WorldWideScience

Sample records for biomedical imaging science

  1. Signal and image analysis for biomedical and life sciences

    CERN Document Server

    Sun, Changming; Pham, Tuan D; Vallotton, Pascal; Wang, Dadong

    2014-01-01

    With an emphasis on applications of computational models for solving modern challenging problems in biomedical and life sciences, this book aims to bring collections of articles from biologists, medical/biomedical and health science researchers together with computational scientists to focus on problems at the frontier of biomedical and life sciences. The goals of this book are to build interactions of scientists across several disciplines and to help industrial users apply advanced computational techniques for solving practical biomedical and life science problems. This book is for users in t

  2. Mining biomedical images towards valuable information retrieval in biomedical and life sciences.

    Science.gov (United States)

    Ahmed, Zeeshan; Zeeshan, Saman; Dandekar, Thomas

    2016-01-01

    Biomedical images are helpful sources for the scientists and practitioners in drawing significant hypotheses, exemplifying approaches and describing experimental results in published biomedical literature. In last decades, there has been an enormous increase in the amount of heterogeneous biomedical image production and publication, which results in a need for bioimaging platforms for feature extraction and analysis of text and content in biomedical images to take advantage in implementing effective information retrieval systems. In this review, we summarize technologies related to data mining of figures. We describe and compare the potential of different approaches in terms of their developmental aspects, used methodologies, produced results, achieved accuracies and limitations. Our comparative conclusions include current challenges for bioimaging software with selective image mining, embedded text extraction and processing of complex natural language queries. PMID:27538578

  3. Mining biomedical images towards valuable information retrieval in biomedical and life sciences.

    Science.gov (United States)

    Ahmed, Zeeshan; Zeeshan, Saman; Dandekar, Thomas

    2016-01-01

    Biomedical images are helpful sources for the scientists and practitioners in drawing significant hypotheses, exemplifying approaches and describing experimental results in published biomedical literature. In last decades, there has been an enormous increase in the amount of heterogeneous biomedical image production and publication, which results in a need for bioimaging platforms for feature extraction and analysis of text and content in biomedical images to take advantage in implementing effective information retrieval systems. In this review, we summarize technologies related to data mining of figures. We describe and compare the potential of different approaches in terms of their developmental aspects, used methodologies, produced results, achieved accuracies and limitations. Our comparative conclusions include current challenges for bioimaging software with selective image mining, embedded text extraction and processing of complex natural language queries.

  4. Mining biomedical images towards valuable information retrieval in biomedical and life sciences

    Science.gov (United States)

    Ahmed, Zeeshan; Zeeshan, Saman; Dandekar, Thomas

    2016-01-01

    Biomedical images are helpful sources for the scientists and practitioners in drawing significant hypotheses, exemplifying approaches and describing experimental results in published biomedical literature. In last decades, there has been an enormous increase in the amount of heterogeneous biomedical image production and publication, which results in a need for bioimaging platforms for feature extraction and analysis of text and content in biomedical images to take advantage in implementing effective information retrieval systems. In this review, we summarize technologies related to data mining of figures. We describe and compare the potential of different approaches in terms of their developmental aspects, used methodologies, produced results, achieved accuracies and limitations. Our comparative conclusions include current challenges for bioimaging software with selective image mining, embedded text extraction and processing of complex natural language queries. PMID:27538578

  5. Interactive Processing and Visualization of Image Data forBiomedical and Life Science Applications

    Energy Technology Data Exchange (ETDEWEB)

    Staadt, Oliver G.; Natarjan, Vijay; Weber, Gunther H.; Wiley,David F.; Hamann, Bernd

    2007-02-01

    Background: Applications in biomedical science and life science produce large data sets using increasingly powerful imaging devices and computer simulations. It is becoming increasingly difficult for scientists to explore and analyze these data using traditional tools. Interactive data processing and visualization tools can support scientists to overcome these limitations. Results: We show that new data processing tools and visualization systems can be used successfully in biomedical and life science applications. We present an adaptive high-resolution display system suitable for biomedical image data, algorithms for analyzing and visualization protein surfaces and retinal optical coherence tomography data, and visualization tools for 3D gene expression data. Conclusion: We demonstrated that interactive processing and visualization methods and systems can support scientists in a variety of biomedical and life science application areas concerned with massive data analysis.

  6. Interactive processing and visualization of image data for biomedical and life science applications

    OpenAIRE

    Staadt, Oliver G.; Natarajan, Vijay; Weber, Gunther H.; Wiley, David F; Hamann, Bernd

    2007-01-01

    Background Applications in biomedical science and life science produce large data sets using increasingly powerful imaging devices and computer simulations. It is becoming increasingly difficult for scientists to explore and analyze these data using traditional tools. Interactive data processing and visualization tools can support scientists to overcome these limitations. Results We show that new data processing tools and visualization systems can be used successfully in biomedical and life s...

  7. Interactive processing and visualization of image data for biomedical and life science applications

    OpenAIRE

    Staadt, Oliver G; Natarajan, Vijay; Weber, Gunther H.; Wiley, David F.; Hamann, Bernd

    2007-01-01

    Background: Applications in biomedical science and life science produce large data sets using increasingly powerful imaging devices and computer simulations. It is becoming increasingly difficult for scientists to explore and analyze these data using traditional tools. Interactive data processing and visualization tools can support scientists to overcome these limitations. Results: We show that new data processing tools and visualization systems can be used successfully in biomedical and l...

  8. Interactive Processing and Visualization of Image Data for Biomedical and Life Science Applications

    OpenAIRE

    Staadt, Oliver G; Natarjan, Vijay; Weber, Gunther H.; Wiley, David F.; Hamann, Bernd

    2007-01-01

    Background Applications in biomedical science and life science produce large data sets using increasingly powerful imaging devices and computer simulations. It is becoming increasingly difficult for scientists to explore and analyze these data using traditional tools. Interactive data processing and visualization tools can support scientists to overcome these limitations. Results We show that new data processing tools and visualization systems can be used successfully in biomedical and life s...

  9. Molecular Biomedical Imaging Laboratory (MBIL)

    Data.gov (United States)

    Federal Laboratory Consortium — The Molecular Biomedical Imaging Laboratory (MBIL) is adjacent-a nd has access-to the Department of Radiology and Imaging Sciences clinical imaging facilities. MBIL...

  10. Biomedical optical imaging

    CERN Document Server

    Fujimoto, James G

    2009-01-01

    Biomedical optical imaging is a rapidly emerging research area with widespread fundamental research and clinical applications. This book gives an overview of biomedical optical imaging with contributions from leading international research groups who have pioneered many of these techniques and applications. A unique research field spanning the microscopic to the macroscopic, biomedical optical imaging allows both structural and functional imaging. Techniques such as confocal and multiphoton microscopy provide cellular level resolution imaging in biological systems. The integration of this tech

  11. Modern Trends in Imaging XI: Impedance Measurements in the Biomedical Sciences

    Directory of Open Access Journals (Sweden)

    Frederick D. Coffman

    2012-01-01

    Full Text Available Biological organisms and their component organs, tissues and cells have unique electrical impedance properties. Impedance properties often change with changes in structure, composition, and metabolism, and can be indicative of the onset and progression of disease states. Over the past 100 years, instruments and analytical methods have been developed to measure the impedance properties of biological specimens and to utilize these measurements in both clinical and basic science settings. This chapter will review the applications of impedance measurements in the biomedical sciences, from whole body analysis to impedance measurements of single cells and cell monolayers, and how cellular impedance measuring instruments can now be used in high throughput screening applications.

  12. Biomedical signals, imaging, and informatics

    CERN Document Server

    Bronzino, Joseph D

    2014-01-01

    Known as the bible of biomedical engineering, The Biomedical Engineering Handbook, Fourth Edition, sets the standard against which all other references of this nature are measured. As such, it has served as a major resource for both skilled professionals and novices to biomedical engineering.Biomedical Signals, Imaging, and Informatics, the third volume of the handbook, presents material from respected scientists with diverse backgrounds in biosignal processing, medical imaging, infrared imaging, and medical informatics.More than three dozen specific topics are examined, including biomedical s

  13. Computational intelligence in biomedical imaging

    CERN Document Server

    2014-01-01

    This book provides a comprehensive overview of the state-of-the-art computational intelligence research and technologies in biomedical images with emphasis on biomedical decision making. Biomedical imaging offers useful information on patients’ medical conditions and clues to causes of their symptoms and diseases. Biomedical images, however, provide a large number of images which physicians must interpret. Therefore, computer aids are demanded and become indispensable in physicians’ decision making. This book discusses major technical advancements and research findings in the field of computational intelligence in biomedical imaging, for example, computational intelligence in computer-aided diagnosis for breast cancer, prostate cancer, and brain disease, in lung function analysis, and in radiation therapy. The book examines technologies and studies that have reached the practical level, and those technologies that are becoming available in clinical practices in hospitals rapidly such as computational inte...

  14. Imaging sciences workshop

    Energy Technology Data Exchange (ETDEWEB)

    Candy, J.V.

    1994-11-15

    This workshop on the Imaging Sciences sponsored by Lawrence Livermore National Laboratory contains short abstracts/articles submitted by speakers. The topic areas covered include the following: Astronomical Imaging; biomedical imaging; vision/image display; imaging hardware; imaging software; Acoustic/oceanic imaging; microwave/acoustic imaging; computed tomography; physical imaging; imaging algorithms. Selected papers are indexed separately for inclusion in the Energy Science and Technology Database.

  15. Advanced biomedical image analysis

    CERN Document Server

    Haidekker, Mark A

    2010-01-01

    "This book covers the four major areas of image processing: Image enhancement and restoration, image segmentation, image quantification and classification, and image visualization. Image registration, storage, and compression are also covered. The text focuses on recently developed image processing and analysis operators and covers topical research"--Provided by publisher.

  16. Terahertz biomedical science and technology

    CERN Document Server

    Son, Joo-Hiuk

    2014-01-01

    Introduction to Biomedical Studies Using Terahertz WavesJoo-Hiuk SonSection I Terahertz TechnologyTerahertz Sources and DetectorsHyunyong Choi and Joo-Hiuk SonTabletop High-Power Terahertz Pulse Generation TechniquesYun-Shik LeeTerahertz Imaging and Tomography TechniquesHyunyong Choi and Joo-Hiuk SonCompact Solid-State Electronic Terahertz Devices and CircuitsJae-Sung Rieh, Daekeun Yoon, and Jongwon Yun<

  17. Biomedical Imaging Principles and Applications

    CERN Document Server

    Salzer, Reiner

    2012-01-01

    This book presents and describes imaging technologies that can be used to study chemical processes and structural interactions in dynamic systems, principally in biomedical systems. The imaging technologies, largely biomedical imaging technologies such as MRT, Fluorescence mapping, raman mapping, nanoESCA, and CARS microscopy, have been selected according to their application range and to the chemical information content of their data. These technologies allow for the analysis and evaluation of delicate biological samples, which must not be disturbed during the profess. Ultimately, this may me

  18. Mathematical modeling in biomedical imaging

    CERN Document Server

    2009-01-01

    This volume gives an introduction to a fascinating research area to applied mathematicians. It is devoted to providing the exposition of promising analytical and numerical techniques for solving challenging biomedical imaging problems, which trigger the investigation of interesting issues in various branches of mathematics.

  19. Biomedical Image Processing

    CERN Document Server

    Deserno, Thomas Martin

    2011-01-01

    In modern medicine, imaging is the most effective tool for diagnostics, treatment planning and therapy. Almost all modalities have went to directly digital acquisition techniques and processing of this image data have become an important option for health care in future. This book is written by a team of internationally recognized experts from all over the world. It provides a brief but complete overview on medical image processing and analysis highlighting recent advances that have been made in academics. Color figures are used extensively to illustrate the methods and help the reader to understand the complex topics.

  20. Biomedical signal and image processing

    CERN Document Server

    Najarian, Kayvan

    2012-01-01

    INTRODUCTION TO DIGITAL SIGNAL AND IMAGE PROCESSINGSignals and Biomedical Signal ProcessingIntroduction and OverviewWhat is a ""Signal""?Analog, Discrete, and Digital SignalsProcessing and Transformation of SignalsSignal Processing for Feature ExtractionSome Characteristics of Digital ImagesSummaryProblemsFourier TransformIntroduction and OverviewOne-Dimensional Continuous Fourier TransformSampling and NYQUIST RateOne-Dimensional Discrete Fourier TransformTwo-Dimensional Discrete Fourier TransformFilter DesignSummaryProblemsImage Filtering, Enhancement, and RestorationIntroduction and Overview

  1. Science gateways for biomedical big data analysis

    OpenAIRE

    Kampen, van, PJW; Olabarriaga, S.D.; Shahand, S.

    2015-01-01

    Biomedical researchers are facing data deluge challenges such as dealing with large volume of complex heterogeneous data and complex and computationally demanding data processing methods. Such scale and complexity of biomedical research requires multi-disciplinary collaboration between scientists from different organizations. Data-driven or e-Science methods are defined as a combination of Information Technology (IT) and science that enables scientists to tackle the data deluge challenges. Th...

  2. Biomedical image understanding methods and applications

    CERN Document Server

    Lim, Joo-Hwee; Xiong, Wei

    2015-01-01

    A comprehensive guide to understanding and interpreting digital images in medical and functional applications Biomedical Image Understanding focuses on image understanding and semantic interpretation, with clear introductions to related concepts, in-depth theoretical analysis, and detailed descriptions of important biomedical applications. It covers image processing, image filtering, enhancement, de-noising, restoration, and reconstruction; image segmentation and feature extraction; registration; clustering, pattern classification, and data fusion. With contributions from ex

  3. Magnetic Resonance Imaging in Biomedical Engineering

    Science.gov (United States)

    Kaśpar, Jan; Hána, Karel; Smrčka, Pavel; Brada, Jiří; Beneš, Jiří; Šunka, Pavel

    2007-11-01

    The basic principles of magnetic resonance imaging covering physical principles and basic imaging techniques will be presented as a strong tool in biomedical engineering. Several applications of MRI in biomedical research practiced at the MRI laboratory of the FBMI CTU including other laboratory instruments and activities are introduced.

  4. Effective written communication in biomedical sciences.

    Science.gov (United States)

    Rugh, K S; Hahn, A W

    1996-01-01

    The written word is the biomedical scientist's most important and most enduring communication tool. Nevertheless, the development of writing skills receives little attention in most scientific disciplines and the ability to conduct research is often viewed as more important than the ability to communicate the results of that research. Consequently, many scientists lack the writing skills necessary to effectively convey essential aspects of their research. In this paper, we will discuss the importance of good writing skills, give examples of common mistakes that are made in biomedical science writing and offer suggestions on how to improve written communication. PMID:8672681

  5. Computer vision for biomedical image applications. Proceedings

    International Nuclear Information System (INIS)

    This book constitutes the refereed proceedings of the First International Workshop on Computer Vision for Biomedical Image Applications: Current Techniques and Future Trends, CVBIA 2005, held in Beijing, China, in October 2005 within the scope of ICCV 20. (orig.)

  6. Mathematical modeling in biomedical imaging

    CERN Document Server

    2012-01-01

    This volume reports on recent mathematical and computational advances in optical, ultrasound, and opto-acoustic tomographies. It outlines the state-of-the-art and future directions in these fields and provides readers with the most recently developed mathematical and computational tools.  It is particularly suitable for researchers and graduate students in applied mathematics and biomedical engineering.

  7. Acquisition and manipulation of computed tomography images of the maxillofacial region for biomedical prototyping

    Energy Technology Data Exchange (ETDEWEB)

    Meurer, Maria Ines [Universidade Federal de Santa Catarina (UFSC), Florianopolis, SC (Brazil). Dept. of Pathology]. E-mail: emaninha@gmail.com; Meurer, Eduardo [Universidade do Sul de Santa Catarina (UNISUL), Tubarao, SC (Brazil); Silva, Jorge Vicente Lopes da; Santa Barbara, Ailton [Centro de Pesquisa Renato Archer (CenPRA), Campinas, SP (Brazil); Nobre, Luiz Felipe [Universidade Federal de Santa Catarina (UFSC), Florianopolis, SC (Brazil). Dept. of Clinical Practice; Oliveira, Marilia Gerhardt de [Pontificia Universidade Catolica do Rio Grande do Sul (PUCRS), Porto Alegre, RS (Brazil). Dept. of Surgery; Silva, Daniela Nascimento [Pontificia Universidade Catolica do Rio Grande do Sul (PUCRS), Porto Alegre, RS (Brazil). Faculdade de Odontologia. Dept. of Surgery

    2008-01-15

    Biomedical prototyping has resulted from a merger of rapid prototyping and imaging diagnosis technologies. However, this process is complex, considering the necessity of interaction between biomedical sciences and engineering. Good results are highly dependent on the acquisition of computed tomography images and their subsequent manipulation by means of specific software. The present study describes the experience of a multidisciplinary group of researchers in the acquisition and manipulation of computed tomography images of the maxillofacial region aiming at biomedical prototyping for surgical purposes. (author)

  8. University of Vermont Center for Biomedical Imaging

    Energy Technology Data Exchange (ETDEWEB)

    Bernstein, Dr. Ira [University of Vermont and State Agricultural College

    2013-08-02

    This grant was awarded in support of Phase 2 of the University of Vermont Center for Biomedical Imaging. Phase 2 outlined several specific aims including: The development of expertise in MRI and fMRI imaging and their applications The acquisition of peer reviewed extramural funding in support of the Center The development of a Core Imaging Advisory Board, fee structure and protocol review and approval process.

  9. Optimizing biomedical science learning in a veterinary curriculum: a review.

    Science.gov (United States)

    Warren, Amy L; Donnon, Tyrone

    2013-01-01

    As veterinary medical curricula evolve, the time dedicated to biomedical science teaching, as well as the role of biomedical science knowledge in veterinary education, has been scrutinized. Aside from being mandated by accrediting bodies, biomedical science knowledge plays an important role in developing clinical, diagnostic, and therapeutic reasoning skills in the application of clinical skills, in supporting evidence-based veterinary practice and life-long learning, and in advancing biomedical knowledge and comparative medicine. With an increasing volume and fast pace of change in biomedical knowledge, as well as increased demands on curricular time, there has been pressure to make biomedical science education efficient and relevant for veterinary medicine. This has lead to a shift in biomedical education from fact-based, teacher-centered and discipline-based teaching to applicable, student-centered, integrated teaching. This movement is supported by adult learning theories and is thought to enhance students' transference of biomedical science into their clinical practice. The importance of biomedical science in veterinary education and the theories of biomedical science learning will be discussed in this article. In addition, we will explore current advances in biomedical teaching methodologies that are aimed to maximize knowledge retention and application for clinical veterinary training and practice.

  10. Biomedical and Environmental Sciences INFORMATION FOR AUTHORS

    Institute of Scientific and Technical Information of China (English)

    2007-01-01

    @@ Biomedical and Environmental Sciences, an international journal with emphasis on scientific findings in China, publishes articles dealing with biologic and toxic effects of environmental pollutants on man and other forms of life. The effects may be measured with pharmacological, biochemical, pathological, and immunological techniques. The journal also publishes reports dealing with the entry, transport, and fate of natural and anthropogenic chemicals in the biosphere, and their impact on human health and well-being.Papers describing biochemical, pharmacological, pathological, toxicological and immunological studies of pharmaceuticals (biotechnological products) are also welcome.

  11. Envisioning the Future (Biomedical Imaging)

    Science.gov (United States)

    ... the beginning, I have sought to bring to biology rigorous quantitative techniques at all levels of imaging, whether trying to diagnose disease in ... today is to understand that the complexity of biology is much greater than we ... at the local level. That is why imaging has become so important. ...

  12. Convergence of Terahertz Sciences in Biomedical Systems

    CERN Document Server

    Kim, Yong; Han, Haewook; Han, Joon; Ahn, Jaewook; Son, Joo-Hiuk; Park, Woong-Yang; Jeong, Young

    2012-01-01

    Recent technological breakthrough in the field of Terahertz radiation has triggered new applications in biology and biomedicine. Particularly, biological applications are based on the specific spectroscopic fingerprints of biological matter in this spectral region. Historically with the discovery of new electromagnetic wave spectrum, we have always discovered new medical diagnostic imaging systems. The use of terahertz wave was not realized due to the absence of useful terahertz sources. Now after successful generation of THz waves, it is reported that a great potential for THz wave exists for its resonance with bio-molecules. There are many challenging issues such as development of THz passive and active instrumentations, understanding of THz-Bio interaction for THz spectroscopy, THz-Bio nonlinear phenomena and safety guideline, and THz imaging systems. Eventually the deeper understanding of THz-Bio interaction and novel THz systems enable us to develop powerful THz biomedical imaging systems which can contr...

  13. Biomedical Applications of Terahertz Spectroscopy and Imaging.

    Science.gov (United States)

    Yang, Xiang; Zhao, Xiang; Yang, Ke; Liu, Yueping; Liu, Yu; Fu, Weiling; Luo, Yang

    2016-10-01

    Terahertz (THz=10(12)Hz) radiation has attracted wide attention for its unprecedented sensing ability and its noninvasive and nonionizing properties. Tremendous strides in THz instrumentation have prompted impressive breakthroughs in THz biomedical research. Here, we review the current state of THz spectroscopy and imaging in various biomedical applications ranging from biomolecules, including DNA/RNA, amino acids/peptides, proteins, and carbohydrates, to cells and tissues. We also address the potential biological effects of THz radiation during its biological applications and propose future prospects for this cutting-edge technology.

  14. Illumination Correction on Biomedical Images

    OpenAIRE

    Edoardo Ardizzone; Roberto Pirrone; Orazio Gambino; Salvatore Vitabile

    2014-01-01

    RF-Inhomogeneity Correction (aka bias) artifact is an important research field in Magnetic Resonance Imaging (MRI). Bias corrupts MR images altering their illumination even though they are acquired with the most recent scanners. Homomorphic Unsharp Masking (HUM) is a filtering technique aimed at correcting illumination inhomogeneity, but it produces a halo around the edges as a side effect. In this paper a novel correction scheme based on HUM is proposed to correct the artifact mentioned abov...

  15. Biomedical Imaging and Sensing using Flatbed Scanners

    OpenAIRE

    Göröcs, Zoltán; Ozcan, Aydogan

    2014-01-01

    In this Review, we provide an overview of flatbed scanner based biomedical imaging and sensing techniques. The extremely large imaging field-of-view (e.g., ~600–700 cm2) of these devices coupled with their cost-effectiveness provide unique opportunities for digital imaging of samples that are too large for regular optical microscopes, and for collection of large amounts of statistical data in various automated imaging or sensing tasks. Here we give a short introduction to the basic features o...

  16. Modeling and control in the biomedical sciences

    CERN Document Server

    Banks, H T

    1975-01-01

    These notes are based on (i) a series of lectures that I gave at the 14th Biennial Seminar of the Canadian Mathematical Congress held at the University of Western Ontario August 12-24, 1973 and (li) some of my lectures in a modeling course that I have cotaught in the Division of Bio-Medical Sciences at Brown during the past several years. An earlier version of these notes appeared in the Center for Dynamical Systems Lectures Notes series (CDS LN 73-1, November 1973). I have in this revised and extended version of those earlier notes incorporated a number of changes based both on classroom experience and on my research efforts with several colleagues during the intervening period. The narrow viewpoint of the present notes (use of optimization and control theory in biomedical problems) reflects more the scope of the CMC lectures given in August, 1973 than the scope of my own interests. Indeed, my real interests have included the modeling process itself as well as the contributions made by investiga­ tors who e...

  17. 1st International Conference on Computational and Experimental Biomedical Sciences

    CERN Document Server

    Jorge, RM

    2015-01-01

    This book contains the full papers presented at ICCEBS 2013 – the 1st International Conference on Computational and Experimental Biomedical Sciences, which was organized in Azores, in October 2013. The included papers present and discuss new trends in those fields, using several methods and techniques, including active shape models, constitutive models, isogeometric elements, genetic algorithms, level sets, material models, neural networks, optimization, and the finite element method, in order to address more efficiently different and timely applications involving biofluids, computer simulation, computational biomechanics, image based diagnosis, image processing and analysis, image segmentation, image registration, scaffolds, simulation, and surgical planning. The main audience for this book consists of researchers, Ph.D students, and graduate students with multidisciplinary interests related to the areas of artificial intelligence, bioengineering, biology, biomechanics, computational fluid dynamics, comput...

  18. BIG: a Grid Portal for Biomedical Data and Images

    Directory of Open Access Journals (Sweden)

    Giovanni Aloisio

    2004-06-01

    Full Text Available Modern management of biomedical systems involves the use of many distributed resources, such as high performance computational resources to analyze biomedical data, mass storage systems to store them, medical instruments (microscopes, tomographs, etc., advanced visualization and rendering tools. Grids offer the computational power, security and availability needed by such novel applications. This paper presents BIG (Biomedical Imaging Grid, a Web-based Grid portal for management of biomedical information (data and images in a distributed environment. BIG is an interactive environment that deals with complex user's requests, regarding the acquisition of biomedical data, the "processing" and "delivering" of biomedical images, using the power and security of Computational Grids.

  19. The Impact of Regulating Social Science Research with Biomedical Regulations

    Science.gov (United States)

    Durosinmi, Brenda Braxton

    2011-01-01

    The Impact of Regulating Social Science Research with Biomedical Regulations Since 1974 Federal regulations have governed the use of human subjects in biomedical and social science research. The regulations are known as the Federal Policy for the Protection of Human Subjects, and often referred to as the "Common Rule" because 18 Federal…

  20. Science gateways for biomedical big data analysis

    NARCIS (Netherlands)

    S. Shahand

    2015-01-01

    Biomedical researchers are facing data deluge challenges such as dealing with large volume of complex heterogeneous data and complex and computationally demanding data processing methods. Such scale and complexity of biomedical research requires multi-disciplinary collaboration between scientists fr

  1. New frontiers in biomedical science and engineering during 2014-2015.

    Science.gov (United States)

    Liu, Feng; Lee, Dong-Hoon; Lagoa, Ricardo; Kumar, Sandeep

    2015-01-01

    The International Conference on Biomedical Engineering and Biotechnology (ICBEB) is an international meeting held once a year. This, the fourth International Conference on Biomedical Engineering and Biotechnology (ICBEB2015), will be held in Shanghai, China, during August 18th-21st, 2015. This annual conference intends to provide an opportunity for researchers and practitioners at home and abroad to present the most recent frontiers and future challenges in the fields of biomedical science, biomedical engineering, biomaterials, bioinformatics and computational biology, biomedical imaging and signal processing, biomechanical engineering and biotechnology, etc. The papers published in this issue are selected from this Conference, which witness the advances in biomedical engineering and biotechnology during 2014-2015.

  2. Big biomedical data as the key resource for discovery science.

    Science.gov (United States)

    Toga, Arthur W; Foster, Ian; Kesselman, Carl; Madduri, Ravi; Chard, Kyle; Deutsch, Eric W; Price, Nathan D; Glusman, Gustavo; Heavner, Benjamin D; Dinov, Ivo D; Ames, Joseph; Van Horn, John; Kramer, Roger; Hood, Leroy

    2015-11-01

    Modern biomedical data collection is generating exponentially more data in a multitude of formats. This flood of complex data poses significant opportunities to discover and understand the critical interplay among such diverse domains as genomics, proteomics, metabolomics, and phenomics, including imaging, biometrics, and clinical data. The Big Data for Discovery Science Center is taking an "-ome to home" approach to discover linkages between these disparate data sources by mining existing databases of proteomic and genomic data, brain images, and clinical assessments. In support of this work, the authors developed new technological capabilities that make it easy for researchers to manage, aggregate, manipulate, integrate, and model large amounts of distributed data. Guided by biological domain expertise, the Center's computational resources and software will reveal relationships and patterns, aiding researchers in identifying biomarkers for the most confounding conditions and diseases, such as Parkinson's and Alzheimer's.

  3. BIG: a Grid Portal for Biomedical Data and Images

    OpenAIRE

    Giovanni Aloisio; Maria Cristina Barba; Euro Blasi; Massimo Cafaro; Sandro Fiore; Maria Mirto

    2004-01-01

    Modern management of biomedical systems involves the use of many distributed resources, such as high performance computational resources to analyze biomedical data, mass storage systems to store them, medical instruments (microscopes, tomographs, etc.), advanced visualization and rendering tools. Grids offer the computational power, security and availability needed by such novel applications. This paper presents BIG (Biomedical Imaging Grid), a Web-based Grid portal for management of biomedic...

  4. New methodology in biomedical science: methodological errors in classical science.

    Science.gov (United States)

    Skurvydas, Albertas

    2005-01-01

    The following methodological errors are observed in biomedical sciences: paradigmatic ones; those of exaggerated search for certainty; science dehumanisation; deterministic and linearity; those of making conclusions; errors of reductionism or quality decomposition as well as exaggerated enlargement; errors connected with discarding odd; unexpected or awkward facts; those of exaggerated mathematization; isolation of science; the error of "common sense"; Ceteris Paribus law's ("other things being equal" laws) error; "youth" and common sense; inflexibility of criteria of the truth; errors of restricting the sources of truth and ways of searching for truth; the error connected with wisdom gained post factum; the errors of wrong interpretation of research mission; "laziness" to repeat the experiment as well as the errors of coordination of errors. One of the basic aims for the present-day scholars of biomedicine is, therefore, mastering the new non-linear, holistic, complex way of thinking that will, undoubtedly, enable one to make less errors doing research. The aim of "scientific travelling" will be achieved with greater probability if the "travelling" itself is performed with great probability. PMID:15687745

  5. Proceedings of the international society for optical engineering biomedical image processing 2

    Energy Technology Data Exchange (ETDEWEB)

    Bovik, A.G.; Howard, V.

    1991-01-01

    This book contains the proceedings of biomedical image processing. Topics covered include: Filtering and reconstruction of biomedical images; analysis, classification and recognition of biomedical images; and 3-D microscopy.

  6. 76 FR 53690 - National Institute of Biomedical Imaging and Bioengineering; Notice of Closed Meeting

    Science.gov (United States)

    2011-08-29

    ... HUMAN SERVICES National Institutes of Health National Institute of Biomedical Imaging and Bioengineering... personal privacy. Name of Committee: National Institute of Biomedical Imaging and Bioengineering Special... Review Officer, National Institute of Biomedical Imaging and Bioengineering, National Institutes...

  7. 78 FR 76632 - National Institute of Biomedical Imaging and Bioengineering; Notice of Closed Meeting

    Science.gov (United States)

    2013-12-18

    ... HUMAN SERVICES National Institutes of Health National Institute of Biomedical Imaging and Bioengineering... personal privacy. Name of Committee: National Institute of Biomedical Imaging and Bioengineering Special... Review Officer, National Institute of Biomedical Imaging and Bioengineering, 6707 Democracy...

  8. 77 FR 50516 - National Institute of Biomedical Imaging and Bioengineering; Notice of Closed Meeting

    Science.gov (United States)

    2012-08-21

    ... HUMAN SERVICES National Institutes of Health National Institute of Biomedical Imaging and Bioengineering... personal privacy. Name of Committee: National Institute of Biomedical Imaging and Bioengineering Special...., Scientific Review Officer, National Institute of Biomedical Imaging, And Bioengineering, National...

  9. 76 FR 572 - National Institute of Biomedical Imaging and Bioengineering; Notice of Closed Meeting

    Science.gov (United States)

    2011-01-05

    ... HUMAN SERVICES National Institutes of Health National Institute of Biomedical Imaging and Bioengineering... personal privacy. Name of Committee: National Institute of Biomedical Imaging and Bioengineering Special..., PhD, Scientific Review Officer, National Institute of Biomedical Imaging and Bioengineering,...

  10. 78 FR 66373 - National Institute of Biomedical Imaging and Bioengineering; Notice of Closed Meeting

    Science.gov (United States)

    2013-11-05

    ... HUMAN SERVICES National Institutes of Health National Institute of Biomedical Imaging and Bioengineering... personal privacy. Name of Committee: National Institute of Biomedical Imaging and Bioengineering Special... Grossman, DDS, Scientific Review Officer, National Institute of Biomedical Imaging and Bioengineering,...

  11. 77 FR 71605 - National Institute of Biomedical Imaging and Bioengineering; Notice of Closed Meetings

    Science.gov (United States)

    2012-12-03

    ... HUMAN SERVICES National Institutes of Health National Institute of Biomedical Imaging and Bioengineering... personal privacy. Name of Committee: National Institute of Biomedical Imaging and Bioengineering Special... Biomedical Imaging and Bioengineering Special Emphasis Panel; MSM Program Review. Date: February 26,...

  12. 78 FR 3903 - National Institute of Biomedical Imaging and Bioengineering; Notice of Closed Meetings

    Science.gov (United States)

    2013-01-17

    ... HUMAN SERVICES National Institutes of Health National Institute of Biomedical Imaging and Bioengineering... personal privacy. Name of Committee: National Institute of Biomedical Imaging and Bioengineering Special... Biomedical Imaging and, Bioengineering, National Institutes of Health, 6707 Democracy Boulevard, Room...

  13. 77 FR 13347 - National Institute of Biomedical Imaging and Bioengineering; Notice of Closed Meetings

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    2012-03-06

    ... HUMAN SERVICES National Institutes of Health National Institute of Biomedical Imaging and Bioengineering... personal privacy. Name of Committee: National Institute of Biomedical Imaging and Bioengineering Special... Committee: National Institute of Biomedical Imaging and Bioengineering Special Emphasis Panel;...

  14. 77 FR 2987 - National Institute of Biomedical Imaging and Bioengineering; Notice of Closed Meeting

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    2012-01-20

    ... HUMAN SERVICES National Institutes of Health National Institute of Biomedical Imaging and Bioengineering... personal privacy. Name of Committee: National Institute of Biomedical Imaging and Bioengineering Special..., National Institute of Biomedical Imaging and Bioengineering, National Institutes of Health, 6707...

  15. 78 FR 9066 - National Institute of Biomedical Imaging and Bioengineering; Notice of Closed Meeting

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    2013-02-07

    ... HUMAN SERVICES National Institutes of Health National Institute of Biomedical Imaging and Bioengineering... personal privacy. Name of Committee: National Institute of Biomedical Imaging and Bioengineering Special... of Biomedical Imaging and Bioengineering, National Institutes of Health, 6707 Democracy...

  16. 78 FR 3009 - National Institute of Biomedical Imaging and Bioengineering; Notice of Closed Meeting

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    2013-01-15

    ... HUMAN SERVICES National Institutes of Health National Institute of Biomedical Imaging and Bioengineering... personal privacy. Name of Committee: National Institute of Biomedical Imaging and Bioengineering Special... Biomedical Imaging and Bioengineering, National Institutes of Health, 6707 Democracy Boulevard, Suite...

  17. 78 FR 37557 - National Institute of Biomedical Imaging and Bioengineering; Notice of Closed Meetings

    Science.gov (United States)

    2013-06-21

    ... HUMAN SERVICES National Institutes of Health National Institute of Biomedical Imaging and Bioengineering... personal privacy. Name of Committee: National Institute of Biomedical Imaging and Bioengineering Special...: Ruth Grossman, DDS, Scientific Review Officer, National Institute of Biomedical Imaging...

  18. 78 FR 31953 - National Institute of Biomedical Imaging and Bioengineering; Notice of Closed Meetings

    Science.gov (United States)

    2013-05-28

    ... HUMAN SERVICES National Institutes of Health National Institute of Biomedical Imaging and Bioengineering... personal privacy. Name of Committee: National Institute of Biomedical Imaging and Bioengineering Special...., Scientific Review Officer, National Institute of Biomedical Imaging and Bioengineering, National...

  19. 77 FR 17080 - National Institute of Biomedical Imaging and Bioengineering; Notice of Closed Meeting

    Science.gov (United States)

    2012-03-23

    ... HUMAN SERVICES National Institutes of Health National Institute of Biomedical Imaging and Bioengineering... personal privacy. Name of Committee: National Institute of Biomedical Imaging and Bioengineering Special... Officer, National Institute of Biomedical Imaging and Bioengineering, National Institutes of Health,...

  20. 75 FR 61769 - National Institute of Biomedical Imaging and Bioengineering; Notice of Closed Meeting

    Science.gov (United States)

    2010-10-06

    ... HUMAN SERVICES National Institutes of Health National Institute of Biomedical Imaging and Bioengineering... personal privacy. Name of Committee: National Institute of Biomedical Imaging and Bioengineering Special... Institute of Biomedical Imaging and Bioengineering, National Institutes of Health, 6707 Democracy...

  1. 76 FR 370 - National Institute of Biomedical Imaging and Bioengineering; Notice of Closed Meeting

    Science.gov (United States)

    2011-01-04

    ... HUMAN SERVICES National Institutes of Health National Institute of Biomedical Imaging and Bioengineering... personal privacy. Name of Committee: National Institute of Biomedical Imaging and Bioengineering Special... Person: Manana Sukhareva, Ph.D., Scientific Review Officer, National Institute of Biomedical Imaging...

  2. 78 FR 46995 - National Institute of Biomedical Imaging and Bioengineering; Notice of Closed Meeting

    Science.gov (United States)

    2013-08-02

    ... HUMAN SERVICES National Institutes of Health National Institute of Biomedical Imaging and Bioengineering... personal privacy. Name of Committee: National Institute of Biomedical Imaging and Bioengineering Special... Biomedical Imaging, and Bioengineering, 6707 Democracy Boulevard, Suite 959, Bethesda, MD 20892,...

  3. 77 FR 58146 - National Institute of Biomedical Imaging and Bioengineering; Notice of Closed Meeting

    Science.gov (United States)

    2012-09-19

    ... HUMAN SERVICES National Institutes of Health National Institute of Biomedical Imaging and Bioengineering... personal privacy. Name of Committee: National Institute of Biomedical Imaging and Bioengineering Special...: John K. Hayes, Ph.D., Scientific Review Officer, National Institute of Biomedical Imaging...

  4. 77 FR 74675 - National Institute of Biomedical Imaging and Bioengineering; Notice of Closed Meetings

    Science.gov (United States)

    2012-12-17

    ... HUMAN SERVICES National Institutes of Health National Institute of Biomedical Imaging and Bioengineering... personal privacy. Name of Committee: National Institute of Biomedical Imaging and Bioengineering Special... Officer, National Institute of Biomedical Imaging and Bioengineering, 6707 Democracy Boulevard, Room...

  5. 76 FR 58023 - National Institute of Biomedical Imaging and Bioengineering; Notice of Closed Meetings

    Science.gov (United States)

    2011-09-19

    ... HUMAN SERVICES National Institutes of Health National Institute of Biomedical Imaging and Bioengineering... personal privacy. Name of Committee: National Institute of Biomedical Imaging and Bioengineering Special... Officer, National Institute of Biomedical Imaging and Bioengineering, National Institutes of Health,...

  6. 78 FR 25752 - National Institute of Biomedical Imaging and Bioengineering; Notice of Closed Meetings

    Science.gov (United States)

    2013-05-02

    ... HUMAN SERVICES National Institutes of Health National Institute of Biomedical Imaging and Bioengineering... personal privacy. Name of Committee: National Institute of Biomedical Imaging and Bioengineering Special... Officer, National Institute of Biomedical Imaging and Bioengineering, National Institutes of Health,...

  7. 78 FR 67373 - National Institute of Biomedical Imaging and Bioengineering; Notice of Closed Meeting

    Science.gov (United States)

    2013-11-12

    ... HUMAN SERVICES National Institutes of Health National Institute of Biomedical Imaging and Bioengineering... personal privacy. Name of Committee: National Institute of Biomedical Imaging and Bioengineering Special... Grossman, DDS, Scientific Review Officer, National Institute of Biomedical Imaging and Bioengineering,...

  8. 78 FR 11660 - National Institute of Biomedical Imaging And Bioengineering; Notice of Closed Meeting

    Science.gov (United States)

    2013-02-19

    ... HUMAN SERVICES National Institutes of Health National Institute of Biomedical Imaging And Bioengineering... personal privacy. Name of Committee: National Institute of Biomedical Imaging and Bioengineering Special.... Hayes, Ph.D., Scientific Review Officer, National Institute of Biomedical Imaging and...

  9. 76 FR 76744 - National Institute of Biomedical Imaging and Bioengineering; Notice of Closed Meeting

    Science.gov (United States)

    2011-12-08

    ... HUMAN SERVICES National Institutes of Health National Institute of Biomedical Imaging and Bioengineering... personal privacy. Name of Committee: National Institute of Biomedical Imaging and Bioengineering Special... Biomedical Imaging and Bioengineering, National Institutes of Health, 6707 Democracy Boulevard, Suite...

  10. 77 FR 25487 - National Institute of Biomedical Imaging and Bioengineering; Notice of Closed Meeting

    Science.gov (United States)

    2012-04-30

    ... HUMAN SERVICES National Institutes of Health National Institute of Biomedical Imaging and Bioengineering... personal privacy. Name of Committee: National Institute of Biomedical Imaging and Bioengineering Special... Review Officer, National Institute of Biomedical Imaging and Bioengineering, National Institutes...

  11. 78 FR 67375 - National Institute of Biomedical Imaging and Bioengineering; Notice of Closed Meeting

    Science.gov (United States)

    2013-11-12

    ... HUMAN SERVICES National Institutes of Health National Institute of Biomedical Imaging and Bioengineering... personal privacy. Name of Committee: National Institute of Biomedical Imaging and Bioengineering Special... Grossman, DDS, Scientific Review Officer, National Institute of Biomedical Imaging and Bioengineering,...

  12. 77 FR 51544 - National Institute of Biomedical Imaging and Bioengineering; Notice of Closed Meeting

    Science.gov (United States)

    2012-08-24

    ... HUMAN SERVICES National Institutes of Health National Institute of Biomedical Imaging and Bioengineering... personal privacy. Name of Committee: National Institute of Biomedical Imaging and Bioengineering Special... Institute of Biomedical Imaging, and Bioengineering, National Institutes of Health, 6707 Democracy...

  13. 77 FR 54584 - National Institute of Biomedical Imaging and Bioengineering; Notice of Closed Meeting

    Science.gov (United States)

    2012-09-05

    ... HUMAN SERVICES National Institutes of Health National Institute of Biomedical Imaging and Bioengineering... personal privacy. Name of Committee: National Institute of Biomedical Imaging and Bioengineering Special... Review Officer, National Institute of Biomedical Imaging and Bioengineering, National Institutes...

  14. 78 FR 52938 - National Institute of Biomedical Imaging and Bioengineering; Notice of Closed Meeting

    Science.gov (United States)

    2013-08-27

    ... HUMAN SERVICES National Institutes of Health National Institute of Biomedical Imaging and Bioengineering... personal privacy. Name of Committee: National Institute of Biomedical Imaging and Bioengineering Special....D., Scientific Review Officer, National Institute of Biomedical Imaging and Bioengineering,...

  15. 78 FR 54259 - National Institute of Biomedical Imaging and Bioengineering; Notice of Closed Meeting

    Science.gov (United States)

    2013-09-03

    ... HUMAN SERVICES National Institutes of Health National Institute of Biomedical Imaging and Bioengineering... personal privacy. Name of Committee: National Institute of Biomedical Imaging and Bioengineering Special..., Ph.D., Scientific Review Officer, National Institute of Biomedical Imaging, and Bioengineering,...

  16. 76 FR 23326 - National Institute of Biomedical Imaging and Bioengineering; Notice of Closed Meeting

    Science.gov (United States)

    2011-04-26

    ... HUMAN SERVICES National Institutes of Health National Institute of Biomedical Imaging and Bioengineering... personal privacy. Name of Committee: National Institute of Biomedical Imaging and Bioengineering Special..., Scientific Review Officer, National Institute of Biomedical Imaging and Bioengineering, National...

  17. 77 FR 24972 - National Institute of Biomedical Imaging and Bioengineering Notice of Closed Meeting

    Science.gov (United States)

    2012-04-26

    ... HUMAN SERVICES National Institutes of Health National Institute of Biomedical Imaging and Bioengineering... Institute of Biomedical Imaging and Bioengineering. The meeting will be closed to the public as indicated... National Institute of Biomedical Imaging and Bioengineering, including consideration of...

  18. 78 FR 10185 - National Institute of Biomedical Imaging and Bioengineering; Notice of Closed Meeting

    Science.gov (United States)

    2013-02-13

    ... HUMAN SERVICES National Institutes of Health National Institute of Biomedical Imaging and Bioengineering... personal privacy. Name of Committee: National Institute of Biomedical Imaging and Bioengineering Special... Biomedical Imaging and Bioengineering, National Institutes of Health, 6707 Democracy Boulevard, Room...

  19. 75 FR 25273 - National Institute of Biomedical Imaging and Bioengineering; Notice of Closed Meeting

    Science.gov (United States)

    2010-05-07

    ... HUMAN SERVICES National Institutes of Health National Institute of Biomedical Imaging and Bioengineering... personal privacy. Name of Committee: National Institute of Biomedical Imaging and Bioengineering Special... Officer, National Institute of Biomedical Imaging & Bioeng, National Institutes of Health, 6707...

  20. 78 FR 35041 - National Institute of Biomedical Imaging and Bioengineering; Notice of Closed Meeting

    Science.gov (United States)

    2013-06-11

    ... HUMAN SERVICES National Institutes of Health National Institute of Biomedical Imaging and Bioengineering... personal privacy. Name of Committee: National Institute of Biomedical Imaging and Bioengineering Special... Officer, National Institute of Biomedical Imaging and Bioengineering, 6707 Democracy Boulevard, Room...

  1. 77 FR 54581 - National Institute of Biomedical Imaging and Bioengineering; Notice of Closed Meeting

    Science.gov (United States)

    2012-09-05

    ... HUMAN SERVICES National Institutes of Health National Institute of Biomedical Imaging and Bioengineering... personal privacy. Name of Committee: National Institute of Biomedical Imaging and Bioengineering Special... of Biomedical Imaging and Bioengineering, National Institutes of Health, 6707 Democracy...

  2. 77 FR 27784 - National Institute of Biomedical Imaging and Bioengineering; Notice of Closed Meeting

    Science.gov (United States)

    2012-05-11

    ... HUMAN SERVICES National Institutes of Health National Institute of Biomedical Imaging and Bioengineering... personal privacy. Name of Committee: National Institute of Biomedical Imaging and Bioengineering Special... Biomedical Imaging and Bioengineering, 6707 Democracy Boulevard, Room 960, Bethesda, MD 20892,...

  3. 78 FR 45254 - National Institute of Biomedical Imaging and Bioengineering; Notice of Closed Meeting

    Science.gov (United States)

    2013-07-26

    ... HUMAN SERVICES National Institutes of Health National Institute of Biomedical Imaging and Bioengineering... personal privacy. Name of Committee: National Institute of Biomedical Imaging and Bioengineering Special...., Scientific Review Officer, National Institute of Biomedical Imaging and Bioengineering, 6707...

  4. 78 FR 24763 - National Institute of Biomedical Imaging and Bioengineering; Notice of Closed Meeting

    Science.gov (United States)

    2013-04-26

    ... HUMAN SERVICES National Institutes of Health National Institute of Biomedical Imaging and Bioengineering... Institute of Biomedical Imaging and Bioengineering. The meeting will be closed to the public as indicated... National Institute of Biomedical Imaging and Bioengineering, including consideration of...

  5. Terahertz Imaging for Biomedical Applications Pattern Recognition and Tomographic Reconstruction

    CERN Document Server

    Yin, Xiaoxia; Abbott, Derek

    2012-01-01

    Terahertz Imaging for Biomedical Applications: Pattern Recognition and Tomographic Reconstruction presents the necessary algorithms needed to assist screening, diagnosis, and treatment, and these algorithms will play a critical role in the accurate detection of abnormalities present in biomedical imaging. Terahertz biomedical imaging has become an area of interest due to its ability to simultaneously acquire both image and spectral information. Terahertz imaging systems are being commercialized with an increasing number of trials performed in a biomedical setting. Terahertz tomographic imaging and detection technology contributes to the ability to identify opaque objects with clear boundaries,and would be useful to both in vivo and ex vivo environments. This book also: Introduces terahertz radiation techniques and provides a number of topical examples of signal and image processing, as well as machine learning Presents the most recent developments in an emerging field, terahertz radiation Utilizes new methods...

  6. An unsupervised strategy for biomedical image segmentation

    Directory of Open Access Journals (Sweden)

    Roberto Rodríguez

    2010-09-01

    Full Text Available Roberto Rodríguez1, Rubén Hernández21Digital Signal Processing Group, Institute of Cybernetics, Mathematics, and Physics, Havana, Cuba; 2Interdisciplinary Professional Unit of Engineering and Advanced Technology, IPN, MexicoAbstract: Many segmentation techniques have been published, and some of them have been widely used in different application problems. Most of these segmentation techniques have been motivated by specific application purposes. Unsupervised methods, which do not assume any prior scene knowledge can be learned to help the segmentation process, and are obviously more challenging than the supervised ones. In this paper, we present an unsupervised strategy for biomedical image segmentation using an algorithm based on recursively applying mean shift filtering, where entropy is used as a stopping criterion. This strategy is proven with many real images, and a comparison is carried out with manual segmentation. With the proposed strategy, errors less than 20% for false positives and 0% for false negatives are obtained.Keywords: segmentation, mean shift, unsupervised segmentation, entropy

  7. Biomedical Applications of NASA Science and Technology

    Science.gov (United States)

    Brown, James N., Jr.

    1968-01-01

    During the period 15 September 1968 to 14 December 1968, the NASA supported Biomedical Application Team at the Research Triangle Institute has identified 6 new problems, performed significant activities on 15 of the active problems identified previously, performed 5 computer searches of the NASA aerospace literature, and maintained one current awareness search. As a partial result of these activities, one technology transfer was accomplished. As a part of continuing problem review, 13 problems were classified inactive. Activities during the quarter involved all phases of team activity with respect to biomedical problems. As has been observed in preceding years, it has been exceedingly difficult to arrange meetings with medical investigators during the fourth quarter of the calendar year. This is a result of a combination of factors. Teaching requirements, submission of grant applications and holidays are the most significant factors involved. As a result, the numbers of new problems identified and of transfers and potential transfers are relatively low during this quarter. Most of our activities have thus been directed toward obtaining information related to problems already identified. Consequently, during the next quarter we will follow up on these activities with the expectation that transfers will be accomplished on a number of them. In addition, the normal availability of researchers to the team is expected to be restored during this quarter, permitting an increase in new problem identification activities as well as follow-up with other researchers on old problems. Another activity scheduled for the next quarter is consultation with several interested biomedical equipment manufacturers to explore means of effective interaction between the Biomedical Application Team and these companies.

  8. 面向生物医学影像e-Science平台的审计监控系统%An Auditing and Monitoring System for Biomedical Image E-Science Platform

    Institute of Scientific and Technical Information of China (English)

    王土生; 杨媛媛; 张建国

    2013-01-01

    During Research in biomedical imaging and clinical applications for major diseases, it is often necessary to involve scientist of basic medicine, clinical medicine, physics and biomedical engineering for collaborative research. To do this, we built a grid-based biomedical image e-Science platform, providing data sharing and exchange between the different institutions. Due to the distribution of system and node heterogeneity, it is difficult to avoid the system hardware and software failures. Therefore, this paper designed an XMPP-based audit and monitoring system, which supports both real-time monitoring of each host, and auditing of the data business happening in e-Science. The system is running with e-Science platform, showing good convenient and soundness.%在面向重大疾病的生物医学成像与临床应用等研究中,常常需要包括基础医学、临床医学、物理学和生物医学工程多学科的科研工作者进行协同交互。为此采用网格技术构建了生物医学影像e-Science平台,实现了跨机构之间大数据的快速共享与交换。由于系统的分布性和节点的异构性,难以避免会碰到系统的软硬件故障。因此,设计了一种基于XMPP协议的审计监控系统,既对e-Science的各个主机系统资源进行实时监测,又对平台中数据业务进行审计跟踪。系统最终被部署应用在e-Science平台,具有良好的便捷性和稳健性。

  9. 75 FR 35820 - National Institute of Biomedical Imaging and Bioengineering; Notice of Closed Meeting

    Science.gov (United States)

    2010-06-23

    ... HUMAN SERVICES National Institutes of Health National Institute of Biomedical Imaging and Bioengineering... personal privacy. Name of Committee: National Institute of Biomedical Imaging and Bioengineering Special..., ARRA Related Biomedical Research and Research Support Awards, National Institutes of Health, HHS)...

  10. 75 FR 39547 - National Institute of Biomedical Imaging and Bioengineering; Notice of Closed Meeting

    Science.gov (United States)

    2010-07-09

    ... HUMAN SERVICES National Institutes of Health National Institute of Biomedical Imaging and Bioengineering... personal privacy. Name of Committee: National Institute of Biomedical Imaging and Bioengineering Special.... Contact Person: Ruth Grossman, DDS, Scientific Review Officer, National Institute of Biomedical...

  11. 76 FR 40922 - National Institute of Biomedical Imaging and Bioengineering; Notice of Closed Meeting

    Science.gov (United States)

    2011-07-12

    ... HUMAN SERVICES National Institutes of Health National Institute of Biomedical Imaging and Bioengineering... personal privacy. Name of Committee: National Institute of Biomedical Imaging and Bioengineering Special.... Contact Person: Ruth Grossman, DDS, Scientific Review Officer, National Institute of Biomedical...

  12. 76 FR 69748 - National Institute of Biomedical Imaging and Bioengineering; Notice of Closed Meeting

    Science.gov (United States)

    2011-11-09

    ... HUMAN SERVICES National Institutes of Health National Institute of Biomedical Imaging and Bioengineering... personal privacy. Name of Committee: National Institute of Biomedical Imaging and Bioengineering Special... Officer, National Institute of Biomedical Imagin and Bioengineering, National Institutes of...

  13. 75 FR 15715 - National Institute of Biomedical Imaging and Bioengineering; Notice of Closed Meeting

    Science.gov (United States)

    2010-03-30

    ... HUMAN SERVICES National Institutes of Health National Institute of Biomedical Imaging and Bioengineering... personal privacy. Name of Committee: National Institute of Biomedical Imaging and Bioengineering Special.... Contact Person: Ruth Grossman, DDS, Scientific Review Officer, National Institute of Biomedical...

  14. Evaluation of Biomedical Science Students Use and Perceptions of Podcasting

    Science.gov (United States)

    Smith, Katie; Morris, Neil P.

    2014-01-01

    The use of podcasting in higher education has escalated in recent years. The aim of this case study was to analyse undergraduate student use and perceptions of lecture audio recordings in the School of Biomedical Sciences at the University of Leeds. Students completed an online survey over a two-week period based on their use of lecture audio…

  15. Biomedical engineering and nanotechnology

    International Nuclear Information System (INIS)

    This book is predominantly a compilation of papers presented in the conference which is focused on the development in biomedical materials, biomedical devises and instrumentation, biomedical effects of electromagnetic radiation, electrotherapy, radiotherapy, biosensors, biotechnology, bioengineering, tissue engineering, clinical engineering and surgical planning, medical imaging, hospital system management, biomedical education, biomedical industry and society, bioinformatics, structured nanomaterial for biomedical application, nano-composites, nano-medicine, synthesis of nanomaterial, nano science and technology development. The papers presented herein contain the scientific substance to suffice the academic directivity of the researchers from the field of biomedicine, biomedical engineering, material science and nanotechnology. Papers relevant to INIS are indexed separately

  16. Publications in biomedical and environmental sciences programs, 1980

    International Nuclear Information System (INIS)

    This bibliography contains 690 references to articles in journals, books, and reports published in the subject area of biomedical and environmental sciences during 1980. There are 529 references to articles published in journals and books and 161 references to reports. Staff members in the Biomedical and Environmental Sciences divisions have other publications not included in this bibliography; for example, theses, book reviews, abstracts published in journals or symposia proceedings, pending journal publications and reports such as monthly and bimonthly progress reports, contractor reports, and reports for internal distribution. This document is sorted by the division, and then alphabetically by author. The sorting by divisions separates the references by subject area in a simple way. The divisions represented in the order that they appear in the bibliography are Analytical Chemistry, Biology, Chemical Technology, Information R and D, Health and Safety Research, Energy, Environmental Sciences, and Computer Sciences

  17. Publications in biomedical and environmental sciences programs, 1980

    Energy Technology Data Exchange (ETDEWEB)

    Pfuderer, H.A.; Moody, J.B.

    1981-07-01

    This bibliography contains 690 references to articles in journals, books, and reports published in the subject area of biomedical and environmental sciences during 1980. There are 529 references to articles published in journals and books and 161 references to reports. Staff members in the Biomedical and Environmental Sciences divisions have other publications not included in this bibliography; for example, theses, book reviews, abstracts published in journals or symposia proceedings, pending journal publications and reports such as monthly and bimonthly progress reports, contractor reports, and reports for internal distribution. This document is sorted by the division, and then alphabetically by author. The sorting by divisions separates the references by subject area in a simple way. The divisions represented in the order that they appear in the bibliography are Analytical Chemistry, Biology, Chemical Technology, Information R and D, Health and Safety Research, Energy, Environmental Sciences, and Computer Sciences.

  18. Theory and experiment in biomedical science

    Science.gov (United States)

    Allen, Roland

    2012-10-01

    A physicist might regard a person as a collection of electrons and quarks, and a biologist might regard her as an assemblage of biochemical molecules. But according to some speakers at a recent Welch conference [1] biology is a branch of physics. Then biomedical research is a branch of applied physics. Even if one adopts a more modest perspective, it is still true that physics can contribute strongly to biomedical research. An example on the experimental side is the recent studies of G protein-coupled receptors (targeted by more than 50 percent of therapeutic drugs) using synchrotron radiation and nuclear magnetic resonance. On the theory side, one might classify models as microscopic (e.g., simulations of molecules, ions, or electrons), mesoscopic (e.g., simulations of pathways within a cell), or macroscopic (e.g., calculations of processes involving the whole body). We have recently introduced a new macroscopic method for estimating the biochemical response to pharmaceuticals, surgeries, or other medical interventions, and applied it in a simple model of the response to bariatric surgeries [2]. An amazing effect is that the most widely used bariatric surgery (Roux-en-Y-gastric bypass) usually leads to remission of type 2 diabetes in days, long before there is any significant weight loss (with further beneficial effects in the subsequent months and years). Our results confirm that this effect can be largely explained by the enhanced post-meal excretion of glucagon-like peptide 1 (GLP-1), an incretin that increases insulin secretion from the pancreas, but also suggest that other mechanisms are likely to be involved, possibly including an additional insulin-independent pathway for glucose transport into cells. [4pt] [1] Physical Biology, from Atoms to Medicine, edited by Ahmed H. Zewail (Imperial College Press, London, 2008).[0pt] [2] Roland E. Allen, Tyler D. Hughes, Jia Lerd Ng, Roberto D. Ortiz, Michel Abou Ghantous, Othmane Bouhali, Abdelilah Arredouani

  19. Foundations of image science

    CERN Document Server

    Barrett, Harrison H

    2013-01-01

    Winner of the 2006 Joseph W. Goodman Book Writing Award! A comprehensive treatment of the principles, mathematics, and statistics of image science In today's visually oriented society, images play an important role in conveying messages. From seismic imaging to satellite images to medical images, our modern society would be lost without images to enhance our understanding of our health, our culture, and our world. Foundations of Image Science presents a comprehensive treatment of the principles, mathematics, and st

  20. Biomedical science postdocs: an end to the era of expansion.

    Science.gov (United States)

    Garrison, Howard H; Justement, Louis B; Gerbi, Susan A

    2016-01-01

    After >3 decades of steady growth, the number of biological and medical science postdoctorates at doctoral degree-granting institutions recently began to decline. From 2010 through 2013, the most recent survey years, the postdoctoral population decreased from 40,970 to 38,719, a loss of 5.5%. This decline represents a notable departure from the previous long-standing increases in the number of postdoctorates in the biomedical workforce. The rate of contraction appears to be accelerating in the most recent survey years, and this has important implications for the biomedical workforce.

  1. 76 FR 1212 - Joint Biomedical Laboratory Research and Development and Clinical Science Research and...

    Science.gov (United States)

    2011-01-07

    ... AFFAIRS Joint Biomedical Laboratory Research and Development and Clinical Science Research and Development... Eligibility of the Joint Biomedical Laboratory Research and Development and Clinical Science Research and... areas of biomedical, behavioral and clinical science research. The panel meeting will be open to...

  2. Research-Doctorate Programs in the Biomedical Sciences: Selected Findings from the NRC Assessment

    Science.gov (United States)

    Lorden, Joan F., Ed.; Kuh, Charlotte V., Ed.; Voytuk, James A., Ed.

    2011-01-01

    "Research Doctorate Programs in the Biomedical Sciences: Selected Findings from the NRC Assessment" examines data on the biomedical sciences programs to gather additional insight about the talent, training environment, outcomes, diversity, and international participation in the biomedical sciences workforce. This report supports an earlier…

  3. 76 FR 79273 - Joint Biomedical Laboratory Research and Development and Clinical Science Research and...

    Science.gov (United States)

    2011-12-21

    ... AFFAIRS Joint Biomedical Laboratory Research and Development and Clinical Science Research and Development... Eligibility of the Joint Biomedical Laboratory Research and Development and Clinical Science Research and... biomedical, behavioral, and clinical science research. The panel meeting will be open to the public...

  4. Structural biology computing: Lessons for the biomedical research sciences.

    Science.gov (United States)

    Morin, Andrew; Sliz, Piotr

    2013-11-01

    The field of structural biology, whose aim is to elucidate the molecular and atomic structures of biological macromolecules, has long been at the forefront of biomedical sciences in adopting and developing computational research methods. Operating at the intersection between biophysics, biochemistry, and molecular biology, structural biology's growth into a foundational framework on which many concepts and findings of molecular biology are interpreted1 has depended largely on parallel advancements in computational tools and techniques. Without these computing advances, modern structural biology would likely have remained an exclusive pursuit practiced by few, and not become the widely practiced, foundational field it is today. As other areas of biomedical research increasingly embrace research computing techniques, the successes, failures and lessons of structural biology computing can serve as a useful guide to progress in other biomedically related research fields.

  5. Biomedical Engineering and Cognitive Science Secondary Science Curriculum Development: A Three Year Study

    Science.gov (United States)

    Klein, Stacy S.; Sherwood, Robert D.

    2005-01-01

    This study reports on a multi-year effort to create and evaluate cognitive-based curricular materials for secondary school science classrooms. A team of secondary teachers, educational researchers, and academic biomedical engineers developed a series of curriculum units that are based in biomedical engineering for secondary level students in…

  6. Effective Computer Aided Instruction in Biomedical Science

    OpenAIRE

    Hause, Lawrence L.

    1985-01-01

    A menu-driven Computer Aided Instruction (CAI) package was integrated with word processing and effectively applied in five curricula at the Medical College of Wisconsin. Integration with word processing facilitates the ease of CAI development by instructors and was found to be the most important step in the development of CAI. CAI modules were developed and are currently used to reinforce lectures in medical pathology, laboratory quality control, computer programming and basic science reviews...

  7. Imaging Sciences Workshop Proceedings

    Energy Technology Data Exchange (ETDEWEB)

    Candy, J.V.

    1996-11-21

    This report contains the proceedings of the Imaging Sciences Workshop sponsored by C.A.S.LS., the Center for Advanced Signal & Image Sciences. The Center, established primarily to provide a forum where researchers can freely exchange ideas on the signal and image sciences in a comfortable intellectual environment, has grown over the last two years with the opening of a Reference Library (located in Building 272). The Technical Program for the 1996 Workshop include a variety of efforts in the Imaging Sciences including applications in the Microwave Imaging, highlighted by the Micro-Impulse Radar (MIR) system invented at LLNL, as well as other applications in this area. Special sessions organized by various individuals in Speech, Acoustic Ocean Imaging, Radar Ocean Imaging, Ultrasonic Imaging, and Optical Imaging discuss various applica- tions of real world problems. For the more theoretical, sessions on Imaging Algorithms and Computed Tomography were organized as well as for the more pragmatic featuring a session on Imaging Systems.

  8. Publications in biomedical and environmental sciences programs, 1982

    International Nuclear Information System (INIS)

    This bibliography contains 725 references to articles in journals, books, and reports published in the subject area of biomedical and environmental sciences during 1982. There are 553 references to articles published in journals and books and 172 references to reports. The citations appear once ordered by the first author's division or by the performing division. Staff members in the Biomedical and Environmental Sciences divisions have other publications not included in this bibliography; for example, theses, book reviews, abstracts published in journals or symposia proceedings, pending journal publications and reports such as monthly, bimonthly, and quarterly progress reports, contractor reports, and reports for internal distribution. This document is sorted by the division, and then alphabetically by author. The sorting by divisions separates the references by subject area in a simple way. The divisions are represented alphabetically. Indexes are provided by author, title, and journal reference. Reprints of articles referenced in this bibliography can be obtained from the author or the author's division

  9. Vibrational spectroscopy in biomedical science: bone

    Science.gov (United States)

    Gamsjäger, Sonja; Zoehrer, R.; Roschger, P.; Fratzl, P.; Klaushofer, K.; Mendelsohn, R.; Paschalis, E. P.

    2009-02-01

    Fourier transform infrared imaging (FTIR) and Raman Microspectroscopy are powerful tools for characterizing the distribution of different chemical moieties in heterogeneous materials. FTIR and Raman measurements have been adapted to assess the maturity of the mineral and the quality of the organic component (collagen and non-collagenous proteins) of the mineralized tissue in bone. Unique to the FTIRI analysis is the capability to provide the spatial distribution of two of the major collagen cross-links (pyridinoline, and dehydro-dihydroxylysinonorleucine) and through the study of normal and diseased bone, relate them to bone strength. These FTIR parameters have been validated based on analysis of model compounds. It is widely accepted that bone strength is determined by bone mass and bone quality. The latter is a multifactorial term encompassing the material and structural properties of bone, and one important aspect of the bone material properties is the organic matrix. The bone material properties can be defined by parameters of mineral and collagen, as determined by FTIR and Raman analysis. Considerably less attention has been directed at collagen, although there are several publications in the literature reporting altered collagen properties associated with fragile bone, in both animals and humans. Since bone is a heterogeneous tissue due to the remodeling process, microscopic areas may be carefully selected based on quantitative Backscattered Electron Imaging or histological staining, thus ensuring comparison of areas with similar metabolic activity and mineral content. In conclusion, FTIRI and Raman vibrational spectroscopy are proving to be powerful tools in bone-related medical research.

  10. Life and Biomedical Sciences and Applications Advisory Subcommittee Meeting

    Science.gov (United States)

    1996-01-01

    The proceedings of the August 1995 meeting of the Life and Biomedical Sciences and Applications Advisory Subcommittee (LBSAAS) are summarized. The following topics were addressed by the Subcommittee members: the activities and status of the LBSA Division; program activities of the Office of Life and Microgravity Sciences and Applications (OLMSA); the medical Countermeasures Program; and the Fettman Report on animal research activities at ARC. Also presented were a history and overview of the activities of the Space Station Utilization Advisory Committee and the Advanced Life Support Program (ALSP). The meeting agenda and a list of the Subcommittee members and meeting attendees are included as appendices.

  11. 76 FR 24974 - Joint Biomedical Laboratory Research and Development and Clinical Science Research and...

    Science.gov (United States)

    2011-05-03

    ... AFFAIRS Joint Biomedical Laboratory Research and Development and Clinical Science Research and Development... following four panels of the Joint Biomedical Laboratory Research and Development and Clinical Science... involve a wide range of medical specialties within the general areas of biomedical, behavioral...

  12. 78 FR 28292 - Joint Biomedical Laboratory Research and Development and Clinical Science Research and...

    Science.gov (United States)

    2013-05-14

    ... AFFAIRS Joint Biomedical Laboratory Research and Development and Clinical Science Research and Development... areas of biomedical, behavioral and clinical science research. The panel meetings will be open to the... location changes have been made for the following panel meetings of the of the Joint Biomedical...

  13. Integration Platform for Biomedical Image Analysis

    OpenAIRE

    Rantanen, Ville

    2015-01-01

    Images provide invaluable information to Biomedicine. Especially, microscopy as an information source has been providing knowledge for research and clinical diagnostics. We have moved away from simply looking at the images to quantifiable computerized image analysis. Over the last decades, image analysis developers have prepared algorithms and software to address various scientific enquiries using images. These software are often created for a single purpose. Naturally, not even the most gene...

  14. Publications in biomedical and environmental sciences programs, 1981

    International Nuclear Information System (INIS)

    This bibliography contains 698 references to articles in journals, books, and reports published in the subject area of biomedical and environmental sciences during 1981. There are 520 references to articles published in journals and books and 178 references to reports. Staff members in the Biomedical and Environmental Sciences divisions have other publications not included in this bibliography; for example, theses, book reviews, abstracts published in journals or symposia proceedings, pending journal publications and reports such as monthly, bimonthly, and quarterly progress reports, contractor reports, and reports for internal distribution. This document is sorted by the division, and then alphabetically by author. The sorting by divisions separates the references by subject area in a simple way. The divisions represented in the order that they appear in the bibliography are Analytical Chemistry, Biology, Chemical Technology, Information R and D, Health and Safety Research, Instrumentation and Controls, Computer Sciences, Energy, Engineering Technology, Solid State, Central Management, Operations, and Environmental Sciences. Indexes are provided by author, title, and journal reference

  15. Publications in biomedical and environmental sciences programs, 1981

    Energy Technology Data Exchange (ETDEWEB)

    Moody, J.B. (comp.)

    1982-07-01

    This bibliography contains 698 references to articles in journals, books, and reports published in the subject area of biomedical and environmental sciences during 1981. There are 520 references to articles published in journals and books and 178 references to reports. Staff members in the Biomedical and Environmental Sciences divisions have other publications not included in this bibliography; for example, theses, book reviews, abstracts published in journals or symposia proceedings, pending journal publications and reports such as monthly, bimonthly, and quarterly progress reports, contractor reports, and reports for internal distribution. This document is sorted by the division, and then alphabetically by author. The sorting by divisions separates the references by subject area in a simple way. The divisions represented in the order that they appear in the bibliography are Analytical Chemistry, Biology, Chemical Technology, Information R and D, Health and Safety Research, Instrumentation and Controls, Computer Sciences, Energy, Engineering Technology, Solid State, Central Management, Operations, and Environmental Sciences. Indexes are provided by author, title, and journal reference.

  16. Continuous-terahertz-wave molecular imaging system for biomedical applications

    Science.gov (United States)

    Zhang, Rui; Zhang, Liangliang; Wu, Tong; Wang, Ruixue; Zuo, Shasha; Wu, Dong; Zhang, Cunlin; Zhang, Jue; Fang, Jing

    2016-07-01

    Molecular imaging techniques are becoming increasingly important in biomedical research and potentially in clinical practice. We present a continuous-terahertz (THz)-wave molecular imaging system for biomedical applications, in which an infrared (IR) laser is integrated into a 0.2-THz reflection-mode continuous-THz-wave imaging system to induce surface plasmon polaritons on the nanoparticles and further improve the intensity of the reflected signal from the water around the nanoparticles. A strong and rapid increment of the reflected THz signal in the nanoparticle solution upon the IR laser irradiation is demonstrated, using either gold or silver nanoparticles. This low-cost, simple, and stable continuous-THz-wave molecular imaging system is suitable for miniaturization and practical imaging applications; in particular, it shows great promise for cancer diagnosis and nanoparticle drug-delivery monitoring.

  17. Photoacoustic lifetime imaging and its biomedical applications

    Science.gov (United States)

    Shao, Qi

    Even though oxygen plays a crucial role in body function and cancer biology, methods of measuring oxygen level in tissue are all limited. The current gold standard relies on an invasive electrode for only single-point reading at a time. The photoacoustic lifetime imaging (PALI) approach overcomes these major limitations by applying photoacoustic probing to oxygen-sensitive optical transient absorption. The capability of assessing oxygen distribution is demonstrated by imaging tumor hypoxia in a small animal model, and monitoring changes of tissue oxygen induced by external modulations. Proposed applications of this imaging technique includes imaging-guided photodynamic therapy (PDT) and activatable probes for molecular imaging.

  18. Ultrasmall lanthanide oxide nanoparticles for biomedical imaging and therapy

    CERN Document Server

    Lee, Gang Ho

    2014-01-01

    Most books discuss general and broad topics regarding molecular imagings. However, Ultrasmall Lanthanide Oxide Nanoparticles for Biomedical Imaging and Therapy, will mainly focus on lanthanide oxide nanoparticles for molecular imaging and therapeutics. Multi-modal imaging capabilities will discussed, along with up-converting FI by using lanthanide oxide nanoparticles. The synthesis will cover polyol synthesis of lanthanide oxide nanoparticles, Surface coatings with biocompatible and hydrophilic ligands will be discussed and TEM images and dynamic light scattering (DLS) patterns will be

  19. Bessel filters applied in biomedical image processing

    Science.gov (United States)

    Mesa Lopez, Juan Pablo; Castañeda Saldarriaga, Diego Leon

    2014-06-01

    A magnetic resonance is an image obtained by means of an imaging test that uses magnets and radio waves to create body images, however, in some images it's difficult to recognize organs or foreign agents present in the body. With these Bessel filters the objective is to significantly increase the resolution of magnetic resonance images taken to make them much clearer in order to detect anomalies and diagnose the illness. As it's known, Bessel filters appear to solve the Schrödinger equation for a particle enclosed in a cylinder and affect the image distorting the colors and contours of it, therein lies the effectiveness of these filters, since the clear outline shows more defined and easy to recognize abnormalities inside the body.

  20. Biomedical Imaging and Computational Modeling in Biomechanics

    CERN Document Server

    Iacoviello, Daniela

    2013-01-01

    This book collects the state-of-art and new trends in image analysis and biomechanics. It covers a wide field of scientific and cultural topics, ranging from remodeling of bone tissue under the mechanical stimulus up to optimizing the performance of sports equipment, through the patient-specific modeling in orthopedics, microtomography and its application in oral and implant research, computational modeling in the field of hip prostheses, image based model development and analysis of the human knee joint, kinematics of the hip joint, micro-scale analysis of compositional and mechanical properties of dentin, automated techniques for cervical cell image analysis, and iomedical imaging and computational modeling in cardiovascular disease.   The book will be of interest to researchers, Ph.D students, and graduate students with multidisciplinary interests related to image analysis and understanding, medical imaging, biomechanics, simulation and modeling, experimental analysis.

  1. Life sciences biomedical research planning for Space Station

    Science.gov (United States)

    Primeaux, Gary R.; Michaud, Roger; Miller, Ladonna; Searcy, Jim; Dickey, Bernistine

    1987-01-01

    The Biomedical Research Project (BmRP), a major component of the NASA Life Sciences Space Station Program, incorporates a laboratory for the study of the effects of microgravity on the human body, and the development of techniques capable of modifying or counteracting these effects. Attention is presently given to a representative scenario of BmRP investigations and associated engineering analyses, together with an account of the evolutionary process by which the scenarios and the Space Station design requirements they entail are identified. Attention is given to a tether-implemented 'variable gravity centrifuge'.

  2. The Hidden Beauty in Biomedical Imaging.

    Science.gov (United States)

    Barker, Norman; Iacobuzio-Donahue, Christine

    2015-01-01

    Caretakers, researchers and photographers working in a busy academic settings, every day are faced with images that are awe-inspiring for their beauty and for the terror they may represent to patients suffering from disease. Beauty in this context is a relative term. It may be seen as the delicate lacework of cells within the normal human brain reminiscent of a Jackson Pollack masterpiece, or the multitude of colors and textures formed by fungal organisms in a microbiology lab. Herein lies the juxtaposition image makers seek to represent. When contemplated in isolation, each represents a visually interesting image. However, when viewed with an awareness of the context in which the image was obtained, each image takes on the ability to evoke an alternative human emotion.

  3. 77 FR 37684 - National Institute of Biomedical Imaging and Bioengineering; Notice of Closed Meeting

    Science.gov (United States)

    2012-06-22

    ... From the Federal Register Online via the Government Publishing Office DEPARTMENT OF HEALTH AND HUMAN SERVICES National Institutes of Health National Institute of Biomedical Imaging and Bioengineering... personal privacy. Name of Committee: National Institute of Biomedical Imaging and Bioengineering...

  4. 78 FR 42970 - National Institute of Biomedical Imaging and Bioengineering; Notice of Closed Meeting

    Science.gov (United States)

    2013-07-18

    ... From the Federal Register Online via the Government Publishing Office DEPARTMENT OF HEALTH AND HUMAN SERVICES National Institutes of Health National Institute of Biomedical Imaging and Bioengineering... personal privacy. Name of Committee: National Institute of Biomedical Imaging and Bioengineering...

  5. 78 FR 6126 - National Institute of Biomedical Imaging and Bioengineering; Notice of Closed Meeting.

    Science.gov (United States)

    2013-01-29

    ... From the Federal Register Online via the Government Publishing Office DEPARTMENT OF HEALTH AND HUMAN SERVICES National Institutes of Health National Institute of Biomedical Imaging and Bioengineering... personal privacy. Name of Committee: National Institute of Biomedical Imaging and Bioengineering...

  6. 75 FR 57969 - National Institute of Biomedical Imaging and Bioengineering; Notice of Closed Meeting

    Science.gov (United States)

    2010-09-23

    ... From the Federal Register Online via the Government Publishing Office DEPARTMENT OF HEALTH AND HUMAN SERVICES National Institutes of Health National Institute of Biomedical Imaging and Bioengineering... personal privacy. Name of Committee: National Institute of Biomedical Imaging and Bioengineering...

  7. 75 FR 6039 - National Institute of Biomedical Imaging and Bioengineering; Notice of Closed Meeting

    Science.gov (United States)

    2010-02-05

    ... From the Federal Register Online via the Government Publishing Office DEPARTMENT OF HEALTH AND HUMAN SERVICES National Institutes of Health National Institute of Biomedical Imaging and Bioengineering... personal privacy. Name of Committee: National Institute of Biomedical Imaging and Bioengineering...

  8. 76 FR 77546 - National Institute of Biomedical Imaging and Bioengineering; Notice of Closed Meeting

    Science.gov (United States)

    2011-12-13

    ... From the Federal Register Online via the Government Publishing Office DEPARTMENT OF HEALTH AND HUMAN SERVICES National Institutes of Health National Institute of Biomedical Imaging and Bioengineering... personal privacy. Name of Committee: National Institute of Biomedical Imaging and Bioengineering...

  9. 76 FR 5593 - National Institute of Biomedical Imaging and Bioengineering; Notice of Closed Meeting

    Science.gov (United States)

    2011-02-01

    ... From the Federal Register Online via the Government Publishing Office DEPARTMENT OF HEALTH AND HUMAN SERVICES National Institutes of Health National Institute of Biomedical Imaging and Bioengineering... personal privacy. Name of Committee: National Institute of Biomedical Imaging and Bioengineering...

  10. 77 FR 2737 - National Institute of Biomedical Imaging and Bioengineering; Notice of Closed Meeting

    Science.gov (United States)

    2012-01-19

    ... From the Federal Register Online via the Government Publishing Office DEPARTMENT OF HEALTH AND HUMAN SERVICES National Institutes of Health National Institute of Biomedical Imaging and Bioengineering... personal privacy. Name of Committee: National Institute of Biomedical Imaging and Bioengineering...

  11. 77 FR 3480 - National Institute of Biomedical Imaging and Bioengineering; Notice of Closed Meeting

    Science.gov (United States)

    2012-01-24

    ... From the Federal Register Online via the Government Publishing Office DEPARTMENT OF HEALTH AND HUMAN SERVICES National Institutes of Health National Institute of Biomedical Imaging and Bioengineering... personal privacy. Name of Committee: National Institute of Biomedical Imaging and Bioengineering...

  12. 78 FR 63998 - National Institute of Biomedical Imaging and Bioengineering; Notice of Closed Meeting

    Science.gov (United States)

    2013-10-25

    ... From the Federal Register Online via the Government Publishing Office DEPARTMENT OF HEALTH AND HUMAN SERVICES National Institutes of Health National Institute of Biomedical Imaging and Bioengineering... personal privacy. Name of Committee: National Institute of Biomedical Imaging and Bioengineering...

  13. 77 FR 38845 - National Institute of Biomedical Imaging and Bioengineering; Notice of Closed Meeting

    Science.gov (United States)

    2012-06-29

    ... From the Federal Register Online via the Government Publishing Office DEPARTMENT OF HEALTH AND HUMAN SERVICES National Institutes of Health National Institute of Biomedical Imaging and Bioengineering... personal privacy. Name of Committee: National Institute of Biomedical Imaging and Bioengineering...

  14. 76 FR 62814 - National Institute of Biomedical Imaging and Bioengineering; Notice of Closed Meeting

    Science.gov (United States)

    2011-10-11

    ... From the Federal Register Online via the Government Publishing Office DEPARTMENT OF HEALTH AND HUMAN SERVICES National Institutes of Health National Institute of Biomedical Imaging and Bioengineering... personal privacy. Name of Committee: National Institute of Biomedical Imaging and Bioengineering...

  15. 75 FR 54641 - National Institute of Biomedical Imaging and Bioengineering; Notice of Closed Meeting

    Science.gov (United States)

    2010-09-08

    ... From the Federal Register Online via the Government Publishing Office DEPARTMENT OF HEALTH AND HUMAN SERVICES National Institutes of Health National Institute of Biomedical Imaging and Bioengineering... personal privacy. Name of Committee: National Institute of Biomedical Imaging and Bioengineering...

  16. 77 FR 31624 - National Institute of Biomedical Imaging and Bioengineering; Notice of Closed Meeting

    Science.gov (United States)

    2012-05-29

    ... From the Federal Register Online via the Government Publishing Office DEPARTMENT OF HEALTH AND HUMAN SERVICES National Institutes of Health National Institute of Biomedical Imaging and Bioengineering... personal privacy. Name of Committee: National Institute of Biomedical Imaging and Bioengineering...

  17. 78 FR 55268 - National Institute of Biomedical Imaging and Bioengineering; Notice of Closed Meeting

    Science.gov (United States)

    2013-09-10

    ... From the Federal Register Online via the Government Publishing Office DEPARTMENT OF HEALTH AND HUMAN SERVICES National Institutes of Health National Institute of Biomedical Imaging and Bioengineering... personal privacy. Name of Committee: National Institute of Biomedical Imaging and Bioengineering...

  18. 78 FR 58547 - National Institute of Biomedical Imaging and Bioengineering; Notice of Closed Meeting

    Science.gov (United States)

    2013-09-24

    ... From the Federal Register Online via the Government Publishing Office DEPARTMENT OF HEALTH AND HUMAN SERVICES National Institutes of Health National Institute of Biomedical Imaging and Bioengineering... personal privacy. Name of Committee: National Institute of Biomedical Imaging and Bioengineering...

  19. 76 FR 28795 - National Institute of Biomedical Imaging and Bioengineering; Notice of Closed Meeting

    Science.gov (United States)

    2011-05-18

    ... From the Federal Register Online via the Government Publishing Office DEPARTMENT OF HEALTH AND HUMAN SERVICES National Institutes of Health National Institute of Biomedical Imaging and Bioengineering... personal privacy. Name of Committee: National Institute of Biomedical Imaging and Bioengineering...

  20. 78 FR 71627 - National Institute of Biomedical Imaging and Bioengineering; Notice of Closed Meeting

    Science.gov (United States)

    2013-11-29

    ... From the Federal Register Online via the Government Publishing Office DEPARTMENT OF HEALTH AND HUMAN SERVICES National Institutes of Health National Institute of Biomedical Imaging and Bioengineering... personal privacy. Name of Committee: National Institute of Biomedical Imaging and Bioengineering...

  1. 76 FR 28055 - National Institute of Biomedical Imaging and Bioengineering; Notice of Closed Meeting

    Science.gov (United States)

    2011-05-13

    ... From the Federal Register Online via the Government Publishing Office DEPARTMENT OF HEALTH AND HUMAN SERVICES National Institutes of Health National Institute of Biomedical Imaging and Bioengineering... personal privacy. Name of Committee: National Institute of Biomedical Imaging and Bioengineering...

  2. 76 FR 10910 - National Institute of Biomedical Imaging and Bioengineering; Notice of Closed Meeting

    Science.gov (United States)

    2011-02-28

    ... From the Federal Register Online via the Government Publishing Office ] DEPARTMENT OF HEALTH AND HUMAN SERVICES National Institutes of Health National Institute of Biomedical Imaging and Bioengineering... personal privacy. Name of Committee: National Institute of Biomedical Imaging and Bioengineering...

  3. Sodium Magnetic Resonance Imaging: Biomedical Applications

    CERN Document Server

    Madelin, Guillaume

    2012-01-01

    In this article, we present an up-to-date overview of the potential biomedical applications of sodium MRI in vivo. Sodium MRI is a subject of increasing interest in translational research as it can give some direct and quantitative biochemical information on the tissue viability, cell integrity and function, and therefore not only help the diagnosis but also the prognosis of diseases and treatment outcomes. It has already been applied in vivo in most of human tissues, such as brain for stroke or tumor detection and therapeutic response, in breast cancer, in articular cartilage, in muscle and in kidney, and it was shown in some studies that it could provide very useful new information not available through standard proton MRI. However, this technique is still very challenging due to the low detectable sodium signal in biological tissue with MRI and hardware/software limitations of the clinical scanners. The article is divided in three parts: (1) the role of sodium in biological tissues, (2) a short review on s...

  4. Graduate Experience in Science Education: The Development of a Science Education Course for Biomedical Science Graduate Students

    Science.gov (United States)

    Markowitz, Dina G.; DuPre, Michael J.

    2007-01-01

    The University of Rochester's Graduate Experience in Science Education (GESE) course familiarizes biomedical science graduate students interested in pursuing academic career tracks with a fundamental understanding of some of the theory, principles, and concepts of science education. This one-semester elective course provides graduate students with…

  5. Comparison of three types of XPAD3.2/CdTe single chip hybrids for hard X-ray applications in material science and biomedical imaging

    Energy Technology Data Exchange (ETDEWEB)

    Buton, C., E-mail: clement.buton@synchrotron-soleil.fr [Synchrotron SOLEIL, L´Orme des Merisiers, Saint-Aubin — BP 48 91192, Gif-sur-Yvette Cedex (France); Dawiec, A. [Synchrotron SOLEIL, L´Orme des Merisiers, Saint-Aubin — BP 48 91192, Gif-sur-Yvette Cedex (France); Graber-Bolis, J.; Arnaud, K. [CPPM, Aix-Marseille Université, CNRS/IN2P3, Marseille (France); Bérar, J.F.; Blanc, N.; Boudet, N. [Université Grenoble Alpes, Institut NÉEL, F-38042 Grenoble (France); CNRS, Institut NÉEL, F-38042 Grenoble (France); Clémens, J.C.; Debarbieux, F. [CPPM, Aix-Marseille Université, CNRS/IN2P3, Marseille (France); Delpierre, P.; Dinkespiler, B. [imXPAD SAS — Espace Mistral, Athélia IV, 297 avenue du Mistral, 13600 La Ciotat (France); Gastaldi, T. [CPPM, Aix-Marseille Université, CNRS/IN2P3, Marseille (France); Hustache, S. [Synchrotron SOLEIL, L´Orme des Merisiers, Saint-Aubin — BP 48 91192, Gif-sur-Yvette Cedex (France); Morel, C.; Pangaud, P. [CPPM, Aix-Marseille Université, CNRS/IN2P3, Marseille (France); Perez-Ponce, H. [imXPAD SAS — Espace Mistral, Athélia IV, 297 avenue du Mistral, 13600 La Ciotat (France); Vigeolas, E. [CPPM, Aix-Marseille Université, CNRS/IN2P3, Marseille (France)

    2014-09-11

    The CHIPSPECT consortium aims at building a large multi-modules CdTe based photon counting detector for hard X-ray applications. For this purpose, we tested nine XPAD3.2 single chip hybrids in various configurations (i.e. Ohmic vs. Schottky contacts or electrons vs. holes collection mode) in order to select the most performing and best suited configuration for our experimental requirements. Measurements have been done using both X-ray synchrotron beams and {sup 241}Am source. Preliminary results on the image quality, calibration, stability, homogeneity and linearity of the different types of detectors are presented.

  6. Publications in biomedical and environmental sciences programs, 1982

    Energy Technology Data Exchange (ETDEWEB)

    Moody, J.B. (comp.)

    1983-04-01

    This bibliography contains 725 references to articles in journals, books, and reports published in the subject area of biomedical and environmental sciences during 1982. There are 553 references to articles published in journals and books and 172 references to reports. The citations appear once ordered by the first author's division or by the performing division. Staff members in the Biomedical and Environmental Sciences divisions have other publications not included in this bibliography; for example, theses, book reviews, abstracts published in journals or symposia proceedings, pending journal publications and reports such as monthly, bimonthly, and quarterly progress reports, contractor reports, and reports for internal distribution. This document is sorted by the division, and then alphabetically by author. The sorting by divisions separates the references by subject area in a simple way. The divisions are represented alphabetically. Indexes are provided by author, title, and journal reference. Reprints of articles referenced in this bibliography can be obtained from the author or the author's division.

  7. 78 FR 107 - National Institute of Biomedical Imaging and Bioengineering; Notice of Closed Meeting

    Science.gov (United States)

    2013-01-02

    ... HUMAN SERVICES National Institutes of Health National Institute of Biomedical Imaging and Bioengineering... personal privacy. Name of Committee: National Institute of Biomedical Imaging and Bioengineering Special... Person: John K. Hayes, Ph.D., Scientific Review Officer, National Institute of Biomedical Imaging...

  8. 76 FR 15988 - National Institute of Biomedical Imaging and Bioengineering; Notice of Meeting

    Science.gov (United States)

    2011-03-22

    ... HUMAN SERVICES National Institutes of Health National Institute of Biomedical Imaging and Bioengineering.... App.), notice is hereby given of a meeting of the National Advisory Council for Biomedical Imaging and... personal privacy. Name of Committee: National Advisory Council for Biomedical Imaging and...

  9. 78 FR 76634 - National Institute of Biomedical Imaging and Bioengineering; Notice of Meeting

    Science.gov (United States)

    2013-12-18

    ... HUMAN SERVICES National Institutes of Health National Institute of Biomedical Imaging and Bioengineering.... App.), notice is hereby given of a meeting of the National Advisory Council for Biomedical Imaging and... of Committee: National Advisory Council for Biomedical Imaging and Bioengineering. Date: January...

  10. Coherent fiber supercontinuum laser for nonlinear biomedical imaging

    DEFF Research Database (Denmark)

    Tu, Haohua; Liu, Yuan; Liu, Xiaomin;

    2012-01-01

    Nonlinear biomedical imaging has not benefited from the well-known techniques of fiber supercontinuum generation for reasons such as poor coherence (or high noise), insufficient controllability, low spectral power intensity, and inadequate portability. Fortunately, a few techniques involving...... nonlinear fiber optics and femtosecond fiber laser development have emerged to overcome these critical limitations. These techniques pave the way for conducting point-of-care nonlinear biomedical imaging by a low-maintenance cost-effective coherent fiber supercontinuum laser, which covers a broad emission...... wavelength of 350-1700 nm. A prototype of this laser has been demonstrated in label-free multimodal nonlinear imaging of cell and tissue samples.© (2012) COPYRIGHT Society of Photo-Optical Instrumentation Engineers (SPIE). Downloading of the abstract is permitted for personal use only....

  11. Computational optical biomedical spectroscopy and imaging

    CERN Document Server

    Musa, Sarhan M

    2015-01-01

    Applications of Vibrational Spectroscopic Imaging in Personal Care Studies; Guojin Zhang, Roger L. McMullen, Richard Mendelsohn, and Osama M. MusaFluorescence Bioimaging with Applications to Chemistry; Ufana Riaz and S.M. AshrafNew Trends in Immunohistochemical, Genome, and Metabolomics Imaging; G. Livanos, Aditi Deshpande, C. Narayan, Ying Na, T. Quang, T. Farrahi, R. Koglin, Suman Shrestha, M. Zervakis, and George C. GiakosDeveloping a Comprehensive Taxonomy for Human Cell Types; Richard Conroy and Vinay PaiFunctional Near-Infrared S

  12. Analyser-based x-ray imaging for biomedical research

    International Nuclear Information System (INIS)

    Analyser-based imaging (ABI) is one of the several phase-contrast x-ray imaging techniques being pursued at synchrotron radiation facilities. With advancements in compact source technology, there is a possibility that ABI will become a clinical imaging modality. This paper presents the history of ABI as it has developed from its laboratory source to synchrotron imaging. The fundamental physics of phase-contrast imaging is presented both in a general sense and specifically for ABI. The technology is dependent on the use of perfect crystal monochromator optics. The theory of the x-ray optics is developed and presented in a way that will allow optimization of the imaging for specific biomedical systems. The advancement of analytical algorithms to produce separate images of the sample absorption, refraction angle map and small-angle x-ray scattering is detailed. Several detailed applications to biomedical imaging are presented to illustrate the broad range of systems and body sites studied preclinically to date: breast, cartilage and bone, soft tissue and organs. Ultimately, the application of ABI in clinical imaging will depend partly on the availability of compact sources with sufficient x-ray intensity comparable with that of the current synchrotron environment. (paper)

  13. Nonlinear Polarimetric Microscopy for Biomedical Imaging

    Science.gov (United States)

    Samim, Masood

    A framework for the nonlinear optical polarimetry and polarimetric microscopy is developed. Mathematical equations are derived in terms of linear and nonlinear Stokes Mueller formalism, which comprehensively characterize the polarization properties of the incoming and outgoing radiations, and provide structural information about the organization of the investigated materials. The algebraic formalism developed in this thesis simplifies many predictions for a nonlinear polarimetry study and provides an intuitive understanding of various polarization properties for radiations and the intervening medium. For polarimetric microscopy experiments, a custom fast-scanning differential polarization microscope is developed, which is also capable of real-time three-dimensional imaging. The setup is equipped with a pair of high-speed resonant and galvanometric scanning mirrors, and supplemented by advanced adaptive optics and data acquisition modules. The scanning mirrors when combined with the adaptive optics deformable mirror enable fast 3D imaging. Deformable membrane mirrors and genetic algorithm optimization routines are employed to improve the imaging conditions including correcting the optical aberrations, maximizing signal intensities, and minimizing point-spread-functions of the focal volume. A field-programmable-gate array (FPGA) chip is exploited to rapidly acquire and process the multidimensional data. Using the nonlinear optical polarimetry framework and the home-built polarization microscope, a few biologically important tissues are measured and analyzed to gain insight as to their structure and dynamics. The structure and distribution of muscle sarcomere myosins, connective tissue collagen, carbohydrate-rich starch, and fruit fly eye retinal molecules are characterized with revealing polarization studies. In each case, using the theoretical framework, polarization sensitive data are analyzed to decipher the molecular orientations and nonlinear optical

  14. High sensitivity and high selectivity terahertz biomedical imaging

    Institute of Scientific and Technical Information of China (English)

    Seongsin M. Kim; William Baughman; David S. Wilbert; Lee Butler; Michael Bolus; Soner Balci; Patrick Kung

    2011-01-01

    We demonstrate two distinct emerging terahertz (THz) biomedical imaging techniques. One is based on the use of a new single frequency THz quantum cascade laser and the other is based on broadband THz time domain spectrocopy. The first method is employed to derive a metastasis lung tissue imaging at 3.7 THz with clear contrast between cancerous and healthy areas. The second approach is used to study an osseous tissue under several imaging modalities and achieve full THz spectroscopic imaging based on the frequency domain or on a fixed THz propagation time-delay. Sufficient contrast is achieved which facilitated the identification of regions with different cellular types and density compositions.%Terahertz (THz) imaging is a non-destructive,nonionizing imaging technology with potential applications in medicine,dentistry,pharmaceuticals,and homeland security[1-5].In these applications,THz biomedical imaging has become a particularly important and active field of research because of the potential for safer early screening of a disease.This will benefit the medical community tremendously and create considerable sociological impact.

  15. Context-Aware Adaptive Hybrid Semantic Relatedness in Biomedical Science

    Science.gov (United States)

    Emadzadeh, Ehsan

    Text mining of biomedical literature and clinical notes is a very active field of research in biomedical science. Semantic analysis is one of the core modules for different Natural Language Processing (NLP) solutions. Methods for calculating semantic relatedness of two concepts can be very useful in solutions solving different problems such as relationship extraction, ontology creation and question / answering [1--6]. Several techniques exist in calculating semantic relatedness of two concepts. These techniques utilize different knowledge sources and corpora. So far, researchers attempted to find the best hybrid method for each domain by combining semantic relatedness techniques and data sources manually. In this work, attempts were made to eliminate the needs for manually combining semantic relatedness methods targeting any new contexts or resources through proposing an automated method, which attempted to find the best combination of semantic relatedness techniques and resources to achieve the best semantic relatedness score in every context. This may help the research community find the best hybrid method for each context considering the available algorithms and resources.

  16. 76 FR 66367 - Joint Biomedical Laboratory Research and Development and Clinical Science Research and...

    Science.gov (United States)

    2011-10-26

    ... AFFAIRS Joint Biomedical Laboratory Research and Development and Clinical Science Research and Development... medical specialties within the general areas of biomedical, behavioral and clinical science research. The... under the Public Law 92-463 (Federal Advisory Committee Act) that the panels of the Joint...

  17. 77 FR 26069 - Joint Biomedical Laboratory Research and Development and Clinical Science Research and...

    Science.gov (United States)

    2012-05-02

    ... AFFAIRS Joint Biomedical Laboratory Research and Development and Clinical Science Research and Development... following three panels of the Joint Biomedical Laboratory Research and Development and Clinical Science... review by the Board involve a wide range of medical specialties within the general areas of...

  18. 75 FR 57833 - Joint Biomedical Laboratory Research and Development and Clinical Science Research and...

    Science.gov (United States)

    2010-09-22

    ... AFFAIRS Joint Biomedical Laboratory Research and Development and Clinical Science Research and Development... under the Public Law 92-463 (Federal Advisory Committee Act) that the panels of the Joint Biomedical Laboratory Research and Development and Clinical Science Research and Development Services Scientific...

  19. 75 FR 23847 - Joint Biomedical Laboratory Research and Development and Clinical Science Research and...

    Science.gov (United States)

    2010-05-04

    ... AFFAIRS Joint Biomedical Laboratory Research and Development and Clinical Science Research and Development... range of medical specialties within the general areas of biomedical, behavioral and clinical science... under Public Law 92-463 (Federal Advisory Committee Act), that the panels of the Joint...

  20. 78 FR 77474 - National Institute of Biomedical Imaging and Bioengineering; Notice of Closed Meeting

    Science.gov (United States)

    2013-12-23

    ... HUMAN SERVICES National Institutes of Health National Institute of Biomedical Imaging and Bioengineering... personal privacy. Name of Committee: National Institute of Biomedical Imaging and Bioengineering Special...). Contact Person: John K. Hayes, Ph.D., Scientific Review Officer, National Institute of Biomedical...

  1. 77 FR 49821 - National Institute of Biomedical Imaging and Bioengineering; Notice of Closed Meeting

    Science.gov (United States)

    2012-08-17

    ... HUMAN SERVICES National Institutes of Health National Institute of Biomedical Imaging and Bioengineering... personal privacy. Name of Committee: National Institute of Biomedical Imaging and Bioengineering Special.... Contact Person: John K. Hayes, Ph.D., Scientific Review Officer, National Institute of Biomedical...

  2. 78 FR 24223 - National Institute of Biomedical Imaging and Bioengineering; Notice of Closed Meeting

    Science.gov (United States)

    2013-04-24

    ... HUMAN SERVICES National Institutes of Health National Institute of Biomedical Imaging and Bioengineering... personal privacy. Name of Committee: National Institute of Biomedical Imaging and Bioengineering Special...). Contact Person: John K. Hayes, Ph.D., Scientific Review Officer, National Institute of Biomedical...

  3. Different images of science

    DEFF Research Database (Denmark)

    Davidsson, Eva

    ' ideas about visitors' learning, this seems to influence their choices of scientific aspects. The results imply that staff members tend to use only an experience-based approach to learning and do not consider what is known from the field of learning and informal settings and science education......  Within the science and technology centres (STC) movement there exists explicit aims and ambitions to enhance visitors' interest in and knowledge about science. Meanwhile, several researches question the choice of the scientific content in exhibitions when arguing that a too unproblematic view...... of science commonly is presented. But what images and aspects of science are visitors actually confronted with at STCs? How do staff members at STCs consider the scientific content and how do they choose what aspects of science to display in exhibitions? What ideas about visitors' learning do staff members...

  4. Overview of imaging science.

    OpenAIRE

    Beck, R. N.

    1993-01-01

    The traditional disciplines of science are grounded in the observation and measurement of object properties. Recent advances in digital computer technology have spawned numerous computer-based imaging systems that extend the range of observation and measurement into realms that would otherwise be inaccessible. More importantly, the same set of principles, concepts, strategies, and methods may be used to address the generic issues involved in the production and use of all digitized images. Rec...

  5. Teaching authorship and publication practices in the biomedical and life sciences.

    Science.gov (United States)

    Macrina, Francis L

    2011-06-01

    Examination of a limited number of publisher's Instructions for Authors, guidelines from two scientific societies, and the widely accepted policy document of the International Committee of Medical Journal Editors (ICMJE) provided useful information on authorship practices. Three of five journals examined (Nature, Science, and the Proceedings of the National Academy of Sciences) publish papers across a variety of disciplines. One is broadly focused on topics in medical research (New England Journal of Medicine) and one publishes research reports in a single discipline (Journal of Bacteriology). Similar elements of publication policy and accepted practices were found across the policies of these journals articulated in their Instructions for Authors. A number of these same elements were found in the professional society guidelines of the Society for Neuroscience and the American Chemical Society, as well as the ICMJE Uniform Requirements for Manuscripts Submitted to Biomedical Journals. Taken together, these sources provide the basis for articulating best practices in authorship in scientific research. Emerging from this material is a definition of authorship, as well as policy statements on duplicative publication, conflict of interest disclosure, electronic access, data sharing, digital image integrity, and research requiring subjects' protection, including prior registration of clinical trials. These common elements provide a foundation for teaching about scientific authorship and publication practices across biomedical and life sciences disciplines.

  6. Biomedical Biopolymers, their Origin and Evolution in Biomedical Sciences: A Systematic Review.

    Science.gov (United States)

    Yadav, Preeti; Yadav, Harsh; Shah, Veena Gowri; Shah, Gaurav; Dhaka, Gaurav

    2015-09-01

    Biopolymers provide a plethora of applications in the pharmaceutical and medical applications. A material that can be used for biomedical applications like wound healing, drug delivery and tissue engineering should possess certain properties like biocompatibility, biodegradation to non-toxic products, low antigenicity, high bio-activity, processability to complicated shapes with appropriate porosity, ability to support cell growth and proliferation and appropriate mechanical properties, as well as maintaining mechanical strength. This paper reviews biodegradable biopolymers focusing on their potential in biomedical applications. Biopolymers most commonly used and most abundantly available have been described with focus on the properties relevant to biomedical importance.

  7. Development of biosensor based on imaging ellipsometry and biomedical applications

    Energy Technology Data Exchange (ETDEWEB)

    Jin, G., E-mail: gajin@imech.ac.c [NML, Institute of Mechanics, Chinese Academy of Sciences, 15 Bei-si-huan west Rd., Beijing 100190 (China); Meng, Y.H.; Liu, L.; Niu, Y.; Chen, S. [NML, Institute of Mechanics, Chinese Academy of Sciences, 15 Bei-si-huan west Rd., Beijing 100190 (China); Cai, Q.; Jiang, T.J. [Institute of Biophysics, Chinese Academy of Sciences, Beijing 100101 (China)

    2011-02-28

    So far, combined with a microfluidic reactor array system, an engineering system of biosensor based on imaging ellipsometry is installed for biomedical applications, such as antibody screen, hepatitis B markers detection, cancer markers spectrum and virus recognition, etc. Furthermore, the biosensor in total internal reflection (TIR) mode has be improved by a spectroscopic light, optimization settings of polarization and low noise CCD which brings an obvious improvement of 10 time increase in the sensitivity and SNR, and 50 times lower concentration in the detection limit with a throughput of 48 independent channels and the time resolution of 0.04 S.

  8. The rolling evolution of biomedical science as an essential tool in modern clinical practice.

    Science.gov (United States)

    Blann, Andrew

    2016-01-01

    The British Journal of Biomedical Science is committed to publishing high-quality original research that represents a clear advance in the practice of biomedical science, and reviews that summarise recent advances in the field of biomedical science. The overall aim of the Journal is to provide a platform for the dissemination of new and innovative information on the diagnosis and management of disease that is valuable to the practicing laboratory scientist. The Editorial that follows describes the Journal and provides a perspective of its aims and objectives.

  9. The rolling evolution of biomedical science as an essential tool in modern clinical practice.

    Science.gov (United States)

    Blann, Andrew

    2016-01-01

    The British Journal of Biomedical Science is committed to publishing high-quality original research that represents a clear advance in the practice of biomedical science, and reviews that summarise recent advances in the field of biomedical science. The overall aim of the Journal is to provide a platform for the dissemination of new and innovative information on the diagnosis and management of disease that is valuable to the practicing laboratory scientist. The Editorial that follows describes the Journal and provides a perspective of its aims and objectives. PMID:27182669

  10. Contributions on biomedical imaging, with a side-look at molecular imaging

    International Nuclear Information System (INIS)

    This report is intended as a brief introduction to the emerging scientific field of biomedical imaging. The breadth of the subject is shown and future fields of research are indicated, which hopefully will serve as a guide to the identification of starting points for the research in 'Biomedical and/or Molecular Imaging' at the GSF-National Research Center for Environment and Health. The report starts with a brief sketch of the history. Then a - necessarily incomplete - list of research topics is presented. It is organized in two parts: the first one addresses medical imaging, and the second one is concerned with biological point aspects of the matter. (orig.)

  11. British Journal of Biomedical Science in 2015: what have we learned?

    Science.gov (United States)

    Blann, Andrew; Nation, Brian

    2016-01-01

    In 2015, the British Journal of Biomedical Science published 47 reports on topics relating to the various disciplines within biomedical science. Of these, the majority were in infection science (15 in microbiology and two in virology) and blood science (seven in biochemistry, four in haematology, three in immunology and one in transplantation), with a smaller number in cellular sciences (four reports) and with one review across disciplines. The present report will summarise key aspects of these publications that are of greatest relevance to laboratory scientists.

  12. From Bench to Bedside: A Communal Utility Value Intervention to Enhance Students' Biomedical Science Motivation

    Science.gov (United States)

    Brown, Elizabeth R.; Smith, Jessi L.; Thoman, Dustin B.; Allen, Jill M.; Muragishi, Gregg

    2015-01-01

    Motivating students to pursue science careers is a top priority among many science educators. We add to the growing literature by examining the impact of a utility value intervention to enhance student's perceptions that biomedical science affords important utility work values. Using an expectancy-value perspective, we identified and tested 2…

  13. International Conference on Bio-Medical Instrumentation and related Engineering and Physical Sciences (BIOMEP 2015)

    Science.gov (United States)

    2015-09-01

    The International Conference on Bio-Medical Instrumentation and related Engineering and Physical Sciences (BIOMEP 2015) took place in the Technological Educational Institute (TEI) of Athens, Greece on June 18-20, 2015 and was organized by the Department of Biomedical Engineering. The scope of the conference was to provide a forum on the latest developments in Biomedical Instrumentation and related principles of Physical and Engineering sciences. Scientists and engineers from academic, industrial and health disciplines were invited to participate in the Conference and to contribute both in the promotion and dissemination of the scientific knowledge.

  14. Multidimensional biomedical image representation using a linear hypertree

    Science.gov (United States)

    Ibaroudene, Djaffer; Acharya, Raj S.

    1990-07-01

    Biomedical structures such as the beating heart are inherently multi-dimensional in nature. In addition to the three spatial directions which represent the object location and orientation, higher order dimensions can be assigned to represent various object parameters such as time and tissue density. In this paper, we propose a hierarchical data structure which can be mapped into a computer architecture that will efficiently store, manipulate, and display time varying images of multi-dimensional biomedical structures. This n-D object representation scheme which is called a linear hypertree is a generalization of the linear quadtree and octree from their respective 2-D and 3-D spaces to n-D environment. It is a hierarchical data structure which represents multi-dimensional volumetric information in a 2'-way branching tree. The basic properties of a linear hypertree are briefly presented along with the procedure for encoding the node rectangular coordinates into a hierarchical locational code. Two decoding techniques that transform the node locational code into its rectangular coordinate format are introduced. Some adjacency concepts in a multi-dimensional environment are defined. A neighbor finding algorithm which identifies the locational code of the adjacent hypertree node in a given direction is also presented. This algorithm does not convert the locational code to its rectangular coordinate form; instead, it operates directly on the node locational code in order to determine the neighbor's identification. Finally, Procedures for computing the locational codes of larger and smaller size neighbors are also included.

  15. Biomedical Big Data Training Collaborative (BBDTC): An effort to bridge the talent gap in biomedical science and research

    Science.gov (United States)

    Purawat, Shweta; Cowart, Charles; Amaro, Rommie E.; Altintas, Ilkay

    2016-01-01

    The BBDTC (https://biobigdata.ucsd.edu) is a community-oriented platform to encourage high-quality knowledge dissemination with the aim of growing a well-informed biomedical big data community through collaborative efforts on training and education. The BBDTC collaborative is an e-learning platform that supports the biomedical community to access, develop and deploy open training materials. The BBDTC supports Big Data skill training for biomedical scientists at all levels, and from varied backgrounds. The natural hierarchy of courses allows them to be broken into and handled as modules. Modules can be reused in the context of multiple courses and reshuffled, producing a new and different, dynamic course called a playlist. Users may create playlists to suit their learning requirements and share it with individual users or the wider public. BBDTC leverages the maturity and design of the HUBzero content-management platform for delivering educational content. To facilitate the migration of existing content, the BBDTC supports importing and exporting course material from the edX platform. Migration tools will be extended in the future to support other platforms. Hands-on training software packages, i.e., toolboxes, are supported through Amazon EC2 and Virtualbox virtualization technologies, and they are available as: (i) downloadable lightweight Virtualbox Images providing a standardized software tool environment with software packages and test data on their personal machines, and (ii) remotely accessible Amazon EC2 Virtual Machines for accessing biomedical big data tools and scalable big data experiments. At the moment, the BBDTC site contains three open Biomedical big data training courses with lecture contents, videos and hands-on training utilizing VM toolboxes, covering diverse topics. The courses have enhanced the hands-on learning environment by providing structured content that users can use at their own pace. A four course biomedical big data series is planned

  16. 76 FR 5184 - National Institute of Biomedical Imaging and Bioengineering; Amended Notice of Meeting

    Science.gov (United States)

    2011-01-28

    ... published in the Federal Register on January 5, 2011, 76 FR 572. This Federal Register Notice has been... HUMAN SERVICES National Institutes of Health National Institute of Biomedical Imaging and Bioengineering... Biomedical Imaging and Bioengineering Special Emphasis Panel, March 14, 2011, 6 p.m. to March 16, 2011, 12...

  17. 77 FR 25488 - National Institute of Biomedical Imaging and Bioengineering; Amended Notice of Meeting

    Science.gov (United States)

    2012-04-30

    ... April 2, 2012, 77 FR 19675. The meeting location has been changed to The Bolger Center, 9600 Newbridge... HUMAN SERVICES National Institutes of Health National Institute of Biomedical Imaging and Bioengineering... for Biomedical Imaging and Bioengineering, May 21, 2012, 9:00 a.m. to 3:00 p.m., Bethesda...

  18. 78 FR 78982 - National Institute of Biomedical Imaging and Bioengineering; Amended Notice of Meeting

    Science.gov (United States)

    2013-12-27

    ... published in the Federal Register on August 29, 2013, 78 FR 64506. The meeting notice is amended to change... HUMAN SERVICES National Institutes of Health National Institute of Biomedical Imaging and Bioengineering... Biomedical Imaging and Bioengineering Special Emphasis Panel, December 11, 2013, 08:30 a.m.,...

  19. 78 FR 64506 - National Institute of Biomedical Imaging and Bioengineering; Amended Notice of Meeting

    Science.gov (United States)

    2013-10-29

    ..., which was published in the Federal Register on July 26, 2013, 78 FR 45254. The meeting notice is amended... HUMAN SERVICES National Institutes of Health National Institute of Biomedical Imaging and Bioengineering... Biomedical Imaging and Bioengineering Special Emphasis Panel, October 11, 2013, 10:00 a.m. to 5:00...

  20. 78 FR 64966 - National Institute of Biomedical Imaging and Bioengineering; Amended Notice of Meeting

    Science.gov (United States)

    2013-10-30

    ..., which was published in the Federal Register on July 18, 2013, 78 FR 42970. The meeting notice is amended... HUMAN SERVICES National Institutes of Health National Institute of Biomedical Imaging and Bioengineering... Biomedical Imaging and Bioengineering Special Emphasis Panel, October 10-11, 2013, 03:00 p.m.-06:00...

  1. 78 FR 64519 - National Institute of Biomedical Imaging and Bioengineering; Amended Notice of Meeting

    Science.gov (United States)

    2013-10-29

    ..., which was published in the Federal Register on June 21, 2013, 78 FR 37557. The meeting notice is amended... HUMAN SERVICES National Institutes of Health National Institute of Biomedical Imaging and Bioengineering... Biomedical Imaging and Bioengineering Special Emphasis Panel, October 3, 2013, 8:30 a.m. to 5:00...

  2. 78 FR 66755 - National Institute of Biomedical Imaging and Bioengineering; Amended Notice of Meeting

    Science.gov (United States)

    2013-11-06

    ..., which was published in the Federal Register on August 2, 2013, 78 FR 46995. The meeting notice is... HUMAN SERVICES National Institutes of Health National Institute of Biomedical Imaging and Bioengineering... Biomedical Imaging and Bioengineering Special Emphasis Panel, October 10-11, 2013, 09:00 a.m.-08:00...

  3. 78 FR 55268 - National Institute of Biomedical Imaging and Bioengineering Amended; Notice of Meeting

    Science.gov (United States)

    2013-09-10

    ... From the Federal Register Online via the Government Publishing Office DEPARTMENT OF HEALTH AND HUMAN SERVICES National Institutes of Health National Institute of Biomedical Imaging and Bioengineering... Biomedical Imaging and Bioengineering Special Emphasis Panel, November 6, 2013, 8:00 a.m. to 5:00...

  4. Chemometric Methods for Biomedical Raman Spectroscopy and Imaging

    Science.gov (United States)

    Reddy, Rohith K.; Bhargava, Rohit

    The vibrational spectrum is a quantitative measure of a sample's molecular composition. Hence, classical chemometric methods, especially regression-based, have focused on exact mapping between identity and sample composition. While this approach works well for molecular identifications and scientific investigations, problems of biomedical interest often involve complex mixtures of stochastically varying compositions and complex spatial distributions of molecules contributing to the recorded signals. Hence, the challenge often is not to predict the identity of materials but to determine chemical markers that help rapidly detect species (e.g. impurities, conformations, strains of bacteria) in large areas or indicate changes in function in complex tissue (e.g. cancer or tissue engineering). Hence, the rate of data analysis has to be rapid, has to be robust with respect to stochastic variance and the provided information is usually related to biomedical context and not to molecular compositions. The emergence of imaging techniques and clinical applications are spurring growth in this area. In this chapter, we discuss chemometric methods that are useful in this milieu. We first review methods for data pre-processing with a focus on the key challenges facing a spectroscopist. Next, we survey some of the well known, widely used pattern classification techniques under the framework of supervised and unsupervised classification. We discuss the applicability, advantages and drawbacks of each of these techniques and help the reader not only gain useful insights into the techniques themselves but also acquire an understating of the underlying ideas and principles. We conclude by providing examples of the coupled use of chemometric and statistical tools to develop robust classification protocols for prostate and breast tissue pathology. We specifically focus on the critical factors and pitfalls at each step in converting spectral data sets into hi-fidelity images useful for

  5. Mathematical Morphology Techniques For Image Processing Applications In Biomedical Imaging

    Science.gov (United States)

    Bartoo, Grace T.; Kim, Yongmin; Haralick, Robert M.; Nochlin, David; Sumi, Shuzo M.

    1988-06-01

    Mathematical morphology operations allow object identification based on shape and are useful for grouping a cluster of small objects into one object. Because of these capabilities, we have implemented and evaluated this technique for our study of Alzheimer's disease. The microscopic hallmark of Alzheimer's disease is the presence of brain lesions known as neurofibrillary tangles and senile plaques. These lesions have distinct shapes compared to normal brain tissue. Neurofibrillary tangles appear as flame-shaped structures, whereas senile plaques appear as circular clusters of small objects. In order to quantitatively analyze the distribution of these lesions, we have developed and applied the tools of mathematical morphology on the Pixar Image Computer. As a preliminary test of the accuracy of the automatic detection algorithm, a study comparing computer and human detection of senile plaques was performed by evaluating 50 images from 5 different patients. The results of this comparison demonstrates that the computer counts correlate very well with the human counts (correlation coefficient = .81). Now that the basic algorithm has been shown to work, optimization of the software will be performed to improve its speed. Also future improvements such as local adaptive thresholding will be made to the image analysis routine to further improve the systems accuracy.

  6. Modality prediction of biomedical literature images using multimodal feature representation

    Directory of Open Access Journals (Sweden)

    Pelka, Obioma

    2016-08-01

    Full Text Available This paper presents the modelling approaches performed to automatically predict the modality of images found in biomedical literature. Various state-of-the-art visual features such as Bag-of-Keypoints computed with dense SIFT descriptors, texture features and Joint Composite Descriptors were used for visual image representation. Text representation was obtained by vector quantisation on a Bag-of-Words dictionary generated using attribute importance derived from a χ-test. Computing the principal components separately on each feature, dimension reduction as well as computational load reduction was achieved. Various multiple feature fusions were adopted to supplement visual image information with corresponding text information. The improvement obtained when using multimodal features vs. visual or text features was detected, analysed and evaluated. Random Forest models with 100 to 500 deep trees grown by resampling, a multi class linear kernel SVM with C=0.05 and a late fusion of the two classifiers were used for modality prediction. A Random Forest classifier achieved a higher accuracy and computed Bag-of-Keypoints with dense SIFT descriptors proved to be a better approach than with Lowe SIFT.

  7. Biomedical scientist training officers' evaluation of integrated (co-terminus) Applied Biomedical Science BSc programmes: a multicentre study.

    Science.gov (United States)

    Pitt, S J; Cunningham, J M

    2011-01-01

    The introduction of the Institute of Biomedical Science (IBMS) portfolio for pre-registration training in 2003 allowed universities to develop integrated (co-terminus) biomedical science BSc programmes. Students undertake structured placements within clinical pathology laboratories as part of their degree. The clinical training and professional development of students is undertaken by training officers (TOs), who are experienced Health Professions Council (HPC)-registered biomedical scientists and usually also members of the IBMS. This study aims to evaluate TOs' perceptions of these integrated degrees as a means of delivering pre-registration training for biomedical scientists. A questionnaire to collect quantitative data and be completed anonymously was sent to TOs, via staff at participating universities. Items considered TOs' perceptions in four categories: how well students fitted into the laboratory team, their professional and scientific development, the impact of delivering integrated degrees on service delivery, and the commitment to training students. Surveys took place in 2007, 2008 and 2009 and involved TOs taking students from 10, 14 and 17 universities each year, respectively. The response rates to the survey were 60% in 2007, 34% in 2008 and 12% in 2009. Participants were representative in terms of age, gender and pathology discipline and had a broad range of experience with students. The overall mean score for TOs perceptions was 3.38 in 2007 which increased significantly to 3.99 in 2009 (Kruskall Wallis test chi2 = 21.13, P<0.01). Mean scores in three of the four categories were positive in 2007, although the impact on service delivery was perceived negatively. In all areas, means were significantly greater in 2009. The results indicate that TOs view the integrated degrees favourably and are happy with the scientific and professional development of students. Although designing training sessions suitable for undergraduates took extra work initially

  8. Rational design of nanoparticles for biomedical imaging and photovoltaic applications

    Energy Technology Data Exchange (ETDEWEB)

    Qin, Haiyan

    2011-07-01

    This thesis aims to rationally design nanoparticles and promote their applications in biomedical imaging and photovoltaic cells. Quantum dots (QDs) are promising fluorescent probes for biomedical imaging. We have fabricated two types of MSA capped QDs: CdTe/ZnSe core/shell QDs synthesized via an aqueous method and CdTe QDs via a hydrothermal method. They present high quantum yields (QYs), narrow emission band widths, high photo- and pH-stability, and low cytotoxicity. QD-IgG probes were produced and applied for labeling breast cancer marker HER2 proteins on MCF-7 cells. For the purpose of single molecule tracking using QDs as fluorescent probes, we use small affibodies instead of antibodies to produce QD-affibody probes. Smaller QD-target protein complexes are obtained using a direct immunofluorescence approach. These QD-affibody probes are developed to study the dynamic motion of single HER2 proteins on A431 cell membranes. Fluorescence blinking in single QDs is harmful for dynamic tracking due to information loss. We have experimentally studied the blinking phenomenon and the mechanism behind. We have discovered an emission bunching effect that two nearby QDs tend to emit light synchronously. The long-range Coulomb potential induced by the negative charge on the QD surface is found to be the major cause for the single QD blinking and the emission bunching in QD pairs. We have studied the in vitro cytotoxicity of CdTe QDs to human umbilical vein endothelial cells (HUVECs). The QDs treatment increases the intracellular reactive oxygen species (ROS) level and disrupts the mitochondrial membrane potential. The protein expression levels indicate that the mitochondria apoptosis is the main cause of HUVCEs apoptosis induced by CdTe QDs. Gold nanorods (GNRs) are scattering probes due to their tunable surface plasmon resonance (SPR) enhanced scattering spectrum. In order to control the yield and morphology of GNRs, we have systematically studied the effects of composition

  9. Race and Genetics: Controversies in Biomedical, Behavioral, and Forensic Sciences

    Science.gov (United States)

    Ossorio, Pilar; Duster, Troy

    2005-01-01

    Among biomedical scientists, there is a great deal of controversy over the nature of race, the relevance of racial categories for research, and the proper methods of using racial variables. This article argues that researchers and scholars should avoid a binary-type argument, in which the question is whether to use race always or never.…

  10. The Faculty Costs to Educate a Biomedical Sciences Graduate Student

    Science.gov (United States)

    Smolka, Adam J.; Halushka, Perry V.; Garrett-Mayer, Elizabeth

    2015-01-01

    Academic medical centers nationwide face numerous fiscal challenges resulting from implementation of restructured healthcare delivery models, contracting state support for higher education, and increased competition for federal and other sources of biomedical research funding. In pursuing greater accountability and transparency in its fiscal…

  11. Bridging the social and the biomedical: engaging the social and political sciences in HIV research

    OpenAIRE

    Kippax Susan C; Holt Martin; Friedman Samuel R

    2011-01-01

    Abstract This supplement to the Journal of the International AIDS Society focuses on the engagement of the social and political sciences within HIV research and, in particular, maintaining a productive relationship between social and biomedical perspectives on HIV. It responds to a number of concerns raised primarily by social scientists, but also recognized as important by biomedical and public health researchers. These concerns include how best to understand the impact of medical technologi...

  12. The Role Biomedical Science Laboratories Can Play in Improving Science Knowledge and Promoting First-Year Nursing Academic Success

    Science.gov (United States)

    Arneson, Pam

    2011-01-01

    The need for additional nursing and health care professionals is expected to increase dramatically over the next 20 years. With this in mind, students must have strong biomedical science knowledge to be competent in their field. Some studies have shown that participation in bioscience laboratories can enhance science knowledge. If this is true, an…

  13. Keynote Lecture: The Problems and Challenges in Biomedical Sciences

    Directory of Open Access Journals (Sweden)

    Bruce Albert

    2015-08-01

    Full Text Available Distressed by the perverse incentives that have generated the current hyper-competitive biomedical research environment in the United States, four of us published an open-access article in April 2014 entitled: Rescuing US biomedical research from its systemic flaws (Alberts, B., Kirschner, Marc W., Tilghman, Shirley, and  Varmus, H.; Proc. Natl. Acad. Sci. USA 111, 5773-5777 (2014. As announced in our follow-up piece, Opinion: Addressing systemic problems in the biomedical research enterprise (Proc. Natl. Acad. Sci. USA 112, 1912-1913 (2015, we have formed a 16-member steering committee to oversee a new website that is designed to collect suggestions for actions that can ameliorate the identified problems, as well as to highlight promising changes that are either underway or proposed (see http://rescuingbiomedicalresearch.org.  Despite widespread agreement concerning the problems, any substantial change in the system is bound to be controversial. Experiments are therefore needed. In my talk, I will outline some possible ideas for overcoming the inertia that prevents moving forward.We are encouraging both national and international contributions to this effort, since the problems that we have described are by no means unique to the United States.

  14. Biomedical Image Processing with Morphology and Segmentation Methods for Medical Image Analysis

    Directory of Open Access Journals (Sweden)

    Joyjit Patra

    2013-07-01

    Full Text Available Modern three-dimensional (3-D medical imaging offers the potential and promise for major advances in science and medicine as higher fidelity images are produced.It has developed into one of the most important fields within scientific imaging due to the rapid and continuing progress in computerized medical image visualization and advances in analysis methods and computer-aided diagnosis[1],and is now,for example,a vital part of the early detection,diagnosis, and treatment of cancer.The challenge is to effectively process and analyze the images in order to effectively extract, quantify,and interpret this information to gain understanding and insight into the structure and function of the organs being imaged.The general goal is to understand the information and put it to practical use.A multitude of diagnostic medical imaging systems are used to probe the human body.They comprise both microscopic (viz. cellular level and macroscopic (viz.organ and systems level modalities.Interpretation of the resulting images requires sophisticated image processing methods that enhance visual interpretation and image analysis methods that provide automated or semiautomated tissue detection,measurement, and characterization [2–4].In general,multiple transformations will be needed in order to extract the data of interest from an image,and a hierarchy in the processing steps will be evident, e.g., enhancement will precede restoration,which will precede analysis,feature extraction,and classification[5].Often,these are performed sequentially, but more sophisticated tasks will require feedback of parameters to preceding steps so that the processing includes a number of iterative loops.Segmentation is one of the key tools in medical image analysis.The objective of segmentation is to provide reliable, fast, and effective organ delineation.While traditionally, particularly in computer vision, segmentation is seen as an early vision tool used for subsequent recognition

  15. Polymers in life sciences: Pharmaceutical and biomedical applications

    Science.gov (United States)

    Barba, Anna Angela; Dalmoro, Annalisa; d'Amore, Matteo; Lamberti, Gaetano; Cascone, Sara; Titomanlio, Giuseppe

    2015-12-01

    This paper deals with the work done by prof. Titomanlio and his group in the fields of pharmaceutical and biomedical applications of polymers. In particular, the main topics covered are: i) controlled drug release from pharmaceuticals based on hydrogel for oral delivery of drugs; ii) production and characterization of micro and nanoparticles based on stimuli-responsive polymers; iii) use of polymers for coronary stent gel-paving; iv) design and realization of novel methods (in-vitro and in-silico) to test polymer-based pharmaceuticals.

  16. Biomedical technical transfer. Applications of NASA science and technology

    Science.gov (United States)

    1976-01-01

    Lower body negative pressure testing in cardiac patients has been completed as well as the design and construction of a new leg negative unit for evaluating heart patients. This technology is based on NASA research, using vacuum chambers to stress the cardiovascular system during space flight. Additional laboratory tests of an intracranial pressure transducer, have been conducted. Three new biomedical problems to which NASA technology is applicable are also identified. These are: a communication device for the speech impaired, the NASA development liquid-cooled garment, and miniature force transducers for heart research.

  17. Modern technologies for retinal scanning and imaging: an introduction for the biomedical engineer.

    Science.gov (United States)

    Gramatikov, Boris I

    2014-01-01

    This review article is meant to help biomedical engineers and nonphysical scientists better understand the principles of, and the main trends in modern scanning and imaging modalities used in ophthalmology. It is intended to ease the communication between physicists, medical doctors and engineers, and hopefully encourage "classical" biomedical engineers to generate new ideas and to initiate projects in an area which has traditionally been dominated by optical physics. Most of the methods involved are applicable to other areas of biomedical optics and optoelectronics, such as microscopic imaging, spectroscopy, spectral imaging, opto-acoustic tomography, fluorescence imaging etc., all of which are with potential biomedical application. Although all described methods are novel and important, the emphasis of this review has been placed on three technologies introduced in the 1990's and still undergoing vigorous development: Confocal Scanning Laser Ophthalmoscopy, Optical Coherence Tomography, and polarization-sensitive retinal scanning.

  18. Establishment of an index system for evaluating outstanding biomedical scientists for science foundation of Shanghai

    Institute of Scientific and Technical Information of China (English)

    ZHANG Yu-jing; CHEN Xin; REN Xu-feng

    2007-01-01

    Objective:To establish a scientific, objective and applicable index system for evaluating outstanding biomedical scientists for science foundation of Shanghai. Methods: According to the principal indices that have been used in the developed countries for evaluating their talented personnel and the reality of our country, an index system was set up to evaluate the outstanding biomedical scientists for Shanghai science foundation. The following parameters were used to simplify the indices: correlation coefficient,multiple correlation coefficient, partial correlation coefficient, creditability, and discriminatory power.And analytic hierarchy process was used to determine the weights of each index. Results and Conclusions:The established index system is scientific and applicable; it is helpful for cultivating and evaluating outstanding biomedical scientists.

  19. Biomedical Image Edge Detection using an Ant Colony Optimization Based on Artificial Neural Networks

    Directory of Open Access Journals (Sweden)

    Javad Rahebi

    2011-12-01

    Full Text Available Ant colony optimization (ACO is the algorithm that has inspired from natural behavior of ants life, which the ants leaved pheromone to search food on the ground. In this paper, ACO is introduced for resolving the edge detection in the biomedical image. Edge detection method based on ACO is able to create a matrix pheromone that shows information of available edge in each location of edge pixel which is created based on the movements of a number of ants on the biomedical image. Moreover, the movements of these ants are created by local fluctuation of biomedical image intensity values. The detected edge biomedical images have low quality rather than detected edge biomedical image resulted of a classic mask and won’t result application of these masks to edge detection biomedical image obtained of ACO. In proposed method, we use artificial neuralnetwork with supervised learning along with momentum to improve edge detection based on ACO. The experimental results shows that make use neural network are very effective in edge detection based on ACO.

  20. Biomedical and environmental sciences programs at the Oak Ridge National Laboratory

    Energy Technology Data Exchange (ETDEWEB)

    Richmond, C.R.; Johnson, C.A.

    1988-02-01

    This progress report summarizes the research and development activities conducted in the Biomedical and Environmental Sciences Programs of Oak Ridge National Laboratory. The report is structured to provide descriptions of current activities and accomplishments in each of the major organizational units. Following the accounts of research programs, is a list of publications and awards to its members. 6 figs., 14 tabs.

  1. [Application of the life sciences platform based on oracle to biomedical informations].

    Science.gov (United States)

    Zhao, Zhi-Yun; Li, Tai-Huan; Yang, Hong-Qiao

    2008-03-01

    The life sciences platform based on Oracle database technology is introduced in this paper. By providing a powerful data access, integrating a variety of data types, and managing vast quantities of data, the software presents a flexible, safe and scalable management platform for biomedical data processing. PMID:18581881

  2. The impact of blended learning technologies on student performance/learning in biomedical science higher education

    OpenAIRE

    Heugh, Sheelagh Mary Bernadette

    2015-01-01

    This study examines the benefits of learning innovations in e-learning (asynchronous classrooms only) and blended learning (asynchronous virtual classrooms plus traditional learning) compared to traditional learning (classroom lectures). It specifically investigates effects on student satisfaction, retention, progression and achievement. We focussed on core biomedical science modules at London Metropolitan University: and four such modules were electronically supported using a learning and co...

  3. A New Voice in Science : Patient participation in decision-making on biomedical research

    NARCIS (Netherlands)

    Caron-Flinterman, J.F.

    2005-01-01

    End-users are increasingly involved in decision-making concerning science and technology. This dissertation focuses on a specific kind of end-user participation: patient participation in decision-making on bio-medical research. Since patients can be considered relevant experts and stakeholders with

  4. Biomedical and environmental sciences programs at the Oak Ridge National Laboratory

    International Nuclear Information System (INIS)

    This progress report summarizes the research and development activities conducted in the Biomedical and Environmental Sciences Programs of Oak Ridge National Laboratory. The report is structured to provide descriptions of current activities and accomplishments in each of the major organizational units. Following the accounts of research programs, is a list of publications and awards to its members. 6 figs., 14 tabs

  5. Biomedical technology transfer: Applications of NASA science and technology

    Science.gov (United States)

    1976-01-01

    The major efforts of the Stanford Biomedical Applications Team Program at the Stanford University School of Medicine for the period from October 1, 1975 to September 31, 1976 are covered. A completed EMG biotelemetry system which monitors the physiological signals of man and animals in space related research is discussed. The results of a pilot study involving lower body negative pressure testing in cardiac patients has been completed as well as the design and construction of a new leg negative pressure unit for evaluating heart patients. This technology utilizes vacuum chambers to stress the cardiovascular system during space flight. Laboratory tests of an intracranial pressure transducer, have been conducted. Extremely stable long term data using capacative pressure sensors has lead to the order of commercially manufactured monitoring systems base. Projects involving commercialization are: flexible medical electrodes, an echocardioscope, a miniature biotelemetry system, and an on-line ventricular contour detector.

  6. Drug design and discovery: translational biomedical science varies among countries.

    Science.gov (United States)

    Weaver, Ian N; Weaver, Donald F

    2013-10-01

    Drug design and discovery is an innovation process that translates the outcomes of fundamental biomedical research into therapeutics that are ultimately made available to people with medical disorders in many countries throughout the world. To identify which nations succeed, exceed, or fail at the drug design/discovery endeavor--more specifically, which countries, within the context of their national size and wealth, are "pulling their weight" when it comes to developing medications targeting the myriad of diseases that afflict humankind--we compiled and analyzed a comprehensive survey of all new drugs (small molecular entities and biologics) approved annually throughout the world over the 20-year period from 1991 to 2010. Based upon this analysis, we have devised prediction algorithms to ascertain which countries are successful (or not) in contributing to the worldwide need for effective new therapeutics.

  7. Beyond Preparation: Identity, Cultural Capital, and Readiness for Graduate School in the Biomedical Sciences

    OpenAIRE

    Gazley, J. Lynn; Remich, Robin; Naffziger-Hirsch, Michelle E.; Keller, Jill; Campbell, Patricia B.; McGee, Richard

    2014-01-01

    In this study, we conducted in-depth interviews with 52 college graduates as they entered a Postbaccalaureate Research Education Program (PREP). Our goal was to investigate what it means for these aspiring scientists, most of whom are from groups underrepresented in the sciences, to feel ready to apply to a doctoral program in the biomedical sciences. For our analysis, we developed and used a theoretical framework which integrates concepts from identity-in-practice literature with Bourdieu’s ...

  8. PREFACE: 2nd International Conference and Young Scientist School ''Magnetic resonance imaging in biomedical research''

    Science.gov (United States)

    Naumova, A. V.; Khodanovich, M. Y.; Yarnykh, V. L.

    2016-02-01

    The Second International Conference and Young Scientist School ''Magnetic resonance imaging in biomedical research'' was held on the campus of the National Research Tomsk State University (Tomsk, Russia) on September 7-9, 2015. The conference was focused on magnetic resonance imaging (MRI) applications for biomedical research. The main goal was to bring together basic scientists, clinical researchers and developers of new MRI techniques to bridge the gap between clinical/research needs and advanced technological solutions. The conference fostered research and development in basic and clinical MR science and its application to health care. It also had an educational purpose to promote understanding of cutting-edge MR developments. The conference provided an opportunity for researchers and clinicians to present their recent theoretical developments, practical applications, and to discuss unsolved problems. The program of the conference was divided into three main topics. First day of the conference was devoted to educational lectures on the fundamentals of MRI physics and image acquisition/reconstruction techniques, including recent developments in quantitative MRI. The second day was focused on developments and applications of new contrast agents. Multinuclear and spectroscopic acquisitions as well as functional MRI were presented during the third day of the conference. We would like to highlight the main developments presented at the conference and introduce the prominent speakers. The keynote speaker of the conference Dr. Vasily Yarnykh (University of Washington, Seattle, USA) presented a recently developed MRI method, macromolecular proton fraction (MPF) mapping, as a unique tool for modifying image contrast and a unique tool for quantification of the myelin content in neural tissues. Professor Yury Pirogov (Lomonosov Moscow State University) described development of new fluorocarbon compounds and applications for biomedicine. Drs. Julia Velikina and Alexey

  9. Graduate Experience in Science Education: the development of a science education course for biomedical science graduate students.

    Science.gov (United States)

    Markowitz, Dina G; DuPré, Michael J

    2007-01-01

    The University of Rochester's Graduate Experience in Science Education (GESE) course familiarizes biomedical science graduate students interested in pursuing academic career tracks with a fundamental understanding of some of the theory, principles, and concepts of science education. This one-semester elective course provides graduate students with practical teaching and communication skills to help them better relate science content to, and increase their confidence in, their own teaching abilities. The 2-h weekly sessions include an introduction to cognitive hierarchies, learning styles, and multiple intelligences; modeling and coaching some practical aspects of science education pedagogy; lesson-planning skills; an introduction to instructional methods such as case studies and problem-based learning; and use of computer-based instructional technologies. It is hoped that the early development of knowledge and skills about teaching and learning will encourage graduate students to continue their growth as educators throughout their careers. This article summarizes the GESE course and presents evidence on the effectiveness of this course in providing graduate students with information about teaching and learning that they will use throughout their careers.

  10. Graduate Experience in Science Education: the development of a science education course for biomedical science graduate students.

    Science.gov (United States)

    Markowitz, Dina G; DuPré, Michael J

    2007-01-01

    The University of Rochester's Graduate Experience in Science Education (GESE) course familiarizes biomedical science graduate students interested in pursuing academic career tracks with a fundamental understanding of some of the theory, principles, and concepts of science education. This one-semester elective course provides graduate students with practical teaching and communication skills to help them better relate science content to, and increase their confidence in, their own teaching abilities. The 2-h weekly sessions include an introduction to cognitive hierarchies, learning styles, and multiple intelligences; modeling and coaching some practical aspects of science education pedagogy; lesson-planning skills; an introduction to instructional methods such as case studies and problem-based learning; and use of computer-based instructional technologies. It is hoped that the early development of knowledge and skills about teaching and learning will encourage graduate students to continue their growth as educators throughout their careers. This article summarizes the GESE course and presents evidence on the effectiveness of this course in providing graduate students with information about teaching and learning that they will use throughout their careers. PMID:17785406

  11. International Conference for Innovation in Biomedical Engineering and Life Sciences

    CERN Document Server

    Usman, Juliana; Mohktar, Mas; Ahmad, Mohd

    2016-01-01

    This volumes presents the proceedings of ICIBEL 2015, organized by the Centre for Innovation in Medical Engineering (CIME) under Innovative Technology Research Cluster, University of Malaya. It was held in Kuala Lumpur, Malaysia, from 6-8 December 2015. The ICIBEL 2015 conference promotes the latest researches and developments related to the integration of the Engineering technology in medical fields and life sciences. This includes the latest innovations, research trends and concerns, challenges and adopted solution in the field of medical engineering and life sciences. .

  12. Reaching Consensus on Essential Biomedical Science Learning Objectives in a Dental Curriculum.

    Science.gov (United States)

    Best, Leandra; Walton, Joanne N; Walker, Judith; von Bergmann, HsingChi

    2016-04-01

    This article describes how the University of British Columbia Faculty of Dentistry reached consensus on essential basic biomedical science objectives for DMD students and applied the information to the renewal of its DMD curriculum. The Delphi Method was used to build consensus among dental faculty members and students regarding the relevance of over 1,500 existing biomedical science objectives. Volunteer panels of at least three faculty members (a basic scientist, a general dentist, and a dental specialist) and a fourth-year dental student were formed for each of 13 biomedical courses in the first two years of the program. Panel members worked independently and anonymously, rating each course objective as "need to know," "nice to know," "irrelevant," or "don't know." Panel members were advised after each round which objectives had not yet achieved a 75% consensus and were asked to reconsider their ratings. After a maximum of three rounds to reach consensus, a second group of faculty experts reviewed and refined the results to establish the biomedical science objectives for the renewed curriculum. There was consensus on 46% of the learning objectives after round one, 80% after round two, and 95% after round three. The second expert group addressed any remaining objectives as part of its review process. Only 47% of previous biomedical science course objectives were judged to be essential or "need to know" for the general dentist. The consensus reached by participants in the Delphi Method panels and a second group of faculty experts led to a streamlined, better integrated DMD curriculum to prepare graduates for future practice.

  13. Modern technologies for retinal scanning and imaging: an introduction for the biomedical engineer

    OpenAIRE

    Gramatikov, Boris I

    2014-01-01

    This review article is meant to help biomedical engineers and nonphysical scientists better understand the principles of, and the main trends in modern scanning and imaging modalities used in ophthalmology. It is intended to ease the communication between physicists, medical doctors and engineers, and hopefully encourage “classical” biomedical engineers to generate new ideas and to initiate projects in an area which has traditionally been dominated by optical physics. Most of the methods invo...

  14. Collaborative Initiative in Biomedical Imaging to Study Complex Diseases

    Energy Technology Data Exchange (ETDEWEB)

    Lin, Weili [The University of North Carolina at Chapel Hill; Fiddy, Michael A. [The University of North Carolina at Charlotte

    2012-03-31

    The work reported addressed these topics: Fluorescence imaging; Optical coherence tomography; X-ray interferometer/phase imaging system; Quantitative imaging from scattered fields, Terahertz imaging and spectroscopy; and Multiphoton and Raman microscopy.

  15. The placebo puzzle: examining the discordant space between biomedical science and illness/healing.

    Science.gov (United States)

    Pohlman, Shawn; Cibulka, Nancy J; Palmer, Janice L; Lorenz, Rebecca A; SmithBattle, Lee

    2013-03-01

    The placebo response presents an enigma to biomedical science: how can 'inert' or 'sham' procedures reduce symptoms and produce physiological changes that are comparable to prescribed treatments? In this study, we examine this puzzle by explicating the discordant space between the prevailing biomedical paradigm, which focuses on a technical understanding of diagnosis and treatment, and a broader understanding of illness and healing as relational and embodied. Although biomedical achievements are impressive, the knowledge resulting from this paradigm is limited by its ontological and epistemological assumptions. When the body and world are objectified, illness meanings, therapeutic relationships, and healing practices are dismissed or distorted. In spite of a robust critique of the tenets of biomedicine for guiding practice, the biomedical paradigm retains a tenacious hold on evidence-based medicine and nursing, downplaying our clinical understanding of the sentient body, patients' life-worlds, and illness and healing. In reality, skilled nurses rely on multiple forms of knowledge in providing high-quality care to particular patients. Clinically wise nurses integrate their experience and knowledge of patients' priorities, fears, and illness trajectories along with biomedical findings to make astute judgments and promote health and healing.

  16. Applying Nanotechnology to Human Health: Revolution in Biomedical Sciences

    Directory of Open Access Journals (Sweden)

    Siddhartha Shrivastava

    2009-01-01

    Full Text Available Recent research on biosystems at the nanoscale has created one of the most dynamic science and technology domains at the confluence of physical sciences, molecular engineering, biology, biotechnology, and medicine. This domain includes better understanding of living and thinking systems, revolutionary biotechnology processes, synthesis of new drugs and their targeted delivery, regenerative medicine, neuromorphic engineering, and developing a sustainable environment. Nanobiosystems research is a priority in many countries and its relevance within nanotechnology is expected to increase in the future. The realisation that the nanoscale has certain properties needed to solve important medical challenges and cater to unmet medical needs is driving nanomedical research. The present review explores the significance of nanoscience and latest nanotechnologies for human health. Addressing the associated opportunities, the review also suggests how to manage far-reaching developments in these areas.

  17. Biomedical Image Processing Using FCM Algorithm Based on the Wavelet Transform

    Institute of Scientific and Technical Information of China (English)

    YAN Yu-hua; WANG Hui-min; LI Shi-pu

    2004-01-01

    An effective processing method for biomedical images and the Fuzzy C-mean (FCM) algorithm based on the wavelet transform are investigated.By using hierarchical wavelet decomposition, an original image could be decomposed into one lower image and several detail images. The segmentation started at the lowest resolution with the FCM clustering algorithm and the texture feature extracted from various sub-bands. With the improvement of the FCM algorithm, FCM alternation frequency was decreased and the accuracy of segmentation was advanced.

  18. Truth in basic biomedical science will set future mankind free.

    Science.gov (United States)

    Ling, Gilbert N

    2011-01-01

    It is self-evident that continued wellbeing and prosperity of our species in time to come depends upon a steady supply of major scientific and technologic innovations. However, major scientific and technical innovations are rare. As a rule, they grow only in the exceptionally fertile minds of men and women, who have fully mastered the underlying basic sciences. To waken their interest in science at an early critical age and to nurture and enhance that interest afterward, good textbooks at all level of education that accurately portray the relevant up-to-date knowledge are vital. As of now, the field of science that offers by far the greatest promise for the future of humanity is the science of life at the most basic cell and below-cell level. Unfortunately, it is precisely this crucial part of the (standardized) biological textbooks for all high schools and colleges in the US and abroad that have become, so to speak, fossilized. As a result, generation after generation of (educated) young men and women have been and are still being force-fed as established scientific truth an obsolete membrane (pump) theory, which has been categorically disproved half a century ago (see Endnote 1.) To reveal this Trojan horse of a theory for what it really is demands the concerted efforts of many courageous individuals especially young biology teachers who take themselves and their career seriously. But even the most courageous and the most resourceful won't find the task easy. To begin with, they would find it hard to access the critical scientific knowledge, with which to convert the skeptic and to rally the friendly. For the wealth of mutually supportive evidence against the membrane (pump) theory are often hidden in inaccessible publications and/or in languages other than English. To overcome this seemingly trivial but in fact formidable obstacle and to reveal the beauty and coherence of the existing but untaught truth, I put together in this small package a collection of the

  19. Using Biomedically Relevant Multimedia Content in an Introductory Physics Course for Life Science and Pre-Health Students

    Science.gov (United States)

    Mylott, Elliot; Kutschera, Ellynne; Dunlap, Justin C.; Christensen, Warren; Widenhorn, Ralf

    2016-01-01

    We will describe a one-quarter pilot algebra-based introductory physics course for pre-health and life science majors. The course features videos with biomedical experts and cogent biomedically inspired physics content. The materials were used in a flipped classroom as well as an all-online environment where students interacted with multimedia…

  20. A novel lossless robust watermarking method for copyright protection of biomedical image.

    Science.gov (United States)

    Chen, Zhigang; Deng, Xiaohong; Zeng, Feng; Liu, Huiwen; Chen, Liang

    2013-03-01

    Nanoscience and Nanotechnology promotes the development of biomedical imaging devices, more and more valuable biomedical images are transmitted through the open network, and their copyright suffers a major challenge. This paper proposes a new lossless robust watermarking method to realize biomedical image's copyright protection. For high-resolution biomedical images, the redundant theory and histogram shifting method based on image block's difference are utilized to repeatedly embed copyright watermark into different color channels. In the extracting procedure, each layer's watermark information can be extracted from watermarked image respectively, and the final watermark is judged by the voting theory. The redundant scheme and voting theory guarantees the watermark can resist against random noise's attack well. Besides, in order to reduce the watermark overhead in embedding procedure, the histogram narrowing down technique is used to tackle with those image blocks would overflows and underflows. Experimental results showed that the proposed method outperformed the existing semi-fragile reversible watermarking scheme and provided a great robustness against moderate JPEG compression and salt-pepper and Gaussian noise.

  1. Integrating Contemplative Tools into Biomedical Science Education and Research Training Programs

    Directory of Open Access Journals (Sweden)

    Rodney R. Dietert

    2014-01-01

    Full Text Available Academic preparation of science researchers and/or human or veterinary medicine clinicians through the science, technology, engineering, and mathematics (STEM curriculum has usually focused on the students (1 acquiring increased disciplinary expertise, (2 learning needed methodologies and protocols, and (3 expanding their capacity for intense, persistent focus. Such educational training is effective until roadblocks or problems arise via this highly-learned approach. Then, the health science trainee may have few tools available for effective problem solving. Training to achieve flexibility, adaptability, and broadened perspectives using contemplative practices has been rare among biomedical education programs. To address this gap, a Cornell University-based program involving formal biomedical science coursework, and health science workshops has been developed to offer science students, researchers and health professionals a broader array of personal, contemplation-based, problem-solving tools. This STEM educational initiative includes first-person exercises designed to broaden perceptional awareness, decrease emotional drama, and mobilize whole-body strategies for creative problem solving. Self-calibration and journaling are used for students to evaluate the personal utility of each exercise. The educational goals are to increase student self-awareness and self-regulation and to provide trainees with value-added tools for career-long problem solving. Basic elements of this educational initiative are discussed using the framework of the Tree of Contemplative Practices.

  2. Biomedical technology transfer. Applications of NASA science and technology

    Science.gov (United States)

    Harrison, D. C.

    1980-01-01

    Ongoing projects described address: (1) intracranial pressure monitoring; (2) versatile portable speech prosthesis; (3) cardiovascular magnetic measurements; (4) improved EMG biotelemetry for pediatrics; (5) ultrasonic kidney stone disintegration; (6) pediatric roentgen densitometry; (7) X-ray spatial frequency multiplexing; (8) mechanical impedance determination of bone strength; (9) visual-to-tactile mobility aid for the blind; (10) Purkinje image eyetracker and stabilized photocoalqulator; (11) neurological applications of NASA-SRI eyetracker; (12) ICU synthesized speech alarm; (13) NANOPHOR: microelectrophoresis instrument; (14) WRISTCOM: tactile communication system for the deaf-blind; (15) medical applications of NASA liquid-circulating garments; and (16) hip prosthesis with biotelemetry. Potential transfer projects include a person-portable versatile speech prosthesis, a critical care transport sytem, a clinical information system for cardiology, a programmable biofeedback orthosis for scoliosis a pediatric long-bone reconstruction, and spinal immobilization apparatus.

  3. Bio-medical X-ray imaging with spectroscopic pixel detectors

    CERN Document Server

    Butler, A P H; Tipples, R; Cook, N; Watts, R; Meyer, J; Bell, A J; Melzer, T R; Butler, P H

    2008-01-01

    The aim of this study is to review the clinical potential of spectroscopic X-ray detectors and to undertake a feasibility study using a novel detector in a clinical hospital setting. Detectors currently in development, such as Medipix-3, will have multiple energy thresholds allowing for routine use of spectroscopic bio-medical imaging. We have coined the term MARS (Medipix All Resolution System) for bio-medical images that provide spatial, temporal, and energy information. The full clinical significance of spectroscopic X-ray imaging is difficult to predict but insights can be gained by examining both image reconstruction artifacts and the current uses of dual-energy techniques. This paper reviews the known uses of energy information in vascular imaging and mammography, clinically important fields. It then presents initial results from using Medipix-2, to image human tissues within a clinical radiology department. Detectors currently in development, such as Medipix-3, will have multiple energy thresholds allo...

  4. Biomedical image analysis recipes in Matlab for life scientists and engineers

    CERN Document Server

    Reyes-Aldasoro, Constantino Carlos

    2015-01-01

    As its title suggests, this innovative book has been written for life scientists needing to analyse their data sets, and programmers, wanting a better understanding of the types of experimental images life scientists investigate on a regular basis. Each chapter presents one self-contained biomedical experiment to be analysed. Part I of the book presents its two basic ingredients: essential concepts of image analysis and Matlab. In Part II, algorithms and techniques are shown as series of 'recipes' or solved examples that show how specific techniques are applied to a biomedical experiments like

  5. BETWEEN REASON, SCIENCE AND CULTURE: BIOMEDICAL DECISION-MAKING.

    Science.gov (United States)

    Fortin, Sylvie

    2015-12-01

    Over the last decade, we have extensively examined clinical practice in the context of sociocultural, religious and ethnic diversity. Stemming mainly from data collected amongst physicians we reflect, in this paper, upon the norms and values which guide decision-making processes in tertiary pediatric hospital contexts. Clinical ethics is portrayed a neutral guide between competing choices and obligations of hospital units, healthcare professionals, and families, when there is a conflict or divergence in the perspectives concerning the progression of the clinical trajectory. We will chart the sharing/non-sharing of different voices in critical decision-making pathways of maternal-child hospital care. How do "universal" ethical principles accommodate the diversity of perspectives anchored within the ensemble of cultural, social, and religious institutions? Similarly to the image of cosmopolitan urban communities, health care settings are defined by a multiplicity of values brought forth by families and health care professionals from diverse backgrounds. Attempting to seize these logics entails a better grasp of the delicate relationship between the individual and the collective, between personal values and instituted norms, between majorities and minorities.

  6. Coherent anti-Stokes Raman scattering for label-free biomedical imaging

    International Nuclear Information System (INIS)

    Coherent anti-Stokes Raman scattering (CARS) has established itself as an imaging technique capable of providing video-rate imaging of biological specimens through vibrational coherence of endogenous molecules. Current techniques predominantly involve the application of costly, invasive and potentially non-specific dyes or labels for imaging biomolecules. CARS microscopy can however provide a high-resolution and non-invasive alternative for imaging biomolecules of interest without the need for exogenous labels. Here we provide an overview of CARS including the technique and common instrumentation as well as its applications in biomedical imaging. We discuss the major biomedical areas where CARS has been applied such as in evaluating liver disease, progression of atherosclerosis, tumour classification and tracking drug delivery, whilst also assessing the future challenges for clinical translation. (special issue article)

  7. Random laser illumination: an ideal source for biomedical polarization imaging?

    Science.gov (United States)

    Carvalho, Mariana T.; Lotay, Amrit S.; Kenny, Fiona M.; Girkin, John M.; Gomes, Anderson S. L.

    2016-03-01

    Imaging applications increasingly require light sources with high spectral density (power over spectral bandwidth. This has led in many cases to the replacement of conventional thermal light sources with bright light-emitting diodes (LEDs), lasers and superluminescent diodes. Although lasers and superluminescent diodes appear to be ideal light sources due to their narrow bandwidth and power, however, in the case of full-field imaging, their spatial coherence leads to coherent artefacts, such as speckle, that corrupt the image. LEDs, in contrast, have lower spatial coherence and thus seem the natural choice, but they have low spectral density. Random Lasers are an unconventional type of laser that can be engineered to provide low spatial coherence with high spectral density. These characteristics makes them potential sources for biological imaging applications where specific absorption and reflection are the characteristics required for state of the art imaging. In this work, a Random Laser (RL) is used to demonstrate speckle-free full-field imaging for polarization-dependent imaging in an epi-illumination configuration. We compare LED and RL illumination analysing the resulting images demonstrating that the RL illumination produces an imaging system with higher performance (image quality and spectral density) than that provided by LEDs.

  8. Resident's morning report: an opportunity to reinforce principles of biomedical science in a clinical context.

    Science.gov (United States)

    Brass, Eric P

    2013-01-01

    The principles of biochemistry are core to understanding cellular and tissue function, as well as the pathophysiology of disease. However, the clinical utility of biochemical principles is often obscure to clinical trainees. Resident's Morning Report is a common teaching conference in which residents present clinical cases of interest to a faculty member for discussion. This venue provides an opportunity to illustrate how basic biomedical principles facilitate an understanding of the clinical presentation, the relevant pathophysiology, and the rationale for diagnostic and therapeutic strategies. A discussion of biochemical principles can easily be incorporated into these case discussions, with the potential to reinforce these concepts and to illustrate their application to clinical decision making. This approach maintains the effort to teach basic biomedical sciences in the context of clinical application across the educational continuum.

  9. High-energy proton imaging for biomedical applications

    Science.gov (United States)

    Prall, M.; Durante, M.; Berger, T.; Przybyla, B.; Graeff, C.; Lang, P. M.; LaTessa, C.; Shestov, L.; Simoniello, P.; Danly, C.; Mariam, F.; Merrill, F.; Nedrow, P.; Wilde, C.; Varentsov, D.

    2016-01-01

    The charged particle community is looking for techniques exploiting proton interactions instead of X-ray absorption for creating images of human tissue. Due to multiple Coulomb scattering inside the measured object it has shown to be highly non-trivial to achieve sufficient spatial resolution. We present imaging of biological tissue with a proton microscope. This device relies on magnetic optics, distinguishing it from most published proton imaging methods. For these methods reducing the data acquisition time to a clinically acceptable level has turned out to be challenging. In a proton microscope, data acquisition and processing are much simpler. This device even allows imaging in real time. The primary medical application will be image guidance in proton radiosurgery. Proton images demonstrating the potential for this application are presented. Tomographic reconstructions are included to raise awareness of the possibility of high-resolution proton tomography using magneto-optics. PMID:27282667

  10. High-energy proton imaging for biomedical applications

    Science.gov (United States)

    Prall, M.; Durante, M.; Berger, T.; Przybyla, B.; Graeff, C.; Lang, P. M.; Latessa, C.; Shestov, L.; Simoniello, P.; Danly, C.; Mariam, F.; Merrill, F.; Nedrow, P.; Wilde, C.; Varentsov, D.

    2016-06-01

    The charged particle community is looking for techniques exploiting proton interactions instead of X-ray absorption for creating images of human tissue. Due to multiple Coulomb scattering inside the measured object it has shown to be highly non-trivial to achieve sufficient spatial resolution. We present imaging of biological tissue with a proton microscope. This device relies on magnetic optics, distinguishing it from most published proton imaging methods. For these methods reducing the data acquisition time to a clinically acceptable level has turned out to be challenging. In a proton microscope, data acquisition and processing are much simpler. This device even allows imaging in real time. The primary medical application will be image guidance in proton radiosurgery. Proton images demonstrating the potential for this application are presented. Tomographic reconstructions are included to raise awareness of the possibility of high-resolution proton tomography using magneto-optics.

  11. Endovascular Device Testing with Particle Image Velocimetry Enhances Undergraduate Biomedical Engineering Education

    Science.gov (United States)

    Nair, Priya; Ankeny, Casey J.; Ryan, Justin; Okcay, Murat; Frakes, David H.

    2016-01-01

    We investigated the use of a new system, HemoFlow™, which utilizes state of the art technologies such as particle image velocimetry to test endovascular devices as part of an undergraduate biomedical engineering curriculum. Students deployed an endovascular stent into an anatomical model of a cerebral aneurysm and measured intra-aneurysmal flow…

  12. Discovery informatics in biological and biomedical sciences: research challenges and opportunities.

    Science.gov (United States)

    Honavar, Vasant

    2015-01-01

    New discoveries in biological, biomedical and health sciences are increasingly being driven by our ability to acquire, share, integrate and analyze, and construct and simulate predictive models of biological systems. While much attention has focused on automating routine aspects of management and analysis of "big data", realizing the full potential of "big data" to accelerate discovery calls for automating many other aspects of the scientific process that have so far largely resisted automation: identifying gaps in the current state of knowledge; generating and prioritizing questions; designing studies; designing, prioritizing, planning, and executing experiments; interpreting results; forming hypotheses; drawing conclusions; replicating studies; validating claims; documenting studies; communicating results; reviewing results; and integrating results into the larger body of knowledge in a discipline. Against this background, the PSB workshop on Discovery Informatics in Biological and Biomedical Sciences explores the opportunities and challenges of automating discovery or assisting humans in discovery through advances (i) Understanding, formalization, and information processing accounts of, the entire scientific process; (ii) Design, development, and evaluation of the computational artifacts (representations, processes) that embody such understanding; and (iii) Application of the resulting artifacts and systems to advance science (by augmenting individual or collective human efforts, or by fully automating science). PMID:25592607

  13. Discovery informatics in biological and biomedical sciences: research challenges and opportunities.

    Science.gov (United States)

    Honavar, Vasant

    2015-01-01

    New discoveries in biological, biomedical and health sciences are increasingly being driven by our ability to acquire, share, integrate and analyze, and construct and simulate predictive models of biological systems. While much attention has focused on automating routine aspects of management and analysis of "big data", realizing the full potential of "big data" to accelerate discovery calls for automating many other aspects of the scientific process that have so far largely resisted automation: identifying gaps in the current state of knowledge; generating and prioritizing questions; designing studies; designing, prioritizing, planning, and executing experiments; interpreting results; forming hypotheses; drawing conclusions; replicating studies; validating claims; documenting studies; communicating results; reviewing results; and integrating results into the larger body of knowledge in a discipline. Against this background, the PSB workshop on Discovery Informatics in Biological and Biomedical Sciences explores the opportunities and challenges of automating discovery or assisting humans in discovery through advances (i) Understanding, formalization, and information processing accounts of, the entire scientific process; (ii) Design, development, and evaluation of the computational artifacts (representations, processes) that embody such understanding; and (iii) Application of the resulting artifacts and systems to advance science (by augmenting individual or collective human efforts, or by fully automating science).

  14. Measuring revolutionary biomedical science 1992-2006 using Nobel prizes, Lasker (clinical medicine) awards and Gairdner awards (NLG metric).

    Science.gov (United States)

    Charlton, Bruce G

    2007-01-01

    The Nobel prize for medicine or physiology, the Lasker award for clinical medicine, and the Gairdner international award are given to individuals for their role in developing theories, technologies and discoveries which have changed the direction of biomedical science. These distinctions have been used to develop an NLG metric to measure research performance and trends in 'revolutionary' biomedical science with the aim of identifying the premier revolutionary science research institutions and nations from 1992-2006. I have previously argued that the number of Nobel laureates in the biomedical field should be expanded to about nine per year and the NLG metric attempts to predict the possible results of such an expansion. One hundred and nineteen NLG prizes and awards were made during the past fifteen years (about eight per year) when overlapping awards had been removed. Eighty-five were won by the USA, revealing a massive domination in revolutionary biomedical science by this nation; the UK was second with sixteen awards; Canada had five, Australia four and Germany three. The USA had twelve elite centres of revolutionary biomedical science, with University of Washington at Seattle and MIT in first position with six awards and prizes each; Rockefeller University and Caltech were jointly second placed with five. Surprisingly, Harvard University--which many people rank as the premier world research centre--failed to reach the threshold of three prizes and awards, and was not included in the elite list. The University of Oxford, UK, was the only institution outside of the USA which featured as a significant centre of revolutionary biomedical science. Long-term success at the highest level of revolutionary biomedical science (and probably other sciences) probably requires a sufficiently large number of individually-successful large institutions in open competition with one another--as in the USA. If this model cannot be replicated within smaller nations, then it implies

  15. iMole, a web based image retrieval system from biomedical literature.

    Science.gov (United States)

    Giordano, Manuela; Natale, Massimo; Cornaz, Moreno; Ruffino, Andrea; Bonino, Dario; Bucci, Enrico M

    2013-07-01

    iMole is a platform that automatically extracts images and captions from biomedical literature. Images are tagged with terms contained in figure captions by means of a sophisticate text-mining tool. Moreover, iMole allows the user to upload directly their own images within the database and manually tag images by curated dictionary. Using iMole the researchers can develop a proper biomedical image database, storing the images extracted from paper of interest, image found on the web repositories, and their own experimental images. In order to show the functioning of the platform, we used iMole to build a 2DE database. Briefly, tagged 2DE gel images were collected and stored in a searchable 2DE gel database, available to users through an interactive web interface. Images were obtained by automatically parsing 16,608 proteomic publications, which yielded more than 16,500 images. The database can be further expanded by users with images of interest trough a manual uploading process. iMole is available with a preloaded set of 2DE gel data at http://imole.biodigitalvalley.com.

  16. Coded Aperture Imaging for Fluorescent X-rays-Biomedical Applications

    Energy Technology Data Exchange (ETDEWEB)

    Haboub, Abdel; MacDowell, Alastair; Marchesini, Stefano; Parkinson, Dilworth

    2013-06-01

    Employing a coded aperture pattern in front of a charge couple device pixilated detector (CCD) allows for imaging of fluorescent x-rays (6-25KeV) being emitted from samples irradiated with x-rays. Coded apertures encode the angular direction of x-rays and allow for a large Numerical Aperture x- ray imaging system. The algorithm to develop the self-supported coded aperture pattern of the Non Two Holes Touching (NTHT) pattern was developed. The algorithms to reconstruct the x-ray image from the encoded pattern recorded were developed by means of modeling and confirmed by experiments. Samples were irradiated by monochromatic synchrotron x-ray radiation, and fluorescent x-rays from several different test metal samples were imaged through the newly developed coded aperture imaging system. By choice of the exciting energy the different metals were speciated.

  17. Directional binary wavelet patterns for biomedical image indexing and retrieval.

    Science.gov (United States)

    Murala, Subrahmanyam; Maheshwari, R P; Balasubramanian, R

    2012-10-01

    A new algorithm for medical image retrieval is presented in the paper. An 8-bit grayscale image is divided into eight binary bit-planes, and then binary wavelet transform (BWT) which is similar to the lifting scheme in real wavelet transform (RWT) is performed on each bitplane to extract the multi-resolution binary images. The local binary pattern (LBP) features are extracted from the resultant BWT sub-bands. Three experiments have been carried out for proving the effectiveness of the proposed algorithm. Out of which two are meant for medical image retrieval and one for face retrieval. It is further mentioned that the database considered for three experiments are OASIS magnetic resonance imaging (MRI) database, NEMA computer tomography (CT) database and PolyU-NIRFD face database. The results after investigation shows a significant improvement in terms of their evaluation measures as compared to LBP and LBP with Gabor transform.

  18. Performance of a novel wafer scale CMOS active pixel sensor for bio-medical imaging

    OpenAIRE

    Esposito, M.; Anaxagoras, T; Konstantinidis, AC; Zheng, Y.; Speller, RD; Evans, PM; Allinson, NM; Wells, K

    2014-01-01

    Recently CMOS Active Pixels Sensors (APSs) have become a valuable alternative to amorphous Silicon and Selenium Flat Panel Imagers (FPIs) in bio-medical imaging applications. CMOS APSs can now be scaled up to the standard 20 cm diameter wafer size by means of a reticle stitching block process. However despite wafer scale CMOS APS being monolithic, sources of non-uniformity of response and regional variations can persist representing a significant challenge for wafer scale sensor response. Non...

  19. Interactive histology of large-scale biomedical image stacks.

    Science.gov (United States)

    Jeong, Won-Ki; Schneider, Jens; Turney, Stephen G; Faulkner-Jones, Beverly E; Meyer, Dominik; Westermann, Rüdiger; Reid, R Clay; Lichtman, Jeff; Pfister, Hanspeter

    2010-01-01

    Histology is the study of the structure of biological tissue using microscopy techniques. As digital imaging technology advances, high resolution microscopy of large tissue volumes is becoming feasible; however, new interactive tools are needed to explore and analyze the enormous datasets. In this paper we present a visualization framework that specifically targets interactive examination of arbitrarily large image stacks. Our framework is built upon two core techniques: display-aware processing and GPU-accelerated texture compression. With display-aware processing, only the currently visible image tiles are fetched and aligned on-the-fly, reducing memory bandwidth and minimizing the need for time-consuming global pre-processing. Our novel texture compression scheme for GPUs is tailored for quick browsing of image stacks. We evaluate the usability of our viewer for two histology applications: digital pathology and visualization of neural structure at nanoscale-resolution in serial electron micrographs.

  20. New Windows based Color Morphological Operators for Biomedical Image Processing

    Science.gov (United States)

    Pastore, Juan; Bouchet, Agustina; Brun, Marcel; Ballarin, Virginia

    2016-04-01

    Morphological image processing is well known as an efficient methodology for image processing and computer vision. With the wide use of color in many areas, the interest on the color perception and processing has been growing rapidly. Many models have been proposed to extend morphological operators to the field of color images, dealing with some new problems not present previously in the binary and gray level contexts. These solutions usually deal with the lattice structure of the color space, or provide it with total orders, to be able to define basic operators with required properties. In this work we propose a new locally defined ordering, in the context of window based morphological operators, for the definition of erosions-like and dilation-like operators, which provides the same desired properties expected from color morphology, avoiding some of the drawbacks of the prior approaches. Experimental results show that the proposed color operators can be efficiently used for color image processing.

  1. Image-based Informatics for Preclinical Biomedical Research

    Energy Technology Data Exchange (ETDEWEB)

    Tobin Jr, Kenneth William [ORNL; Aykac, Deniz [ORNL; Muthusamy Govindasamy, Vijaya Priya [ORNL; Karnowski, Thomas Paul [ORNL; Price, Jeffery R [ORNL; Wall, Jonathan [ORNL; Gregor, Jens [ORNL; Gleason, Shaun Scott [ORNL

    2006-01-01

    In 2006, the New England Journal of Medicine selected medical imaging as one of the eleven most important innovations of the past 1,000 years, primarily due to its ability to allow physicians and researchers to visualize the very nature of disease. As a result of the broad-based adoption of micro imaging technologies, preclinical researchers today are generating terabytes of image data from both anatomic and functional imaging modes. In this paper we describe our early research to apply content-based image retrieval to index and manage large image libraries generated in the study of amyloid disease in mice. Amyloidosis is associated with diseases such as Alzheimer's, type 2 diabetes, chronic inflammation and myeloma. In particular, we will focus on results to date in the area of small animal organ segmentation and description for CT, SPECT, and PET modes and present a small set of preliminary retrieval results for a specific disease state in kidney CT crosssections.

  2. Leading change: curriculum reform in graduate education in the biomedical sciences.

    Science.gov (United States)

    Dasgupta, Shoumita; Symes, Karen; Hyman, Linda

    2015-01-01

    The Division of Graduate Medical Sciences at the Boston University School of Medicine houses numerous dynamic graduate programs. Doctoral students began their studies with laboratory rotations and classroom training in a variety of fundamental disciplines. Importantly, with 15 unique pathways of admission to these doctoral programs, there were also 15 unique curricula. Departments and programs offered courses independently, and students participated in curricula that were overlapping combinations of these courses. This system created curricula that were not coordinated and that had redundant course content as well as content gaps. A partnership of key stakeholders began a curriculum reform process to completely restructure doctoral education at the Boston University School of Medicine. The key pedagogical goals, objectives, and elements designed into the new curriculum through this reform process created a curriculum designed to foster the interdisciplinary thinking that students are ultimately asked to utilize in their research endeavors. We implemented comprehensive student and peer evaluation of the new Foundations in Biomedical Sciences integrated curriculum to assess the new curriculum. Furthermore, we detail how this process served as a gateway toward creating a more fully integrated graduate experience, under the umbrella of the Program in Biomedical Sciences.

  3. Should there be greater use of preprint servers for publishing reports of biomedical science?

    Science.gov (United States)

    Chalmers, Iain; Glasziou, Paul

    2016-01-01

    Vitek Tracz and Rebecca Lawrence declare the current journal publishing system to be broken beyond repair. They propose that it should be replaced by immediate publication followed by transparent peer review as the starting place for more open and efficient reporting of science. While supporting this general objective, we suggest that research is needed both to understand why biomedical scientists have been slow to take up preprint options, as well as to assess the relative merits of this and other alternatives to journal publishing.

  4. Spacelab Life Sciences 3 biomedical research using the Rhesus Research Facility

    Science.gov (United States)

    Ballard, R. W.; Searby, N. D.; Stone, L. S.; Hogan, R. P.; Viso, M.; Venet, M.

    1992-01-01

    In 1985, a letter of agreement was signed between the French space agency, CNES, and NASA, formally initiating a joint venture called the RHESUS Project. The goal of this project is to provide a facility to fly rhesus monkeys (Macaca mulatta) to support spaceflight experiments which are applicable but not practical to carry out on human subjects. Biomedical investigations in behavior/performance, immunology/microbiology, muscle physiology, cardiopulmonary physiology, bone/calcium physiology, regulatory physiology, and neurophysiology disciplines will be performed. The Rhesus Research Facility, hardware capable of supporting two adult rhesus monkeys in a microgravity environment, is being developed for a first flight on Spacelab Life Sciences in early 1996.

  5. Differential equation analysis in biomedical science and engineering partial differential equation applications with R

    CERN Document Server

    Schiesser, William E

    2014-01-01

    Features a solid foundation of mathematical and computational tools to formulate and solve real-world PDE problems across various fields With a step-by-step approach to solving partial differential equations (PDEs), Differential Equation Analysis in Biomedical Science and Engineering: Partial Differential Equation Applications with R successfully applies computational techniques for solving real-world PDE problems that are found in a variety of fields, including chemistry, physics, biology, and physiology. The book provides readers with the necessary knowledge to reproduce and extend the com

  6. Differential equation analysis in biomedical science and engineering ordinary differential equation applications with R

    CERN Document Server

    Schiesser, William E

    2014-01-01

    Features a solid foundation of mathematical and computational tools to formulate and solve real-world ODE problems across various fields With a step-by-step approach to solving ordinary differential equations (ODEs), Differential Equation Analysis in Biomedical Science and Engineering: Ordinary Differential Equation Applications with R successfully applies computational techniques for solving real-worldODE problems that are found in a variety of fields, including chemistry, physics, biology,and physiology. The book provides readers with the necessary knowledge to reproduce andextend the comp

  7. Recent developments in fluorescence-based microscopy applied in biomedical sciences

    Institute of Scientific and Technical Information of China (English)

    2001-01-01

    The present short review aims to give an overview of the most recent de velopments in fluorescence microscopy and its applications in biomedical science s. Apart from improvements in well-established methods based on conventional fl u orescence microscopy and confocal microscopy (fluorescence in situ hybridisa tion (FISH), tyramide signal amplification (TSA) in immunocytochemistry, new fluorop hores), more recently introduced techniques like fluorescence resonance energy t ransfer (FRET), fluorescence recovery after photobleaching (FRAP), multiphoton m icroscopy and fluorescence correlation spectroscopy (FCS) will be discussed.

  8. Boundary-Work in the Health Research Field: Biomedical and Clinician Scientists' Perceptions of Social Science Research

    Science.gov (United States)

    Albert, Mathieu; Laberge, Suzanne; Hodges, Brian D.

    2009-01-01

    Funding agencies in Canada are attempting to break down the organizational boundaries between disciplines to promote interdisciplinary research and foster the integration of the social sciences into the health research field. This paper explores the extent to which biomedical and clinician scientists' perceptions of social science research operate…

  9. Predicting Transition and Adjustment to College: Biomedical and Behavioral Science Aspirants' and Minority Students' First Year of College

    Science.gov (United States)

    Hurtado, Sylvia; Han, June C.; Saenz, Victor B.; Espinosa, Lorelle L.; Cabrera, Nolan L.; Cerna, Oscar S.

    2007-01-01

    The purpose of this study is to explore key factors that impact the college transition of aspiring underrepresented minority students in the biomedical and behavioral sciences, in comparison with White, Asian students and non-science minority students. We examined successful management of the academic environment and sense of belonging during the…

  10. Should MD-PhD Programs Encourage Graduate Training in Disciplines Beyond Conventional Biomedical or Clinical Sciences?

    OpenAIRE

    O'Mara, Ryan J.; Hsu, Stephen I.; Wilson, Daniel R.

    2015-01-01

    The goal of MD–PhD training programs is to produce physician–scientists with unique capacities to lead the future biomedical research workforce. The current dearth of physician–scientists with expertise outside conventional biomedical or clinical sciences raises the question of whether MD–PhD training programs should allow or even encourage scholars to pursue doctoral studies in disciplines that are deemed nontraditional, yet are intrinsically germane to major influences on health. This quest...

  11. A THz heterodyne instrument for biomedical imaging applications

    Science.gov (United States)

    Siegel, Peter H.

    2004-01-01

    An ultra-wide-dynamic-range heterodyne imaging system operating at 2.5 THz is described. The instrument employs room temperature Schottky barrier diode mixers and far infrared gas laser sources developed for NASA space applications. A dynamic range of over 100dB at fixed intermediate frequencies has been realized. Amplitude/phase tracking circuitry results in stability of 0.02 dB and +-2 degrees of phase. The system is being employed to characterize biological (human and animal derived tissues) and a variety of materials of interest to NASA. This talk will describe the instrument and some of the early imaging experiments on everything from mouse tail to aerogel.

  12. Lecture 10: The European Bioinformatics Institute - "Big data" for biomedical sciences

    CERN Document Server

    CERN. Geneva; Dana, Jose

    2013-01-01

    Part 1: Big data for biomedical sciences (Tom Hancocks) Ten years ago witnessed the completion of the first international 'Big Biology' project that sequenced the human genome. In the years since biological sciences, have seen a vast growth in data. In the coming years advances will come from integration of experimental approaches and the translation into applied technologies is the hospital, clinic and even at home. This talk will examine the development of infrastructure, physical and virtual, that will allow millions of life scientists across Europe better access to biological data Tom studied Human Genetics at the University of Leeds and McMaster University, before completing an MSc in Analytical Genomics at the University of Birmingham. He has worked for the UK National Health Service in diagnostic genetics and in training healthcare scientists and clinicians in bioinformatics. Tom joined the EBI in 2012 and is responsible for the scientific development and delivery of training for the BioMedBridges pr...

  13. [The modern body image as ethical device for biomedical enhancement].

    Science.gov (United States)

    Breitsameter, C

    2013-01-01

    Ovid's "De medicamine faciei feminae" contains the astonishing sentence "Culta placent - all that is artificial is beautiful". In his "Éloge du maquillage" Baudelaire, buidling on Ovid's argument, states that first culture as picture and construction of beauty brings forth the truth of Nature and claims that cosmetics that allow errors of beauty to disappear artificially produce the true fulfillment of human nature. The present article looks into the historical roots of the body images that have emerged in modern times and attempts to derive structural devices for an ethical assessment of the potential we have to enhance human nature.

  14. Extended-Cavity Semiconductor Wavelength-Swept Laser for Biomedical Imaging

    OpenAIRE

    Yun, S. H.; Boudoux, C.; Pierce, M. C.; de Boer, J F; Tearney, G. J.; Bouma, B. E.

    2004-01-01

    We demonstrate a compact high-power rapidly swept wavelength tunable laser source based on a semiconductor optical amplifier and an extended-cavity grating filter. The laser produces excellent output characteristics for biomedical imaging, exhibiting >4-mW average output power, 80-dB noise extinction with its center wavelength swept over 100 nm at 1310 nm at variable repetition rates up to 500 Hz.

  15. Local mesh patterns versus local binary patterns: biomedical image indexing and retrieval.

    Science.gov (United States)

    Murala, Subrahmanyam; Wu, Q M Jonathan

    2014-05-01

    In this paper, a new image indexing and retrieval algorithm using local mesh patterns are proposed for biomedical image retrieval application. The standard local binary pattern encodes the relationship between the referenced pixel and its surrounding neighbors, whereas the proposed method encodes the relationship among the surrounding neighbors for a given referenced pixel in an image. The possible relationships among the surrounding neighbors are depending on the number of neighbors, P. In addition, the effectiveness of our algorithm is confirmed by combining it with the Gabor transform. To prove the effectiveness of our algorithm, three experiments have been carried out on three different biomedical image databases. Out of which two are meant for computer tomography (CT) and one for magnetic resonance (MR) image retrieval. It is further mentioned that the database considered for three experiments are OASIS-MRI database, NEMA-CT database, and VIA/I-ELCAP database which includes region of interest CT images. The results after being investigated show a significant improvement in terms of their evaluation measures as compared to LBP, LBP with Gabor transform, and other spatial and transform domain methods.

  16. Hegemony in the marketplace of biomedical innovation: consumer demand and stem cell science.

    Science.gov (United States)

    Salter, Brian; Zhou, Yinhua; Datta, Saheli

    2015-04-01

    The global political economy of stem cell therapies is characterised by an established biomedical hegemony of expertise, governance and values in collision with an increasingly informed health consumer demand able to define and pursue its own interest. How does the hegemony then deal with the challenge from the consumer market and what does this tell us about its modus operandi? In developing a theoretical framework to answer these questions, the paper begins with an analysis of the nature of the hegemony of biomedical innovation in general, its close relationship with the research funding market, the current political modes of consumer incorporation, and the ideological role performed by bioethics as legitimating agency. Secondly, taking the case of stem cell innovation, it explores the hegemonic challenge posed by consumer demand working through the global practice based market of medical innovation, the response of the national and international institutions of science and their reassertion of the values of the orthodox model, and the supporting contribution of bioethics. Finally, the paper addresses the tensions within the hegemonic model of stem cell innovation between the key roles and values of scientist and clinician, the exacerbation of these tensions by the increasingly visible demands of health consumers, and the emergence of political compromise.

  17. Biomedical laboratory science education: standardising teaching content in resource-limited countries

    Directory of Open Access Journals (Sweden)

    Wendy Arneson

    2013-03-01

    Full Text Available Background: There is a worldwide shortage of qualified laboratory personnel to provide adequate testing for the detection and monitoring of diseases. In an effort to increase laboratory capacity in developing countries, new skills have been introduced into laboratory services. Curriculum revision with a focus on good laboratory practice is an important aspect of supplying entry-level graduates with the competencies needed to meet the current needs.Objectives: Gaps in application and problem-solving competencies of newly graduated laboratory personnel were discovered in Ethiopia, Tanzania and Kenya. New medical laboratory teaching content was developed in Ethiopia, Tanzania and Kenya using national instructors, tutors, and experts and consulting medical laboratory educators from the United States of America (USA.Method: Workshops were held in Ethiopia to create standardised biomedical laboratory science (BMLS lessons based on recently-revised course objectives with an emphasis on application of skills. In Tanzania, course-module teaching guides with objectives were developed based on established competency outcomes and tasks. In Kenya, example interactive presentations and lesson plans were developed by the USA medical laboratory educators prior to the workshop to serve as resources and templates for the development of lessons within the country itself.Results: The new teaching materials were implemented and faculty, students and other stakeholders reported successful outcomes.Conclusions: These approaches to updating curricula may be helpful as biomedical laboratory schools in other countries address gaps in the competencies of entry-level graduates.

  18. Phase-preserving beam expander for biomedical X-ray imaging

    International Nuclear Information System (INIS)

    Building on previous work, a phase-preserving bent Laue beam-expanding monochromator was developed with the capability of performing live animal phase contrast dynamic imaging at the Biomedical Imaging and Therapy beamline at the Canadian Light Source. The BioMedical Imaging and Therapy beamlines at the Canadian Light Source are used by many researchers to capture phase-based imaging data. These experiments have so far been limited by the small vertical beam size, requiring vertical scanning of biological samples in order to image their full vertical extent. Previous work has been carried out to develop a bent Laue beam-expanding monochromator for use at these beamlines. However, the first attempts exhibited significant distortion in the diffraction plane, increasing the beam divergence and eliminating the usefulness of the monochromator for phase-related imaging techniques. Recent work has been carried out to more carefully match the polychromatic and geometric focal lengths in a so-called ‘magic condition’ that preserves the divergence of the beam and enables full-field phase-based imaging techniques. The new experimental parameters, namely asymmetry and Bragg angles, were evaluated by analysing knife-edge and in-line phase images to determine the effect on beam divergence in both vertical and horizontal directions, using the flat Bragg double-crystal monochromator at the beamline as a baseline. The results show that by using the magic condition, the difference between the two monochromator types is less than 10% in the diffraction plane. Phase fringes visible in test images of a biological sample demonstrate that this difference is small enough to enable in-line phase imaging, despite operating at a sub-optimal energy for the wafer and asymmetry angle that was used

  19. Phase-preserving beam expander for biomedical X-ray imaging

    Energy Technology Data Exchange (ETDEWEB)

    Martinson, Mercedes, E-mail: mercedes.m@usask.ca [University of Saskatchewan, 116 Science Place, Rm 163, Saskatoon, Saskatchewan (Canada); Samadi, Nazanin [University of Saskatchewan, 107 Wiggins Road, Saskatoon, Saskatchewan (Canada); Bassey, Bassey [University of Saskatchewan, 116 Science Place, Rm 163, Saskatoon, Saskatchewan (Canada); Gomez, Ariel [Canadian Light Source, 44 Innovation Boulevard, Saskatoon, Saskatchewan (Canada); Chapman, Dean [University of Saskatchewan, 107 Wiggins Road, Saskatoon, Saskatchewan (Canada); University of Saskatchewan, 116 Science Place, Rm 163, Saskatoon, Saskatchewan (Canada)

    2015-04-15

    Building on previous work, a phase-preserving bent Laue beam-expanding monochromator was developed with the capability of performing live animal phase contrast dynamic imaging at the Biomedical Imaging and Therapy beamline at the Canadian Light Source. The BioMedical Imaging and Therapy beamlines at the Canadian Light Source are used by many researchers to capture phase-based imaging data. These experiments have so far been limited by the small vertical beam size, requiring vertical scanning of biological samples in order to image their full vertical extent. Previous work has been carried out to develop a bent Laue beam-expanding monochromator for use at these beamlines. However, the first attempts exhibited significant distortion in the diffraction plane, increasing the beam divergence and eliminating the usefulness of the monochromator for phase-related imaging techniques. Recent work has been carried out to more carefully match the polychromatic and geometric focal lengths in a so-called ‘magic condition’ that preserves the divergence of the beam and enables full-field phase-based imaging techniques. The new experimental parameters, namely asymmetry and Bragg angles, were evaluated by analysing knife-edge and in-line phase images to determine the effect on beam divergence in both vertical and horizontal directions, using the flat Bragg double-crystal monochromator at the beamline as a baseline. The results show that by using the magic condition, the difference between the two monochromator types is less than 10% in the diffraction plane. Phase fringes visible in test images of a biological sample demonstrate that this difference is small enough to enable in-line phase imaging, despite operating at a sub-optimal energy for the wafer and asymmetry angle that was used.

  20. Biomedical neutron research at the Californium User Facility for neutron science

    International Nuclear Information System (INIS)

    The Californium User Facility for Neutron Science has been established at Oak Ridge National Laboratory (ORNL). The Californium User Facility (CUF) is a part of the larger Californium Facility, which fabricates and stores compact 252Cf neutron sources for worldwide distribution. The CUF can provide a cost-effective option for research with 252Cf sources. Three projects at the CUF that demonstrate the versatility of 252Cf for biological and biomedical neutron-based research are described: future establishment of a 252Cf-based neutron activation analysis system, ongoing work to produce miniature high-intensity, remotely afterloaded 252Cf sources for tumor therapy, and a recent experiment that irradiated living human lung cancer cells impregnated with experimental boron compounds to test their effectiveness for boron neutron capture therapy

  1. Biomedical neutron research at the Californium User Facility for neutron science

    Energy Technology Data Exchange (ETDEWEB)

    Martin, R.C. [Oak Ridge National Lab., TN (United States); Byrne, T.E. [Roane State Community College, Harriman, TN (United States); Miller, L.F. [Univ. of Tennessee, Knoxville, TN (United States)

    1997-04-01

    The Californium User Facility for Neutron Science has been established at Oak Ridge National Laboratory (ORNL). The Californium User Facility (CUF) is a part of the larger Californium Facility, which fabricates and stores compact {sup 252}Cf neutron sources for worldwide distribution. The CUF can provide a cost-effective option for research with {sup 252}Cf sources. Three projects at the CUF that demonstrate the versatility of {sup 252}Cf for biological and biomedical neutron-based research are described: future establishment of a {sup 252}Cf-based neutron activation analysis system, ongoing work to produce miniature high-intensity, remotely afterloaded {sup 252}Cf sources for tumor therapy, and a recent experiment that irradiated living human lung cancer cells impregnated with experimental boron compounds to test their effectiveness for boron neutron capture therapy.

  2. Advancement and applications of peptide phage display technology in biomedical science.

    Science.gov (United States)

    Wu, Chien-Hsun; Liu, I-Ju; Lu, Ruei-Min; Wu, Han-Chung

    2016-01-01

    Combinatorial phage library is a powerful research tool for high-throughput screening of protein interactions. Of all available molecular display techniques, phage display has proven to be the most popular approach. Screening phage-displayed random peptide libraries is an effective means of identifying peptides that can bind target molecules and regulate their function. Phage-displayed peptide libraries can be used for (i) B-cell and T-cell epitope mapping, (ii) selection of bioactive peptides bound to receptors or proteins, disease-specific antigen mimics, peptides bound to non-protein targets, cell-specific peptides, or organ-specific peptides, and (iii) development of peptide-mediated drug delivery systems and other applications. Targeting peptides identified using phage display technology may be useful for basic research and translational medicine. In this review article, we summarize the latest technological advancements in the application of phage-displayed peptide libraries to applied biomedical sciences.

  3. Exploring lecturers' views of first-year health science students' misconceptions in biomedical domains.

    Science.gov (United States)

    Badenhorst, Elmi; Mamede, Sílvia; Hartman, Nadia; Schmidt, Henk G

    2015-05-01

    Research has indicated that misconceptions hamper the process of knowledge construction. Misconceptions are defined as persistent ideas not supported by current scientific views. Few studies have explored how misconceptions develop when first year health students conceptually move between anatomy and physiology to construct coherent knowledge about the human body. This explorative study analysed lecturers' perceptions of first-year health science students' misconceptions in anatomy and physiology to gain a deeper understanding of how and why misconceptions could potentially arise, by attempting to link sources of misconceptions with four schools of thought, namely theories on concept formation, complexity, constructivism and conceptual change. This was a qualitative study where ten lecturers involved in teaching anatomy and physiology in the health science curricula at the University of Cape Town were interviewed to explore perceptions of students' misconceptions. Analytical induction was used to uncover categories within the interview data by using a coding system. A deeper analysis was done to identify emerging themes that begins to explore a theoretical understanding of why and how misconceptions arise. Nine sources of misconceptions were identified, including misconceptions related to language, perception, three dimensional thinking, causal reasoning, curricula design, learning styles and moving between macro and micro levels. The sources of misconceptions were then grouped together to assist educators with finding educational interventions to overcome potential misconceptions. This explorative study is an attempt in theory building to understand what is at the core of biomedical misconceptions. Misconceptions identified in this study hold implications for educators as not all students have the required building blocks and cognitive skills to successfully navigate their way through biomedical courses. Theoretical insight into the sources of misconceptions can

  4. Adventurism in biomedical science: Washington University-Monsanto program in biotechnology.

    Science.gov (United States)

    Gordon, J I

    1992-01-01

    The Washington University-Monsanto relationship has supported innovation in the biological sciences. It has done so in part by making the fence between an industrial and an academic institution more transparent and more easy to cross. A unique means of promoting intellectual adventurism may be lost, however, if this type of relationship is not structured to maximize the likelihood of obtaining products or if products are the only financial benefit that the industrial partner can derive from such interactions (for example other benefits could include governmental R&D tax credits for those relationships that satisfy some minimal criteria for size and/or length of commitment). I hope that this and other forms of industrial-university relationships that encourage discovery by providing institutional support for new ideas will flourish. Whatever their fate, the responsibility for promoting dreams must be shared by all of us: by those who are privileged to have students in their labs, by academic institutions as they seek to define their roles in the next century, by peer review boards, by national science policymakers, and perhaps by industry. I have presented the Washington University-Monsanto collaboration not as a complete answer to the question of how to promote intellectual adventurism in the biomedical sciences but rather as a concrete response to a problem that must be clearly articulated, thoroughly examined, and creatively addressed.

  5. Biomedical and environmental sciences programs at the Oak Ridge National Laboratory

    International Nuclear Information System (INIS)

    A major objective of the biomedical and environmental sciences (BES) research at the Oak Ridge National Laboratory (ORNL) is to provide information on environmental, health, and safety considerations that can be used in the formulation and implementation of energy technology decisions. Research is directed at securing information required for an understanding of both the short- and long-term consequences of the processes involved in new energy technologies. Investigation of the mechanisms responsible for biological and ecological damage caused by substances associated with energy production and of repair mechanisms is a necessary component of this research. The research is carried out by the staff of four divisions and one program: Biology Division, Environmental Sciences Division, Health and Safety Research Division, Information Division, and the Life Sciences Synthetic Fuels Program. Research programs underway in each of these divisions are discussed. Information on the following subjects is also included: interactions with universities; interactions with industry; technology transfer; recent accomplishments in the areas of program, publications, awards, and patents; and new initiatives

  6. Developmental programming: State-of-the-science and future directions-summary from a Pennington biomedical symposium

    Science.gov (United States)

    On December 8-9, 2014, the Pennington Biomedical Research Center convened a scientific symposium to review the state-of-the-science and future directions for the study of developmental programming of obesity and chronic disease. The objectives of the symposium were to discuss: (i) past and current s...

  7. Multiple choice questions are superior to extended matching questions to identify medicine and biomedical sciences students who perform poorly.

    NARCIS (Netherlands)

    Eijsvogels, T.M.H.; Brand, T.L. van den; Hopman, M.T.E.

    2013-01-01

    In recent years, medical faculties at Dutch universities have implemented a legally binding study advice to students of medicine and biomedical sciences during their propaedeutic phase. Appropriate examination is essential to discriminate between poor (grade <6), moderate (grade 6-8) and excellen

  8. Hot topics in biomedical ultrasound: ultrasound therapy and its integration with ultrasonic imaging

    Science.gov (United States)

    Everbach, E. Carr

    2005-09-01

    Since the development of biomedical ultrasound imaging from sonar after WWII, there has been a clear divide between ultrasonic imaging and ultrasound therapy. While imaging techniques are designed to cause as little change as possible in the tissues through which ultrasound propagates, ultrasound therapy typically relies upon heating or acoustic cavitation to produce a desirable therapeutic effect. Concerns over the increasingly high acoustic outputs of diagnostic ultrasound scanners prompted the adoption of the Mechanical Index (MI) and Thermal Index (TI) in the early 1990s. Therapeutic applications of ultrasound, meanwhile, have evolved from deep tissue heating in sports medicine to include targeted drug delivery, tumor and plaque ablation, cauterization via high intensity focused ultrasound (HIFU), and accelerated dissolution of blood clots. The integration of ultrasonic imaging and therapy in one device is just beginning, but the promise of improved patient outcomes is balanced by regulatory and practical impediments.

  9. Image science and image-quality research in the Optical Sciences Center

    Science.gov (United States)

    Barrett, Harrison H.; Myers, Kyle J.

    2014-09-01

    This paper reviews the history of research into imaging and image quality at the Optical Sciences Center (OSC), with emphasis on the period 1970-1990. The work of various students in the areas of psychophysical studies of human observers of images; mathematical model observers; image simulation and analysis, and the application of these methods to radiology and nuclear medicine is summarized. The rapid progress in computational power, at OSC and elsewhere, which enabled the steady advances in imaging and the emergence of a science of imaging, is also traced. The implications of these advances to ongoing research and the current Image Science curriculum at the College of Optical Sciences are discussed.

  10. Minimizing the semantic gap in biomedical content-based image retrieval

    Science.gov (United States)

    Guan, Haiying; Antani, Sameer; Long, L. Rodney; Thoma, George R.

    2010-03-01

    A major challenge in biomedical Content-Based Image Retrieval (CBIR) is to achieve meaningful mappings that minimize the semantic gap between the high-level biomedical semantic concepts and the low-level visual features in images. This paper presents a comprehensive learning-based scheme toward meeting this challenge and improving retrieval quality. The article presents two algorithms: a learning-based feature selection and fusion algorithm and the Ranking Support Vector Machine (Ranking SVM) algorithm. The feature selection algorithm aims to select 'good' features and fuse them using different similarity measurements to provide a better representation of the high-level concepts with the low-level image features. Ranking SVM is applied to learn the retrieval rank function and associate the selected low-level features with query concepts, given the ground-truth ranking of the training samples. The proposed scheme addresses four major issues in CBIR to improve the retrieval accuracy: image feature extraction, selection and fusion, similarity measurements, the association of the low-level features with high-level concepts, and the generation of the rank function to support high-level semantic image retrieval. It models the relationship between semantic concepts and image features, and enables retrieval at the semantic level. We apply it to the problem of vertebra shape retrieval from a digitized spine x-ray image set collected by the second National Health and Nutrition Examination Survey (NHANES II). The experimental results show an improvement of up to 41.92% in the mean average precision (MAP) over conventional image similarity computation methods.

  11. Synergies and distinctions between computational disciplines in biomedical research: perspective from the Clinical andTranslational Science Award programs.

    Science.gov (United States)

    Bernstam, Elmer V; Hersh, William R; Johnson, Stephen B; Chute, Christopher G; Nguyen, Hien; Sim, Ida; Nahm, Meredith; Weiner, Mark G; Miller, Perry; DiLaura, Robert P; Overcash, Marc; Lehmann, Harold P; Eichmann, David; Athey, Brian D; Scheuermann, Richard H; Anderson, Nick; Starren, Justin; Harris, Paul A; Smith, Jack W; Barbour, Ed; Silverstein, Jonathan C; Krusch, David A; Nagarajan, Rakesh; Becich, Michael J

    2009-07-01

    Clinical and translational research increasingly requires computation. Projects may involve multiple computationally oriented groups including information technology (IT) professionals, computer scientists, and biomedical informaticians. However, many biomedical researchers are not aware of the distinctions among these complementary groups, leading to confusion, delays, and suboptimal results. Although written from the perspective of Clinical and Translational Science Award (CTSA) programs within academic medical centers, this article addresses issues that extend beyond clinical and translational research. The authors describe the complementary but distinct roles of operational IT, research IT, computer science, and biomedical informatics using a clinical data warehouse as a running example. In general, IT professionals focus on technology. The authors distinguish between two types of IT groups within academic medical centers: central or administrative IT (supporting the administrative computing needs of large organizations) and research IT (supporting the computing needs of researchers). Computer scientists focus on general issues of computation such as designing faster computers or more efficient algorithms, rather than specific applications. In contrast, informaticians are concerned with data, information, and knowledge. Biomedical informaticians draw on a variety of tools, including but not limited to computers, to solve information problems in health care and biomedicine. The paper concludes with recommendations regarding administrative structures that can help to maximize the benefit of computation to biomedical research within academic health centers.

  12. Synergies and distinctions between computational disciplines in biomedical research: perspective from the Clinical andTranslational Science Award programs.

    Science.gov (United States)

    Bernstam, Elmer V; Hersh, William R; Johnson, Stephen B; Chute, Christopher G; Nguyen, Hien; Sim, Ida; Nahm, Meredith; Weiner, Mark G; Miller, Perry; DiLaura, Robert P; Overcash, Marc; Lehmann, Harold P; Eichmann, David; Athey, Brian D; Scheuermann, Richard H; Anderson, Nick; Starren, Justin; Harris, Paul A; Smith, Jack W; Barbour, Ed; Silverstein, Jonathan C; Krusch, David A; Nagarajan, Rakesh; Becich, Michael J

    2009-07-01

    Clinical and translational research increasingly requires computation. Projects may involve multiple computationally oriented groups including information technology (IT) professionals, computer scientists, and biomedical informaticians. However, many biomedical researchers are not aware of the distinctions among these complementary groups, leading to confusion, delays, and suboptimal results. Although written from the perspective of Clinical and Translational Science Award (CTSA) programs within academic medical centers, this article addresses issues that extend beyond clinical and translational research. The authors describe the complementary but distinct roles of operational IT, research IT, computer science, and biomedical informatics using a clinical data warehouse as a running example. In general, IT professionals focus on technology. The authors distinguish between two types of IT groups within academic medical centers: central or administrative IT (supporting the administrative computing needs of large organizations) and research IT (supporting the computing needs of researchers). Computer scientists focus on general issues of computation such as designing faster computers or more efficient algorithms, rather than specific applications. In contrast, informaticians are concerned with data, information, and knowledge. Biomedical informaticians draw on a variety of tools, including but not limited to computers, to solve information problems in health care and biomedicine. The paper concludes with recommendations regarding administrative structures that can help to maximize the benefit of computation to biomedical research within academic health centers. PMID:19550198

  13. Advanced computational approaches to biomedical engineering

    CERN Document Server

    Saha, Punam K; Basu, Subhadip

    2014-01-01

    There has been rapid growth in biomedical engineering in recent decades, given advancements in medical imaging and physiological modelling and sensing systems, coupled with immense growth in computational and network technology, analytic approaches, visualization and virtual-reality, man-machine interaction and automation. Biomedical engineering involves applying engineering principles to the medical and biological sciences and it comprises several topics including biomedicine, medical imaging, physiological modelling and sensing, instrumentation, real-time systems, automation and control, sig

  14. The role biomedical science laboratories can play in improving science knowledge and promoting first-year nursing academic success

    Science.gov (United States)

    Arneson, Pam

    The Role Biomedical Science Laboratories Can Play In Improving Science Knowledge and Promoting First-Year Nursing Academic Success The need for additional nursing and health care professionals is expected to increase dramatically over the next 20 years. With this in mind, students must have strong biomedical science knowledge to be competent in their field. Some studies have shown that participation in bioscience laboratories can enhance science knowledge. If this is true, an analysis of the role bioscience labs have in first-year nursing academic success is apposite. In response, this study sought to determine whether concurrent enrollment in anatomy and microbiology lecture and lab courses improved final lecture course grades. The investigation was expanded to include a comparison of first-year nursing GPA and prerequisite bioscience concurrent lecture/lab enrollment. Additionally, research has indicated that learning is affected by student perception of the course, instructor, content, and environment. To gain an insight regarding students' perspectives of laboratory courses, almost 100 students completed a 20-statement perception survey to understand how lab participation affects learning. Data analyses involved comparing anatomy and microbiology final lecture course grades between students who concurrently enrolled in the lecture and lab courses and students who completed the lecture course alone. Independent t test analyses revealed that there was no significant difference between the groups for anatomy, t(285) = .11, p = .912, but for microbiology, the lab course provided a significant educational benefit, t(256) = 4.47, p = .000. However, when concurrent prerequisite bioscience lecture/lab enrollment was compared to non-concurrent enrollment for first-year nursing GPA using independent t test analyses, no significant difference was found for South Dakota State University, t(37) = -1.57, p = .125, or for the University of South Dakota, t(38) = -0.46, p

  15. Creating a pipeline of talent for informatics: STEM initiative for high school students in computer science, biology, and biomedical informatics.

    Science.gov (United States)

    Dutta-Moscato, Joyeeta; Gopalakrishnan, Vanathi; Lotze, Michael T; Becich, Michael J

    2014-01-01

    This editorial provides insights into how informatics can attract highly trained students by involving them in science, technology, engineering, and math (STEM) training at the high school level and continuing to provide mentorship and research opportunities through the formative years of their education. Our central premise is that the trajectory necessary to be expert in the emergent fields in front of them requires acceleration at an early time point. Both pathology (and biomedical) informatics are new disciplines which would benefit from involvement by students at an early stage of their education. In 2009, Michael T Lotze MD, Kirsten Livesey (then a medical student, now a medical resident at University of Pittsburgh Medical Center (UPMC)), Richard Hersheberger, PhD (Currently, Dean at Roswell Park), and Megan Seippel, MS (the administrator) launched the University of Pittsburgh Cancer Institute (UPCI) Summer Academy to bring high school students for an 8 week summer academy focused on Cancer Biology. Initially, pathology and biomedical informatics were involved only in the classroom component of the UPCI Summer Academy. In 2011, due to popular interest, an informatics track called Computer Science, Biology and Biomedical Informatics (CoSBBI) was launched. CoSBBI currently acts as a feeder program for the undergraduate degree program in bioinformatics at the University of Pittsburgh, which is a joint degree offered by the Departments of Biology and Computer Science. We believe training in bioinformatics is the best foundation for students interested in future careers in pathology informatics or biomedical informatics. We describe our approach to the recruitment, training and research mentoring of high school students to create a pipeline of exceptionally well-trained applicants for both the disciplines of pathology informatics and biomedical informatics. We emphasize here how mentoring of high school students in pathology informatics and biomedical informatics

  16. Creating a pipeline of talent for informatics: STEM initiative for high school students in computer science, biology, and biomedical informatics.

    Science.gov (United States)

    Dutta-Moscato, Joyeeta; Gopalakrishnan, Vanathi; Lotze, Michael T; Becich, Michael J

    2014-01-01

    This editorial provides insights into how informatics can attract highly trained students by involving them in science, technology, engineering, and math (STEM) training at the high school level and continuing to provide mentorship and research opportunities through the formative years of their education. Our central premise is that the trajectory necessary to be expert in the emergent fields in front of them requires acceleration at an early time point. Both pathology (and biomedical) informatics are new disciplines which would benefit from involvement by students at an early stage of their education. In 2009, Michael T Lotze MD, Kirsten Livesey (then a medical student, now a medical resident at University of Pittsburgh Medical Center (UPMC)), Richard Hersheberger, PhD (Currently, Dean at Roswell Park), and Megan Seippel, MS (the administrator) launched the University of Pittsburgh Cancer Institute (UPCI) Summer Academy to bring high school students for an 8 week summer academy focused on Cancer Biology. Initially, pathology and biomedical informatics were involved only in the classroom component of the UPCI Summer Academy. In 2011, due to popular interest, an informatics track called Computer Science, Biology and Biomedical Informatics (CoSBBI) was launched. CoSBBI currently acts as a feeder program for the undergraduate degree program in bioinformatics at the University of Pittsburgh, which is a joint degree offered by the Departments of Biology and Computer Science. We believe training in bioinformatics is the best foundation for students interested in future careers in pathology informatics or biomedical informatics. We describe our approach to the recruitment, training and research mentoring of high school students to create a pipeline of exceptionally well-trained applicants for both the disciplines of pathology informatics and biomedical informatics. We emphasize here how mentoring of high school students in pathology informatics and biomedical informatics

  17. Creating a pipeline of talent for informatics: STEM initiative for high school students in computer science, biology, and biomedical informatics

    Directory of Open Access Journals (Sweden)

    Joyeeta Dutta-Moscato

    2014-01-01

    Full Text Available This editorial provides insights into how informatics can attract highly trained students by involving them in science, technology, engineering, and math (STEM training at the high school level and continuing to provide mentorship and research opportunities through the formative years of their education. Our central premise is that the trajectory necessary to be expert in the emergent fields in front of them requires acceleration at an early time point. Both pathology (and biomedical informatics are new disciplines which would benefit from involvement by students at an early stage of their education. In 2009, Michael T Lotze MD, Kirsten Livesey (then a medical student, now a medical resident at University of Pittsburgh Medical Center (UPMC, Richard Hersheberger, PhD (Currently, Dean at Roswell Park, and Megan Seippel, MS (the administrator launched the University of Pittsburgh Cancer Institute (UPCI Summer Academy to bring high school students for an 8 week summer academy focused on Cancer Biology. Initially, pathology and biomedical informatics were involved only in the classroom component of the UPCI Summer Academy. In 2011, due to popular interest, an informatics track called Computer Science, Biology and Biomedical Informatics (CoSBBI was launched. CoSBBI currently acts as a feeder program for the undergraduate degree program in bioinformatics at the University of Pittsburgh, which is a joint degree offered by the Departments of Biology and Computer Science. We believe training in bioinformatics is the best foundation for students interested in future careers in pathology informatics or biomedical informatics. We describe our approach to the recruitment, training and research mentoring of high school students to create a pipeline of exceptionally well-trained applicants for both the disciplines of pathology informatics and biomedical informatics. We emphasize here how mentoring of high school students in pathology informatics and biomedical

  18. An inventory of biomedical imaging physics elements-of-competence for diagnostic radiography education in Europe

    International Nuclear Information System (INIS)

    Purpose: To develop an inventory of biomedical physics elements-of-competence for diagnostic radiography education in Europe. Method: Research articles in the English literature and UK documentation pertinent to radiography education, competences and role development were subjected to a rigorous analysis of content from a functional and competence analysis perspective. Translations of radiography curricula from across Europe and relevant EU legislation were likewise analysed to ensure a pan-European perspective. Broad Subject Specific Competences for diagnostic radiography that included major biomedical physics components were singled out. These competences were in turn carefully deconstructed into specific elements-of-competence and those elements falling within the biomedical physics learning domain inventorised. A pilot version of the inventory was evaluated by participants during a meeting of the Higher Education Network for Radiography in Europe (HENRE), held in Marsascala, Malta, in November 2004. The inventory was further refined taking into consideration suggestions by HENRE members and scientific, professional and educational developments. Findings: The evaluation of the pilot inventory was very positive and indicated that the overall structure of the inventory was sensible, easily understood and acceptable - hence a good foundation for further development. Conclusions: Use of the inventory by radiography programme leaders and biomedical physics educators would guarantee that all necessary physics elements-of-competence underpinning the safe, effective and economical use of imaging devices are included within radiography curricula. It will also ensure the relevancy of physics content within radiography education. The inventory is designed to be a pragmatic tool for curriculum development across the entire range of radiography education up to doctorate level and irrespective of whether curriculum delivery is discipline-based or integrated, presentation

  19. Biomedical image and signal de-noising using dual tree complex wavelet transform

    Science.gov (United States)

    Rizi, F. Yousefi; Noubari, H. Ahmadi; Setarehdan, S. K.

    2011-10-01

    Dual tree complex wavelet transform(DTCWT) is a form of discrete wavelet transform, which generates complex coefficients by using a dual tree of wavelet filters to obtain their real and imaginary parts. The purposes of de-noising are reducing noise level and improving signal to noise ratio (SNR) without distorting the signal or image. This paper proposes a method for removing white Gaussian noise from ECG signals and biomedical images. The discrete wavelet transform (DWT) is very valuable in a large scope of de-noising problems. However, it has limitations such as oscillations of the coefficients at a singularity, lack of directional selectivity in higher dimensions, aliasing and consequent shift variance. The complex wavelet transform CWT strategy that we focus on in this paper is Kingsbury's and Selesnick's dual tree CWT (DTCWT) which outperforms the critically decimated DWT in a range of applications, such as de-noising. Each complex wavelet is oriented along one of six possible directions, and the magnitude of each complex wavelet has a smooth bell-shape. In the final part of this paper, we present biomedical image and signal de-noising by the means of thresholding magnitude of the wavelet coefficients.

  20. Phase-preserving beam expander for biomedical X-ray imaging.

    Science.gov (United States)

    Martinson, Mercedes; Samadi, Nazanin; Bassey, Bassey; Gomez, Ariel; Chapman, Dean

    2015-05-01

    The BioMedical Imaging and Therapy beamlines at the Canadian Light Source are used by many researchers to capture phase-based imaging data. These experiments have so far been limited by the small vertical beam size, requiring vertical scanning of biological samples in order to image their full vertical extent. Previous work has been carried out to develop a bent Laue beam-expanding monochromator for use at these beamlines. However, the first attempts exhibited significant distortion in the diffraction plane, increasing the beam divergence and eliminating the usefulness of the monochromator for phase-related imaging techniques. Recent work has been carried out to more carefully match the polychromatic and geometric focal lengths in a so-called `magic condition' that preserves the divergence of the beam and enables full-field phase-based imaging techniques. The new experimental parameters, namely asymmetry and Bragg angles, were evaluated by analysing knife-edge and in-line phase images to determine the effect on beam divergence in both vertical and horizontal directions, using the flat Bragg double-crystal monochromator at the beamline as a baseline. The results show that by using the magic condition, the difference between the two monochromator types is less than 10% in the diffraction plane. Phase fringes visible in test images of a biological sample demonstrate that this difference is small enough to enable in-line phase imaging, despite operating at a sub-optimal energy for the wafer and asymmetry angle that was used. PMID:25931100

  1. A bidimensional xenon-filled MWPC X-ray imaging detector for biomedical applications

    International Nuclear Information System (INIS)

    The X-ray imaging system developed at the Rutherford Laboratory for biomedical applications is described. It consists of a bidimensional, xenon-filled MWPC operating at NTP, and capable of detecting x-rays of energies up to approximately 50 keV. The chamber data is processed in a PDP-11 computer which is capable of storing and processing the x-ray images so as to provide good pictures of biological structures with a spatial resolution of approximately 2mm. Special attention has been paid to an application in the field of x-ray absorptiometry using monochromatic x-rays of approximately 42 keV and promising results are being obtained. Other potential applications are discussed. Particular attention is drawn to the usefulness of pulse height selection in improving the spatial resolution and imaging capability of an atmospheric pressure MWPC x-ray detector. (author)

  2. Programmatic Efforts at the National Institutes of Health to Promote and Support the Careers of Women in Biomedical Science.

    Science.gov (United States)

    Plank-Bazinet, Jennifer L; Bunker Whittington, Kjersten; Cassidy, Sara K B; Filart, Rosemarie; Cornelison, Terri L; Begg, Lisa; Austin Clayton, Janine

    2016-08-01

    Although women have reached parity at the training level in the biological sciences and medicine, they are still significantly underrepresented in the professoriate and in mid- and senior-level life science positions. Considerable effort has been devoted by individuals and organizations across science sectors to understanding this disparity and to developing interventions in support of women's career development. The National Institutes of Health (NIH) formed the Office of Research on Women's Health (ORWH) in 1990 with the goals of supporting initiatives to improve women's health and providing opportunities and support for the recruitment, retention, reentry, and sustained advancement of women in biomedical careers. Here, the authors review several accomplishments and flagship activities initiated by the NIH and ORWH in support of women's career development during this time. These include programming to support researchers returning to the workforce after a period away (Research Supplements to Promote Reentry into Biomedical and Behavioral Research Careers), career development awards made through the Building Interdisciplinary Research Careers in Women's Health program, and trans-NIH involvement and activities stemming from the NIH Working Group on Women in Biomedical Careers. These innovative programs have contributed to advancement of women by supporting the professional and personal needs of women in science. The authors discuss the unique opportunities that accompany NIH partnerships with the scientific community, and conclude with a summary of the impact of these programs on women in science. PMID:27191836

  3. Programmatic Efforts at the National Institutes of Health to Promote and Support the Careers of Women in Biomedical Science.

    Science.gov (United States)

    Plank-Bazinet, Jennifer L; Bunker Whittington, Kjersten; Cassidy, Sara K B; Filart, Rosemarie; Cornelison, Terri L; Begg, Lisa; Austin Clayton, Janine

    2016-08-01

    Although women have reached parity at the training level in the biological sciences and medicine, they are still significantly underrepresented in the professoriate and in mid- and senior-level life science positions. Considerable effort has been devoted by individuals and organizations across science sectors to understanding this disparity and to developing interventions in support of women's career development. The National Institutes of Health (NIH) formed the Office of Research on Women's Health (ORWH) in 1990 with the goals of supporting initiatives to improve women's health and providing opportunities and support for the recruitment, retention, reentry, and sustained advancement of women in biomedical careers. Here, the authors review several accomplishments and flagship activities initiated by the NIH and ORWH in support of women's career development during this time. These include programming to support researchers returning to the workforce after a period away (Research Supplements to Promote Reentry into Biomedical and Behavioral Research Careers), career development awards made through the Building Interdisciplinary Research Careers in Women's Health program, and trans-NIH involvement and activities stemming from the NIH Working Group on Women in Biomedical Careers. These innovative programs have contributed to advancement of women by supporting the professional and personal needs of women in science. The authors discuss the unique opportunities that accompany NIH partnerships with the scientific community, and conclude with a summary of the impact of these programs on women in science.

  4. Sodium-22-radiolabeled silica nanoparticles as new radiotracer for biomedical applications: in vivo positron emission tomography imaging, biodistribution, and biocompatibility

    Directory of Open Access Journals (Sweden)

    Al Faraj A

    2015-10-01

    Full Text Available Achraf Al Faraj,1 Basem Alotaibi,2 Abjal Pasha Shaik,3 Khaled Z Shamma,1 Ibrahim Al Jammaz,2 Jürgen Gerl4 1Molecular and Cellular Imaging Lab, Department of Radiological Sciences, College of Applied Medical Sciences, King Saud University, 2Cyclotron and Radiopharmaceutical Department, King Faisal Specialist Hospital and Research Centre, 3Department of Clinical Lab Sciences, College of Applied Medical Sciences, King Saud University, Riyadh, Saudi Arabia; 4GSI Helmholtzzentrum für Schwerionenforschung GmbH, Darmstadt, Germany Abstract: Despite their advantageous chemical properties for nuclear imaging, radioactive sodium-22 (22Na tracers have been excluded for biomedical applications because of their extremely long lifetime. In the current study, we proposed, for the first time, the use of 22Na radiotracers for pre-clinical applications by efficiently loading with silica nanoparticles (SiNPs and thus offering a new life for this radiotracer. Crown-ether-conjugated SiNPs (300 nm; -0.18±0.1 mV were successfully loaded with 22Na with a loading efficacy of 98.1%±1.4%. Noninvasive positron emission tomography imaging revealed a transient accumulation of 22Na-loaded SiNPs in the liver and to a lower extent in the spleen, kidneys, and lung. However, the signal gradually decreased in a time-dependent manner to become not detectable starting from 2 weeks postinjection. These observations were confirmed ex vivo by quantifying 22Na radioactivity using γ-counter and silicon content using inductively coupled plasma-mass spectrometry in the blood and the different organs of interest. Quantification of Si content in the urine and feces revealed that SiNPs accumulated in the organs were cleared from the body within a period of 2 weeks and completely in 1 month. Biocompatibility evaluations performed during the 1-month follow-up study to assess the possibility of synthesized nanocarriers to induce oxidative stress or DNA damage confirmed their safety for

  5. Classification of visual signs in abdominal CT image figures in biomedical literature

    Science.gov (United States)

    Xue, Zhiyun; You, Daekeun; Antani, Sameer; Long, L. Rodney; Demner-Fushman, Dina; Thoma, George R.

    2014-03-01

    "Imaging signs" are a critical part of radiology's language. They not only are important for conveying diagnosis, but may also aid in indexing radiology literature and retrieving relevant cases and images. Here we report our work towards representing and categorizing imaging signs of abdominal abnormalities in figures in the radiology literature. Given a region-of-interest (ROI) from a figure, our goal was to assign a correct imaging sign label to that ROI from the following seven: accordion, comb, ring, sandwich, small bowel feces, target, or whirl. As training and test data, we created our own "gold standard" dataset of regions containing imaging signs. We computed 2997 feature attributes to represent imaging sign characteristics for each ROI in training and test sets. Following feature selection they were reduced to 70 attributes and were input to a Support Vector Machine classifier. We applied image-enhancement methods to compensate for variable quality of the images in radiology articles. In particular we developed a method for automatic detection and removal of pointers/markers (arrows, arrowheads, and asterisk symbols) on the images. These pointers/markers are valuable for approximately locating ROIs; however, they degrade the classification because they are often (partially) included in the training ROIs. On a test set of 283 ROIs, our method achieved an overall accuracy of 70% in labeling the seven signs, which we believe is a promising result for using imaging signs to search/retrieve radiology literature. This work is also potentially valuable for the creation of a visual ontology of biomedical imaging entities.

  6. Should MD-PhD programs encourage graduate training in disciplines beyond conventional biomedical or clinical sciences?

    Science.gov (United States)

    O'Mara, Ryan J; Hsu, Stephen I; Wilson, Daniel R

    2015-02-01

    The goal of MD-PhD training programs is to produce physician-scientists with unique capacities to lead the future biomedical research workforce. The current dearth of physician-scientists with expertise outside conventional biomedical or clinical sciences raises the question of whether MD-PhD training programs should allow or even encourage scholars to pursue doctoral studies in disciplines that are deemed nontraditional, yet are intrinsically germane to major influences on health. This question is especially relevant because the central value and ultimate goal of the academic medicine community is to help attain the highest level of health and health equity for all people. Advances in medical science and practice, along with improvements in health care access and delivery, are steps toward health equity, but alone they will not come close to eliminating health inequalities. Addressing the complex health issues in our communities and society as a whole requires a biomedical research workforce with knowledge, practice, and research skills well beyond conventional biomedical or clinical sciences. To make real progress in advancing health equity, educational pathways must prepare physician-scientists to treat both micro and macro determinants of health. The authors argue that MD-PhD programs should allow and encourage their scholars to cross boundaries into less traditional disciplines such as epidemiology, statistics, anthropology, sociology, ethics, public policy, management, economics, education, social work, informatics, communications, and marketing. To fulfill current and coming health care needs, nontraditional MD-PhD students should be welcomed and supported as valuable members of our biomedical research workforce. PMID:25354071

  7. Should MD-PhD programs encourage graduate training in disciplines beyond conventional biomedical or clinical sciences?

    Science.gov (United States)

    O'Mara, Ryan J; Hsu, Stephen I; Wilson, Daniel R

    2015-02-01

    The goal of MD-PhD training programs is to produce physician-scientists with unique capacities to lead the future biomedical research workforce. The current dearth of physician-scientists with expertise outside conventional biomedical or clinical sciences raises the question of whether MD-PhD training programs should allow or even encourage scholars to pursue doctoral studies in disciplines that are deemed nontraditional, yet are intrinsically germane to major influences on health. This question is especially relevant because the central value and ultimate goal of the academic medicine community is to help attain the highest level of health and health equity for all people. Advances in medical science and practice, along with improvements in health care access and delivery, are steps toward health equity, but alone they will not come close to eliminating health inequalities. Addressing the complex health issues in our communities and society as a whole requires a biomedical research workforce with knowledge, practice, and research skills well beyond conventional biomedical or clinical sciences. To make real progress in advancing health equity, educational pathways must prepare physician-scientists to treat both micro and macro determinants of health. The authors argue that MD-PhD programs should allow and encourage their scholars to cross boundaries into less traditional disciplines such as epidemiology, statistics, anthropology, sociology, ethics, public policy, management, economics, education, social work, informatics, communications, and marketing. To fulfill current and coming health care needs, nontraditional MD-PhD students should be welcomed and supported as valuable members of our biomedical research workforce.

  8. Speckle noise reduction in ultrasound biomedical B-scan images using discrete topological derivative.

    Science.gov (United States)

    Damodaran, Nedumaran; Ramamurthy, Sivakumar; Velusamy, Sekar; Manickam, Gayathri Kanakaraj

    2012-02-01

    Over three decades, several despeckling techniques have been developed by researchers to reduce the speckle noise inherently present in ultrasound B-scan images without losing the diagnostic information. The topological derivative (TD) is the recently adopted technique in the area of biomedical image processing. In this work, we computed the topological derivative for an appropriate function associated to the ultrasound B-scan image gradient by assigning a diffusion factor k, which indicates the cost endowed to that particular image. In this article, a novel image denoising approach, called discrete topological derivative (DTD) has been implemented. The algorithm has been developed in MATLAB7.1 and tested over 200 ultrasound B-scan images of several organs such as the liver, kidney, gall bladder and pancreas. Further, the performance of the DTD algorithm has been estimated by calculating important performance metrics. A comparative study was carried out between the DTD and the traditional despeckling techniques. The calculated peak signal-to-noise ratio (PSNR) (the ratio between the maximum possible power of a signal and the power of corrupting noise that affects the fidelity of its representation) value of the DTD despeckled liver image is found to be 28 which is comparable with the outperformed speckle reducing anisotropic diffusion (SRAD) filter. SRAD filter is an edge-sensitive diffusion method for speckled images of ultrasonic and radar imaging applications. Canny edge detection and visual inspection of DTD filtered images by the trained radiologist found that the DTD algorithm preserves the hypoechoic and hyperechoic regions resulting in improved diagnosis as well as tissue characterization. PMID:22230135

  9. Comparative Analysis of Various Image Fusion Techniques For Biomedical Images: A Review

    Directory of Open Access Journals (Sweden)

    Nayera Nahvi,

    2014-05-01

    Full Text Available Image Fusion is a process of combining the relevant information from a set of images, into a single image, wherein the resultant fused image will be more informative and complete than any of the input images. This paper discusses implementation of DWT technique on different images to make a fused image having more information content. As DWT is the latest technique for image fusion as compared to simple image fusion and pyramid based image fusion, so we are going to implement DWT as the image fusion technique in our paper. Other methods such as Principal Component Analysis (PCA based fusion, Intensity hue Saturation (IHS Transform based fusion and high pass filtering methods are also discussed. A new algorithm is proposed using Discrete Wavelet transform and different fusion techniques including pixel averaging, min-max and max-min methods for medical image fusion. KEYWORDS:

  10. Neutron imaging in materials science

    Directory of Open Access Journals (Sweden)

    Nikolay Kardjilov

    2011-06-01

    Full Text Available Neutron imaging is a non-destructive technique that can reveal the interior of many materials and engineering components and also probe magnetic fields. Within the past few years, several new imaging modes have been introduced that extend the scope of neutron imaging beyond conventional neutron attenuation imaging, yielding both 2- and 3D information about properties and phenomena inaccessible until now. We present an overview of the most important advances in the application of neutron imaging in materials research with a focus on novel techniques such as energy-selective imaging, interferometric imaging with phase gratings, and polarized-neutron imaging. Examples given include the investigation of fluid dynamics in fuel cells, materials phases and structural heterogeneities, distribution of strains, and magnetic structures or phase transitions.

  11. Neutron imaging in materials science

    OpenAIRE

    Nikolay Kardjilov; Ingo Manke; André Hilger; Markus Strobl; John Banhart

    2011-01-01

    Neutron imaging is a non-destructive technique that can reveal the interior of many materials and engineering components and also probe magnetic fields. Within the past few years, several new imaging modes have been introduced that extend the scope of neutron imaging beyond conventional neutron attenuation imaging, yielding both 2- and 3D information about properties and phenomena inaccessible until now. We present an overview of the most important advances in the application of neutron imagi...

  12. An Overview of SBIR Phase 2 Physical Sciences and Biomedical Technologies in Space

    Science.gov (United States)

    Nguyen, Hung D.; Steele, Gynelle C.

    2015-01-01

    Technological innovation is the overall focus of NASA's Small Business Innovation Research (SBIR) program. The program invests in the development of innovative concepts and technologies to help NASA's mission directorates address critical research and development needs for agency projects. This report highlights innovative SBIR Phase II projects from 2007-2012 specifically addressing areas in physical sciences and biomedical technologies in space, which is one of six core competencies at NASA Glenn Research Center. There are twenty two technologies featured with emphasis on a wide spectrum of applications such as reusable handheld electrolyte, sensor for bone markers, wideband single crystal transducer, mini treadmill for musculoskeletal, and much more. Each article in this report describes an innovation, technical objective, and highlights NASA commercial and industrial applications. This report serves as an opportunity for NASA personnel including engineers, researchers, and program managers to learn of NASA SBIR's capabilities that might be crosscutting into this technology area. As the result, it would cause collaborations and partnerships between the small companies and NASA Programs and Projects resulting in benefit to both SBIR companies and NASA.

  13. Biomedical Applications of the Information-efficient Spectral Imaging Sensor (ISIS)

    Energy Technology Data Exchange (ETDEWEB)

    Gentry, S.M.; Levenson, R.

    1999-01-21

    The Information-efficient Spectral Imaging Sensor (ISIS) approach to spectral imaging seeks to bridge the gap between tuned multispectral and fixed hyperspectral imaging sensors. By allowing the definition of completely general spectral filter functions, truly optimal measurements can be made for a given task. These optimal measurements significantly improve signal-to-noise ratio (SNR) and speed, minimize data volume and data rate, while preserving classification accuracy. The following paper investigates the application of the ISIS sensing approach in two sample biomedical applications: prostate and colon cancer screening. It is shown that in these applications, two to three optimal measurements are sufficient to capture the majority of classification information for critical sample constituents. In the prostate cancer example, the optimal measurements allow 8% relative improvement in classification accuracy of critical cell constituents over a red, green, blue (RGB) sensor. In the colon cancer example, use of optimal measurements boost the classification accuracy of critical cell constituents by 28% relative to the RGB sensor. In both cases, optimal measurements match the performance achieved by the entire hyperspectral data set. The paper concludes that an ISIS style spectral imager can acquire these optimal spectral images directly, allowing improved classification accuracy over an RGB sensor. Compared to a hyperspectral sensor, the ISIS approach can achieve similar classification accuracy using a significantly lower number of spectral samples, thus minimizing overall sample classification time and cost.

  14. Pacific Northwest Laboratory annual report for 1994 to the DOE Office of Energy Research Part 1: Biomedical sciences

    Energy Technology Data Exchange (ETDEWEB)

    Park, J.F.

    1995-04-01

    Research in the biomedical sciences at PNL is described. Activities reported include: inhaled plutonium in dogs; national radiobiology archives; statistical analysis of data from animal studies; genotoxicity of inhaled energy effluents; molecular events during tumor initiation; biochemistry of free radical induced DNA damage; radon hazards in homes; mechanisms of radon injury; genetics of radon induced lung cancer; and in vivo/in vitro radon induced cellular damage.

  15. Development of Biomedical Polymer-Silicate Nanocomposites: A Materials Science Perspective

    Directory of Open Access Journals (Sweden)

    Chia-Jung Wu

    2010-04-01

    Full Text Available Biomedical polymer-silicate nanocomposites have potential to become critically important to the development of biomedical applications, ranging from diagnostic and therapeutic devices, tissue regeneration and drug delivery matrixes to various bio-technologies that are inspired by biology but have only indirect biomedical relation. The fundamental understanding of polymer-nanoparticle interactions is absolutely necessary to control structure-property relationships of materials that need to work within the chemical, physical and biological constraints required by an application. This review summarizes the most recent published strategies to design and develop polymer-silicate nanocomposites (including clay based silicate nanoparticles and bioactive glass nanoparticles for a variety of biomedical applications. Emerging trends in bio-technological and biomedical nanocomposites are highlighted and potential new fields of applications are examined.

  16. Proceedings of the 1. National Forum of Science and Technology on Health; 13. Brazilian Congress on Biomedical Engineering; 4. Brazilian Congress of Physicists on Medicine; Brazilian Meeting on Biology and Nuclear Medicine; Brazilian Meeting on Radiological Protection

    International Nuclear Information System (INIS)

    This 1. National Forum of Science and Technology on Health presents works of several scientific institutions, including topics on bioengineering; modelling and simulation; sensors and transducers; ultrasonic on medicine; instrumentation processing of signs and medical images; biomedical informatics and clinical software; engineering of rehabilitation; bio-materials and bio-mechanical; clinical engineering; in vivo and in vitro nuclear medicine; radioisotope production and utilization; radiology; radiology protection and dosimetry; radiotherapy; evaluation of technology on health and education. (C.G.C.)

  17. Biomedical Engineering

    CERN Document Server

    Suh, Sang C; Tanik, Murat M

    2011-01-01

    Biomedical Engineering: Health Care Systems, Technology and Techniques is an edited volume with contributions from world experts. It provides readers with unique contributions related to current research and future healthcare systems. Practitioners and researchers focused on computer science, bioinformatics, engineering and medicine will find this book a valuable reference.

  18. How can we improve Science, Technology, Engineering, and Math education to encourage careers in Biomedical and Pathology Informatics?

    Directory of Open Access Journals (Sweden)

    Rahul Uppal

    2016-01-01

    Full Text Available The Computer Science, Biology, and Biomedical Informatics (CoSBBI program was initiated in 2011 to expose the critical role of informatics in biomedicine to talented high school students.[1] By involving them in Science, Technology, Engineering, and Math (STEM training at the high school level and providing mentorship and research opportunities throughout the formative years of their education, CoSBBI creates a research infrastructure designed to develop young informaticians. Our central premise is that the trajectory necessary to be an expert in the emerging fields of biomedical informatics and pathology informatics requires accelerated learning at an early age.In our 4th year of CoSBBI as a part of the University of Pittsburgh Cancer Institute (UPCI Academy (http://www.upci.upmc.edu/summeracademy/, and our 2nd year of CoSBBI as an independent informatics-based academy, we enhanced our classroom curriculum, added hands-on computer science instruction, and expanded research projects to include clinical informatics. We also conducted a qualitative evaluation of the program to identify areas that need improvement in order to achieve our goal of creating a pipeline of exceptionally well-trained applicants for both the disciplines of pathology informatics and biomedical informatics in the era of big data and personalized medicine.

  19. How can we improve Science, Technology, Engineering, and Math education to encourage careers in Biomedical and Pathology Informatics?

    Science.gov (United States)

    Uppal, Rahul; Mandava, Gunasheil; Romagnoli, Katrina M; King, Andrew J; Draper, Amie J; Handen, Adam L; Fisher, Arielle M; Becich, Michael J; Dutta-Moscato, Joyeeta

    2016-01-01

    The Computer Science, Biology, and Biomedical Informatics (CoSBBI) program was initiated in 2011 to expose the critical role of informatics in biomedicine to talented high school students.[1] By involving them in Science, Technology, Engineering, and Math (STEM) training at the high school level and providing mentorship and research opportunities throughout the formative years of their education, CoSBBI creates a research infrastructure designed to develop young informaticians. Our central premise is that the trajectory necessary to be an expert in the emerging fields of biomedical informatics and pathology informatics requires accelerated learning at an early age.In our 4(th) year of CoSBBI as a part of the University of Pittsburgh Cancer Institute (UPCI) Academy (http://www.upci.upmc.edu/summeracademy/), and our 2nd year of CoSBBI as an independent informatics-based academy, we enhanced our classroom curriculum, added hands-on computer science instruction, and expanded research projects to include clinical informatics. We also conducted a qualitative evaluation of the program to identify areas that need improvement in order to achieve our goal of creating a pipeline of exceptionally well-trained applicants for both the disciplines of pathology informatics and biomedical informatics in the era of big data and personalized medicine.

  20. How can we improve Science, Technology, Engineering, and Math education to encourage careers in Biomedical and Pathology Informatics?

    Science.gov (United States)

    Uppal, Rahul; Mandava, Gunasheil; Romagnoli, Katrina M; King, Andrew J; Draper, Amie J; Handen, Adam L; Fisher, Arielle M; Becich, Michael J; Dutta-Moscato, Joyeeta

    2016-01-01

    The Computer Science, Biology, and Biomedical Informatics (CoSBBI) program was initiated in 2011 to expose the critical role of informatics in biomedicine to talented high school students.[1] By involving them in Science, Technology, Engineering, and Math (STEM) training at the high school level and providing mentorship and research opportunities throughout the formative years of their education, CoSBBI creates a research infrastructure designed to develop young informaticians. Our central premise is that the trajectory necessary to be an expert in the emerging fields of biomedical informatics and pathology informatics requires accelerated learning at an early age.In our 4(th) year of CoSBBI as a part of the University of Pittsburgh Cancer Institute (UPCI) Academy (http://www.upci.upmc.edu/summeracademy/), and our 2nd year of CoSBBI as an independent informatics-based academy, we enhanced our classroom curriculum, added hands-on computer science instruction, and expanded research projects to include clinical informatics. We also conducted a qualitative evaluation of the program to identify areas that need improvement in order to achieve our goal of creating a pipeline of exceptionally well-trained applicants for both the disciplines of pathology informatics and biomedical informatics in the era of big data and personalized medicine. PMID:26955500

  1. Information sources in biomedical science and medical journalism: methodological approaches and assessment.

    Science.gov (United States)

    Miranda, Giovanna F; Vercellesi, Luisa; Bruno, Flavia

    2004-09-01

    Throughout the world the public is showing increasing interest in medical and scientific subjects and journalists largely spread this information, with an important impact on knowledge and health. Clearly, therefore, the relationship between the journalist and his sources is delicate: freedom and independence of information depend on the independence and truthfulness of the sources. The new "precision journalism" holds that scientific methods should be applied to journalism, so authoritative sources are a common need for journalists and scientists. We therefore compared the individual classifications and methods of assessing of sources in biomedical science and medical journalism to try to extrapolate scientific methods of evaluation to journalism. In journalism and science terms used to classify sources of information show some similarities, but their meanings are different. In science primary and secondary classes of information, for instance, refer to the levels of processing, but in journalism to the official nature of the source itself. Scientists and journalists must both always consult as many sources as possible and check their authoritativeness, reliability, completeness, up-to-dateness and balance. In journalism, however, there are some important differences and limits: too many sources can sometimes diminish the quality of the information. The sources serve a first filter between the event and the journalist, who is not providing the reader with the fact, but with its projection. Journalists have time constraints and lack the objective criteria for searching, the specific background knowledge, and the expertise to fully assess sources. To assist in understanding the wealth of sources of information in journalism, we have prepared a checklist of items and questions. There are at least four fundamental points that a good journalist, like any scientist, should know: how to find the latest information (the sources), how to assess it (the quality and

  2. Using Biomedically Relevant Multimedia Content in an Introductory Physics Course for Life Science and Pre-health Students

    Science.gov (United States)

    Mylott, Elliot; Kutschera, Ellynne; Dunlap, Justin C.; Christensen, Warren; Widenhorn, Ralf

    2016-04-01

    We will describe a one-quarter pilot algebra-based introductory physics course for pre-health and life science majors. The course features videos with biomedical experts and cogent biomedically inspired physics content. The materials were used in a flipped classroom as well as an all-online environment where students interacted with multimedia materials online and prior to engaging in classroom activities. Pre-lecture questions on both the medical content covered in the video media and the physics concepts in the written material were designed to engage students and probe their understanding of physics. The course featured group discussion and peer-lead instruction. Following in-class instruction, students engaged with homework assignments which explore the connections of physics and the medical field in a quantitative manner. Course surveys showed a positive response by the vast majority of students. Students largely indicated that the course helped them to make a connection between physics and the biomedical field. The biomedical focus and different course format were seen as an improvement to previous traditional physics instruction.

  3. Handbook of Coherent-Domain Optical Methods Biomedical Diagnostics, Environmental Monitoring, and Materials Science

    CERN Document Server

    2013-01-01

    This Handbook provides comprehensive coverage of laser and coherent-domain methods as applied to biomedicine, environmental monitoring, and materials science. Worldwide leaders in these fields describe the fundamentals of light interaction with random media and present an overview of basic research. The latest results on coherent and polarization properties of light scattered by random media, including tissues and blood, speckles formation in multiple scattering media, and other non-destructive interactions of coherent light with rough surfaces and tissues, allow the reader to understand the principles and applications of coherent diagnostic techniques. The expanded second edition has been thoroughly updated with particular emphasis on novel coherent-domain techniques and their applications in medicine and environmental science. Volume 1 describes state-of-the-art methods of coherent and polarization optical imaging, tomography and spectroscopy; diffusion wave spectroscopy; elastic, quasi-elastic and inelasti...

  4. Performance of a novel wafer scale CMOS active pixel sensor for bio-medical imaging.

    Science.gov (United States)

    Esposito, M; Anaxagoras, T; Konstantinidis, A C; Zheng, Y; Speller, R D; Evans, P M; Allinson, N M; Wells, K

    2014-07-01

    Recently CMOS active pixels sensors (APSs) have become a valuable alternative to amorphous silicon and selenium flat panel imagers (FPIs) in bio-medical imaging applications. CMOS APSs can now be scaled up to the standard 20 cm diameter wafer size by means of a reticle stitching block process. However, despite wafer scale CMOS APS being monolithic, sources of non-uniformity of response and regional variations can persist representing a significant challenge for wafer scale sensor response. Non-uniformity of stitched sensors can arise from a number of factors related to the manufacturing process, including variation of amplification, variation between readout components, wafer defects and process variations across the wafer due to manufacturing processes. This paper reports on an investigation into the spatial non-uniformity and regional variations of a wafer scale stitched CMOS APS. For the first time a per-pixel analysis of the electro-optical performance of a wafer CMOS APS is presented, to address inhomogeneity issues arising from the stitching techniques used to manufacture wafer scale sensors. A complete model of the signal generation in the pixel array has been provided and proved capable of accounting for noise and gain variations across the pixel array. This novel analysis leads to readout noise and conversion gain being evaluated at pixel level, stitching block level and in regions of interest, resulting in a coefficient of variation ⩽1.9%. The uniformity of the image quality performance has been further investigated in a typical x-ray application, i.e. mammography, showing a uniformity in terms of CNR among the highest when compared with mammography detectors commonly used in clinical practice. Finally, in order to compare the detection capability of this novel APS with the technology currently used (i.e. FPIs), theoretical evaluation of the detection quantum efficiency (DQE) at zero-frequency has been performed, resulting in a higher DQE for this

  5. Examination of the variation of the optical diffusion properties in nanophosphor materials for use in biomedical imaging and instrumentation

    Science.gov (United States)

    Liaparinos, P.; Kandarakis, I.

    2015-06-01

    Granular phosphors are commonly used in several applications in biomedical imaging and instrumentation. The structural and optical properties of phosphor materials affect the optical signal transferred out and play a critical role in the quality of the final signal or image. In recent years, following developments in materials science and technology, several new methods have been successfully implemented for the preparation of nanosized phosphors. It is of interest to investigate whether nanophosphors could replace existing micro phosphors for next generation high-performance displays and imaging devices. The purpose of the present study was to investigate the variation of the optical parameters (e.g. light extinction coefficient mext, probability of light absorption p, light anisotropy factor g) in the sub-micron and nano scale under the variability of light wavelength (400-700 nm) and refractive index (e.g., two limiting values were used 1.4 and 2.0). For the case of low refractive index (1.4), by increasing the grain diameter: (a) the light extinction increases, (b) the light absorption probability decreases and (c) the anisotropy factor increases in the whole range or gran sizes (2-1000 nm). However, for the high value of the refractive index (2.0), the light extinction coefficient was found to increase up to a maximum for grain diameter: (a) 200 nm (at 400 nm light wavelength) and (b) 600 nm (at 700 nm light wavelength). Finally, at 400 nm grain diameter, the probability of light absorption was found to decrease down to a minimum while the anisotropy factor was found to increase up to maximum for all light wavelengths considered.

  6. Hessian-based norm regularization for image restoration with biomedical applications.

    Science.gov (United States)

    Lefkimmiatis, Stamatios; Bourquard, Aurélien; Unser, Michael

    2012-03-01

    We present nonquadratic Hessian-based regularization methods that can be effectively used for image restoration problems in a variational framework. Motivated by the great success of the total-variation (TV) functional, we extend it to also include second-order differential operators. Specifically, we derive second-order regularizers that involve matrix norms of the Hessian operator. The definition of these functionals is based on an alternative interpretation of TV that relies on mixed norms of directional derivatives. We show that the resulting regularizers retain some of the most favorable properties of TV, i.e., convexity, homogeneity, rotation, and translation invariance, while dealing effectively with the staircase effect. We further develop an efficient minimization scheme for the corresponding objective functions. The proposed algorithm is of the iteratively reweighted least-square type and results from a majorization-minimization approach. It relies on a problem-specific preconditioned conjugate gradient method, which makes the overall minimization scheme very attractive since it can be applied effectively to large images in a reasonable computational time. We validate the overall proposed regularization framework through deblurring experiments under additive Gaussian noise on standard and biomedical images.

  7. Material Science and Engineering with Neutron Imaging

    Science.gov (United States)

    Penumadu, D.

    This chapter summarizes some of the results related to the use of neutron imaging (radiography and tomography) as applied to the broad area of materials science and engineering research. These include multi-phase flow visualization in metal casting techniques, energy-selective imaging of materials and its use for texture and stress imaging in polycrystalline materials, characterization of discrete particle systems, flow through porous media, and stroboscopic imaging. The importance of spatial resolution and neutron detector type for given engineering applications is also addressed.

  8. LIF and fast imaging plasma jet characterization relevant for NTP biomedical applications

    International Nuclear Information System (INIS)

    In the field of biomedical application, many publications report on non-thermal plasma jet potentialities for cell behaviour modifications in cancer treatment, wound healing or sterilization. However most previous plasma jet characterizations were performed when jets expend freely in air. Only recently has the influence of the targeted surface been properly considered. In this work, modifications induced by various types of targets, mimicking the biological samples, in the plasma propagation and production of hydroxyl radicals are evidenced through time-resolved intensified charge-coupled device imaging and laser-induced fluorescence (LIF) measurements. A LIF model, also specifically dedicated to estimate air and water penetration inside the jet, is used and proves to be well adapted to characterize the plasma jet under biomedical application conditions. It is shown that the plasma produced by the plasma gun counter-propagates after impinging the surface which, for the same operating parameters, leads to an increase of almost one order of magnitude in the maximum OH density (from ∼2 × 1013 cm−3 for open-air propagation to ∼1 × 1014 cm−3 for a grounded metal target). The nature of the target, especially its electrical conductivity, as well as gas flow rate and voltage amplitude are playing a key role in the production of hydroxyl radicals. The strong interplay between gas flow dynamics and plasma propagation is here confirmed by air and water distribution measurements. The need for a multi-diagnostic approach, as well as great care in setting up the in situ characterization of plasma jets, is here emphasized. Special attention must not only be paid to voltage amplitude and gas flow rate but also to the nature, humidity and conductivity of the target. (paper)

  9. LIF and fast imaging plasma jet characterization relevant for NTP biomedical applications

    Science.gov (United States)

    Riès, D.; Dilecce, G.; Robert, E.; Ambrico, P. F.; Dozias, S.; Pouvesle, J.-M.

    2014-07-01

    In the field of biomedical application, many publications report on non-thermal plasma jet potentialities for cell behaviour modifications in cancer treatment, wound healing or sterilization. However most previous plasma jet characterizations were performed when jets expend freely in air. Only recently has the influence of the targeted surface been properly considered. In this work, modifications induced by various types of targets, mimicking the biological samples, in the plasma propagation and production of hydroxyl radicals are evidenced through time-resolved intensified charge-coupled device imaging and laser-induced fluorescence (LIF) measurements. A LIF model, also specifically dedicated to estimate air and water penetration inside the jet, is used and proves to be well adapted to characterize the plasma jet under biomedical application conditions. It is shown that the plasma produced by the plasma gun counter-propagates after impinging the surface which, for the same operating parameters, leads to an increase of almost one order of magnitude in the maximum OH density (from ˜2 × 1013 cm-3 for open-air propagation to ˜1 × 1014 cm-3 for a grounded metal target). The nature of the target, especially its electrical conductivity, as well as gas flow rate and voltage amplitude are playing a key role in the production of hydroxyl radicals. The strong interplay between gas flow dynamics and plasma propagation is here confirmed by air and water distribution measurements. The need for a multi-diagnostic approach, as well as great care in setting up the in situ characterization of plasma jets, is here emphasized. Special attention must not only be paid to voltage amplitude and gas flow rate but also to the nature, humidity and conductivity of the target.

  10. Beamlines of the biomedical imaging and therapy facility at the Canadian light source – part 3

    Energy Technology Data Exchange (ETDEWEB)

    Wysokinski, Tomasz W., E-mail: bmit@lightsource.ca [Canadian Light Source, Saskatoon, SK (Canada); Chapman, Dean [Anatomy and Cell Biology, University of Saskatchewan, Saskatoon, SK (Canada); Adams, Gregg [Western College of Veterinary Medicine, Saskatoon, SK (Canada); Renier, Michel [European Synchrotron Radiation Facility, Grenoble (France); Suortti, Pekka [Department of Physics, University of Helsinki (Finland); Thomlinson, William [Department of Physics, University of Saskatchewan, Saskatoon, SK (Canada)

    2015-03-01

    The BioMedical Imaging and Therapy (BMIT) facility provides synchrotron-specific imaging and radiation therapy capabilities [1–4]. We describe here the Insertion Device (ID) beamline 05ID-2 with the beam terminated in the SOE-1 (Secondary Optical Enclosure) experimental hutch. This endstation is designed for imaging and therapy research primarily in animals ranging in size from mice to humans to horses, as well as tissue specimens including plants. Core research programs include human and animal reproduction, cancer imaging and therapy, spinal cord injury and repair, cardiovascular and lung imaging and disease, bone and cartilage growth and deterioration, mammography, developmental biology, gene expression research as well as the introduction of new imaging methods. The source for the ID beamline is a multi-pole superconducting 4.3 T wiggler [5]. The high field gives a critical energy over 20 keV. The high critical energy presents shielding challenges and great care must be taken to assess shielding requirements [6–9]. The optics in the POE-1 and POE-3 hutches [4,10] prepare a monochromatic beam that is 22 cm wide in the last experimental hutch SOE-1. The double crystal bent-Laue or Bragg monochromator, or the single-crystal K-edge subtraction (KES) monochromator provide an energy range appropriate for imaging studies in animals (20–100+ keV). SOE-1 (excluding the basement structure 4 m below the experimental floor) is 6 m wide, 5 m tall and 10 m long with a removable back wall to accommodate installation and removal of the Large Animal Positioning System (LAPS) capable of positioning and manipulating animals as large as a horse [11]. This end-station also includes a unique detector positioner with a vertical travel range of 4.9 m which is required for the KES imaging angle range of +12.3° to –7.3°. The detector positioner also includes moveable shielding integrated with the safety shutters. An update on the status of the other two end-stations at BMIT

  11. Beamlines of the biomedical imaging and therapy facility at the Canadian light source – part 3

    International Nuclear Information System (INIS)

    The BioMedical Imaging and Therapy (BMIT) facility provides synchrotron-specific imaging and radiation therapy capabilities [1–4]. We describe here the Insertion Device (ID) beamline 05ID-2 with the beam terminated in the SOE-1 (Secondary Optical Enclosure) experimental hutch. This endstation is designed for imaging and therapy research primarily in animals ranging in size from mice to humans to horses, as well as tissue specimens including plants. Core research programs include human and animal reproduction, cancer imaging and therapy, spinal cord injury and repair, cardiovascular and lung imaging and disease, bone and cartilage growth and deterioration, mammography, developmental biology, gene expression research as well as the introduction of new imaging methods. The source for the ID beamline is a multi-pole superconducting 4.3 T wiggler [5]. The high field gives a critical energy over 20 keV. The high critical energy presents shielding challenges and great care must be taken to assess shielding requirements [6–9]. The optics in the POE-1 and POE-3 hutches [4,10] prepare a monochromatic beam that is 22 cm wide in the last experimental hutch SOE-1. The double crystal bent-Laue or Bragg monochromator, or the single-crystal K-edge subtraction (KES) monochromator provide an energy range appropriate for imaging studies in animals (20–100+ keV). SOE-1 (excluding the basement structure 4 m below the experimental floor) is 6 m wide, 5 m tall and 10 m long with a removable back wall to accommodate installation and removal of the Large Animal Positioning System (LAPS) capable of positioning and manipulating animals as large as a horse [11]. This end-station also includes a unique detector positioner with a vertical travel range of 4.9 m which is required for the KES imaging angle range of +12.3° to –7.3°. The detector positioner also includes moveable shielding integrated with the safety shutters. An update on the status of the other two end-stations at BMIT

  12. Applications of thermal imaging in avian science

    OpenAIRE

    McCafferty, D. J.

    2013-01-01

    Thermal imaging, or infrared thermography, has been used in avian science since the 1960s. More than 30 species of birds, ranging in size from passerines to ratites, have been studied using this technology. The main strength of this technique is that it is a non-invasive and non-contact method of measuring surface temperature. Its limitations and measurement errors are well understood and suitable protocols have been developed for a variety of experimental settings. Thermal imaging has been u...

  13. Images of time mind, science, reality

    CERN Document Server

    Jaroszkiewicz, George

    2016-01-01

    Have you ever wondered about Time: what it is or how to discuss it? If you have, then you may have been bewildered by the many different views and opinions in many diverse fields to be found, such as physics, mathematics, philosophy, religion, history, and science fiction novels and films. This book will help you unravel fact from fiction. It provides a broad survey of many of these views, these images of time, covering historical, cultural, philosophical, biological, mathematical and physical images of time, including classical and quantum mechanics, special and general relativity and cosmology. This book gives you more than just a review of such images. It provides the reader a basis for judging the scientific soundness of these various images. It develops the reader's critical ability to distinguish Images of Time in terms of its contextual completeness. Differentiating between metaphysical images (which cannot be scientifically validated) and those that could, in principle, be put to empirical test. Showi...

  14. Automated segmentation of synchrotron radiation micro-computed tomography biomedical images using Graph Cuts and neural networks

    Science.gov (United States)

    Alvarenga de Moura Meneses, Anderson; Giusti, Alessandro; de Almeida, André Pereira; Parreira Nogueira, Liebert; Braz, Delson; Cely Barroso, Regina; deAlmeida, Carlos Eduardo

    2011-12-01

    Synchrotron Radiation (SR) X-ray micro-Computed Tomography (μCT) enables magnified images to be used as a non-invasive and non-destructive technique with a high space resolution for the qualitative and quantitative analyses of biomedical samples. The research on applications of segmentation algorithms to SR-μCT is an open problem, due to the interesting and well-known characteristics of SR images for visualization, such as the high resolution and the phase contrast effect. In this article, we describe and assess the application of the Energy Minimization via Graph Cuts (EMvGC) algorithm for the segmentation of SR-μCT biomedical images acquired at the Synchrotron Radiation for MEdical Physics (SYRMEP) beam line at the Elettra Laboratory (Trieste, Italy). We also propose a method using EMvGC with Artificial Neural Networks (EMANNs) for correcting misclassifications due to intensity variation of phase contrast, which are important effects and sometimes indispensable in certain biomedical applications, although they impair the segmentation provided by conventional techniques. Results demonstrate considerable success in the segmentation of SR-μCT biomedical images, with average Dice Similarity Coefficient 99.88% for bony tissue in Wistar Rats rib samples (EMvGC), as well as 98.95% and 98.02% for scans of Rhodnius prolixus insect samples (Chagas's disease vector) with EMANNs, in relation to manual segmentation. The techniques EMvGC and EMANNs cope with the task of performing segmentation in images with the intensity variation due to phase contrast effects, presenting a superior performance in comparison to conventional segmentation techniques based on thresholding and linear/nonlinear image filtering, which is also discussed in the present article.

  15. Automated segmentation of synchrotron radiation micro-computed tomography biomedical images using Graph Cuts and neural networks

    Energy Technology Data Exchange (ETDEWEB)

    Alvarenga de Moura Meneses, Anderson, E-mail: ameneses@ieee.org [Radiological Sciences Laboratory, Rio de Janeiro State University, Rua Sao Francisco Xavier 524, CEP 20550-900, RJ (Brazil); Giusti, Alessandro [IDSIA (Dalle Molle Institute for Artificial Intelligence), University of Lugano (Switzerland); Pereira de Almeida, Andre; Parreira Nogueira, Liebert; Braz, Delson [Nuclear Engineering Program, Federal University of Rio de Janeiro, RJ (Brazil); Cely Barroso, Regina [Laboratory of Applied Physics on Biomedical Sciences, Physics Department, Rio de Janeiro State University, RJ (Brazil); Almeida, Carlos Eduardo de [Radiological Sciences Laboratory, Rio de Janeiro State University, Rua Sao Francisco Xavier 524, CEP 20550-900, RJ (Brazil)

    2011-12-21

    Synchrotron Radiation (SR) X-ray micro-Computed Tomography ({mu}CT) enables magnified images to be used as a non-invasive and non-destructive technique with a high space resolution for the qualitative and quantitative analyses of biomedical samples. The research on applications of segmentation algorithms to SR-{mu}CT is an open problem, due to the interesting and well-known characteristics of SR images for visualization, such as the high resolution and the phase contrast effect. In this article, we describe and assess the application of the Energy Minimization via Graph Cuts (EMvGC) algorithm for the segmentation of SR-{mu}CT biomedical images acquired at the Synchrotron Radiation for MEdical Physics (SYRMEP) beam line at the Elettra Laboratory (Trieste, Italy). We also propose a method using EMvGC with Artificial Neural Networks (EMANNs) for correcting misclassifications due to intensity variation of phase contrast, which are important effects and sometimes indispensable in certain biomedical applications, although they impair the segmentation provided by conventional techniques. Results demonstrate considerable success in the segmentation of SR-{mu}CT biomedical images, with average Dice Similarity Coefficient 99.88% for bony tissue in Wistar Rats rib samples (EMvGC), as well as 98.95% and 98.02% for scans of Rhodnius prolixus insect samples (Chagas's disease vector) with EMANNs, in relation to manual segmentation. The techniques EMvGC and EMANNs cope with the task of performing segmentation in images with the intensity variation due to phase contrast effects, presenting a superior performance in comparison to conventional segmentation techniques based on thresholding and linear/nonlinear image filtering, which is also discussed in the present article.

  16. Contributions on biomedical imaging, with a side-look at molecular imaging; Beitraege zur biomedizinischen Bildgebung mit einem Seitenblick auf Molecular Imaging

    Energy Technology Data Exchange (ETDEWEB)

    Winkler, G. (ed.)

    2004-05-01

    This report is intended as a brief introduction to the emerging scientific field of biomedical imaging. The breadth of the subject is shown and future fields of research are indicated, which hopefully will serve as a guide to the identification of starting points for the research in 'Biomedical and/or Molecular Imaging' at the GSF-National Research Center for Environment and Health. The report starts with a brief sketch of the history. Then a - necessarily incomplete - list of research topics is presented. It is organized in two parts: the first one addresses medical imaging, and the second one is concerned with biological point aspects of the matter. (orig.) [German] In diesem Bericht sind einige Beitraege zum Gebiet 'Bildgebende Verfahren in Biologie und Medizin' zusammengestellt. Sie stammen saemtlich aus dem Institut fuer Biomathematik und Biometrie, IBB, am Forschungszentrum fuer Umwelt und Gesundheit, GSF, in Muenchen/Neuherberg, und seinem engeren Umfeld. Ziel war es, zu sichten, was in und um diesen Themenkreis herum an Wissen und sonstiger Kompetenz hier vorhanden ist. Einige am IBB etablierte Gebiete wie Roentgen-Mammographie oder funktionelle Magnetresonanztherapie wurden ausgeblendet. Der Grund ist die Fokussierung auf ein nicht exakt definierbares, neues Gebiet der Bildgebung, das unter dem Namen 'Molecular Imaging' kursiert und derzeit Furore macht macht. (orig.)

  17. Developing a competence-based core curriculum in biomedical laboratory science: a Delphi study.

    Science.gov (United States)

    Edgren, Gudrun

    2006-08-01

    In this study the Delphi technique has been used to develop a core curriculum for education of the biomedical scientist. The rapid development in biomedicine and the corresponding changes in methodology in biomedical laboratories demand careful planning of the education of biomedical scientists. The Delphi technique uses an anonymous panel of experts for suggestions and assessments aiming at consensus. Twenty-six experts from different kinds of hospital and university laboratories took part in the investigation. They suggested and assessed necessary competences for a recently graduated biomedical scientist, and if 75% or more of the participants agreed on a competence, it was included in the core curriculum. The final list consisted of 66 competences of varying depth, in three categories. This list contained several generic competences, concerning for example basic laboratory methods, handling of samples, dealing with apparatus and applying relevant rules and laws; basic knowledge in chemistry, preclinical medicine and laboratory methods; and finally attitudes that the panel expected in the recently graduated person. The core was sufficiently restricted to be used in a three-year programme and still leave space for about one year of electives/special study modules. It became rather traditional, e.g. it did not include competences that many recent reports consider important for the future professional. PMID:16973452

  18. Surveys of current status in biomedical science grant review: funding organisations' and grant reviewers' perspectives

    DEFF Research Database (Denmark)

    Schroter, Sara; Groves, Trish; Højgaard, Liselotte

    2010-01-01

    The objectives of this research were (a) to describe the current status of grant review for biomedical projects and programmes from the perspectives of international funding organisations and grant reviewers, and (b) to explore funders' interest in developing uniform requirements for grant review...

  19. Nanoscale metal-organic frameworks for biomedical imaging and drug delivery.

    Science.gov (United States)

    Della Rocca, Joseph; Liu, Demin; Lin, Wenbin

    2011-10-18

    Metal-organic frameworks (MOFs), a class of hybrid materials formed by the self-assembly of polydentate bridging ligands and metal-connecting points, have been studied for a variety of applications. Recently, these materials have been scaled down to nanometer sizes, and this Account details the development of nanoscale metal-organic frameworks (NMOFs) for biomedical applications. NMOFs possess several potential advantages over conventional nanomedicines such as their structural and chemical diversity, their high loading capacity, and their intrinsic biodegradability. Under relatively mild conditions, NMOFs can be obtained as either crystalline or amorphous materials. The particle composition, size, and morphology can be easily tuned to optimize the final particle properties. Researchers have employed two general strategies to deliver active agents using NMOFs: by incorporating active agents into the frameworks or by loading active agents into the pores and channels of the NMOFs. The modification of NMOF surfaces with either silica coatings or organic polymers improves NMOF stability, fine-tunes their properties, and imparts additional functionality. Preliminary biomedical applications of NMOFs have focused on their use as delivery vehicles for imaging contrast agents and molecular therapeutics. Because NMOFs can carry large amounts of paramagnetic metal ions, they have been extensively explored as magnetic resonance imaging (MRI) contrast agents. Both Gd(3+)- and Mn(2+)-containing NMOFs have shown excellent efficacy as T(1)-weighted contrast agents with large per metal- and per particle-based MR relaxivities. Fe(3+)-containing NMOFs have demonstrated excellent T(2)-weighted contrast enhancement. Upon intravenous injection of iron carboxylate NMOFs in Wistar rats, researchers observed negative signal enhancement in the liver and spleen, which dissipated over time, indicating the degradation and clearance of the NMOF. Through the incorporation of luminescent or high

  20. Understanding public opinion in debates over biomedical research: looking beyond political partisanship to focus on beliefs about science and society.

    Science.gov (United States)

    Nisbet, Matthew; Markowitz, Ezra M

    2014-01-01

    As social scientists have investigated the political and social factors influencing public opinion in science-related policy debates, there has been growing interest in the implications of this research for public communication and outreach. Given the level of political polarization in the United States, much of the focus has been on partisan differences in public opinion, the strategies employed by political leaders and advocates that promote those differences, and the counter-strategies for overcoming them. Yet this focus on partisan differences tends to overlook the processes by which core beliefs about science and society impact public opinion and how these schema are often activated by specific frames of reference embedded in media coverage and popular discourse. In this study, analyzing cross-sectional, nationally representative survey data collected between 2002 and 2010, we investigate the relative influence of political partisanship and science-related schema on Americans' support for embryonic stem cell research. In comparison to the influence of partisan identity, our findings suggest that generalized beliefs about science and society were more chronically accessible, less volatile in relation to media attention and focusing events, and an overall stronger influence on public opinion. Classifying respondents into four unique audience groups based on their beliefs about science and society, we additionally find that individuals within each of these groups split relatively evenly by partisanship but differ on other important dimensions. The implications for public engagement and future research on controversies related to biomedical science are discussed.

  1. Fundamental and applied studies in nanoparticle biomedical imaging, stabilization, and processing

    Science.gov (United States)

    Pansare, Vikram J.

    Nanoparticle carrier systems are gaining importance in the rapidly expanding field of biomedical whole animal imaging where they provide long circulating, real time imaging capability. This thesis presents a new paradigm in imaging whereby long wavelength fluorescent or photoacoustically active contrast agents are embedded in the hydrophobic core of nanocarriers formed by Flash NanoPrecipitation. The long wavelength allows for improved optical penetration depth. Compared to traditional contrast agents where fluorophores are placed on the surface, this allows for improved signal, increased stability, and molecular targeting capabilities. Several types of long wavelength hydrophobic dyes based on acene, cyanine, and bacteriochlorin scaffolds are utilized and animal results obtained for nanocarrier systems used in both fluorescent and photoacoustic imaging modes. Photoacoustic imaging is particularly promising due to its high resolution, excellent penetration depth, and ability to provide real-time functional information. Fundamental studies in nanoparticle stabilization are also presented for two systems: model alumina nanoparticles and charge stabilized polystyrene nanoparticles. Motivated by the need for stable suspensions of alumina-based nanocrystals for security printing applications, results are presented for the adsorption of various small molecule charged hydrophobes onto the surface of alumina nanoparticles. Results are also presented for the production of charge stabilized polystyrene nanoparticles via Flash NanoPrecipitation, allowing for the independent control of polymer molecular weight and nanoparticle size, which is not possible by traditional emulsion polymerization routes. Lastly, methods for processing nanoparticle systems are explored. The increasing use of nanoparticle therapeutics in the pharmaceutical industry has necessitated the development of scalable, industrially relevant processing methods. Ultrafiltration is particularly well suited for

  2. Progress toward automatic classification of human brown adipose tissue using biomedical imaging

    Science.gov (United States)

    Gifford, Aliya; Towse, Theodore F.; Walker, Ronald C.; Avison, Malcom J.; Welch, E. B.

    2015-03-01

    Brown adipose tissue (BAT) is a small but significant tissue, which may play an important role in obesity and the pathogenesis of metabolic syndrome. Interest in studying BAT in adult humans is increasing, but in order to quantify BAT volume in a single measurement or to detect changes in BAT over the time course of a longitudinal experiment, BAT needs to first be reliably differentiated from surrounding tissue. Although the uptake of the radiotracer 18F-Fluorodeoxyglucose (18F-FDG) in adipose tissue on positron emission tomography (PET) scans following cold exposure is accepted as an indication of BAT, it is not a definitive indicator, and to date there exists no standardized method for segmenting BAT. Consequently, there is a strong need for robust automatic classification of BAT based on properties measured with biomedical imaging. In this study we begin the process of developing an automated segmentation method based on properties obtained from fat-water MRI and PET-CT scans acquired on ten healthy adult subjects.

  3. Hyped biomedical science or uncritical reporting? Press coverage of genomics (1992-2001) in Québec.

    Science.gov (United States)

    Racine, Eric; Gareau, Isabelle; Doucet, Hubert; Laudy, Danielle; Jobin, Guy; Schraedley-Desmond, Pamela

    2006-03-01

    Genomics integrates the promises and perils of modern biomedical science. Canada and the province of Québec embarked late but aggressively in genomics research based on the 'discourse of promise' in which genomics is embedded. This did not prevent the emergence of a 'discourse of concerns', and debates on the wider meaning of genomics and on the risks related to genomics applications such as gene therapy and gene testing. Given this context, this study aims to understand the evolution of genomics press coverage from the early days up to the publication of the draft sequence of the human genome. Accordingly, we performed a press content analysis on 749 articles reporting genomics research in Québec from 1992 to 2001. We focused on coverage of benefits and ethical issues, tone, and differences in reporting practices between press agencies and journalists. Results show an increasing number of articles, a general decline in the proportion of articles featuring ethical issues, an increased focus on the economy, and greater optimism from 1992 to 2001. In comparison to articles written by journalists, articles signed by press agencies are more optimistic and less often feature ethical issues. Results are discussed following two non-exclusive interpretations: (1) the successes of genomics and its institutionalization in Québec and Canada brought hype and greater social acceptance, and (2) uncritical reporting practices have emerged under pressures for expedient and consumable writing. We are left with two concerns: given worldwide media concentration movements, what are the challenges for the dissemination of diversified and critical information in print media? And, given limited coverage of ethical issues, and concerns about bioethics being too narrowly focused, should public debates on frontier biomedical science be promoted to broaden the scope of biomedical ethics? PMID:16174544

  4. Combined X-ray CT and mass spectrometry for biomedical imaging applications

    International Nuclear Information System (INIS)

    Imaging technologies play a key role in many branches of science, especially in biology and medicine. They provide an invaluable insight into both internal structure and processes within a broad range of samples. There are many techniques that allow one to obtain images of an object. Different techniques are based on the analysis of a particular sample property by means of a dedicated imaging system, and as such, each imaging modality provides the researcher with different information. The use of multimodal imaging (imaging with several different techniques) can provide additional and complementary information that is not possible when employing a single imaging technique alone. In this study, we present for the first time a multi-modal imaging technique where X-ray computerized tomography (CT) is combined with mass spectrometry imaging (MSI). While X-ray CT provides 3-dimensional information regarding the internal structure of the sample based on X-ray absorption coefficients, MSI of thin sections acquired from the same sample allows the spatial distribution of many elements/molecules, each distinguished by its unique mass-to-charge ratio (m/z), to be determined within a single measurement and with a spatial resolution as low as 1 μm or even less. The aim of the work is to demonstrate how molecular information from MSI can be spatially correlated with 3D structural information acquired from X-ray CT. In these experiments, frozen samples are imaged in an X-ray CT setup using Medipix based detectors equipped with a CO2 cooled sample holder. Single projections are pre-processed before tomographic reconstruction using a signal-to-thickness calibration. In the second step, the object is sliced into thin sections (circa 20 μm) that are then imaged using both matrix-assisted laser desorption/ionization mass spectrometry (MALDI-MS) and secondary ion (SIMS) mass spectrometry, where the spatial distribution of specific molecules within the sample is determined. The

  5. Biomedical image representation approach using visualness and spatial information in a concept feature space for interactive region-of-interest-based retrieval.

    Science.gov (United States)

    Rahman, Md Mahmudur; Antani, Sameer K; Demner-Fushman, Dina; Thoma, George R

    2015-10-01

    This article presents an approach to biomedical image retrieval by mapping image regions to local concepts where images are represented in a weighted entropy-based concept feature space. The term "concept" refers to perceptually distinguishable visual patches that are identified locally in image regions and can be mapped to a glossary of imaging terms. Further, the visual significance (e.g., visualness) of concepts is measured as the Shannon entropy of pixel values in image patches and is used to refine the feature vector. Moreover, the system can assist the user in interactively selecting a region-of-interest (ROI) and searching for similar image ROIs. Further, a spatial verification step is used as a postprocessing step to improve retrieval results based on location information. The hypothesis that such approaches would improve biomedical image retrieval is validated through experiments on two different data sets, which are collected from open access biomedical literature.

  6. Introduction to biomedical engineering

    CERN Document Server

    Enderle, John

    2011-01-01

    Introduction to Biomedical Engineering is a comprehensive survey text for biomedical engineering courses. It is the most widely adopted text across the BME course spectrum, valued by instructors and students alike for its authority, clarity and encyclopedic coverage in a single volume. Biomedical engineers need to understand the wide range of topics that are covered in this text, including basic mathematical modeling; anatomy and physiology; electrical engineering, signal processing and instrumentation; biomechanics; biomaterials science and tissue engineering; and medical and engineering e

  7. The Biomedical Humanities program: merging humanities and science in a premedical curriculum at Hiram College.

    Science.gov (United States)

    Fried, Colleen; Madar, Sandra; Donley, Carol

    2003-10-01

    The Biomedical Humanities program at Hiram College, established in 1999, engages premedical and other qualified students in ethical and informed decision making, improves their ability to interact with persons of different backgrounds and cultures, provides them an active introduction to basic medical research and clinical practice, and coaches them in communicating across barriers, appreciating that scientists and humanists typically learn and work differently. The program offers both a major and a minor in biomedical humanities topics. The major requires the core biology and chemistry curriculum necessary for further studies in medicine as well as courses in genetics and statistics. The remainder of the major is devoted to four core areas: Communications, Relationships and Cultural Sensitivity, Ethics and Medical Humanities, and a nonacademic core area, Experiential Learning. Many of the ethics and medical humanities options are team-taught interdisciplinary courses. The Experiential Learning area requires students to take two special topics seminars, two service seminars, and two internships-one shadowing a professional in his or her area of interest and one engaging in basic biomedical research. The shadowing internship and service seminars focus not only on career exploration, but also on human interactions. Students reflect on the personal interactions they observe during their various experiences, and on their own strengths and weaknesses. Essays, designed to help students learn more about their roles in these settings, push them to deal with the sociopolitical issues involved in their service. The major, a robust and vital component of Hiram's undergraduate program, has attracted academically gifted students with a diverse array of career goals. PMID:14534095

  8. International Careers of Researchers in Biomedical Sciences: A Comparison of the US and the UK.

    OpenAIRE

    Lawson, Cornelia; Geuna, Aldo; Ana Fernández-Zubieta; Toselli, Manuel; Kataishi, Rodrigo

    2015-01-01

    This chapter analyses the mobility of academic biomedical researchers in the US and the UK. Both countries are at the forefront of research in biomedicine, and able to attract promising researchers from other countries as well as fostering mobility between the US and the UK. Using a database of 292 UK based academics and 327 US based academics covering the period 1956 to 2012, the descriptive analysis shows a high level of international mobility at education level (BA, PhD and Postdoc) with s...

  9. Deliberative ethics in a biomedical institution: an example of integration between science and ethics.

    Science.gov (United States)

    Boniolo, G; Di Fiore, P P

    2010-07-01

    The deliberative ethics guidelines elaborated and implemented by members of the IFOM-IEO Campus (Firc Institute of Molecular Oncology (IFOM) and the European Institute of Oncology (IEO)). These should serve the dual purpose of establishing a minimal set of standard rules for bioethical debate and any ensuing decision-making process, especially for the perspective of providing real instruments to foster public engagement and public awareness on the ethical issues involved in biomedical research. It is shown that these guidelines instantiate the scheme of one of the correct ways of debating formalised by the western thought. PMID:20605995

  10. Applications of systems science in biomedical research regarding obesity and noncommunicable chronic diseases: opportunities, promise, and challenges.

    Science.gov (United States)

    Wang, Youfa; Xue, Hong; Liu, Shiyong

    2015-01-01

    Interest in the application of systems science (SS) in biomedical research, particularly regarding obesity and noncommunicable chronic disease (NCD) research, has been growing rapidly over the past decade. SS is a broad term referring to a family of research approaches that include modeling. As an emerging approach being adopted in public health, SS focuses on the complex dynamic interaction between agents (e.g., people) and subsystems defined at different levels. SS provides a conceptual framework for interdisciplinary and transdisciplinary approaches that address complex problems. SS has unique advantages for studying obesity and NCD problems in comparison to the traditional analytic approaches. The application of SS in biomedical research dates back to the 1960s with the development of computing capacity and simulation software. In recent decades, SS has been applied to addressing the growing global obesity epidemic. There is growing appreciation and support for using SS in the public health field, with many promising opportunities. There are also many challenges and uncertainties, including methodologic, funding, and institutional barriers. Integrated efforts by stakeholders that address these challenges are critical for the successful application of SS in the future.

  11. Athena Wide Field Imager Key Science Drivers

    CERN Document Server

    Rau, Arne; Aird, James; Comastri, Andrea; Dauser, Thomas; Merloni, Andrea; Pratt, Gabriel W; Reiprich, Thomas H; Fabian, Andy C; Georgakakis, Antonis; Güdel, Manuel; Różańska, Agata; Sanders, Jeremy S; Sasaki, Manami; Vaughan, Simon; Wilms, Jörn; Meidinger, Norbert

    2016-01-01

    The Wide Field Imager (WFI) is one of two instruments for the Advanced Telescope for High-ENergy Astrophysics (Athena). In this paper we summarise three of the many key science objectives for the WFI - the formation and growth of supermassive black holes, non-gravitational heating in clusters of galaxies, and spin measurements of stellar mass black holes - and describe their translation into the science requirements and ultimately instrument requirements. The WFI will be designed to provide excellent point source sensitivity and grasp for performing wide area surveys, surface brightness sensitivity, survey power, and absolute temperature and density calibration for in-depth studies of the outskirts of nearby clusters of galaxies and very good high-count rate capability, throughput, and low pile-up, paired with very good spectral resolution, for detailed explorations of bright Galactic compact objects.

  12. Los Alamos Life Sciences Division's biomedical and environmental research programs. Progress report, January-December 1980

    International Nuclear Information System (INIS)

    Highlights of research progress accomplished in the Life Sciences Division during the year ending December 1980 are summarized. Reports from the following groups are included: Toxicology, Biophysics, Genetics; Environmental Pathology, Organic Chemistry, and Environmental Sciences. Individual abstracts have been prepared for 46 items for inclusion in the Energy Data Base

  13. 77 FR 64598 - Joint Biomedical Laboratory Research and Development and Clinical Science Research and...

    Science.gov (United States)

    2012-10-22

    ... and Behavioral Sciences- November 16, 2012...... *VA Central Office. B. Neurobiology-A November 16... Crystal City Hotel. Mental Health and Behavioral Sciences- November 20, 2012...... Sheraton Crystal City... Crystal City Hotel. Clinical Application of Genetics..... December 12, 2012...... *VA Central...

  14. Los Alamos Life Sciences Division's biomedical and environmental research programs. Progress report, January-December 1981. [Leading abstract

    Energy Technology Data Exchange (ETDEWEB)

    Holland, L.M.; Stafford, C.G. (comps.)

    1982-10-01

    This report summarizes research and development activities of the Los Alamos Life Sciences Division's Biomedical and Environmental Research program for the calendar year 1981. Individual reports describing the current status of projects have been entered individually into the data base.

  15. Biomedical and veterinary science can increase our understanding of coral disease

    Science.gov (United States)

    Work, T.M.; Richardson, L.L.; Reynolds, T.L.; Willis, B.L.

    2008-01-01

    A balanced approach to coral disease investigation is critical for understanding the global decline of corals. Such an approach should involve the proper use of biomedical concepts, tools, and terminology to address confusion and promote clarity in the coral disease literature. Investigating disease in corals should follow a logical series of steps including identification of disease, systematic morphologic descriptions of lesions at the gross and cellular levels, measurement of health indices, and experiments to understand disease pathogenesis and the complex interactions between host, pathogen, and the environment. This model for disease investigation is widely accepted in the medical, veterinary and invertebrate pathology disciplines. We present standard biomedical rationale behind the detection, description, and naming of diseases and offer examples of the application of Koch's postulates to elucidate the etiology of some infectious diseases. Basic epidemiologic concepts are introduced to help investigators think systematically about the cause(s) of complex diseases. A major goal of disease investigation in corals and other organisms is to gather data that will enable the establishment of standardized case definitions to distinguish among diseases. Concepts and facts amassed from empirical studies over the centuries by medical and veterinary pathologists have standardized disease investigation and are invaluable to coral researchers because of the robust comparisons they enable; examples of these are given throughout this paper. Arguments over whether coral diseases are caused by primary versus opportunistic pathogens reflect the lack of data available to prove or refute such hypotheses and emphasize the need for coral disease investigations that focus on: characterizing the normal microbiota and physiology of the healthy host; defining ecological interactions within the microbial community associated with the host; and investigating host immunity, host

  16. WebMedSA: a web-based framework for segmenting and annotating medical images using biomedical ontologies

    Science.gov (United States)

    Vega, Francisco; Pérez, Wilson; Tello, Andrés.; Saquicela, Victor; Espinoza, Mauricio; Solano-Quinde, Lizandro; Vidal, Maria-Esther; La Cruz, Alexandra

    2015-12-01

    Advances in medical imaging have fostered medical diagnosis based on digital images. Consequently, the number of studies by medical images diagnosis increases, thus, collaborative work and tele-radiology systems are required to effectively scale up to this diagnosis trend. We tackle the problem of the collaborative access of medical images, and present WebMedSA, a framework to manage large datasets of medical images. WebMedSA relies on a PACS and supports the ontological annotation, as well as segmentation and visualization of the images based on their semantic description. Ontological annotations can be performed directly on the volumetric image or at different image planes (e.g., axial, coronal, or sagittal); furthermore, annotations can be complemented after applying a segmentation technique. WebMedSA is based on three main steps: (1) RDF-ization process for extracting, anonymizing, and serializing metadata comprised in DICOM medical images into RDF/XML; (2) Integration of different biomedical ontologies (using L-MOM library), making this approach ontology independent; and (3) segmentation and visualization of annotated data which is further used to generate new annotations according to expert knowledge, and validation. Initial user evaluations suggest that WebMedSA facilitates the exchange of knowledge between radiologists, and provides the basis for collaborative work among them.

  17. A Traveling Exhibit of Cassini Image Science

    Science.gov (United States)

    Burns, Joseph A.; Hedman, M. M.; Tiscareno, M. S.; Ebel, D.; Mac Low, M.; Lovett, L. E.; Burns, J. K.; Schaff, N.; Bilson, E. M.

    2007-10-01

    An exhibit of Cassini's images will open at NYC's American Museum of Natural History in March 2008 and then visit the Johnson Art Museum (Cornell) throughout fall 2008, including during next year's DPS. It is under consideration by several other venues in the States and overseas. The exhibit will feature 40-50 images, ranging from letter size to large posters, taken by remote-sensing instruments aboard Cassini and Huygens. Photos will be organized into a half-dozen thematic clusters (e.g., organized by celestial target or by physical process); a panel will introduce each grouping with individual images identified briefly. The Saturn system is a perfect vehicle to educate citizens about planetary science and origins. The images’ beauty should capture the public's attention, allowing us to then engage their curiosity about the relevant science. Among the Saturn system's broad suite of objects are Enceladus and Titan, two satellites of astrobiological interest; moreover, the rings display many processes active in other astrophysical disks. Several auxiliary ideas will be implemented. In Ithaca, we will project images at night against the museum's sand-colored exterior walls. A 10-12 minute musical composition has been commissioned from Roberto Sierra to open the show. We will encourage school children to participate in a human orrery circling the museum and will seek volunteers to participate in several Saturnalia. At Cornell we will involve the university and local communities, by taping their reactions to the images’ exquisite beauty as well as to their scientific content. Cassini will be the E/PO focus of next year's DPS meeting; those materials will be employed throughout the fall at New York schools and be available to travel with the show. We intend to work with NYC partners to offer teacher credits for associated weekend courses. We will produce classroom materials, including a DVD, for teacher use.

  18. Improving Graduate Education to Support a Branching Career Pipeline: Recommendations Based on a Survey of Doctoral Students in the Basic Biomedical Sciences

    OpenAIRE

    Fuhrmann, C. N.; Halme, D. G.; O’Sullivan, P. S.; Lindstaedt, B.

    2011-01-01

    Today's doctoral programs continue to prepare students for a traditional academic career path despite the inadequate supply of research-focused faculty positions. We advocate for a broader doctoral curriculum that prepares trainees for a wide range of science-related career paths. In support of this argument, we describe data from our survey of doctoral students in the basic biomedical sciences at University of California, San Francisco (UCSF). Midway through graduate training, UCSF students ...

  19. Is basic science disappearing from medicine? The decline of biomedical research in the medical literature.

    Science.gov (United States)

    Steinberg, Benjamin E; Goldenberg, Neil M; Fairn, Gregory D; Kuebler, Wolfgang M; Slutsky, Arthur S; Lee, Warren L

    2016-02-01

    Explosive growth in our understanding of genomics and molecular biology have fueled calls for the pursuit of personalized medicine, the notion of harnessing biologic variability to provide patient-specific care. This vision will necessitate a deep understanding of the underlying pathophysiology in each patient. Medical journals play a pivotal role in the education of trainees and clinicians, yet we suspected that the amount of basic science in the top medical journals has been in decline. We conducted an automated search strategy in PubMed to identify basic science articles and calculated the proportion of articles dealing with basic science in the highest impact journals for 8 different medical specialties from 1994 to 2013. We observed a steep decline (40-60%) in such articles over time in almost all of the journals examined. This rapid decline in basic science from medical journals is likely to affect practitioners' understanding of and interest in the basic mechanisms of disease and therapy. In this Life Sciences Forum, we discuss why this decline may be occurring and what it means for the future of science and medicine.

  20. Choosing and Using Images in Environmental Science Education

    Science.gov (United States)

    Muthersbaugh, Debbie Smick

    2012-01-01

    Although using images for teaching has been a common practice in science classrooms (Gordon & Pea, 1995) understanding the purpose or how to choose images has not typically been intentional. For this dissertation three separate studies relating to choosing and using images are prepared with environmental science in mind. Each of the studies…

  1. Using a popular science nonfiction book to introduce biomedical research ethics in a biology majors course.

    Science.gov (United States)

    Walton, Kristen L W

    2014-12-01

    Although bioethics is an important topic in modern society, it is not a required part of the curriculum for many biology degree programs in the United States. Students in our program are exposed to biologically relevant ethical issues informally in many classes, but we do not have a requirement for a separate bioethics course. The Immortal Life of Henrietta Lacks is a recent nonfiction book that describes the life of the woman whose cervical cancer biopsy gave rise to the HeLa cell line, as well as discussing relevant medical, societal, and ethical issues surrounding human tissue use for research. Weekly reading assignments from the book with discussion questions and a final paper were used to engage students in learning about the ethics of human subjects and human tissues research. Students were surveyed for qualitative feedback on the usefulness of including this book as part of the course. This book has been a successful platform for increasing student knowledge and interest in ethics related to biomedical and biological research.

  2. Using a Popular Science Nonfiction Book to Introduce Biomedical Research Ethics in a Biology Majors Course

    Directory of Open Access Journals (Sweden)

    Kristen L.W. Walton

    2014-08-01

    Full Text Available Although bioethics is an important topic in modern society, it is not a required part of the curriculum for many biology degree programs in the United States.  Students in our program are exposed to biologically relevant ethical issues informally in many classes, but we do not have a requirement for a separate bioethics course.  The Immortal Life of Henrietta Lacks is a recent nonfiction book that describes the life of the woman whose cervical cancer biopsy gave rise to the HeLa cell line, as well as discussing relevant medical, societal, and ethical issues surrounding human tissue use for research.  Weekly reading assignments from the book with discussion questions and a final paper were used to engage students in learning about the ethics of human subjects and human tissues research.  Students were surveyed for qualitative feedback on the usefulness of including this book as part of the course.  This book has been a successful platform for increasing student knowledge and interest in ethics related to biomedical and biological research.

  3. Inelastic photon scattering: Effects and applications in biomedical science and industry

    Science.gov (United States)

    Harding, G.

    1997-07-01

    Compton scattering is widely used to analyse electron momentum distributions in solid state systems. Perhaps less well-known is its role as the major cause of image contrast in medical and industrial radiography. This article discusses the principles and applications of a technique, known as Compton scatter imaging (CSI), which is based on direct registration of the Compton scatter radiation. Following a historical survey of the major developments in this field, the strengths and weaknesses of transmission radiography and Compton scatter imaging are compared in order to determine those measurement situations to which the latter is best suited. A description is given of several disturbing effects to which CSI is prone and ways in which these may be accounted for to yield quantitative density data are presented. The most important types of imaging system based on Compton scatter are discussed and compared. The ComScan (an acronym for Compton scatter scanner) is a commercially-available backscatter imaging system which is discussed here in some detail. ComScan images taken from applications of topical and historical interest are presented.

  4. 78 FR 22622 - Joint Biomedical Laboratory Research and Development and Clinical Science Research and...

    Science.gov (United States)

    2013-04-16

    ... Health and Behavioral. May 30, 2013 Sheraton Crystal City Hotel. Sciences--A. Gastroenterology May 30-31... Office.* Endocrinology--B June 4, 2013 Sheraton Crystal City Hotel. Mental Health and Behavioral. June 6... Application of Genetics..... June 18, 2013 Ritz-Carlton, Pentagon City. Eligibility July 15, 2013...

  5. 77 FR 23810 - Joint Biomedical Laboratory Research and Development and Clinical Science Research and...

    Science.gov (United States)

    2012-04-20

    ...) Location Hematology May 23, 2012........ Sheraton Suites--Old Town Alexandria. Mental Health and Behavioral... Alexandria. Mental Health and Behavioral May 31, 2012........ Sheraton Suites--Old Town Alexandria. Science-A........... * VA Central Office. Genetics. Cardiovascular Studies...... June 4, 2012........ Sheraton...

  6. 77 FR 20489 - Joint Biomedical Laboratory Research and Development and Clinical Science Research and...

    Science.gov (United States)

    2012-04-04

    ...) Location Hematology May 23, 2012..... Sheraton Suites--Old Town Alexandria. Mental Health and Behavioral.... Mental Health and Behavioral May 31, 2012..... Sheraton Suites--Old Science-A. Town Alexandria. Surgery........ *VA Central Office. Genetics. Cardiovascular Studies........ June 4, 2012..... Sheraton...

  7. Making Bioinformatics Projects a Meaningful Experience in an Undergraduate Biotechnology or Biomedical Science Programme

    Science.gov (United States)

    Sutcliffe, Iain C.; Cummings, Stephen P.

    2007-01-01

    Bioinformatics has emerged as an important discipline within the biological sciences that allows scientists to decipher and manage the vast quantities of data (such as genome sequences) that are now available. Consequently, there is an obvious need to provide graduates in biosciences with generic, transferable skills in bioinformatics. We present…

  8. Leading Change: Curriculum Reform in Graduate Education in the Biomedical Sciences

    Science.gov (United States)

    Dasgupta, Shoumita; Symes, Karen; Hyman, Linda

    2015-01-01

    The Division of Graduate Medical Sciences at the Boston University School of Medicine houses numerous dynamic graduate programs. Doctoral students began their studies with laboratory rotations and classroom training in a variety of fundamental disciplines. Importantly, with 15 unique pathways of admission to these doctoral programs, there were…

  9. Beyond Preparation: Identity, Cultural Capital, and Readiness for Graduate School in the Biomedical Sciences

    Science.gov (United States)

    Gazley, J. Lynn; Remich, Robin; Naffziger-Hirsch, Michelle E.; Keller, Jill; Campbell, Patricia B.; McGee, Richard

    2014-01-01

    In this study, we conducted in-depth interviews with 52 college graduates as they entered a Postbaccalaureate Research Education Program (PREP). Our goal was to investigate what it means for these aspiring scientists, most of whom are from groups underrepresented in the sciences, to feel ready to apply to a doctoral program in the biomedical…

  10. Nanodiamond-Based Composite Structures for Biomedical Imaging and Drug Delivery.

    Science.gov (United States)

    Rosenholm, Jessica M; Vlasov, Igor I; Burikov, Sergey A; Dolenko, Tatiana A; Shenderova, Olga A

    2015-02-01

    Nanodiamond particles are widely recognized candidates for biomedical applications due to their excellent biocompatibility, bright photoluminescence based on color centers and outstanding photostability. Recently, more complex architectures with a nanodiamond core and an external shell or nanostructure which provides synergistic benefits have been developed, and their feasibility for biomedical applications has been demonstrated. This review is aimed at summarizing recent achievements in the fabrication and functional demonstrations of nanodiamond-based composite structures, along with critical considerations that should be taken into account in the design of such structures from a biomedical point of view. A particular focus of the review is core/shell structures of nanodiamond surrounded by porous silica shells, which demonstrate a remarkable increase in drug loading efficiency; as well as nanodiamonds decorated with carbon dots, which have excellent potential as bioimaging probes. Other combinations are also considered, relying on the discussed inherent properties of the inorganic materials being integrated in a way to advance inorganic nanomedicine in the quest for better health-related nanotechnology. PMID:26353602

  11. [A study of development of medicine and science in the nineteenth century science fiction: biomedical experiments in Mary Shelley's Frankenstein].

    Science.gov (United States)

    Choo, Jae-Uk

    2014-12-01

    As the sciences advanced rapidly in the modern European world, outstanding achievements have been made in medicine, chemistry, biology, physiology, physics and others, which have been co-influencing each of the scientific disciplines. Accordingly, such medical and scientific phenomena began to be reflected in novels. In particular, Mary Shelley's Frankenstein includes the diverse aspects of the change and development in the medicine and science. Associated with medical and scientific information reflected in Frankenstein and Frankenstein's experiments in the text, accordingly, this research will investigate the aspects of medical and scientific development taking place in the nineteenth century in three ways. First, the medical and scientific development of the nineteenth century has been reviewed by summerizing both the information of alchemy in which Frankenstein shows his interest and the new science in general that M. Waldman introduces in the text. Second, the actual features of medical and scientific development have been examined through some examples of the experimental methods that M. Waldman implicitly uttered to Frankenstein. Third, it has been checked how the medical and scientific development is related to the main issues of mechanism and vitalism which can be explained as principles of life. Even though this research deals with the developmental process of medicine & science and origin & principles of life implied in Mary Shelley's Frankenstein, its significance is that it is the interdisciplinary research focussing on how deeply medical and scientific discourse of Mary Shelley's period has been imbedded in the nineteenth century novel.

  12. Camera systems in human motion analysis for biomedical applications

    Science.gov (United States)

    Chin, Lim Chee; Basah, Shafriza Nisha; Yaacob, Sazali; Juan, Yeap Ewe; Kadir, Aida Khairunnisaa Ab.

    2015-05-01

    Human Motion Analysis (HMA) system has been one of the major interests among researchers in the field of computer vision, artificial intelligence and biomedical engineering and sciences. This is due to its wide and promising biomedical applications, namely, bio-instrumentation for human computer interfacing and surveillance system for monitoring human behaviour as well as analysis of biomedical signal and image processing for diagnosis and rehabilitation applications. This paper provides an extensive review of the camera system of HMA, its taxonomy, including camera types, camera calibration and camera configuration. The review focused on evaluating the camera system consideration of the HMA system specifically for biomedical applications. This review is important as it provides guidelines and recommendation for researchers and practitioners in selecting a camera system of the HMA system for biomedical applications.

  13. Healthcare and biomedical technology in the 21st century an introduction for non-science majors

    CERN Document Server

    Baran, George R; Samuel, Solomon Praveen

    2014-01-01

    This textbook introduces students not pursuing degrees in science or engineering to the remarkable new applications of technology now available to physicians and their patients and discusses how these technologies are evolving to permit new treatments and procedures.  The book also elucidates the societal and ethical impacts of advances in medical technology, such as extending life and end of life decisions, the role of genetic testing, confidentiality, costs of health care delivery, scrutiny of scientific claims, and provides background on the engineering approach in healthcare and the scientific method as a guiding principle. This concise, highly relevant text enables faculty to offer a substantive course for students from non-scientific backgrounds that will empower them to make more informed decisions about their healthcare by significantly enhancing their understanding of these technological advancements. This book also: ·         Presents scientific concepts from modern medical science using r...

  14. Severo Ochoa and the Biomedical Sciences in Spain under Franco, 1959-1975

    OpenAIRE

    Santesmases, María Jesús

    2000-01-01

    The influence of Severo Ochoa in the establishment of biochemistry and molecular biology in Spain is the central topic of this essay. From the time he was awarded the Nobel Prize in Physiology or Medicine in 1959, Ochoa's links with Spanish scientists and top authorities in education and science became instrumental to the development of these areas in the country of his birth. Ochoa's influence is analyzed through investigation of three "events": the reception of the award in Spain and some o...

  15. Opportunities in Participatory Science and Citizen Science with MRO's High Resolution Imaging Science Experiment: A Virtual Science Team Experience

    Science.gov (United States)

    Gulick, Ginny

    2009-09-01

    We report on the accomplishments of the HiRISE EPO program over the last two and a half years of science operations. We have focused primarily on delivering high impact science opportunities through our various participatory science and citizen science websites. Uniquely, we have invited students from around the world to become virtual HiRISE team members by submitting target suggestions via our HiRISE Quest Image challenges using HiWeb the team's image suggestion facility web tools. When images are acquired, students analyze their returned images, write a report and work with a HiRISE team member to write a image caption for release on the HiRISE website (http://hirise.lpl.arizona.edu). Another E/PO highlight has been our citizen scientist effort, HiRISE Clickworkers (http://clickworkers.arc.nasa.gov/hirise). Clickworkers enlists volunteers to identify geologic features (e.g., dunes, craters, wind streaks, gullies, etc.) in the HiRISE images and help generate searchable image databases. In addition, the large image sizes and incredible spatial resolution of the HiRISE camera can tax the capabilities of the most capable computers, so we have also focused on enabling typical users to browse, pan and zoom the HiRISE images using our HiRISE online image viewer (http://marsoweb.nas.nasa.gov/HiRISE/hirise_images/). Our educational materials available on the HiRISE EPO web site (http://hirise.seti.org/epo) include an assortment of K through college level, standards-based activity books, a K through 3 coloring/story book, a middle school level comic book, and several interactive educational games, including Mars jigsaw puzzles, crosswords, word searches and flash cards.

  16. Development of A Biomedical Imaging Informatics System for Diagnosis and Treatment Planning

    OpenAIRE

    Wang, Geoffrey; Wang, May D.

    2003-01-01

    The medical imaging technologies have been used for detecting tumors through the years. Tumors that can be viewed in imaging are usually big enough to contain billion tumor cells. Some patients may be cured if detected earlier and the surgery is performed well. Those lead to molecular imaging and image-guided surgery research activities, which post new challenges on large scale imaging data management and 3-D visualization. The goal of this project is to develop 3-D imaging informatics system...

  17. Retrieving biomedical images through content-based learning from examples using fine granularity

    Science.gov (United States)

    Jiang, Hao; Xu, Songhua; Lau, Francis C. M.

    2012-02-01

    Traditional content-based image retrieval methods based on learning from examples analyze and attempt to understand high-level semantics of an image as a whole. They typically apply certain case-based reasoning technique to interpret and retrieve images through measuring the semantic similarity or relatedness between example images and search candidate images. The drawback of such a traditional content-based image retrieval paradigm is that the summation of imagery contents in an image tends to lead to tremendous variation from image to image. Hence, semantically related images may only exhibit a small pocket of common elements, if at all. Such variability in image visual composition poses great challenges to content-based image retrieval methods that operate at the granularity of entire images. In this study, we explore a new content-based image retrieval algorithm that mines visual patterns of finer granularities inside a whole image to identify visual instances which can more reliably and generically represent a given search concept. We performed preliminary experiments to validate our new idea for content-based image retrieval and obtained very encouraging results.

  18. Iodine-129 AMS for Earth Science, Biomedical, and National Security Applications

    International Nuclear Information System (INIS)

    This Laboratory Directed Research and Development project created the capability to analyze the radionuclide iodine-129 (129I) by accelerator mass spectrometry (AMS) in the CAMS facility at LLNL, and enhanced our scientific foundation for its application through development of sample preparation technology required for environmental, biomedical, and national security applications. The project greatly improved our environmental iodine extraction and concentration methodology, and developed new techniques for the analysis of small quantities of 129I. The project can be viewed as having two phases, one in which the basic instrumental and chemical extraction methods necessary for general 129I analysis were developed, and a second in which these techniques were improved and new techniques were developed to enable broader and more sophisticated applications. The latter occurred through the mechanism of four subprojects that also serve as proof-of-principle demonstrations of our newly developed 129I capabilities. The first subproject determined the vertical distribution of bomb-pulse 129I (129Iv distributed globally as fallout from 1950's atmospheric nuclear testing) through 5 meters in the upper vadose zone in the arid southwestern United States. This characterizes migration mechanisms of contaminant 129I, or 129I released by nuclear fuel reprocessing, as well as the migration of labile iodine in soils relative to moisture flux, permitting a determination of nutrient cycling. The second subproject minimized the amount of iodine required in an AMS sample target. Because natural iodine abundances are very low in almost all environments, many areas of research had been precluded or made extremely difficult by the demands of sample size. Also, certain sample types of potential interest to national security are intrinsically small - for example iodine on air filters. The result of this work is the ability to measure the 129I/127I ratio at the 2E-07 level or higher in a sample

  19. Iodine-129 AMS for Earth Science, Biomedical, and National Security Applications

    Energy Technology Data Exchange (ETDEWEB)

    Nimz, G; Brown, T; Tumey, S; Marchetti, A; Vu, A

    2007-02-20

    This Laboratory Directed Research and Development project created the capability to analyze the radionuclide iodine-129 ({sup 129}I) by accelerator mass spectrometry (AMS) in the CAMS facility at LLNL, and enhanced our scientific foundation for its application through development of sample preparation technology required for environmental, biomedical, and national security applications. The project greatly improved our environmental iodine extraction and concentration methodology, and developed new techniques for the analysis of small quantities of {sup 129}I. The project can be viewed as having two phases, one in which the basic instrumental and chemical extraction methods necessary for general {sup 129}I analysis were developed, and a second in which these techniques were improved and new techniques were developed to enable broader and more sophisticated applications. The latter occurred through the mechanism of four subprojects that also serve as proof-of-principle demonstrations of our newly developed {sup 129}I capabilities. The first subproject determined the vertical distribution of bomb-pulse {sup 129}I ({sup 129}Iv distributed globally as fallout from 1950's atmospheric nuclear testing) through 5 meters in the upper vadose zone in the arid southwestern United States. This characterizes migration mechanisms of contaminant {sup 129}I, or {sup 129}I released by nuclear fuel reprocessing, as well as the migration of labile iodine in soils relative to moisture flux, permitting a determination of nutrient cycling. The second subproject minimized the amount of iodine required in an AMS sample target. Because natural iodine abundances are very low in almost all environments, many areas of research had been precluded or made extremely difficult by the demands of sample size. Also, certain sample types of potential interest to national security are intrinsically small - for example iodine on air filters. The result of this work is the ability to measure the

  20. A game-based platform for crowd-sourcing biomedical image diagnosis and standardized remote training and education of diagnosticians

    Science.gov (United States)

    Feng, Steve; Woo, Minjae; Chandramouli, Krithika; Ozcan, Aydogan

    2015-03-01

    Over the past decade, crowd-sourcing complex image analysis tasks to a human crowd has emerged as an alternative to energy-inefficient and difficult-to-implement computational approaches. Following this trend, we have developed a mathematical framework for statistically combining human crowd-sourcing of biomedical image analysis and diagnosis through games. Using a web-based smart game (BioGames), we demonstrated this platform's effectiveness for telediagnosis of malaria from microscopic images of individual red blood cells (RBCs). After public release in early 2012 (http://biogames.ee.ucla.edu), more than 3000 gamers (experts and non-experts) used this BioGames platform to diagnose over 2800 distinct RBC images, marking them as positive (infected) or negative (non-infected). Furthermore, we asked expert diagnosticians to tag the same set of cells with labels of positive, negative, or questionable (insufficient information for a reliable diagnosis) and statistically combined their decisions to generate a gold standard malaria image library. Our framework utilized minimally trained gamers' diagnoses to generate a set of statistical labels with an accuracy that is within 98% of our gold standard image library, demonstrating the "wisdom of the crowd". Using the same image library, we have recently launched a web-based malaria training and educational game allowing diagnosticians to compare their performance with their peers. After diagnosing a set of ~500 cells per game, diagnosticians can compare their quantified scores against a leaderboard and view their misdiagnosed cells. Using this platform, we aim to expand our gold standard library with new RBC images and provide a quantified digital tool for measuring and improving diagnostician training globally.

  1. Some Aspects of the State-of-the-Arts in Biomedical Science Research: A Perspective for Organizational Change in African Academia.

    Science.gov (United States)

    John, Theresa Adebola

    2014-01-01

    In the biomedical sciences, there is need to generate solutions for Africa's health and economic problems through the impact of university research. To guide organizational transformation, the author here presents some aspects of the state-of-the-arts of biomedical science research in advanced countries using a perspective derived from the FASEB journal publications. The author examines the thirty three peer reviewed scientific research articles in a centennial (April 2012) issue of the FASEB Journal [Volume 26(4)] using the following parameters: number of authors contributing to the paper; number of academic departments contributing to the paper; number of academic institutions contributing to the paper; funding of the research reported in the article. The articles were written by 7.97±0.61 authors from 3.46±0.3 departments of 2.79±0.29 institutions. The contributors were classified into four categories: basic sciences, clinical sciences, institutions and centers, and programs and labs. Amongst the publications, 21.2% were single disciplinary. Two tier collaboration amongst any two of the four categories were observed in 16/33 (48.5%) of the articles. Three tier and four tier collaborations were observed amongst 7/33 (21.2%) and 3/33 (9%) of the articles respectively. Therefore 26/33 (78.7%) of the articles were multidisciplinary. Collaborative efforts between basic science and clinical science departments were observed in 9/33 (27.3%) articles. Public funding through government agencies provided 85 out of a total of 143 (59.5%) grants. The collaborative and multidisciplinary nature and government support are characteristic of biomedical science in the US where research tends to result in solutions to problems and economic benefits.

  2. The importance of being elegant: a discussion of elegance in nephrology and biomedical science.

    Science.gov (United States)

    Nathan, Marco J; Brancaccio, Diego

    2013-06-01

    Elegance is pursued and appreciated in virtually all aspects of our lives, from fashion to visual and performing arts, from literature to architecture. While most of us praise the elegance and beauty of science when we see it, elegance is typically treated as something that need not concern our research and thus does not belong inside the laboratory. In this article, we provide an alternative perspective, according to which elegance is more than an accessory ornament of scientific theories. We endorse and defend the view that elegance is an intrinsic feature of successful scientific practice and observation, a benchmark that demarcates between good experiments and bad ones. In support of our conclusions, we present and discuss three paradigms of scientific elegance: Jenner's discovery of vaccination, Bricker and Slatopolsky's trade-off hypothesis and Brenner's hypothesis regarding the role of residual nephrons in the decline of renal function.

  3. Biomedical Science, Unit II: Nutrition in Health and Medicine. Digestion of Foods; Organic Chemistry of Nutrients; Energy and Cell Respiration; The Optimal Diet; Foodborne Diseases; Food Technology; Dental Science and Nutrition. Student Text. Revised Version, 1975.

    Science.gov (United States)

    Biomedical Interdisciplinary Curriculum Project, Berkeley, CA.

    This student text presents instructional materials for a unit of science within the Biomedical Interdisciplinary Curriculum Project (BICP), a two-year interdisciplinary precollege curriculum aimed at preparing high school students for entry into college and vocational programs leading to a career in the health field. Lessons concentrate on…

  4. NeuroTerrain – a client-server system for browsing 3D biomedical image data sets

    Directory of Open Access Journals (Sweden)

    Nissanov Jonathan

    2007-02-01

    Full Text Available Abstract Background Three dimensional biomedical image sets are becoming ubiquitous, along with the canonical atlases providing the necessary spatial context for analysis. To make full use of these 3D image sets, one must be able to present views for 2D display, either surface renderings or 2D cross-sections through the data. Typical display software is limited to presentations along one of the three orthogonal anatomical axes (coronal, horizontal, or sagittal. However, data sets precisely oriented along the major axes are rare. To make fullest use of these datasets, one must reasonably match the atlas' orientation; this involves resampling the atlas in planes matched to the data set. Traditionally, this requires the atlas and browser reside on the user's desktop; unfortunately, in addition to being monolithic programs, these tools often require substantial local resources. In this article, we describe a network-capable, client-server framework to slice and visualize 3D atlases at off-axis angles, along with an open client architecture and development kit to support integration into complex data analysis environments. Results Here we describe the basic architecture of a client-server 3D visualization system, consisting of a thin Java client built on a development kit, and a computationally robust, high-performance server written in ANSI C++. The Java client components (NetOStat support arbitrary-angle viewing and run on readily available desktop computers running Mac OS X, Windows XP, or Linux as a downloadable Java Application. Using the NeuroTerrain Software Development Kit (NT-SDK, sophisticated atlas browsing can be added to any Java-compatible application requiring as little as 50 lines of Java glue code, thus making it eminently re-useable and much more accessible to programmers building more complex, biomedical data analysis tools. The NT-SDK separates the interactive GUI components from the server control and monitoring, so as to support

  5. Career Coaches as a Source of Vicarious Learning for Racial and Ethnic Minority PhD Students in the Biomedical Sciences: A Qualitative Study

    Science.gov (United States)

    Williams, Simon N.; Thakore, Bhoomi K.; McGee, Richard

    2016-01-01

    Introduction Many recent mentoring initiatives have sought to help improve the proportion of underrepresented racial and ethnic minorities (URMs) in academic positions across the biomedical sciences. However, the intractable nature of the problem of underrepresentation suggests that many young scientists may require supplemental career development beyond what many mentors are able to offer. As an adjunct to traditional scientific mentoring, we created a novel academic career “coaching” intervention for PhD students in the biomedical sciences. Objective To determine whether and how academic career coaches can provide effective career-development-related learning experiences for URM PhD students in the biomedical sciences. We focus specifically on vicarious learning experiences, where individuals learn indirectly through the experiences of others. Method The intervention is being tested as part of a longitudinal randomized control trial (RCT). Here, we describe a nested qualitative study, using a framework approach to analyze data from a total of 48 semi-structured interviews from 24 URM PhD students (2 interviews per participant, 1 at baseline, 1 at 12-month follow-up) (16 female, 8 male; 11 Black, 12 Hispanic, 1 Native-American). We explored the role of the coach as a source of vicarious learning, in relation to the students’ goal of being future biomedical science faculty. Results Coaches were resources through which most students in the study were able to learn vicariously about how to pursue, and succeed within, an academic career. Coaches were particularly useful in instances where students’ research mentors are unable to provide such vicarious learning opportunities, for example because the mentor is too busy to have career-related discussions with a student, or because they have, or value, a different type of academic career to the type the student hopes to achieve. Implications Coaching can be an important way to address the lack of structured career

  6. Handbook of coherent domain optical methods biomedical diagnostics, environmental and material science

    CERN Document Server

    2004-01-01

    For the first time in one set of books, coherent-domain optical methods are discussed in the framework of various applications, which are characterized by a strong light scattering. A few chapters describe basic research containing the updated results on coherent and polarized light non-destructive interactions with a scattering medium, in particular, diffraction, interference, and speckle formation at multiple scattering. These chapters allow for understanding coherent-domain diagnostic techniques presented in later chapters. A large portion of Volume I is dedicated to analysis of various aspects of optical coherence tomography (OCT) - a very new and growing field of coherent optics. Two chapters on laser scanning confocal microscopy give insight to recent extraordinary results on in vivo imaging and compare the possibilities and achievements of confocol, excitation multiphoton, and OCT microscopy. This two volume reference contains descriptions of holography, interferometry and optical heterodyning techniqu...

  7. Biomedical engineering fundamentals

    CERN Document Server

    Bronzino, Joseph D; Bronzino, Joseph D

    2006-01-01

    Over the last century,medicine has come out of the "black bag" and emerged as one of the most dynamic and advanced fields of development in science and technology. Today, biomedical engineering plays a critical role in patient diagnosis, care, and rehabilitation. As such, the field encompasses a wide range of disciplines, from biology and physiology to informatics and signal processing. Reflecting the enormous growth and change in biomedical engineering during the infancy of the 21st century, The Biomedical Engineering Handbook enters its third edition as a set of three carefully focused and

  8. Advances in Biomedical Imaging, Bioengineering, and Related Technologies for the Development of Biomarkers of Pancreatic Disease: Summary of a National Institute of Diabetes and Digestive and Kidney Diseases and National Institute of Biomedical Imaging and Bioengineering Workshop.

    Science.gov (United States)

    Kelly, Kimberly A; Hollingsworth, Michael A; Brand, Randall E; Liu, Christina H; Singh, Vikesh K; Srivastava, Sudhir; Wasan, Ajay D; Yadav, Dhiraj; Andersen, Dana K

    2015-11-01

    A workshop sponsored by the National Institute of Diabetes and Digestive and Kidney Diseases and the National Institute of Biomedical Imaging and Bioengineering focused on research gaps and opportunities in the development of new biomarkers of pancreatic disease. The session was held on July 22, 2015, and structured into 6 sessions: 1) Introduction and Overview; 2) Keynote Address; 3) New Approaches to the Diagnosis of Chronic Pancreatitis; 4) Biomarkers of Pain and Inflammation; 5) New Approaches to the Detection of Pancreatic Cancer; and 6) Shed Exosomes, Shed Cells, and Shed Proteins. Recent advances in the fields of pancreatic imaging, functional markers of pancreatic disease, proteomics, molecular and cellular imaging, and detection of circulating cancer cells and exosomes were reviewed. Knowledge gaps and research needs were highlighted. The development of new methods for the noninvasive determination of pancreatic pathology; the use of cellular markers of pancreatic function, inflammation, pain, and malignancy; and the refinement of methods to identify cells and cellular constituents of pancreatic cancer were discussed. The further refinement of sophisticated technical methods and the need for clinical studies to validate these new approaches in large-scale studies of patients at risk for the development of pancreatic disease were repeatedly emphasized. PMID:26465948

  9. Development of highly luminescent and water-dispersible lanthanide-based nanomaterials for potential bio-medical imaging

    Science.gov (United States)

    Attanayake, Gayanthi Kumari

    Lanthanide metal ions exhibit fascinating optical and magnetic properties. Lanthanide-based nanomaterials have potential applications in optical devices, telecommunication, electroluminescent devices, bio-analytical sensors, and bio-medical imaging technology. Despite the recent developments, low luminescence characteristics, poor water solubility, and poor cell selectivity of lanthanide-based materials limit their use in bio-medical applications. This project is designed to mainly improve the luminescence properties of Eu(III)-based nanomaterials for their potential use in biomedical applications. In addition, we explore synthetic methods to enhance the water dispersibility and melanoma cell selectivity of the nanoparticles. Current research is designed to address the above mentioned drawbacks of lanthanide-based nanomaterials. Two different nanoparticle systems were developed in this project. i. europium (Eu)-based down-converting nanoparticles, ii. ytterbium (Yb)- erbium (Er)-based upconverting nanoparticles. Many down-converting nanoparticle systems suffer from low-luminescence efficiencies due to their poor light absorption by direct excitation of the lanthanide ions. In order to improve the luminescence characteristics, we have designed a novel nanomaterial by surface-coating it with organic chromophores having strong light absorption properties. LaEuF3.AEP (La=lanthanum, AEP = aminoethyl phosphate) nanoparticles were successfully synthesized using a low temperature heating method and Eu-based NaYF4 nanoparticles were synthesized using a high temperature heating method. A ligand exchange procedure was developed to functionalize the surface of the nanoparticles with an organic chromophore, TTA (thenoyltrifluoroacetone). The TTA functionalized Eu(III)-based nanoparticles exhibit impressive luminescence enhancements utilizing the sensitization effect. Poor water solubility is the main drawback of the upconverting nanoparticles for bio-medical applications. We

  10. Center for Advanced Signal and Imaging Sciences Workshop 2004

    Energy Technology Data Exchange (ETDEWEB)

    McClellan, J H; Carrano, C; Poyneer, L; Palmer, D; Baker, K; Chen, D; London, R; Weinert, G; Brase, J; Paglieroni, D; Lopez, A; Grant, C W; Wright, W; Burke, M; Miller, W O; DeTeresa, S; White, D; Toeppen, J; Haugen, P; Kamath, C; Nguyen, T; Manay, S; Newsam, S; Cantu-Paz, E; Pao, H; Chang, J; Chambers, D; Leach, R; Paulson, C; Romero, C E; Spiridon, A; Vigars, M; Welsh, P; Zumstein, J; Romero, K; Oppenheim, A; Harris, D B; Dowla, F; Brown, C G; Clark, G A; Ong, M M; Clance, T J; Kegelmeyer, l M; Benzuijen, M; Bliss, E; Burkhart, S; Conder, A; Daveler, S; Ferguson, W; Glenn, S; Liebman, J; Norton, M; Prasad, R; Salmon, T; Kegelmeyer, L M; Hafiz, O; Cheung, S; Fodor, I; Aufderheide, M B; Bary, A; Martz, Jr., H E; Burke, M W; Benson, S; Fisher, K A; Quarry, M J

    2004-11-15

    Welcome to the Eleventh Annual C.A.S.I.S. Workshop, a yearly event at the Lawrence Livermore National Laboratory, presented by the Center for Advanced Signal & Image Sciences, or CASIS, and sponsored by the LLNL Engineering Directorate. Every November for the last 10 years we have convened a diverse set of engineering and scientific talent to share their work in signal processing, imaging, communications, controls, along with associated fields of mathematics, statistics, and computing sciences. This year is no exception, with sessions in Adaptive Optics, Applied Imaging, Scientific Data Mining, Electromagnetic Image and Signal Processing, Applied Signal Processing, National Ignition Facility (NIF) Imaging, and Nondestructive Characterization.

  11. A laboratory-based X-ray phase contrast imaging scanner with applications in biomedical and non-medical disciplines

    International Nuclear Information System (INIS)

    X-ray phase contrast imaging (XPCi) provides a much higher visibility of low-absorbing details than conventional, attenuation-based radiography. This is due to the fact that image contrast is determined by the unit decrement of the real part of the complex refractive index of an object rather than by its imaginary part (the absorption coefficient), which can be up to 1000 times larger for energies in the X-ray regime. This finds applications in many areas, including medicine, biology, material testing, and homeland security. Until lately, XPCi has been restricted to synchrotron facilities due to its demanding coherence requirements on the radiation source. However, edge illumination XPCi, first developed by one of the authors at the ELETTRA Synchrotron in Italy, substantially relaxes these requirements and therefore provides options to overcome this problem. Our group has built a prototype scanner that adapts the edge-illumination concept to standard laboratory conditions and extends it to large fields of view. This is based on X-ray sources and detectors available off the shelf, and its use has led to impressive results in mammography, cartilage imaging, testing of composite materials and security inspection. This article presents the method and the scanner prototype, and reviews its applications in selected biomedical and non-medical disciplines. (author)

  12. Pacific Northwest Laboratory annual report for 1983 to the DOE Office of Energy Research. Part 1. Biomedical sciences

    International Nuclear Information System (INIS)

    This report summarizes progress on Office of Health and Environmental Research (OHER) biomedical and health effects research conducted at PNL in FY 1983 to develop the information required for a comprehensive understanding of the interaction of energy-related pollutants with living organisms. The first section is devoted to an evaluation of possible health effects among nuclear workers. The next three sections, which contain reports of health effects research in biological systems, are grouped according to the major endpoint being studied: carcinogenesis, mutagenesis, and systems damage. Since some projects have multiple objectives, a section may contain data concerning other endpoints as well. The section on carcinogenesis presents results from laboratory animal dose-effect relationship studies from both nuclear and synfuels materials. These data, along with metabolism and modeling studies, provide a basis for predicting human risks in the absence of relevant human exposure. This year we include a report on our 22nd Hanford Life Sciences Symposium, which dealt with this problem of extrapolating the results of animal studies to man. Of particular importance in carcinogenesis has been the demonstration that the carcinogenic potencies of complex organic synfuel mixtures may be much lower (or, occasionally, higher) than the sum of the potencies of the individual components. The mutagenesis section is primarily concerned with the results of microbial mutagenesis studies with synfuel materials. These studies provide valuable information on the carcinogenic potential of these complex organic mixtures. With results from studies reported in the carcinogenesis section, they are also being used to establish an adequate data base for determining the correlation between mutagenic and carcinogenic processes. Separate abstracts have been prepared for each program for inclusion in the Energy Data Base

  13. Pacific Northwest Laboratory annual report for 1983 to the DOE Office of Energy Research. Part 1. Biomedical sciences

    Energy Technology Data Exchange (ETDEWEB)

    Park, J.F.

    1984-02-01

    This report summarizes progress on Office of Health and Environmental Research (OHER) biomedical and health effects research conducted at PNL in FY 1983 to develop the information required for a comprehensive understanding of the interaction of energy-related pollutants with living organisms. The first section is devoted to an evaluation of possible health effects among nuclear workers. The next three sections, which contain reports of health effects research in biological systems, are grouped according to the major endpoint being studied: carcinogenesis, mutagenesis, and systems damage. Since some projects have multiple objectives, a section may contain data concerning other endpoints as well. The section on carcinogenesis presents results from laboratory animal dose-effect relationship studies from both nuclear and synfuels materials. These data, along with metabolism and modeling studies, provide a basis for predicting human risks in the absence of relevant human exposure. This year we include a report on our 22nd Hanford Life Sciences Symposium, which dealt with this problem of extrapolating the results of animal studies to man. Of particular importance in carcinogenesis has been the demonstration that the carcinogenic potencies of complex organic synfuel mixtures may be much lower (or, occasionally, higher) than the sum of the potencies of the individual components. The mutagenesis section is primarily concerned with the results of microbial mutagenesis studies with synfuel materials. These studies provide valuable information on the carcinogenic potential of these complex organic mixtures. With results from studies reported in the carcinogenesis section, they are also being used to establish an adequate data base for determining the correlation between mutagenic and carcinogenic processes. Separate abstracts have been prepared for each program for inclusion in the Energy Data Base.

  14. A General System for Automatic Biomedical Image Segmentation Using Intensity Neighborhoods

    Directory of Open Access Journals (Sweden)

    Cheng Chen

    2011-01-01

    Full Text Available Image segmentation is important with applications to several problems in biology and medicine. While extensively researched, generally, current segmentation methods perform adequately in the applications for which they were designed, but often require extensive modifications or calibrations before being used in a different application. We describe an approach that, with few modifications, can be used in a variety of image segmentation problems. The approach is based on a supervised learning strategy that utilizes intensity neighborhoods to assign each pixel in a test image its correct class based on training data. We describe methods for modeling rotations and variations in scales as well as a subset selection for training the classifiers. We show that the performance of our approach in tissue segmentation tasks in magnetic resonance and histopathology microscopy images, as well as nuclei segmentation from fluorescence microscopy images, is similar to or better than several algorithms specifically designed for each of these applications.

  15. Biomedical Imaging Modality Classification Using Combined Visual Features and Textual Terms

    Directory of Open Access Journals (Sweden)

    Xian-Hua Han

    2011-01-01

    extraction from medical images and fuses the different extracted visual features and textual feature for modality classification. To extract visual features from the images, we used histogram descriptor of edge, gray, or color intensity and block-based variation as global features and SIFT histogram as local feature. For textual feature of image representation, the binary histogram of some predefined vocabulary words from image captions is used. Then, we combine the different features using normalized kernel functions for SVM classification. Furthermore, for some easy misclassified modality pairs such as CT and MR or PET and NM modalities, a local classifier is used for distinguishing samples in the pair modality to improve performance. The proposed strategy is evaluated with the provided modality dataset by ImageCLEF 2010.

  16. A Novel Light Source Design for Spectral Tuning in Biomedical Imaging

    CERN Document Server

    Basu, Chandrajit; Meinhardt-Wollweber, Merve; Roth, Bernhard

    2014-01-01

    We propose a novel architecture with a remote phosphor based modular and compact light source in a non-contact dermoscope prototype for skin cancer screening. The spectrum and color temperature of the output light can easily and significantly be changed depending on spectral absorption characteristics of the tissues being imaged. The new system has several advantages compared to state-of-the-art phosphor converted ultra-bright white LEDs, used in a wide range of medical imaging devices, which have a fixed spectrum and color temperature at a given operating point. In particular, the system can more easily be adapted to the requirements originating from different tissues in the human body which have wavelength dependent absorption and reflectivity. This leads to improved contrast for different kinds of imaged tissue components. The concept of such a lighting architecture can be vastly utilized in many other medical imaging devices including endoscopic systems.

  17. Advances in biomedical imaging using THz technology with applications to burn-wound assessment

    Science.gov (United States)

    Tewari, Priyamvada; Kealey, Colin; Sung, Jun; Maccabi, Ashkan; Bajwa, Neha; Singh, Rahul; Culjat, Martin; Stojadinovic, Alexander; Grundfest, Warren; Taylor, Zachary D.

    2012-02-01

    Terahertz (THz) hydration sensing and image has been a topic of increased interest recently due largely to improvements in source and detector technology and the identification of applications where current hydration sensing techniques are insufficient. THz medical imaging is an expanding field of research and tissue hydration plays a key role in the contrast observed in THz tissue reflectance and absorbance maps. This paper outlines the most recent results in burn and corneal imaging where hydration maps were used to assess tissue status. A 3 day study was carried out in rat models where a THz imaging system was used to assess the severity and extent of burn throughout the first day of injury and at the 24, 48, and 72 hour time points. Marked difference in tissue reflectance were observed between the partial and full thickness burns and image features were identified that may be used as diagnostic markers for burn severity. Companion histological analysis performed on tissue excised on Day 3 confirms hypothesized burn severity. The results of these preliminary animal trials suggest that THz imaging may be useful in burn wound assessment where current clinical modalities have resolution and/or sensitivity insufficient for accurate diagnostics.

  18. High Throughput Multispectral Image Processing with Applications in Food Science

    OpenAIRE

    Tsakanikas, Panagiotis; Pavlidis, Dimitris; Nychas, George-John

    2015-01-01

    Recently, machine vision is gaining attention in food science as well as in food industry concerning food quality assessment and monitoring. Into the framework of implementation of Process Analytical Technology (PAT) in the food industry, image processing can be used not only in estimation and even prediction of food quality but also in detection of adulteration. Towards these applications on food science, we present here a novel methodology for automated image analysis of several kinds of fo...

  19. A game-based crowdsourcing platform for rapidly training middle and high school students to perform biomedical image analysis

    Science.gov (United States)

    Feng, Steve; Woo, Min-jae; Kim, Hannah; Kim, Eunso; Ki, Sojung; Shao, Lei; Ozcan, Aydogan

    2016-03-01

    We developed an easy-to-use and widely accessible crowd-sourcing tool for rapidly training humans to perform biomedical image diagnostic tasks and demonstrated this platform's ability on middle and high school students in South Korea to diagnose malaria infected red-blood-cells (RBCs) using Giemsa-stained thin blood smears imaged under light microscopes. We previously used the same platform (i.e., BioGames) to crowd-source diagnostics of individual RBC images, marking them as malaria positive (infected), negative (uninfected), or questionable (insufficient information for a reliable diagnosis). Using a custom-developed statistical framework, we combined the diagnoses from both expert diagnosticians and the minimally trained human crowd to generate a gold standard library of malaria-infection labels for RBCs. Using this library of labels, we developed a web-based training and educational toolset that provides a quantified score for diagnosticians/users to compare their performance against their peers and view misdiagnosed cells. We have since demonstrated the ability of this platform to quickly train humans without prior training to reach high diagnostic accuracy as compared to expert diagnosticians. Our initial trial group of 55 middle and high school students has collectively played more than 170 hours, each demonstrating significant improvements after only 3 hours of training games, with diagnostic scores that match expert diagnosticians'. Next, through a national-scale educational outreach program in South Korea we recruited >1660 students who demonstrated a similar performance level after 5 hours of training. We plan to further demonstrate this tool's effectiveness for other diagnostic tasks involving image labeling and aim to provide an easily-accessible and quickly adaptable framework for online training of new diagnosticians.

  20. Automated hexahedral mesh generation from biomedical image data: applications in limb prosthetics.

    Science.gov (United States)

    Zachariah, S G; Sanders, J E; Turkiyyah, G M

    1996-06-01

    A general method to generate hexahedral meshes for finite element analysis of residual limbs and similar biomedical geometries is presented. The method utilizes skeleton-based subdivision of cross-sectional domains to produce simple subdomains in which structured meshes are easily generated. Application to a below-knee residual limb and external prosthetic socket is described. The residual limb was modeled as consisting of bones, soft tissue, and skin. The prosthetic socket model comprised a socket wall with an inner liner. The geometries of these structures were defined using axial cross-sectional contour data from X-ray computed tomography, optical scanning, and mechanical surface digitization. A tubular surface representation, using B-splines to define the directrix and generator, is shown to be convenient for definition of the structure geometries. Conversion of cross-sectional data to the compact tubular surface representation is direct, and the analytical representation simplifies geometric querying and numerical optimization within the mesh generation algorithms. The element meshes remain geometrically accurate since boundary nodes are constrained to lie on the tubular surfaces. Several element meshes of increasing mesh density were generated for two residual limbs and prosthetic sockets. Convergence testing demonstrated that approximately 19 elements are required along a circumference of the residual limb surface for a simple linear elastic model. A model with the fibula absent compared with the same geometry with the fibula present showed differences suggesting higher distal stresses in the absence of the fibula. Automated hexahedral mesh generation algorithms for sliced data represent an advancement in prosthetic stress analysis since they allow rapid modeling of any given residual limb and optimization of mesh parameters.

  1. Comparison of no-prior and soft-prior regularization in biomedical microwave imaging

    Directory of Open Access Journals (Sweden)

    Amir H Golnabi

    2011-01-01

    Full Text Available Microwave imaging for medical applications is attractive because the range of dielectric properties of different soft tissues can be substantial. Breast cancer detection and monitoring of treatment response are areas where this technology could be important because of the contrast between normal and malignant tissue. Unfortunately, the technique is unable to achieve the high spatial resolution at depth in tissue which is available from other conventional modalities such as x-ray computed tomography (CT or magnetic resonance imaging (MRI. We have incorporated a soft-prior regularization strategy within our microwave reconstruction algorithm and compared it with the images obtained with traditional no-prior (Levenberg-Marquardt regularization. Initial simulation and phantom results show a significant improvement of the recovered electrical properties. Specifically, errors in the microwave property estimates were improved by as much as 95%. The effects of a false-inclusion region were also evaluated and the results show that a small residual property bias of 6% in permittivity and 15% in conductivity can occur that does not otherwise degrade the property recovery accuracy of inclusions that actually exist. The work sets the stage for integrating microwave imaging with MR for improved resolution and functional imaging of the breast in the future.

  2. Do Physicians Make Their Articles Readable for Their Blind or Low-Vision Patients? An Analysis of Current Image Processing Practices in Biomedical Journals from the Point of View of Accessibility

    OpenAIRE

    Splendiani, Bruno; Ribera, Mireia; Garcia, Roberto; Termens, Miquel

    2014-01-01

    Visual content in biomedical academic papers is a growing source of critical information, but it is not always fully readable for people with visual impairments. We aimed to assess current image processing practices, accessibility policies, and submission policies in a sample of 12 highly cited biomedical journals. We manually checked the application of text-based alternative image descriptions for every image in 12 articles (one for each journal). We determined whether the journals claimed t...

  3. Pacific Northwest Laboratory annual report for 1983 to the DOE Office of Energy Research. Part 1. Biomedical sciences

    International Nuclear Information System (INIS)

    Biomedical and health effects research conducted at PNL in 1982 on the evaluation of risk to man from existing and/or developing energy-related technologies are described. Most of the studies described in this report relate to activities for three major energy technologies: nuclear fuel cycle; fossil fuel cycle (oil, gas, and coal process technologies, mining, and utilization; synfuel development), and fudion (biomagnetic effects). The report is organized under these technologies. In addition, research reports are included on the application of nuclear energy to biomedical problems. Individual projects are indexed separately

  4. Pacific Northwest Laboratory annual report for 1983 to the DOE Office of Energy Research. Part 1. Biomedical sciences

    Energy Technology Data Exchange (ETDEWEB)

    Drucker, H.

    1983-02-01

    Biomedical and health effects research conducted at PNL in 1982 on the evaluation of risk to man from existing and/or developing energy-related technologies are described. Most of the studies described in this report relate to activities for three major energy technologies: nuclear fuel cycle; fossil fuel cycle (oil, gas, and coal process technologies, mining, and utilization; synfuel development), and fudion (biomagnetic effects). The report is organized under these technologies. In addition, research reports are included on the application of nuclear energy to biomedical problems. Individual projects are indexed separately.

  5. Molecular image in biomedical research. Molecular imaging unit of the National Cancer Research Center; Imagen molecular an investigation biomedica. La Unidad de Imagen Molecular del Centro Nacional de Investigaciones Oncologicas

    Energy Technology Data Exchange (ETDEWEB)

    Perez Bruzon, J.; Mulero Anhiorte, F.

    2010-07-01

    This article has two basic objectives. firstly, it will review briefly the most important imaging techniques used in biomedical research indicting the most significant aspects related to their application in the preclinical stage. Secondly, it will present a practical application of these techniques in a pure biomedical research centre (not associated to a clinical facility). Practical aspects such as organisation, equipment, work norms, shielding of the Spanish National Cancer Research Centre (CNIO) Imaging Unit will be shown. This is a pioneering facility in the application of these techniques in research centres without any dependence or any direct relationship with other hospital Nuclear Medicine services. (Author) 7 refs.

  6. Against negative image of science: history of science in the physics & chemistry Education

    OpenAIRE

    Solbes Matarredona, Jordi; Traver i Ribes, Manel Josep

    2003-01-01

    Abstract. After a first approach to analyze which is today¿s status of the history of science in high school Physics and Chemistry classes, we attempt to demonstrate that an appropriate introduction of several aspects of History and Sociology of Science in our classes can operate a significant improvement in pupils¿ image and attitudes in science and science teaching. We will show that several groups of pupils from 15 to 17 can improve significantly their interest in science after at least a ...

  7. Biomedical imaging and therapy with physically and physiologically tailored magnetic nanoparticles

    Science.gov (United States)

    Khandhar, Amit Praful

    Magnetic particle imaging (MPI) and magnetic fluid hyperthermia (MFH) are emerging imaging and therapy approaches that have the potential to improve diagnostic safety and disease management of heart disease and cancer - the number 1 and 2 leading causes of deaths in the United States. MPI promises real-time, tomographic and quantitative imaging of superparamagnetic iron oxide nanoparticle (SPION) tracers distributed in vivo, and is targeted to offer a safer angiography alternative for its first clinical application. MFH uses ac-fields to dissipate heat from SPIONs that can be delivered locally to promote hyperthermia therapy (~42°C) in cancer cells. Both technologies use safe radiofrequency magnetic fields to exploit the fundamental magnetic relaxation properties of superparamagnetic iron oxide nanoparticles (SPIONs), which must be tailored for optimal imaging in the case of MPI, and maximum hyperthermia potency in the case of MFH. Furthermore, the magnetic core and shell of SPIONs are both central to the optimization process; the shell, in particular, bridges the translational gap between the optimized core and its safe and effective use in the physiological environment. Unfortunately, existing SPIONs that were originally designed as MRI contrast agents lack the basic physical properties that enable the clinical translation of MPI and MFH. In this work, the core and shell of monodisperse SPIONs were optimized in concert to accomplish two equally important objectives: (1) biocompatibility, and (2) MPI and MFH efficacy of SPIONs in physiological environments. Critically, it was found that the physical and physiological responses of SPIONs are coupled, and impacting one can have consequences on the other. It was shown that the poly(ethylene glycol) (PEG)-based shell when properly optimized reduced protein adsorption to SPION surface and phagocytic uptake in macrophages - both prerequisites for designing long-circulating SPIONs. In MPI, tailoring the surface coating

  8. Application of cone beam computed tomography in facial imaging science

    Institute of Scientific and Technical Information of China (English)

    Zacharias Fourie; Janalt Damstra; Yijin Ren

    2012-01-01

    The use of three-dimensional (3D) methods for facial imaging has increased significantly over the past years.Traditional 2D imaging has gradually being replaced by 3D images in different disciplines,particularly in the fields of orthodontics,maxillofacial surgery,plastic and reconstructive surgery,neurosurgery and forensic sciences.In most cases,3D facial imaging overcomes the limitations of traditional 2D methods and provides the clinician with more accurate information regarding the soft-tissues and the underlying skeleton.The aim of this study was to review the types of imaging methods used for facial imaging.It is important to realize the difference between the types of 3D imaging methods as application and indications thereof may differ.Since 3D cone beam computed tomography (CBCT) imaging will play an increasingly importanl role in orthodontics and orthognathic surgery,special emphasis should be placed on discussing CBCT applications in facial evaluations.

  9. Bevalac biomedical facility

    International Nuclear Information System (INIS)

    This paper describes the physical layout of the Bevalac Facility and the research programs carried out at the facility. Beam time on the Bevalac is divided between two disciplines: one-third for biomedical research and two-thirds for nuclear science studies. The remainder of the paper discusses the beam delivery system including dosimetry, beam sharing and beam scanning

  10. Signal and imaging sciences workshop. Proceedings

    International Nuclear Information System (INIS)

    Papers are presented in the areas of: Medical Technologies; Non-Destructive Evaluation; Applications of Signal/Image Processing; Laser Guide Star and Adaptive Optics; Computational Electromagnetic, Acoustics and Optics; Micro-Impulse Radar Processing; Optical Applications; TANGO Space Shuttle

  11. Signal and imaging sciences workshop proceedings

    Energy Technology Data Exchange (ETDEWEB)

    Candy, J.V.

    1997-11-01

    Papers are presented in the areas of: Medical Technologies; Non-Destructive Evaluation; Applications of Signal/Image Processing; Laser Guide Star and Adaptive Optics; Computational Electromagnetic, Acoustics and Optics; Micro-Impulse Radar Processing; Optical Applications; TANGO Space Shuttle.

  12. Nanodiamonds as novel nanomaterials for biomedical applications: drug delivery and imaging systems

    Directory of Open Access Journals (Sweden)

    Kaur R

    2013-01-01

    Full Text Available Randeep Kaur, Ildiko BadeaDrug Design and Discovery Research Group, College of Pharmacy and Nutrition, University of Saskatchewan, Saskatoon, Saskatchewan, CanadaAbstract: Detonation nanodiamonds (NDs are emerging as delivery vehicles for small chemical drugs and macromolecular biotechnology products due to their primary particle size of 4 to 5 nm, stable inert core, reactive surface, and ability to form hydrogels. Nanoprobe technology capitalizes on the intrinsic fluorescence, high refractive index, and unique Raman signal of the NDs, rendering them attractive for in vitro and in vivo imaging applications. This review provides a brief introduction of the various types of NDs and describes the development of procedures that have led to stable single-digit-sized ND dispersions, a crucial feature for drug delivery systems and nanoprobes. Various approaches used for functionalizing the surface of NDs are highlighted, along with a discussion of their biocompatibility status. The utilization of NDs to provide sustained release and improve the dispersion of hydrophobic molecules, of which chemotherapeutic drugs are the most investigated, is described. The prospects of improving the intracellular delivery of nucleic acids by using NDs as a platform are exemplified. The photoluminescent and optical scattering properties of NDs, together with their applications in cellular labeling, are also reviewed. Considering the progress that has been made in understanding the properties of NDs, they can be envisioned as highly efficient drug delivery and imaging biomaterials for use in animals and humans.Keywords: dispersion, surface functionalization, toxicity, carriers, fluorescence, light scattering

  13. Magnetic resonance imaging in Malawi: contributions to clinical care, medical education and biomedical research.

    Science.gov (United States)

    Potchen, M J; Kampondeni, S; Birbeck, G L; Hammond, C A; Gonani, A; Phiri, K S; Seydel, K B; Taylors, T E

    2011-06-01

    Advanced medical imaging technologies are generally unavailable in low income, tropical settings despite the reality that neurologic disorders are disproportionately common in such environments. Through a series of donations as well as extramural research funding support, an MRI facility opened in Blantyre, Malawi in July 2008. Resulting opportunities for studying common tropical disorders, such as malaria and schistosomiasis, in vivo are promising. The subsequent improvements in local patient care were expected and exceptional and include major revisions in basic care protocols that may eventually impact care protocols at facilities in the region that do not have recourse to MRI. In addition, advanced neuroimaging technology has energized the medical education system, possibly slowing the brain drain. Advanced technologies, though potentially associated with significant fiscal opportunity costs, may bring unexpected and extensive benefits to the healthcare and medical education systems involved.

  14. A purification system for 64Cu produced by a biomedical cyclotron for antibody PET imaging

    International Nuclear Information System (INIS)

    Ion exchange is a simple and efficient method for separating no-carrier-added 64Cu from an irradiated Ni target. We developed a semi-automated two-round 64Cu separation system equipped with a strong-base anion exchange resin column. We first verified the efficiency of the system using a non-radioactive substitute consisting of 25 mg of Ni and 127 ng of Cu, and confirmed that Cu was completely eluted at the second round of the separation step. After the bombardment, separation of 64Cu from the Ni target was achieved with high radiochemical purity. 64Cu produced and separated in this study had an extremely low level of Ni impurity. It could be used for labeling monoclonal antibodies for antibody positron emission tomography imaging and synthesizing radiopharmaceuticals. (author)

  15. Science and Different Images of the World

    Directory of Open Access Journals (Sweden)

    Michele Marsonet

    2016-07-01

    They are both intersubjective and non arbitrary. What are, however, these two images, and are they really alternative? Let us note, from the onset, that the two images we just mentioned are both idealizations in the same sense of Max Weber’s “ideal types”. This means that, in order to discover their actual presence, we need having recourse to a good deal of philosophical abstraction. In other words, they are not disclosed by mere empirical recognition. For instance, we live in the commonsense view of the world, and only a complex process of reflection makes us understand that we, as human beings, share a common view of the world, which is in turn determined by the fact that our physical structure bounds us to conceive of reality in a certain way rather than in another. Think about the importance that light, for example, has not only in daily life, but even in our philosophical conceptualization of the world. The story is complicated by the fact that each image has a history, and while the manifest image dates back to pre-history, the scientific image is constantly changing shape.

  16. Multimission image processing and science data visualization

    Science.gov (United States)

    Green, William B.

    1993-01-01

    The Operational Science Analysis (OSA) Functional area supports science instrument data display, analysis, visualization and photo processing in support of flight operations of planetary spacecraft managed by the Jet Propulsion Laboratory (JPL). This paper describes the data products generated by the OSA functional area, and the current computer system used to generate these data products. The objectives on a system upgrade now in process are described. The design approach to development of the new system are reviewed, including use of the Unix operating system and X-Window display standards to provide platform independence, portability, and modularity within the new system, is reviewed. The new system should provide a modular and scaleable capability supporting a variety of future missions at JPL.

  17. The imaging science of positron emission tomography

    International Nuclear Information System (INIS)

    To meet the goals of converging molecular imaging with molecular biology and molecular medicine, there is a need to define the strategy and structure for perfecting the accuracy of functional images derived using PET. This also relates directly to how clinical research, diagnostic questions and challenges from the pharmaceutical industry are addressed. In order to exploit the sensitivity and specificity of PET, an integrated, multidisciplinary approach is imperative. The structure to provide this needs to been seen in the context of an institutional approach, collaborations within the academic and industrial sectors and the funding needed to meet the challenges of addressing difficult questions. (orig.)

  18. Information Science Panel joint meeting with Imaging Science Panel

    Science.gov (United States)

    1982-01-01

    Specific activity in information extraction science (taken to include data handling) is needed to: help identify the bounds of practical missions; identify potential data handling and analysis scenarios; identify the required enabling technology; and identify the requirements for a design data base to be used by the disciplines in determining potential parameters for future missions. It was defined that specific analysis topics were a function of the discipline involved, and therefore no attempt was made to define any specific analysis developments required. Rather, it was recognized that a number of generic data handling requirements exist whose solutions cannot be typically supported by the disciplines. The areas of concern were therefore defined as: data handling aspects of system design considerations; enabling technology for data handling, with specific attention to rectification and registration; and enabling technology for analysis. Within each of these areas, the following topics were addressed: state of the art (current status and contributing factors); critical issues; and recommendations for research and/or development.

  19. Synthesis of bifunctional Gd2O3:Eu3+nanocrystals and their applications in biomedical imaging

    Institute of Scientific and Technical Information of China (English)

    吴燕利; 徐贤柱; 李倩兰; 阳如春; 丁海新; 肖强

    2015-01-01

    Ultrafine Gd2O3:Eu3+nanocrystals were successfully prepared by a simple reverse microemulsion method and subsequent calcination. Their structural, optical and magnetic properties were investigated using scanning electron microscopy (SEM), transmis-sion electron microscopy (TEM), X-ray diffraction (XRD), Fourier transform infrared (FTIR), photoluminescence (PL), and magnetic property measurement system (MPMS). The amorphous Gd2(CO3)3:Eu3+colloidal spheres were proved as an intermediate product, and gradually transformed into crystallized Gd2O3:Eu3+with average diameter less than 100 nm. The paramagnetic property of the synthesized Gd2O3:Eu3+nanocrystals were confirmed with its linear hysteresis plot (M-H). And Gd2O3:Eu3+nanocrystals showed high contrast T1-enhancing modality due to the presence of the Gd3+ ions onto the particle surface. In addition, the application of the Gd2O3:Eu3+nanocrystals as biotag for cell labeling was reported, red fluorescence from Eu3+ions observed by fluorescence micros-copy showed that the nanocrystals could permeate the cell membrane. Cytotoxicity studies of the Gd2O3:Eu3+nanocrystals showed no adverse effect on cell viability, evidencing their high biological compatibility. Therefore, the nanoprobe formed from Gd2O3:Eu3+nanocrystals provided the dual modality of optical and magnetic resonance imaging.

  20. Structure-coupled multiphysics imaging in geophysical sciences

    Science.gov (United States)

    Gallardo, Luis A.; Meju, Max A.

    2011-03-01

    Multiphysics imaging or data inversion is of growing importance in many branches of science and engineering. In geophysical sciences, there is a need for combining information from multiple images acquired using different imaging devices and/or modalities because of the potential for accurate predictions. The major challenges are how to combine disparate data from unrelated physical phenomena, taking into account the different spatial scales of the measurement devices, model complexities, and how to quantify the associated uncertainties. This review paper summarizes the role played by the structural gradients-based approach for coupling fundamentally different physical fields in (mainly) geophysical inversion, develops further understanding of this approach to guide newcomers to the field, and defines the main challenges and directions for future research that may be useful in other fields of science and engineering.

  1. NASA IMAGESEER: NASA IMAGEs for Science, Education, Experimentation and Research

    Science.gov (United States)

    Le Moigne, Jacqueline; Grubb, Thomas G.; Milner, Barbara C.

    2012-01-01

    A number of web-accessible databases, including medical, military or other image data, offer universities and other users the ability to teach or research new Image Processing techniques on relevant and well-documented data. However, NASA images have traditionally been difficult for researchers to find, are often only available in hard-to-use formats, and do not always provide sufficient context and background for a non-NASA Scientist user to understand their content. The new IMAGESEER (IMAGEs for Science, Education, Experimentation and Research) database seeks to address these issues. Through a graphically-rich web site for browsing and downloading all of the selected datasets, benchmarks, and tutorials, IMAGESEER provides a widely accessible database of NASA-centric, easy to read, image data for teaching or validating new Image Processing algorithms. As such, IMAGESEER fosters collaboration between NASA and research organizations while simultaneously encouraging development of new and enhanced Image Processing algorithms. The first prototype includes a representative sampling of NASA multispectral and hyperspectral images from several Earth Science instruments, along with a few small tutorials. Image processing techniques are currently represented with cloud detection, image registration, and map cover/classification. For each technique, corresponding data are selected from four different geographic regions, i.e., mountains, urban, water coastal, and agriculture areas. Satellite images have been collected from several instruments - Landsat-5 and -7 Thematic Mappers, Earth Observing-1 (EO-1) Advanced Land Imager (ALI) and Hyperion, and the Moderate Resolution Imaging Spectroradiometer (MODIS). After geo-registration, these images are available in simple common formats such as GeoTIFF and raw formats, along with associated benchmark data.

  2. Imaging Spectroscopy Instrumentation for Earth Science and Solar System Exploration

    Science.gov (United States)

    Green, Robert; Vane, Gregg

    2016-07-01

    Spectroscopy is a powerful analytical method based in physics that is used to investigate questions and test hypotheses across an extraordinary range of scientific disciplines as well as for quantitative applications. In the late 1970's the concept for an instrument that measured spectra for every point in an image was conceived and proposed using the most advanced infrared detector array available at the time. The Airborne Imaging Spectrometer as developed and first flew in 1982. New discoveries were made with the first flights of this instrument. Since that time increasingly advanced airborne and space imaging spectrometer have been developed and deployed. These instruments have been used for science and applications on Earth and for science and exploration throughout the solar system. This talk presents the advances in imaging spectrometer instrumentation and key discoveries of imaging spectrometers for Earth and elsewhere in our solar system. It also presents examples of new imaging spectrometer architectures enabled by new detectors and spectrometer design forms as well as some of the science and applications objectives that can be pursued ranging 50 micron spatial imaging for planetary surface rovers to spectroscopic instruments measuring exoplanet composition and structure.

  3. Materials science with SR using x-ray imaging

    International Nuclear Information System (INIS)

    Some examples of applications of synchrotron radiation to materials science demonstrate the importance of microstructure information within structural as well as functional materials in order to control their properties and quality as designed for industrial purposes. To collect such information, x-ray imaging in quasi real time is required in either the microradiographic mode or the diffraction (in transmission) mode. New measurement technologies based on imaging are applied to polycrystalline materials, single crystal materials and multilayered device materials to illustrate what kind of synchrotron radiation facility is most desirable for materials science and engineering. (author)

  4. Mass spectrometry imaging: applications to food science.

    Science.gov (United States)

    Taira, Shu; Uematsu, Kohei; Kaneko, Daisaku; Katano, Hajime

    2014-01-01

    Two-dimensional mass spectrometry (MS) analysis of biological samples by means of what is called MS imaging (MSI) is now being used to analyze analyte distribution because it facilitates determination of the existence (what is it?) and localization (where is it?) of biomolecules. Reconstruction of mass image by target signal is given after two-dimensional MS measurements on a sample section. From only one section, we can understand the existence and localization of many molecules without the need of an antibody or fluorescent reagent. In this review, we introduce the analysis of localization of functional constituents and nutrients in herbal medicine products via MSI. The ginsenosides were mainly distributed in the periderm and the tip region of the root of Panax ginseng. The capsaicin was found to be more dominantly localized in the placenta than the pericarp and seed in Capsicum fruits. We expect MSI will be a useful technique for optical quality assurance.

  5. Imaging Sciences Workshop, Proceedings, November 15-16, 1995

    Energy Technology Data Exchange (ETDEWEB)

    Candy, J.V.

    1995-11-01

    Welcome to the Imaging Sciences Workshop sponsored by C.A.S.I.S., the Center for Advanced Signal & Image Sciences. Many programs at LLNL use advanced signal and image processing techniques, and the Center was established to encourage the exchange of ideas and to promote collaboration by individuals from these programs. This Workshop is an opportunity for LLNL personnel and invited speakers from other organizations not only to present new work, but, perhaps more importantly, to discuss problems in an informal and friendly setting. This year marks the opening of the CASIS Reference Library in Building 272, and we encourage all attendees to stop by for a look and to make use of it in the future. The Technical Program covers a wide variety of applications at LLNL including physical systems for collecting data and processing techniques for recovering and enhancing images. We hope that you enjoy the presentations, and we encourage you to participate in the discussions. Thanks for attending.

  6. Anatomy for Biomedical Engineers

    Science.gov (United States)

    Carmichael, Stephen W.; Robb, Richard A.

    2008-01-01

    There is a perceived need for anatomy instruction for graduate students enrolled in a biomedical engineering program. This appeared especially important for students interested in and using medical images. These students typically did not have a strong background in biology. The authors arranged for students to dissect regions of the body that…

  7. Cassini Imaging Science: Initial Results on Phoebe and Iapetus

    OpenAIRE

    Porco, C. C.; Dyudina, U.; Ingersoll, A. P.

    2005-01-01

    The Cassini Imaging Science Subsystem acquired high-resolution imaging data on the outer Saturnian moon, Phoebe, during Cassini's close flyby on 11 June 2004 and on Iapetus during a flyby on 31 December 2004. Phoebe has a heavily cratered and ancient surface, shows evidence of ice near the surface, has distinct layering of different materials, and has a mean density that is indicative of an ice-rock mixture. Iapetus's dark leading side (Cassini Regio) is ancient, heavily cratered terrain bise...

  8. Telemedicine optoelectronic biomedical data processing system

    Science.gov (United States)

    Prosolovska, Vita V.

    2010-08-01

    The telemedicine optoelectronic biomedical data processing system is created to share medical information for the control of health rights and timely and rapid response to crisis. The system includes the main blocks: bioprocessor, analog-digital converter biomedical images, optoelectronic module for image processing, optoelectronic module for parallel recording and storage of biomedical imaging and matrix screen display of biomedical images. Rated temporal characteristics of the blocks defined by a particular triggering optoelectronic couple in analog-digital converters and time imaging for matrix screen. The element base for hardware implementation of the developed matrix screen is integrated optoelectronic couples produced by selective epitaxy.

  9. How to display science since images have no mass

    CERN Document Server

    Chevrier, Joel; Marchi, Florence; Jones, Gail

    2011-01-01

    Education, science, in fact the whole society, extensively use images. Between us and the world are the visual displays. Screens, small and large, individual or not, are everywhere. Images are increasingly the 2D substrate of our virtual interaction with reality. However images will never support a complete representation of the reality. Three-dimensional representations will not change that. Images are primarily a spatial representation of our world dedicated to our sight. Key aspects such as energy and the associated forces are not spatially materialized. In classical physics, interaction description is based on Newton equations with trajectory and force as the dual central concepts. Images can in real time show all aspects of trajectories but not the associated dynamical aspects described by forces and energies. Contrary to the real world, the world of images opposes no constrain, nor resistance to our actions. Only the physical quantities, that do not contain mass in their dimension can be satisfactory re...

  10. Magnetosphere imager science definition team interim report

    Science.gov (United States)

    Armstrong, T. P.; Johnson, C. L.

    1995-01-01

    For three decades, magnetospheric field and plasma measurements have been made by diverse instruments flown on spacecraft in may different orbits, widely separated in space and time, and under various solar and magnetospheric conditions. Scientists have used this information to piece together an intricate, yet incomplete view of the magnetosphere. A simultaneous global view, using various light wavelengths and energetic neutral atoms, could reveal exciting new data nd help explain complex magnetospheric processes, thus providing a clear picture of this region of space. This report documents the scientific rational for such a magnetospheric imaging mission and provides a mission concept for its implementation.

  11. Magnetosphere imager science definition team: Executive summary

    Science.gov (United States)

    Armstrong, T. P.; Gallagher, D. L.; Johnson, C. L.

    1995-01-01

    For three decades, magnetospheric field and plasma measurements have been made by diverse instruments flown on spacecraft in many different orbits, widely separated in space and time, and under various solar and magnetospheric conditions. Scientists have used this information to piece together an intricate, yet incomplete view of the magnetosphere. A simultaneous global view, using various light wavelengths and energetic neutral atoms, could reveal exciting new data and help explain complex magnetospheric processes, thus providing a clear picture of this region of space. This report summarizes the scientific rationale for such a magnetospheric imaging mission and outlines a mission concept for its implementation.

  12. Advances in biomedical engineering

    CERN Document Server

    Brown, J H U

    1973-01-01

    Advances in Biomedical Engineering, Volume 2, is a collection of papers that discusses the basic sciences, the applied sciences of engineering, the medical sciences, and the delivery of health services. One paper discusses the models of adrenal cortical control, including the secretion and metabolism of cortisol (the controlled process), as well as the initiation and modulation of secretion of ACTH (the controller). Another paper discusses hospital computer systems-application problems, objective evaluation of technology, and multiple pathways for future hospital computer applications. The pos

  13. Biomedical photonics handbook biomedical diagnostics

    CERN Document Server

    Vo-Dinh, Tuan

    2014-01-01

    Shaped by Quantum Theory, Technology, and the Genomics RevolutionThe integration of photonics, electronics, biomaterials, and nanotechnology holds great promise for the future of medicine. This topic has recently experienced an explosive growth due to the noninvasive or minimally invasive nature and the cost-effectiveness of photonic modalities in medical diagnostics and therapy. The second edition of the Biomedical Photonics Handbook presents fundamental developments as well as important applications of biomedical photonics of interest to scientists, engineers, manufacturers, teachers, studen

  14. Applications of magnetic resonance imaging in food science.

    Science.gov (United States)

    Schmidt, S J; Sun, X; Litchfield, J B

    1996-04-01

    The physical and chemical changes that occur in foods during growth, harvest, processing, storage, preparation, and consumption are often very difficult to measure and quantify. Magnetic resonance imaging (MRI) is a pioneering technology, originally developed in the medical field, that is now being used in a large number of disciplines to study a wide variety of materials and processes. In food science, MRI techniques allow the interior of foods to be imaged noninvasively and nondestructively. These images can then be quantified to yield information about several processes and material properties, such as mass and heat transfer, fat and ice crystallization, gelation, water mobidity, composition and volume changes, food stability and maturation, flow behavior, and temperature. This article introduces the fundamental principles of MRI, presents some of the recent advances in MRI technology, and reviews some of the current applications of MRI in food science research.

  15. NASA Imaging for Safety, Science, and History

    Science.gov (United States)

    Grubbs, Rodney; Lindblom, Walt; Bowerman, Deborah S. (Technical Monitor)

    2002-01-01

    Since its creation in 1958 NASA has been making and documenting history, both on Earth and in space. To complete its missions NASA has long relied on still and motion imagery to document spacecraft performance, see what can't be seen by the naked eye, and enhance the safety of astronauts and expensive equipment. Today, NASA is working to take advantage of new digital imagery technologies and techniques to make its missions more safe and efficient. An HDTV camera was on-board the International Space Station from early August, to mid-December, 2001. HDTV cameras previously flown have had degradation in the CCD during the short duration of a Space Shuttle flight. Initial performance assessment of the CCD during the first-ever long duration space flight of a HDTV camera and earlier flights is discussed. Recent Space Shuttle launches have been documented with HDTV cameras and new long lenses giving clarity never before seen with video. Examples and comparisons will be illustrated between HD, highspeed film, and analog video of these launches and other NASA tests. Other uses of HDTV where image quality is of crucial importance will also be featured.

  16. Optical Waveguide Sensing and Imaging

    CERN Document Server

    Bock, Wojtek J; Tanev, Stoyan

    2008-01-01

    The book explores various aspects of existing and emerging fiber and waveguide optics sensing and imaging technologies including recent advances in nanobiophotonics. The focus is both on fundamental and applied research as well as on applications in civil engineering, biomedical sciences, environment, security and defence. The main goal of the multi-disciplinarry team of Editors was to provide an useful reference of state-of-the-art overviews covering a variety of complementary topics on the interface of engineering and biomedical sciences.

  17. Prototyping a Global Soft X-ray Imaging Instrument for Heliophysics, Planetary Science, and Astrophysics Science

    Science.gov (United States)

    Collier, Michael R.; Porter, F. Scott; Sibeck, David G.; Carter, Jenny A.; Chiao, Meng P.; Chornay, Dennis J.; Cravens, Thomas; Galeazzi, Massimiliano; Keller, John W.; Koutroumpa, Dimitra; Kuntz, Kip; Read, Any M.; Robertson, Ina P.; Sembay, Steve; Snowden, Steven; Thomas, Nick

    2012-01-01

    We describe current progress in the development of a prototype wide field-of-view soft X-ray imager that employs Lobster-eye optics and targets heliophysics, planetary, and astrophysics science. The prototype will provide proof-of-concept for a future flight instrument capable of imaging the entire dayside magnetosheath from outside the magnetosphere. Such an instrument was proposed for the FSA AXIOM mission

  18. Prototyping a Global Soft X-Ray Imaging Instrument for Heliophysics, Planetary Science, and Astrophysics Science

    Science.gov (United States)

    Collier, M. R.; Porter, F. S.; Sibeck, D. G.; Carter, J. A.; Chiao, M. P.; Chornay, D. J.; Cravens, T.; Galeazzi, M.; Keller, J. W.; Koutroumpa, D.; Kuntz, K.; Read, A. M.; Robertson, I. P.; Sembay, S.; Snowden, S.; Thomas, N.

    2012-01-01

    We describe current progress in the development of a prototype wide field-of-view soft X-ray imager that employs Lobstereye optics and targets heliophysics, planetary, and astrophysics science. The prototype will provide proof-of-concept for a future flight instrument capable of imaging the entire dayside magnetosheath from outside the magnetosphere. Such an instrument was proposed for the ESA AXIOM mission.

  19. Grants for Science Education 1997. Including Grants for Research Resources in the United States and for Biomedical Scientists Abroad.

    Science.gov (United States)

    Howard Hughes Medical Inst., Chevy Chase, MD. Office of Grants and Special Programs.

    The data presented in this document provide information about those individuals and organizations that received funding from the Howard Hughes Medical Institute in 1997. Following a description of the Howard Hughes Medical Institute programs, details on the funding of graduate science education, undergraduate biological sciences education,…

  20. Los Alamos Life Sciences Division's biomedical and environmental research programs. Progress report, January-December 1980

    Energy Technology Data Exchange (ETDEWEB)

    Holland, L.M.; Stafford, C.G.; Bolen, S.K. (comps.)

    1981-09-01

    Highlights of research progress accomplished in the Life Sciences Division during the year ending December 1980 are summarized. Reports from the following groups are included: Toxicology, Biophysics, Genetics; Environmental Pathology, Organic Chemistry, and Environmental Sciences. Individual abstracts have been prepared for 46 items for inclusion in the Energy Data Base. (RJC)

  1. Pacific Northwest Laboratory annual report for 1988 to the DOE Office of Energy Research: Part 1, Biomedical Sciences

    Energy Technology Data Exchange (ETDEWEB)

    Park, J.F.

    1989-06-01

    This report summarizes progress on OHER biomedical and health-effects research conducted at PNL in FY 1988. The research develops the knowledge and scientific principles necessary to identify, understand, and anticipate the long-term health consequences of energy-related radiation and chemicals. Our continuing emphasis is to decrease the uncertainty of health-effects risk estimates from existing and/or developing energy-related technologies through an increased understanding of how radiation and chemicals cause health effects. The report is arranged to reflect PNL research relative to OHER programmatic structure. The first section, on human health effects, concerns statistical and epidemiological studies for assessing health risks. The next section, which contains reports of health-effects research in biological systems, includes research with radiation and chemicals.

  2. Pacific Northwest Laboratory: Annual report for 1986 to the DOE Office of Energy Research: Part 1, Biomedical sciences

    Energy Technology Data Exchange (ETDEWEB)

    Park, J.F.

    1987-02-01

    This report summarizes progress on OHER biomedical and health-effects research conducted at PNL in FY 1986. The research develops the knowledge and scientific principles necessary to identify, understand and anticipate the long-term health consequences of energy-related radiation and chemicals. Our continuing emphasis is to decrease the uncertainty of health-effects risk estimates from existing and/or developing energy-related technologies through an increased understanding of how radiation and chemicals cause health effects. The report is arranged to reflect the PNL research relative to OHER programmatic structure. The first section, on human health effects, concerns statistical and epidemiological methods for assessing health risks among nuclear workers. The next two sections, which contain reports of health-effects research in biological systems, include effects of radiation and of energy-related chemicals. The last section is related to medical applications of nuclear technology.

  3. Pacific Northwest Laboratory: Annual report for 1986 to the DOE Office of Energy Research: Part 1, Biomedical sciences

    International Nuclear Information System (INIS)

    This report summarizes progress on OHER biomedical and health-effects research conducted at PNL in FY 1986. The research develops the knowledge and scientific principles necessary to identify, understand and anticipate the long-term health consequences of energy-related radiation and chemicals. Our continuing emphasis is to decrease the uncertainty of health-effects risk estimates from existing and/or developing energy-related technologies through an increased understanding of how radiation and chemicals cause health effects. The report is arranged to reflect the PNL research relative to OHER programmatic structure. The first section, on human health effects, concerns statistical and epidemiological methods for assessing health risks among nuclear workers. The next two sections, which contain reports of health-effects research in biological systems, include effects of radiation and of energy-related chemicals. The last section is related to medical applications of nuclear technology

  4. Pacific Northwest Laboratory annual report for 1987 to the DOE Office of Energy Research: Part 1, Biomedical Sciences

    Energy Technology Data Exchange (ETDEWEB)

    Park, J.F.

    1988-02-01

    This report summarizes progress on OHER biomedical and health-effects research conducted at Pacific Northwest Laboratory in FY 1987. The research develops the knowledge and scientific principles necessary to identify, understand, and anticipate the long-term health consequences of energy-related radiation and chemicals. Our continuing emphasis is to decrease the uncertainty of health-effects risk estimates from existing and/or developing energy-related technologies through an increased understanding of how radiation and chemicals cause health effects. The report is arranged to reflect PNL research relative to OHER programmatic structure. The first section, on human health effects, concerns statistical and epidemiological studies for assessing health risks. The next section, which contains reports of health-effects research in biological systems, includes research with radiation and chemicals. The last section is related to medical applications of nuclear technology.

  5. Medicine's perception of reality - a split picture: critical reflections on apparent anomalies within the biomedical theory of science.

    Science.gov (United States)

    Kirkengen, Anna Luise; Ekeland, Tor-Johan; Getz, Linn; Hetlevik, Irene; Schei, Edvin; Ulvestad, Elling; Vetlesen, Arne Johan

    2016-08-01

    Escalating costs, increasing multi-morbidity, medically unexplained health problems, complex risk, poly-pharmacy and antibiotic resistance can be regarded as artefacts of the traditional knowledge production in Western medicine, arising from its particular worldview. Our paper presents a historically grounded critical analysis of this view. The materialistic shift of Enlightenment philosophy, separating subjectivity from bodily matter, became normative for modern medicine and yielded astonishing results. The traditional dichotomies of mind/body and subjective/objective are, however, incompatible with modern biological theory. Medical knowledge ignores central tenets of human existence, notably the physiological impact of subjective experience, relationships, history and sociocultural contexts. Biomedicine will not succeed in resolving today's poorly understood health problems by doing 'more of the same'. We must acknowledge that health, sickness and bodily functioning are interwoven with human meaning-production, fundamentally personal and biographical. This implies that the biomedical framework, although having engendered 'success stories' like the era of antibiotics, needs to be radically revised.

  6. Pacific Northwest Laboratory annual report for 1985 to the DOE Office of Energy Research. Part 1. Biomedical sciences

    International Nuclear Information System (INIS)

    This report summarizes progress on OHER biomedical and health-effects research conducted at PNL in FY 1985 to develop information for a comprehensive understanding of the interaction of energy-related radiation and chemicals with man. Our continuing emphasis on decreasing the uncertainty of health-effects risk estimates to man from existing and/or developing energy-related technologies supports the DOE goal of increasing and diversifying national energy resources and decreasing risks to human health. The report is arranged to reflect the PNL research relative to OHER programmatic needs. The first section concerns evaluation of possible health effects among nuclear workers. The next two sections, which contain reports of health-effects research in biological systems, include health effects of radiation and health effects of chemical mixtures. The last section is related to medical applications of nuclear technology

  7. Pacific Northwest Laboratory annual report for 1985 to the DOE Office of Energy Research. Part 1. Biomedical sciences

    Energy Technology Data Exchange (ETDEWEB)

    Park, J.F.

    1986-02-01

    This report summarizes progress on OHER biomedical and health-effects research conducted at PNL in FY 1985 to develop information for a comprehensive understanding of the interaction of energy-related radiation and chemicals with man. Our continuing emphasis on decreasing the uncertainty of health-effects risk estimates to man from existing and/or developing energy-related technologies supports the DOE goal of increasing and diversifying national energy resources and decreasing risks to human health. The report is arranged to reflect the PNL research relative to OHER programmatic needs. The first section concerns evaluation of possible health effects among nuclear workers. The next two sections, which contain reports of health-effects research in biological systems, include health effects of radiation and health effects of chemical mixtures. The last section is related to medical applications of nuclear technology.

  8. Pacific Northwest Laboratory annual report for 1987 to the DOE Office of Energy Research: Part 1, Biomedical Sciences

    International Nuclear Information System (INIS)

    This report summarizes progress on OHER biomedical and health-effects research conducted at Pacific Northwest Laboratory in FY 1987. The research develops the knowledge and scientific principles necessary to identify, understand, and anticipate the long-term health consequences of energy-related radiation and chemicals. Our continuing emphasis is to decrease the uncertainty of health-effects risk estimates from existing and/or developing energy-related technologies through an increased understanding of how radiation and chemicals cause health effects. The report is arranged to reflect PNL research relative to OHER programmatic structure. The first section, on human health effects, concerns statistical and epidemiological studies for assessing health risks. The next section, which contains reports of health-effects research in biological systems, includes research with radiation and chemicals. The last section is related to medical applications of nuclear technology

  9. Aquisição e manipulação de imagens por tomografia computadorizada da região maxilofacial visando à obtenção de protótipos biomédicos Acquisition and manipulation of computed tomography images of the maxillofacial region for biomedical prototyping

    Directory of Open Access Journals (Sweden)

    Maria Inês Meurer

    2008-02-01

    Full Text Available O processo de construção de protótipos biomédicos surgiu da união das tecnologias de prototipagem rápida e do diagnóstico por imagens. No entanto, este processo é complexo, em função da necessária interação entre as ciências biomédicas e a engenharia. Para que bons resultados sejam obtidos, especial atenção deve ser dispensada à aquisição das imagens por tomografia computadorizada e à manipulação dessas imagens em softwares específicos. Este artigo apresenta a experiência multidisciplinar de um grupo de pesquisadores com a aquisição e a manipulação de imagens por tomografia computadorizada do complexo maxilofacial, visando à construção de protótipos biomédicos com finalidade cirúrgica.Biomedical prototyping has resulted from a merger of rapid prototyping and imaging diagnosis technologies. However, this process is complex, considering the necessity of interaction between biomedical sciences and engineering. Good results are highly dependent on the acquisition of computed tomography images and their subsequent manipulation by means of specific softwares. The present study describes the experience of a multidisciplinary group of researchers in the acquisition and manipulation of computed tomography images of the maxillofacial region aiming at biomedical prototyping for surgical purposes.

  10. Computer literacy and E-learning perception in Cameroon: the case of Yaounde Faculty of Medicine and Biomedical Sciences

    OpenAIRE

    Bediang, Georges Wylfred; Stoll, Beat; Geissbuhler, Antoine; Klohn, Axel Maximo; Stuckelberger, Astrid; Nko'o, Samuel; Chastonay, Philippe

    2013-01-01

    Background Health science education faces numerous challenges: assimilation of knowledge, management of increasing numbers of learners or changes in educational models and methodologies. With the emergence of e-learning, the use of information and communication technologies (ICT) and Internet to improve teaching and learning in health science training institutions has become a crucial issue for low and middle income countries, including sub-Saharan Africa. In this perspective, the Faculty of ...

  11. Biomedical photonics handbook

    CERN Document Server

    Vo-Dinh, Tuan

    2003-01-01

    1.Biomedical Photonics: A Revolution at the Interface of Science and Technology, T. Vo-DinhPHOTONICS AND TISSUE OPTICS2.Optical Properties of Tissues, J. Mobley and T. Vo-Dinh3.Light-Tissue Interactions, V.V. Tuchin 4.Theoretical Models and Algorithms in Optical Diffusion Tomography, S.J. Norton and T. Vo-DinhPHOTONIC DEVICES5.Laser Light in Biomedicine and the Life Sciences: From the Present to the Future, V.S. Letokhov6.Basic Instrumentation in Photonics, T. Vo-Dinh7.Optical Fibers and Waveguides for Medical Applications, I. Gannot and

  12. Curricular impact on elementary students' images of science: Informational science text read aloud and scientific inquiry

    Science.gov (United States)

    Brown, Tammy Colburn

    Understanding what influences images elementary students create about science has been researched for 30 years. This researcher sought to understand how the way science is presented in school influences images elementary students hold about science. The study's questions included: (1) What images of science do 2nd and 4th grade students portray through dialogue as they experience read alouds of informational science texts? (2) What images of science do 2nd and 4th grade students portray through dialogue as they experience science through inquiry with manipulative objects? and (3) What lifeworld resources influence students' images of science? Drawing upon symbolic interaction within a sociocultural framework, this qualitative study began during the summer of 2005 while students were enrolled in a summer program at their school and continued into the fall of 2007. Primary data included transcripts of students' dialogue during sessions, interviews, observations, field notes, demographic data, and assessment data. The researcher conducted 3 sessions with each of 4 groups of 3 students, spending 30 minutes observing, listening, and taping students in each session. All 12 students were interviewed after each of the 3 sessions on the same day resulting in approximately 18 hours of audiotapes. The researcher met with reading coaches, parents, and the selected students' teachers. Observations of the students and teachers in the context of their school environment were also made throughout the 2006-2007 regular school year. Emergent themes suggest that despite students using process skills in both sessions, the informational book reading sessions were ritualized such that the students viewed the experience as a reading exercise only and not being a scientist. In contrast, students in the manipulative sessions saw themselves as acting like or being scientists. Last, students in both sessions drew upon funds of knowledge accrued from sociocultural influences and home

  13. Image Segmentation Analysis for NASA Earth Science Applications

    Science.gov (United States)

    Tilton, James C.

    2010-01-01

    NASA collects large volumes of imagery data from satellite-based Earth remote sensing sensors. Nearly all of the computerized image analysis of this data is performed pixel-by-pixel, in which an algorithm is applied directly to individual image pixels. While this analysis approach is satisfactory in many cases, it is usually not fully effective in extracting the full information content from the high spatial resolution image data that s now becoming increasingly available from these sensors. The field of object-based image analysis (OBIA) has arisen in recent years to address the need to move beyond pixel-based analysis. The Recursive Hierarchical Segmentation (RHSEG) software developed by the author is being used to facilitate moving from pixel-based image analysis to OBIA. The key unique aspect of RHSEG is that it tightly intertwines region growing segmentation, which produces spatially connected region objects, with region object classification, which groups sets of region objects together into region classes. No other practical, operational image segmentation approach has this tight integration of region growing object finding with region classification This integration is made possible by the recursive, divide-and-conquer implementation utilized by RHSEG, in which the input image data is recursively subdivided until the image data sections are small enough to successfully mitigat the combinatorial explosion caused by the need to compute the dissimilarity between each pair of image pixels. RHSEG's tight integration of region growing object finding and region classification is what enables the high spatial fidelity of the image segmentations produced by RHSEG. This presentation will provide an overview of the RHSEG algorithm and describe how it is currently being used to support OBIA or Earth Science applications such as snow/ice mapping and finding archaeological sites from remotely sensed data.

  14. High Throughput Multispectral Image Processing with Applications in Food Science.

    Directory of Open Access Journals (Sweden)

    Panagiotis Tsakanikas

    Full Text Available Recently, machine vision is gaining attention in food science as well as in food industry concerning food quality assessment and monitoring. Into the framework of implementation of Process Analytical Technology (PAT in the food industry, image processing can be used not only in estimation and even prediction of food quality but also in detection of adulteration. Towards these applications on food science, we present here a novel methodology for automated image analysis of several kinds of food products e.g. meat, vanilla crème and table olives, so as to increase objectivity, data reproducibility, low cost information extraction and faster quality assessment, without human intervention. Image processing's outcome will be propagated to the downstream analysis. The developed multispectral image processing method is based on unsupervised machine learning approach (Gaussian Mixture Models and a novel unsupervised scheme of spectral band selection for segmentation process optimization. Through the evaluation we prove its efficiency and robustness against the currently available semi-manual software, showing that the developed method is a high throughput approach appropriate for massive data extraction from food samples.

  15. High Throughput Multispectral Image Processing with Applications in Food Science.

    Science.gov (United States)

    Tsakanikas, Panagiotis; Pavlidis, Dimitris; Nychas, George-John

    2015-01-01

    Recently, machine vision is gaining attention in food science as well as in food industry concerning food quality assessment and monitoring. Into the framework of implementation of Process Analytical Technology (PAT) in the food industry, image processing can be used not only in estimation and even prediction of food quality but also in detection of adulteration. Towards these applications on food science, we present here a novel methodology for automated image analysis of several kinds of food products e.g. meat, vanilla crème and table olives, so as to increase objectivity, data reproducibility, low cost information extraction and faster quality assessment, without human intervention. Image processing's outcome will be propagated to the downstream analysis. The developed multispectral image processing method is based on unsupervised machine learning approach (Gaussian Mixture Models) and a novel unsupervised scheme of spectral band selection for segmentation process optimization. Through the evaluation we prove its efficiency and robustness against the currently available semi-manual software, showing that the developed method is a high throughput approach appropriate for massive data extraction from food samples.

  16. Using a Popular Science Nonfiction Book to Introduce Biomedical Research Ethics in a Biology Majors Course †

    Science.gov (United States)

    Walton, Kristen L. W.

    2014-01-01

    Although bioethics is an important topic in modern society, it is not a required part of the curriculum for many biology degree programs in the United States. Students in our program are exposed to biologically relevant ethical issues informally in many classes, but we do not have a requirement for a separate bioethics course. The Immortal Life of Henrietta Lacks is a recent nonfiction book that describes the life of the woman whose cervical cancer biopsy gave rise to the HeLa cell line, as well as discussing relevant medical, societal, and ethical issues surrounding human tissue use for research. Weekly reading assignments from the book with discussion questions and a final paper were used to engage students in learning about the ethics of human subjects and human tissues research. Students were surveyed for qualitative feedback on the usefulness of including this book as part of the course. This book has been a successful platform for increasing student knowledge and interest in ethics related to biomedical and biological research. PMID:25574289

  17. Medicine's perception of reality - a split picture: critical reflections on apparent anomalies within the biomedical theory of science.

    Science.gov (United States)

    Kirkengen, Anna Luise; Ekeland, Tor-Johan; Getz, Linn; Hetlevik, Irene; Schei, Edvin; Ulvestad, Elling; Vetlesen, Arne Johan

    2016-08-01

    Escalating costs, increasing multi-morbidity, medically unexplained health problems, complex risk, poly-pharmacy and antibiotic resistance can be regarded as artefacts of the traditional knowledge production in Western medicine, arising from its particular worldview. Our paper presents a historically grounded critical analysis of this view. The materialistic shift of Enlightenment philosophy, separating subjectivity from bodily matter, became normative for modern medicine and yielded astonishing results. The traditional dichotomies of mind/body and subjective/objective are, however, incompatible with modern biological theory. Medical knowledge ignores central tenets of human existence, notably the physiological impact of subjective experience, relationships, history and sociocultural contexts. Biomedicine will not succeed in resolving today's poorly understood health problems by doing 'more of the same'. We must acknowledge that health, sickness and bodily functioning are interwoven with human meaning-production, fundamentally personal and biographical. This implies that the biomedical framework, although having engendered 'success stories' like the era of antibiotics, needs to be radically revised. PMID:25967850

  18. Biomedical Materials

    Institute of Scientific and Technical Information of China (English)

    CHANG Jiang; ZHOU Yanling

    2011-01-01

    @@ Biomedical materials, biomaterials for short, is regarded as "any substance or combination of substances, synthetic or natural in origin, which can be used for any period of time, as a whole or as part of a system which treats, augments, or replaces any tissue, organ or function of the body" (Vonrecum & Laberge, 1995).Biomaterials can save lives, relieve suffering and enhance the quality of life for human being.

  19. Early Childhood Pre-Service Teachers' Self-Images of Science Teaching in Constructivism Science Education Courses

    Science.gov (United States)

    Go, Youngmi; Kang, Jinju

    2015-01-01

    The purpose of this study is two-fold. First, it investigates the self-images of science teaching held by early childhood pre-service teachers who took constructivism early childhood science education courses. Second, it analyzes what aspects of those courses influenced these images. The participants were eight pre-service teachers who took these…

  20. Pacific Northwest Laboratory annual report for 1993 to the DOE Office of Energy Research. Part 1: Biomedical Sciences

    Energy Technology Data Exchange (ETDEWEB)

    Lumetta, C.C. [ed.; Park, J.F.

    1994-03-01

    This report summarizes FY 1993 progress in biological and general life sciences research programs conducted for the Department of Energy`s Office of Health and Environmental REsearch (OHER) at Pacific Northwest Laboratory (PNL). This research provides knowledge of fundamental principles necessary to identify, understand, and anticipate the long-term health consequences of exposure to energy-related radiation and chemicals. The Biological Research section contains reports of studies using laboratory animals, in vitro cell systems, and molecular biological systems. This research includes studies of the impact of radiation, radionuclides, and chemicals on biological responses at all levels of biological organization. The General Life Sciences Research section reports research conducted for the OHER human genome program.

  1. Pacific Northwest Laboratory annual report for 1991 to the DOE Office of Energy Research. Part 1, Biomedical sciences

    Energy Technology Data Exchange (ETDEWEB)

    Park, J.F.

    1992-09-01

    This report summarizes progress in OHER biological research and general life sciences research programs conducted conducted at PNL in FLY 1991. The research develops the knowledge and scientific principles necessary to identify, understand, and anticipate the long- term health consequences of energy-related radiation and chemicals. Our continuing emphasis is to decrease the uncertainty of health risk estimates from existing and newly developed energy-related technologies through an increased understanding of the ways in which radiation and chemicals cause biological damage.

  2. The use of non-human primates in biomedical research: addressing the replacement impasse through the social dynamics of science

    OpenAIRE

    Hudson-Shore, Michelle

    2015-01-01

    Non-human primate experimentation provokes passionate and opposing exchanges, particularly in the UK. This disagreement contributes to an impasse which in turn has prevented the exploration of the important question, if and how primate research could be ended. This project aims to support the examination of this question of impasse presenting data on how it might be overcome by providing a novel and challenging perspective using a multi-method approach, and insights from science and technolog...

  3. A Review of Biomedical Composite Materials

    Institute of Scientific and Technical Information of China (English)

    吴珊珊

    2013-01-01

    This article addresses the review of the biomedical composite materials.It introduces the operational definition,the classification of biomedical composite materials,and its constituents within itself.In this thesis,the last part presents the application of this kind of material.By writing this paper,I hope that people will get a comprehensive knowledge of the biomedical composite material and make further and deeper research in this material by which way to animate the material science industry.

  4. Towards a Science of Community Stakeholder Engagement in Biomedical HIV Prevention Trials: An Embedded Four-Country Case Study.

    Directory of Open Access Journals (Sweden)

    Peter A Newman

    Full Text Available Broad international guidelines and studies in the context of individual clinical trials highlight the centrality of community stakeholder engagement in conducting ethically rigorous HIV prevention trials. We explored and identified challenges and facilitators for community stakeholder engagement in biomedical HIV prevention trials in diverse global settings. Our aim was to assess and deepen the empirical foundation for priorities included in the GPP guidelines and to highlight challenges in implementation that may merit further attention in subsequent GPP iterations.From 2008-2012 we conducted an embedded, multiple case study centered in Thailand, India, South Africa and Canada. We conducted in-depth interviews and focus groups with respondents from different trial-related subsystems: civil society organization representatives, community advocates, service providers, clinical trialists/researchers, former trial participants, and key HIV risk populations. Interviews/focus groups were recorded, and coded using thematic content analysis. After intra-case analyses, we conducted cross-case analysis to contrast and synthesize themes and sub-themes across cases. Lastly, we applied the case study findings to explore and assess UNAIDS/AVAC GPP guidelines and the GPP Blueprint for Stakeholder Engagement.Across settings, we identified three cross-cutting themes as essential to community stakeholder engagement: trial literacy, including lexicon challenges and misconceptions that imperil sound communication; mistrust due to historical exploitation; and participatory processes: engaging early; considering the breadth of "community"; and, developing appropriate stakeholder roles. Site-specific challenges arose in resource-limited settings and settings where trials were halted.This multiple case study revealed common themes underlying community stakeholder engagement across four country settings that largely mirror GPP goals and the GPP Blueprint, as well as

  5. The Gemini Planet Imager: From Science to Design to Construction

    Energy Technology Data Exchange (ETDEWEB)

    Macintosh, B; Graham, J R; Palmer, D; Doyon, R; Dunn, J; Gavel, D; Larkin, J; Oppenheimer, B; Saddlemyer, L; Sivaramakrishnan, A; Wallace, J K; Bauman, B; Erickson, D; Marois, C; Poyneer, L; Soummer, R

    2008-07-01

    The Gemini Planet Imager (GPI) is a facility instrument under construction for the 8-m Gemini South telescope. It combines a 1500 subaperture AO system using a MEMS deformable mirror, an apodized-pupil Lyot coronagraph, a high-accuracy IR interferometer calibration system, and a near-infrared integral field spectrograph to allow detection and characterization of self-luminous extrasolar planets at planet/star contrast ratios of 10{sup -7}. I will discuss the evolution from science requirements through modeling to the final detailed design, provide an overview of the subsystems and show models of the instrument's predicted performance.

  6. Planet Formation Imager (PFI): science vision and key requirements

    CERN Document Server

    Kraus, Stefan; Ireland, Michael J; Duchene, Gaspard; Espaillat, Catherine; Hoenig, Sebastian; Juhasz, Attila; Mordasini, Chris; Olofsson, Johan; Paladini, Claudia; Stassun, Keivan; Turner, Neal; Vasisht, Gautam; Harries, Tim J; Bate, Matthew R; Gonzalez, Jean-Francois; Matter, Alexis; Zhu, Zhaohuan; Panic, Olja; Regaly, Zsolt; Morbidelli, Alessandro; Meru, Farzana; Wolf, Sebastian; Ilee, John; Berger, Jean-Philippe; Zhao, Ming; Kral, Quentin; Morlok, Andreas; Bonsor, Amy; Ciardi, David; Kane, Stephen R; Kratter, Kaitlin; Laughlin, Greg; Pepper, Joshua; Raymond, Sean; Labadie, Lucas; Nelson, Richard P; Weigelt, Gerd; Brummelaar, Theo ten; Pierens, Arnaud; Oudmaijer, Rene; Kley, Wilhelm; Pope, Benjamin; Jensen, Eric L N; Bayo, Amelia; Smith, Michael; Boyajian, Tabetha; Quiroga-Nunez, Luis Henry; Millan-Gabet, Rafael; Chiavassa, Andrea; Gallenne, Alexandre; Reynold, Mark; de Wit, Willem-Jan; Wittkowski, Markus; Millour, Florentin; Gandhi, Poshak; Almeida, Cristina Ramos; Herrero, Almudena Alonso; Packham, Chris; Kishimoto, Makoto; Tristram, Konrad R W; Pott, Joerg-Uwe; Surdej, Jean; Buscher, David; Haniff, Chris; Lacour, Sylvestre; Petrov, Romain; Ridgway, Steve; Tuthill, Peter; van Belle, Gerard; Armitage, Phil; Baruteau, Clement; Benisty, Myriam; Bitsch, Bertram; Paardekooper, Sijme-Jan; Pinte, Christophe; Masset, Frederic; Rosotti, Giovanni P

    2016-01-01

    The Planet Formation Imager (PFI) project aims to provide a strong scientific vision for ground-based optical astronomy beyond the upcoming generation of Extremely Large Telescopes. We make the case that a breakthrough in angular resolution imaging capabilities is required in order to unravel the processes involved in planet formation. PFI will be optimised to provide a complete census of the protoplanet population at all stellocentric radii and over the age range from 0.1 to about 100 Myr. Within this age period, planetary systems undergo dramatic changes and the final architecture of planetary systems is determined. Our goal is to study the planetary birth on the natural spatial scale where the material is assembled, which is the "Hill Sphere" of the forming planet, and to characterise the protoplanetary cores by measuring their masses and physical properties. Our science working group has investigated the observational characteristics of these young protoplanets as well as the migration mechanisms that mig...

  7. The Mars Science Laboratory Mars Hand Lens Imager (MSL MAHLI)

    Science.gov (United States)

    Minitti, Michelle E.; Edgett, Kenneth S.; Msl Mastcam/Mahli/Mardi Team

    2007-10-01

    The Mars Science Laboratory (MSL) rover mission, slated to begin Martian surface operations in 2010, seeks to explore the past and present habitability of a yet-to-be-selected site on Mars. Armed with a suite of instruments capable of spectral, chemical, mineralogical, organic and isotopic analyses, MSL will comprehensively study the Martian atmosphere and rocks and soils on the Martian surface. The Mars Hand Lens Imager (MAHLI), the "geologist's handlens" for MSL, supports habitability studies through aiding the selection of samples for in-depth analysis and placing such samples in a geologic and geomorphic context. More broadly, the goal of MAHLI is to examine the texture, morphology, structure, mineralogy, and stratigraphy of rocks, soils, frost and ice at the microscale. MAHLI will achieve this objective using capabilities new to Martian cameras including a CCD with a Bayer Pattern Filter coupled with a focusable lens. The Bayer Pattern Filter produces RGB color images akin to those taken by the standard commercial digital camera. Placement of MAHLI by the MSL Robotic Arm (RA) at a particular distance from the sample of interest and MAHLI's internal focus mechanism combine to achieve a desired image resolution. At its closest placement (22.5 mm), MAHLI has 9 µm/pixel resolution. In practice, RA placement may be sufficiently uncertain that 9 µm/pixel will not be achieved regularly; however, resolutions in the 12-15 µm/pixel range are expected for typical high resolution images. Depending on the target distance and its surface relief, the target may not be in focus over the entire image. For those cases, MAHLI acquires a series of images taken at a range of focus positions that bracket the location of best focus. MAHLI's onboard software is capable of merging this stack of images, into a single best-focus image. MAHLI can image in natural illumination but it also possesses four, white light emitting diodes (LED) for illumination of samples in shadow or at

  8. Optical Polarizationin Biomedical Applications

    CERN Document Server

    Tuchin, Valery V; Zimnyakov, Dmitry A

    2006-01-01

    Optical Polarization in Biomedical Applications introduces key developments in optical polarization methods for quantitative studies of tissues, while presenting the theory of polarization transfer in a random medium as a basis for the quantitative description of polarized light interaction with tissues. This theory uses the modified transfer equation for Stokes parameters and predicts the polarization structure of multiple scattered optical fields. The backscattering polarization matrices (Jones matrix and Mueller matrix) important for noninvasive medical diagnostic are introduced. The text also describes a number of diagnostic techniques such as CW polarization imaging and spectroscopy, polarization microscopy and cytometry. As a new tool for medical diagnosis, optical coherent polarization tomography is analyzed. The monograph also covers a range of biomedical applications, among them cataract and glaucoma diagnostics, glucose sensing, and the detection of bacteria.

  9. Pacific Northwest Laboratory annual report for 1989 to the DOE Office of Energy Research - Part 1: Biomedical Sciences

    Energy Technology Data Exchange (ETDEWEB)

    Park, J.F.

    1990-05-01

    This report summarizes progress on OHER human health, biological, general life sciences, and medical applications research programs conducted at PNL in FY 1989. The research develops the knowledge and scientific principles necessary to identify, understand, and anticipate the long-term health consequences of energy-related radiation and chemicals. Our continuing emphasis is to decrease the uncertainty of health risk estimates from existing and developing energy-related technologies through an increased understanding of how radiation and chemicals cause biological damage. The sequence of this report of PNL research reflects the OHER programmatic structure. The first section, on human health research, concerns statistical and epidemiological studies for assessing health risks. The next section contains reports of biological research in laboratory animals and in vitro cell systems, including research with radionuclides and chemicals. The general life sciences research section reports research conducted for the OHER human genome research program, and the medical applications section summarizes commercial radioisotope production and distribution activities at DOE facilities. 6 refs., 50 figs., 35 tabs.

  10. Rhythm Analysis by Heartbeat Classification in the Electrocardiogram (Review article of the research achievements of the members of the Centre of Biomedical Engineering, Bulgarian Academy of Sciences

    Directory of Open Access Journals (Sweden)

    Irena Jekova

    2009-08-01

    Full Text Available The morphological and rhythm analysis of the electrocardiogram (ECG is based on ventricular beats detection, wave parameters measurement, as amplitudes, widths, polarities, intervals and relations between them, and a subsequent classification supporting the diagnostic process. Number of algorithms for detection and classification of the QRS complexes have been developed by researchers in the Centre of Biomedical Engineering - Bulgarian Academy of Sciences, and are reviewed in this material. Combined criteria have been introduced dealing with the QRS areas and amplitudes, the waveshapes evaluated by steep slopes and sharp peaks, vectorcardiographic (VCG loop descriptors, RR intervals irregularities. Algorithms have been designed for application on a single ECG lead, a synthesized lead derived by multichannel synchronous recordings, or simultaneous multilead analysis. Some approaches are based on templates matching, cross-correlation or rely on a continuous updating of adaptive thresholds. Various beat classification methods have been designed involving discriminant analysis, the K-th nearest neighbors, fuzzy sets, genetic algorithms, neural networks, etc. The efficiency of the developed methods has been assessed using internationally recognized arrhythmia ECG databases with annotated beats and rhythm disturbances. In general, high values for specificity and sensitivity competitive to those reported in the literature have been achieved.

  11. Biomedical Social Science, Unit I: Health and Society. Basic Social Science Inquiry Into Health-Related Problems. Instructor's Manual. Revised Version, 1975.

    Science.gov (United States)

    Biomedical Interdisciplinary Curriculum Project, Berkeley, CA.

    This guide presents lesson plans to accompany the lessons presented in the associated student text. The lessons are designed to teach social science concepts that enhance the prospective health care practitioner's ability to interact effectively with people and to anticipate the demands of health care delivery situations. An introduction to the…

  12. The High Resolution Imaging Science Experiment (HiRISE) during MRO's Primary Science Phase (PSP)

    Science.gov (United States)

    McEwen, A.S.; Banks, M.E.; Baugh, N.; Becker, K.; Boyd, A.; Bergstrom, J.W.; Beyer, R.A.; Bortolini, E.; Bridges, N.T.; Byrne, S.; Castalia, B.; Chuang, F.C.; Crumpler, L.S.; Daubar, I.; Davatzes, A.K.; Deardorff, D.G.; DeJong, A.; Alan, Delamere W.; Dobrea, E.N.; Dundas, C.M.; Eliason, E.M.; Espinoza, Y.; Fennema, A.; Fishbaugh, K.E.; Forrester, T.; Geissler, P.E.; Grant, J. A.; Griffes, J.L.; Grotzinger, J.P.; Gulick, V.C.; Hansen, C.J.; Herkenhoff, K. E.; Heyd, R.; Jaeger, W.L.; Jones, D.; Kanefsky, B.; Keszthelyi, L.; King, R.; Kirk, R.L.; Kolb, K.J.; Lasco, J.; Lefort, A.; Leis, R.; Lewis, K.W.; Martinez-Alonso, S.; Mattson, S.; McArthur, G.; Mellon, M.T.; Metz, J.M.; Milazzo, M.P.; Milliken, R.E.; Motazedian, T.; Okubo, C.H.; Ortiz, A.; Philippoff, A.J.; Plassmann, J.; Polit, A.; Russell, P.S.; Schaller, C.; Searls, M.L.; Spriggs, T.; Squyres, S. W.; Tarr, S.; Thomas, N.; Thomson, B.J.; Tornabene, L.L.; Van Houten, C.; Verba, C.; Weitz, C.M.; Wray, J.J.

    2010-01-01

    The High Resolution Imaging Science Experiment (HiRISE) on the Mars Reconnaissance Orbiter (MRO) acquired 8 terapixels of data in 9137 images of Mars between October 2006 and December 2008, covering ???0.55% of the surface. Images are typically 5-6 km wide with 3-color coverage over the central 20% of the swath, and their scales usually range from 25 to 60 cm/pixel. Nine hundred and sixty stereo pairs were acquired and more than 50 digital terrain models (DTMs) completed; these data have led to some of the most significant science results. New methods to measure and correct distortions due to pointing jitter facilitate topographic and change-detection studies at sub-meter scales. Recent results address Noachian bedrock stratigraphy, fluvially deposited fans in craters and in or near Valles Marineris, groundwater flow in fractures and porous media, quasi-periodic layering in polar and non-polar deposits, tectonic history of west Candor Chasma, geometry of clay-rich deposits near and within Mawrth Vallis, dynamics of flood lavas in the Cerberus Palus region, evidence for pyroclastic deposits, columnar jointing in lava flows, recent collapse pits, evidence for water in well-preserved impact craters, newly discovered large rayed craters, and glacial and periglacial processes. Of particular interest are ongoing processes such as those driven by the wind, impact cratering, avalanches of dust and/or frost, relatively bright deposits on steep gullied slopes, and the dynamic seasonal processes over polar regions. HiRISE has acquired hundreds of large images of past, present and potential future landing sites and has contributed to scientific and engineering studies of those sites. Warming the focal-plane electronics prior to imaging has mitigated an instrument anomaly that produces bad data under cold operating conditions. ?? 2009 Elsevier Inc.

  13. Integrated Biomaterials for Biomedical Technology

    CERN Document Server

    Ramalingam, Murugan; Ramakrishna, Seeram; Kobayashi, Hisatoshi

    2012-01-01

    This cutting edge book provides all the important aspects dealing with the basic science involved in materials in biomedical technology, especially structure and properties, techniques and technological innovations in material processing and characterizations, as well as the applications. The volume consists of 12 chapters written by acknowledged experts of the biomaterials field and covers a wide range of topics and applications.

  14. Biomedical Engineering Education in Perspective

    Science.gov (United States)

    Gowen, Richard J.

    1973-01-01

    Discusses recent developments in the health care industry and their impact on the future of biomedical engineering education. Indicates that a more thorough understanding of the complex functions of the living organism can be acquired through the application of engineering techniques to problems of life sciences. (CC)

  15. Cassini Imaging Science Subsystem observations of Titan's south polar cloud

    Science.gov (United States)

    West, R. A.; Del Genio, A. D.; Barbara, J. M.; Toledo, D.; Lavvas, P.; Rannou, P.; Turtle, E. P.; Perry, J.

    2016-05-01

    In May of 2012 images of Titan obtained by the Cassini Imaging Science Subsystem (ISS) showed a newly-formed cloud patch near the southern pole. The cloud has unusual morphology and texture suggesting that it is formed by condensation at an altitude much higher than expected for any of the known organics in Titan's atmosphere. We measured the altitude to be 300 ± 10 km from images when the feature was on the limb. Limb images suggest that the initial stages of the formation began in late 2011. It was just visible in images obtained in 2014 but is not expected to be visible in the future due to enveloping darkness as the season progresses. The feature has a slightly different color than the surrounding haze. Its optical thickness is near 2 at 889 nm wavelength and the particle imaginary refractive index must be less than 5 × 10-4 at that wavelength. Wind vectors derived from a time series show that it is rotating about a center offset by 4.5° from Titan's solid-body spin axis, consistent with that found from the temperature field by Achterberg et al. (Achterberg, R.K., Conrath, B.J., Gierasch, P.J., Flasar, F.M., Nixon, C.A. [2008a]. Icarus 197, 549-555) and subsequent measurements. The feature rotates at an angular velocity near the rate expected for transport of angular momentum from the low latitudes to the pole. The clumpy texture of the feature resembles that of terrestrial cloud fields undergoing open cell convection, an unusual configuration initiated by downwelling.

  16. NIH/NSF accelerate biomedical research innovations

    Science.gov (United States)

    A collaboration between the National Science Foundation and the National Institutes of Health will give NIH-funded researchers training to help them evaluate their scientific discoveries for commercial potential, with the aim of accelerating biomedical in

  17. Contrast-enhanced continuous-terahertz-wave imaging based on superparamagnetic iron oxide nanoparticles for biomedical applications.

    Science.gov (United States)

    Zhang, Rui; Zhang, Liangliang; Wu, Tong; Zuo, Shasha; Wang, Ruixue; Zhang, Cunlin; Zhang, Jue; Fang, Jing

    2016-04-18

    We present a novel contrast-enhanced continuous-terahertz-wave imaging modality based on magnetic induction heating of superparamagnetic iron oxide nanoparticles (SPIOs), which yields a highly sensitive increment in the reflection terahertz (THz) signal in SPIO solution upon exposure to an alternating magnetic field. In the differential and relative refection change focal-plane images before and after alternating magnetic field exposure, a dramatic contrast is demonstrated between water with and without SPIOs. This low-cost, simple, and stable contrast-enhanced continuous-THz-wave imaging system is suitable for miniaturization and real-time imaging application.

  18. Three-dimensional force microscope: A nanometric optical tracking and magnetic manipulation system for the biomedical sciences

    Science.gov (United States)

    Fisher, J. K.; Cummings, J. R.; Desai, K. V.; Vicci, L.; Wilde, B.; Keller, K.; Weigle, C.; Bishop, G.; Taylor, R. M.; Davis, C. W.; Boucher, R. C.; O'Brien, E. Timothy; Superfine, R.

    2005-05-01

    We report here the development of a three-dimensional (3D) magnetic force microscope for applying forces to and measuring responses of biological systems and materials. This instrument combines a conventional optical microscope with a free-floating or specifically bound magnetic bead used as a mechanical probe. Forces can be applied by the bead to microscopic structures of interest (specimens), while the reaction displacement of the bead is measured. This enables 3D mechanical manipulations and measurements to be performed on specimens in fluids. Force is generated by the magnetically permeable bead in reaction to fields produced by external electromagnets. The displacement is measured by interferometry using forward light scattered by the bead from a focused laser beam. The far-field interference pattern is imaged on a quadrant photodetector from which the 3D displacement can be computed over a limited range about the focal point. The bead and specimen are mounted on a 3D translation stage and feedback techniques are used to keep the bead within this limited range. We demonstrate the system with application to beads attached to cilia in human lung cell cultures.

  19. [Projects to accelerate the practical use of innovative medical devices to collaborate with TWIns, Center for Advanced Biomedical Sciences, Waseda University and School of Engineering, The University of Tokyo].

    Science.gov (United States)

    Niimi, Shingo; Umezu, Mitsuo; Iseki, Hiroshi; Harada, Hiroshi Kasanuki Noboru; Mitsuishi, Mamoru; Kitamori, Takehiko; Tei, Yuichi; Nakaoka, Ryusuke; Haishima, Yuji

    2014-01-01

    Division of Medical Devices has been conducting the projects to accelerate the practical use of innovative medical devices to collaborate with TWIns, Center for Advanced Biomedical Sciences, Waseda University and School of Engineering, The University of Tokyo. The TWIns has been studying to aim at establishment of preclinical evaluation methods by "Engineering Based Medicine", and established Regulatory Science Institute for Medical Devices. School of Engineering, The University of Tokyo has been studying to aim at establishment of assessment methodology for innovative minimally invasive therapeutic devices, materials, and nanobio diagnostic devices. This report reviews the exchanges of personnel, the implement systems and the research progress of these projects.

  20. Do physicians make their articles readable for their blind or low-vision patients? An analysis of current image processing practices in biomedical journals from the point of view of accessibility.

    Science.gov (United States)

    Splendiani, Bruno; Ribera, Mireia; Garcia, Roberto; Termens, Miquel

    2014-08-01

    Visual content in biomedical academic papers is a growing source of critical information, but it is not always fully readable for people with visual impairments. We aimed to assess current image processing practices, accessibility policies, and submission policies in a sample of 12 highly cited biomedical journals. We manually checked the application of text-based alternative image descriptions for every image in 12 articles (one for each journal). We determined whether the journals claimed to follow an accessibility policy and we reviewed their submission policy and their guidelines related to the visual content. We identified important features concerning the processing of images and the characteristics of the visual and the retrieval options of visual content offered by the publishers. The evaluation shows that the actual practices of textual image description in highly cited biomedical journals do not follow general guidelines on accessibility. The images within the articles analyzed lack alternative descriptions or have uninformative descriptions, even in the case of journals claiming to follow an accessibility policy. Consequently, the visual information of scientific articles is not accessible to people with severe visual disabilities. Instructions on image submission are heterogeneous and a declaration of accessibility guidelines was only found in two thirds of the sample of journals, with one third not explicitly following any accessibility policy, although they are required to by law. PMID:24504831

  1. Material Science Image Analysis using Quant-CT in ImageJ

    Energy Technology Data Exchange (ETDEWEB)

    Ushizima, Daniela M.; Bianchi, Andrea G. C.; DeBianchi, Christina; Bethel, E. Wes

    2015-01-05

    We introduce a computational analysis workflow to access properties of solid objects using nondestructive imaging techniques that rely on X-ray imaging. The goal is to process and quantify structures from material science sample cross sections. The algorithms can differentiate the porous media (high density material) from the void (background, low density media) using a Boolean classifier, so that we can extract features, such as volume, surface area, granularity spectrum, porosity, among others. Our workflow, Quant-CT, leverages several algorithms from ImageJ, such as statistical region merging and 3D object counter. It also includes schemes for bilateral filtering that use a 3D kernel, for parallel processing of sub-stacks, and for handling over-segmentation using histogram similarities. The Quant-CT supports fast user interaction, providing the ability for the user to train the algorithm via subsamples to feed its core algorithms with automated parameterization. Quant-CT plugin is currently available for testing by personnel at the Advanced Light Source and Earth Sciences Divisions and Energy Frontier Research Center (EFRC), LBNL, as part of their research on porous materials. The goal is to understand the processes in fluid-rock systems for the geologic sequestration of CO2, and to develop technology for the safe storage of CO2 in deep subsurface rock formations. We describe our implementation, and demonstrate our plugin on porous material images. This paper targets end-users, with relevant information for developers to extend its current capabilities.

  2. The OPFOS microscopy family: High-resolution optical-sectioning of biomedical specimens

    CERN Document Server

    Buytaert, Jan A N; Adriaens, Dominique; Dirckx, Joris J J

    2011-01-01

    We report on the recently emerging (Laser) Light Sheet based Fluorescence Microscopy field (LSFM). The techniques used in this field allow to study and visualize biomedical objects non-destructively in high-resolution through virtual optical sectioning with sheets of laser light. Fluorescence originating in the cross section of the sheet and sample is recorded orthogonally with a camera. In this paper, the first implementation of LSFM to image biomedical tissue in three dimensions - Orthogonal-Plane Fluorescence Optical Sectioning microscopy (OPFOS) - is discussed. Since then many similar and derived methods have surfaced (SPIM, Ultramicroscopy, HR-OPFOS, mSPIM, DSLM, TSLIM...) which we all briefly discuss. All these optical sectioning methods create images showing histological detail. We illustrate the applicability of LSFM on several specimen types with application in biomedical and life sciences.

  3. Writing intelligible English prose for biomedical journals.

    Science.gov (United States)

    Ludbrook, John

    2007-01-01

    1. I present a combination of semi-objective and subjective evidence that the quality of English prose in biomedical scientific writing is deteriorating. 2. I consider seven possible strategies for reversing this apparent trend. These refer to a greater emphasis on good writing by students in schools and by university students, consulting books on science writing, one-on-one mentoring, using 'scientific' measures to reveal lexical poverty, making use of freelance science editors and encouraging the editors of biomedical journals to pay more attention to the problem. 3. I conclude that a fruitful, long-term, strategy would be to encourage more biomedical scientists to embark on a career in science editing. This strategy requires a complementary initiative on the part of biomedical research institutions and universities to employ qualified science editors. 4. An immediately realisable strategy is to encourage postgraduate students in the biomedical sciences to undertake the service courses provided by many universities on writing English prose in general and scientific prose in particular. This strategy would require that heads of departments and supervisors urge their postgraduate students to attend such courses. 5. Two major publishers of biomedical journals, Blackwell Publications and Elsevier Science, now provide lists of commercial editing services on their web sites. I strongly recommend that authors intending to submit manuscripts to their journals (including Blackwell's Clinical and Experimental Pharmacology and Physiology) make use of these services. This recommendation applies especially to those for whom English is a second language.

  4. H-ATLAS: PACS imaging for the Science Demonstration Phase

    Science.gov (United States)

    Ibar, Edo; Ivison, R. J.; Cava, A.; Rodighiero, G.; Buttiglione, S.; Temi, P.; Frayer, D.; Fritz, J.; Leeuw, L.; Baes, M.; Rigby, E.; Verma, A.; Serjeant, S.; Müller, T.; Auld, R.; Dariush, A.; Dunne, L.; Eales, S.; Maddox, S.; Panuzzo, P.; Pascale, E.; Pohlen, M.; Smith, D.; de Zotti, G.; Vaccari, M.; Hopwood, R.; Cooray, A.; Burgarella, D.; Jarvis, M.

    2010-11-01

    We describe the reduction of data taken with the PACS instrument on board the Herschel Space Observatory in the Science Demonstration Phase of the Herschel-ATLAS (H-ATLAS) survey, specifically data obtained for a 4 × 4 deg2 region using Herschel's fast-scan (60arcsecs-1) parallel mode. We describe in detail a pipeline for data reduction using customized procedures within HIPE from data retrieval to the production of science-quality images. We found that the standard procedure for removing cosmic ray glitches also removed parts of bright sources and so implemented an effective two-stage process to minimize these problems. The pronounced 1/f noise is removed from the timelines using 3.4- and 2.5-arcmin boxcar high-pass filters at 100 and 160μm. Empirical measurements of the point spread function (PSF) are used to determine the encircled energy fraction as a function of aperture size. For the 100- and 160-μm bands, the effective PSFs are ~9 and ~13arcsec (FWHM), and the 90-per cent encircled energy radii are 13 and 18arcsec. Astrometric accuracy is good to advertised prior to launch. For a pair of cross-scans, the 5σ point-source sensitivities are 125-165mJy for 9-13 arcsec radius apertures at 100μm and 150-240mJy for 13-18 arcsec radius apertures at 160μm.

  5. H-ATLAS: PACS imaging for the Science Demonstration Phase

    CERN Document Server

    Ibar, Edo; Cava, A; Rodighiero, G; Buttiglione, S; Temi, P; Frayer, D; Fritz, J; Leeuw, L; Baes, M; Rigby, E; Verma, A; Serjeant, S; Muller, T; Auld, R; Dariush, A; Dunne, L; Eales, S; Maddox, S; Panuzzo, P; Pascale, E; Pohlen, M; Smith, D; de Zotti, G; Vaccari, M; Hopwood, R; Cooray, A; Burgarella, D; Jarvis, M

    2010-01-01

    We describe the reduction of data taken with the PACS instrument on board the Herschel Space Observatory in the Science Demonstration Phase of the Herschel-ATLAS (H-ATLAS) survey, specifically data obtained for a 4x4-deg^2 region using Herschel's fast-scan (60 arcsec/s) parallel mode. We describe in detail a pipeline for data reduction using customised procedures within HIPE from data retrieval to the production of science-quality images. We found that the standard procedure for removing Cosmic-Ray glitches also removed parts of bright sources and so implemented an effective two-stage process to minimise these problems. The pronounced 1/f noise is removed from the timelines using 3.4- and 2.5-arcmin boxcar high-pass filters at 100 and 160-um. Empirical measurements of the point-spread function (PSF) are used to determine the encircled energy fraction as a function of aperture size. For the 100- and 160-um bands, the effective PSFs are ~9 and ~13 arcsec (FWHM), and the 90-per-cent encircled energy radii are 13...

  6. Reconstruction of color biomedical images by means of quaternion generic Jacobi-Fourier moments in the framework of polar pixels.

    Science.gov (United States)

    Camacho-Bello, César; Padilla-Vivanco, Alfonso; Toxqui-Quitl, Carina; Báez-Rojas, José Javier

    2016-01-01

    A detailed analysis of the quaternion generic Jacobi-Fourier moments (QGJFMs) for color image description is presented. In order to reach numerical stability, a recursive approach is used during the computation of the generic Jacobi radial polynomials. Moreover, a search criterion is performed to establish the best values for the parameters [Formula: see text] and [Formula: see text] of the radial Jacobi polynomial families. Additionally, a polar pixel approach is taken into account to increase the numerical accuracy in the calculation of the QGJFMs. To prove the mathematical theory, some color images from optical microscopy and human retina are used. Experiments and results about color image reconstruction are presented. PMID:27014716

  7. Environmental/Biomedical Terminology Index

    Energy Technology Data Exchange (ETDEWEB)

    Huffstetler, J.K.; Dailey, N.S.; Rickert, L.W.; Chilton, B.D.

    1976-12-01

    The Information Center Complex (ICC), a centrally administered group of information centers, provides information support to environmental and biomedical research groups and others within and outside Oak Ridge National Laboratory. In-house data base building and development of specialized document collections are important elements of the ongoing activities of these centers. ICC groups must be concerned with language which will adequately classify and insure retrievability of document records. Language control problems are compounded when the complexity of modern scientific problem solving demands an interdisciplinary approach. Although there are several word lists, indexes, and thesauri specific to various scientific disciplines usually grouped as Environmental Sciences, no single generally recognized authority can be used as a guide to the terminology of all environmental science. If biomedical terminology for the description of research on environmental effects is also needed, the problem becomes even more complex. The building of a word list which can be used as a general guide to the environmental/biomedical sciences has been a continuing activity of the Information Center Complex. This activity resulted in the publication of the Environmental Biomedical Terminology Index (EBTI).

  8. Environmental/Biomedical Terminology Index

    International Nuclear Information System (INIS)

    The Information Center Complex (ICC), a centrally administered group of information centers, provides information support to environmental and biomedical research groups and others within and outside Oak Ridge National Laboratory. In-house data base building and development of specialized document collections are important elements of the ongoing activities of these centers. ICC groups must be concerned with language which will adequately classify and insure retrievability of document records. Language control problems are compounded when the complexity of modern scientific problem solving demands an interdisciplinary approach. Although there are several word lists, indexes, and thesauri specific to various scientific disciplines usually grouped as Environmental Sciences, no single generally recognized authority can be used as a guide to the terminology of all environmental science. If biomedical terminology for the description of research on environmental effects is also needed, the problem becomes even more complex. The building of a word list which can be used as a general guide to the environmental/biomedical sciences has been a continuing activity of the Information Center Complex. This activity resulted in the publication of the Environmental Biomedical Terminology Index

  9. Learning in a Belgian Hospital: Conditions of biomedical innovation in the Sector of Health Sciences at the Université catholique de Louvain.

    OpenAIRE

    Moyson, Stéphane; Aubin, David

    2009-01-01

    markdownabstract__INTRODUCTION __ This report is part of “Medlearn”. Medlearn is a research project coordinated by Prof. E. MONTPETIT (Université de Montréal, Canada), in collaboration with Prof. D. AUBIN (Université catholique de Louvain, Belgium) and Prof. M. ATKINSON (University of Saskatchewan, Canada). Academic Medical Centers (AMCs) are often at the center of biomedical innovation. The objective of this research project is to better understand the conditions of biomedical innovation wit...

  10. A study on knowledge and practice regarding biomedical waste management among staff nurses and nursing students of Rajendra Institute of Medical Sciences, Ranchi

    OpenAIRE

    Shamim Haider; Sneha Kumari; Vivek Kashyap; Shalini Sunderam; Shashi Bhushan Singh

    2015-01-01

    Background: Hospitals are the centre of cure and also the important centres of infectious waste generation. Effective management of Biomedical Waste (BMW) is not only a legal necessity but also a social responsibility. Aims and Objectives: To assess the knowledge and practice in managing the biomedical wastes among nursing staff and student nurses in RIMS, Ranchi. Materials and methods: The study was conducted at RIMS, Ranchi from Oct 2013 to March 2014 (6 months). It was a descriptive, hospi...

  11. The Science Case for the Planet Formation Imager (PFI)

    CERN Document Server

    Kraus, Stefan; Harries, Tim; Dong, Ruobing; Bate, Matthew; Whitney, Barbara; Zhu, Zhaohuan; Buscher, David; Berger, Jean-Philippe; Haniff, Chris; Ireland, Mike; Labadie, Lucas; Lacour, Sylvestre; Petrov, Romain; Ridgway, Steve; Surdej, Jean; Brummelaar, Theo ten; Tuthill, Peter; van Belle, Gerard

    2014-01-01

    Among the most fascinating and hotly-debated areas in contemporary astrophysics are the means by which planetary systems are assembled from the large rotating disks of gas and dust which attend a stellar birth. Although important work has already been, and is still being done both in theory and observation, a full understanding of the physics of planet formation can only be achieved by opening observational windows able to directly witness the process in action. The key requirement is then to probe planet-forming systems at the natural spatial scales over which material is being assembled. By definition, this is the so-called Hill Sphere which delineates the region of influence of a gravitating body within its surrounding environment. The Planet Formation Imager project (PFI) has crystallized around this challenging goal: to deliver resolved images of Hill-Sphere-sized structures within candidate planet-hosting disks in the nearest star-forming regions. In this contribution we outline the primary science case...

  12. The science case for the Planet Formation Imager (PFI)

    Science.gov (United States)

    Kraus, Stefan; Monnier, John; Harries, Tim; Dong, Ruobing; Bate, Matthew; Whitney, Barbara; Zhu, Zhaohuan; Buscher, David; Berger, Jean-Philippe; Haniff, Chris; Ireland, Mike; Labadie, Lucas; Lacour, Sylvestre; Petrov, Romain; Ridgway, Steve; Surdej, Jean; ten Brummelaar, Theo; Tuthill, Peter; van Belle, Gerard

    2014-07-01

    Among the most fascinating and hotly-debated areas in contemporary astrophysics are the means by which planetary systems are assembled from the large rotating disks of gas and dust which attend a stellar birth. Although important work has already been, and is still being done both in theory and observation, a full understanding of the physics of planet formation can only be achieved by opening observational windows able to directly witness the process in action. The key requirement is then to probe planet-forming systems at the natural spatial scales over which material is being assembled. By definition, this is the so-called Hill Sphere which delineates the region of influence of a gravitating body within its surrounding environment. The Planet Formation Imager project (PFI; http://www.planetformationimager.org) has crystallized around this challenging goal: to deliver resolved images of Hill-Sphere-sized structures within candidate planethosting disks in the nearest star-forming regions. In this contribution we outline the primary science case of PFI. For this purpose, we briefly review our knowledge about the planet-formation process and discuss recent observational results that have been obtained on the class of transition disks. Spectro-photometric and multi-wavelength interferometric studies of these systems revealed the presence of extended gaps and complex density inhomogeneities that might be triggered by orbiting planets. We present detailed 3-D radiation-hydrodynamic simulations of disks with single and multiple embedded planets, from which we compute synthetic images at near-infrared, mid-infrared, far-infrared, and sub-millimeter wavelengths, enabling a direct comparison of the signatures that are detectable with PFI and complementary facilities such as ALMA. From these simulations, we derive some preliminary specifications that will guide the array design and technology roadmap of the facility.

  13. 光声成像技术在生物医学中的研究进展%Development of Photoacoustic Imaging Technology in Biomedical Applications

    Institute of Scientific and Technical Information of China (English)

    常金凤; 李成; 李荧

    2014-01-01

    As a kind of nondestructive testing technology, photoacoustic imaging technology, which is characterized by high resolution and high contrast, has been one of the development directions in the field of biomedical technologies. From the view of photoacoustic imaging systems, photoacoustic detec-tors and image reconstruction algorithms, the photoacoustic imaging technology is analyzed in this paper. Then the current photoacoustic imaging systems are illustrated in accordance with photoacoustic com-puted tomography, photoacoustic microscopy and photoacoustic endoscopy. The research advance of pho-toacoustic detectors, relating to multi-elememnt probes, array probes, MEMS probes and diaphragm-type Fabry-Perot probes, is discussed. Also, the application characteristics of typical image reconstruction algorithms are compared. As a result, the major research orientations of the photoacoustic imaging tech-nology, including higher resolution, greater detective depth, hard real-time, miniaturization technology and low-cost design, are demonstrated in consideration of potential future applications.%光声成像是近年来发展较快的无损检测技术,其高分辨率、高对比度的特点使其成为生物医学检测技术的主要发展方向之一。文中从光声成像系统、光声探测器和图像重建算法的角度,对光声成像技术进行了分析。在此基础上,分别结合光声计算层析成像、光声显微成像和光声内窥成像对光声成像系统进行了阐述,探讨了光声探测器在多探头、阵列式、MEMS微型化和光纤F-P腔等方面的研究进展,比较了典型图像重建算法的应用特点,并指出了基于光声技术的生物医学无损成像系统的高分辨率、大探测深度、实时性强、小型化、低成本的研究方向。

  14. Full-Field and Single-Shot Full-Field Optical Coherence Tomography: A Novel Technique for Biomedical Imaging Applications

    OpenAIRE

    Hrebesh Molly Subhash

    2012-01-01

    Since its introduction, optical coherence tomography (OCT) technology has advanced dramatically in various field of both clinical and fundamental research. Full-field and Single-shot full-field OCT (FF-OCT and SS-FF-OCT) are alternative OCT concepts, which aims to improve the image acquisition speed and to simplify the optical setup of conventional point-scan OCT by realizing direct line field or full-field sample imaging onto an array or line detector such as CCD or CMOS camera. FF-OCT and ...

  15. Functionalized carbon nanotubes: biomedical applications

    Directory of Open Access Journals (Sweden)

    Vardharajula S

    2012-10-01

    Full Text Available Sandhya Vardharajula,1 Sk Z Ali,2 Pooja M Tiwari,1 Erdal Eroğlu,1 Komal Vig,1 Vida A Dennis,1 Shree R Singh11Center for NanoBiotechnology and Life Sciences Research, Alabama State University, Montgomery, AL, USA; 2Department of Microbiology, Osmania University, Hyderabad, IndiaAbstract: Carbon nanotubes (CNTs are emerging as novel nanomaterials for various biomedical applications. CNTs can be used to deliver a variety of therapeutic agents, including biomolecules, to the target disease sites. In addition, their unparalleled optical and electrical properties make them excellent candidates for bioimaging and other biomedical applications. However, the high cytotoxicity of CNTs limits their use in humans and many biological systems. The biocompatibility and low cytotoxicity of CNTs are attributed to size, dose, duration, testing systems, and surface functionalization. The functionalization of CNTs improves their solubility and biocompatibility and alters their cellular interaction pathways, resulting in much-reduced cytotoxic effects. Functionalized CNTs are promising novel materials for a variety of biomedical applications. These potential applications are particularly enhanced by their ability to penetrate biological membranes with relatively low cytotoxicity. This review is directed towards the overview of CNTs and their functionalization for biomedical applications with minimal cytotoxicity.Keywords: carbon nanotubes, cytotoxicity, functionalization, biomedical applications

  16. Spintronic platforms for biomedical applications.

    Science.gov (United States)

    Freitas, P P; Cardoso, F A; Martins, V C; Martins, S A M; Loureiro, J; Amaral, J; Chaves, R C; Cardoso, S; Fonseca, L P; Sebastião, A M; Pannetier-Lecoeur, M; Fermon, C

    2012-02-01

    Since the fundamental discovery of the giant magnetoresistance many spintronic devices have been developed and implemented in our daily life (e.g. information storage and automotive industry). Lately, advances in the sensors technology (higher sensitivity, smaller size) have potentiated other applications, namely in the biological area, leading to the emergence of novel biomedical platforms. In particular the investigation of spintronics and its application to the development of magnetoresistive (MR) biomolecular and biomedical platforms are giving rise to a new class of biomedical diagnostic devices, suitable for bench top bioassays as well as point-of-care and point-of-use devices. Herein, integrated spintronic biochip platforms for diagnostic and cytometric applications, hybrid systems incorporating magnetoresistive sensors applied to neuroelectronic studies and biomedical imaging, namely magneto-encephalography and magneto-cardiography, are reviewed. Also lab-on-a-chip MR-based platforms to perform biological studies at the single molecule level are discussed. Overall the potential and main characteristics of such MR-based biomedical devices, comparing to the existing technologies while giving particular examples of targeted applications, are addressed. PMID:22146898

  17. Lab-on-a-chip techniques, circuits, and biomedical applications

    CERN Document Server

    Ghallab, Yehya H

    2010-01-01

    Here's a groundbreaking book that introduces and discusses the important aspects of lab-on-a-chip, including the practical techniques, circuits, microsystems, and key applications in the biomedical, biology, and life science fields. Moreover, this volume covers ongoing research in lab-on-a-chip integration and electric field imaging. Presented in a clear and logical manner, the book provides you with the fundamental underpinnings of lab-on-a-chip, presents practical results, and brings you up to date with state-of-the-art research in the field. This unique resource is supported with over 160 i

  18. [Biomedical research in Revista de Biologia Tropical].

    Science.gov (United States)

    Gutiérrez, José María

    2002-01-01

    The contributions published in Revista de Biología Tropical in the area of Biomedical Sciences are reviewed in terms of number of contributions and scope of research subjects. Biomedical Sciences, particularly Parasitology and Microbiology, constituted the predominant subject in the Revista during the first decade, reflecting the intense research environment at the School of Microbiology of the University of Costa Rica and at Hospital San Juan de Dios. The relative weight of Biomedicine in the following decades diminished, due to the outstanding increment in publications in Biological Sciences; however, the absolute number of contributions in Biomedical Sciences remained constant throughout the last decades, with around 80 contributions per decade. In spite of the predominance of Parasitology as the main biomedical subject, the last decades have witnessed the emergence of new areas of interest in the Revista, such as Pharmacology of natural products, Toxinology, especially related to snake venoms, and Human Genetics. This retrospective analysis evidences that Biomedical Sciences, particularly those related to Tropical Medicine, were a fundamental component during the first years of Revista de Biología Tropical, and have maintained a significant presence in the scientific output of this journal, the most relevant scientific publication in biological sciences in Central America.

  19. The effects of gender stereotypic and counter-stereotypic textbook images on science performance.

    Science.gov (United States)

    Good, Jessica J; Woodzicka, Julie A; Wingfield, Lylan C

    2010-01-01

    We investigated the effect of gender stereotypic and counter-stereotypic images on male and female high school students' science comprehension and anxiety. We predicted stereotypic images to induce stereotype threat in females and impair science performance. Counter-stereotypic images were predicted to alleviate threat and enhance female performance. Students read one of three chemistry lessons, each containing the same text, with photograph content varied according to stereotype condition. Participants then completed a comprehension test and anxiety measure. Results indicate that female students had higher comprehension after viewing counter-stereotypic images (female scientists) than after viewing stereotypic images (male scientists). Male students had higher comprehension after viewing stereotypic images than after viewing counter-stereotypic images. Implications for alleviating the gender gap in science achievement are discussed. PMID:20397590

  20. Applications of Novel X-Ray Imaging Modalities in Food Science

    DEFF Research Database (Denmark)

    Nielsen, Mikkel Schou

    science for understanding and designing food products. In both of these aspects, X-ray imaging methods such as radiography and computed tomography provide a non-destructive solution. However, since the conventional attenuation-based modality suers from poor contrast in soft matter materials, modalities...... produces a contrast based on dierences in microstructure. In order to increase the use of X-ray imaging within food science, possible applications of X-ray phase-contrast and X-ray dark-eld imaging should be studied. To reach these applications, improvements are needed on several aspects of the imaging...... applications of novel X-ray imaging modalities within food science. The first two studies mainly concern the image acquisition process of taking the image. Using dark-eld radiography, raw, frozen and defrosted fruit were distinguished, and structural changes in barley seeds during germination were monitored...

  1. Brucellar spondylitis: evaluation by NMR imaging, CT and biomedical radiography - a case report; Espondilite por brucelose - relato de um caso

    Energy Technology Data Exchange (ETDEWEB)

    Campos, Juliana C. de; Marins, Jose Luiz C.; Pereira, Rubens Marcondes [Centro Radiologico, Campinas, SP (Brazil)

    1999-03-01

    A 50-year-old white woman presented with a 4-month history of low pain with lower extremity irradiation. Image studies showed inflammatory changes of the vertebral bodies and invertebral disk at L3-L4 level. Considering she had no previous spinal surgery, negative tests for tuberculosis and a positive history of exposure to brucellosis, further studies were done, and the serologic tests were positive for brucellar antibodies. Follow-up studies within the first two months demonstrated the progressive spinal changes in brucellar spondylitis. (author)

  2. From Science History and Applications Developments of Life System to Bio-Imaging Technology

    Institute of Scientific and Technical Information of China (English)

    YAN Li-min; LOU Wei; HE Guo-sen

    2004-01-01

    This paper presents brief science history and application developments of imaging technology,and discusses the bio-imaging technology. Real-time image measurement techniques and parallel processing of a realistic example is given. Finally coming converging technology of nano-bio-Info-cgno (NBIC) is extended for future trend.

  3. Statistics in biomedical research

    Directory of Open Access Journals (Sweden)

    González-Manteiga, Wenceslao

    2007-06-01

    Full Text Available The discipline of biostatistics is nowadays a fundamental scientific component of biomedical, public health and health services research. Traditional and emerging areas of application include clinical trials research, observational studies, physiology, imaging, and genomics. The present article reviews the current situation of biostatistics, considering the statistical methods traditionally used in biomedical research, as well as the ongoing development of new methods in response to the new problems arising in medicine. Clearly, the successful application of statistics in biomedical research requires appropriate training of biostatisticians. This training should aim to give due consideration to emerging new areas of statistics, while at the same time retaining full coverage of the fundamentals of statistical theory and methodology. In addition, it is important that students of biostatistics receive formal training in relevant biomedical disciplines, such as epidemiology, clinical trials, molecular biology, genetics, and neuroscience.La Bioestadística es hoy en día una componente científica fundamental de la investigación en Biomedicina, salud pública y servicios de salud. Las áreas tradicionales y emergentes de aplicación incluyen ensayos clínicos, estudios observacionales, fisología, imágenes, y genómica. Este artículo repasa la situación actual de la Bioestadística, considerando los métodos estadísticos usados tradicionalmente en investigación biomédica, así como los recientes desarrollos de nuevos métodos, para dar respuesta a los nuevos problemas que surgen en Medicina. Obviamente, la aplicación fructífera de la estadística en investigación biomédica exige una formación adecuada de los bioestadísticos, formación que debería tener en cuenta las áreas emergentes en estadística, cubriendo al mismo tiempo los fundamentos de la teoría estadística y su metodología. Es importante, además, que los estudiantes de

  4. Design and realisation of integrated circuits for the readout of pixel sensors in high-energy physics and biomedical imaging

    Energy Technology Data Exchange (ETDEWEB)

    Peric, I.

    2004-08-01

    Radiation tolerant pixel-readout chip for the ATLAS pixel detector has been designed, implemented in a deep-submicron CMOS technology and successfully tested. The chip contains readout-channels with complex analog and digital circuits. Chip for steering of the DEPFET active-pixel matrix has been implemented in a high-voltage CMOS technology. The chip contains channels which generate fast sequences of high-voltage signals. Detector containing this chip has been successfully tested. Pixel-readout test chip for an X-ray imaging pixel sensor has been designed, implemented in a CMOS technology and tested. Pixel-readout channels are able to simultaneously count the signals generated by passage of individual photons and to sum the total charge generated during exposure time. (orig.)

  5. Biomedical wellness challenges and opportunities

    Science.gov (United States)

    Tangney, John F.

    2012-06-01

    The mission of ONR's Human and Bioengineered Systems Division is to direct, plan, foster, and encourage Science and Technology in cognitive science, computational neuroscience, bioscience and bio-mimetic technology, social/organizational science, training, human factors, and decision making as related to future Naval needs. This paper highlights current programs that contribute to future biomedical wellness needs in context of humanitarian assistance and disaster relief. ONR supports fundamental research and related technology demonstrations in several related areas, including biometrics and human activity recognition; cognitive sciences; computational neurosciences and bio-robotics; human factors, organizational design and decision research; social, cultural and behavioral modeling; and training, education and human performance. In context of a possible future with automated casualty evacuation, elements of current science and technology programs are illustrated.

  6. Biomedical technology

    CERN Document Server

    Wriggers, Peter

    2015-01-01

    During the last years computational methods lead to new approaches that can be applied within medical practice. Based on the tremendous advances in medical imaging and high-performance computing, virtual testing is able to help in medical decision processes or implant designs. Current challenges in medicine and engineering are related to the application of computational methods to clinical medicine and the study of biological systems at different scales. Additionally manufacturers will be able to use computational tools and methods to predict the performance of their medical devices in virtual patients. The physical and animal testing procedures could be reduced by virtual prototyping of medical devices. Here simulations can enhance the performance of alternate device designs for a range of virtual patients. This will lead to a refinement of designs and to safer products. This book summarizes different aspects of approaches to enhance function, production, initialization and complications of different types o...

  7. Biomedical engineering fundamentals

    CERN Document Server

    Bronzino, Joseph D

    2014-01-01

    Known as the bible of biomedical engineering, The Biomedical Engineering Handbook, Fourth Edition, sets the standard against which all other references of this nature are measured. As such, it has served as a major resource for both skilled professionals and novices to biomedical engineering.Biomedical Engineering Fundamentals, the first volume of the handbook, presents material from respected scientists with diverse backgrounds in physiological systems, biomechanics, biomaterials, bioelectric phenomena, and neuroengineering. More than three dozen specific topics are examined, including cardia

  8. Geostationary Imaging Fourier Transform Spectrometer (GIFTS): science applications

    Science.gov (United States)

    Smith, W. L.; Revercomb, H. E.; Zhou, D. K.; Bingham, G. E.; Feltz, W. F.; Huang, H. L.; Knuteson, R. O.; Larar, A. M.; Liu, X.; Reisse, R.; Tobin, D. C.

    2006-12-01

    A revolutionary satellite weather forecasting instrument, called the "GIFTS" which stands for the "Geostationary Imaging Fourier Transform Spectrometer", was recently completed and successfully tested in a space chamber at the Utah State University's Space Dynamics Laboratory. The GIFTS was originally proposed by the NASA Langley Research Center, the University of Wisconsin, and the Utah State University and selected for flight demonstration as NASA's New Millennium Program (NMP) Earth Observing-3 (EO-3) mission, which was unfortunately cancelled in 2004. GIFTS is like a digital 3-d movie camera that, when mounted on a geostationary satellite, would provide from space a revolutionary four-dimensional view of the Earth's atmosphere. GIFTS will measure the distribution, change, and movement of atmospheric moisture, temperature, and certain pollutant gases, such as carbon monoxide and ozone. The observation of the convergence of invisible water vapor, and the change of atmospheric temperature, provides meteorologists with the observations needed to predict where, and when, severe thunderstorms, and possibly tornados, would occur, before they are visible on radar or in satellite cloud imagery. The ability of GIFTS to observe the motion of moisture and clouds at different altitudes enables atmospheric winds to be observed over vast, and otherwise data sparse, oceanic regions of the globe. These wind observations would provide the means to greatly improve the forecast of where tropical storms and hurricanes will move and where and when they will come ashore (i.e., their landfall position and time). GIFTS, if flown into geostationary orbit, would provide about 80,000 vertical profiles per minute, each one like a low vertical resolution (1-2km) weather balloon sounding, but with a spacing of 4 km. GIFTS is a revolutionary atmospheric sensing tool. A glimpse of the science measurement capabilities of GIFTS is provided through airborne measurements with the NPOESS Airborne

  9. Applications of computational intelligence in biomedical technology

    CERN Document Server

    Majernik, Jaroslav; Pancerz, Krzysztof; Zaitseva, Elena

    2016-01-01

    This book presents latest results and selected applications of Computational Intelligence in Biomedical Technologies. Most of contributions deal with problems of Biomedical and Medical Informatics, ranging from theoretical considerations to practical applications. Various aspects of development methods and algorithms in Biomedical and Medical Informatics as well as Algorithms for medical image processing, modeling methods are discussed. Individual contributions also cover medical decision making support, estimation of risks of treatments, reliability of medical systems, problems of practical clinical applications and many other topics  This book is intended for scientists interested in problems of Biomedical Technologies, for researchers and academic staff, for all dealing with Biomedical and Medical Informatics, as well as PhD students. Useful information is offered also to IT companies, developers of equipment and/or software for medicine and medical professionals.  .

  10. Biomedical Plasmonics

    Science.gov (United States)

    Halas, Naomi

    2010-03-01

    The near infrared region of the optical spectrum provides a window into the human body that can be exploited for diagnostics and therapeutics, offering an opportunity to merge these concepts. We have shown that the strong light-absorbing and light-scattering properties of noble metal nanoparticles can be controlled by manipulating their shape: in a core-shell geometry, the metallic shell layer can be easily tuned to this spectral region. This `nanoshell' geometry has proven to be ideal for enhancing both diagnostic and therapeutic modalities for cancer. Nanoshells can serve as light scattering beacons, strong enhancers of fluorescent markers for optical tomography, and impart a highly effective, targeted therapeutic response via their unparalleled light-to-heat conversion properties. This latter effect has been used to induce cell death and tumor remission in animals at greater than 90% efficacy, and is currently in clinical trials. This nanoparticle platform can be combined with MRI contrast agents for the enhancement of dual imaging modalities, and also shows promise as a light-controlled nonviral vector for intracellular gene delivery.

  11. `Am I Like a Scientist?': Primary children's images of doing science in school

    Science.gov (United States)

    Zhai, Junqing; Jocz, Jennifer Ann; Tan, Aik-Ling

    2014-03-01

    A considerable body of evidence highlights how inquiry-based science can enhance students' epistemic and conceptual understanding of scientific concepts, principles, and theories. However, little is known about how students view themselves as learners of science. In this paper, we explore primary children's images of doing science in school and how they compare themselves with 'real' scientists. Data were collected through the use of a questionnaire, drawing activity, and interviews from 161 Grade 4 (ages 9-10) students in Singapore. Results indicate that 'doing science as conducting hands-on investigations', 'doing science as learning from the teacher', 'doing science as completing the workbook', and 'doing science as a social process' are the images of learning science in school that most of the students held. In addition, students reported that they need to be well behaved first and foremost, while scientists are more likely to work alone and do things that are dangerous. Moreover, students often viewed themselves as 'acting like a scientist' in class, especially when they were doing experiments. Nevertheless, some students reported that they were unlike a scientist because they believed that scientists work alone with dangerous experiments and do not need to listen to the teacher and complete the workbook. These research findings further confirm the earlier argument that young children can make distinctions between school science and 'real' science. This study suggests that the teaching of science as inquiry and by inquiry will shape how students view their classroom experiences and their attitudes towards science.

  12. The InfraRed Imaging Spectrograph (IRIS) for TMT: latest science cases and simulations

    CERN Document Server

    Wright, Shelley A; Do, Tuan; Marshall, Daniel; Larkin, James E; Moore, Anna M; Adamkovics, Mate; Andersen, David; Armus, Lee; Barth, Aaron; Cote, Patrick; Cooke, Jeff; Chisholm, Eric M; Davidge, Timothy; Dunn, Jennifer S; Dumas, Christophe; Ellerbroeck, Brent L; Ghez, Andrea M; Hao, Lei; Hayano, Yutaka; Liu, Michael; Lopez-Rodriguez, Enrique; Lu, Jessica R; Mao, Shude; Marois, Christian; Pandey, Shashi B; Philips, Andrew C; Schoeck, Matthias; Subramaniam, Annapurni; Subramanian, Smitha; Suzuki, Ryuji; Tan, Jonathan C; Terai, Tsuyoshi; Treu, Tommaso; Simard, Luc; Weiss, Jason L; Wincensten, James; Wong, Michael; Zhang, Kai

    2016-01-01

    The Thirty Meter Telescope (TMT) first light instrument IRIS (Infrared Imaging Spectrograph) will complete its preliminary design phase in 2016. The IRIS instrument design includes a near-infrared (0.85 - 2.4 micron) integral field spectrograph (IFS) and imager that are able to conduct simultaneous diffraction-limited observations behind the advanced adaptive optics system NFIRAOS. The IRIS science cases have continued to be developed and new science studies have been investigated to aid in technical performance and design requirements. In this development phase, the IRIS science team has paid particular attention to the selection of filters, gratings, sensitivities of the entire system, and science cases that will benefit from the parallel mode of the IFS and imaging camera. We present new science cases for IRIS using the latest end-to-end data simulator on the following topics: Solar System bodies, the Galactic center, active galactic nuclei (AGN), and distant gravitationally-lensed galaxies. We then briefl...

  13. Abstract Proceedings Signal and Imaging Sciences Workshop CASIS Workshop 2006

    Energy Technology Data Exchange (ETDEWEB)

    Roberts, R

    2006-11-07

    These abstracts cover the following topics: (1) Analysis of massive datasets; (2) Nondestructive evaluation; (3) Imaging methodology; (4) NIF optics inspection; (5) Model-based signal processing and estimation; and (6) Image processing and analysis.

  14. Clay Mineral Image Collection for Education in Geotechnical Engineering and the Earth Sciences

    OpenAIRE

    Stone, Gordon; Dove, Joseph E.; Han, Nizhou; Dove, Patricia

    2015-01-01

    This file contains a collection of scanning electron microscope images of Kaolinite and Bentonite pure clay minerals, and the fine portion of a natural soil. National Science Foundation Grant No. 1301124

  15. The Mars Hand Lens Imager (MAHLI) for the 209 Mars Science Laboratory

    Science.gov (United States)

    Edgett, K. S.; Bell, J. F., III; Herkenhoff, K. E.; Heydari, E.; Kah, L. C.; Minitti, M. E.; Olson, T. S.; Rowland, S. K.; Schieber, J.; Sullivan, R. J.

    2005-01-01

    The MArs Hand Lens Imager (MAHLI) is a small, RGB-color camera designed to examine geologic material at 12.5-75 microns/pixel resolution at the Mars Science Laboratory (MSL) landing site. MAHLI is a PI-led investigation competitively selected by NASA in December 2004 as part of the science payload for the MSL rover launching in 2009. The instrument is being fabricated by, and will be operated by, Malin Space Science Systems of San Diego, California.

  16. 15th International Conference on Biomedical Engineering

    CERN Document Server

    2014-01-01

    This volume presents the proceedings of the 15th ICMBE held from 4th to 7th December 2013, Singapore. Biomedical engineering is applied in most aspects of our healthcare ecosystem. From electronic health records to diagnostic tools to therapeutic, rehabilitative and regenerative treatments, the work of biomedical engineers is evident. Biomedical engineers work at the intersection of engineering, life sciences and healthcare. The engineers would use principles from applied science including mechanical, electrical, chemical and computer engineering together with physical sciences including physics, chemistry and mathematics to apply them to biology and medicine. Applying such concepts to the human body is very much the same concepts that go into building and programming a machine. The goal is to better understand, replace or fix a target system to ultimately improve the quality of healthcare. With this understanding, the conference proceedings offer a single platform for individuals and organisations working i...

  17. Image Processing: A State-of-the-Art Way to Learn Science.

    Science.gov (United States)

    Raphael, Jacqueline; Greenberg, Richard

    1995-01-01

    Teachers participating in the Image Processing for Teaching Process, begun at the University of Arizona's Lunar and Planetary Laboratory in 1989, find this technology ideal for encouraging student discovery, promoting constructivist science or math experiences, and adapting in classrooms. Because image processing is not a computerized text, it…

  18. The Potential Improvement of Team-Working Skills in Biomedical and Natural Science Students Using a Problem-Based Learning Approach

    Science.gov (United States)

    Nowrouzian, Forough L.; Farewell, Anne

    2013-01-01

    Teamwork has become an integral part of most organisations today, and it is clearly important in Science and other disciplines. In Science, research teams increase in size while the number of single-authored papers and patents decline. Team-work in laboratory sciences permits projects that are too big or complex for one individual to be tackled.…

  19. VI Latin American Congress on Biomedical Engineering

    CERN Document Server

    Hadad, Alejandro

    2015-01-01

    This volume presents the proceedings of the CLAIB 2014, held in Paraná, Entre Ríos, Argentina 29, 30 & 31 October 2014. The proceedings, presented by the Regional Council of Biomedical Engineering for Latin America (CORAL) offer research findings, experiences and activities between institutions and universities to develop Bioengineering, Biomedical Engineering and related sciences. The conferences of the American Congress of Biomedical Engineering are sponsored by the International Federation for Medical and Biological Engineering (IFMBE), Society for Engineering in Biology and Medicine (EMBS) and the Pan American Health Organization (PAHO), among other organizations and international agencies and bringing together scientists, academics and biomedical engineers in Latin America and other continents in an environment conducive to exchange and professional growth. The Topics include: - Bioinformatics and Computational Biology - Bioinstrumentation; Sensors, Micro and Nano Technologies - Biomaterials, Tissu...

  20. Images - RPSD | LSDB Archive [Life Science Database Archive metadata

    Lifescience Database Archive (English)

    Full Text Available ures of the proteins of plant seven kinds, such as rice. Data file File name: rpsd_images.zip File URL: ftp:...//ftp.biosciencedbc.jp/archive/rpsd/LATEST/rpsd_images.zip File size: 18.3 MB Sim