンター Yukio Nakamura 中村 幸夫 Information... Only RIKEN BioResource Center 理化学研究所バイオリソースセンター ... 20973836 10.1111/j.1749-077

  8. Stemcell Information: SKIP000652 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available lkaline phosphatase staining and immunocytochemistry ... Yes ... Tsuyoshi Fujioka 藤岡 剛 RIKEN BioResource Center 理化学...研究所バイオリソースセンター RIKEN BioResource Center 理化学研究所バイオリソースセンター Yukio Nakamura 中村 幸夫 Information O...nly RIKEN BioResource Center 理化学研究所バイオリソースセンター ... 20973836 10.1111/j.1749-0774.

  9. Stemcell Information: SKIP000656 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available lkaline phosphatase staining and immunocytochemistry ... No ... Yes ... Tsuyoshi Fujioka 藤岡 剛 RIKEN BioResource Center 理化学...研究所バイオリソースセンター RIKEN BioResource Center 理化学研究所バイオリソースセンター Yukio Nakamura 中村 幸夫 Information... Only RIKEN BioResource Center 理化学研究所バイオリソースセンター ... 20973836 10.1111/j.1749-077

  10. Stemcell Information: SKIP000638 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available Alkaline phosphatase staining and immunocytochemistry ... No ... Yes ... Tsuyoshi Fujioka 藤岡 剛 RIKEN BioResource Center 理化学...研究所バイオリソースセンター RIKEN BioResource Center 理化学研究所バイオリソースセンター Yukio Nakamura 中村 幸夫 Informati...on Only RIKEN BioResource Center 理化学研究所バイオリソースセンター ... 20973836 10.1111/j.1749-0

  11. Stemcell Information: SKIP000645 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available kaline phosphatase staining and immunocytochemistry ... Yes ... Tsuyoshi Fujioka 藤岡 剛 RIKEN BioResource Center 理化学...研究所バイオリソースセンター RIKEN BioResource Center 理化学研究所バイオリソースセンター Yukio Nakamura 中村 幸夫 Information On...ly RIKEN BioResource Center 理化学研究所バイオリソースセンター ... 20973836 10.1111/j.1749-0774.2

  12. Stemcell Information: SKIP000643 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available kaline phosphatase staining and immunocytochemistry ... Yes ... Tsuyoshi Fujioka 藤岡 剛 RIKEN BioResource Center 理化学...研究所バイオリソースセンター RIKEN BioResource Center 理化学研究所バイオリソースセンター Yukio Nakamura 中村 幸夫 Information On...ly RIKEN BioResource Center 理化学研究所バイオリソースセンター ... 20973836 10.1111/j.1749-0774.2

  13. Stemcell Information: SKIP000661 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available lkaline phosphatase staining and immunocytochemistry ... No ... Yes ... Tsuyoshi Fujioka 藤岡 剛 RIKEN BioResource Center 理化学...研究所バイオリソースセンター RIKEN BioResource Center 理化学研究所バイオリソースセンター Yukio Nakamura 中村 幸夫 Information... Only RIKEN BioResource Center 理化学研究所バイオリソースセンター ... 20973836 10.1111/j.1749-077

  14. Stemcell Information: SKIP000650 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available lkaline phosphatase staining and immunocytochemistry ... No ... Yes ... Tsuyoshi Fujioka 藤岡 剛 RIKEN BioResource Center 理化学...研究所バイオリソースセンター RIKEN BioResource Center 理化学研究所バイオリソースセンター Yukio Nakamura 中村 幸夫 Information... Only RIKEN BioResource Center 理化学研究所バイオリソースセンター ... 20973836 10.1111/j.1749-077

  15. Stemcell Information: SKIP000660 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available lkaline phosphatase staining and immunocytochemistry ... No ... Yes ... Tsuyoshi Fujioka 藤岡 剛 RIKEN BioResource Center 理化学...研究所バイオリソースセンター RIKEN BioResource Center 理化学研究所バイオリソースセンター Yukio Nakamura 中村 幸夫 Information... Only RIKEN BioResource Center 理化学研究所バイオリソースセンター ... 20973836 10.1111/j.1749-077

  16. Stemcell Information: SKIP000647 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available staining and immunocytochemistry ... Yes Teratoma formation ... Yes ... Yes ... Tsuyoshi Fujioka 藤岡 剛 RIKEN BioResource Center 理化学...研究所バイオリソースセンター RIKEN BioResource Center 理化学研究所バイオリソースセンター Yukio Nakamura 中村 幸夫 Informat...ion Only RIKEN BioResource Center 理化学研究所バイオリソースセンター ... 20973836 10.1111/j.1749-

  17. Design of Integrated Database on Mobile Information System: A Study of Yogyakarta Smart City App

    Science.gov (United States)

    Nurnawati, E. K.; Ermawati, E.

    2018-02-01

    An integration database is a database which acts as the data store for multiple applications and thus integrates data across these applications (in contrast to an Application Database). An integration database needs a schema that takes all its client applications into account. The benefit of the schema that sharing data among applications does not require an extra layer of integration services on the applications. Any changes to data made in a single application are made available to all applications at the time of database commit - thus keeping the applications’ data use better synchronized. This study aims to design and build an integrated database that can be used by various applications in a mobile device based system platforms with the based on smart city system. The built-in database can be used by various applications, whether used together or separately. The design and development of the database are emphasized on the flexibility, security, and completeness of attributes that can be used together by various applications to be built. The method used in this study is to choice of the appropriate database logical structure (patterns of data) and to build the relational-database models (Design Databases). Test the resulting design with some prototype apps and analyze system performance with test data. The integrated database can be utilized both of the admin and the user in an integral and comprehensive platform. This system can help admin, manager, and operator in managing the application easily and efficiently. This Android-based app is built based on a dynamic clientserver where data is extracted from an external database MySQL. So if there is a change of data in the database, then the data on Android applications will also change. This Android app assists users in searching of Yogyakarta (as smart city) related information, especially in culture, government, hotels, and transportation.

  18. Long-term pavement performance information management system : pavement performance database user reference guide

    Science.gov (United States)

    2003-11-01

    This document provides information to aid in understanding and using the Long-Term Pavement Performance (LTPP) program pavement performance database. This document provides an introduction to the structure of the LTPP program, the relational structur...

  19. Stemcell Information: SKIP001164 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available plication (CiRA), Kyoto University 京都大学iPS細胞研究所 Yamanaka Shinya 山中 伸弥 Information Only ... 18035408 10.1016/j.cell... line derived from a healthy individual dermal fibroblasts. 健常人の皮膚線維芽細胞由来のヒトiPS細胞株。 human ES-like Rese... iPS Cell Research and Application (CiRA), Kyoto University 京都大学iPS細胞研究所 Center for iPS Cell Research and Ap... SKIP001164 ... Normal 246B1 246B1 ... 36 30-39 Female ... -- No Human iPS cell....2007.11.019 Induction of pluripotent stem cells from adult human fibrob

  20. Stemcell Information: SKIP000805 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available 610 ... 0-9 Male ... Yes No Hypochondrogenesis(S2011-43)-specific iPS cells. Ⅱ型コラーゲン異常症(軟骨低発生症)患者線維芽細胞(S2011-43)由来iPS細胞...r for iPS Cell Research and Application, Kyoto University 京都大学iPS細胞研究所 ... Information Only Center for iPS C...ell Research and Application,Kyoto University 京都大学iPS細胞研究所 CiRA https://www.cira.kyoto-u.ac.jp/e/index.html ...ia by directed conversion and induced pluripotent stem cells. Okada M, Ikegawa S, Morioka M, Yamashita A, Sa

  1. Stemcell Information: SKIP000798 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available II (ACG2) ... 200610 ... Fetus Female ... Yes No ACG II(GM07892)-specific iPS cells 軟骨無発生症患者線維芽細胞(GM07892)由来iPS細胞...S Cell Research and Application, Kyoto University 京都大学iPS細胞研究所 ... Information Only Center for iPS Cell Rese...arch and Application,Kyoto University 京都大学iPS細胞研究所 CiRA https://www.cira.kyoto-u.ac.jp/e/index.html ... 2518...rected conversion and induced pluripotent stem cells. Okada M, Ikegawa S, Morioka M, Yamashita A, Saito A, S

  2. Stemcell Information: SKIP000860 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available nese Japanese -- No hiPSC Generation from Peripheral Blood by using non-T medium | 末梢血由来iPS細胞。|T細胞の増殖には関与しない...沖田 圭介 Center for iPS Cell Research and Application, Kyoto University 京都大学iPS細胞研究所 ... Information Only Cente...r for iPS Cell Research and Application, Kyoto University 京都大学iPS細胞研究所 ... 23193...ral method to generate integration-free human-induced pluripotent stem cells from cord blood and peripheral blood cell

  3. Stemcell Information: SKIP000824 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available line, derived from fibloblast(JCRB TIG107). TIG107線維芽細胞由来iPS細胞。エピゾーマルベクターによる樹立、導入細胞...and ... No ... Keisuke Okita 沖田 圭介 Center for iPS Cell Research and Application, Kyoto University 京都大学iPS細胞研究所 ...Center for iPS Cell Research and Application, Kyoto University 京都大学iPS細胞研究所 Shiny...a Yamanaka 山中伸弥 Information Only Center for iPS Cell Research and Application, Kyoto University 京都大学iPS細胞研究所... SKIP000824 ... Normal 421C-1 421C-1 ... 81 80-89 Female Japanese Japanese -- No Human iPS cell

  4. Stemcell Information: SKIP001104 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available 0-9 Female ... -- No hiPSC Generation from Peripheral Blood (CD34+) by using non-T medium. 末梢血CD34陽性細胞由来iPS細胞。|T細胞... ... Keisuke Okita 沖田 圭介 Center for iPS Cell Research and Application, Kyoto University 京都大学iPS細胞研究所 ... Info...rmation Only Center for iPS Cell Research and Application, Kyoto University 京都大学iPS細胞...nerate integration-free human-induced pluripotent stem cells from cord blood and peripheral blood cells.--Ce

  5. Stemcell Information: SKIP001098 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available line derived from a neonate.(789013 KURABO)| 新生児皮膚繊維芽細胞(789013 KURABO)由来iPS細胞 human ES-like Res...ication, Kyoto University 京都大学iPS細胞研究所 ... Information Only Center for iPS Cell Research and Application,Kyoto University 京都大学iPS細胞... SKIP001098 ... Normal WT-2-#31 WT-2-#31 ... 0-9 Male ... -- No Nomal human iPS cell... Modeling type II collagenopathy skeletal dysplasia by directed conversion and in...duced pluripotent stem cells. Okada M, Ikegawa S, Morioka M, Yamashita A, Saito A, Sawai H, Murotsuki J, Oha

  6. Stemcell Information: SKIP001166 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available plication (CiRA), Kyoto University 京都大学iPS細胞研究所 Yamanaka Shinya 山中 伸弥 Information Only ... 18035408 10.1016/j.cell... line derived from a healthy individual dermal fibroblasts. 健常人の皮膚線維芽細胞由来のヒトiPS細胞株。 human ES-like Rese... iPS Cell Research and Application (CiRA), Kyoto University 京都大学iPS細胞研究所 Center for iPS Cell Research and Ap... SKIP001166 ... Normal 246B3 246B3 ... 36 30-39 Female ... -- No Human iPS cell....2007.11.019 Induction of pluripotent stem cells from adult human fibrob

  7. Stemcell Information: SKIP000802 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available pe II (ACG2) ... 200610 ... 0-9 Male ... Yes No ACG II(S2011-46)-specific iPS cells. Ⅱ型コラーゲン異常症患者線維芽細胞(S2011-46)由来iPS細胞...or iPS Cell Research and Application, Kyoto University 京都大学iPS細胞研究所 ... Information Only Center for iPS Cell... Research and Application,Kyoto University 京都大学iPS細胞研究所 CiRA https://www.cira.kyoto-u.ac.jp/e/index.html ... ...by directed conversion and induced pluripotent stem cells. Okada M, Ikegawa S, Morioka M, Yamashita A, Saito

  8. Stemcell Information: SKIP001100 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available line derived from a neonate.(789013 KURABO)| 新生児皮膚繊維芽細胞(789013 KURABO)由来iPS細胞 human ES-like Res...ication, Kyoto University 京都大学iPS細胞研究所 ... Information Only Center for iPS Cell Research and Application,Kyoto University 京都大学iPS細胞... SKIP001100 ... Normal WT-2-#33 WT-2-#33 ... 0-9 Male ... -- No Nomal human iPS cell... Modeling type II collagenopathy skeletal dysplasia by directed conversion and in...duced pluripotent stem cells. Okada M, Ikegawa S, Morioka M, Yamashita A, Saito A, Sawai H, Murotsuki J, Oha

  9. Stemcell Information: SKIP001173 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available plication (CiRA), Kyoto University 京都大学iPS細胞研究所 Yamanaka Shinya 山中 伸弥 Information Only ... 18035408 10.1016/j.cell... line derived from a healthy individual dermal fibroblasts. 健常人の皮膚線維芽細胞由来のヒトiPS細胞株。 human ES-like Rese... iPS Cell Research and Application (CiRA), Kyoto University 京都大学iPS細胞研究所 Center for iPS Cell Research and Ap... SKIP001173 ... Normal 253F2 253F2 ... 36 30-39 Female ... -- No Human iPS cell....2007.11.019 Induction of pluripotent stem cells from adult human fibrob

  10. Stemcell Information: SKIP001169 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available plication (CiRA), Kyoto University 京都大学iPS細胞研究所 Yamanaka Shinya 山中 伸弥 Information Only ... 18035408 10.1016/j.cell... line derived from a healthy individual dermal fibroblasts. 健常人の皮膚線維芽細胞由来のヒトiPS細胞株。 human ES-like Rese... iPS Cell Research and Application (CiRA), Kyoto University 京都大学iPS細胞研究所 Center for iPS Cell Research and Ap... SKIP001169 ... Normal 246B4 246B4 ... 36 30-39 Female ... -- No Human iPS cell....2007.11.019 Induction of pluripotent stem cells from adult human fibrob

  11. Stemcell Information: SKIP001159 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available ... 0-9 Male ... -- No Human iPS cell lines derived from BJ human foreskin fibroblasts. 新生児包皮から得た線維芽細胞由来のヒトiPS細胞... SKIP001159 ... BJ Human Foreskin Fibroblasts 新生児包皮由来の線維芽細胞 Unknown 246G6 246G6 ... ... Shinya 山中 伸弥 Center for iPS Cell Research and Application (CiRA), Kyoto University 京都大学iPS細胞研究所 Center for ...iPS Cell Research and Application (CiRA), Kyoto University 京都大学iPS細胞研究所 Yamanaka Shinya 山中 伸弥 Information On...ly ... 18035408--22146343 10.1016/j.cell.2007.11.019--10.1038/mt.2011.266 Indu

  12. Stemcell Information: SKIP000803 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available 610 ... 0-9 Male ... Yes No Hypochondrogenesis(S2011-43)-specific iPS cells. Ⅱ型コラーゲン異常症(軟骨低発生症)患者線維芽細胞(S2011-43)由来iPS細胞...r for iPS Cell Research and Application, Kyoto University 京都大学iPS細胞研究所 ... Information Only Center for iPS C...ell Research and Application,Kyoto University 京都大学iPS細胞研究所 CiRA https://www.cira.kyoto-u.ac.jp/e/index.html ...ia by directed conversion and induced pluripotent stem cells. Okada M, Ikegawa S, Morioka M, Yamashita A, Sa

  13. Stemcell Information: SKIP000796 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available s (iPSCs) 脊髄性筋萎縮症(Coriell GM03813)患者由来のiPS細胞 human ES-like Research Grade Other OCT...(CiRA), Kyoto University 京都大学iPS細胞研究所 ... Information Only Department of Clinical... Application, Center for iPS Cell Research and Application (CiRA), Kyoto University 京都大学iPS細胞研究所 http://www.... ATROPHY I; SMA1 253300 ... 3 0-9 Male ... Yes No SMA patient(Coriell IDs GM03813 Fibroblast)-derived induced pluripotent stem cell...3/4, SOX2, KLF4, L-MYC, LIN28 and p53 shRNA ... Yes SNL or MEF embryonic stem cell m

  14. Stemcell Information: SKIP001176 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available plication (CiRA), Kyoto University 京都大学iPS細胞研究所 Yamanaka Shinya 山中 伸弥 Information Only ... 18035408 10.1016/j.cell... line derived from a healthy individual dermal fibroblasts. 健常人の皮膚線維芽細胞由来のヒトiPS細胞株。 human ES-like Rese... iPS Cell Research and Application (CiRA), Kyoto University 京都大学iPS細胞研究所 Center for iPS Cell Research and Ap... SKIP001176 ... Normal 253F5 253F5 ... 36 30-39 Female ... -- No Human iPS cell....2007.11.019 Induction of pluripotent stem cells from adult human fibrob

  15. Stemcell Information: SKIP000862 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available nese Japanese -- No hiPSC Generation from Peripheral Blood by using non-T medium. 末梢血由来iPS細胞。|T細胞の増殖には関与しない培...suke Okita 沖田 圭介 Center for iPS Cell Research and Application, Kyoto University 京都大学iPS細胞研究所 ... Information... Only Center for iPS Cell Research and Application, Kyoto University 京都大学iPS細胞研究所... ... 23193063 10.1002/stem.1293 An efficient nonviral method to generate integration-free human-induced pluripotent stem cell...s from cord blood and peripheral blood cells. Okita K, Yamakawa T, Matsumura Y, Sato Y, Am

  16. Stemcell Information: SKIP001175 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available plication (CiRA), Kyoto University 京都大学iPS細胞研究所 Yamanaka Shinya 山中 伸弥 Information Only ... 18035408 10.1016/j.cell... line derived from a healthy individual dermal fibroblasts. 健常人の皮膚線維芽細胞由来のヒトiPS細胞株。 human ES-like Rese... iPS Cell Research and Application (CiRA), Kyoto University 京都大学iPS細胞研究所 Center for iPS Cell Research and Ap... SKIP001175 ... Normal 253F4 253F4 ... 36 30-39 Female ... -- No Human iPS cell....2007.11.019 Induction of pluripotent stem cells from adult human fibrob

  17. Stemcell Information: SKIP000858 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available to stimulate the proliferation of T cells. 末梢血由来iPS細胞。|T細胞の増殖を刺激する条件で作製を行った。 human ES-like Research Grade P... data suggested that the four iPS clones were derived from αβT cells.|αβT細胞由来であることを確認| ...ication, Kyoto University 京都大学iPS細胞研究所 ... Information Only Center for iPS Cell Research and Application, Kyoto University 京都大学iPS細胞...an-induced pluripotent stem cells from cord blood and peripheral blood cells.--Cell Therapy Using Human Indu... TRA locus and is excised coincident with TRA rearrangement during the maturation of αβT cells. Hence, these

  18. Stemcell Information: SKIP001156 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available ... 0-9 Male ... -- No Human iPS cell lines derived from BJ human foreskin fibroblasts. 新生児包皮から得た線維芽細胞由来のヒトiPS細胞... SKIP001156 ... BJ Human Foreskin Fibroblasts 新生児包皮由来の線維芽細胞 Unknown 246G3 246G3 ... ...amanaka Shinya 山中 伸弥 Center for iPS Cell Research and Application (CiRA), Kyoto University 京都大学iPS細胞研究所 Cent...er for iPS Cell Research and Application (CiRA), Kyoto University 京都大学iPS細胞研究所 Yamanaka Shinya 山中 伸弥 Informa...tion Only ... 18035408--22146343 10.1016/j.cell.2007.11.019--10.1038/mt.2011.2

  19. Stemcell Information: SKIP001165 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available plication (CiRA), Kyoto University 京都大学iPS細胞研究所 Yamanaka Shinya 山中 伸弥 Information Only ... 18035408 10.1016/j.cell... line derived from a healthy individual dermal fibroblasts. 健常人の皮膚線維芽細胞由来のヒトiPS細胞株。 human ES-like Rese... iPS Cell Research and Application (CiRA), Kyoto University 京都大学iPS細胞研究所 Center for iPS Cell Research and Ap... SKIP001165 ... Normal 246B2 246B2 ... 36 30-39 Female ... -- No Human iPS cell....2007.11.019 Induction of pluripotent stem cells from adult human fibrob

  20. Stemcell Information: SKIP001167 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available plication (CiRA), Kyoto University 京都大学iPS細胞研究所 Yamanaka Shinya 山中 伸弥 Information Only ... 18035408 10.1016/j.cell... line derived from a healthy individual dermal fibroblasts. 健常人の皮膚線維芽細胞由来のヒトiPS細胞株。 human ES-like Rese... iPS Cell Research and Application (CiRA), Kyoto University 京都大学iPS細胞研究所 Center for iPS Cell Research and Ap... SKIP001167 ... Normal 246B5 246B5 ... 36 30-39 Female ... -- No Human iPS cell....2007.11.019 Induction of pluripotent stem cells from adult human fibrob

  1. Stemcell Information: SKIP001168 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available plication (CiRA), Kyoto University 京都大学iPS細胞研究所 Yamanaka Shinya 山中 伸弥 Information Only ... 18035408 10.1016/j.cell... line derived from a healthy individual dermal fibroblasts. 健常人の皮膚線維芽細胞由来のヒトiPS細胞株。 human ES-like Rese... iPS Cell Research and Application (CiRA), Kyoto University 京都大学iPS細胞研究所 Center for iPS Cell Research and Ap... SKIP001168 ... Normal 246B6 246B6 ... 36 30-39 Female ... -- No Human iPS cell....2007.11.019 Induction of pluripotent stem cells from adult human fibrob

  2. Stemcell Information: SKIP001162 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available Research and Application (CiRA), Kyoto University 京都大学iPS細胞研究所 Yamanaka Shinya 山中 伸弥 Information Only ... 18035408 10.1016/j.cell... line derived from a healthy individual dermal fibroblasts. 健常人の皮膚線維芽細胞由来のヒトiPS細胞株。 human ES-like Rese...山中 伸弥 Center for iPS Cell Research and Application (CiRA), Kyoto University 京都大学iPS細胞研究所 Center for iPS Cell... SKIP001162 ... Normal 201B3 201B3 ... 36 30-39 Female ... -- No Human iPS cell....2007.11.019 Induction of pluripotent stem cells from ad

  3. Stemcell Information: SKIP000821 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available line, derived from fibloblast(Cell applications Inc. Lot1388). Lot1388線維芽細胞由来iPS細胞。エピゾーマルベクターによる樹立、導入細胞...No ... No ... Keisuke Okita 沖田 圭介 Center for iPS Cell Research and Application, Kyoto University 京都大学iPS細胞研究所 ...Center for iPS Cell Research and Application, Kyoto University 京都大学iPS細胞研究所 Shiny...a Yamanaka 山中伸弥 Information Only Center for iPS Cell Research and Application, Kyoto University 京都大学iPS細胞研究所... SKIP000821 ... Normal 404C-2 404C-2 ... 36 30-39 Female ... -- No Human iPS cell

  4. Stemcell Information: SKIP000800 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available type II (ACG2) ... 200610 ... 0-9 Male ... Yes No ACG II(S2011-46)-specific iPS cells. Ⅱ型コラーゲン異常症患者線維芽細胞(S2011-46)由来iPS細胞...r for iPS Cell Research and Application, Kyoto University 京都大学iPS細胞研究所 ... Information Only Center for iPS C...ell Research and Application,Kyoto University 京都大学iPS細胞研究所 CiRA https://www.cira.kyoto-u.ac.jp/e/index.html ...ia by directed conversion and induced pluripotent stem cells. Okada M, Ikegawa S, Morioka M, Yamashita A, Sa

  5. A Reaction Database for Small Molecule Pharmaceutical Processes Integrated with Process Information

    DEFF Research Database (Denmark)

    Papadakis, Emmanouil; Anantpinijwatna, Amata; Woodley, John

    2017-01-01

    This article describes the development of a reaction database with the objective to collect data for multiphase reactions involved in small molecule pharmaceutical processes with a search engine to retrieve necessary data in investigations of reaction-separation schemes, such as the role of organ...... the synthesis of ibuprofen, for which data on different reaction pathways have been retrieved from the database and compared using “green” chemistry metrics....... for each reaction and reference are also available in the database. Additionally, the retrieved information obtained from the database can be evaluated in terms of sustainability using well-known “green” metrics published in the scientific literature. The application of the database is illustrated through......This article describes the development of a reaction database with the objective to collect data for multiphase reactions involved in small molecule pharmaceutical processes with a search engine to retrieve necessary data in investigations of reaction-separation schemes, such as the role of organic...

  6. NIASGBdb: NIAS Genebank databases for genetic resources and plant disease information.

    Science.gov (United States)

    Takeya, Masaru; Yamasaki, Fukuhiro; Uzuhashi, Shihomi; Aoki, Takayuki; Sawada, Hiroyuki; Nagai, Toshirou; Tomioka, Keisuke; Tomooka, Norihiko; Sato, Toyozo; Kawase, Makoto

    2011-01-01

    The National Institute of Agrobiological Sciences (NIAS) is implementing the NIAS Genebank Project for conservation and promotion of agrobiological genetic resources to contribute to the development and utilization of agriculture and agricultural products. The project's databases (NIASGBdb; http://www.gene.affrc.go.jp/databases_en.php) consist of a genetic resource database and a plant diseases database, linked by a web retrieval database. The genetic resources database has plant and microorganism search systems to provide information on research materials, including passport and evaluation data for genetic resources with the desired properties. To facilitate genetic diversity research, several NIAS Core Collections have been developed. The NIAS Rice (Oryza sativa) Core Collection of Japanese Landraces contains information on simple sequence repeat (SSR) polymorphisms. SSR marker information for azuki bean (Vigna angularis) and black gram (V. mungo) and DNA sequence data from some selected Japanese strains of the genus Fusarium are also available. A database of plant diseases in Japan has been developed based on the listing of common names of plant diseases compiled by the Phytopathological Society of Japan. Relevant plant and microorganism genetic resources are associated with the plant disease names by the web retrieval database and can be obtained from the NIAS Genebank for research or educational purposes.

  7. Stemcell Information: SKIP001101 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available SKIP001101 ... o induced chondrogenic (iChon) cells ダイレクトリプログラミングで作製した軟骨細胞 ... Normal ...man Dermal Fibroblasts(1439 KURABO). 新生児皮膚繊維芽細胞(1439 KURABO)をダイレクトリプログラミングにより軟骨細胞へと誘導(iChon細胞) Other Researc... Kyoto University 京都大学iPS細胞研究所 ... Information Only Center for iPS Cell Research ...and Application,Kyoto University 京都大学iPS細胞研究所 CiRA https://www.cira.kyoto-u.ac.jp/e/index.html ... 25187577 ...WT-1-iChon WT-1-iChon ... 0-9 Male ... -- No Direct iInduction of Chondrogenic(iChon) cells from Hu

  8. Stemcell Information: SKIP001103 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available SKIP001103 ... induced chondrogenic (iChon) cells ダイレクトリプログラミングで作製した軟骨細胞 ... Diseased ...s have elevated ER stress and undergo apoptosis. 軟骨無発症患者線維芽細胞(GM07892)をダイレクトリプログラミングにより軟骨細胞...へと誘導(iChon細胞)。|小胞体ストレスが生じ、過度のアポトーシスが引き起こされていた。 Other Research Grade Retrovirus c-MYC, KLF4... ... Minoru Okada 岡田 稔 Center for iPS Cell Research and Application, Kyoto University 京都大学iPS細胞研究所... ... Information Only Center for iPS Cell Research and Application,Kyoto University 京都大学iPS細胞研究所 CiRA https:

  9. Stemcell Information: SKIP001102 [SKIP Stemcell Database[Archive

    Lifescience Database Archive (English)

    Full Text Available SKIP001102 ... induced chondrogenic (iChon) cells ダイレクトリプログラミングで作製した軟骨細胞 ... Normal WT...n Dermal Fibroblasts(789013 KURABO). 新生児皮膚繊維芽細胞(789013 KURABO)をダイレクトリプログラミングにより軟骨細胞へと誘導(iChon細胞) Other Resea...n, Kyoto University 京都大学iPS細胞研究所 ... Information Only Center for iPS Cell Researc...h and Application,Kyoto University 京都大学iPS細胞研究所 CiRA https://www.cira.kyoto-u.ac.jp/e/index.html ... 2518757...-2-iChon WT-2-iChon ... 0-9 Male ... -- No Direct iInduction of Chondrogenic(iChon) cells from Huma

  10. Search Strategies in Nanotechnology Databases: Log Analysis. Journal of Information Processing and Management

    Directory of Open Access Journals (Sweden)

    Nadjla Hariri

    2014-03-01

    Full Text Available Major concern of users of information systems is information retrieval related their information needs, query used by the users is a manifestation of their information needs. The research purpose is to analyze databases of nanotechnology through the query analysis and follow-up users navigation. The research method is transaction log analysis. This study was performed through the analysis of the interaction between users and the database transaction files. Results show that nanothechnology databases users using three methods to retrieve information needs: search engines, referral sites and directly use. In the used directly Bounce Rate have been lower and more pages have been visited. The average length of query is 3.36. And easier search strategies are used to retrieve information.

  11. Awareness, perception and barriers to seeking information from online academic databases and medical journals as sources of information.

    Science.gov (United States)

    Wong, Li Ping; Mohamad Shakir, Sharina Mahavera; Tong, Wen Ting; Alias, Haridah; Aghamohammadi, Nasrin; Arumugam, Kulenthran

    2017-10-16

    Medical students' use of online medical journals as a source of information is crucial in the learning pathway to become medical doctors. We conducted a cross-sectional survey study among University medical students between December 2012 and March 2013 to assess their awareness, perceived usefulness, practices, and barriers to seeking information from online academic databases and medical journals. The response rate was 67.53%. The majority of the students knew of the availability of online academic databases and medical journals. The mean score for awareness (4.25 of possible 11.0), perceived usefulness (13.95 of possible 33.0), and practice (10.67 of possible 33.0) were low. The mean barrier score toward using online academic databases and medical journals was 25.41 (of possible 45.0). Multivariate findings showed that significant barriers associated with overall usage of online databases and medical journals were 1) not knowing where or how to locate databases and 2) unsureness of using the Boolean operators. Availability of full text subscriptions was found to be an important factor in using online databases. Study findings highlighted the need to increase awareness of academic databases' availability and increase training on ways to search online academic databases and medical journals.

  12. Editorial: Biotechnology Journal brings more than biotechnology.

    Science.gov (United States)

    Jungbauer, Alois; Lee, Sang Yup

    2015-09-01

    Biotechnology Journal always brings the state-of-the-art biotechnologies to our readers. Different from other topical issues, this issue of Biotechnology Journal is complied with a series of exiting reviews and research articles from spontaneous submissions, again, addressing society's actual problems and needs. The progress is a real testimony how biotechnology contributes to achievements in healthcare, better utilization of resources, and a bio-based economy. Copyright © 2015 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

  13. Editorial: Biotechnology Journal's diverse coverage of biotechnology.

    Science.gov (United States)

    Wink, Michael

    2014-03-01

    This issue of Biotechnology Journal is a regular issue edited by Prof. Michael Wink. The issue covers all the major focus areas of the journal, including medical biotechnology, synthetic biology, and novel biotechnological methods. Copyright © 2014 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

  14. A proposal for a drug information database and text templates for generating package inserts

    Directory of Open Access Journals (Sweden)

    Okuya R

    2013-07-01

    Full Text Available Ryo Okuya,1 Masaomi Kimura,2 Michiko Ohkura,2 Fumito Tsuchiya3 1Graduate School of Engineering and Science, 2Faculty of Engineering, Shibaura Institute of Technology, Tokyo, 3School of Pharmacy, International University of Health and Welfare, Tokyo, Japan Abstract: To prevent prescription errors caused by information systems, a database to store complete and accurate drug information in a user-friendly format is needed. In previous studies, the primary method for obtaining data stored in a database is to extract drug information from package inserts by employing pattern matching or more sophisticated methods such as text mining. However, it is difficult to obtain a complete database because there is no strict rule concerning expressions used to describe drug information in package inserts. The authors' strategy was to first build a database and then automatically generate package inserts by embedding data in the database using templates. To create this database, the support of pharmaceutical companies to input accurate data is required. It is expected that this system will work, because these companies can earn merit for newly developed drugs to decrease the effort to create package inserts from scratch. This study designed the table schemata for the database and text templates to generate the package inserts. To handle the variety of drug-specific information in the package inserts, this information in drug composition descriptions was replaced with labels and the replacement descriptions utilizing cluster analysis were analyzed. To improve the method by which frequently repeated ingredient information and/or supplementary information are stored, the method was modified by introducing repeat tags in the templates to indicate repetition and improving the insertion of data into the database. The validity of this method was confirmed by inputting the drug information described in existing package inserts and checking that the method could

  15. A distributed database system for sharing geological information using free and open source software

    Science.gov (United States)

    Nemoto, T.; Masumoto, S.; Nonogaki, S.; Raghavan, V.

    2013-12-01

    Recently, geological information, such as borehole data and geological maps, and seismic, volcanic or landslide hazard maps are published on the Internet by the national government, local governments, and research institutes in Japan. Most web systems that deliver such geological information consist of a centralized database, which are located and maintained in one location. It is easier to manage the centralized database system because all data resides in a single location. However, if the database breaks, the web service will not be available. In the present study, a distributed database system has been developed to continue delivering geological information even if a database breaks. The distributed database system has an advantage that the system remains available although an individual database is down. All the software used to construct the system is free and open source software. PostgreSQL and pgpool-II are utilized to construct a distributed database. PostgreSQL is a powerful relational database management system. Pgpool-II has a function for management of multiple PostgreSQL servers. OpenLayers is used for the web map clients. Replication and Parallel query modes with pgpool-II are utilized for distribution of a database. It is possible to create a real-time backup on 2 or more PostgreSQL clusters by replication mode. If a database breaks, the backup database will works to continue delivering geological information. Data can be split among multiple servers by using parallel query mode. The rules to send partitioned data to an appropriate cluster are contained in the System Database. If large-scale data is searched, the overall execution time will be reduced. The prototype for sharing 1500 borehole data has been successfully implemented by combination of PostgreSQL and pgpool-II on Linux server. Further development and improvement of the system are necessary to manage and analyze various spatial data in addition to borehole data. This study was supported

  16. Information Seeking Behavior of the Nurses in Using Up-To-Date Database

    Directory of Open Access Journals (Sweden)

    Ebrahim Aghazadeh Asl

    2017-10-01

    Full Text Available Background and Objectives: Nursing is one of the largest groups of health care providers that needs updated information to improve quality and quantity of health care services, clinical activities, etc. In the meantime, evidence-based databases (such as Up-To-Date Database significantly contribute to improve performance and efficiency of health services by providing the latest findings on health issues. The present study aimed to survey the information seeking behavior and information needs of nurses working in Ahvaz hospitals affiliated with Jundishapur University of Medical Sciences in using Up-To-Date database. Material and Methods: In this descriptive-analytical study, the statistical population consisted of 1246 nurses working in hospitals of Ahvaz University of Medical Sciences among which 293 nurses were selected. The required data were collected using a questionnaire developed by the researcher. Validity and reliability of the questionnaire were confirmed by Cronbach's alpha coefficient as 0.71. Descriptive statistics and Kruskal-Wallis Test were used for data analysis. Results: The results showed that most of the nurses needed information about new developments in the field of nursing and medications. A majority of the nurses used simple searching technique to find the required information. Most of the nurses aimed to update their information using Up-To-Date Database. The main barrier to update information was shortage of time. Conclusion: Therefore, it is essential to teach information skills to nurses; so that they can access modern and updated information in the field of nursing and obtain

  17. Development of the severe accident risk information database management system SARD

    Energy Technology Data Exchange (ETDEWEB)

    Ahn, Kwang Il; Kim, Dong Ha

    2003-01-01

    The main purpose of this report is to introduce essential features and functions of a severe accident risk information management system, SARD (Severe Accident Risk Database Management System) version 1.0, which has been developed in Korea Atomic Energy Research Institute, and database management and data retrieval procedures through the system. The present database management system has powerful capabilities that can store automatically and manage systematically the plant-specific severe accident analysis results for core damage sequences leading to severe accidents, and search intelligently the related severe accident risk information. For that purpose, the present database system mainly takes into account the plant-specific severe accident sequences obtained from the Level 2 Probabilistic Safety Assessments (PSAs), base case analysis results for various severe accident sequences (such as code responses and summary for key-event timings), and related sensitivity analysis results for key input parameters/models employed in the severe accident codes. Accordingly, the present database system can be effectively applied in supporting the Level 2 PSA of similar plants, for fast prediction and intelligent retrieval of the required severe accident risk information for the specific plant whose information was previously stored in the database system, and development of plant-specific severe accident management strategies.

  18. Flight Deck Interval Management Display. [Elements, Information and Annunciations Database User Guide

    Science.gov (United States)

    Lancaster, Jeff; Dillard, Michael; Alves, Erin; Olofinboba, Olu

    2014-01-01

    The User Guide details the Access Database provided with the Flight Deck Interval Management (FIM) Display Elements, Information, & Annunciations program. The goal of this User Guide is to support ease of use and the ability to quickly retrieve and select items of interest from the Database. The Database includes FIM Concepts identified in a literature review preceding the publication of this document. Only items that are directly related to FIM (e.g., spacing indicators), which change or enable FIM (e.g., menu with control buttons), or which are affected by FIM (e.g., altitude reading) are included in the database. The guide has been expanded from previous versions to cover database structure, content, and search features with voiced explanations.

  19. Use of Genomic Databases for Inquiry-Based Learning about Influenza

    Science.gov (United States)

    Ledley, Fred; Ndung'u, Eric

    2011-01-01

    The genome projects of the past decades have created extensive databases of biological information with applications in both research and education. We describe an inquiry-based exercise that uses one such database, the National Center for Biotechnology Information Influenza Virus Resource, to advance learning about influenza. This database…

  20. A proposed key escrow system for secure patient information disclosure in biomedical research databases.

    Science.gov (United States)

    Ferris, Todd A; Garrison, Gregory M; Lowe, Henry J

    2002-01-01

    Access to clinical data is of increasing importance to biomedical research. The pending HIPAA privacy regulations provide specific requirements for the release of protected health information. Under the regulations, biomedical researchers may utilize anonymized data, or adhere to HIPAA requirements regarding protected health information. In order to provide researchers with anonymized data from a clinical research database, we reviewed several published strategies for de-identification of protected health information. Critical analysis with respect to this project suggests that de-identification alone is problematic when applied to clinical research databases. We propose a hybrid system; utilizing secure key escrow, de-identification, and role-based access for IRB approved researchers.

  1. Forest Vegetation Simulator translocation techniques with the Bureau of Land Management's Forest Vegetation Information system database

    Science.gov (United States)

    Timothy A. Bottomley

    2008-01-01

    The BLM uses a database, called the Forest Vegetation Information System (FORVIS), to store, retrieve, and analyze forest resource information on a majority of their forested lands. FORVIS also has the capability of easily transferring appropriate data electronically into Forest Vegetation Simulator (FVS) for simulation runs. Only minor additional data inputs or...

  2. Towards BioDBcore: a community-defined information specification for biological databases.

    Science.gov (United States)

    Gaudet, Pascale; Bairoch, Amos; Field, Dawn; Sansone, Susanna-Assunta; Taylor, Chris; Attwood, Teresa K; Bateman, Alex; Blake, Judith A; Bult, Carol J; Cherry, J Michael; Chisholm, Rex L; Cochrane, Guy; Cook, Charles E; Eppig, Janan T; Galperin, Michael Y; Gentleman, Robert; Goble, Carole A; Gojobori, Takashi; Hancock, John M; Howe, Douglas G; Imanishi, Tadashi; Kelso, Janet; Landsman, David; Lewis, Suzanna E; Mizrachi, Ilene Karsch; Orchard, Sandra; Ouellette, B F Francis; Ranganathan, Shoba; Richardson, Lorna; Rocca-Serra, Philippe; Schofield, Paul N; Smedley, Damian; Southan, Christopher; Tan, Tin Wee; Tatusova, Tatiana; Whetzel, Patricia L; White, Owen; Yamasaki, Chisato

    2011-01-01

    The present article proposes the adoption of a community-defined, uniform, generic description of the core attributes of biological databases, BioDBCore. The goals of these attributes are to provide a general overview of the database landscape, to encourage consistency and interoperability between resources and to promote the use of semantic and syntactic standards. BioDBCore will make it easier for users to evaluate the scope and relevance of available resources. This new resource will increase the collective impact of the information present in biological databases.

  3. Towards BioDBcore: a community-defined information specification for biological databases

    Science.gov (United States)

    Gaudet, Pascale; Bairoch, Amos; Field, Dawn; Sansone, Susanna-Assunta; Taylor, Chris; Attwood, Teresa K.; Bateman, Alex; Blake, Judith A.; Bult, Carol J.; Cherry, J. Michael; Chisholm, Rex L.; Cochrane, Guy; Cook, Charles E.; Eppig, Janan T.; Galperin, Michael Y.; Gentleman, Robert; Goble, Carole A.; Gojobori, Takashi; Hancock, John M.; Howe, Douglas G.; Imanishi, Tadashi; Kelso, Janet; Landsman, David; Lewis, Suzanna E.; Mizrachi, Ilene Karsch; Orchard, Sandra; Ouellette, B. F. Francis; Ranganathan, Shoba; Richardson, Lorna; Rocca-Serra, Philippe; Schofield, Paul N.; Smedley, Damian; Southan, Christopher; Tan, Tin Wee; Tatusova, Tatiana; Whetzel, Patricia L.; White, Owen; Yamasaki, Chisato

    2011-01-01

    The present article proposes the adoption of a community-defined, uniform, generic description of the core attributes of biological databases, BioDBCore. The goals of these attributes are to provide a general overview of the database landscape, to encourage consistency and interoperability between resources and to promote the use of semantic and syntactic standards. BioDBCore will make it easier for users to evaluate the scope and relevance of available resources. This new resource will increase the collective impact of the information present in biological databases. PMID:21097465

  4. YAC clone information - RGP physicalmap | LSDB Archive [Life Science Database Archive metadata

    Lifescience Database Archive (English)

    Full Text Available 08/lsdba.nbdc00318-06-002 Description of data contents YAC clones selected with DNA markers Data file File name: rgp_physical...map_yac_clones.zip File URL: ftp://ftp.biosciencedbc.jp/archive/rgp-physicalmap/LATEST/rgp_physical...sciencedbc.jp/togodb/view/rgp_physicalmap_yac_clones#en Data acquisition method YAC clones selected with RGP...rom. No. Chromosome number Region Region number Physical map image The file name of rice physical map Order ...bout This Database Database Description Download License Update History of This Database Site Policy | Contact Us YAC clone information - RGP physicalmap | LSDB Archive ...

  5. Working out a database information systems for institution of additional educations of children

    Directory of Open Access Journals (Sweden)

    Алексей Борисович Щеголев

    2015-12-01

    Full Text Available The object of research is the activity of institutions of additional education of children in Moscow region. With use of tool CASE simulars and the analysis of business processes process models of their functioning are under construction. By means of tools for creation of models of data models and generation of schemes of databases models of a database of information system of establishment of additional education of children are developed.

  6. Seventy Years of RN Effectiveness: A Database Development Project to Inform Best Practice.

    Science.gov (United States)

    Lulat, Zainab; Blain-McLeod, Julie; Grinspun, Doris; Penney, Tasha; Harripaul-Yhap, Anastasia; Rey, Michelle

    2018-03-23

    The appropriate nursing staff mix is imperative to the provision of quality care. Nurse staffing levels and staff mix vary from country to country, as well as between care settings. Understanding how staffing skill mix impacts patient, organizational, and financial outcomes is critical in order to allow policymakers and clinicians to make evidence-informed staffing decisions. This paper reports on the methodology for creation of an electronic database of studies exploring the effectiveness of Registered Nurses (RNs) on clinical and patient outcomes, organizational and nurse outcomes, and financial outcomes. Comprehensive literature searches were conducted in four electronic databases. Inclusion criteria for the database included studies published from 1946 to 2016, peer-reviewed international literature, and studies focused on RNs in all health-care disciplines, settings, and sectors. Masters-prepared nurse researchers conducted title and abstract screening and relevance review to determine eligibility of studies for the database. High-level analysis was conducted to determine key outcomes and the frequency at which they appeared within the database. Of the initial 90,352 records, a total of 626 abstracts were included within the database. Studies were organized into three groups corresponding to clinical and patient outcomes, organizational and nurse-related outcomes, and financial outcomes. Organizational and nurse-related outcomes represented the largest category in the database with 282 studies, followed by clinical and patient outcomes with 244 studies, and lastly financial outcomes, which included 124 studies. The comprehensive database of evidence for RN effectiveness is freely available at https://rnao.ca/bpg/initiatives/RNEffectiveness. The database will serve as a resource for the Registered Nurses' Association of Ontario, as well as a tool for researchers, clinicians, and policymakers for making evidence-informed staffing decisions. © 2018 The Authors

  7. Preferance of computer technology for analytical support of large database of medical information systems

    Directory of Open Access Journals (Sweden)

    Biryukov А.P.

    2013-12-01

    Full Text Available Aim: to study the use of intelligent technologies for analytical support of large databases of medical information systems. Material and methods. We used the techniques of object-oriented software design and database design. Results. Based on expert review of models and algorithms for analysis of clinical and epidemiological data and principles of knowledge representation in large-scale health information systems, data mining schema were implemented in the software package of the register of Research Center n.a. A. I. Burnazyan of Russia. Identified areas for effective implementation of abstract data model of EAV and procedures Data Maning for the design of database of biomedical registers. Conclusions. Using intelligent software platform that supports different sets of APIs and object models for different operations in different software environments, allows you to build and maintain an information system through the procedures of data biomedical processing.

  8. A database system for the management of severe accident risk information, SARD

    Energy Technology Data Exchange (ETDEWEB)

    Ahn, K. I.; Kim, D. H. [KAERI, Taejon (Korea, Republic of)

    2003-10-01

    The purpose of this paper is to introduce main features and functions of a PC Windows-based database management system, SARD, which has been developed at Korea Atomic Energy Research Institute for automatic management and search of the severe accident risk information. Main functions of the present database system are implemented by three closely related, but distinctive modules: (1) fixing of an initial environment for data storage and retrieval, (2) automatic loading and management of accident information, and (3) automatic search and retrieval of accident information. For this, the present database system manipulates various form of the plant-specific severe accident risk information, such as dominant severe accident sequences identified from the plant-specific Level 2 Probabilistic Safety Assessment (PSA) and accident sequence-specific information obtained from the representative severe accident codes (e.g., base case and sensitivity analysis results, and summary for key plant responses). The present database system makes it possible to implement fast prediction and intelligent retrieval of the required severe accident risk information for various accident sequences, and in turn it can be used for the support of the Level 2 PSA of similar plants and for the development of plant-specific severe accident management strategies.

  9. Northeast India Helminth Parasite Information Database (NEIHPID): Knowledge Base for Helminth Parasites.

    Science.gov (United States)

    Biswal, Devendra Kumar; Debnath, Manish; Kharumnuid, Graciously; Thongnibah, Welfrank; Tandon, Veena

    2016-01-01

    Most metazoan parasites that invade vertebrate hosts belong to three phyla: Platyhelminthes, Nematoda and Acanthocephala. Many of the parasitic members of these phyla are collectively known as helminths and are causative agents of many debilitating, deforming and lethal diseases of humans and animals. The North-East India Helminth Parasite Information Database (NEIHPID) project aimed to document and characterise the spectrum of helminth parasites in the north-eastern region of India, providing host, geographical distribution, diagnostic characters and image data. The morphology-based taxonomic data are supplemented with information on DNA sequences of nuclear, ribosomal and mitochondrial gene marker regions that aid in parasite identification. In addition, the database contains raw next generation sequencing (NGS) data for 3 foodborne trematode parasites, with more to follow. The database will also provide study material for students interested in parasite biology. Users can search the database at various taxonomic levels (phylum, class, order, superfamily, family, genus, and species), or by host, habitat and geographical location. Specimen collection locations are noted as co-ordinates in a MySQL database and can be viewed on Google maps, using Google Maps JavaScript API v3. The NEIHPID database has been made freely available at http://nepiac.nehu.ac.in/index.php.

  10. Northeast India Helminth Parasite Information Database (NEIHPID): Knowledge Base for Helminth Parasites

    Science.gov (United States)

    Debnath, Manish; Kharumnuid, Graciously; Thongnibah, Welfrank; Tandon, Veena

    2016-01-01

    Most metazoan parasites that invade vertebrate hosts belong to three phyla: Platyhelminthes, Nematoda and Acanthocephala. Many of the parasitic members of these phyla are collectively known as helminths and are causative agents of many debilitating, deforming and lethal diseases of humans and animals. The North-East India Helminth Parasite Information Database (NEIHPID) project aimed to document and characterise the spectrum of helminth parasites in the north-eastern region of India, providing host, geographical distribution, diagnostic characters and image data. The morphology-based taxonomic data are supplemented with information on DNA sequences of nuclear, ribosomal and mitochondrial gene marker regions that aid in parasite identification. In addition, the database contains raw next generation sequencing (NGS) data for 3 foodborne trematode parasites, with more to follow. The database will also provide study material for students interested in parasite biology. Users can search the database at various taxonomic levels (phylum, class, order, superfamily, family, genus, and species), or by host, habitat and geographical location. Specimen collection locations are noted as co-ordinates in a MySQL database and can be viewed on Google maps, using Google Maps JavaScript API v3. The NEIHPID database has been made freely available at http://nepiac.nehu.ac.in/index.php PMID:27285615

  11. Northeast India Helminth Parasite Information Database (NEIHPID: Knowledge Base for Helminth Parasites.

    Directory of Open Access Journals (Sweden)

    Devendra Kumar Biswal

    Full Text Available Most metazoan parasites that invade vertebrate hosts belong to three phyla: Platyhelminthes, Nematoda and Acanthocephala. Many of the parasitic members of these phyla are collectively known as helminths and are causative agents of many debilitating, deforming and lethal diseases of humans and animals. The North-East India Helminth Parasite Information Database (NEIHPID project aimed to document and characterise the spectrum of helminth parasites in the north-eastern region of India, providing host, geographical distribution, diagnostic characters and image data. The morphology-based taxonomic data are supplemented with information on DNA sequences of nuclear, ribosomal and mitochondrial gene marker regions that aid in parasite identification. In addition, the database contains raw next generation sequencing (NGS data for 3 foodborne trematode parasites, with more to follow. The database will also provide study material for students interested in parasite biology. Users can search the database at various taxonomic levels (phylum, class, order, superfamily, family, genus, and species, or by host, habitat and geographical location. Specimen collection locations are noted as co-ordinates in a MySQL database and can be viewed on Google maps, using Google Maps JavaScript API v3. The NEIHPID database has been made freely available at http://nepiac.nehu.ac.in/index.php.

  12. Biomedical text summarization to support genetic database curation: using Semantic MEDLINE to create a secondary database of genetic information.

    Science.gov (United States)

    Workman, T Elizabeth; Fiszman, Marcelo; Hurdle, John F; Rindflesch, Thomas C

    2010-10-01

    This paper examines the development and evaluation of an automatic summarization system in the domain of molecular genetics. The system is a potential component of an advanced biomedical information management application called Semantic MEDLINE and could assist librarians in developing secondary databases of genetic information extracted from the primary literature. An existing summarization system was modified for identifying biomedical text relevant to the genetic etiology of disease. The summarization system was evaluated on the task of identifying data describing genes associated with bladder cancer in MEDLINE citations. A gold standard was produced using records from Genetics Home Reference and Online Mendelian Inheritance in Man. Genes in text found by the system were compared to the gold standard. Recall, precision, and F-measure were calculated. The system achieved recall of 46%, and precision of 88% (F-measure=0.61) by taking Gene References into Function (GeneRIFs) into account. The new summarization schema for genetic etiology has potential as a component in Semantic MEDLINE to support the work of data curators.

  13. Teaching Three-Dimensional Structural Chemistry Using Crystal Structure Databases. 3. The Cambridge Structural Database System: Information Content and Access Software in Educational Applications

    Science.gov (United States)

    Battle, Gary M.; Allen, Frank H.; Ferrence, Gregory M.

    2011-01-01

    Parts 1 and 2 of this series described the educational value of experimental three-dimensional (3D) chemical structures determined by X-ray crystallography and retrieved from the crystallographic databases. In part 1, we described the information content of the Cambridge Structural Database (CSD) and discussed a representative teaching subset of…

  14. 17th East European Conference on Advances in Databases and Information Systems and Associated Satellite Events

    CERN Document Server

    Cerquitelli, Tania; Chiusano, Silvia; Guerrini, Giovanna; Kämpf, Mirko; Kemper, Alfons; Novikov, Boris; Palpanas, Themis; Pokorný, Jaroslav; Vakali, Athena

    2014-01-01

    This book reports on state-of-art research and applications in the field of databases and information systems. It includes both fourteen selected short contributions, presented at the East-European Conference on Advances in Databases and Information Systems (ADBIS 2013, September 1-4, Genova, Italy), and twenty-six papers from ADBIS 2013 satellite events. The short contributions from the main conference are collected in the first part of the book, which covers a wide range of topics, like data management, similarity searches, spatio-temporal and social network data, data mining, data warehousing, and data management on novel architectures, such as graphics processing units, parallel database management systems, cloud and MapReduce environments. In contrast, the contributions from the satellite events are organized in five different parts, according to their respective ADBIS satellite event: BiDaTA 2013 - Special Session on Big Data: New Trends and Applications); GID 2013 – The Second International Workshop ...

  15. Information retrieved from a database and the augmentation of personal knowledge.

    Science.gov (United States)

    de Bliek, R; Friedman, C P; Wildemuth, B M; Martz, J M; Twarog, R G; File, D

    1994-01-01

    OBJECTIVE: To assess the degree to which information retrieved from a biomedical database can augment personal knowledge in addressing novel problems, and how the ability to retrieve information evolves over time. DESIGN: This longitudinal study comprised three assessments of two cohorts of medical students. The first assessment occurred just before student course experience in bacteriology, the second occurred just after the course, and the third occurred five months later. At each assessment, the students were initially given a set of bacteriology problems to solve using their personal knowledge only. Each student was then reassigned a sample of problems he or she had answered incorrectly, to work again with assistance from a database containing information about bacteria and bacteriologic concepts. The initial pass through the problems generated a "personal knowledge" score; the second pass generated a "database-assisted" score for each student at each assessment. RESULTS: Over two cohorts, students' personal knowledge scores were very low (approximately 12%) at the first assessment. They rose substantially at the second assessment (approximately 48%) but decreased six months later (approximately 25%). By contrast, database-assisted scores rose linearly: from approximately 44% at the first assessment to approximately 57% at the second assessment, to approximately 75% at the third assessment. CONCLUSION: The persistent increase in database-assisted scores, even when personal knowledge had attenuated, was the most remarkable finding of this study. While some of the increase may be attributed to artifacts of the design, the pattern seems to result from the retained ability to recognize problem-relevant information in a database even when it cannot be recalled. PMID:7719819

  16. Operation environment construction of geological information database for high level radioactive waste geological disposal

    International Nuclear Information System (INIS)

    Wang Peng; Gao Min; Huang Shutao; Wang Shuhong; Zhao Yongan

    2014-01-01

    To fulfill the requirements of data storage and management in HLW geological disposal, a targeted construction method for data operation environment was proposed in this paper. The geological information database operation environment constructed by this method has its unique features. And it also will be the important support for HLW geological disposal project and management. (authors)

  17. Content-based organization of the information space in multi-database networks

    NARCIS (Netherlands)

    Papazoglou, M.; Milliner, S.

    1998-01-01

    Abstract. Rapid growth in the volume of network-available data, complexity, diversity and terminological fluctuations, at different data sources, render network-accessible information increasingly difficult to achieve. The situation is particularly cumbersome for users of multi-database systems who

  18. Historical land use databases: a new layer of information for geographical research

    NARCIS (Netherlands)

    Kramer, H.; Mücher, C.A.; Hazeu, G.W.

    2011-01-01

    In this paper we describe how historical land use information has been derived for the whole of Europe, using the World Atlas of Agriculture, scale 1: 2,500,000. This paper describes the process of converting the analog land-use maps to a digital European historical land-use database, the Historical

  19. Discovering More Chemical Concepts from 3D Chemical Information Searches of Crystal Structure Databases

    Science.gov (United States)

    Rzepa, Henry S.

    2016-01-01

    Three new examples are presented illustrating three-dimensional chemical information searches of the Cambridge structure database (CSD) from which basic core concepts in organic and inorganic chemistry emerge. These include connecting the regiochemistry of aromatic electrophilic substitution with the geometrical properties of hydrogen bonding…

  20. 16th East-European Conference on Advances in Databases and Information Systems (ADBIS 2012)

    CERN Document Server

    Wojciechowski, Marek; New Trends in Databases and Information Systems

    2013-01-01

    Database and information systems technologies have been rapidly evolving in several directions over the past years. New types and kinds of data, new types of applications and information systems to support them raise diverse challenges to be addressed. The so-called big data challenge, streaming data management and processing, social networks and other complex data analysis, including semantic reasoning into information systems supporting for instance trading, negotiations, and bidding mechanisms are just some of the emerging research topics. This volume contains papers contributed by six workshops: ADBIS Workshop on GPUs in Databases (GID 2012), Mining Complex and Stream Data (MCSD'12), International Workshop on Ontologies meet Advanced Information Systems (OAIS'2012), Second Workshop on Modeling Multi-commodity Trade: Data models and processing (MMT'12), 1st ADBIS Workshop on Social Data Processing (SDP'12), 1st ADBIS Workshop on Social and Algorithmic Issues in Business Support (SAIBS), and the Ph.D. Conso...

  1. VaProS: a database-integration approach for protein/genome information retrieval

    KAUST Repository

    Gojobori, Takashi

    2016-12-24

    Life science research now heavily relies on all sorts of databases for genome sequences, transcription, protein three-dimensional (3D) structures, protein–protein interactions, phenotypes and so forth. The knowledge accumulated by all the omics research is so vast that a computer-aided search of data is now a prerequisite for starting a new study. In addition, a combinatory search throughout these databases has a chance to extract new ideas and new hypotheses that can be examined by wet-lab experiments. By virtually integrating the related databases on the Internet, we have built a new web application that facilitates life science researchers for retrieving experts’ knowledge stored in the databases and for building a new hypothesis of the research target. This web application, named VaProS, puts stress on the interconnection between the functional information of genome sequences and protein 3D structures, such as structural effect of the gene mutation. In this manuscript, we present the notion of VaProS, the databases and tools that can be accessed without any knowledge of database locations and data formats, and the power of search exemplified in quest of the molecular mechanisms of lysosomal storage disease. VaProS can be freely accessed at http://p4d-info.nig.ac.jp/vapros/.

  2. ExtraTrain: a database of Extragenic regions and Transcriptional information in prokaryotic organisms

    Science.gov (United States)

    Pareja, Eduardo; Pareja-Tobes, Pablo; Manrique, Marina; Pareja-Tobes, Eduardo; Bonal, Javier; Tobes, Raquel

    2006-01-01

    Background Transcriptional regulation processes are the principal mechanisms of adaptation in prokaryotes. In these processes, the regulatory proteins and the regulatory DNA signals located in extragenic regions are the key elements involved. As all extragenic spaces are putative regulatory regions, ExtraTrain covers all extragenic regions of available genomes and regulatory proteins from bacteria and archaea included in the UniProt database. Description ExtraTrain provides integrated and easily manageable information for 679816 extragenic regions and for the genes delimiting each of them. In addition ExtraTrain supplies a tool to explore extragenic regions, named Palinsight, oriented to detect and search palindromic patterns. This interactive visual tool is totally integrated in the database, allowing the search for regulatory signals in user defined sets of extragenic regions. The 26046 regulatory proteins included in ExtraTrain belong to the families AraC/XylS, ArsR, AsnC, Cold shock domain, CRP-FNR, DeoR, GntR, IclR, LacI, LuxR, LysR, MarR, MerR, NtrC/Fis, OmpR and TetR. The database follows the InterPro criteria to define these families. The information about regulators includes manually curated sets of references specifically associated to regulator entries. In order to achieve a sustainable and maintainable knowledge database ExtraTrain is a platform open to the contribution of knowledge by the scientific community providing a system for the incorporation of textual knowledge. Conclusion ExtraTrain is a new database for exploring Extragenic regions and Transcriptional information in bacteria and archaea. ExtraTrain database is available at . PMID:16539733

  3. Biotechnology Education and the Internet. ERIC Digest.

    Science.gov (United States)

    Lee, Thomas

    The world of modern biotechnology is based on recent developments in molecular biology, especially those in genetic engineering. Since this is a relatively new and rapidly advancing field of study, there are few traditional sources of information and activities. This digest highlights biotechnology resources including those that can be found on…

  4. Systems architecture: a new model for sustainability and the built environment using nanotechnology, biotechnology, information technology, and cognitive science with living technology.

    Science.gov (United States)

    Armstrong, Rachel

    2010-01-01

    This report details a workshop held at the Bartlett School of Architecture, University College London, to initiate interdisciplinary collaborations for the practice of systems architecture, which is a new model for the generation of sustainable architecture that combines the discipline of the study of the built environment with the scientific study of complexity, or systems science, and adopts the perspective of systems theory. Systems architecture offers new perspectives on the organization of the built environment that enable architects to consider architecture as a series of interconnected networks with embedded links into natural systems. The public workshop brought together architects and scientists working with the convergence of nanotechnology, biotechnology, information technology, and cognitive science and with living technology to investigate the possibility of a new generation of smart materials that are implied by this approach.

  5. Shewregdb: database and visualization environment for experimental and predicted regulatory information in Shewanella oneidensis mr-1.

    Science.gov (United States)

    Syed, Mustafa H; Karpinets, Tatiana V; Leuze, Michael R; Kora, Guruprasad H; Romine, Margaret R; Uberbacher, Edward C

    2009-10-15

    Shewanella oneidensis MR-1 is an important model organism for environmental research as it has an exceptional metabolic and respiratory versatility regulated by a complex regulatory network. We have developed a database to collect experimental and computational data relating to regulation of gene and protein expression, and, a visualization environment that enables integration of these data types. The regulatory information in the database includes predictions of DNA regulator binding sites, sigma factor binding sites, transcription units, operons, promoters, and RNA regulators including non-coding RNAs, riboswitches, and different types of terminators. http://shewanella-knowledgebase.org:8080/Shewanella/gbrowserLanding.jsp.

  6. Establishment of Low Energy Building materials and Equipment Database Based on Property Information

    Science.gov (United States)

    Kim, Yumin; Shin, Hyery; eon Lee, Seung

    2018-03-01

    The purpose of this study is to provide reliable service of materials information portal through the establishment of public big data by collecting and integrating scattered low energy building materials and equipment data. There were few cases of low energy building materials database in Korea have provided material properties as factors influencing material pricing. The framework of the database was defined referred with Korea On-line E-procurement system. More than 45,000 data were gathered by the specification of entities and with the gathered data, price prediction models for chillers were suggested. To improve the usability of the prediction model, detailed properties should be analysed for each item.

  7. Biotechnology organizations in action

    DEFF Research Database (Denmark)

    Norus, Jesper

    This volume analyzes the dynamics and interactive processes among the players (individuals, institutions, and organizations/firms) that have constituted and legitimized the development of the biotechnology industries. The unit of analysis is small entrepreneurial firms developing biotechnological...

  8. Managing Database Services: An Approach Based in Information Technology Services Availabilty and Continuity Management

    Directory of Open Access Journals (Sweden)

    Leonardo Bastos Pontes

    2017-01-01

    Full Text Available This paper is held in the information technology services management environment, with a few ideas of information technology governance, and purposes to implement a hybrid model to manage the services of a database, based on the principles of information technology services management in a supplementary health operator. This approach utilizes fundamental nuances of services management guides, such as CMMI for Services, COBIT, ISO 20000, ITIL and MPS.BR for Services; it studies harmonically Availability and Continuity Management, as most part of the guides also do. This work has its importance because it keeps a good flow in the database and improves the agility of the systems in the accredited clinics in the health plan.

  9. Data integration and knowledge discovery in biomedical databases. Reliable information from unreliable sources

    Directory of Open Access Journals (Sweden)

    A Mitnitski

    2003-01-01

    Full Text Available To better understand information about human health from databases we analyzed three datasets collected for different purposes in Canada: a biomedical database of older adults, a large population survey across all adult ages, and vital statistics. Redundancy in the variables was established, and this led us to derive a generalized (macroscopic state variable, being a fitness/frailty index that reflects both individual and group health status. Evaluation of the relationship between fitness/frailty and the mortality rate revealed that the latter could be expressed in terms of variables generally available from any cross-sectional database. In practical terms, this means that the risk of mortality might readily be assessed from standard biomedical appraisals collected for other purposes.

  10. Design and Implementation of an Enterprise Information System Utilizing a Component Based Three-Tier Client/Server Database System

    National Research Council Canada - National Science Library

    Akbay, Murat

    1999-01-01

    The Naval Security Group currently requires a modem architecture to merge existing command databases into a single Enterprise Information System through which each command may manipulate administrative data...

  11. Systems biology and biotechnology of Streptomyces species for the production of secondary metabolites

    DEFF Research Database (Denmark)

    Hwang, Kyu-Sang; Kim, Hyun Uk; Charusanti, Pep

    2014-01-01

    have been more systematized with high-throughput techniques through inspections of correlations among components of the primary and secondary metabolisms at the genome scale. Moreover, up-to-date information on the genome of Streptomyces species with emphasis on their secondary metabolism has been...... collected in the form of databases and knowledgebases, providing predictive information and enabling one to explore experimentally unrecognized biological spaces of secondary metabolism. Herein, we review recent trends in the systems biology and biotechnology of Streptomyces species....

  12. Patenting Biotechnological Inventions in Europe

    Directory of Open Access Journals (Sweden)

    Peter Raspor

    2002-01-01

    Full Text Available The patent system has been able to provide the protection for the achievements of different technologies and in that way it has supported further development and growth of the industry where those achievements were implemented. Modern technologies like information technology and biotechnology with genetic engineering that appeared in the 70s have overgrown the frames of the existing patent system because of their exponential development during the last thirty years. Industry that invests a huge amount of money in these technologies, especially in the field of biotechnology, where the results are very uncertain, has started to claim changes in the patent system.

  13. Automated granularity to integrate digital information: the "Antarctic Treaty Searchable Database" case study

    Directory of Open Access Journals (Sweden)

    Paul Arthur Berkman

    2006-06-01

    Full Text Available Access to information is necessary, but not sufficient in our digital era. The challenge is to objectively integrate digital resources based on user-defined objectives for the purpose of discovering information relationships that facilitate interpretations and decision making. The Antarctic Treaty Searchable Database (http://aspire.nvi.net, which is in its sixth edition, provides an example of digital integration based on the automated generation of information granules that can be dynamically combined to reveal objective relationships within and between digital information resources. This case study further demonstrates that automated granularity and dynamic integration can be accomplished simply by utilizing the inherent structure of the digital information resources. Such information integration is relevant to library and archival programs that require long-term preservation of authentic digital resources.

  14. HNdb: an integrated database of gene and protein information on head and neck squamous cell carcinoma

    Science.gov (United States)

    Henrique, Tiago; José Freitas da Silveira, Nelson; Henrique Cunha Volpato, Arthur; Mioto, Mayra Mataruco; Carolina Buzzo Stefanini, Ana; Bachir Fares, Adil; Gustavo da Silva Castro Andrade, João; Masson, Carolina; Verónica Mendoza López, Rossana; Daumas Nunes, Fabio; Paulo Kowalski, Luis; Severino, Patricia; Tajara, Eloiza Helena

    2016-01-01

    The total amount of scientific literature has grown rapidly in recent years. Specifically, there are several million citations in the field of cancer. This makes it difficult, if not impossible, to manually retrieve relevant information on the mechanisms that govern tumor behavior or the neoplastic process. Furthermore, cancer is a complex disease or, more accurately, a set of diseases. The heterogeneity that permeates many tumors is particularly evident in head and neck (HN) cancer, one of the most common types of cancer worldwide. In this study, we present HNdb, a free database that aims to provide a unified and comprehensive resource of information on genes and proteins involved in HN squamous cell carcinoma, covering data on genomics, transcriptomics, proteomics, literature citations and also cross-references of external databases. Different literature searches of MEDLINE abstracts were performed using specific Medical Subject Headings (MeSH terms) for oral, oropharyngeal, hypopharyngeal and laryngeal squamous cell carcinomas. A curated gene-to-publication assignment yielded a total of 1370 genes related to HN cancer. The diversity of results allowed identifying novel and mostly unexplored gene associations, revealing, for example, that processes linked to response to steroid hormone stimulus are significantly enriched in genes related to HN carcinomas. Thus, our database expands the possibilities for gene networks investigation, providing potential hypothesis to be tested. Database URL: http://www.gencapo.famerp.br/hndb PMID:27013077

  15. Seminar on Nano-biotechnology

    Indian Academy of Sciences (India)

    Home; Journals; Resonance – Journal of Science Education; Volume 13; Issue 12. Seminar on Nano-biotechnology. Information and Announcements Volume 13 Issue 12 December 2008 pp 1191-1191. Fulltext. Click here to view fulltext PDF. Permanent link: http://www.ias.ac.in/article/fulltext/reso/013/12/1191-1191 ...

  16. Shewregdb: Database and visualization environment for experimental and predicted regulatory information in Shewanella oneidensis mr-1

    Energy Technology Data Exchange (ETDEWEB)

    Syed, Mustafa; Karpinets, Tatiana V.; Leuze, Mike; Kora, Guruprasad; Romine, Margaret F.; Uberbacher, Edward

    2009-10-15

    Shewanella oneidensis MR-1 is an important model organism for environmental research as it has an exceptional metabolic and respiratory versatility regulated by a complex regulatory network. We have developed a database to collect experimental and computational data relating to regulation of gene and protein expression and a visualization environment that enables integration of these data types. The regulatory information in the database was collected from the published literature and different Internet resources. It includes predictions of DNA regulator binding sites, sigma factor binding sites, transcription units, operons, promoters, and RNA regulators including non-coding RNAs, riboswitches, and different types of terminators. A visualization environment based on GBrowser was developed for accessing the collected information and for its overlaying with experimental data (experimental results from studies employing microarrays, proteomics, and/or gene mutagenesis) and other genome annotations.

  17. [Public scientific knowledge distribution in health information, communication and information technology indexed in MEDLINE and LILACS databases].

    Science.gov (United States)

    Packer, Abel Laerte; Tardelli, Adalberto Otranto; Castro, Regina Célia Figueiredo

    2007-01-01

    This study explores the distribution of international, regional and national scientific output in health information and communication, indexed in the MEDLINE and LILACS databases, between 1996 and 2005. A selection of articles was based on the hierarchical structure of Information Science in MeSH vocabulary. Four specific domains were determined: health information, medical informatics, scientific communications on healthcare and healthcare communications. The variables analyzed were: most-covered subjects and journals, author affiliation and publication countries and languages, in both databases. The Information Science category is represented in nearly 5% of MEDLINE and LILACS articles. The four domains under analysis showed a relative annual increase in MEDLINE. The Medical Informatics domain showed the highest number of records in MEDLINE, representing about half of all indexed articles. The importance of Information Science as a whole is more visible in publications from developed countries and the findings indicate the predominance of the United States, with significant growth in scientific output from China and South Korea and, to a lesser extent, Brazil.

  18. Information flow in the DAMA Project beyond database managers: Information flow managers

    Energy Technology Data Exchange (ETDEWEB)

    Russell, L. [Argonne National Lab., IL (United States); Wolfson, O.; Yu, C. [Illinois Univ., Chicago, IL (United States)

    1996-03-01

    To meet the demands of commercial data traffic on the information highway, a new look at managing data is necessary. One projected activity, sharing of point-of-sale information, is being considered in the Demand Activated Manufacturing Project of the American Textile Partnership project. A scenario is examined in which 100,000 retail outlets communicate over a period of days. They provide the latest estimate of demand for sewn products across a chain of 26,000 suppliers through the use of bill-of-materials explosions at four levels of detail. A new paradign the information flow manager, is developed to handle this situation, including the case where members of the supply chain fail to communicate and go out of business. Techniques for approximation are introduced to keep estimates of demand as current as possible.

  19. A New Interface for the Magnetics Information Consortium (MagIC) Paleo and Rock Magnetic Database

    Science.gov (United States)

    Jarboe, N.; Minnett, R.; Koppers, A. A. P.; Tauxe, L.; Constable, C.; Shaar, R.; Jonestrask, L.

    2014-12-01

    The Magnetic Information Consortium (MagIC) database (http://earthref.org/MagIC/) continues to improve the ease of uploading data, the creation of complex searches, data visualization, and data downloads for the paleomagnetic, geomagnetic, and rock magnetic communities. Data uploading has been simplified and no longer requires the use of the Excel SmartBook interface. Instead, properly formatted MagIC text files can be dragged-and-dropped onto an HTML 5 web interface. Data can be uploaded one table at a time to facilitate ease of uploading and data error checking is done online on the whole dataset at once instead of incrementally in an Excel Console. Searching the database has improved with the addition of more sophisticated search parameters and with the ability to use them in complex combinations. Searches may also be saved as permanent URLs for easy reference or for use as a citation in a publication. Data visualization plots (ARAI, equal area, demagnetization, Zijderveld, etc.) are presented with the data when appropriate to aid the user in understanding the dataset. Data from the MagIC database may be downloaded from individual contributions or from online searches for offline use and analysis in the tab delimited MagIC text file format. With input from the paleomagnetic, geomagnetic, and rock magnetic communities, the MagIC database will continue to improve as a data warehouse and resource.

  20. 77 FR 47690 - 30-Day Notice of Proposed Information Collection: Civilian Response Corps Database In-Processing...

    Science.gov (United States)

    2012-08-09

    .... Title of Information Collection: Civilian Response Corps Database In-Processing Electronic Form. OMB... DEPARTMENT OF STATE [Public Notice 7976] 30-Day Notice of Proposed Information Collection: Civilian Response Corps Database In-Processing Electronic Form, OMB Control Number 1405-0168, Form DS-4096...

  1. A Spatio-Temporal Building Exposure Database and Information Life-Cycle Management Solution

    Directory of Open Access Journals (Sweden)

    Marc Wieland

    2017-04-01

    Full Text Available With an ever-increasing volume and complexity of data collected from a variety of sources, the efficient management of geospatial information becomes a key topic in disaster risk management. For example, the representation of assets exposed to natural disasters is subjected to changes throughout the different phases of risk management reaching from pre-disaster mitigation to the response after an event and the long-term recovery of affected assets. Spatio-temporal changes need to be integrated into a sound conceptual and technological framework able to deal with data coming from different sources, at varying scales, and changing in space and time. Especially managing the information life-cycle, the integration of heterogeneous information and the distributed versioning and release of geospatial information are important topics that need to become essential parts of modern exposure modelling solutions. The main purpose of this study is to provide a conceptual and technological framework to tackle the requirements implied by disaster risk management for describing exposed assets in space and time. An information life-cycle management solution is proposed, based on a relational spatio-temporal database model coupled with Git and GeoGig repositories for distributed versioning. Two application scenarios focusing on the modelling of residential building stocks are presented to show the capabilities of the implemented solution. A prototype database model is shared on GitHub along with the necessary scenario data.

  2. Termites as targets and models for biotechnology.

    Science.gov (United States)

    Scharf, Michael E

    2015-01-07

    Termites have many unique evolutionary adaptations associated with their eusocial lifestyles. Recent omics research has created a wealth of new information in numerous areas of termite biology (e.g., caste polyphenism, lignocellulose digestion, and microbial symbiosis) with wide-ranging applications in diverse biotechnological niches. Termite biotechnology falls into two categories: (a) termite-targeted biotechnology for pest management purposes, and (b) termite-modeled biotechnology for use in various industrial applications. The first category includes several candidate termiticidal modes of action such as RNA interference, digestive inhibition, pathogen enhancement, antimicrobials, endocrine disruption, and primer pheromone mimicry. In the second category, termite digestomes are deep resources for host and symbiont lignocellulases and other enzymes with applications in a variety of biomass, industrial, and processing applications. Moving forward, one of the most important approaches for accelerating advances in both termite-targeted and termite-modeled biotechnology will be to consider host and symbiont together as a single functional unit.

  3. Information Management in Creative Engineering Design and Capabilities of Database Transactions

    DEFF Research Database (Denmark)

    Jacobsen, Kim; Eastman, C. A.; Jeng, T. S.

    1997-01-01

    This paper examines the information management requirements and sets forth the general criteria for collaboration and concurrency control in creative engineering design. Our work attempts to recognize the full range of concurrency, collaboration and complex transactions structure now practiced...... in manual and semi-automated design and the range of capabilities needed as the demands for enhanced but flexible electronic information management unfolds.The objective of this paper is to identify new issues that may advance the use of databases to support creative engineering design. We start...... with a generalized description of the structure of design tasks and how information management in design is dealt with today. After this review, we identify extensions to current information management capabilities that have been realized and/or proposed to support/augment what designers can do now. Given...

  4. The utility of imputed matched sets. Analyzing probabilistically linked databases in a low information setting.

    Science.gov (United States)

    Thomas, A M; Cook, L J; Dean, J M; Olson, L M

    2014-01-01

    To compare results from high probability matched sets versus imputed matched sets across differing levels of linkage information. A series of linkages with varying amounts of available information were performed on two simulated datasets derived from multiyear motor vehicle crash (MVC) and hospital databases, where true matches were known. Distributions of high probability and imputed matched sets were compared against the true match population for occupant age, MVC county, and MVC hour. Regression models were fit to simulated log hospital charges and hospitalization status. High probability and imputed matched sets were not significantly different from occupant age, MVC county, and MVC hour in high information settings (p > 0.999). In low information settings, high probability matched sets were significantly different from occupant age and MVC county (p sets were not (p > 0.493). High information settings saw no significant differences in inference of simulated log hospital charges and hospitalization status between the two methods. High probability and imputed matched sets were significantly different from the outcomes in low information settings; however, imputed matched sets were more robust. The level of information available to a linkage is an important consideration. High probability matched sets are suitable for high to moderate information settings and for situations involving case-specific analysis. Conversely, imputed matched sets are preferable for low information settings when conducting population-based analyses.

  5. Evolution of grid-wide access to database resident information in ATLAS using Frontier

    CERN Document Server

    Barberis, D; The ATLAS collaboration; de Stefano, J; Dewhurst, A L; Dykstra, D; Front, D

    2012-01-01

    The ATLAS experiment deployed Frontier technology world-wide during the the initial year of LHC collision data taking to enable user analysis jobs running on the World-wide LHC Computing Grid to access database resident data. Since that time, the deployment model has evolved to optimize resources, improve performance, and streamline maintenance of Frontier and related infrastructure. In this presentation we focus on the specific changes in the deployment and improvements undertaken such as the optimization of cache and launchpad location, the use of RPMs for more uniform deployment of underlying Frontier related components, improvements in monitoring, optimization of fail-over, and an increasing use of a centrally managed database containing site specific information (for configuration of services and monitoring). In addition, analysis of Frontier logs has allowed us a deeper understanding of problematic queries and understanding of use cases. Use of the system has grown beyond just user analysis and subsyste...

  6. ProRule: a new database containing functional and structural information on PROSITE profiles.

    Science.gov (United States)

    Sigrist, Christian J A; De Castro, Edouard; Langendijk-Genevaux, Petra S; Le Saux, Virginie; Bairoch, Amos; Hulo, Nicolas

    2005-11-01

    Increase the discriminatory power of PROSITE profiles to facilitate function determination and provide biologically relevant information about domains detected by profiles for the annotation of proteins. We have created a new database, ProRule, which contains additional information about PROSITE profiles. ProRule contains notably the position of structurally and/or functionally critical amino acids, as well as the condition they must fulfill to play their biological role. These supplementary data should help function determination and annotation of the UniProt Swiss-Prot knowledgebase. ProRule also contains information about the domain detected by the profile in the Swiss-Prot line format. Hence, ProRule can be used to make Swiss-Prot annotation more homogeneous and consistent. The format of ProRule can be extended to provide information about combination of domains. ProRule can be accessed through ScanProsite at http://www.expasy.org/tools/scanprosite. A file containing the rules will be made available under the PROSITE copyright conditions on our ftp site (ftp://www.expasy.org/databases/prosite/) by the next PROSITE release.

  7. De-duplication on the Backup System with Information Storage in a Database

    Directory of Open Access Journals (Sweden)

    Sergey M. Taranin

    2017-01-01

    Full Text Available Prevention of data loss from digital media includes such a process as a backup. It can be done manually by copying data to external media or automated on a schedule by using special software. There are the remote backup systems, when data are saved over the network to the remote repository. Such systems are multi-user and they process large amounts of data. Shared storage can meet files containing the same fragments. The elimination of repeated data is based on the mechanism of de-duplication. It is a method of information compression, when the search of copies is performed in the entire dataset rather than within a single file. The main advantage of using this technology is a significant saving of disk space. However, the mechanism of eliminating repetitive data can significantly reduce the speed of saving and restoring information. This article is devoted to the problem of implementing such a mechanism in the backup system with information storage in a relational database. In this paper we consider an example of implementation of such a system working in two modes: with the de-duplication of data and without it. The article illustrates a class diagram for the development of a client part of application as well as the description of tables and relationships between them in a database that belongs to the backend. The author offers an algorithm of saving data wiht de-duplication, and also gives the results of comparative tests on the speed of the algorithms of saving and restoring information when working with relational database management systems from different manufacturers.

  8. The Information Seeking Interface with Spatial Icons for the Children Digital-learning Database

    Directory of Open Access Journals (Sweden)

    吳可久、林佳蓉、陳泓均、柯皓仁 Ko-Chiu Wu,Chia-Jung Lin,Hung-Chun Chen,Hao-Ren Ke

    2014-04-01

    Full Text Available In this age of information technology, children must develop the ability to search digital databases.However, the information-seeking behavior and cognitive abilities associated with language and images differ substantially between children and adults. Therefore there is an urgent need foran information-searching interface customized for children. Drawing on the design of computer games, we created a three-dimensional (3D human-computer interface (HCI. Children’s experience playing computer games can therefore inform way-finding and information-seeking behavior inthis spatially-oriented interface. Three types of HCI were developed: a 2D graphic hyperlink (GH,a 3D extended survey (ES, and a 3D extended route (ER. These were tested for efficiency, effectiveness, and time of operation by one-way analysis of variance. Our results indicated that children behave differently on the various interfaces. The proposed HCI is a helpful tool offering children a knowledge map that enables them to search for the information they need. Our results demonstrate that information visualization theory and concept association are topics worthy offurther study in the development of a child-oriented information-seeking interface. pp. 51-65

  9. Biotechnological advances in Lilium.

    Science.gov (United States)

    Bakhshaie, Mehdi; Khosravi, Solmaz; Azadi, Pejman; Bagheri, Hedayat; van Tuyl, Jaap M

    2016-09-01

    Modern powerful techniques in plant biotechnology have been developed in lilies (Lilium spp., Liliaceae) to propagate, improve and make new phenotypes. Reliable in vitro culture methods are available to multiply lilies rapidly and shorten breeding programs. Lilium is also an ideal model plant to study in vitro pollination and embryo rescue methods. Although lilies are recalcitrant to genetic manipulation, superior genotypes are developed with improved flower colour and form, disease resistance and year round forcing ability. Different DNA molecular markers have been developed for rapid indirect selection, genetic diversity evaluation, mutation detection and construction of Lilium linkage map. Some disease resistance-QTLs are already mapped on the Lilium linkage map. This review presents latest information on in vitro propagation, genetic engineering and molecular advances made in lily.

  10. 2001 Industry Studies: Biotechnology

    National Research Council Canada - National Science Library

    2001-01-01

    .... The applications of biotechnology, such as medicine, agribusiness, forensics, informatics and the defense sector, offer many benefits, but also bring some risk, requiring public policy decisions...

  11. Incident and Trafficking Database: New Systems for Reporting and Accessing State Information

    International Nuclear Information System (INIS)

    Dimitrovski, D.; Kittley, S.

    2015-01-01

    The IAEA's Incident and Trafficking Database (ITDB) is the Agency's authoritative source for information on incidents in which nuclear and other radioactive material is out of national regulatory control. It was established in 1995 and, as of June 2014, 126 States participate in the ITDB programme. Currently, the database contains over 2500 confirmed incidents, out of which 21% involve nuclear material, 62% radioactive source and 17% radioactively contaminated material. In recent years, the system for States to report incidents to the ITDB has been evolving — moving from fax-based to secure email and most recently to secure on-line reporting. A Beta version of the on-line system was rolled out this June, offering a simple, yet secure, communication channel for member states to provide information. In addition the system serves as a central hub for information related to official communication of the IAEA with Member States so some communication that is traditionally shared by e-mail does not get lost when ITDB counterparts change. In addition the new reporting system incorporates optional features that allow multiple Member State users to collaboratively contribute toward an INF. States are also being given secure on-line access to a streamlined version of the ITDB. This improves States' capabilities to retrieve and analyze information for their own purposes. In addition, on-line access to ITDB statistical information on incidents is available to States through an ITDB Dashboard. The dashboard contains aggregate information on number and types of incidents, material involved, as well some other statistics related to the ITDB that is typically provided in the ITDB Quarterly reports. (author)

  12. Homeland situation awareness through mining and fusing heterogeneous information from intelligence databases and field sensors

    Science.gov (United States)

    Digioia, Giusj; Panzieri, Stefano

    2012-06-01

    One of the most felt issues in the defence domain is that of having huge quantities of data stored in databases and acquired from field sensors, without being able to infer information from them. Usually databases are continuously updated with observations, and are related to heterogeneous data. Deep and continuous analysis on data could mine useful correlations, explain relations existing among data and cue searches for further evidences. The solution to the problem addressed before seems to deal both with the domain of Data Mining and with the domain of high level Data Fusion, that is Situation Assessment, Threat Assessment and Process Refinement, also synthesised as Situation Awareness. The focus of this paper is the definition of an architecture for a system adopting data mining techniques to adaptively discover clusters of information and relation among them, to classify observations acquired and to use the model of knowledge and the classification derived in order to assess situations, threats and refine the search for evidences. Sources of information taken into account are those related to the intelligence domain, as IMINT, HUMINT, ELINT, COMINT and other non-conventional sources. The algorithms applied refer to not supervised and supervised classification for rule exploitation, and adaptively built Hidden Markov Model for situation and threat assessment.

  13. Intelligent information database of the thermal-hydraulic characteristics for a future marine water reactor

    International Nuclear Information System (INIS)

    Inasaka, Fujio; Nariai, Hideki

    2000-01-01

    At the Ship Research Institute, a series of the experimental studies on the thermal-hydraulic characteristics of an integrated type marine water reactor has been conducted. This current study aims at developing an intelligent information database program with the thermal-hydraulic characteristics of a future marine water reactor on the basis of the valuably experimental knowledge, which was obtained from the above-mentioned studies. In this paper, the experimental knowledge with the flow boiling of a once-through steam generator and the natural circulation of primary water under a ship rolling motion was converted into an intelligent information database program. The program was created as a Windows application using the Visual Basic. Main functions of the program are as follows: (1) steady state flow boiling analysis and determination of stability for any helical-coil type once-through steam generator design, (2) reference and graphic display of the experimental data, (3) reference of the information such as analysis method and experimental apparatus. The program will be useful for the design of not only the future integrated type marine water reactor but also the small sized reactor with helical-coil type steam generator. (author)

  14. Interdisciplinary Collaboration amongst Colleagues and between Initiatives with the Magnetics Information Consortium (MagIC) Database

    Science.gov (United States)

    Minnett, R.; Koppers, A. A. P.; Jarboe, N.; Tauxe, L.; Constable, C.; Jonestrask, L.; Shaar, R.

    2014-12-01

    Earth science grand challenges often require interdisciplinary and geographically distributed scientific collaboration to make significant progress. However, this organic collaboration between researchers, educators, and students only flourishes with the reduction or elimination of technological barriers. The Magnetics Information Consortium (http://earthref.org/MagIC/) is a grass-roots cyberinfrastructure effort envisioned by the geo-, paleo-, and rock magnetic scientific community to archive their wealth of peer-reviewed raw data and interpretations from studies on natural and synthetic samples. MagIC is dedicated to facilitating scientific progress towards several highly multidisciplinary grand challenges and the MagIC Database team is currently beta testing a new MagIC Search Interface and API designed to be flexible enough for the incorporation of large heterogeneous datasets and for horizontal scalability to tens of millions of records and hundreds of requests per second. In an effort to reduce the barriers to effective collaboration, the search interface includes a simplified data model and upload procedure, support for online editing of datasets amongst team members, commenting by reviewers and colleagues, and automated contribution workflows and data retrieval through the API. This web application has been designed to generalize to other databases in MagIC's umbrella website (EarthRef.org) so the Geochemical Earth Reference Model (http://earthref.org/GERM/) portal, Seamount Biogeosciences Network (http://earthref.org/SBN/), EarthRef Digital Archive (http://earthref.org/ERDA/) and EarthRef Reference Database (http://earthref.org/ERR/) will benefit from its development.

  15. YAC contig information - RGP physicalmap | LSDB Archive [Life Science Database Archive metadata

    Lifescience Database Archive (English)

    Full Text Available 8908/lsdba.nbdc00318-06-001 Description of data contents YAC contigs on the rice chromosomes Data file File name: rgp_physical...map_yac_contigs.zip File URL: ftp://ftp.biosciencedbc.jp/archive/rgp-physicalmap/LATEST/rgp_physical...sciencedbc.jp/togodb/view/rgp_physicalmap_yac_contigs#en Data acquisition method The range including YAC con...m Description Chrom. No. Chromosome number Region Region number Physical map image The file name of rice physical...n Download License Update History of This Database Site Policy | Contact Us YAC contig information - RGP physicalmap | LSDB Archive ...

  16. Enhancing Content-And-Structure Information Retrieval using a Native XML Database

    OpenAIRE

    Pehcevski, Jovan; Thom, James A.; Vercoustre, Anne-Marie

    2005-01-01

    http://www.cs.utwente.nl/~tdm/Proceedings/TDMProc.pdf; Three approaches to content-and-structure XML retrieval are analysed in this paper: first by using Zettair, a full-text information retrieval system; second by using eXist, a native XML database, and third by using a hybrid XML retrieval system that uses eXist to produce the final answers from likely relevant articles retrieved by Zettair. INEX 2003 content-and-structure topics can be classified in two categories: the first retrieving ful...

  17. Hybrid XML Retrieval: Combining Information Retrieval and a Native XML Database

    OpenAIRE

    Pehcevski, Jovan; Thom, James A.; Vercoustre, Anne-Marie

    2005-01-01

    Postprint version. The editor version can be accessed through the DOI./http://www.springeronline.com/; This paper investigates the impact of three approaches to XML retrieval: using Zettair, a full-text information retrieval system; using eXist, a native XML database; and using a hybrid system that takes full article answers from Zettair and uses eXist to extract elements from those articles. For the content-only topics, we undertake a preliminary analysis of the INEX 2003 relevance assessmen...

  18. Re-Framing Biotechnology Regulation.

    Science.gov (United States)

    Peck, Alison

    Biotechnology is about to spill the banks of federal regulation. New genetic engineering techniques like CRISPR-Cas9 promise revolutionary breakthroughs in medicine, agriculture, and public health—but those techniques would not be regulated under the terms of the Coordinated Framework for Regulation of Biotechnology. This revolutionary moment in biotechnology offers an opportunity to correct the flaws in the framework, which was hastily patched together at the advent of the technology. The framework has never captured all relevant technologies, has never satisfied the public that risk is being effectively managed, and has never been accessible to small companies and publicly-funded labs that increasingly are positioned to make radical, life-saving innovations. This Article offers a proposal for new legislation that would reshape biotechnology regulation to better meet these goals. Key reforms include tying regulation to risk rather than technology category; consolidating agency review; capturing distinct regulatory expertise through inter-agency consultations; creating a clearinghouse to help guide applicants and disseminate information; setting up more comprehensive monitoring of environmental effects; and providing federal leadership to fill key data gaps and address socio-economic impacts.

  19. Biotechnology essay competition: biotechnology and sustainable food practices.

    Science.gov (United States)

    Peng, Judy; Schoeb, Helena; Lee, Gina

    2013-06-01

    Biotechnology Journal announces our second biotechnology essay competition with the theme "biotechnology and sustainable food practices", open to all undergraduate students. Copyright © 2013 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

  20. National Levee Database, series information for the current inventory of the Nation's levees.

    Data.gov (United States)

    Federal Geographic Data Committee — The National Levee Database is authoritative database that describes the location and condition of the Nation’s levees. The database contains 21 feature classes...

  1. A database paradigm for the management of DICOM-RT structure sets using a geographic information system

    Science.gov (United States)

    Shao, Weber; Kupelian, Patrick A.; Wang, Jason; Low, Daniel A.; Ruan, Dan

    2014-03-01

    We devise a paradigm for representing the DICOM-RT structure sets in a database management system, in such way that secondary calculations of geometric information can be performed quickly from the existing contour definitions. The implementation of this paradigm is achieved using the PostgreSQL database system and the PostGIS extension, a geographic information system commonly used for encoding geographical map data. The proposed paradigm eliminates the overhead of retrieving large data records from the database, as well as the need to implement various numerical and data parsing routines, when additional information related to the geometry of the anatomy is desired.

  2. A database paradigm for the management of DICOM-RT structure sets using a geographic information system

    International Nuclear Information System (INIS)

    Shao, Weber; Kupelian, Patrick A; Wang, Jason; Low, Daniel A; Ruan, Dan

    2014-01-01

    We devise a paradigm for representing the DICOM-RT structure sets in a database management system, in such way that secondary calculations of geometric information can be performed quickly from the existing contour definitions. The implementation of this paradigm is achieved using the PostgreSQL database system and the PostGIS extension, a geographic information system commonly used for encoding geographical map data. The proposed paradigm eliminates the overhead of retrieving large data records from the database, as well as the need to implement various numerical and data parsing routines, when additional information related to the geometry of the anatomy is desired.

  3. Frontiers in biomedical engineering and biotechnology.

    Science.gov (United States)

    Liu, Feng; Goodarzi, Ali; Wang, Haifeng; Stasiak, Joanna; Sun, Jianbo; Zhou, Yu

    2014-01-01

    The 2nd International Conference on Biomedical Engineering and Biotechnology (iCBEB 2013), held in Wuhan on 11–13 October 2013, is an annual conference that aims at providing an opportunity for international and national researchers and practitioners to present the most recent advances and future challenges in the fields of Biomedical Information, Biomedical Engineering and Biotechnology. The papers published by this issue are selected from this conference, which witnesses the frontier in the field of Biomedical Engineering and Biotechnology, which particularly has helped improving the level of clinical diagnosis in medical work.

  4. Dynamic Externalities, Universities and Social Capital Formation in the EU Biotechnology Industry

    Directory of Open Access Journals (Sweden)

    Malgorzata RUNIEWICZ-WARDYN

    2017-03-01

    Full Text Available The paper investigates the role of dynamic externalities, university-industry linkages and role of social networking in the biotechnology industry in the European Union (EU. Universities act as platforms for local knowledge spillovers and university-industry cluster development in the biotechnology field. The R&D activities at universities contribute to successful business innovations. However, the relationship between the universities and the local innovation capabilities is much more complex and therefore requires more in-depth analysis. The following study derives from the knowledge of the new economic geography, endogenous growth theory, biotechnology, as well as theories of social capital and social networks. The quantitative research elaborates contemporary literature and databases to find channels of interdependence between local university-based knowledge flows, social capital, and biotechnology cluster performance. The results of the study show that the biotechnology industry relies very much on university-business R&D partnerships and research mobility (e.g. pharmaceutical firms that performed basic research in close cooperation with academia produced more patents. In addition, social networking and informal contacts seem to be a more important for the diffusion of knowledge, especially at the beginning of R&D process, as they allow for building credibility between potential partners.

  5. Searching for evidence or approval? A commentary on database search in systematic reviews and alternative information retrieval methodologies

    NARCIS (Netherlands)

    Delaney, Aogán; Tamás, Peter A.

    2017-01-01

    Despite recognition that database search alone is inadequate even within the health sciences, it appears that reviewers in fields that have adopted systematic review are choosing to rely primarily, or only, on database search for information retrieval. This commentary reminds readers of factors that

  6. MD-portal Materials Database: Effective Materials Property Information Management in Nuclear Energy Systems

    Energy Technology Data Exchange (ETDEWEB)

    Lee, Gyeonggeun; Kil, Soyeon; Kwon, Junhyun [Korea Atomic Energy Research Institute, Daejeon (Korea, Republic of)

    2014-05-15

    The collective properties of the nuclear materials are defined as standard industrial codes such as ASME codes. While in service, the materials are aged and degraded, and the initial properties are changed according to the operating environments. These changes are a matter of substantial concern of the operators, regulators, and researchers in nuclear fields. Hence, the material property database considering the degradation is required, and the successful management and use of material property information must be responsive to the continuing changes and increasing complexity in nuclear engineering materials. Recently, the nuclear materials division in the Korea Atomic Energy Research Institute (KAERI) launched a comprehensive portal website for nuclear material information, which is known as the MD-portal. The MD-portal contains various technical documents on the degradation and development of nuclear materials. Additionally, the nuclear materials database (MatDB) is incorporated in it. The MatDB covers the mechanical properties of various nuclear structural materials used as the components: a reactor pressure vessel, steam generator, and primary and secondary piping. In this study, we introduced the MD-portal MatDB briefly, and showed an application of the MatDB to the real case of material degradations in NPPs.

  7. The Net Enabled Waste Management Database as an international source of radioactive waste management information

    International Nuclear Information System (INIS)

    Csullog, G.W.; Friedrich, V.; Miaw, S.T.W.; Tonkay, D.; Petoe, A.

    2002-01-01

    The IAEA's Net Enabled Waste Management Database (NEWMDB) is an integral part of the IAEA's policies and strategy related to the collection and dissemination of information, both internal to the IAEA in support of its activities and external to the IAEA (publicly available). The paper highlights the NEWMDB's role in relation to the routine reporting of status and trends in radioactive waste management, in assessing the development and implementation of national systems for radioactive waste management, in support of a newly developed indicator of sustainable development for radioactive waste management, in support of reporting requirements for the Joint Convention on the Safety of Spent Fuel Management and on the Safety of Radioactive Waste Management, in support of IAEA activities related to the harmonization of waste management information at the national and international levels and in relation to the management of spent/disused sealed radioactive sources. (author)

  8. Nigerian Journal of Biotechnology

    African Journals Online (AJOL)

    Nigerian Journal of Biotechnology is a publisher of multidisciplinary peer-reviews original research works and critical reviews on interdisciplinary studies in Biotechnology, Agriculture, Food and Environment interface; and is published twice a year. It serves scientists in the field of Agriculture, Food science and Technology; ...

  9. Biotechnology in China

    National Research Council Canada - National Science Library

    Hamer, Dean H; Kung, Shain-dow

    1989-01-01

    ... and Shain-dow Kung Center for Agricultural Biotechnology Maryland Biotechnology Institute Department of Botany University of Maryland College Park, Maryland Committee on Scholarly Communication with the People's Republic of China National Academy of Sciences National Academy Press Washington, DC 1989 i Copyrightthe cannot be not from bo...

  10. National Carbon Sequestration Database and Geographic Information System (NatCarb)

    Energy Technology Data Exchange (ETDEWEB)

    Kenneth Nelson; Timothy Carr

    2009-03-31

    This annual and final report describes the results of the multi-year project entitled 'NATional CARBon Sequestration Database and Geographic Information System (NatCarb)' (http://www.natcarb.org). The original project assembled a consortium of five states (Indiana, Illinois, Kansas, Kentucky and Ohio) in the midcontinent of the United States (MIDCARB) to construct an online distributed Relational Database Management System (RDBMS) and Geographic Information System (GIS) covering aspects of carbon dioxide (CO{sub 2}) geologic sequestration. The NatCarb system built on the technology developed in the initial MIDCARB effort. The NatCarb project linked the GIS information of the Regional Carbon Sequestration Partnerships (RCSPs) into a coordinated regional database system consisting of datasets useful to industry, regulators and the public. The project includes access to national databases and GIS layers maintained by the NatCarb group (e.g., brine geochemistry) and publicly accessible servers (e.g., USGS, and Geography Network) into a single system where data are maintained and enhanced at the local level, but are accessed and assembled through a single Web portal to facilitate query, assembly, analysis and display. This project improves the flow of data across servers and increases the amount and quality of available digital data. The purpose of NatCarb is to provide a national view of the carbon capture and storage potential in the U.S. and Canada. The digital spatial database allows users to estimate the amount of CO{sub 2} emitted by sources (such as power plants, refineries and other fossil-fuel-consuming industries) in relation to geologic formations that can provide safe, secure storage sites over long periods of time. The NatCarb project worked to provide all stakeholders with improved online tools for the display and analysis of CO{sub 2} carbon capture and storage data through a single website portal (http://www.natcarb.org/). While the external

  11. Proteomics: a biotechnology tool for crop improvement

    OpenAIRE

    Eldakak, Moustafa; Milad, Sanaa I. M.; Nawar, Ali I.; Rohila, Jai S.

    2013-01-01

    A sharp decline in the availability of arable land and sufficient supply of irrigation water along with a continuous steep increase in food demands have exerted a pressure on farmers to produce more with fewer resources. A viable solution to release this pressure is to speed up the plant breeding process by employing biotechnology in breeding programs. The majority of biotechnological applications rely on information generated from various -omic technologies. The latest outstanding improve...

  12. Applying the archetype approach to the database of a biobank information management system.

    Science.gov (United States)

    Späth, Melanie Bettina; Grimson, Jane

    2011-03-01

    The purpose of this study is to investigate the feasibility of applying the openEHR archetype approach to modelling the data in the database of an existing proprietary biobank information management system. A biobank information management system stores the clinical/phenotypic data of the sample donor and sample related information. The clinical/phenotypic data is potentially sourced from the donor's electronic health record (EHR). The study evaluates the reuse of openEHR archetypes that have been developed for the creation of an interoperable EHR in the context of biobanking, and proposes a new set of archetypes specifically for biobanks. The ultimate goal of the research is the development of an interoperable electronic biomedical research record (eBMRR) to support biomedical knowledge discovery. The database of the prostate cancer biobank of the Irish Prostate Cancer Research Consortium (PCRC), which supports the identification of novel biomarkers for prostate cancer, was taken as the basis for the modelling effort. First the database schema of the biobank was analyzed and reorganized into archetype-friendly concepts. Then, archetype repositories were searched for matching archetypes. Some existing archetypes were reused without change, some were modified or specialized, and new archetypes were developed where needed. The fields of the biobank database schema were then mapped to the elements in the archetypes. Finally, the archetypes were arranged into templates specifically to meet the requirements of the PCRC biobank. A set of 47 archetypes was found to cover all the concepts used in the biobank. Of these, 29 (62%) were reused without change, 6 were modified and/or extended, 1 was specialized, and 11 were newly defined. These archetypes were arranged into 8 templates specifically required for this biobank. A number of issues were encountered in this research. Some arose from the immaturity of the archetype approach, such as immature modelling support tools

  13. Modern Biotechnology in China

    Science.gov (United States)

    Wang, Qing-Zhao; Zhao, Xue-Ming

    In recent years, with the booming economy, the Chinese government has increased its financial input to biotechnology research, which has led to remarkable achievements by China in modern biotechnology. As one of the key parts of modern biotechnology, industrial biotechnology will be crucial for China's sustainable development in this century. This review presents an overview of Chinese industrial biotechnology in last 10 years. Modern biotechnology had been classified into metabolic engineering and systems biology framework. Metabolic engineering is a field of broad fundamental and practical concept so we integrated the related technology achievements into the real practices of many metabolic engineering cases, such as biobased products production, environmental control and others. Now metabolic engineering is developing towards the systems level. Chinese researchers have also embraced this concept and have contributed invaluable things in genomics, transcriptomics, proteomics and related bioinformatics. A series of advanced laboratories or centers were established which will represent Chinese modern biotechnology development in the near future. At the end of this review, metabolic network research advances have also been mentioned.

  14. Interface of nuclear and biotechnologies

    International Nuclear Information System (INIS)

    Castro Diaz-Balart, F.

    2005-01-01

    Addressing nuclear and biotechnologies in the International Year of Physics should begin by highlighting the important role that this science has played in the development of both branches of science and technologies. The first as a direct consequence of the Theory of Relativity, the further was considerably influenced by Schroedinger's remarks that there must be a code of some kind that allowed molecules in cells to carry information, making a connection between genes and proteins. Both, like any highly technical endeavor, have also in common that the use of technologies demands a vast accumulation of knowledge, i.e. volumes of scientific research, engineering analysis, strict regulatory controls and a huge amount of information combined with a complex assortment of people with the required educational background, expertise and skills to master it. This presentation briefly explores the ways in which nuclear technology has been used in the last decades of the 20th century in the field of biomedicine applications, which includes the use of radiation to obtain accurate images as well as in diagnosis and therapy. The paper looks at the present prospects of some nuclear methods and instrumentation in the so-called Red biotechnology and its genetically engineered therapeutic agents and diagnostic tests as well as some related perspectives in the field of bioinformatics. As an example of biotechnology being successfully applied to health problems in developing countries the presentation gives an outlook of relevant Cuban achievements in this field. (author)

  15. TOXINZ, the New Zealand Internet poisons information database: The first decade.

    Science.gov (United States)

    Fountain, John S; Slaughter, Robin J

    2016-06-01

    The New Zealand National Poisons Centre has, over a number of years, developed an electronic poisons information database. In 2002, this was released as toxinz™ (University of Otago, Dunedin, New Zealand), an Internet accessible version. The objective of this study is to describe New Zealand subscriber utilisation of TOXINZ with an emphasis on pharmaceutical monographs viewed. A retrospective review was conducted of records of New Zealand subscriber access to TOXINZ monographs during the period 1 January 2003 to 31 December 2012. Telephone enquiry data to the New Zealand National Poisons Centre was also obtained for the same time period. Over the decade, 201 255 TOXINZ monographs were accessed, with annual numbers of documents viewed doubling from 13 718 in 2003 to 28 782 in 2012. Pharmaceuticals were the largest group viewed with 132 316 documents accessed (65.7% of all documents), followed by monographs relating to chemicals 46 061 (22.9%), substances of abuse 6698 (3.3%), plants 6563 (3.3%), supportive care 4668 (2.3%), animals 2553 (1.3%), and other 2396 (1.2%). In regard to the pharmaceuticals, high or rapidly increasing levels of enquiries were identified for venlafaxine, quetiapine, paracetamol, zopiclone and tramadol. Investigation of telephone enquiries to the New Zealand National Poisons Centre showed total poisoning calls increased slightly over the 10 year period, whereas telephone enquiries from hospitals halved. The TOXINZ Internet accessible poisons information database has proved to be a well-utilised addition to the New Zealand National Poisons Centre's service. © 2016 Australasian College for Emergency Medicine and Australasian Society for Emergency Medicine.

  16. PhenDisco: phenotype discovery system for the database of genotypes and phenotypes

    OpenAIRE

    Doan, Son; Lin, Ko-Wei; Conway, Mike; Ohno-Machado, Lucila; Hsieh, Alex; Feupe, Stephanie Feudjio; Garland, Asher; Ross, Mindy K; Jiang, Xiaoqian; Farzaneh, Seena; Walker, Rebecca; Alipanah, Neda; Zhang, Jing; Xu, Hua; Kim, Hyeon-Eui

    2013-01-01

    The database of genotypes and phenotypes (dbGaP) developed by the National Center for Biotechnology Information (NCBI) is a resource that contains information on various genome-wide association studies (GWAS) and is currently available via NCBI's dbGaP Entrez interface. The database is an important resource, providing GWAS data that can be used for new exploratory research or cross-study validation by authorized users. However, finding studies relevant to a particular phenotype of interest is...

  17. The Web-Database Connection Tools for Sharing Information on the Campus Intranet.

    Science.gov (United States)

    Thibeault, Nancy E.

    This paper evaluates four tools for creating World Wide Web pages that interface with Microsoft Access databases: DB Gateway, Internet Database Assistant (IDBA), Microsoft Internet Database Connector (IDC), and Cold Fusion. The system requirements and features of each tool are discussed. A sample application, "The Virtual Help Desk"…

  18. Traditional Chinese Biotechnology

    Science.gov (United States)

    Xu, Yan; Wang, Dong; Fan, Wen Lai; Mu, Xiao Qing; Chen, Jian

    The earliest industrial biotechnology originated in ancient China and developed into a vibrant industry in traditional Chinese liquor, rice wine, soy sauce, and vinegar. It is now a significant component of the Chinese economy valued annually at about 150 billion RMB. Although the production methods had existed and remained basically unchanged for centuries, modern developments in biotechnology and related fields in the last decades have greatly impacted on these industries and led to numerous technological innovations. In this chapter, the main biochemical processes and related technological innovations in traditional Chinese biotechnology are illustrated with recent advances in functional microbiology, microbial ecology, solid-state fermentation, enzymology, chemistry of impact flavor compounds, and improvements made to relevant traditional industrial facilities. Recent biotechnological advances in making Chinese liquor, rice wine, soy sauce, and vinegar are reviewed.

  19. Usability of some databases for information services in Czechoslovak nuclear programme

    International Nuclear Information System (INIS)

    Kakos, A.

    1988-01-01

    The contents were compared of the databases Chemical Abstracts Search, World Patent Index, Excerpta Medica, Inspec and Compendex with INIS, with regard to possible completing of INIS searches with searches in these other databases. On the basis of the results of test searches made in all said databases on selected topics falling under the INIS scope, concrete cases were determined when INIS searches should be completed with data in some of the other databases. The contents analysis method is described with regard to the concrete search topics and areas are given of the overlapping of the databases with INIS. Numerical results are given. (J.B.). 2 tabs

  20. BIM Guidelines Inform Facilities Management Databases: A Case Study over Time

    Directory of Open Access Journals (Sweden)

    Karen Kensek

    2015-08-01

    Full Text Available A building information model (BIM contains data that can be accessed and exported for other uses during the lifetime of the building especially for facilities management (FM and operations. Working under the guidance of well-designed BIM guidelines to insure completeness and compatibility with FM software, architects and contractors can deliver an information rich data model that is valuable to the client. Large owners such as universities often provide these detailed guidelines and deliverable requirements to their building teams. Investigation of the University of Southern California (USC Facilities Management Service’s (FMS website showed a detailed plan including standards, file names, parameter lists, and other requirements of BIM data, which were specifically designated for facilities management use, as deliverables on new construction projects. Three critical details were also unearthed in the reading of these documents: Revit was the default BIM software; COBie was adapted to help meet facilities management goals; and EcoDomus provided a display of the collected data viewed through Navisworks. Published accounts about the Cinema Arts Complex developed with and under these guidelines reported positive results. Further examination with new projects underway reveal the rapidly changing relational database landscape evident in the new USC “Project Record Revit Requirement Execution Plan (PRxP”.

  1. ANALYSIS OF TIME DISTANCES OF ENCRYPTION/DECRYPTION OF MEDICAL INFORMATION SYSTEMS DATABASES FILES

    Directory of Open Access Journals (Sweden)

    Ye. B. Lopin

    2014-02-01

    Full Text Available In the article on the specific example the results of studies medical information systems databases files encryption/decryptiontime have been presented. The present studies are performed using the developed three fundamentally different algorithms, that include Blowfish encryption algorithm as a part. The studies were performed using a specially developed (in the programming environment Delphi 7 computer program "Generators" (author's title and two computers having obsolete configuration and assembled with the Intel Core 2 Duo E8400 processor and the DualCore Intel Pentium E2180 processor. The studies have established that the encryption/decryption of files using the first developed algorithm during execution of which multiple access to the hard drive for reading/writing of 8-byte information blocks of is implemented, takes much longer time (about 10 times than the encryption/decryption using the second and third algorithms during execution of which access to the hard drive for a file reading/writing is performed once.

  2. Fungal biodiversity to biotechnology.

    Science.gov (United States)

    Chambergo, Felipe S; Valencia, Estela Y

    2016-03-01

    Fungal habitats include soil, water, and extreme environments. With around 100,000 fungus species already described, it is estimated that 5.1 million fungus species exist on our planet, making fungi one of the largest and most diverse kingdoms of eukaryotes. Fungi show remarkable metabolic features due to a sophisticated genomic network and are important for the production of biotechnological compounds that greatly impact our society in many ways. In this review, we present the current state of knowledge on fungal biodiversity, with special emphasis on filamentous fungi and the most recent discoveries in the field of identification and production of biotechnological compounds. More than 250 fungus species have been studied to produce these biotechnological compounds. This review focuses on three of the branches generally accepted in biotechnological applications, which have been identified by a color code: red, green, and white for pharmaceutical, agricultural, and industrial biotechnology, respectively. We also discuss future prospects for the use of filamentous fungi in biotechnology application.

  3. BIOTECHNOLOGY : AN OVERVIEW

    Directory of Open Access Journals (Sweden)

    John I. Bruce

    2012-09-01

    Full Text Available Biotechnology as a science includes various aspects of the management and manipulation of biological systems. Recent advances in immunology, molecular biology, cell culture and other associated areas provide an opportunity for scientists to move biology out of the laboratory and into the realms of society. This has many implications which mankind on a whole may not be prepared to cope with at this time. This new capability has been referred to as "Biotechnology". Biotechnology has also been defined as "the integrated use of biochemistry, microbiology, and chemical engineering in order to achieve the capacities of microbes and culture cells". Genetic engineering which includes gene splicing and recombinant DNA-cloning is an example of a recent offshoot of biotechnology. Because of the advent of biotechnology, one can now think of the prospect of engineering tomorrows vaccines. In the past, vaccine development has been laborious and in many instances an unrewarding task. After years of effort only a handful of safe, effective vaccines have emerged. In the biotechnology arena, new methodologies and strategies for immunizing humans and domestic animals against infectious diseases are providing new hope for discovering successful vaccines. While most of the effort in the past has focused on viral vaccine development, attention is now being directed towards vaccines for protection against parasitic diseases. Currently, considerable effort is being made to develop vaccines for malaria, coccidiosis (in fowl, cholera, malaria, schistosomiasis and trypanosomiasis among others.

  4. Environmental biotechnology for sustainability.

    Science.gov (United States)

    Verstraete, W

    2002-03-14

    In the post-industrial society, waste management is integrated in the concepts of responsibility, reliability and continuity. Therefore industry and public office are obliged to implement the concepts of structured environmental management systems more and more strictly. The endpoints are dependent on the type of wastes and on the priorities set by society. They will with time evolve towards more restriction of all kinds of emissions. This will require increasing inputs of labour, information technology and energy into waste treatment and overall waste management. Particularly for aqueous and gaseous wastes that are not contained, continuously improving treatment with maximum re-use and minimum dissipation in the ecosphere will be the trend of the future. Moreover, the public in general and the individual citizen in particular will request to have (bio)assays to monitor regularly and autonomously the quality of his environment. Such advanced waste management requires considerable energy input. It thus may come in conflict with current concerns about CO2-emissions and the Kyoto agreements. Innovative approaches to combine waste management and the International Climate Change Partnership (ICCP) directives, for instance by implementing biological carbon sequestration, are therefore warranted. Biotechnology has a major role to play particularly in terms of advanced treatment down to ng/l-levels and in terms of validating the quality of the environment by means of powerful and intelligent bio-monitoring devices.

  5. 77 FR 21618 - 60-Day Notice of Proposed Information Collection: Civilian Response Corps Database In-Processing...

    Science.gov (United States)

    2012-04-10

    ... DEPARTMENT OF STATE [Public Notice 7843] 60-Day Notice of Proposed Information Collection: Civilian Response Corps Database In-Processing Electronic Form, OMB Control Number 1405-0168, Form DS-4096... Management and Budget (OMB) approval for the information collection described below. The purpose of this...

  6. Statistics information of rice EST mapping results - RGP estmap2001 | LSDB Archive [Life Science Database Archive metadata

    Lifescience Database Archive (English)

    Full Text Available List Contact us RGP estmap2001 Statistics information of rice EST mapping results Data detail Data name Statistics...of This Database Site Policy | Contact Us Statistics information of rice EST mapping results - RGP estmap2001 | LSDB Archive ...

  7. UMLS-based conceptual queries to biomedical information databases: an overview of the project ARIANE. Unified Medical Language System.

    Science.gov (United States)

    Joubert, M; Fieschi, M; Robert, J J; Volot, F; Fieschi, D

    1998-01-01

    The aim of the project ARIANE is to model and implement seamless, natural, and easy-to-use interfaces with various kinds of heterogeneous biomedical information databases. A conceptual model of some of the Unified Medical Language System (UMLS) knowledge sources has been developed to help end users to query information databases. A query is represented by a conceptual graph that translates the deep structure of an end-user's interest in a topic. A computational model exploits this conceptual model to build a query interactively represented as query graph. A query graph is then matched to the data graph built with data issued from each record of a database by means of a pattern-matching (projection) rule that applies to conceptual graphs. Prototypes have been implemented to test the feasibility of the model with different kinds of information databases. Three cases are studied: 1) information in records is structured according to the UMLS knowledge sources; 2) information is able to be structured without error in the frame of the UMLS knowledge; 3) information cannot be structured. In each case the pattern-matching is processed by the projection rule according to the structure of information that has been implemented in the databases. The conceptual graphs theory provides with a homogeneous and powerful formalism able to represent both concepts, instances of concepts in medical contexts, and associations by means of relationships, and to represent data at different levels of details. The conceptual-graphs formalism allows powerful capabilities to operate a semantic integration of information databases using the UMLS knowledge sources.

  8. Production and employment impacts of new technologies: analysis for biotechnology

    OpenAIRE

    Wydra, Sven

    2009-01-01

    Biotechnology is often regarded as a key technology with high potential for far-reaching social, environmental and economic impacts. Among others, the development and diffusion of biotechnology may have considerable economic effects on production and employment. This paper analyzes the economic impacts of different diffusion paths of biotechnology in some major application fields. Bottom-up technology information from literature, expert judgements and explicit scenario assumptions for variou...

  9. Medical Biotechnology Trends and Achievements in Iran

    Science.gov (United States)

    Mahboudi, Fereidoun; Hamedifar, Haleh; Aghajani, Hamideh

    2012-01-01

    A healthcare system has been the most important priority for all governments worldwide. Biotechnology products have affected the promotion of health care over the last thirty years. During the last several decades, Iran has achieved significant success in extending healthcare to the rural areas and in reducing the rates of infant mortality and increasing population growth. Biomedical technology as a converging technology is considered a helpful tool to fulfill the Iranian healthcare missions. The number of biotechnology products has reached 148 in 2012. The total sales have increased to 98 billion USD without considering vaccines and plasma derived proteins in 2012. Iran is one of the leading countries in the Middle East and North Africa in the area of Medical biotechnology. The number of biotechnology medicines launched in Iran is 13 products until 2012. More than 15 products are in pipelines now. Manufacturers are expecting to receive the market release for more than 8 products by the end of 2012. Considering this information, Iran will lead the biotechnology products especially in area of biosimilars in Asia after India in next three years. The present review will discuss leading policy, decision makers’ role, human resource developing system and industry development in medical biotechnology. PMID:23407888

  10. MEROPS: the peptidase database.

    Science.gov (United States)

    Rawlings, Neil D; Morton, Fraser R; Kok, Chai Yin; Kong, Jun; Barrett, Alan J

    2008-01-01

    Peptidases (proteolytic enzymes or proteases), their substrates and inhibitors are of great relevance to biology, medicine and biotechnology. The MEROPS database (http://merops.sanger.ac.uk) aims to fulfil the need for an integrated source of information about these. The organizational principle of the database is a hierarchical classification in which homologous sets of peptidases and protein inhibitors are grouped into protein species, which are grouped into families and in turn grouped into clans. Important additions to the database include newly written, concise text annotations for peptidase clans and the small molecule inhibitors that are outside the scope of the standard classification; displays to show peptidase specificity compiled from our collection of known substrate cleavages; tables of peptidase-inhibitor interactions; and dynamically generated alignments of representatives of each protein species at the family level. New ways to compare peptidase and inhibitor complements between any two organisms whose genomes have been completely sequenced, or between different strains or subspecies of the same organism, have been devised.

  11. Colorado Late Cenozoic Fault and Fold Database and Internet Map Server: User-friendly technology for complex information

    Science.gov (United States)

    Morgan, K.S.; Pattyn, G.J.; Morgan, M.L.

    2005-01-01

    Internet mapping applications for geologic data allow simultaneous data delivery and collection, enabling quick data modification while efficiently supplying the end user with information. Utilizing Web-based technologies, the Colorado Geological Survey's Colorado Late Cenozoic Fault and Fold Database was transformed from a monothematic, nonspatial Microsoft Access database into a complex information set incorporating multiple data sources. The resulting user-friendly format supports easy analysis and browsing. The core of the application is the Microsoft Access database, which contains information compiled from available literature about faults and folds that are known or suspected to have moved during the late Cenozoic. The database contains nonspatial fields such as structure type, age, and rate of movement. Geographic locations of the fault and fold traces were compiled from previous studies at 1:250,000 scale to form a spatial database containing information such as length and strike. Integration of the two databases allowed both spatial and nonspatial information to be presented on the Internet as a single dataset (http://geosurvey.state.co.us/pubs/ceno/). The user-friendly interface enables users to view and query the data in an integrated manner, thus providing multiple ways to locate desired information. Retaining the digital data format also allows continuous data updating and quick delivery of newly acquired information. This dataset is a valuable resource to anyone interested in earthquake hazards and the activity of faults and folds in Colorado. Additional geologic hazard layers and imagery may aid in decision support and hazard evaluation. The up-to-date and customizable maps are invaluable tools for researchers or the public.

  12. Searching for evidence or approval? A commentary on database search in systematic reviews and alternative information retrieval methodologies.

    Science.gov (United States)

    Delaney, Aogán; Tamás, Peter A

    2018-03-01

    Despite recognition that database search alone is inadequate even within the health sciences, it appears that reviewers in fields that have adopted systematic review are choosing to rely primarily, or only, on database search for information retrieval. This commentary reminds readers of factors that call into question the appropriateness of default reliance on database searches particularly as systematic review is adapted for use in new and lower consensus fields. It then discusses alternative methods for information retrieval that require development, formalisation, and evaluation. Our goals are to encourage reviewers to reflect critically and transparently on their choice of information retrieval methods and to encourage investment in research on alternatives. Copyright © 2017 John Wiley & Sons, Ltd.

  13. Similarity landscapes: An improved method for scientific visualization of information from protein and DNA database searches

    Energy Technology Data Exchange (ETDEWEB)

    Dogget, N.; Myers, G. [Los Alamos National Lab., NM (United States); Wills, C.J. [Univ. of California, San Diego, CA (United States)

    1998-12-01

    This is the final report of a three-year, Laboratory Directed Research and Development (LDRD) project at the Los Alamos National Laboratory (LANL). The authors have used computer simulations and examination of a variety of databases to answer questions about a wide range of evolutionary questions. The authors have found that there is a clear distinction in the evolution of HIV-1 and HIV-2, with the former and more virulent virus evolving more rapidly at a functional level. The authors have discovered highly non-random patterns in the evolution of HIV-1 that can be attributed to a variety of selective pressures. In the course of examination of microsatellite DNA (short repeat regions) in microorganisms, the authors have found clear differences between prokaryotes and eukaryotes in their distribution, differences that can be tied to different selective pressures. They have developed a new method (topiary pruning) for enhancing the phylogenetic information contained in DNA sequences. Most recently, the authors have discovered effects in complex rainforest ecosystems that indicate strong frequency-dependent interactions between host species and their parasites, leading to the maintenance of ecosystem variability.

  14. Integration Between Aqli And Naqli In Development Of Database For Hospital Information System

    Directory of Open Access Journals (Sweden)

    Muhammad Mursyidan Mah Dahwi

    2015-08-01

    Full Text Available Abstract Database era has been appear during Prophet Muhammad S.A.W. We are using the same concept but only deployed in the medical environment with security features which is related to aqli and naqli. The development of a system not only covered the ability of the system to be functioned and execute very well but a good and efficient system must be able to communicate with the users and become a user friendly system. This research is about developing Hospital Patient Information System developed for Hematology Ward and Hemato-oncology Laboratory at the Hospital UniversitiSains Malaysia HUSM based on the aqli and naqli. It lacks of security in term of data integrity of the system. It will be enhanced in its security features which will be implemented with the data integrity feature and also password encryption to overcome the problems. As a result an automated calculation of blood series and graph production as for data analysis will be implemented in this system.An approach of agile method is the chosen process to be used in realizing this research. This system will come out with the ability of protection in data integrity password encryption and automatic calculation in order to reduce the fraud and human errors.

  15. Prioritizing PubMed articles for the Comparative Toxicogenomic Database utilizing semantic information.

    Science.gov (United States)

    Kim, Sun; Kim, Won; Wei, Chih-Hsuan; Lu, Zhiyong; Wilbur, W John

    2012-01-01

    The Comparative Toxicogenomics Database (CTD) contains manually curated literature that describes chemical-gene interactions, chemical-disease relationships and gene-disease relationships. Finding articles containing this information is the first and an important step to assist manual curation efficiency. However, the complex nature of named entities and their relationships make it challenging to choose relevant articles. In this article, we introduce a machine learning framework for prioritizing CTD-relevant articles based on our prior system for the protein-protein interaction article classification task in BioCreative III. To address new challenges in the CTD task, we explore a new entity identification method for genes, chemicals and diseases. In addition, latent topics are analyzed and used as a feature type to overcome the small size of the training set. Applied to the BioCreative 2012 Triage dataset, our method achieved 0.8030 mean average precision (MAP) in the official runs, resulting in the top MAP system among participants. Integrated with PubTator, a Web interface for annotating biomedical literature, the proposed system also received a positive review from the CTD curation team.

  16. Brain Stroke Detection by Microwaves Using Prior Information from Clinical Databases

    Directory of Open Access Journals (Sweden)

    Natalia Irishina

    2013-01-01

    Full Text Available Microwave tomographic imaging is an inexpensive, noninvasive modality of media dielectric properties reconstruction which can be utilized as a screening method in clinical applications such as breast cancer and brain stroke detection. For breast cancer detection, the iterative algorithm of structural inversion with level sets provides well-defined boundaries and incorporates an intrinsic regularization, which permits to discover small lesions. However, in case of brain lesion, the inverse problem is much more difficult due to the skull, which causes low microwave penetration and highly noisy data. In addition, cerebral liquid has dielectric properties similar to those of blood, which makes the inversion more complicated. Nevertheless, the contrast in the conductivity and permittivity values in this situation is significant due to blood high dielectric values compared to those of surrounding grey and white matter tissues. We show that using brain MRI images as prior information about brain's configuration, along with known brain dielectric properties, and the intrinsic regularization by structural inversion, allows successful and rapid stroke detection even in difficult cases. The method has been applied to 2D slices created from a database of 3D real MRI phantom images to effectively detect lesions larger than 2.5 × 10−2 m diameter.

  17. 75 FR 31795 - Office of Biotechnology Activities; Recombinant DNA Research: Amended Notice of Meeting

    Science.gov (United States)

    2010-06-04

    ... DEPARTMENT OF HEALTH AND HUMAN SERVICES National Institutes of Health Office of Biotechnology Activities; Recombinant DNA Research: Amended Notice of Meeting ACTION: Notice of cancellation of... information. Dated: May 26, 2010. Jacqueline Corrigan-Curay, Acting Director, Office of Biotechnology...

  18. Q-bank, a database with information for identification of plant quarantine plant pest and diseases

    NARCIS (Netherlands)

    Bonants, P.J.M.; Edema, M.J.; Robert, V.

    2013-01-01

    This paper describes the database Q-bank (www.q-bank.eu). This freely accessible database contains data on plant pathogenic quarantine organisms to allow fast and reliable identification. Development of accurate identification tools for plant pests is vital to support European Plant Health Policies.

  19. A Straightforward Method for Advance Estimation of User Charges for Information in Numeric Databases.

    Science.gov (United States)

    Jarvelin, Kalervo

    1986-01-01

    Describes a method for advance estimation of user charges for queries in relational data model-based numeric databases when charges are based on data retrieved. Use of this approach is demonstrated by sample queries to an imaginary marketing database. The principles and methods of this approach and its relevance are discussed. (MBR)

  20. DATABASES DEVELOPED IN INDIA FOR BIOLOGICAL SCIENCES

    Directory of Open Access Journals (Sweden)

    Gitanjali Yadav

    2017-09-01

    Full Text Available The complexity of biological systems requires use of a variety of experimental methods with ever increasing sophistication to probe various cellular processes at molecular and atomic resolution. The availability of technologies for determining nucleic acid sequences of genes and atomic resolution structures of biomolecules prompted development of major biological databases like GenBank and PDB almost four decades ago. India was one of the few countries to realize early, the utility of such databases for progress in modern biology/biotechnology. Department of Biotechnology (DBT, India established Biotechnology Information System (BTIS network in late eighties. Starting with the genome sequencing revolution at the turn of the century, application of high-throughput sequencing technologies in biology and medicine for analysis of genomes, transcriptomes, epigenomes and microbiomes have generated massive volumes of sequence data. BTIS network has not only provided state of the art computational infrastructure to research institutes and universities for utilizing various biological databases developed abroad in their research, it has also actively promoted research and development (R&D projects in Bioinformatics to develop a variety of biological databases in diverse areas. It is encouraging to note that, a large number of biological databases or data driven software tools developed in India, have been published in leading peer reviewed international journals like Nucleic Acids Research, Bioinformatics, Database, BMC, PLoS and NPG series publication. Some of these databases are not only unique, they are also highly accessed as reflected in number of citations. Apart from databases developed by individual research groups, BTIS has initiated consortium projects to develop major India centric databases on Mycobacterium tuberculosis, Rice and Mango, which can potentially have practical applications in health and agriculture. Many of these biological

  1. Biotechnological production of vanillin.

    Science.gov (United States)

    Priefert, H; Rabenhorst, J; Steinbüchel, A

    2001-08-01

    Vanillin is one of the most important aromatic flavor compounds used in foods, beverages, perfumes, and pharmaceuticals and is produced on a scale of more than 10 thousand tons per year by the industry through chemical synthesis. Alternative biotechnology-based approaches for the production are based on bioconversion of lignin, phenolic stilbenes, isoeugenol, eugenol, ferulic acid, or aromatic amino acids, and on de novo biosynthesis, applying fungi, bacteria, plant cells, or genetically engineered microorganisms. Here, the different biosynthesis routes involved in biotechnological vanillin production are discussed.

  2. Agave biotechnology: an overview.

    Science.gov (United States)

    Nava-Cruz, Naivy Y; Medina-Morales, Miguel A; Martinez, José L; Rodriguez, R; Aguilar, Cristóbal N

    2015-01-01

    Agaves are plants of importance both in Mexican culture and economy and in other Latin-American countries. Mexico is reported to be the place of Agave origin, where today, scientists are looking for different industrial applications without compromising its sustainability and preserving the environment. To make it possible, a deep knowledge of all aspects involved in production process, agro-ecological management and plant biochemistry and physiology is required. Agave biotechnology research has been focusing on bio-fuels, beverages, foods, fibers, saponins among others. In this review, we present the advances and challenges of Agave biotechnology.

  3. Colloids in Biotechnology

    CERN Document Server

    Fanun, Monzer

    2010-01-01

    Colloids have come a long way from when Thomas Graham coined the term colloid to describe 'pseudo solutions'. This book enables scientists to close the gap between extensive research and translation into commercial options in biomedicine and biotechnology. It covers biosurfactants and surface properties, phase behavior, and orientational change of surfactant mixtures with peptides at the interface. It also covers adsorption of polymers and biopolymers on the surface and interface, discusses colloidal nanoparticles and their use in biotechnology, and delves into bioadhesion and microencapsulati

  4. Informational database methodology for urban risk analysis.Case study: the historic centre of Bucharest

    Science.gov (United States)

    Armas, I.; Dumitrascu, S.

    2009-04-01

    , but is also a very populated area, this being factors that favour a high susceptibility level. In addition, the majority of the buildings are included in the first and second categories of seismic risk, being built between 1875 and 1940, the age of the buildings establishing an increased vulnerability to natural hazards. The methodology was developed through the contribution of three partner universities from Bucharest: the University of Bucharest, the Academy for Economic Studies and the Technical University of Constructions. The method suggested was based on the analysis and processing of digital and statistical spatial information resulted from 1:500 topographical plans, satellite pictures, archives and historical maps used for the identification of the age of the buildings. Also, an important stage was represented by the field investigations that resulted with the data used in the assessment of the buildings: year of construction, location and vicinity, height, number of floors, state and function of the building, equipment and construction type. The information collected from the field together with the data resulted from the digitization of the ortophotoplans were inserted in ArcGIS in order to compile the database. Furthermore, the team from the Cybernetics Faculty developed a special software package in Visual Studio and SQL server in order to insert the sheets in GIS so that they could be statistically processed. The final product of the study is a program that includes as main functions editing, the analysis based on selected factors (individual or group) and viewing of building information in the shape of maps or 3D visualization. The strengths of the informational system resulted are given by the extended range of applicability, the short processing period, accessibility, capacity of support for a large amount of information and, thus, standing out as an adequate instrument to fit the needs of a susceptible population.

  5. [Cystic Fibrosis Cloud database: An information system for storage and management of clinical and microbiological data of cystic fibrosis patients].

    Science.gov (United States)

    Prieto, Claudia I; Palau, María J; Martina, Pablo; Achiary, Carlos; Achiary, Andrés; Bettiol, Marisa; Montanaro, Patricia; Cazzola, María L; Leguizamón, Mariana; Massillo, Cintia; Figoli, Cecilia; Valeiras, Brenda; Perez, Silvia; Rentería, Fernando; Diez, Graciela; Yantorno, Osvaldo M; Bosch, Alejandra

    2016-01-01

    The epidemiological and clinical management of cystic fibrosis (CF) patients suffering from acute pulmonary exacerbations or chronic lung infections demands continuous updating of medical and microbiological processes associated with the constant evolution of pathogens during host colonization. In order to monitor the dynamics of these processes, it is essential to have expert systems capable of storing and subsequently extracting the information generated from different studies of the patients and microorganisms isolated from them. In this work we have designed and developed an on-line database based on an information system that allows to store, manage and visualize data from clinical studies and microbiological analysis of bacteria obtained from the respiratory tract of patients suffering from cystic fibrosis. The information system, named Cystic Fibrosis Cloud database is available on the http://servoy.infocomsa.com/cfc_database site and is composed of a main database and a web-based interface, which uses Servoy's product architecture based on Java technology. Although the CFC database system can be implemented as a local program for private use in CF centers, it can also be used, updated and shared by different users who can access the stored information in a systematic, practical and safe manner. The implementation of the CFC database could have a significant impact on the monitoring of respiratory infections, the prevention of exacerbations, the detection of emerging organisms, and the adequacy of control strategies for lung infections in CF patients. Copyright © 2015 Asociación Argentina de Microbiología. Publicado por Elsevier España, S.L.U. All rights reserved.

  6. Disclosing Biology Teachers' Beliefs about Biotechnology and Biotechnology Education

    Science.gov (United States)

    Fonseca, Maria Joao; Costa, Patricio; Lencastre, Leonor; Tavares, Fernando

    2012-01-01

    Teachers have been shown to frequently avoid addressing biotechnology topics. Aiming to understand the extent to which teachers' scarce engagement in biotechnology teaching is influenced by their beliefs and/or by extrinsic constraints, such as practical limitations, this study evaluates biology teachers' beliefs about biotechnology and…

  7. Concepts in Biotechnology An Affordable Overview of Biotechnology ...

    Indian Academy of Sciences (India)

    Home; Journals; Resonance – Journal of Science Education; Volume 2; Issue 9. Concepts in Biotechnology An Affordable Overview of Biotechnology Through Self Study ... Author Affiliations. Narayan S Punekar1. Molecular Enzymology Group, Biotechnology Centre, Indian Institute of Technology, Mumbai 400 076, India.

  8. Biotechnology policies and performance in central and eastern Europe

    NARCIS (Netherlands)

    Senker, J.; Enzing, C.; Reiss, T.

    2008-01-01

    This paper assesses how far ten Central and Eastern European (CEE) countries have 'caught up' in biotechnology on the basis of information about the policies and funding for biotechnology research and commercialisation from 2002-2005 and on the research and commercialisation performance of these

  9. Current and Future Leaders' Perceptions of Agricultural Biotechnology

    Science.gov (United States)

    Wingenbach, Gary J.; Miller, Rene P.

    2009-01-01

    Were elected state FFA officers' attitudes toward agricultural biotechnology significantly different from elected Texas legislators' attitudes about the same topic? The purpose of this study was to determine if differences existed in agricultural biotechnology perceptions or information source preferences when compared by leadership status:…

  10. Assessment of potential risks of 11 pharmaceuticals for the environment : Using environmental information from public databases

    NARCIS (Netherlands)

    van der Aa NGFM; van Vlaardingen PLA; van Leeuwen LC; Post M; IMG

    2012-01-01

    Restanten van geneesmiddelen in het watermilieu kunnen schadelijk zijn voor het ecosysteem. Het RIVM heeft voor 22 geneesmiddelen onderzocht of enkele openbare databases van overheden informatie bevatten over het optreden van schadelijke effecten (milieu-eindpunten). Deze geneesmiddelen zijn

  11. A genotypic and phenotypic information source for marker-assisted selection of cereals: the CEREALAB database

    Science.gov (United States)

    Milc, Justyna; Sala, Antonio; Bergamaschi, Sonia; Pecchioni, Nicola

    2011-01-01

    The CEREALAB database aims to store genotypic and phenotypic data obtained by the CEREALAB project and to integrate them with already existing data sources in order to create a tool for plant breeders and geneticists. The database can help them in unravelling the genetics of economically important phenotypic traits; in identifying and choosing molecular markers associated to key traits; and in choosing the desired parentals for breeding programs. The database is divided into three sub-schemas corresponding to the species of interest: wheat, barley and rice; each sub-schema is then divided into two sub-ontologies, regarding genotypic and phenotypic data, respectively. Database URL: http://www.cerealab.unimore.it/jws/cerealab.jnlp PMID:21247929

  12. Biotechnological advances in Lilium

    NARCIS (Netherlands)

    Bakhshaie, Mehdi; Khosravi, Solmaz; Azadi, Pejman; Bagheri, Hedayat; Tuyl, van Jaap M.

    2016-01-01

    Modern powerful techniques in plant biotechnology have been developed in lilies (Lilium spp., Liliaceae) to propagate, improve and make new phenotypes. Reliable in vitro culture methods are available to multiply lilies rapidly and shorten breeding programs. Lilium is also an ideal model plant to

  13. TSCA Biotechnology Notifications Status

    Science.gov (United States)

    This Notifications Table lists only those submissions received under the Biotechnology Regulation, beginning in 1998. From the Table, you can link to a brief summary of select submission and, in many cases, to a fact sheet on the decision reached by OPPT.

  14. Biotechnology of trees: Chestnut

    Science.gov (United States)

    C.D. Nelson; W.A. Powell; S.A. Merkle; J.E. Carlson; F.V. Hebard; N Islam-Faridi; M.E. Staton; L. Georgi

    2014-01-01

    Biotechnology has been practiced on chestnuts (Castanea spp.) for many decades, including vegetative propagation, controlled crossing followed by testing and selection, genetic and cytogenetic mapping, genetic modifi cation, and gene and genome sequencing. Vegetative propagation methods have ranged from grafting and rooting to somatic embryogenesis, often in...

  15. State responses to biotechnology.

    Science.gov (United States)

    Harris, Rebecca C

    2015-01-01

    This article reviews biotechnology legislation in the 50 states for 11 policy areas spanning 1990-2010, an era of immense growth in biotechnology, genetic knowledge, and significant policy development. Policies regarding health insurance, life insurance, long-term care insurance, DNA data bank collection, biotech research protection, biotech promotion and support, employment discrimination, genetic counselor licensing, human cloning, and genetic privacy each represent major policy responses arising from biotechnology and coinciding with key areas of state regulation (insurance, criminal justice, economic development, labor law, health and safety, privacy, and property rights). This analysis seeks to answer three questions regarding biotechnology legislation at the state level: who is acting (policy adoption), when is policy adopted (policy timing), and what is policy doing (policy content). Theoretical concerns examine state ideology (conservative or liberal), policy type (economic or moral), and the role of external events (federal law, news events, etc.) on state policy adoption. Findings suggest ideological patterns in adoption, timing, and content of biotech policy. Findings also suggest economic policies tend to be more uniform in content than moral policies, and findings also document a clear link between federal policy development, external events, and state policy response.

  16. Biotechnology in weed control

    Science.gov (United States)

    Biotechnology can be used to enhance the management of weeds in several ways. Crops have been made resistant to herbicides by inserting transgenes that impart herbicide resistance into the plant genome. Glyphosate and glufosinate-resistant crops are commercialized in North America and crops made res...

  17. African Journal of Biotechnology

    African Journals Online (AJOL)

    The African Journal of Biotechnology (AJB), a new broad-based journal, was founded on two key tenets: To publish the most exciting research in all areas of applied biochemistry, industrial microbiology, molecular biology, genomics and proteomics, food and agricultural technologies, and metabolic engineering. Secondly ...

  18. Biotechnology: interferon patent contested.

    Science.gov (United States)

    Earl, C; Beardsley, T

    Biogen, a biotechnology company based in Cambridge, Mass., and Geneva, Switzerland, has been notified by the European Patent Office that it will receive a product patent for its alpha interferon synthesized by recombinant DNA technology. Genentech, a San Francisco company which claims priority for producing mature interferon, is planning a vigorous appeal of the decision.

  19. Biotechnology and Innovation Systems

    International Development Research Centre (IDRC) Digital Library (Canada)

    His main research activities are connected to science and technology policies and national and local systems of innovation in less developed countries. ...... of the Brazilian productive structure in energy-related areas – bio-fuels, oil, and so on – biotechnology research has started to target energy-related activities. However ...

  20. Biotechnological Innovations in Aquaculture

    Directory of Open Access Journals (Sweden)

    Mangesh M. Bhosale

    2016-04-01

    Full Text Available Aquaculture is gaining commendable importance to meet the required protein source for ever increasing human population. The aquaculture industry is currently facing problems on developing economically viable production systems by reducing the impact on environment. Sustainable and enhanced fish production from aquaculture may be better achieved through application of recent biotechnological innovations. Utilisation of transgenic technology has led to production of fishes with faster growth rate with disease resistance. The full advantage of this technology could not be achieved due to concern of acceptance for Genetically Modified Organisms (GMOs. The biotechnological intervention in developing plant based feed ingredient in place of fish meal which contain high phosphorus is of prime area of attention for fish feed industry. The replacement of fish meal will also reduce fish feed cost to a greater extent. Year round fish seed production of carps through various biotechnological interventions is also need of the hour. This paper discusses technical, environmental and managerial considerations regarding the use of these biotechnological tools in aquaculture along with the advantages of research application and its commercialization.

  1. Biotechnologies and Human Dignity

    Science.gov (United States)

    Sweet, William; Masciulli, Joseph

    2011-01-01

    In this article, the authors review some contemporary cases where biotechnologies have been employed, where they have had global implications, and where there has been considerable debate. The authors argue that the concept of dignity, which lies at the center of such documents as the 2005 Universal Declaration on Bioethics and Human Rights, the…

  2. A sign-theoretic approach to biotechnology

    DEFF Research Database (Denmark)

    Bruni, Luis Emilio

    to exemplify what is the relevance of a sign-theoretic approach to biotechnology. In particular, I introduce the notion of digital-analogical consensus as a semiotic pattern for the creation of complex logical products that constitute specific signs. The chapter ends with some examples of conspicuous semiotic......, translation, transformation and transmission of information. The idea is also to investigate how this debate may influence the “integrative agenda” in biology, especially at a time in which biotechnology is considered to be the industrial use of “biological information”. I introduce concepts....... Finally I make a connection between a sign-theoretic approach to biotechnology and sustainability, with a glimpse into the future....

  3. High energy nuclear database: a test-bed for nuclear data information technology

    Energy Technology Data Exchange (ETDEWEB)

    Brown, D.A.; Vogt, R.; Beck, B.; Pruet, J. [Lawrence Livermore National Lab, Livermore, CA (United States); Vogt, R. [Davis Univ. of California, CA (United States)

    2008-07-01

    We describe the development of an on-line high-energy heavy-ion experimental database. When completed, the database will be searchable and cross-indexed with relevant publications, including published detector descriptions. While this effort is relatively new, it will eventually contain all published data from older heavy-ion programs as well as published data from current and future facilities. These data include all measured observables in proton-proton, proton-nucleus and nucleus-nucleus collisions. Once in general use, this database will have tremendous scientific payoff as it makes systematic studies easier and allows simpler benchmarking of theoretical models for a broad range of experiments. Furthermore, there is a growing need for compilations of high-energy nuclear data for applications including stockpile stewardship, technology development for inertial confinement fusion, target and source development for upcoming facilities such as the International Linear Collider and homeland security. This database is part of a larger proposal that includes the production of periodic data evaluations and topical reviews. These reviews would provide an alternative and impartial mechanism to resolve discrepancies between published data from rival experiments and between theory and experiment. Since this database will be a community resource, it requires the high-energy nuclear physics community's financial and manpower support. This project serves as a test-bed for the further development of an object-oriented nuclear data format and database system. By using 'off-the-shelf' software tools and techniques, the system is simple, robust, and extensible. Eventually we envision a 'Grand Unified Nuclear Format' encapsulating data types used in the ENSDF, Endf/B, EXFOR, NSR and other formats, including processed data formats. (authors)

  4. Wireless access to a pharmaceutical database: A demonstrator for data driven Wireless Application Prorocol (WAP) applications in medical information processing

    DEFF Research Database (Denmark)

    Hansen, Michael Schacht; Dørup, Jens

    2001-01-01

    script for easy update of the database. Data were distributed in 35 interrelated tables. Each pharmaceutical brand name was given its own card with links to general information about the drug, active substances, contraindications etc. Access was available through 1) browsing therapeutic groups and 2......) searching for a brand name. The database interface was programmed in the server-side scripting language PHP3. RESULTS: A free, open source Wireless Application Protocol gateway to a pharmaceutical catalogue was established to allow dial-in access independent of commercial Wireless Application Protocol...... service providers. The application was tested on the Nokia 7110 and Ericsson R320s cellular phones. CONCLUSIONS: We have demonstrated that Wireless Application Protocol-based access to a dynamic clinical database can be established using open source freeware. The project opens perspectives for a further...

  5. Knowledge base technology for CT-DIMS: Report 1. [CT-DIMS (Cutting Tool - Database and Information Management System)

    Energy Technology Data Exchange (ETDEWEB)

    Kelley, E.E.

    1993-05-01

    This report discusses progress on the Cutting Tool-Database and Information Management System (CT-DIMS) project being conducted by the University of Illinois Urbana-Champaign (UIUC) under contract to the Department of Energy. This project was initiated in October 1991 by UIUC. The Knowledge-Based Engineering Systems Research Laboratory (KBESRL) at UIUC is developing knowledge base technology and prototype software for the presentation and manipulation of the cutting tool databases at Allied-Signal Inc., Kansas City Division (KCD). The graphical tool selection capability being developed for CT-DIMS in the Intelligent Design Environment for Engineering Automation (IDEEA) will provide a concurrent environment for simultaneous access to tool databases, tool standard libraries, and cutting tool knowledge.

  6. Database Description - RMOS | LSDB Archive [Life Science Database Archive metadata

    Lifescience Database Archive (English)

    Full Text Available List Contact us RMOS Database Description General information of database Database name RMOS Alternative nam...arch Unit Shoshi Kikuchi E-mail : Database classification Plant databases - Rice Microarray Data and other Gene Expression Database...s Organism Taxonomy Name: Oryza sativa Taxonomy ID: 4530 Database description The Ric...e Microarray Opening Site is a database of comprehensive information for Rice Mic...es and manner of utilization of database You can refer to the information of the

  7. Connecting Learners: The Role of Biotechnology Programme in Preparing Students for the Industry

    Science.gov (United States)

    Mohd Saruan, Nadiah; Sagran, Avinash; Fadzil, Kamal Solhaimi; Razali, Zuliana; Ow Phui San, Rebecca; Somasundram, Chandran

    2015-01-01

    The recent growth of biotechnology requires a wide range of expertise within the industry. Education is the primary platform for students to gain information and knowledge on biotechnology. In Malaysia where biotechnology is relatively new, education programs and courses must be tailored to meet the demands of the industry. A combination of…

  8. Knowledge and Attitudes towards Biotechnology of Elementary Education Preservice Teachers: The First Spanish Experience

    Science.gov (United States)

    Casanoves, Marina; González, Ángel; Salvadó, Zoel; Haro, Juan; Novo, Maite

    2015-01-01

    Due to the important impact that biotechnology has on current Western societies, well-informed critical citizens are needed. People prepared to make conscious decisions about aspects of biotechnology that relate to their own lives. Teachers play a central role in all education systems. Thus, the biotechnological literacy of preservice teachers is…

  9. Biotechnological Patents Applications of the Deuterium Oxide in Human Health.

    Science.gov (United States)

    da S Mariano, Reysla M; Bila, Wendell C; Trindade, Maria Jaciara F; Lamounier, Joel A; Galdino, Alexsandro S

    2017-01-01

    Deuterium oxide is a molecule that has been used for decades in several studies related to human health. Currently, studies on D2O have mobilized a "Race for Patenting" worldwide. Several patents have been registered from biomedical and technological studies of D2O showing the potential of this stable isotope in industry and health care ecosystems. Most of the patents related to the applications of the deuterium oxide in human health have been summarized in this review. The following patents databases were consulted: European Patent Office (Espacenet), the United States Patent and Trademark Office (USPTO), the United States Latin America Patents (LATIPAT), Patent scope -Search International and National Patent Collections (WIPO), Google Patents and Free Patents Online. With this review, the information was collected on recent publications including 22 patents related to deuterium oxide and its applications in different areas. This review showed that deuterium oxide is a promising component in different areas, including biotechnology, chemistry and medicine. In addition, the knowledge of this compound was covered, reinforcing its importance in the field of biotechnology and human health. Copyright© Bentham Science Publishers; For any queries, please email at epub@benthamscience.org.

  10. Gulf-Wide Information System, Environmental Sensitivity Index National Heritage Program Database, Geographic NAD83, LDWF (2001) [esi_nhp_LDWF_2001

    Data.gov (United States)

    Louisiana Geographic Information Center — This data set contains sensitive biological resource data developed from the Louisiana National Heritage Program (NHP) database for coastal Louisiana. Vector...

  11. A comparison of searching the Cochrane library databases via CRD, Ovid and Wiley: implications for systematic searching and information services.

    Science.gov (United States)

    Craven, Jenny; Jefferies, Jayne; Kendrick, Jenny; Nicholls, Dave; Boynton, Janette; Frankish, Ruth

    2014-03-01

    The Cochrane Library databases are available via different interfaces; evidence in the literature, together with anecdotal evidence, shows interfaces perform differently. To ensure the quality of searches, a study was undertaken to systematically explore the functionality of interfaces. To demonstrate differences in functionality when searching the same databases across different interfaces; to discuss the implications this may have on searching; and in a wider context, to suggest a 'best match' for comparable searching. Detailed cross-comparisons of a selection of search functions including MeSH terms, free text, proximity operators and truncation were undertaken in databases accessed via CRD, Wiley and Ovid. Up to three terms per function were selected and analysed. Differences were identified in the way searches for MeSH headings are executed, which fields are searched, how proximity operators perform, the word order searched and where terms are searched. This adds to a body of evidence demonstrating a lack of consistency in searching across different interfaces. A 'best match' for comparable searching is suggested. Differences between interfaces offering the same database content can have implications for the success of a search, on user education, and on database evaluation and purchasing decisions. © 2014 The authors. Health Information and Libraries Journal © 2014 Health Libraries Group.

  12. Environmental Biotechnology in China

    Science.gov (United States)

    Liu, Shuang Jiang; Liu, Lei; Chaudhry, Muhammad Tausif; Wang, Lei; Chen, Ying Guang; Zhou, Qi; Liu, He; Chen, Jian

    Environmental biotechnology has emerged as an important measure to tackle the environmental pollution as China experiences great economic success. Over the past decade, much emphasis has been paid to the following fields in environmental biotechnology: microbial degradation of toxic and organic chemicals, bio-treatment of wastewater, waste recycling. The Chinese researchers have done a lot of work to understand the natural degradation processes for organic and toxic compounds and finally to clean these compounds from polluted environments. For the treatment of wastewater, many new processes were proposed and optimized to meet the more strict effluent standards in China. Finally, more and more attention has been paid to the reuse of discharged wastes. In this chapter we review the development in the above fields.

  13. [Application of molecular biotechnology in Pharmacognosy].

    Science.gov (United States)

    Tong, Yuan-Yuan; Liu, Yang; Wang, Jun-Wen; Yang, Ce; Huang, Man-Ting; Li, Hai-Yan

    2016-02-01

    Using the methods of informetrics analysis, articles retrieved from the database of CNKI were statistically analyzed on development course and knowledge system, so as to reflect the overall situation of pharmacognostical studies by molecular biotechnology. The result shows that the research on pharmacognosy by molecular biotechnology is an inter-disciplinary research area, the major research fields can be divided into 7 categories, including molecular identification of Chinese medicinal materials, molecular systematics and genetic diversity analysis of Chinese medicinal materials, biosynthesis and bioregulation of secondary metabolites in medicinal plants, molecular mechanism and genetic basis of Dao-di Herbs, and tissue culture and molecular breeding in medicinal plants. The research on pharmacognosy by molecular have achieved remarkable progress in recent 20 years, and have broad development prospects. Copyright© by the Chinese Pharmaceutical Association.

  14. Biotechnology for renewable chemicals

    DEFF Research Database (Denmark)

    Borodina, Irina; Kildegaard, Kanchana Rueksomtawin; Jensen, Niels Bjerg

    2014-01-01

    The majority of the industrial organic chemicals are derived from fossil sources. With the oil and gas resources becoming limiting, biotechnology offers a sustainable alternative for production ofchemicals from renewable feedstocks. Yeast is an attractive cell factory forsustainable production...... for the production of non-native 3-hydroxypropionic acid (3HP).3HP can be chemically dehydrated into acrylic acid and thus can serve as a biosustainable building block for acrylate-based products (diapers, acrylic paints, acrylic polymers, etc.)...

  15. Biotechnology in maize breeding

    Directory of Open Access Journals (Sweden)

    Mladenović-Drinić Snežana

    2004-01-01

    Full Text Available Maize is one of the most important economic crops and the best studied and most tractable genetic system among monocots. The development of biotechnology has led to a great increase in our knowledge of maize genetics and understanding of the structure and behaviour of maize genomes. Conventional breeding practices can now be complemented by a number of new and powerful techniques. Some of these often referred to as molecular methods, enable scientists to see the layout of the entire genome of any organism and to select plants with preferred characteristics by "reading" at the molecular level, saving precious time and resources. DNA markers have provided valuable tools in various analyses ranging from phylogenetic analysis to the positional cloning of genes. Application of molecular markers for genetic studies of maize include: assessment of genetic variability and characterization of germ plasm, identification and fingerprinting of genotypes, estimation of genetic distance, detection of monogamic and quantitative trait loci, marker assisted selection, identification of sequence of useful candidate genes, etc. The development of high-density molecular maps which has been facilitated by PCR-based markers, have made the mapping and tagging of almost any trait possible and serve as bases for marker assisted selection. Sequencing of maize genomes would help to elucidate gene function, gene regulation and their expression. Modern biotechnology also includes an array of tools for introducing or deieting a particular gene or genes to produce plants with novel traits. Development of informatics and biotechnology are resulted in bioinformatic as well as in expansion of microarrey technique. Modern biotechnologies could complement and improve the efficiency of traditional selection and breeding techniques to enhance agricultural productivity.

  16. BIOTECHNOLOGY BIOPRODUCTS "HEALING-1"

    Directory of Open Access Journals (Sweden)

    S. I. Artiukhova

    2014-01-01

    Full Text Available Summary. The article presents data on the development of technology and qualitative research, bio-products «Healing-1». One of the promising directions in food biotechnology is the development of new integrated starter-based consortia of microorganisms, which have higher activity compared with cultures prepared using pure cultures. So it was interesting studies on the development of new biotechnology and bio-based microbial consortium of lactic acid bacteria. Based on the analysis of biotechnological properties of native cultures created a new consortium of microorganisms containing lactic acid streptococci and bacilli, allowing the maximum extent possible to implement the physiological, biochemical and technological potential of microorganisms. Scientifically substantiated and experimentally developed a new biotechnology production of bioproducts «Healing-1», obtained on the basis of microbial consortium with broad spectrum antimicrobial activity. Experimentally investigated quality parameters of organic food «Healing-1» using a new microbial consortium as freshly prepared and during storage. Found that antagonistic activity of microflora bio «Healing-1» with respect to pathogenic and conditionally pathogenic bacteria, as well as its resistance to substances in the gastrointestinal tract of man is more pronounced compared to bioproducts obtained using a separate starter, members of the microbial consortium. It should be noted a more pronounced synthesis of exopolysaccharides in bioproduct «Healing-1», which leads to increased viscosity of the system and improves the consistency of bio. New bioproducts have good organoleptic characteristics and contain a high number of viable cells of lactic acid bacteria. High stability and survival of lactic acid bacteria during storage. In the study of attacked proteins bioproducts digestive proteinases «in vitro» found that the fermentation of milk microbial consortium increases the digestibility

  17. Practicing environmental biotechnology

    Directory of Open Access Journals (Sweden)

    Bruce E.Rittmann

    2014-02-01

    Full Text Available Environmental biotechnology involves ″managing microbial communities to provide services to society″.Its success comes from partnering with prokaryotic microorganisms,whose wideranging metabolic capabilities can be harnessed to destroy pollutants and to generate renewable materials.Partnering with microorganisms requires that we understand them well,and important advances in molecular microbial ecology,analytical chemistry,and mathematical modeling are making it possible to look inside the black box of microbial communities.Also crucial is translating the understanding to biotechnological processes that ″work for the microorganisms so that they work for us″.Successful translation demands novel reactor designs,application of advanced materials,and partnering with practitioners and users.The Swette Center for Environmental Biotechnology,founded in at Arizona State University in 2005,brings together the science and engineering tools in an interdisciplinary environment.The Center emphasizes teamwork and collaborations with research and practice partners around the world.Three new technologies illustrate how the Center applies these principles to ″work for the microorganisms″:the H2-based membrane biofilm reactor (MBfR for reducing many oxidized contaminants in water,the microbial electrochemical cells (MXCs for converting organic wastes into renewable products,and Intimately Coupled PhotoBioCatalysis (ICPBC to detoxify very difficult to biodegrade organic pollutants.

  18. Biotechnology's foreign policy.

    Science.gov (United States)

    Feldbaum, Carl

    2002-01-01

    From its inception, biotechnology has been a uniquely international enterprise. An American and an Englishman working together elucidated the structure of DNA almost 50 years ago; more recently, the Human Genome Project linked researchers around the world, from the Baylor College of Medicine in Houston to the Beijing Human Genome Center. Today our industry's researchers hail from African villages and Manhattan high rises; from Munich and Melbourne; from London, Ontario, and London, England; from Scotland and Nova Scotia--New Scotland; from Calcutta and Calgary. But in the beginning, the infrastructure that supported these efforts--intellectual property, venture capital, streamlined technology transfer--was less widely dispersed and the world's brightest biotech researchers clustered in only half a dozen scientific Meccas. Previous technological revolutions have spread around the world. Following in their footsteps, biotechnology's global diaspora seems inevitable, especially since governments are promoting it. But as our science and business emigrate from early strongholds in the United States, Canada and Europe across oceans and borders and into new cultures, international tensions over biotechnology continue to grow. In just the last few years, controversies have rolled over R&D spending priorities, genetic patents, bioprospecting, transgenic agriculture and drug pricing. My premise today is that our industry needs to formulate its first foreign policy, one which is cognizant of the miserable judgments and mistakes of other industries--and avoids them.

  19. Biotechnology in soybean breeding

    Directory of Open Access Journals (Sweden)

    Sudarić Aleksandra

    2010-01-01

    Full Text Available Biotechnology can be defined broadly as a set of tools that allows scientists to genetically characterize or improve living organisms. Several emerging technologies, such as molecular characterization and genetic transformation, are already being used extensively for the purpose of plant improvement. Other emerging sciences, including genomics and proteomics, are also starting to impact plant improvement. Tools provided by biotechnology will not replace classical breeding methods, but rather will help provide new discoveries and contribute to improved nutritional value and yield enhancement through greater resistance to disease, herbicides and abiotic factors. In soybeans, biotechnology has and will continue to play a valuable role in public and private soybean breeding programs. Based on the availability and combination of conventional and molecular technologies, a substantial increase in the rate of genetic gain for economically important soybean traits can be predicted in the next decade. In this paper, a short review of technologies for molecular markers analysis in soybean is given as well as achievements in the area of genetic transformation in soybean.

  20. Database Description - Trypanosomes Database | LSDB Archive [Life Science Database Archive metadata

    Lifescience Database Archive (English)

    Full Text Available List Contact us Trypanosomes Database Database Description General information of database Database name Trypanosomes Database...stitute of Genetics Research Organization of Information and Systems Yata 1111, Mishima, Shizuoka 411-8540, JAPAN E mail: Database... classification Protein sequence databases Organism Taxonom...y Name: Trypanosoma Taxonomy ID: 5690 Taxonomy Name: Homo sapiens Taxonomy ID: 9606 Database description The Trypanosomes database... is a database providing the comprehensive information of proteins that is effective t

  1. Basic Information - NBDC NikkajiRDF | LSDB Archive [Life Science Database Archive metadata

    Lifescience Database Archive (English)

    Full Text Available switchLanguage; BLAST Search Image Search Home About Archive Update History Data ...-02-001.V006 No Update V5 10.18908/lsdba.nbdc01530-02-001.V005 Update History V4 10.18908/lsdba.nbdc01530-02-001.V004 Update History... V3 10.18908/lsdba.nbdc01530-02-001.V003 Update History V...2 10.18908/lsdba.nbdc01530-02-001.V002 Update History V1 10.18908/lsdba.nbdc01530-02-001.V001 - Description ...s 132,659,413 triples - About This Database Database Description Download License Update History of This Dat

  2. Plant rDNA database: ribosomal DNA loci information goes online

    Czech Academy of Sciences Publication Activity Database

    Garcia, S.; Garnatje, T.; Kovařík, Aleš

    2012-01-01

    Roč. 121, č. 4 (2012), s. 389-394 ISSN 0009-5915 R&D Projects: GA ČR(CZ) GAP501/10/0208; GA ČR GBP501/12/G090 Institutional research plan: CEZ:AV0Z50040702 Keywords : rDNA loci * FISH * database Subject RIV: BO - Biophysics Impact factor: 3.340, year: 2012

  3. Construction Biotechnology: a new area of biotechnological research and applications.

    Science.gov (United States)

    Stabnikov, Viktor; Ivanov, Volodymyr; Chu, Jian

    2015-09-01

    A new scientific and engineering discipline, Construction Biotechnology, is developing exponentially during the last decade. The major directions of this discipline are selection of microorganisms and development of the microbially-mediated construction processes and biotechnologies for the production of construction biomaterials. The products of construction biotechnologies are low cost, sustainable, and environmentally friendly microbial biocements and biogrouts for the construction ground improvement. The microbial polysaccharides are used as admixtures for cement. Microbially produced biodegradable bioplastics can be used for the temporarily constructions. The bioagents that are used in construction biotechnologies are either pure or enrichment cultures of microorganisms or activated indigenous microorganisms of soil. The applications of microorganisms in the construction processes are bioaggregation, biocementation, bioclogging, and biodesaturation of soil. The biotechnologically produced construction materials and the microbially-mediated construction technologies have a lot of advantages in comparison with the conventional construction materials and processes. Proper practical implementations of construction biotechnologies could give significant economic and environmental benefits.

  4. Biotechnology worldwide and the 'European Biotechnology Thematic Network' Association (EBTNA).

    Science.gov (United States)

    Bruschi, F; Dundar, M; Gahan, P B; Gartland, K; Szente, M; Viola-Magni, M P; Akbarova, Y

    2011-09-01

    The European Biotechnology Congress 2011 held under the auspices of the European Biotechnology Thematic Network Association (EBTNA) in conjunction with the Turkish Medical Genetics Association brings together a broad spectrum of biotechnologists from around the world. The subsequent abstracts indicate the manner in which biotechnology has permeated all aspects of research from the basic sciences through to small and medium enterprises and major industries. The brief statements before the presentation of the abstracts aim to introduce not only Biotechnology in general and its importance around the world, but also the European Biotechnology Thematic Network Association and its aims especially within the framework of education and ethics in biotechnology. Copyright © 2011 Elsevier Ltd. All rights reserved.

  5. "Othering" agricultural biotechnology: Slovenian media representation of agricultural biotechnology.

    Science.gov (United States)

    Zajc, Jožica; Erjavec, Karmen

    2014-08-01

    While studies on media representations of agricultural biotechnology mostly analyse media texts, this work is intended to fill a research gap with an analysis of journalistic interpretations of media representations. The purpose of this project was to determine how news media represent agricultural biotechnology and how journalists interpret their own representations. A content and critical discourse analysis of news texts published in the Slovenian media over two years and in-depth interviews with their authors were conducted. News texts results suggest that most of the news posts were "othering" biotechnology and biotechnologists: biotechnology as a science and individual scientists are represented as "they," who are socially irresponsible, ignorant, arrogant, and "our" enemies who produce unnatural processes and work for biotechnology companies, whose greed is destroying people, animals, and the environment. Most journalists consider these representations to be objective because they have published the biotechnologists' opinions, despite their own negative attitudes towards biotechnology.

  6. Biotechnology: reality or dream

    Directory of Open Access Journals (Sweden)

    Konstantinov Kosana

    2002-01-01

    Full Text Available The development of molecular biology and molecular genetics, especially of the recombinant DNA technology enabled improvement of experimental methods that provide manipulation within a cell-free system, such as cell and tissue cultures. Such methods resulted in the development of different new technologies with specific properties in relation to the conventional definitions. According to PERSLEY and lantin (2000 the following components are essential for the contemporary biotechnology: (i genomics - a molecular characterization of all genes and gene products of an organism (ii bioinformatics - the assembly of data from genomic analysis into accessible forms; (iii transformation - the introduction of genes controlling a trait of interest into a genome of a desired organism (micro organisms, plants, animal systems. By the application of cotemporary biotechnology new methods in the field of diagnostic are developed such as rapid and more accurate identification of the presence and absence of genes in the genome of the organism of interest (identification of pathogens prenatal diagnostics, molecular markers assisted breeding for plants, etc. The traits of an organism are determined by its genetic material, i.e. by a molecule of deoxyribonucleic acid (DNA. watson and crick (1953 were the first scientists to describe the structure of DNA as a double-stranded helix. Higher organisms contain a set of linear DNA molecules - chromosomes and a full set of chromosomes of an organism is a genome. Each genome is divided into a series of functional units, i.e. genes. The traits of an organism depend on genes, but their expression depends not only on genes but also on many other factors, including whether a gene, controlling the trait, expresses, specific cells in which it expresses and specially the mode by which the gene and its product interact with the environment. A special aspect within the application of biotechnology occurs as an interaction of a

  7. Global catalogue of microorganisms (gcm): a comprehensive database and information retrieval, analysis, and visualization system for microbial resources

    Science.gov (United States)

    2013-01-01

    Background Throughout the long history of industrial and academic research, many microbes have been isolated, characterized and preserved (whenever possible) in culture collections. With the steady accumulation in observational data of biodiversity as well as microbial sequencing data, bio-resource centers have to function as data and information repositories to serve academia, industry, and regulators on behalf of and for the general public. Hence, the World Data Centre for Microorganisms (WDCM) started to take its responsibility for constructing an effective information environment that would promote and sustain microbial research data activities, and bridge the gaps currently present within and outside the microbiology communities. Description Strain catalogue information was collected from collections by online submission. We developed tools for automatic extraction of strain numbers and species names from various sources, including Genbank, Pubmed, and SwissProt. These new tools connect strain catalogue information with the corresponding nucleotide and protein sequences, as well as to genome sequence and references citing a particular strain. All information has been processed and compiled in order to create a comprehensive database of microbial resources, and was named Global Catalogue of Microorganisms (GCM). The current version of GCM contains information of over 273,933 strains, which includes 43,436bacterial, fungal and archaea species from 52 collections in 25 countries and regions. A number of online analysis and statistical tools have been integrated, together with advanced search functions, which should greatly facilitate the exploration of the content of GCM. Conclusion A comprehensive dynamic database of microbial resources has been created, which unveils the resources preserved in culture collections especially for those whose informatics infrastructures are still under development, which should foster cumulative research, facilitating the

  8. Global catalogue of microorganisms (gcm): a comprehensive database and information retrieval, analysis, and visualization system for microbial resources.

    Science.gov (United States)

    Wu, Linhuan; Sun, Qinglan; Sugawara, Hideaki; Yang, Song; Zhou, Yuguang; McCluskey, Kevin; Vasilenko, Alexander; Suzuki, Ken-Ichiro; Ohkuma, Moriya; Lee, Yeonhee; Robert, Vincent; Ingsriswang, Supawadee; Guissart, François; Philippe, Desmeth; Ma, Juncai

    2013-12-30

    Throughout the long history of industrial and academic research, many microbes have been isolated, characterized and preserved (whenever possible) in culture collections. With the steady accumulation in observational data of biodiversity as well as microbial sequencing data, bio-resource centers have to function as data and information repositories to serve academia, industry, and regulators on behalf of and for the general public. Hence, the World Data Centre for Microorganisms (WDCM) started to take its responsibility for constructing an effective information environment that would promote and sustain microbial research data activities, and bridge the gaps currently present within and outside the microbiology communities. Strain catalogue information was collected from collections by online submission. We developed tools for automatic extraction of strain numbers and species names from various sources, including Genbank, Pubmed, and SwissProt. These new tools connect strain catalogue information with the corresponding nucleotide and protein sequences, as well as to genome sequence and references citing a particular strain. All information has been processed and compiled in order to create a comprehensive database of microbial resources, and was named Global Catalogue of Microorganisms (GCM). The current version of GCM contains information of over 273,933 strains, which includes 43,436 bacterial, fungal and archaea species from 52 collections in 25 countries and regions.A number of online analysis and statistical tools have been integrated, together with advanced search functions, which should greatly facilitate the exploration of the content of GCM. A comprehensive dynamic database of microbial resources has been created, which unveils the resources preserved in culture collections especially for those whose informatics infrastructures are still under development, which should foster cumulative research, facilitating the activities of microbiologists world

  9. Opportunities for energy conservation through biotechnology

    Energy Technology Data Exchange (ETDEWEB)

    Young, J.K.; Griffin, E.A.; Russell, J.A.

    1984-11-01

    The purpose of this study is to identify and quantify potential energy savings available through the development and application of biotechnologies. This information is required in support of ECUT research planning efforts as an aid in identifying promising areas needing further consideration and development. It is also intended as background information for a companion ECUT study being conducted by the National Academy of Science to evaluate the use of bioprocessing methods to conserve energy. Several studies have been conducted recently to assess the status and implications of the development of biotechnology. The Office of Technology Assessment (OTA) considered institutional, economic, and scientific problems and barriers. The National Science Foundation sponsored a study to examine regulatory needs for this new and expanding technology. Somewhat in contrast to these studies, this report covers principally the technical issues. It should be emphasized that the practicality of many developments in biotechnology is not evaluated solely on the basis of energy considerations. Bioprocesses must often compete with well-established coal, petroleum, and natural gas technologies. A complete evaluation of the technical, economical, and ecological impacts of the large-scale applications discussed in this report is not possible within the scope of this study. Instead, this report assesses the potential of biotechnology to save energy so that research into all aspects of implementation will be stimulated for those industries with significant energy savings potential. 92 references, 6 figures, 24 tables.

  10. Biotechnology and Consumer Decision-Making.

    Science.gov (United States)

    Sax, Joanna K

    Society is facing major challenges in climate change, health care and overall quality of life. Scientific advances to address these areas continue to grow, with overwhelming evidence that the application of highly tested forms of biotechnology is safe and effective. Despite scientific consensus in these areas, consumers appear reluctant to support their use. Research that helps to understand consumer decision-making and the public’s resistance to biotechnologies such as vaccines, fluoridated water programs and genetically engineered food, will provide great social value. This article is forward-thinking in that it suggests that important research in behavioral decision-making, specifically affect and ambiguity, can be used to help consumers make informed choices about major applications of biotechnology. This article highlights some of the most controversial examples: vaccinations, genetically engineered food, rbST treated dairy cows, fluoridated water, and embryonic stem cell research. In many of these areas, consumers perceive the risks as high, but the experts calculate the risks as low. Four major thematic approaches are proposed to create a roadmap for policymakers to consider for policy design and implementation in controversial areas of biotechnology. This article articulates future directions for studies that implement decision-making research to allow consumers to appropriately assign risk to their options and make informed decisions.

  11. How Japanese students reason about agricultural biotechnology.

    Science.gov (United States)

    Maekawa, Fumi; Macer, Darryl

    2004-10-01

    Many have claimed that education of the ethical issues raised by biotechnology is essential in universities, but there is little knowledge of its effectiveness. The focus of this paper is to investigate how university students assess the information given in class to make their own value judgments and decisions relating to issues of agricultural biotechnology, especially over genetically modified organisms (GMOs). Analysis of homework reports related with agricultural biotechnology after identification of key concepts and ideas in each student report is presented. The ideas were sorted into different categories. The ideas were compared with those in the reading materials using the same categories. These categories included: concern about affects on humans, affects on the environment, developing countries and starvation, trust in industry, responsibility of scientists, risk perception, media influence, need for (international) organizations or third parties, and information dissemination. What was consistent through the different years was that more than half of the students took a "neutral" position. A report was scored as "neutral" when the report included both the positive and negative side of an issue, or when the student could not make a definite decision about the use of GMOs and GM food. While it may be more difficult to defend a strong ''for" or "against" position, some students used logical arguments successfully in doing so. Sample comments are presented to depict how Japanese students see agricultural technology, and how they value its application, with comparisons to the general social attitudes towards biotechnology.

  12. Accuracy of a probabilistic record-linkage methodology used to track blood donors in the Mortality Information System database.

    Science.gov (United States)

    Capuani, Ligia; Bierrenbach, Ana Luiza; Abreu, Fatima; Takecian, Pedro Losco; Ferreira, João Eduardo; Sabino, Ester Cerdeira

    2014-08-01

    The probabilistic record linkage (PRL) is based on a likelihood score that measures the degree of similarity of several matching variables. Screening test results for different diseases are available for the blood donor population. In this paper, we describe the accuracy of a PRL process used to track blood donors from the Fundação Pró-Sangue (FPS) in the Mortality Information System (SIM), in order that future studies might determine the blood donor's cause of death. The databases used for linkage were SIM and the database made up of individuals that were living (200 blood donors in 2007) and dead (196 from the Hospital das Clinicas de São Paulo that died in 2001-2005). The method consists of cleaning and linking the databases using three blocking steps comparing the variables "Name/Mother's Name/ Date of Birth" to determine a cut-off score. For a cut-off score of 7.06, the sensitivity and specificity of the method is 94.4% (95%CI: 90.0-97.0) and 100% (95%CI: 98.0-100.0), respectively. This method can be used in studies that aim to track blood donors from the FPS database in SIM.

  13. A national look at carbon capture and storage-National carbon sequestration database and geographical information system (NatCarb)

    Science.gov (United States)

    Carr, T.R.; Iqbal, A.; Callaghan, N.; ,; Look, K.; Saving, S.; Nelson, K.

    2009-01-01

    The US Department of Energy's Regional Carbon Sequestration Partnerships (RCSPs) are responsible for generating geospatial data for the maps displayed in the Carbon Sequestration Atlas of the United States and Canada. Key geospatial data (carbon sources, potential storage sites, transportation, land use, etc.) are required for the Atlas, and for efficient implementation of carbon sequestration on a national and regional scale. The National Carbon Sequestration Database and Geographical Information System (NatCarb) is a relational database and geographic information system (GIS) that integrates carbon storage data generated and maintained by the RCSPs and various other sources. The purpose of NatCarb is to provide a national view of the carbon capture and storage potential in the U.S. and Canada. The digital spatial database allows users to estimate the amount of CO2 emitted by sources (such as power plants, refineries and other fossil-fuel-consuming industries) in relation to geologic formations that can provide safe, secure storage sites over long periods of time. The NatCarb project is working to provide all stakeholders with improved online tools for the display and analysis of CO2 carbon capture and storage data. NatCarb is organizing and enhancing the critical information about CO2 sources and developing the technology needed to access, query, model, analyze, display, and distribute natural resource data related to carbon management. Data are generated, maintained and enhanced locally at the RCSP level, or at specialized data warehouses, and assembled, accessed, and analyzed in real-time through a single geoportal. NatCarb is a functional demonstration of distributed data-management systems that cross the boundaries between institutions and geographic areas. It forms the first step toward a functioning National Carbon Cyberinfrastructure (NCCI). NatCarb provides access to first-order information to evaluate the costs, economic potential and societal issues of

  14. USAID Anticorruption Projects Database

    Data.gov (United States)

    US Agency for International Development — The Anticorruption Projects Database (Database) includes information about USAID projects with anticorruption interventions implemented worldwide between 2007 and...

  15. Database Description - RED | LSDB Archive [Life Science Database Archive metadata

    Lifescience Database Archive (English)

    Full Text Available List Contact us RED Database Description General information of database Database name RED Alternative name Rice Expression Database...enome Research Unit Shoshi Kikuchi E-mail : Database classification Plant databases - Rice Database classifi...cation Microarray, Gene Expression Organism Taxonomy Name: Oryza sativa Taxonomy ID: 4530 Database descripti...on The Rice Expression Database (RED) is a database that aggregates the gene expr...icroarray Project and other research groups. Features and manner of utilization of database

  16. Biotechnology and bioforensics new trends

    CERN Document Server

    Kumar, Amit

    2015-01-01

    This Brief covers broad areas of Applied Biology specifically into the domains of Biotechnology/Biomedicine and Forensic Science. Chapters included here would also explain the role of bioinformatics in protein and gene characterization, modeling of the protein structure, survey related to the chromosomal effect on Human Disorders like Diabetes and Cardiac Problems. This Brief is full of Innovative Literature like Use of Microbes in Electricity Production, Brain connection to Type 2 Diabetes etc. Interesting issues in Forensic biology and the aspects of Bioforensics like STR profiling of exhumed bones makes this brief truly useful and informative for Researchers. It also includes the advancements and new ideologies in understanding crop improvements & crop quality. This Brief witnesses Innovative Research related to the Bio and Agri software development too which are capable of accelerating Insilico biological data analysis.

  17. NCBI GEO: mining tens of millions of expression profiles?database and tools update

    OpenAIRE

    Barrett, Tanya; Troup, Dennis B.; Wilhite, Stephen E.; Ledoux, Pierre; Rudnev, Dmitry; Evangelista, Carlos; Kim, Irene F.; Soboleva, Alexandra; Tomashevsky, Maxim; Edgar, Ron

    2006-01-01

    The Gene Expression Omnibus (GEO) repository at the National Center for Biotechnology Information (NCBI) archives and freely disseminates microarray and other forms of high-throughput data generated by the scientific community. The database has a minimum information about a microarray experiment (MIAME)-compliant infrastructure that captures fully annotated raw and processed data. Several data deposit options and formats are supported, including web forms, spreadsheets, XML and Simple Omnibus...

  18. The 2016 database issue of Nucleic Acids Research and an updated molecular biology database collection

    Science.gov (United States)

    Rigden, Daniel J.; Fernández-Suárez, Xosé M.; Galperin, Michael Y.

    2016-01-01

    The 2016 Database Issue of Nucleic Acids Research starts with overviews of the resources provided by three major bioinformatics centers, the U.S. National Center for Biotechnology Information (NCBI), the European Bioinformatics Institute (EMBL-EBI) and Swiss Institute for Bioinformatics (SIB). Also included are descriptions of 62 new databases and updates on 95 databases that have been previously featured in NAR plus 17 previously described elsewhere. A number of papers in this issue deal with resources on nucleic acids, including various kinds of non-coding RNAs and their interactions, molecular dynamics simulations of nucleic acid structure, and two databases of super-enhancers. The protein database section features important updates on the EBI's Pfam, PDBe and PRIDE databases, as well as a variety of resources on pathways, metabolomics and metabolic modeling. This issue also includes updates on popular metagenomics resources, such as MG-RAST, EBI Metagenomics, and probeBASE, as well as a newly compiled Human Pan-Microbe Communities database. A significant fraction of the new and updated databases are dedicated to the genetic basis of disease, primarily cancer, and various aspects of drug research, including resources for patented drugs, their side effects, withdrawn drugs, and potential drug targets. A further six papers present updated databases of various antimicrobial and anticancer peptides. The entire Database Issue is freely available online on the Nucleic Acids Research website (http://nar.oxfordjournals.org/). The NAR online Molecular Biology Database Collection, http://www.oxfordjournals.org/nar/database/c/, has been updated with the addition of 88 new resources and removal of 23 obsolete websites, which brought the current listing to 1685 databases. PMID:26740669

  19. Databases and Geographical Information Systems at the research/teaching interface: palaeoclimate proxies, freshwater biodiversity and the OMEGA project

    Science.gov (United States)

    Horne, David

    2013-04-01

    The Mutual Ostracod Temperature Range (MOTR) method provides Quaternary palaeotemperature range estimates based on fossil ostracod assemblages calibrated using modern distributional databases and climate data. Over the past five years, aspects of the development and application of the MOTR method have been incorporated into undergraduate teaching in two second-year modules (Global Environmental Change and Digital Worlds: Cartography, Geographical Information Systems and Modelling) via lectures and practical exercises. Consequently, several students became sufficiently interested and enthused to undertake successful major projects aimed at developing, testing and applying aspects of the method, leading in turn to postgraduate work on the same topic in two cases and in a third case to co-authorship of a research publication. Thus both research and teaching have benefited from the integration of an innovative geoscience application with undergraduate coursework. The scope of MOTR applications is being expanded from European to global via the Ostracod Metadatabase of Environmental and Geographical Attributes (OMEGA) project; the current focus is on harmonising North American and European datasets, supported by the EU-funded (FP7) BioFresh project which is building a global information platform with access to all available databases of freshwater biodiversity. Undergraduate participation will be sought to underpin a Citizen Science initiative aimed at checking, correcting and validating the geographic referencing of species' records in the databases, using datasets exported as Keyhole Markup Language files for use in Google Earth.

  20. Dynamic Database. Efficiently Convert Massive Quantities of Sensor Data into Actionable Information for Tactical Commanders

    National Research Council Canada - National Science Library

    Kessler, Otto

    2000-01-01

    As the number of sensors, platforms, exploitation sites, and command and control nodes continues to grow in response to Joint Vision 2010 information dominance requirements, Commanders and analysts...

  1. BIOTECHNOLOGY IN FRUIT GROWING

    Directory of Open Access Journals (Sweden)

    Z. Jurković

    2008-09-01

    Full Text Available Research studies in the area of biotechnologies in fruit growing started at the Agricultural Institute Osijek in 2006 with the establishment of the first experimental in vitro laboratory for micropropagation. The laboratory started an active research related to the Project "Biotechnological methods in fruit tree identification, selection and propagation" Project is part of program "Preservation and revitalization of grape and fruit autochthonous cultivars". The goal of this research is to determine genetic differences between autochthonous and introduced cultivars of cherry as well as cultivars and types of sour cherry, to find and optimize a method for fast recovery of clonal material. A great number of cherry cultivars and types within the population of cv. Oblacinska sour cherry exists in Croatia. A survey with the purpose of selecting autochthonous cultivars for further selection has been done in previous research. Differences have been found in a number of important agronomic traits within the populations of cv. Oblačinska sour cherry. Autochthonous cherry cultivars are suspected to be synonyms of known old cultivars which were introduced randomly and have been naturalized under a local name. Identification and description of cultivars and types of fruits is based on special visible properties which were measurable or notable. In this approach difficulties arise from the effect of non-genetic factors on expression of certain traits. Genetic-physiological problem of S allele autoincompatibility exists within cherry cultivars. Therefore it is necessary to put different cultivars in the plantation to pollinate each other. Apart form the fast and certain sort identification independent of environmental factors, biotechnological methods based on PCR enable faster virus detection compared with classical serologic methods and indexing and cover a wider range of plant pathogens including those undetectable by other methods. Thermotherapy and

  2. International Computer and Information Literacy Study: ICILS 2013 User Guide for the International Database

    Science.gov (United States)

    Jung, Michael, Ed.; Carstens, Ralph, Ed.

    2015-01-01

    The International Computer and Information Literacy Study (ICILS) 2013, conducted by the International Association for the Evaluation of Educational Achievement (IEA), studied how students in different countries develop the knowledge, understanding, attitudes, dispositions, and skills that comprise computer and information literacy (CIL). The aim…

  3. Using Patent Classification to Discover Chemical Information in a Free Patent Database: Challenges and Opportunities

    Science.gov (United States)

    Ha¨rtinger, Stefan; Clarke, Nigel

    2016-01-01

    Developing skills for searching the patent literature is an essential element of chemical information literacy programs at the university level. The present article creates awareness of patents as a rich source of chemical information. Patent classification is introduced as a key-component in comprehensive search strategies. The free Espacenet…

  4. Information Retrieval Strategies of Millennial Undergraduate Students in Web and Library Database Searches

    Science.gov (United States)

    Porter, Brandi

    2009-01-01

    Millennial students make up a large portion of undergraduate students attending colleges and universities, and they have a variety of online resources available to them to complete academically related information searches, primarily Web based and library-based online information retrieval systems. The content, ease of use, and required search…

  5. A Survey of Data-Base Information Systems Relevant to Navy Requirements Planning

    Science.gov (United States)

    1983-02-01

    Akman Associates, Inc. Applicability of existing Navy information systems and models to Hardman information system development. Silver Spring, MD...Portions of this section has been extracted from documentation prepared by Akman Associates, Inc. (1980). E-4 Table E-1 Sample NAMPS Report

  6. Genes (including RNA editing information) - RMG | LSDB Archive [Life Science Database Archive metadata

    Lifescience Database Archive (English)

    Full Text Available switchLanguage; BLAST Search Image Search Home About Archive Update History Data List Contact us RMG Genes... (including RNA editing information) Data detail Data name Genes (including RNA edi... Site Policy | Contact Us Genes (including RNA editing information) - RMG | LSDB Archive ...

  7. Tailored patient information using a database system: Increasing patient compliance in a day surgery setting

    DEFF Research Database (Denmark)

    Grode, Jesper Nicolai Riis; Grode, Louise; Steinsøe, Ulla

    to the type of anaesthetics, surgery, fasting regimes, etc., for each patient scenario. The material must have a professional look and should be provided in a language native to the patient. Finally it is a requirement to document what information material has been handed out. A 3-tier software architecture....../media (word processing engines, web, mobile apps, and information kiosks). To lower the adoption bar of the system, an MS Word user interface was integrated with the web service layer, and information can now quickly be categorised and grouped according to purpose of use, users can quickly setup information...... letter templates, generate information material based on existing templates and support translation of content. Statistics on compliance taken prior to system introduction will be compared to post-system introduction statistics to confirm that the novelty of the system efficiently supports...

  8. Performance Improvement with Web Based Database on Library Information System of Smk Yadika 5

    Directory of Open Access Journals (Sweden)

    Pualam Dipa Nusantara

    2015-12-01

    Full Text Available The difficulty in managing the data of books collection in the library is a problem that is often faced by the librarian that effect the quality of service. Arrangement and recording a collection of books in the file system of separate applications Word and Excel, as well as transaction handling borrowing and returning books, therehas been no integrated records. Library system can manage the book collection. This system can reduce the problems often experienced by library staff when serving students in borrowing books. There so frequent difficulty in managing the books that still in borrowed state. This system will also record a collection of late fees or lost library conducted by students (borrowers. The conclusion of this study is library performance can be better with the library system using web database.

  9. Industrial use of Biotechnology in Agriculture

    International Nuclear Information System (INIS)

    But, S.J.

    2006-01-01

    In the past the biological research was restricted within the boundary of laboratories and the subsequent results were often employed merely to strengthen the research knowledge and information. In life sciences, the traditional methods took years in proving the biological facts. At the leg of last century, the practical application of biotechnology provided a powerful tool to mankind that has led to a revolutionary change in modern agriculture. In the present era, the economy of agro-based countries all over the world is dependent on the adaptation of the pattern of crop-production and their improvement through modern biotechnological means. Biotechnology is in fact the name of a combination of techniques involved to make the full use of living organisms, either in total or in part, for the benefit of plants, animals or human beings. Progressive and dynamic investors, associated with researches/scientists, should be encouraged to step forward for the mobilization of emerging trend of biotechnological industry in agriculture. Researcher/Scientists of biological programmes in Pakistan should be encouraged at Government level to come forward in contributing their tremendous role to boost Agr- industry in the country. (author)

  10. Information of the markers in each chromosome - RGP caps | LSDB Archive [Life Science Database Archive metadata

    Lifescience Database Archive (English)

    Full Text Available for RFLP linkage analysis, we designed unique primer pairs for the specific amplification of genome. The...List Contact us RGP caps Information of the markers in each chromosome Data detail Data name Information of the... markers in each chromosome DOI 10.18908/lsdba.nbdc00318-05-001 Description of data contents Information of the...le search URL http://togodb.biosciencedbc.jp/togodb/view/rgp_caps_main#en Data acquisition method STS markers : The... 161 STS markers have been developed using clone-specific sequences (3'end) designed from the EST seq

  11. Concepts in Biotechnology An Affordable Overview of Biotechnology ...

    Indian Academy of Sciences (India)

    Home; Journals; Resonance – Journal of Science Education; Volume 2; Issue 9. Concepts in Biotechnology An Affordable Overview of Biotechnology Through Self Study and Open Learning Graduates. Narayan S Punekar. Book Review Volume 2 Issue 9 September 1997 pp 77-78 ...

  12. Development of an Information Database for the Integrated Airline Management System (IAMS

    Directory of Open Access Journals (Sweden)

    Bogdane Ruta

    2017-08-01

    Full Text Available In present conditions the activity of any enterprise is represented as a combination of operational processes. Each of them corresponds to relevant airline management systems. Combining two or more management systems, it is possible to obtain an integrated management system. For the effective functioning of the integrated management system, an appropriate information system should be developed. This article proposes a model of such an information system.

  13. Database, Knowledge and Scientific Networks : The visibility in the Information Society

    Directory of Open Access Journals (Sweden)

    Maria Cristina Cereser Pezzella

    2016-06-01

    Full Text Available The present study aims to analyze the protection provided personal data, voluntarely given by people and collected in files without their consent, an affront to their confidentiality, confidentiality and privacy rights, affecting the right of personality, also fail to materialize the right to privacy in the Information Society. The Information Society, backed the rule of knowledge, creation, circulation and encumbrance information, is embodied in the current form of promotion of personal interrelationships, and the targeting of economic, political, legal and social, causing significant changes in daily life. Indeed, in the information society, the person is primarily represented by information, therefore known for data, numbers, shopping routines and spending, in the form of text, images, sounds and recorded data. This new perception of the individual, as an informational being, shall claim the protection of privacy, especially because it is a fundamental right of first magnitude, recognized as personality right, unavailability of characters, intransferable, inalienable and imprescriptible. The research was mainly based literature, using the national and international doctrine pondering the various branches of legal science, beyond the historical perspective - key to better understanding the complexity in the contemporary context.

  14. Biotechnology Towards Energy Crops.

    Science.gov (United States)

    Margaritopoulou, Theoni; Roka, Loukia; Alexopoulou, Efi; Christou, Myrsini; Rigas, Stamatis; Haralampidis, Kosmas; Milioni, Dimitra

    2016-03-01

    New crops are gradually establishing along with cultivation systems to reduce reliance on depleting fossil fuel reserves and sustain better adaptation to climate change. These biological assets could be efficiently exploited as bioenergy feedstocks. Bioenergy crops are versatile renewable sources with the potential to alternatively contribute on a daily basis towards the coverage of modern society's energy demands. Biotechnology may facilitate the breeding of elite energy crop genotypes, better suited for bio-processing and subsequent use that will improve efficiency, further reduce costs, and enhance the environmental benefits of biofuels. Innovative molecular techniques may improve a broad range of important features including biomass yield, product quality and resistance to biotic factors like pests or microbial diseases or environmental cues such as drought, salinity, freezing injury or heat shock. The current review intends to assess the capacity of biotechnological applications to develop a beneficial bioenergy pipeline extending from feedstock development to sustainable biofuel production and provide examples of the current state of the art on future energy crops.

  15. Forest biotechnology and environment

    Energy Technology Data Exchange (ETDEWEB)

    Kopriva, S.; Rennenberg, H. [Freiburg Univ. (Germany). Inst. fuer Forstbotanik und Baumphysiologie

    2000-02-01

    Forest biotechnology is a relatively young area of applied plant molecular biology that presently concentrates on (i) manipulation of lignin content and composition, (ii) pathogen-, pesticide-, and stress resistance, and (iii) improvement of growth. Transgenic trees have a great potential also in other areas of applied and environmental research, e.g. in the production of phytochemicals and in phytoremediation of polluted soils. To implement the use of biotechnology for these and other purposes improvement of the acceptance in public of genetic engineering general, and the application of transgenic technologies to trees species in particular, is essential. (orig.) [German] Bei der forstlichen Biotechnologie handelt es sich um ein vergleichsweise junges Gebiet der angewandten pflanzlichen Molekularbiologie, das sich derzeit auf folgende Fragestellungen konzentriert: (a) Manipulation des Ligningehalts und der Lignin-Zusammensetzung; (b) Verbesserung der Resistenz gegenueber Pathogenen, Pestiziden und verschiedenen Formen von Stress; (c) Verbesserung des Wachstums. Transgene Baeume haben darueber hinaus ein grosses Potential fuer andere Gebiete der angewandten Forschung und der Umweltforschung, so z.B. fuer die Produktion pflanzlicher Naturstoffe und die Phytosanierung belasteter Boeden. Um die Verwendung biotechnologischer Verfahren fuer diese und andere Zwecke zu implementieren, ist es dringend erforderlich, die Akzeptanz von 'genetic engineering' im allgemeinen und den Einsatz von Technologien zur Herstellung transgener Baeume im besonderen in der Oeffentlichkeit zu verbessern. (orig.)

  16. Djeen (Database for Joomla!'s Extensible Engine): a research information management system for flexible multi-technology project administration.

    Science.gov (United States)

    Stahl, Olivier; Duvergey, Hugo; Guille, Arnaud; Blondin, Fanny; Vecchio, Alexandre Del; Finetti, Pascal; Granjeaud, Samuel; Vigy, Oana; Bidaut, Ghislain

    2013-06-06

    With the advance of post-genomic technologies, the need for tools to manage large scale data in biology becomes more pressing. This involves annotating and storing data securely, as well as granting permissions flexibly with several technologies (all array types, flow cytometry, proteomics) for collaborative work and data sharing. This task is not easily achieved with most systems available today. We developed Djeen (Database for Joomla!'s Extensible Engine), a new Research Information Management System (RIMS) for collaborative projects. Djeen is a user-friendly application, designed to streamline data storage and annotation collaboratively. Its database model, kept simple, is compliant with most technologies and allows storing and managing of heterogeneous data with the same system. Advanced permissions are managed through different roles. Templates allow Minimum Information (MI) compliance. Djeen allows managing project associated with heterogeneous data types while enforcing annotation integrity and minimum information. Projects are managed within a hierarchy and user permissions are finely-grained for each project, user and group.Djeen Component source code (version 1.5.1) and installation documentation are available under CeCILL license from http://sourceforge.net/projects/djeen/files and supplementary material.

  17. Gleaning non-trivial structural, functional and evolutionary information about proteins by iterative database searches.

    Science.gov (United States)

    Aravind, L; Koonin, E V

    1999-04-16

    Using a number of diverse protein families as test cases, we investigate the ability of the recently developed iterative sequence database search method, PSI-BLAST, to identify subtle relationships between proteins that originally have been deemed detectable only at the level of structure-structure comparison. We show that PSI-BLAST can detect many, though not all, of such relationships, but the success critically depends on the optimal choice of the query sequence used to initiate the search. Generally, there is a correlation between the diversity of the sequences detected in the first pass of database screening and the ability of a given query to detect subtle relationships in subsequent iterations. Accordingly, a thorough analysis of protein superfamilies at the sequence level is necessary in order to maximize the chances of gleaning non-trivial structural and functional inferences, as opposed to a single search, initiated, for example, with the sequence of a protein whose structure is available. This strategy is illustrated by several findings, each of which involves an unexpected structural prediction: (i) a number of previously undetected proteins with the HSP70-actin fold are identified, including a highly conserved and nearly ubiquitous family of metal-dependent proteases (typified by bacterial O-sialoglycoprotease) that represent an adaptation of this fold to a new type of enzymatic activity; (ii) we show that, contrary to the previous conclusions, ATP-dependent and NAD-dependent DNA ligases are confidently predicted to possess the same fold; (iii) the C-terminal domain of 3-phosphoglycerate dehydrogenase, which binds serine and is involved in allosteric regulation of the enzyme activity, is shown to typify a new superfamily of ligand-binding, regulatory domains found primarily in enzymes and regulators of amino acid and purine metabolism; (iv) the immunoglobulin-like DNA-binding domain previously identified in the structures of transcription factors

  18. Biotechnology, genetic conservation and sustainable use of ...

    African Journals Online (AJOL)

    ... agriculture, silviculture, horticulture, environment and other important issues. This paper reviews some biotechnological tools that could be harnessed in promoting conservation and sustainable use of bioresources. Key words: Bioresources, genetic conservation, biotechnology. African Journal of Biotechnology Vol. 2 (12) ...

  19. Fostering biotechnology entrepreneurship in developing countries

    African Journals Online (AJOL)

    Fred

    the growing science base, biotechnology companies can successfully be located and thrive in these countries. The rewards which can flow from the successful exploitation of research should encourage investment in biotechnological activities. Key words: Entrepreneur, biotechnology, investment. INTRODUCTION.

  20. Department of Biotechnology | Women in Science | Initiatives ...

    Indian Academy of Sciences (India)

    Department of Biotechnology. Department of Biotechnology Awards; National Woman Bioscientist Awards; Biotech Product & Process Development & Commercialization Awards; Awardees of National Bioscience Awards for Career Development. Department of Biotechnology Awardees. Year: 2012 Innovative Young ...

  1. Database Description - RPD | LSDB Archive [Life Science Database Archive metadata

    Lifescience Database Archive (English)

    Full Text Available List Contact us RPD Database Description General information of database Database name RPD Alternative name Rice Proteome Database...titute of Crop Science, National Agriculture and Food Research Organization Setsuko Komatsu E-mail: Database... classification Proteomics Resources Plant databases - Rice Organism Taxonomy Name: Oryza sativa Taxonomy ID: 4530 Database... description Rice Proteome Database contains information on protei...AGE) reference maps. Features and manner of utilization of database Proteins extracted from organs and subce

  2. Integration of published information into a resistance-associated mutation database for Mycobacterium tuberculosis.

    Science.gov (United States)

    Salamon, Hugh; Yamaguchi, Ken D; Cirillo, Daniela M; Miotto, Paolo; Schito, Marco; Posey, James; Starks, Angela M; Niemann, Stefan; Alland, David; Hanna, Debra; Aviles, Enrique; Perkins, Mark D; Dolinger, David L

    2015-04-01

    Tuberculosis remains a major global public health challenge. Although incidence is decreasing, the proportion of drug-resistant cases is increasing. Technical and operational complexities prevent Mycobacterium tuberculosis drug susceptibility phenotyping in the vast majority of new and retreatment cases. The advent of molecular technologies provides an opportunity to obtain results rapidly as compared to phenotypic culture. However, correlations between genetic mutations and resistance to multiple drugs have not been systematically evaluated. Molecular testing of M. tuberculosis sampled from a typical patient continues to provide a partial picture of drug resistance. A database of phenotypic and genotypic testing results, especially where prospectively collected, could document statistically significant associations and may reveal new, predictive molecular patterns. We examine the feasibility of integrating existing molecular and phenotypic drug susceptibility data to identify associations observed across multiple studies and demonstrate potential for well-integrated M. tuberculosis mutation data to reveal actionable findings. © The Author 2014. Published by Oxford University Press on behalf of the Infectious Diseases Society of America. All rights reserved. For Permissions, please e-mail: journals.permissions@oup.com.

  3. Environmental biotechnology: concepts and applications

    National Research Council Canada - National Science Library

    Winter, Josef; Jördening, Hans-Joachim

    2005-01-01

    ... for the - development of new and environmentally improved production technologies with less purified substrates and generation of fewer by-products - bioproducts as non-toxic matters, mostly recyclable. Some impressive studies on industrial applications of biotechnology are published in two OECD reports, which summarized, that biotechnology has the potential o...

  4. Teachers' Concerns about Biotechnology Education

    Science.gov (United States)

    Borgerding, Lisa A.; Sadler, Troy D.; Koroly, Mary Jo

    2013-01-01

    The impacts of biotechnology are found in nearly all sectors of society from health care and food products to environmental issues and energy sources. Despite the significance of biotechnology within the sciences, it has not become a prominent trend in science education. In this study, we seek to more fully identify biology teachers' concerns…

  5. Preface: Biocatalysis and Agricultural Biotechnology

    Science.gov (United States)

    This book was assembled with the intent of bringing together current advances and in-depth reviews of biocatalysis and agricultural biotechnology with emphasis on bio-based products and agricultural biotechnology. Recent energy and food crises point out the importance of bio-based products from ren...

  6. Biotechnology Outlines for Classroom Use.

    Science.gov (United States)

    Paolella, Mary Jane

    1991-01-01

    Presents a course outline for the study of biotechnology at the high school or college level. The outline includes definitions, a history, and the vocabulary of biotechnology. Presents a science experiment to analyze the effects of restriction enzymes on DNA. (MDH)

  7. Database Description - RMG | LSDB Archive [Life Science Database Archive metadata

    Lifescience Database Archive (English)

    Full Text Available List Contact us RMG Database Description General information of database Database name RMG Alternative name ...raki 305-8602, Japan National Institute of Agrobiological Sciences E-mail : Database... classification Nucleotide Sequence Databases Organism Taxonomy Name: Oryza sativa Japonica Group Taxonomy ID: 39947 Database... description This database contains information on the rice mitochondrial genome. You ca...sis results. Features and manner of utilization of database The mitochondrial genome information can be used

  8. Database dedicated to information published during the Benelux conferences on hormone and veterinary drug residue analyses

    NARCIS (Netherlands)

    Impens, S.; Brabander, H.F. de; Bergwerff, A.A.; Ginkel, L.A. van; Schilt, R.; Stephany, R.W.; Wasch, K. de; Courtheyn, D.; Peteghem, C. van

    2002-01-01

    Every other year scientists working in the field of residue analysis participate the "International Symposium on Hormone and Veterinary Drug Residue Analysis" and "Euroresidue" conferences. In each symposium a lot of innovative information is presented. In order to obtain a retrieval system for this

  9. Integrating Health Information Systems into a Database Course: A Case Study

    Science.gov (United States)

    Anderson, Nicole; Zhang, Mingrui; McMaster, Kirby

    2011-01-01

    Computer Science is a rich field with many growing application areas, such as Health Information Systems. What we suggest here is that multi-disciplinary threads can be introduced to supplement, enhance, and strengthen the primary area of study in a course. We call these supplementary materials "threads," because they are executed…

  10. The Johnson Space Center Management Information Systems (JSCMIS): An interface for organizational databases

    Science.gov (United States)

    Bishop, Peter C.; Erickson, Lloyd

    1990-01-01

    The Management Information and Decision Support Environment (MIDSE) is a research activity to build and test a prototype of a generic human interface on the Johnson Space Center (JSC) Information Network (CIN). The existing interfaces were developed specifically to support operations rather than the type of data which management could use. The diversity of the many interfaces and their relative difficulty discouraged occasional users from attempting to use them for their purposes. The MIDSE activity approached this problem by designing and building an interface to one JSC data base - the personnel statistics tables of the NASA Personnel and Payroll System (NPPS). The interface was designed against the following requirements: generic (use with any relational NOMAD data base); easy to learn (intuitive operations for new users); easy to use (efficient operations for experienced users); self-documenting (help facility which informs users about the data base structure as well as the operation of the interface); and low maintenance (easy configuration to new applications). A prototype interface entitled the JSC Management Information Systems (JSCMIS) was produced. It resides on CIN/PROFS and is available to JSC management who request it. The interface has passed management review and is ready for early use. Three kinds of data are now available: personnel statistics, personnel register, and plan/actual cost.

  11. Society Catalog Information - Society Catalog | LSDB Archive [Life Science Database Archive metadata

    Lifescience Database Archive (English)

    Full Text Available n DOI 10.18908/lsdba.nbdc00963-001 Description of data contents Information of the academic societies in Jap... public site: Paid public site URL Paid public site URL Academic journal: Name Name for the academic

  12. Knowledge and Attitudes Towards Biotechnology of Elementary Education Preservice Teachers: The first Spanish experience

    Science.gov (United States)

    Casanoves, Marina; González, Ángel; Salvadó, Zoel; Haro, Juan; Novo, Maite

    2015-11-01

    Due to the important impact that biotechnology has on current Western societies, well-informed critical citizens are needed. People prepared to make conscious decisions about aspects of biotechnology that relate to their own lives. Teachers play a central role in all education systems. Thus, the biotechnological literacy of preservice teachers is an important consideration as they will become an influential collective as future teachers of the next generation of children. The attitudes toward science (and biotechnology) that teachers have affect their behavior and influence the way they implement their daily practice of science teaching in school. This study analyzes the attitudes and knowledge of Spanish preservice teachers toward biotechnology. We designed a new survey instrument that was completed by 407 university students who were taking official degree programs in preschool and primary education. Our results point out that although they are aware of biotechnology applications, topics concerning the structure of DNA, management of genetic information inside the cell, genetically modified organism technology and the use of microorganisms as biotechnological tools were not correctly answered. According to our attitude analysis, Spanish preservice teachers could be defined as opponents of genetically modified product acquisition, supporters of biotechnology for medical purposes and highly interested in increasing their knowledge about biotechnology and other scientific advances. Our results show a positive correlation between better knowledge and more positive attitudes toward biotechnology. A Spanish preservice teacher with positive attitudes toward biotechnology tends to be a student with a strong biology background who scored good marks in our knowledge test.

  13. Inbred Strain Variant Database (ISVdb: A Repository for Probabilistically Informed Sequence Differences Among the Collaborative Cross Strains and Their Founders

    Directory of Open Access Journals (Sweden)

    Daniel Oreper

    2017-06-01

    Full Text Available The Collaborative Cross (CC is a panel of recently established multiparental recombinant inbred mouse strains. For the CC, as for any multiparental population (MPP, effective experimental design and analysis benefit from detailed knowledge of the genetic differences between strains. Such differences can be directly determined by sequencing, but until now whole-genome sequencing was not publicly available for individual CC strains. An alternative and complementary approach is to infer genetic differences by combining two pieces of information: probabilistic estimates of the CC haplotype mosaic from a custom genotyping array, and probabilistic variant calls from sequencing of the CC founders. The computation for this inference, especially when performed genome-wide, can be intricate and time-consuming, requiring the researcher to generate nontrivial and potentially error-prone scripts. To provide standardized, easy-to-access CC sequence information, we have developed the Inbred Strain Variant Database (ISVdb. The ISVdb provides, for all the exonic variants from the Sanger Institute mouse sequencing dataset, direct sequence information for CC founders and, critically, the imputed sequence information for CC strains. Notably, the ISVdb also: (1 provides predicted variant consequence metadata; (2 allows rapid simulation of F1 populations; and (3 preserves imputation uncertainty, which will allow imputed data to be refined in the future as additional sequencing and genotyping data are collected. The ISVdb information is housed in an SQL database and is easily accessible through a custom online interface (http://isvdb.unc.edu, reducing the analytic burden on any researcher using the CC.

  14. Assembly and comparison of available solar hot water system reliability databases and information.

    Energy Technology Data Exchange (ETDEWEB)

    Menicucci, David F. (Building Specialists, Inc., Albuquerque, NM)

    2009-05-01

    Solar hot water (SHW) systems have been installed commercially for over 30 years, yet few quantitative details are known about their reliability. This report describes a comprehensive analysis of all of the known major previous research and data regarding the reliability of SHW systems and components. Some important conclusions emerged. First, based on a detailed inspection of ten-year-old systems in Florida, about half of active systems can be expected to fail within a ten-year period. Second, valves were identified as the probable cause of a majority of active SHW failures. Third, passive integral and thermosiphon SHW systems have much lower failure rates than active ones, probably due to their simple design that employs few mechanical parts. Fourth, it is probable that the existing data about reliability do not reveal the full extent of fielded system failures because most of the data were based on trouble calls. Often an SHW system owner is not aware of a failure because the backup system silently continues to produce hot water. Thus, a repair event may not be generated in a timely manner, if at all. This final report for the project provides all of the pertinent details about this study, including the source of the data, the techniques to assure their quality before analysis, the organization of the data into perhaps the most comprehensive reliability database in existence, a detailed statistical analysis, and a list of recommendations for additional critical work. Important recommendations include the inclusion of an alarm on SHW systems to identify a failed system, the need for a scientifically designed study to collect high-quality reliability data that will lead to design improvements and lower costs, and accelerated testing of components that are identified as highly problematic.

  15. Egyptian Journal of Biotechnology: Journal Sponsorship

    African Journals Online (AJOL)

    Egyptian Journal of Biotechnology: Journal Sponsorship. Journal Home > About the Journal > Egyptian Journal of Biotechnology: Journal Sponsorship. Log in or Register to get access to full text downloads.

  16. Nigerian Journal of Biotechnology: Journal Sponsorship

    African Journals Online (AJOL)

    Nigerian Journal of Biotechnology: Journal Sponsorship. Journal Home > About the Journal > Nigerian Journal of Biotechnology: Journal Sponsorship. Log in or Register to get access to full text downloads.

  17. The Arabidopsis Information Resource (TAIR): a comprehensive database and web-based information retrieval, analysis, and visualization system for a model plant

    Science.gov (United States)

    Huala, Eva; Dickerman, Allan W.; Garcia-Hernandez, Margarita; Weems, Danforth; Reiser, Leonore; LaFond, Frank; Hanley, David; Kiphart, Donald; Zhuang, Mingzhe; Huang, Wen; Mueller, Lukas A.; Bhattacharyya, Debika; Bhaya, Devaki; Sobral, Bruno W.; Beavis, William; Meinke, David W.; Town, Christopher D.; Somerville, Chris; Rhee, Seung Yon

    2001-01-01

    Arabidopsis thaliana, a small annual plant belonging to the mustard family, is the subject of study by an estimated 7000 researchers around the world. In addition to the large body of genetic, physiological and biochemical data gathered for this plant, it will be the first higher plant genome to be completely sequenced, with completion expected at the end of the year 2000. The sequencing effort has been coordinated by an international collaboration, the Arabidopsis Genome Initiative (AGI). The rationale for intensive investigation of Arabidopsis is that it is an excellent model for higher plants. In order to maximize use of the knowledge gained about this plant, there is a need for a comprehensive database and information retrieval and analysis system that will provide user-friendly access to Arabidopsis information. This paper describes the initial steps we have taken toward realizing these goals in a project called The Arabidopsis Information Resource (TAIR) (www.arabidopsis.org). PMID:11125061

  18. LinkHub: a Semantic Web system that facilitates cross-database queries and information retrieval in proteomics

    Directory of Open Access Journals (Sweden)

    Cheung Kei-Hoi

    2007-05-01

    Full Text Available Abstract Background A key abstraction in representing proteomics knowledge is the notion of unique identifiers for individual entities (e.g. proteins and the massive graph of relationships among them. These relationships are sometimes simple (e.g. synonyms but are often more complex (e.g. one-to-many relationships in protein family membership. Results We have built a software system called LinkHub using Semantic Web RDF that manages the graph of identifier relationships and allows exploration with a variety of interfaces. For efficiency, we also provide relational-database access and translation between the relational and RDF versions. LinkHub is practically useful in creating small, local hubs on common topics and then connecting these to major portals in a federated architecture; we have used LinkHub to establish such a relationship between UniProt and the North East Structural Genomics Consortium. LinkHub also facilitates queries and access to information and documents related to identifiers spread across multiple databases, acting as "connecting glue" between different identifier spaces. We demonstrate this with example queries discovering "interologs" of yeast protein interactions in the worm and exploring the relationship between gene essentiality and pseudogene content. We also show how "protein family based" retrieval of documents can be achieved. LinkHub is available at hub.gersteinlab.org and hub.nesg.org with supplement, database models and full-source code. Conclusion LinkHub leverages Semantic Web standards-based integrated data to provide novel information retrieval to identifier-related documents through relational graph queries, simplifies and manages connections to major hubs such as UniProt, and provides useful interactive and query interfaces for exploring the integrated data.

  19. Informing principal policy reforms in South Africa through data-based evidence

    OpenAIRE

    Gabrielle Wills

    2015-01-01

    In the past decade there has been a notable shift in South African education policy that raises the value of school leadership as a lever for learning improvements. Despite a growing discourse on school leadership, there has been a lack of empirical based evidence on principals to inform, validate or debate the efficacy of proposed policies in raising the calibre of school principals. Drawing on findings from a larger study to understand the labour market for school principals in South Africa...

  20. Scalable Database Design of End-Game Model with Decoupled Countermeasure and Threat Information

    Science.gov (United States)

    2017-11-01

    include Ang Width, Num Frag, Vel at Middle, and Vel at Out Edge , which shall be populated in the table . Approved for public release; distribution...an approach that can consolidate all threat information into one individual table . This investigation began with analyzing existing Excel files...diagrams were iteratively developed followed by implementation of the corresponding relational schemas and table designs. Microsoft Access was adopted to

  1. FLUXNET. Database of fluxes, site characteristics, and flux-community information

    Energy Technology Data Exchange (ETDEWEB)

    Olson, R. J. [Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States); Holladay, S. K. [Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States); Cook, R. B. [Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States); Falge, E. [Univ. Bayreuth, Bayreuth (Germany); Baldocchi, D. [Univ. of California, Berkeley, CA (United States); Gu, L. [Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States)

    2004-02-28

    FLUXNET is a “network of regional networks” created by international scientists to coordinate regional and global analysis of observations from micrometeorological tower sites. The flux tower sites use eddy covariance methods to measure the exchanges of carbon dioxide (CO2), water vapor, and energy between terrestrial ecosystems and the atmosphere. FLUXNET’S goals are to aid in understanding the mechanisms controlling the exchanges of CO2, water vapor, and energy across a range of time (0.5 hours to annual periods) and space scales. FLUXNET provides an infrastructure for the synthesis and analysis of world-wide, long-term flux data compiled from various regional flux networks. Information compiled by the FLUXNET project is being used to validate remote sensing products associated with the National Aeronautics and Space Administration (NASA) Terra and Aqua satellites. FLUXNET provides access to ground information for validating estimates of net primary productivity, and energy absorption that are being generated by the Moderate Resolution Imaging Spectroradiometer (MODIS) sensors. In addition, this information is also used to develop and validate ecosystem models.

  2. The Magnetics Information Consortium (MagIC) Online Database: Uploading, Searching and Visualizing Paleomagnetic and Rock Magnetic Data

    Science.gov (United States)

    Minnett, R.; Koppers, A.; Tauxe, L.; Constable, C.; Pisarevsky, S. A.; Jackson, M.; Solheid, P.; Banerjee, S.; Johnson, C.

    2006-12-01

    The Magnetics Information Consortium (MagIC) is commissioned to implement and maintain an online portal to a relational database populated by both rock and paleomagnetic data. The goal of MagIC is to archive all measurements and the derived properties for studies of paleomagnetic directions (inclination, declination) and intensities, and for rock magnetic experiments (hysteresis, remanence, susceptibility, anisotropy). MagIC is hosted under EarthRef.org at http://earthref.org/MAGIC/ and has two search nodes, one for paleomagnetism and one for rock magnetism. Both nodes provide query building based on location, reference, methods applied, material type and geological age, as well as a visual map interface to browse and select locations. The query result set is displayed in a digestible tabular format allowing the user to descend through hierarchical levels such as from locations to sites, samples, specimens, and measurements. At each stage, the result set can be saved and, if supported by the data, can be visualized by plotting global location maps, equal area plots, or typical Zijderveld, hysteresis, and various magnetization and remanence diagrams. User contributions to the MagIC database are critical to achieving a useful research tool. We have developed a standard data and metadata template (Version 2.1) that can be used to format and upload all data at the time of publication in Earth Science journals. Software tools are provided to facilitate population of these templates within Microsoft Excel. These tools allow for the import/export of text files and provide advanced functionality to manage and edit the data, and to perform various internal checks to maintain data integrity and prepare for uploading. The MagIC Contribution Wizard at http://earthref.org/MAGIC/upload.htm executes the upload and takes only a few minutes to process several thousand data records. The standardized MagIC template files are stored in the digital archives of EarthRef.org where they

  3. Use of scientific information database to pursue the policy in science and industry

    International Nuclear Information System (INIS)

    Vajkhet, I.

    1984-01-01

    Analysis methods of scientific and technical information are presented to determine regularities in scientific and technical development. As a rule, the studies are carried out using data base of patent literature. Three methods of are considered. The first one - analysis of data flow, when trends in technique, degree of the technique monopolyzation and its urgency are evaluated. The second one - lexical analysis, consisting in recording new terms and deviations in the number of terms with time. The third one - analysis of quatation networks, which leads to the establisment of author and subject groups, characterizing scientific and technical activity of the object observed, of a firm or subject area for instance

  4. Informing principal policy reforms in South Africa through data-based evidence

    Directory of Open Access Journals (Sweden)

    Gabrielle Wills

    2015-12-01

    Full Text Available In the past decade there has been a notable shift in South African education policy that raises the value of school leadership as a lever for learning improvements. Despite a growing discourse on school leadership, there has been a lack of empirical based evidence on principals to inform, validate or debate the efficacy of proposed policies in raising the calibre of school principals. Drawing on findings from a larger study to understand the labour market for school principals in South Africa, this paper highlights four overarching characteristics of this market with implications for informing principal policy reforms. The paper notes that improving the design and implementation of policies guiding the appointment process for principals is a matter of urgency. A substantial and increasing number of principal replacements are taking place across South African schools given a rising age profile of school principals. In a context of low levels of principal mobility and high tenure, the leadership trajectory of the average school is established for nearly a decade with each principal replacement. Evidence-based policy making has a strong role to play in getting this right.

  5. Building a genome database using an object-oriented approach.

    Science.gov (United States)

    Barbasiewicz, Anna; Liu, Lin; Lang, B Franz; Burger, Gertraud

    2002-01-01

    GOBASE is a relational database that integrates data associated with mitochondria and chloroplasts. The most important data in GOBASE, i. e., molecular sequences and taxonomic information, are obtained from the public sequence data repository at the National Center for Biotechnology Information (NCBI), and are validated by our experts. Maintaining a curated genomic database comes with a towering labor cost, due to the shear volume of available genomic sequences and the plethora of annotation errors and omissions in records retrieved from public repositories. Here we describe our approach to increase automation of the database population process, thereby reducing manual intervention. As a first step, we used Unified Modeling Language (UML) to construct a list of potential errors. Each case was evaluated independently, and an expert solution was devised, and represented as a diagram. Subsequently, the UML diagrams were used as templates for writing object-oriented automation programs in the Java programming language.

  6. How can developing countries harness biotechnology to improve health?

    Directory of Open Access Journals (Sweden)

    Persad Deepa L

    2007-12-01

    Full Text Available Abstract Background The benefits of genomics and biotechnology are concentrated primarily in the industrialized world, while their potential to combat neglected diseases in the developing world has been largely untapped. Without building developing world biotechnology capacity to address local health needs, this disparity will only intensify. To assess the potential of genomics to address health needs in the developing world, the McLaughlin-Rotman Centre for Global Health, along with local partners, organized five courses on Genomics and Public Health Policy in the developing world. The overall objective of the courses was to collectively explore how to best harness genomics to improve health in each region. This article presents and analyzes the recommendations from all five courses. Discussion In this paper we analyze recommendations from 232 developing world experts from 58 countries who sought to answer how best to harness biotechnology to improve health in their regions. We divide their recommendations into four categories: science; finance; ethics, society and culture; and politics. Summary The Courses' recommendations can be summarized across the four categories listed above: Science - Collaborate through national, regional, and international networks - Survey and build capacity based on proven models through education, training, and needs assessments Finance - Develop regulatory and intellectual property frameworks for commercialization of biotechnology - Enhance funding and affordability of biotechnology - Improve the academic-industry interface and the role of small and medium enterprise Ethics, Society, Culture - Develop public engagement strategies to inform and educate the public about developments in genomics and biotechnology - Develop capacity to address ethical, social and cultural issues - Improve accessibility and equity Politics - Strengthen understanding, leadership and support at the political level for biotechnology

  7. Database Description - Arabidopsis Phenome Database | LSDB Archive [Life Science Database Archive metadata

    Lifescience Database Archive (English)

    Full Text Available List Contact us Arabidopsis Phenome Database Database Description General information of database Database n...ame Arabidopsis Phenome Database Alternative name - DOI 10.18908/lsdba.nbdc01509-000 Creator Creator Name: H... BioResource Center Hiroshi Masuya Database classification Plant databases - Arabidopsis thaliana Organism T...axonomy Name: Arabidopsis thaliana Taxonomy ID: 3702 Database description The Arabidopsis thaliana phenome i...heir effective application. We developed the new Arabidopsis Phenome Database integrating two novel database

  8. CIEQUI: An oracle database for information management in the analytical chemistry unit of CIEMAT

    International Nuclear Information System (INIS)

    Rucandio, M.I.; Roca, M.

    1997-01-01

    An in-house software product named CIEQUI has been developed in CIEMAT, with purpose-written programs as a laboratory information management system (LIMS). It is grounded upon relational data base from ORACLE, with the supported languages SQL, PL/SQL, SQL*Plus, and DEC BASIS, and with the tools SQL*Loader, SQL*Forms and SQL*Menu. Its internal organization and functional structure are schematically represented and the advantages and disadvantages of a tailored management system are described. Although it is difficult to unity the analysis criteria in a R AND D organization such as CIEMAT, because of the wide variety in the sample type and in the involved determinations, our system provides remarkable advantages. CIEQUI reflects the complexity of the laboratories it serves. It is a system easily accessible to all, that help us in many tasks about organization and management of the analytical service provided through the different laboratories of the CIEMAT Analytical Chemistry Unit. (Author)

  9. Directory of IAEA databases

    International Nuclear Information System (INIS)

    1991-11-01

    The first edition of the Directory of IAEA Databases is intended to describe the computerized information sources available to IAEA staff members. It contains a listing of all databases produced at the IAEA, together with information on their availability

  10. Opportunities for biotechnology and policy regarding mycotoxin issues in international trade.

    Science.gov (United States)

    Kendra, David F; Dyer, Rex B

    2007-10-20

    Despite being introduced more than a decade ago, agricultural biotechnology still remains framed in controversy impacting both the global economy and international regulations. Controversies surrounding agricultural biotechnology produced crops and foods commonly focus on human and environmental safety, intellectual property rights, consumer choice, ethics, food security, poverty reduction and environmental conservation. Originally, some consumers were reluctant to accept the first generation agricultural biotechnology products because they appeared to primarily benefit agricultural producers; however, it is clear from continued evaluations that these technologies also improved both the safety and wholesomeness of food and helped improve the environment. Plants engineered to resist insect pests and tolerate less toxic pesticides resulted in improved yields thereby enabling farmers to produce more food per acre while reducing the need for herbicides, pesticides, and water and tilling. An indirect benefit of reduced pest damage in transgenic corn expressing genes to control insect pests is lower levels of mycotoxins, most notably those caused by the genus Fusarium. Mycotoxins are an important regulatory issue globally because of their toxic and carcinogenic potential to humans and animals. Complicating this issue is the fact that toxicological databases for mycotoxins are relatively incomplete compared to other food contaminants. Current debates about agricultural biotechnology and mycotoxins reveal significant differences in perception of associated risks and benefits. When faced with uncertainty, regulators tend to set limits as low as possible. Additionally, some regulators invoke the "Precautionary Principle" when limited information is available or disputes over interpretation exist for possible contaminants, including mycotoxins. A major concern regarding use of the "Precautionary Principle" is the appearance that regulators can justify setting any limit on the

  11. Bioceres: AG Biotechnology from Argentina

    Directory of Open Access Journals (Sweden)

    Roberto Feeney

    2016-04-01

    Full Text Available In this case we present a business decision-making situation in which the CEO of an Argentine Ag Biotech company, Bioceres, has to decide the best way to commercialize a new drought-tolerant transgenic technology. The company was founded by twenty three farmers, who shared a common dream that Argentina could become a benchmark in the development of Ag biotechnology. The case has strategic and financial implications, as well as decision-making situation involving a joint venture with an American biotechnology company. It also introduces to discussion the business models of Ag biotechnology companies in developing countries.

  12. FOOD BIOTECHNOLOGY - SUSTAINABLE DEVELOPMENT STRATEGY

    Directory of Open Access Journals (Sweden)

    Irina Ramona PECINGINĂ

    2017-05-01

    Full Text Available Biotechnology is the integral application of biological and engineering sciences for the technological use of living organisms, biologically active acellular structures and molecular analogues for the production of goods and services.The role of biotechnology is very important in the food industry; this is a biotechnology because agro-food raw materials are biological products and therefore their conservation until consumption, fresh or industrialization involves the control of the enzymatic activity of the vegetal and animal tissues or of the microflora contamination.

  13. Methods of collecting the phytometric information to create a database of spectrometric and subject-specific characteristics of geosystems

    Directory of Open Access Journals (Sweden)

    Владислав Малышев

    2017-09-01

    Full Text Available The article deals with methodological basis for the organization and carrying out of field work in the aerospace polygon to collect spectral and ground-based metadata. The methods for gathering phytometric data at the experimental sites and with the route studies of spectral and phytometric characteristics of vegetation have been presented. The work was carried out on the test area of the Kursk aerospace polygon in 2015-2016. The methodology developed on the test area is used at other polygons while collecting ground-based metadata when performing spectrometric research of Earth covers. Collection of the phytometric data and other subject-specific characteristics of the research object, aims to accurately describe the state of the object and the conditions of the shooting. Subject-specific characteristics include: geographical features of the object, the coordinates, description of land cover, climate, weather conditions at the time of shooting. Areas with different vegetation types are allocated at the landfill site. The research routes are arranged to cover the maximum diversity of plant communities. Experimental platforms, on which phytometric measurements take place and samples are collected, are located along the lines of the planned routes. Flight spectral shooting and the route ground-based measurements are taken on the same routes. The information obtained at points and on the routes is processed in laboratory conditions. Metadata in digital form are stored in a database in a specific format. The article proposes an original approach to the creation of a database of spectral and object-specific properties of objects on the Earth’s surface. The storage structure of the spectral and subject-specific geosystems’ characteristics in the database has been highlighted.

  14. Expression information data table (Strain List) of Drosophila GAL4 enhancer trap lines - GETDB | LSDB Archive [Life Science Database Archive metadata

    Lifescience Database Archive (English)

    Full Text Available List Contact us GETDB Expression information data table (Strain List) of Drosophila GAL4 enhancer trap lines... Data detail Data name Expression information data table (Strain List) of Drosophila GAL4 enhancer trap line...his Database Site Policy | Contact Us Expression information data table (Strain List) of Drosophila GAL4 enhancer trap lines - GETDB | LSDB Archive ...

  15. Evaluating effectiveness of infection control efforts in hospitals using information in microbiological laboratory databases.

    Science.gov (United States)

    Saito, Norihiro; Itoga, Masamichi; Kimura, Masahiko; Inoue, Fumio; Minakawa, Satoko; Kimura, Toshiyuki; Ozaki, Hiromi; Saito, Yumiko; Takahashi, Mikiko; Fujishima, Tetsuhiro; Mizuno, Sumie; Ogawa, Shin; Kitayama, Yuko; Kudo, Kazumi; Minami, Kazushi; Abo, Fumiko; Takano, Yasuyuki; Ohdaira, Naotake; Hamada, Satoshi; Ueki, Shigeharu; Hirokawa, Makoto; Kayaba, Hiroyuki

    2017-12-01

    To analyze the quality of infection control activities, bacteriological data relevant to infection control was evaluated through the microbiological data warehouse networking hospitals in two medical regions. Data regarding bacterial test results of 19 hospitals were extracted from two microbiological laboratory information data bases. The rate of MRSA among total S. aureus was used as a general indicator of infection control activities. The occupancy rate of nasal or pharyngeal swabs among MRSA-positive bacteriological samples was used as an indicator of attention paid for infection control in intensive care wards. The number of blood culture sets per examined patient was utilized as an indicator for life-long vocational education on updated medical practice relevant to infectious diseases. The rate of MRSA was significantly higher in secondary private hospitals. The occupancy rate of nasal or pharyngeal swabs was significantly higher in tertiary hospitals. The average number of blood culture set per examined patient were 1.55, 1.54 and 1.39 in tertiary, secondary public and secondary private hospitals, respectively; however, there were no statistical differences between groups. Data bases of microbiological test results shared by hospital laboratories are useful for evaluating regional infection control activities.

  16. PRODUCING INFORMATION FOR CORINE DATABASE BY USING CLASSIFICATION METHOD: A CASE STUDY OF SAZLIDERE BASIN, ISTANBUL

    Directory of Open Access Journals (Sweden)

    F. B. Sarıyılmaz

    2017-11-01

    Full Text Available The Sazlidere Basin is located on the European side of Istanbul within the borders of Arnavutkoy and Basaksehir districts. The total area of the basin, which is largely located within the province of Arnavutkoy, is approximately 177 km2. The Sazlidere Basin is faced with intense urbanization pressures and land use / cover change due to the Northern Marmara Motorway, 3rd airport and Channel Istanbul Projects, which are planned to be realized in the Arnavutkoy region. Due to the mentioned projects, intense land use /cover changes occur in the basin. In this study, 2000 and 2012 dated LANDSAT images were supervised classified based on CORINE Land Cover first level to determine the land use/cover classes. As a result, four information classes were identified. These classes are water bodies, forest and semi-natural areas, agricultural areas and artificial surfaces. Accuracy analysis of the images were performed following the classification process. The supervised classified images that have the smallest mapping units 0.09 ha and 0.64 ha were generalized to be compatible with the CORINE Land Cover data. The image pixels have been rearranged by using the thematic pixel aggregation method as the smallest mapping unit is 25 ha. These results were compared with CORINE Land Cover 2000 and CORINE Land Cover 2012, which were obtained by digitizing land cover and land use classes on satellite images. It has been determined that the compared results are compatible with each other in terms of quality and quantity.

  17. Producing Information for Corine Database by Using Classification Method: a Case Study of Sazlidere Basin, Istanbul

    Science.gov (United States)

    Sarıyılmaz, F. B.; Musaoğlu, N.; Uluğtekin, N.

    2017-11-01

    The Sazlidere Basin is located on the European side of Istanbul within the borders of Arnavutkoy and Basaksehir districts. The total area of the basin, which is largely located within the province of Arnavutkoy, is approximately 177 km2. The Sazlidere Basin is faced with intense urbanization pressures and land use / cover change due to the Northern Marmara Motorway, 3rd airport and Channel Istanbul Projects, which are planned to be realized in the Arnavutkoy region. Due to the mentioned projects, intense land use /cover changes occur in the basin. In this study, 2000 and 2012 dated LANDSAT images were supervised classified based on CORINE Land Cover first level to determine the land use/cover classes. As a result, four information classes were identified. These classes are water bodies, forest and semi-natural areas, agricultural areas and artificial surfaces. Accuracy analysis of the images were performed following the classification process. The supervised classified images that have the smallest mapping units 0.09 ha and 0.64 ha were generalized to be compatible with the CORINE Land Cover data. The image pixels have been rearranged by using the thematic pixel aggregation method as the smallest mapping unit is 25 ha. These results were compared with CORINE Land Cover 2000 and CORINE Land Cover 2012, which were obtained by digitizing land cover and land use classes on satellite images. It has been determined that the compared results are compatible with each other in terms of quality and quantity.

  18. Automatic sorting of toxicological information into the IUCLID (International Uniform Chemical Information Database) endpoint-categories making use of the semantic search engine Go3R.

    Science.gov (United States)

    Sauer, Ursula G; Wächter, Thomas; Hareng, Lars; Wareing, Britta; Langsch, Angelika; Zschunke, Matthias; Alvers, Michael R; Landsiedel, Robert

    2014-06-01

    The knowledge-based search engine Go3R, www.Go3R.org, has been developed to assist scientists from industry and regulatory authorities in collecting comprehensive toxicological information with a special focus on identifying available alternatives to animal testing. The semantic search paradigm of Go3R makes use of expert knowledge on 3Rs methods and regulatory toxicology, laid down in the ontology, a network of concepts, terms, and synonyms, to recognize the contents of documents. Search results are automatically sorted into a dynamic table of contents presented alongside the list of documents retrieved. This table of contents allows the user to quickly filter the set of documents by topics of interest. Documents containing hazard information are automatically assigned to a user interface following the endpoint-specific IUCLID5 categorization scheme required, e.g. for REACH registration dossiers. For this purpose, complex endpoint-specific search queries were compiled and integrated into the search engine (based upon a gold standard of 310 references that had been assigned manually to the different endpoint categories). Go3R sorts 87% of the references concordantly into the respective IUCLID5 categories. Currently, Go3R searches in the 22 million documents available in the PubMed and TOXNET databases. However, it can be customized to search in other databases including in-house databanks. Copyright © 2013 Elsevier Ltd. All rights reserved.

  19. NCBI GEO: mining millions of expression profiles—database and tools

    OpenAIRE

    Barrett, Tanya; Suzek, Tugba O.; Troup, Dennis B.; Wilhite, Stephen E.; Ngau, Wing-Chi; Ledoux, Pierre; Rudnev, Dmitry; Lash, Alex E.; Fujibuchi, Wataru; Edgar, Ron

    2004-01-01

    The Gene Expression Omnibus (GEO) at the National Center for Biotechnology Information (NCBI) is the largest fully public repository for high-throughput molecular abundance data, primarily gene expression data. The database has a flexible and open design that allows the submission, storage and retrieval of many data types. These data include microarray-based experiments measuring the abundance of mRNA, genomic DNA and protein molecules, as well as non-array-based technologies such as serial a...

  20. Epistemic Beliefs and Conceptual Understanding in Biotechnology: A Case Study

    Science.gov (United States)

    Rebello, Carina M.; Siegel, Marcelle A.; Witzig, Stephen B.; Freyermuth, Sharyn K.; McClure, Bruce A.

    2012-01-01

    The purpose of this investigation was to explore students' epistemic beliefs and conceptual understanding of biotechnology. Epistemic beliefs can influence reasoning, how individuals evaluate information, and informed decision making abilities. These skills are important for an informed citizenry that will participate in debates regarding areas in…